BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005084
(715 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356541275|ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
Length = 967
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/721 (65%), Positives = 563/721 (78%), Gaps = 30/721 (4%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+++FH+HII ELL++ NGGLV+LSSGL+L KLIAS+L+LHS SQGTLLLLS S
Sbjct: 1 MVQFHEHIITELLEDSNGGLVVLSSGLALSKLIASLLILHSSSQGTLLLLSPSSTSLKSK 60
Query: 62 IHY----LAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
I + L P +P+EITADL A HRH LY+SG FF+TPRILIVDLLT +LPTS +A
Sbjct: 61 ITFHLKTLNPQFYQIPAEITADLHAPHRHALYTSGNAFFITPRILIVDLLTNKLPTSKIA 120
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
G+IILN H+L+E STE FI RI +SLNR AY+RAFSDKP AMVSGFAK ER MK L +RK
Sbjct: 121 GIIILNAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDKPHAMVSGFAKAERTMKCLHVRK 180
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE 237
LHLWPRFQV VS+ELER+PP VVD+RVPMS+YM GIQKAI+EVMDACLKEMRKTNKVDVE
Sbjct: 181 LHLWPRFQVYVSQELERDPPEVVDIRVPMSRYMVGIQKAIVEVMDACLKEMRKTNKVDVE 240
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DLTVENGLFKSFDEI+RRQLDPIWH LGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL
Sbjct: 241 DLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 300
Query: 298 DTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
DTLRVSESFRSVWIFAE+SYKIFDYAKKRV+ R+DGV+ N SKSV KKR+ K D
Sbjct: 301 DTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRADGVKFNESSKSVKNKKRRTKGDDK 360
Query: 358 NEDEDGGTSSTSTK--VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
+ +E GTSS+S+ ++LEEVLEEAPKWKVLR VLEE+EEER KQ REEVL +GE+
Sbjct: 361 DIEEVDGTSSSSSNAGLILEEVLEEAPKWKVLRNVLEEVEEERQKQGMLREEVLAEGEDT 420
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPK 475
++GIVLVACKDE SC+QLE+CI NG +KVM EEW+KYLL+KVQLR + KK K +PK
Sbjct: 421 NNGIVLVACKDERSCLQLEECITNGPKKVMHEEWKKYLLNKVQLRDIVNKKKKPKDPKPK 480
Query: 476 GYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD--GDNPETYYGSKGP 533
G+GILDGV P+K Q+AE +S+SKQEHDALLAAASK+RN ++D D P+ G +G
Sbjct: 481 GFGILDGVTPIKPVQSAETTSISKQEHDALLAAASKLRNIAENDHVGEDTPQPDSGGQGR 540
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
+ + K RN P + S ++ +N + DK +S S N+ DE + G
Sbjct: 541 AKRKRKVGIRNDPVILDGSGVQN--NNKAQSTSDKIGMSDSKNKIDEDETNPISAG---- 594
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDM 653
F E T ++++ K +PPV+FYALESDQPILDILKP +++VYHPDM
Sbjct: 595 ----RFCE------------TMQARNGKSLPPVYFYALESDQPILDILKPSIVIVYHPDM 638
Query: 654 SFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
+FVR+IEVYKAENPS +LKVYF+FYEDS+EVQKF+A IRRENGAFESLIRQKS MMIP+D
Sbjct: 639 TFVREIEVYKAENPSKRLKVYFIFYEDSSEVQKFEASIRRENGAFESLIRQKSLMMIPVD 698
Query: 714 Q 714
Q
Sbjct: 699 Q 699
>gi|449461269|ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
Length = 1003
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/747 (64%), Positives = 577/747 (77%), Gaps = 44/747 (5%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN----L 57
+++FH+HII ELL++ NGGLVI+SSGL+L KL++S+L LHSPSQGTLLL+S S + L
Sbjct: 1 MVQFHEHIITELLEDSNGGLVIISSGLNLAKLVSSLLFLHSPSQGTLLLVSPSSHSQLSL 60
Query: 58 KSQIIHYLAPNA--PL-LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
KSQI+ YL + PL PSEI+ADLPA+HR +LYSSG FFVTPRILIVDLLT +LPTS
Sbjct: 61 KSQILFYLNRHQSDPLTFPSEISADLPAHHRLSLYSSGSSFFVTPRILIVDLLTHKLPTS 120
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
N+AGLIILN H+L+E STE FI RII+S NR AY+R FSDKP AMVSGFAK ERIMK L+
Sbjct: 121 NIAGLIILNAHSLSETSTEAFIVRIIRSHNRNAYVRVFSDKPHAMVSGFAKAERIMKCLY 180
Query: 175 IRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV 234
+R+LHLWPRFQVNVSEELER PP VVD+RVPM+KYM GIQKAI+EVMDACLKEMRKTNKV
Sbjct: 181 VRRLHLWPRFQVNVSEELERNPPDVVDIRVPMTKYMVGIQKAIIEVMDACLKEMRKTNKV 240
Query: 235 DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294
DVEDLTVENGLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLVRYDAVT+L
Sbjct: 241 DVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVTFL 300
Query: 295 KYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKK 354
KYLDTLRVSESFRSVWIFAESSYKIF+YAKKRVYRF R+DG ++ Q K V GK++K K
Sbjct: 301 KYLDTLRVSESFRSVWIFAESSYKIFEYAKKRVYRFVRADGSKIIEQGKGVVGKRKKSKG 360
Query: 355 VDNNEDEDGG--TSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG 412
DN E+ED +S T++ +VL EVLEEAPKWKVLRE+LEEIEEER K+ S EE LL+
Sbjct: 361 DDNTEEEDVCQLSSGTTSGIVLTEVLEEAPKWKVLREILEEIEEERQKRLSEGEENLLES 420
Query: 413 EENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
+++ GIVLVACKDE SCMQLE+CI N + V+REEWE YLL+K+QLR ++ +KKK K
Sbjct: 421 DKDSSGIVLVACKDERSCMQLEECIMNNPQMVLREEWENYLLNKIQLRDMKPHNKKKH-K 479
Query: 473 EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG--DNPETYYGS 530
+PKG+G+LDGV P+ AQNAEASS +KQE +ALLAAAS+IRN+ K+D ++ + S
Sbjct: 480 DPKGFGVLDGVVPITPAQNAEASSFNKQERNALLAAASEIRNRAKNDSAVVEDQQNDMDS 539
Query: 531 KGPGRGRGKGRNRNGPAC--------------------VPQSANKDSKS--NSKAAIEDK 568
G+ KGR+R GP V S N K+ N KA + DK
Sbjct: 540 TEQATGKRKGRSRKGPDVDNIGYAKGKKKVLNKKGSVDVGDSNNSKDKNVGNQKAPVNDK 599
Query: 569 PEISGSGNEGPADEIHSGVV-GYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVH 627
E S SG E +EI+ G + G+S T E + +R + +K +PPV
Sbjct: 600 VEASVSGCEDQMNEINPGALDGFSEATCSTPPSEPGERKQR---------QQTKLLPPVQ 650
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
FYALESDQPILD L+P +I+ YHPD++FVRQIEVYKAENP+ LKVYFLFY+DSTEVQKF
Sbjct: 651 FYALESDQPILDTLEPSIIIAYHPDVTFVRQIEVYKAENPTKHLKVYFLFYDDSTEVQKF 710
Query: 688 KAGIRRENGAFESLIRQKSFMMIPIDQ 714
+A IRREN AFESLIRQKS MMIP+DQ
Sbjct: 711 QASIRRENSAFESLIRQKSLMMIPVDQ 737
>gi|357482211|ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1 [Medicago truncatula]
Length = 984
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/725 (66%), Positives = 575/725 (79%), Gaps = 20/725 (2%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
MVL+FH+HII ELL++ NGGL ILSSGLSL KLI+S+LLLHS SQGTLL+LS SP LKS+
Sbjct: 1 MVLQFHEHIITELLEDTNGGLTILSSGLSLSKLISSLLLLHSSSQGTLLILSPSPTLKSK 60
Query: 61 I---IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
I + L P +P+EITADLP NHRH+LYSSG + F+TPRILIVDLLT +LPTS ++
Sbjct: 61 INFHLKTLNPQLHQIPTEITADLPVNHRHSLYSSGHVCFITPRILIVDLLTNKLPTSTIS 120
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
G++ILN H+++E STE FI RI +S NR+AY+RAFSD+P AMVSGFAK ER MK L +RK
Sbjct: 121 GMLILNAHSISETSTEAFIVRIFRSFNRDAYVRAFSDRPQAMVSGFAKAERTMKCLGLRK 180
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE 237
LHLWPRFQV VS+ELER+PP VVD+RVPM+KYM GIQKAI+EVMDACLKEMRKTNKVDVE
Sbjct: 181 LHLWPRFQVYVSQELERDPPDVVDIRVPMTKYMVGIQKAIVEVMDACLKEMRKTNKVDVE 240
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DLTVENGLFKSFDEI+RRQLDPIWH LGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL
Sbjct: 241 DLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 300
Query: 298 DTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
DTLRVSESFRSVWIFAE+SYKIFDYAKKRVY RSDGV+LN SK+V KK+K K +
Sbjct: 301 DTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGVKLNESSKNVKNKKKKAKGDNE 360
Query: 358 NEDEDGGTSSTSTK--VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
+ +E T+STS+ +VLEEVLEEAPKWKVLR++LEE+EEER KQ REEVL +GE+
Sbjct: 361 DTEEADVTASTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERRKQGILREEVLAEGEDT 420
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPK 475
D+GIVLVACKDE SC+QLE+CI N +KVM++EW+KYLL+KVQLR V KKKK K+PK
Sbjct: 421 DNGIVLVACKDERSCLQLEECITNNPKKVMQDEWKKYLLNKVQLRDV--VHKKKKPKDPK 478
Query: 476 GYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD--GDNPETYYGSKGP 533
G+GIL+GV P+ +AQN E ++KQEHDALLAAASK+RN + + D P++ G
Sbjct: 479 GFGILNGVTPISLAQNTETGGINKQEHDALLAAASKLRNLAEKNHVVEDTPQSDLGGHVR 538
Query: 534 GRGRGKGRNRNGPACVP----QSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVG 589
G+G+ K NRNGP + QS NK+ ++ K + D + G
Sbjct: 539 GKGKRKLGNRNGPIIIDGSGVQSNNKEEVTSGKTGMSDSKNKAHMGETSAVSTDRVCETK 598
Query: 590 YSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVY 649
+ G ++ A + +R D A ++D KP+PPVHFYALESDQPILDILKP +IVVY
Sbjct: 599 HGGISVDDAVL------RRHTFPD-AMARDGKPLPPVHFYALESDQPILDILKPSIIVVY 651
Query: 650 HPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMM 709
HPDM+FVR+IEVYKAENPS +LKVYF+FYEDSTEVQKF+A IRRENGAFESLIRQKS MM
Sbjct: 652 HPDMTFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMM 711
Query: 710 IPIDQ 714
IPIDQ
Sbjct: 712 IPIDQ 716
>gi|224138752|ref|XP_002326681.1| predicted protein [Populus trichocarpa]
gi|222834003|gb|EEE72480.1| predicted protein [Populus trichocarpa]
Length = 982
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/731 (67%), Positives = 575/731 (78%), Gaps = 22/731 (3%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+++FH+HII +LL++P GGLVILSSGLSLPKL++S+L LHSPSQGTLL+ S P LKS I
Sbjct: 1 MVQFHEHIITDLLEDPAGGLVILSSGLSLPKLVSSLLSLHSPSQGTLLIFSPPPTLKSLI 60
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+H+ N P EITADLP++HR +LYSSGQI F+TPRILIVDLL+ ++PTS+LAGLII
Sbjct: 61 LHHHNTNPN--PIEITADLPSHHRLSLYSSGQICFITPRILIVDLLSNKIPTSSLAGLII 118
Query: 122 LNTHALTENSTETFICRIIKS--LNREA------YIRAFSDKPTAMVSGFAKTERIMKSL 173
LN H+++E STE FI RI+KS NR YIRAFSD+P AMVSGF KTER+MK L
Sbjct: 119 LNAHSISETSTEAFIVRILKSSTQNRNQNNSNVFYIRAFSDRPQAMVSGFCKTERLMKCL 178
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
FIR+LHLWPRFQV VS+ELE++PP VVDVRVPMSKYM GIQKAILEVMDACLKE+RK+NK
Sbjct: 179 FIRRLHLWPRFQVYVSQELEKDPPEVVDVRVPMSKYMVGIQKAILEVMDACLKEVRKSNK 238
Query: 234 VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
VDVEDLTVENGLFKSFDEI+RRQLDPIWH LGKKTKQLVSDLKTLRKLLDYLVRYDAV+Y
Sbjct: 239 VDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSY 298
Query: 294 LKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLK 353
LKYLDTLRVS+SF+SVWIFAE SYKIFDYAKKRV+R TRS V+LN QSK+ GKKRKLK
Sbjct: 299 LKYLDTLRVSQSFQSVWIFAEPSYKIFDYAKKRVFRLTRSSDVKLNEQSKNKVGKKRKLK 358
Query: 354 KVDNNEDEDGGTSSTSTK--VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
D+NE E GTSS++T VVLEEVLEEAPKWKVLRE+LEEI EER ++ S EE ++
Sbjct: 359 GDDSNEGEADGTSSSTTSSGVVLEEVLEEAPKWKVLREILEEIGEER-QRVESGEEDQVE 417
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV---QTSSKK 468
E D+GIVLVACKDECSCMQLEDCI + KV++EEW+KYLLSKV+L + + K
Sbjct: 418 SEGVDNGIVLVACKDECSCMQLEDCIMHSPRKVLQEEWKKYLLSKVELGGLPAPEKKKAK 477
Query: 469 KKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKS----DDGDNP 524
K KEPKG+GILDGV PV Q+AEASS +KQEHD LL AASKIRNQ K +D P
Sbjct: 478 LKPKEPKGFGILDGVVPVTTVQSAEASSTNKQEHDVLLVAASKIRNQYKRGLVVEDELQP 537
Query: 525 ETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIH 584
SK + +GK + G A S +KD+ SN I+D PEISGS N+ E
Sbjct: 538 -LADSSKKGAKEKGKEHKKRGQATGQDSGSKDNDSNIDTVIKDLPEISGSKNKSQTVEND 596
Query: 585 SGVV-GYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKP 643
+ GY L+ A V K + + + S+++KP+PPVHF+ALESDQPILDILKP
Sbjct: 597 QAAIDGYYEANLQRASVNKGALQRHAEELGLTGSRNAKPIPPVHFHALESDQPILDILKP 656
Query: 644 FVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIR 703
V++VYHPDM FVR+IEVYKAENPS KLKVYF+FYEDSTEVQKF+A IRRENGAFESLIR
Sbjct: 657 SVVIVYHPDMMFVREIEVYKAENPSKKLKVYFIFYEDSTEVQKFEASIRRENGAFESLIR 716
Query: 704 QKSFMMIPIDQ 714
QKS MMIP+DQ
Sbjct: 717 QKSLMMIPVDQ 727
>gi|8926611|gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis thaliana]
Length = 956
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/727 (62%), Positives = 555/727 (76%), Gaps = 52/727 (7%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSS--SPNLK 58
M L++HQ II++LL++ NGGLVILSSGLSL KLIAS+L+LHSPSQGTLLLL S + +LK
Sbjct: 1 MALKYHQQIISDLLEDSNGGLVILSSGLSLAKLIASLLILHSPSQGTLLLLLSPAAQSLK 60
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S+IIHY++ P+EITADLPAN R++LY+SG FF+TPRILIVDLLTQR+P S LAG
Sbjct: 61 SRIIHYISSLDSPTPTEITADLPANQRYSLYTSGSPFFITPRILIVDLLTQRIPVSALAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ ILN H+++E STE FI RI+KSLN AYIRAFSD+P AMVSGFAKTER M++LF+RK+
Sbjct: 121 IFILNAHSISETSTEAFIIRIVKSLNGSAYIRAFSDRPQAMVSGFAKTERTMRALFLRKI 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQ++VS+ELEREPP VVD+RV MS YM GIQKAI+EVMDACLKEM+KTNKVDV+D
Sbjct: 181 HLWPRFQLDVSQELEREPPEVVDIRVSMSNYMVGIQKAIIEVMDACLKEMKKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE+GLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLVRYDAV++LK+LD
Sbjct: 241 LTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVSFLKFLD 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
TLRVSES+RSVW+FAESSYKIFD+AKKRVYR ++ V+ K+ +GKKR K ++
Sbjct: 301 TLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNSKGETDS 360
Query: 359 EDEDGGTSST--STKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ GG ++T +T VV+EEVLEEAPKWKVLRE+LEE +EERLKQA S E+ ++
Sbjct: 361 VEAVGGETATNVATGVVVEEVLEEAPKWKVLREILEETQEERLKQAFSEED-----NSDN 415
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
+GIVLVACKDE SCMQLEDCI N +KVMREEWE YLLSK++LRS+QT KKK+ KG
Sbjct: 416 NGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKIELRSMQTPQKKKQKTP-KG 474
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD----GDNPETYYGSKG 532
+GILDGV PV QN+E SSV +QEH+AL+AAAS IR GK+ D +NPE +
Sbjct: 475 FGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTTDMASGNNNPEPHVDKAS 534
Query: 533 PGRGRGK----GRNRNGPACVPQSANKDSKSNSKAAIEDKPEI-SGSGNEGPADEIHSGV 587
+G+ K R+ +C ++AN KPEI G NE A+E +
Sbjct: 535 CTKGKAKKDLTSLQRSLRSCNKKTAN------------SKPEILPGPENEEKANEASTSA 582
Query: 588 VGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIV 647
+ + +K +PPVHFYALESDQPILDILKP VI+
Sbjct: 583 ---------------------PQEANAVRPSGAKKLPPVHFYALESDQPILDILKPSVII 621
Query: 648 VYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSF 707
VYHPDM FVR++EVYKAENP KLKVYF+FY++STEVQKF+A IRREN AFESLIRQKS
Sbjct: 622 VYHPDMGFVRELEVYKAENPLRKLKVYFIFYDESTEVQKFEASIRRENEAFESLIRQKSS 681
Query: 708 MMIPIDQ 714
M+IP+DQ
Sbjct: 682 MIIPVDQ 688
>gi|359497108|ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
Length = 964
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/719 (66%), Positives = 567/719 (78%), Gaps = 29/719 (4%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+++FH+HII ELL++ NGGLV+LSSGL LPKLI+S+LLLH PSQG+LLLLSSSP+ K I
Sbjct: 1 MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI 60
Query: 62 IHYL---APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+++L P LPSEITADLPA+HRH+LY+SG +FF+T RILIVDLLT R+PTS +AG
Sbjct: 61 LYHLDANPNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGIAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
LIILN H+L+E TE FI RII+SLN AY+RAFSDKP AMVSGFAK ERIMK LF+R+L
Sbjct: 121 LIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLRRL 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQV+VS+ELER PPVVVD+RVPM+ +M GIQKAI+EV+DACLKEMRKTNKVDV+D
Sbjct: 181 HLWPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEMRKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVENGLFKSFDEI+RRQLDPIWH LGKKTKQLVSDLKTLRKLLDYLVRYDAV+YLKYLD
Sbjct: 241 LTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKYLD 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
+LR SE+ RSVWIFAESSYKIF+YAKKRVY F RSDG +L GQ+KSVT KKRKL N
Sbjct: 301 SLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNNNKNE 360
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
+ D T+ VVLEEVLEE+PKWKVLREVL+EIEEER +QASSRE+ +G+E+D G
Sbjct: 361 ANGDSVLVGTNGGVVLEEVLEESPKWKVLREVLKEIEEEREQQASSREDASAEGDEDDSG 420
Query: 419 IVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYG 478
IVLVACKDE SCMQLED I++ +KVMREEWEKYLLSKV+L+ +QT KK K+KEPKG+G
Sbjct: 421 IVLVACKDERSCMQLEDFIKSDPQKVMREEWEKYLLSKVELQGLQT-RKKNKAKEPKGFG 479
Query: 479 ILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG--DNPETYYGSKGPGRG 536
IL+G P QN E +S+SK EHDAL+AAAS I + K D DN + + GS G G+G
Sbjct: 480 ILNGEVPSTSGQNTEPTSISKLEHDALMAAASVI-SLAKKDTAVSDNSQPHIGSGGRGKG 538
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
RGKGRN S +K + SNS+ DK E+ GS N+
Sbjct: 539 RGKGRNIKITGKAQVSGHKVNNSNSEQGRNDKSEVFGSENDSQG---------------- 582
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQP-ILDILKPFVIVVYHPDMSF 655
KE+ K +TD ++K +P VHFYALES++ ILD+LKP +++VYHPDM+F
Sbjct: 583 -----KEIDPKHCQETDAPSFSNAKQLPLVHFYALESEKSNILDVLKPSIVIVYHPDMTF 637
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
VR+IE+YK ENPS KLKVYFLFYEDSTEVQKF+A IRRENGAFESLIRQKS MMIP+DQ
Sbjct: 638 VREIEIYKTENPSKKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ 696
>gi|296084726|emb|CBI25868.3| unnamed protein product [Vitis vinifera]
Length = 1195
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/718 (66%), Positives = 564/718 (78%), Gaps = 32/718 (4%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L FH+HII ELL++ NGGLV+LSSGL LPKLI+S+LLLH PSQG+LLLLSSSP+ K I+
Sbjct: 236 LNFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLIL 295
Query: 63 HYL---APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
++L P LPSEITADLPA+HRH+LY+SG +FF+T RILIVDLLT R+PTS +AGL
Sbjct: 296 YHLDANPNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGIAGL 355
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
IILN H+L+E TE FI RII+SLN AY+RAFSDKP AMVSGFAK ERIMK LF+R+LH
Sbjct: 356 IILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLRRLH 415
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDL 239
LWPRFQV+VS+ELER PPVVVD+RVPM+ +M GIQKAI+EV+DACLKEMRKTNKVDV+DL
Sbjct: 416 LWPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEMRKTNKVDVDDL 475
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVENGLFKSFDEI+RRQLDPIWH LGKKTKQLVSDLKTLRKLLDYLVRYDAV+YLKYLD+
Sbjct: 476 TVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKYLDS 535
Query: 300 LRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNE 359
LR SE+ RSVWIFAESSYKIF+YAKKRVY F RSDG +L GQ+KSVT KKRKL N
Sbjct: 536 LRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNNNKNEA 595
Query: 360 DEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGI 419
+ D T+ VVLEEVLEE+PKWKVLREVL+EIEEER +QASSRE+ +G+E+D GI
Sbjct: 596 NGDSVLVGTNGGVVLEEVLEESPKWKVLREVLKEIEEEREQQASSREDASAEGDEDDSGI 655
Query: 420 VLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGI 479
VLVACKDE SCMQLED I++ +KVMREEWEKYLLSKV+L+ +QT KK K+KEPKG+GI
Sbjct: 656 VLVACKDERSCMQLEDFIKSDPQKVMREEWEKYLLSKVELQGLQT-RKKNKAKEPKGFGI 714
Query: 480 LDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG--DNPETYYGSKGPGRGR 537
L+G P QN E +S+SK EHDAL+AAAS I + K D DN + + GS G G+GR
Sbjct: 715 LNGEVPSTSGQNTEPTSISKLEHDALMAAASVI-SLAKKDTAVSDNSQPHIGSGGRGKGR 773
Query: 538 GKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLET 597
GKGRN S +K + SNS+ DK E+ GS N+ EI
Sbjct: 774 GKGRNIKITGKAQVSGHKVNNSNSEQGRNDKSEVFGSENDSQGKEID------------- 820
Query: 598 AFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQP-ILDILKPFVIVVYHPDMSFV 656
+KTD ++K +P VHFYALES++ ILD+LKP +++VYHPDM+FV
Sbjct: 821 -----------PVKTDAPSFSNAKQLPLVHFYALESEKSNILDVLKPSIVIVYHPDMTFV 869
Query: 657 RQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
R+IE+YK ENPS KLKVYFLFYEDSTEVQKF+A IRRENGAFESLIRQKS MMIP+DQ
Sbjct: 870 REIEIYKTENPSKKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ 927
>gi|297801452|ref|XP_002868610.1| hypothetical protein ARALYDRAFT_493859 [Arabidopsis lyrata subsp.
lyrata]
gi|297314446|gb|EFH44869.1| hypothetical protein ARALYDRAFT_493859 [Arabidopsis lyrata subsp.
lyrata]
Length = 956
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/726 (63%), Positives = 549/726 (75%), Gaps = 50/726 (6%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSS--SPNLK 58
M L+FHQ II++LL++ NGGLVILSSGLSL KLIAS+L+LHSPSQGTLLLL S + +LK
Sbjct: 1 MALKFHQQIISDLLEDSNGGLVILSSGLSLAKLIASLLILHSPSQGTLLLLLSPAAQSLK 60
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S+IIH ++ P+EITADLPAN R++LY+SG FF+TPRILIVDLLTQR+P S+LAG
Sbjct: 61 SRIIHCISSLDSPTPTEITADLPANQRYSLYTSGSPFFITPRILIVDLLTQRIPVSSLAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ ILN H+L+E STE FI RI+KSLN AYIRAFSD+P AMVSGFAKTER M++LF+R+L
Sbjct: 121 IFILNAHSLSETSTEAFIVRIVKSLNGSAYIRAFSDRPQAMVSGFAKTERTMRALFLRRL 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQ++VS+ELEREPP VVD+RV MS YM GIQKAI+EVMDACLKEM+KTNKVDV+D
Sbjct: 181 HLWPRFQLDVSQELEREPPEVVDIRVSMSNYMVGIQKAIIEVMDACLKEMKKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE+GLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLVRYDAV++LK+LD
Sbjct: 241 LTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVSFLKFLD 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
TLRVSES+RSVW+FAESSYKIFD+AKKRVYR ++ V +SK + K K+
Sbjct: 301 TLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDV----KSKELVKNKSGKKRKSKG 356
Query: 359 EDED----GGTSST--STKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG 412
E++ GG ++T +T VV+EEVLEEAPKWKVLRE+LEE +EER KQA S E D
Sbjct: 357 ENDSVEAVGGETATNVATGVVVEEVLEEAPKWKVLREILEETQEERKKQAFSEE----DN 412
Query: 413 EENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
+N+ GIVLVACKDE SCMQLEDCI N +KVMREEWE YLLSK +LRS+QT KKK+
Sbjct: 413 SDNN-GIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKTELRSMQTPQKKKQKT 471
Query: 473 EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD----GDNPETYY 528
KG+GILDGV PV QN+E SSV +QEH+AL+AAAS I GK+ D +NPE +
Sbjct: 472 P-KGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIHKLGKTTDMALGNNNPEPHV 530
Query: 529 GSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVV 588
+G+ K + S + +S +K KPEI GP +E +
Sbjct: 531 EKASCTKGKAKKDS--------TSLRRSIRSCNKKKENSKPEILA----GPENEEKASEA 578
Query: 589 GYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVV 648
SG + + S +K +P VHFYALESDQPILDILKP VI+V
Sbjct: 579 STSGPR----------------EANVVHSSSAKKLPHVHFYALESDQPILDILKPSVIIV 622
Query: 649 YHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
YHPDM FVR+IEVYKAENP KLKVYFLFY++STEVQKF+A IRREN AFESLIRQKS M
Sbjct: 623 YHPDMGFVREIEVYKAENPLRKLKVYFLFYDESTEVQKFEASIRRENEAFESLIRQKSSM 682
Query: 709 MIPIDQ 714
MIP+DQ
Sbjct: 683 MIPVDQ 688
>gi|79329474|ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
gi|332007265|gb|AED94648.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
Length = 689
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/724 (63%), Positives = 557/724 (76%), Gaps = 44/724 (6%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSS--SPNLK 58
M L++HQ II++LL++ NGGL+ILSSGLSL KLIAS+L+LHSPSQGTLLLL S + +LK
Sbjct: 1 MALKYHQQIISDLLEDSNGGLLILSSGLSLAKLIASLLILHSPSQGTLLLLLSPAAQSLK 60
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S+IIHY++ P+EITADLPAN R++LY+SG FF+TPRILIVDLLTQR+P S+LAG
Sbjct: 61 SRIIHYISSLDSPTPTEITADLPANQRYSLYTSGSPFFITPRILIVDLLTQRIPVSSLAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ ILN H+++E STE FI RI+KSLN AYIRAFSD+P AMVSGFAKTER M++LF+RK+
Sbjct: 121 IFILNAHSISETSTEAFIIRIVKSLNSSAYIRAFSDRPQAMVSGFAKTERTMRALFLRKI 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQ++VS+ELEREPP VVD+RV MS YM GIQKAI+EVMDACLKEM+KTNKVDV+D
Sbjct: 181 HLWPRFQLDVSQELEREPPEVVDIRVSMSNYMVGIQKAIIEVMDACLKEMKKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE+GLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLVRYDAV++LK+LD
Sbjct: 241 LTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVSFLKFLD 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
TLRVSES+RSVW+FAESSYKIFD+AKKRVYR ++ V+ K+ +GKKR K ++
Sbjct: 301 TLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNSKGETDS 360
Query: 359 EDEDGGTSST--STKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ GG ++T +T VV+EEVLEEAPKWKVLRE+LEE +EERLKQA S E+ ++
Sbjct: 361 VEAVGGETATNVATGVVVEEVLEEAPKWKVLREILEETQEERLKQAFSEED-----NSDN 415
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
+GIVLVACKDE SCMQLEDCI N +KVMREEWE YLLSK++LRS+QT KKK+ KG
Sbjct: 416 NGIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKIELRSMQTPQKKKQKTP-KG 474
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD----GDNPETYYGSKG 532
+GILDGV PV QN+E SSV +QEH+AL+AAAS IR GK+ D +NPE +
Sbjct: 475 FGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTTDMASGNNNPEPHVDKAS 534
Query: 533 PGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEI-SGSGNEGPADEIHSGVVGYS 591
+G+ K P S + +S +K KPEI G NE A+E + +
Sbjct: 535 CTKGKAKKD--------PTSLRRSLRSCNKKTTNSKPEILPGPENEEKANEASTSAPQEA 586
Query: 592 GGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + +K +PPVHFYALESDQPILDILKP VI+VYHP
Sbjct: 587 NAVRPSG---------------------AKKLPPVHFYALESDQPILDILKPSVIIVYHP 625
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
DM FVR++EVYKAENP KLKVYF+FY++STEVQKF+A IRREN AFESLIRQKS M+IP
Sbjct: 626 DMGFVRELEVYKAENPLRKLKVYFIFYDESTEVQKFEASIRRENEAFESLIRQKSSMIIP 685
Query: 712 IDQV 715
+DQV
Sbjct: 686 VDQV 689
>gi|15237571|ref|NP_198931.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
gi|55976770|sp|Q9LKI5.2|XPF_ARATH RecName: Full=DNA repair endonuclease UVH1; AltName: Full=DNA
excision repair protein XP-F homolog; AltName:
Full=Ultraviolet hypersensitive 1; Short=AtRAD1
gi|6013183|gb|AAF01274.1|AF160500_1 repair endonuclease [Arabidopsis thaliana]
gi|11995299|gb|AAG42948.1|AF089003_1 single stranded DNA endonuclease RAD1 [Arabidopsis thaliana]
gi|9759161|dbj|BAB09717.1| repair endonuclease [Arabidopsis thaliana]
gi|22655254|gb|AAM98217.1| repair endonuclease [Arabidopsis thaliana]
gi|87128657|gb|ABD23028.1| ultraviolet hypersensitive 1 [Arabidopsis thaliana]
gi|332007264|gb|AED94647.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
Length = 956
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/723 (63%), Positives = 556/723 (76%), Gaps = 44/723 (6%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSS--SPNLK 58
M L++HQ II++LL++ NGGL+ILSSGLSL KLIAS+L+LHSPSQGTLLLL S + +LK
Sbjct: 1 MALKYHQQIISDLLEDSNGGLLILSSGLSLAKLIASLLILHSPSQGTLLLLLSPAAQSLK 60
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S+IIHY++ P+EITADLPAN R++LY+SG FF+TPRILIVDLLTQR+P S+LAG
Sbjct: 61 SRIIHYISSLDSPTPTEITADLPANQRYSLYTSGSPFFITPRILIVDLLTQRIPVSSLAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ ILN H+++E STE FI RI+KSLN AYIRAFSD+P AMVSGFAKTER M++LF+RK+
Sbjct: 121 IFILNAHSISETSTEAFIIRIVKSLNSSAYIRAFSDRPQAMVSGFAKTERTMRALFLRKI 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQ++VS+ELEREPP VVD+RV MS YM GIQKAI+EVMDACLKEM+KTNKVDV+D
Sbjct: 181 HLWPRFQLDVSQELEREPPEVVDIRVSMSNYMVGIQKAIIEVMDACLKEMKKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE+GLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLVRYDAV++LK+LD
Sbjct: 241 LTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVSFLKFLD 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
TLRVSES+RSVW+FAESSYKIFD+AKKRVYR ++ V+ K+ +GKKR K ++
Sbjct: 301 TLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNSKGETDS 360
Query: 359 EDEDGGTSST--STKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ GG ++T +T VV+EEVLEEAPKWKVLRE+LEE +EERLKQA S E D +N+
Sbjct: 361 VEAVGGETATNVATGVVVEEVLEEAPKWKVLREILEETQEERLKQAFSEE----DNSDNN 416
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
GIVLVACKDE SCMQLEDCI N +KVMREEWE YLLSK++LRS+QT KKK+ KG
Sbjct: 417 -GIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKIELRSMQTPQKKKQKTP-KG 474
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD----GDNPETYYGSKG 532
+GILDGV PV QN+E SSV +QEH+AL+AAAS IR GK+ D +NPE +
Sbjct: 475 FGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTTDMASGNNNPEPHVDKAS 534
Query: 533 PGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEI-SGSGNEGPADEIHSGVVGYS 591
+G+ K P S + +S +K KPEI G NE A+E + +
Sbjct: 535 CTKGKAKKD--------PTSLRRSLRSCNKKTTNSKPEILPGPENEEKANEASTSAPQEA 586
Query: 592 GGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + +K +PPVHFYALESDQPILDILKP VI+VYHP
Sbjct: 587 NAVRPSG---------------------AKKLPPVHFYALESDQPILDILKPSVIIVYHP 625
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
DM FVR++EVYKAENP KLKVYF+FY++STEVQKF+A IRREN AFESLIRQKS M+IP
Sbjct: 626 DMGFVRELEVYKAENPLRKLKVYFIFYDESTEVQKFEASIRRENEAFESLIRQKSSMIIP 685
Query: 712 IDQ 714
+DQ
Sbjct: 686 VDQ 688
>gi|6503090|gb|AAF14584.1|AF191494_1 nucleotide excision repair protein XP-F homolog [Arabidopsis
thaliana]
Length = 688
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/723 (63%), Positives = 555/723 (76%), Gaps = 44/723 (6%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSS--SPNLK 58
M L++HQ II++LL++ NGGL+ILSSGLSL KLIAS+L+LHSPSQGTLLLL S + +LK
Sbjct: 1 MALKYHQQIISDLLEDSNGGLLILSSGLSLAKLIASLLILHSPSQGTLLLLLSPAAQSLK 60
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S+IIHY++ P+EITADLPAN R++LY+SG FF+TPRILIVDLLTQR+P S+LAG
Sbjct: 61 SRIIHYISSLDSPTPTEITADLPANQRYSLYTSGSPFFITPRILIVDLLTQRIPVSSLAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ ILN H+++E STE FI RI+KSLN AYIRAFSD+P AMVSGFAKTER M++LF+RK+
Sbjct: 121 IFILNAHSISETSTEAFIIRIVKSLNSSAYIRAFSDRPQAMVSGFAKTERTMRALFLRKI 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQ++VS+ELEREPP VVD+RV MS YM GIQKAI+EVMDACLKEM+KTNKVDV+D
Sbjct: 181 HLWPRFQLDVSQELEREPPEVVDIRVSMSNYMVGIQKAIIEVMDACLKEMKKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE+GLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLVRYDAV++LK+LD
Sbjct: 241 LTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVSFLKFLD 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
TLRVSES+RSVW+FAESSYKIFD+AKKRVYR ++ V+ K+ +GKKR K ++
Sbjct: 301 TLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHVKNKSGKKRNSKGETDS 360
Query: 359 EDEDGGTSST--STKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ GG ++T +T VV+EEVLEEAPKWKVLRE+LEE +EERLKQA S E+ ++
Sbjct: 361 VEAVGGETATNVATGVVVEEVLEEAPKWKVLREILEETQEERLKQAFSEED-----NSDN 415
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
+GIVLVACKDE SCMQLE CI N +KVMREEWE YLLSK++LRS+QT KKK+ KG
Sbjct: 416 NGIVLVACKDERSCMQLEGCITNNPQKVMREEWEMYLLSKIELRSMQTPQKKKQKTP-KG 474
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD----GDNPETYYGSKG 532
+GILDGV PV QN+E SSV +QEH+AL+AAAS IR GK+ D +NPE +
Sbjct: 475 FGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTTDMASGNNNPEPHVDKAS 534
Query: 533 PGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEI-SGSGNEGPADEIHSGVVGYS 591
+G+ K P S + +S +K KPEI G NE A+E + +
Sbjct: 535 CTKGKAKKD--------PTSLRRSLRSCNKKTTNSKPEILPGPENEEKANEASTSAPQEA 586
Query: 592 GGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + +K +PPVHFYALESDQPILDILKP VI+VYHP
Sbjct: 587 NAVRPSG---------------------AKKLPPVHFYALESDQPILDILKPSVIIVYHP 625
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
DM FVR++EVYKAENP KLKVYF+FY++STEVQKF+A IRREN AFESLIRQKS M+IP
Sbjct: 626 DMGFVRELEVYKAENPLRKLKVYFIFYDESTEVQKFEASIRRENEAFESLIRQKSSMIIP 685
Query: 712 IDQ 714
+DQ
Sbjct: 686 VDQ 688
>gi|148008849|gb|ABQ52659.1| ultraviolet hypersensitive 1 [Arabidopsis thaliana]
Length = 935
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/740 (62%), Positives = 557/740 (75%), Gaps = 60/740 (8%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSS--SPNLK 58
M L++HQ II++LL++ NGGL+ILSSGLSL KLIAS+L+LHSPSQGTLLLL S + +LK
Sbjct: 1 MALKYHQQIISDLLEDSNGGLLILSSGLSLAKLIASLLILHSPSQGTLLLLLSPAAQSLK 60
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S+IIHY++ P+EITADLPAN R++LY+SG FF+TPRILIVDLLTQR+P S+LAG
Sbjct: 61 SRIIHYISSLDSPTPTEITADLPANQRYSLYTSGSPFFITPRILIVDLLTQRIPVSSLAG 120
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ ILN H+++E STE FI RI+KSLN AYIRAFSD+P AMVSGFAKTER M++LF+RK+
Sbjct: 121 IFILNAHSISETSTEAFIIRIVKSLNSSAYIRAFSDRPQAMVSGFAKTERTMRALFLRKI 180
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
HLWPRFQ++VS+ELEREPP VVD+RV MS YM GIQKAI+EVMDACLKEM+KTNKVDV+D
Sbjct: 181 HLWPRFQLDVSQELEREPPEVVDIRVSMSNYMVGIQKAIIEVMDACLKEMKKTNKVDVDD 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLV------------ 286
LTVE+GLFKSFDEI+RRQLDPIWH LGK+TKQLVSDLKTLRKLLDYLV
Sbjct: 241 LTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRSVMFLCKTFKL 300
Query: 287 ----RYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
RYDAV++LK+LDTLRVSES+RSVW+FAESSYKIFD+AKKRVYR ++ V+
Sbjct: 301 VFLCRYDAVSFLKFLDTLRVSESYRSVWLFAESSYKIFDFAKKRVYRLVKASDVKSKEHV 360
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSST--STKVVLEEVLEEAPKWKVLREVLEEIEEERLK 400
K+ +GKKR K ++ + GG ++T +T VV+EEVLEEAPKWKVLRE+LEE +EERLK
Sbjct: 361 KNKSGKKRNSKGETDSVEAVGGETATNVATGVVVEEVLEEAPKWKVLREILEETQEERLK 420
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLR 460
QA S E D +N+ GIVLVACKDE SCMQLEDCI N +KVMREEWE YLLSK++LR
Sbjct: 421 QAFSEE----DNSDNN-GIVLVACKDERSCMQLEDCITNNPQKVMREEWEMYLLSKIELR 475
Query: 461 SVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD 520
S+QT KKK+ KG+GILDGV PV QN+E SSV +QEH+AL+AAAS IR GK+ D
Sbjct: 476 SMQTPQKKKQKTP-KGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTTD 534
Query: 521 ----GDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEI-SGSG 575
+NPE + +G+ K P S + +S +K KPEI G
Sbjct: 535 MASGNNNPEPHVDKASCTKGKAKKD--------PTSLRRSLRSCNKKTTNSKPEILPGPE 586
Query: 576 NEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQ 635
NE A+E + + + + +K +PPVHFYALESDQ
Sbjct: 587 NEEKANEASTSAPQEANAVRPSG---------------------AKKLPPVHFYALESDQ 625
Query: 636 PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRREN 695
PILDILKP VI+VYHPDM FVR++EVYKAENP KLKVYF+FY++STEVQKF+A IRREN
Sbjct: 626 PILDILKPSVIIVYHPDMGFVRELEVYKAENPLRKLKVYFIFYDESTEVQKFEASIRREN 685
Query: 696 GAFESLIRQKSFMMIPIDQV 715
AFESLIRQKS M+IP+DQV
Sbjct: 686 EAFESLIRQKSSMIIPVDQV 705
>gi|115450089|ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group]
gi|108705675|gb|ABF93470.1| ERCC4 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113547116|dbj|BAF10559.1| Os03g0100400 [Oryza sativa Japonica Group]
gi|215696969|dbj|BAG90963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768474|dbj|BAH00703.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624006|gb|EEE58138.1| hypothetical protein OsJ_09049 [Oryza sativa Japonica Group]
Length = 995
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/750 (50%), Positives = 497/750 (66%), Gaps = 60/750 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL--LH-SPSQGTLLLLSSSPNLK 58
+L F + ++A+LL++PNGGLV++S GL + L ++VLL H SP G L+LS+ +K
Sbjct: 1 MLPFEEQVVADLLEDPNGGLVVVSCGLPVASLASAVLLQLFHQSPDDGCFLILSAPEPVK 60
Query: 59 SQIIHYLAPNA----PLLP---SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
+QI L N+ PLL ++ DLPA+HR LY+S F++PR L+ D LT RL
Sbjct: 61 AQIRRRLLLNSQSQPPLLQLQVHDVAPDLPAHHRVALYASRAALFLSPRALVADFLTSRL 120
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
S + L++L+ H ++ S++ F+ R+++ + + AFSD+P AMVSGFAK ER MK
Sbjct: 121 LPSRVRALLLLSAHRSSDTSSDAFVARLLRH-HHLLPVYAFSDRPHAMVSGFAKAERAMK 179
Query: 172 SLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKT 231
SL+IR+LHLWPRF + + +LER PP V+DVRVPM++ M GIQ AIL+ MDACLKE+R+T
Sbjct: 180 SLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILDAMDACLKELRRT 239
Query: 232 NKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
NKVDVEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVRYDAV
Sbjct: 240 NKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAV 299
Query: 292 TYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
TYLKYLDTLRVSE RSVWIFA+SS+KIFD +K+RVY+ R+DG ++ +K KKRK
Sbjct: 300 TYLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADNKGTPTKKRK 359
Query: 352 LKKVDN---NEDEDGGTS---------STSTKVVLEEVLEEAPKWKVLREVLEEIEEERL 399
+ + + E E+ G+S + +V+EE+LEEAPKWKVLRE+L+EI EE+
Sbjct: 360 VARASSRKGKETENEGSSDNKDNTQKVNAEMGIVVEEILEEAPKWKVLRELLQEIAEEQA 419
Query: 400 KQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQL 459
K + + N+ GIVLVACKDE SC+QL++CI GS +VMR EWEKYLL K +L
Sbjct: 420 KGDGDNVNPVHEDGINESGIVLVACKDERSCVQLQECISKGSHQVMRAEWEKYLLGKAEL 479
Query: 460 RSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGK-- 517
+ + KK S++ KG+G+LDG P++ ++A S+SK E +ALLAAAS+I K
Sbjct: 480 HGLHRKN-KKTSQQLKGFGVLDGEVPMRSGESAGPVSISKVEANALLAAASEISTVTKEA 538
Query: 518 --SDDGD-----------NPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAA 564
+DD + + + R K RNRN S + A
Sbjct: 539 NLADDSNVSCKKRSFGKGKGKGKFKKTMAKREASKLRNRNTTEHTDLEVEGQSGKTDEQA 598
Query: 565 IEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVP 624
D ++S + A + S AF +S D++P+P
Sbjct: 599 ETDACKLSAEDDSASAPAVDKAANNLS------AF---------------GDSVDTEPLP 637
Query: 625 PVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEV 684
PV FYAL+SDQ +LD+ KP VI+VYHPD++FVR+IEVYKAENPS+KLKVYFLFYEDS EV
Sbjct: 638 PVQFYALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSMKLKVYFLFYEDSAEV 697
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
QKF++ IRREN AFESLIRQKS MMIP+DQ
Sbjct: 698 QKFESSIRRENEAFESLIRQKSLMMIPVDQ 727
>gi|357114520|ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like [Brachypodium
distachyon]
Length = 991
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/740 (50%), Positives = 487/740 (65%), Gaps = 45/740 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQG-----------TLLL 50
+L F + + A+LL++PNGGLV+LSSGL L L+A+ LLLH Q L+
Sbjct: 1 MLPFEEQVAADLLEDPNGGLVVLSSGLPLASLVAT-LLLHLHHQSSSDSSGVGGGGCFLI 59
Query: 51 LSSSPNLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSS----GQIFFVTPRILIVDL 106
LS++ LKSQI L + L ++ DLPANHR LYSS G F++PR+L DL
Sbjct: 60 LSATDTLKSQIRRILVQSQLLQVHDVPPDLPANHRRALYSSEKGDGVALFLSPRVLAADL 119
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
LT L S + L++L+ H ++ S++ FI R+++ +R + AFSD+P AMV+GFAK
Sbjct: 120 LTSHLLPSRVQALLLLSAHRSSDTSSDAFIARLLRQ-HRLLPVYAFSDRPHAMVAGFAKA 178
Query: 167 ERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLK 226
ER MKSL+IR+LHLWPRF V + +LER PP V+D+RVPM+ M GIQ +ILE MDACLK
Sbjct: 179 ERTMKSLYIRRLHLWPRFHVLAAADLERSPPEVIDIRVPMTHPMMGIQASILEAMDACLK 238
Query: 227 EMRKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLV 286
E+R+T KVDVEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYL+
Sbjct: 239 ELRRTYKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLL 298
Query: 287 RYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT 346
RYDAVTYLKYLDTLRVSE RSVWI A+SS+KIF+ AK+RVY+ R DG +++ +K
Sbjct: 299 RYDAVTYLKYLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQVVRPDGTKVSTSNKGTP 358
Query: 347 GKKRKLK-------KVDNNED-----EDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEI 394
KKRK K NED +D + ++LEEVLEEAPKWKVLR +L+EI
Sbjct: 359 TKKRKATHSSSKKGKETENEDSAPNKDDAQNVNAEVSILLEEVLEEAPKWKVLRALLQEI 418
Query: 395 EEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLL 454
EE+ K + EV E N+ GIVL+ACKDE SC+QL+DCI KVMREEWEKYLL
Sbjct: 419 AEEQRKGDGAVPEV----ESNESGIVLLACKDERSCLQLQDCISKSPHKVMREEWEKYLL 474
Query: 455 SKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRN 514
K +L + +K++S++PKG+G+LDG P+ +++A S+ E +ALLAAAS I+
Sbjct: 475 GKAELHGLH-KKRKRQSQQPKGFGVLDGEFPIGSSESAGPVSIGNLETNALLAAASGIKK 533
Query: 515 QGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGS 574
K D + SK Q++N+ +KS ++ ++ +
Sbjct: 534 LTKEADTKDDSIPSCSKRGSVKGKGKGVSKKIMTKRQASNRKNKSTTENDNCQGADVEAT 593
Query: 575 GNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD 634
G EI+ V ++ S + D K +PPV FYAL+SD
Sbjct: 594 GKTDKQSEINVSKVS-----------AEDASDPVSAAGNAEGLIDGKVLPPVQFYALDSD 642
Query: 635 QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRE 694
Q +LD+ KP VI+VYHPD++FVR+IEVYKAENPS KL+VYFLFYE+S+EVQKF++ IRRE
Sbjct: 643 QHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSRKLRVYFLFYEESSEVQKFESSIRRE 702
Query: 695 NGAFESLIRQKSFMMIPIDQ 714
N AFESLIRQKS MMIP+DQ
Sbjct: 703 NEAFESLIRQKSLMMIPVDQ 722
>gi|242037303|ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [Sorghum bicolor]
gi|241919900|gb|EER93044.1| hypothetical protein SORBIDRAFT_01g050650 [Sorghum bicolor]
Length = 1032
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/735 (51%), Positives = 501/735 (68%), Gaps = 33/735 (4%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLL--HSPSQ----GTLLLLSSSP 55
+L F + ++A+L+++PNGGLV+LSSGL L L A++LL +P G LL+LS+
Sbjct: 41 MLAFEEQVVADLVEDPNGGLVVLSSGLPLASLAATLLLYLHQAPGDAAGGGCLLVLSAPD 100
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
+LK++I L + ++ DL A R +LY+SG F++PR L DLLT RL S
Sbjct: 101 SLKARIRRRLQEKMQV--HDVPPDLQAQQRASLYASGAALFLSPRALAADLLTSRLLPSR 158
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ L++L+ H T+ S++ FI R+++ N + AFSD P AMV+GF+K ER MKSL++
Sbjct: 159 VRALLLLSAHRSTDTSSDAFIARLLRQRNL-VPVYAFSDCPHAMVAGFSKAERTMKSLYV 217
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD 235
R+LHLWPRF V + +LER PP VVDVRVPM+ M GIQ A+L MDACLKE+R+TNKVD
Sbjct: 218 RRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELRRTNKVD 277
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
VEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVRYDAVTYLK
Sbjct: 278 VEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLK 337
Query: 296 YLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL--- 352
YLDTLRVSE RSVWI A+SS+KIF+ AK+RVY+ R+DG +++ +K KKRK+
Sbjct: 338 YLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQAVRTDGAKVSMDNKGTPTKKRKVAHN 397
Query: 353 --KKVDNNEDEDGGTSSTSTK-------VVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
KK E+ED +T+ +VLEEVLEEAPKWKVL E+L+EI EE++K S
Sbjct: 398 TTKKGKETENEDSTVGRDNTQKVNTDVGIVLEEVLEEAPKWKVLWELLQEIAEEQMK--S 455
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
V + + ++HGIVLV CKDE +C+QL++CI G +VMREEWEKYL+ K +L +
Sbjct: 456 DAGNVHDEDKSDEHGIVLVTCKDERTCLQLQECILKGPCQVMREEWEKYLIGKAELHGLN 515
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRN-QGKSDDGD 522
+ K+KS++PKG G+LDG + +++ S+SK E +AL AAA ++RN ++D
Sbjct: 516 KKN-KRKSEQPKGVGVLDGEVQMGSSESVGPVSISKLETNALFAAACELRNISNEADVNG 574
Query: 523 NPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPAD- 581
+ +KG RG+ KG+ + A Q++N+ +KS I ++ G D
Sbjct: 575 GSNSSCSTKGLARGKAKGKPKKTTA-KRQASNRKNKSKGGNDIRQATDLDSEVQSGKTDE 633
Query: 582 --EIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILD 639
EI + V + + + +L+ S + KP+PPV F+AL+SDQ +LD
Sbjct: 634 QAEIDASKVSAYDASVSASTSNDKFNHSSALRN----SANGKPLPPVQFHALDSDQHVLD 689
Query: 640 ILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFE 699
+ KP VI+VYHPD++FVR+IEVYKAEN S KLKVYFLFYEDSTEVQKF++ IRREN AFE
Sbjct: 690 VWKPSVIIVYHPDITFVREIEVYKAENSSKKLKVYFLFYEDSTEVQKFESSIRRENEAFE 749
Query: 700 SLIRQKSFMMIPIDQ 714
SLIRQKS MMIP+DQ
Sbjct: 750 SLIRQKSLMMIPVDQ 764
>gi|413926650|gb|AFW66582.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 986
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/731 (51%), Positives = 497/731 (67%), Gaps = 31/731 (4%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLL------HSPSQGTLLLLSSSP 55
+L F Q ++A+L+++PNGGLV+LSSGL L L A++LL ++ G LL+LS++
Sbjct: 1 MLAFEQQVLADLVEDPNGGLVVLSSGLPLASLAATLLLHLHQTPGNAAGGGCLLVLSATD 60
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
LK++I L L ++ DL A R TLY+SG F++PR L DLLT RL S
Sbjct: 61 TLKARIRRRLQDK--LQVHDVPPDLAAQQRATLYASGAALFLSPRALAADLLTSRLLPSR 118
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ L++L+ H T+ S++ FICR+++ N + AFSD P AMV+GF+K ER MKSL++
Sbjct: 119 VQALLLLSAHRSTDTSSDAFICRLLRQRNLLP-VYAFSDCPHAMVAGFSKAERTMKSLYV 177
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD 235
R+LHLWPRF V + +LER PP VVDVRVPM+ M GIQ A+L MDACLKE+R+TNKVD
Sbjct: 178 RRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELRRTNKVD 237
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
VEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVRYDAVTYLK
Sbjct: 238 VEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLK 297
Query: 296 YLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLK-- 353
YLDTLRVSE RSVWI A+SS++IF+ AK+RVY+ R+DGV ++ +K KKRK+
Sbjct: 298 YLDTLRVSEGVRSVWILADSSHRIFELAKRRVYQAVRTDGVNVSIDNKGTPTKKRKVAHN 357
Query: 354 -----KVDNNEDEDGG----TSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASS 404
KV NED G ++T +VLEEVLEEAPKWKVL E+L+EI E+R+K ++
Sbjct: 358 STKKGKVTENEDSTVGPNTQKANTDVGIVLEEVLEEAPKWKVLWELLQEIAEQRMKSSAG 417
Query: 405 REEVLLDGEENDH-GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
+ D ++ND GIVLV+CKDE +C+QL++CI G +VMREEWEKYL+ K +L +
Sbjct: 418 N---VHDEDKNDESGIVLVSCKDERTCLQLQECILKGPCQVMREEWEKYLIGKAELHGL- 473
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
+ K+KS++PKG G+LDG + +++ S+SK E +ALLAAAS++RN D +
Sbjct: 474 -NKDKRKSEQPKGVGVLDGEVQMGSSESVCPVSISKLETNALLAAASELRNISNEADVKS 532
Query: 524 PETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEI 583
SK G +GK + Q +N+ +KS + G G AD +
Sbjct: 533 SSNSSCSKAGG-AKGKPKKTTSKR---QGSNRKNKSKEGNDNSQGTGLDSEGQSGKAD-V 587
Query: 584 HSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKP 643
+ +V + + K + + ++KP+PPV F+AL+SD +LD+ KP
Sbjct: 588 QAEIVASKMSAYDASMSASTSNVKFNHSSAFGNLANAKPLPPVQFHALDSDHQVLDVWKP 647
Query: 644 FVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIR 703
VI+VYHPD++FVR+IEVYKAEN S KLKVYFLFYEDSTEVQK+++ IRREN AFESLIR
Sbjct: 648 SVIIVYHPDITFVREIEVYKAENSSRKLKVYFLFYEDSTEVQKYESSIRRENEAFESLIR 707
Query: 704 QKSFMMIPIDQ 714
QKS MMIP+DQ
Sbjct: 708 QKSLMMIPVDQ 718
>gi|326502968|dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 998
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/755 (50%), Positives = 480/755 (63%), Gaps = 68/755 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGL----------------SLPKLIASVLLLHSPSQ 45
+L F + +A+LL++PNGGLV++S+GL S + S
Sbjct: 1 MLPFEEQAVADLLEDPNGGLVVVSAGLPLASLAAALLLHLHHQSTSSSPSPSSSGGSGGG 60
Query: 46 GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQ--IFFVTPRILI 103
G L+LS+ LK QI L + L ++ +D+PA +R LYSSG+ F+T R+L
Sbjct: 61 GCFLILSAPDALKDQIRRRLVESQLLQVHDVASDVPAANRRALYSSGEGAALFLTARVLA 120
Query: 104 VDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGF 163
DLLT L S + L++L H ++ S + FI R+++ +R + AFSD+P AMV+GF
Sbjct: 121 ADLLTSHLLPSRVRALLLLAAHRSSDVSADAFIARLLRQ-HRLLPVYAFSDRPHAMVAGF 179
Query: 164 AKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDA 223
AK ER MKSL+IR+LHLWPRF V + +LER PP V+DVRVPM+ M GIQ AIL+ MDA
Sbjct: 180 AKAERTMKSLYIRRLHLWPRFHVLAAADLERSPPEVIDVRVPMTNPMAGIQAAILDAMDA 239
Query: 224 CLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLD 283
CLKE+R+T KVDVEDLT++ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLD
Sbjct: 240 CLKELRRTYKVDVEDLTIDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLD 299
Query: 284 YLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
YL RYDAVTYLKYLDTLRVSE RSVW+ AESS+KIF+ AK+RVY+ R DG ++ +K
Sbjct: 300 YLGRYDAVTYLKYLDTLRVSEGVRSVWMLAESSHKIFELAKRRVYQVVRPDGTRVS-IAK 358
Query: 344 SVTGKKRKL-----KKVDNNEDEDGGTSSTSTKVV-------LEEVLEEAPKWKVLREVL 391
KKRK+ KK E+ED ++ + V LEEVLEEAPKWKVLRE+L
Sbjct: 359 GTPTKKRKVTPSRSKKGKETENEDSASNKDDAQKVNAEASFLLEEVLEEAPKWKVLRELL 418
Query: 392 EEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
+EI EE+ K + V+ + E N+ GIVLVACKDE SC+QL++CI +VMREEWEK
Sbjct: 419 QEIAEEQRKG----DAVVHEDENNECGIVLVACKDERSCLQLQECILRSPHQVMREEWEK 474
Query: 452 YLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPV----KIAQNAEASSVSKQEHDALLA 507
YLL K +L + KKK+S++PKG+G+LDG P +NA S+SK E +ALLA
Sbjct: 475 YLLGKAELFGLH-KKKKKRSQQPKGFGVLDGQFPTGSNENENENAGPVSISKLETNALLA 533
Query: 508 AASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIED 567
AAS I N K D P+C + + K + I
Sbjct: 534 AASGISNLTKEADAKEDPV-------------------PSCSKKGSVKGKGKGVQKKITA 574
Query: 568 KPEISGSGNEGPA--DEIHSGVVGYSGGMLE-----TAFVEKEVQWKRSLKTDTAESK-D 619
K + S N+ D V SG +E + V E + D AE D
Sbjct: 575 KRQASKRKNKCTTENDNCQGTDVEASGKTVEQSDINVSKVSAEDAPAPASTPDNAEDLID 634
Query: 620 SKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYE 679
K +PPV FYAL+SDQ +LDI KP VI+VYHPDM+FVR+IEVYKAENPS KLKVYFLFYE
Sbjct: 635 PKMLPPVQFYALDSDQHVLDIWKPSVIIVYHPDMTFVREIEVYKAENPSKKLKVYFLFYE 694
Query: 680 DSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
+S+EVQKF++ IRREN AFESLIRQKS MMIP+DQ
Sbjct: 695 ESSEVQKFESSIRRENEAFESLIRQKSLMMIPVDQ 729
>gi|218191896|gb|EEC74323.1| hypothetical protein OsI_09607 [Oryza sativa Indica Group]
Length = 959
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/747 (48%), Positives = 469/747 (62%), Gaps = 90/747 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL--LH-SPSQGTLLLLSSSPNLK 58
+L F + ++A+LL++PNGGLV++S GL + L ++VLL H SP G L+LS+ +K
Sbjct: 1 MLPFEEQVVADLLEDPNGGLVVVSCGLPVASLASAVLLQLFHQSPDDGCFLILSAPEPVK 60
Query: 59 SQIIHYLAPNA----PLLP---SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
+QI L N+ PLL ++ DLPA+HR LY+S F++PR L+ DLLT RL
Sbjct: 61 AQIRRRLLLNSQSQPPLLQLQVHDVAPDLPAHHRVALYASRAALFLSPRALVADLLTSRL 120
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
S + L++L+ H ++ S++ F+ R+++ + + AFSD+P AMVSGFAK ER MK
Sbjct: 121 LPSRVRALLLLSAHRSSDTSSDAFVARLLRH-HHLLPVYAFSDRPHAMVSGFAKAERAMK 179
Query: 172 SLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKT 231
SL+IR+LHLWPRF + + +LER PP V+DVRVPM++ M GIQ AIL+ MDACLKE+R+T
Sbjct: 180 SLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILDAMDACLKELRRT 239
Query: 232 NKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
NKVDVEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVRYDAV
Sbjct: 240 NKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAV 299
Query: 292 TYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
TYLKYLDTLRVSE RSVWIFA+SS+KIFD +K+RVY+ R+DG ++ +K KKRK
Sbjct: 300 TYLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADNKGTPTKKRK 359
Query: 352 LKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
+V V+ E SR D
Sbjct: 360 KMRV---------------------------------PVITRTYSEGTIAGDSRRTGKGD 386
Query: 412 GEE---------NDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV 462
G+ N+ GIVLVACKDE SC+QL++CI GS +VMR EWEKYLL K +L +
Sbjct: 387 GDNVNPVHEDGINESGIVLVACKDERSCVQLQECISKGSHQVMRAEWEKYLLGKAELHGL 446
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGK----S 518
+KK S++ KG+G+LDG P++ ++A S+SK E +ALLAAAS+I K +
Sbjct: 447 HRKNKKT-SQQLKGFGVLDGEVPMRSGESAGPVSISKVEANALLAAASEISTVTKEANLA 505
Query: 519 DDGD-----------NPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIED 567
DD + + + R K RNRN S + A D
Sbjct: 506 DDSNVSCKKRSFGKGKGKGKFKKTMAKREASKLRNRNTTEHTDLEVEGQSGKTDEQAETD 565
Query: 568 KPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVH 627
++S + A + S AF +S D++P+PPV
Sbjct: 566 ACKLSAEDDSASAPAVDKAANNLS------AF---------------GDSVDTEPLPPVQ 604
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
FYAL+SDQ +LD+ KP VI+VYHPD++FVR+IEVYKAENPS+KLKVYFLFYEDS EVQKF
Sbjct: 605 FYALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSMKLKVYFLFYEDSAEVQKF 664
Query: 688 KAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ IRREN AFESLIRQKS MMIP+DQ
Sbjct: 665 ESSIRRENEAFESLIRQKSLMMIPVDQ 691
>gi|413926648|gb|AFW66580.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 1445
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/721 (49%), Positives = 483/721 (66%), Gaps = 37/721 (5%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLL------HSPSQGTLLLLSSSP 55
+L F Q ++A+L+++PNGGLV+LSSGL L L A++LL ++ G LL+LS++
Sbjct: 1 MLAFEQQVLADLVEDPNGGLVVLSSGLPLASLAATLLLHLHQTPGNAAGGGCLLVLSATD 60
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
LK++I L L ++ DL A R TLY+SG F++PR L DLLT RL S
Sbjct: 61 TLKARIRRRLQDK--LQVHDVPPDLAAQQRATLYASGAALFLSPRALAADLLTSRLLPSR 118
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ L++L+ H T+ S++ FICR+++ N + AFSD P AMV+GF+K ER MKSL++
Sbjct: 119 VQALLLLSAHRSTDTSSDAFICRLLRQRNLLP-VYAFSDCPHAMVAGFSKAERTMKSLYV 177
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD 235
R+LHLWPRF V + +LER PP VVDVRVPM+ M GIQ A+L MDACLKE+R+TNKVD
Sbjct: 178 RRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELRRTNKVD 237
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
VEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVRYDAVTYLK
Sbjct: 238 VEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLK 297
Query: 296 YLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
YLDTLRVSE RSVWI A+SS++IF+ AK+RVY+ R+DGV ++ +K KKR KV
Sbjct: 298 YLDTLRVSEGVRSVWILADSSHRIFELAKRRVYQAVRTDGVNVSIDNKGTPTKKR---KV 354
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKV-LREVLEEIEEERLKQASSREEVLLDGEE 414
+N + G + + + W + L+E+L+EI E+R+K ++ + D ++
Sbjct: 355 AHNSTKKGKVTGSCS-------------WPLHLQELLQEIAEQRMKSSAGN---VHDEDK 398
Query: 415 NDH-GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKE 473
ND GIVLV+CKDE +C+QL++CI G +VMREEWEKYL+ K +L + + K+KS++
Sbjct: 399 NDESGIVLVSCKDERTCLQLQECILKGPCQVMREEWEKYLIGKAELHGL--NKDKRKSEQ 456
Query: 474 PKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGP 533
PKG G+LDG + +++ S+SK E +ALLAAAS++RN D + SK
Sbjct: 457 PKGVGVLDGEVQMGSSESVCPVSISKLETNALLAAASELRNISNEADVKSSSNSSCSKAG 516
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G +GK + Q +N+ +KS + G G AD + + +V
Sbjct: 517 G-AKGKPKKTTSKR---QGSNRKNKSKEGNDNSQGTGLDSEGQSGKAD-VQAEIVASKMS 571
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDM 653
+ + K + + ++KP+PPV F+AL+SD +LD+ KP VI+VYHPD+
Sbjct: 572 AYDASMSASTSNVKFNHSSAFGNLANAKPLPPVQFHALDSDHQVLDVWKPSVIIVYHPDI 631
Query: 654 SFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
+FVR+IEVYKAEN S KLKVYFLFYEDSTEVQK+++ IRREN AFESLIRQKS MMIP+D
Sbjct: 632 TFVREIEVYKAENSSRKLKVYFLFYEDSTEVQKYESSIRRENEAFESLIRQKSLMMIPVD 691
Query: 714 Q 714
Q
Sbjct: 692 Q 692
>gi|413926649|gb|AFW66581.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 1851
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/721 (49%), Positives = 483/721 (66%), Gaps = 37/721 (5%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLL------HSPSQGTLLLLSSSP 55
+L F Q ++A+L+++PNGGLV+LSSGL L L A++LL ++ G LL+LS++
Sbjct: 1 MLAFEQQVLADLVEDPNGGLVVLSSGLPLASLAATLLLHLHQTPGNAAGGGCLLVLSATD 60
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
LK++I L L ++ DL A R TLY+SG F++PR L DLLT RL S
Sbjct: 61 TLKARIRRRLQDK--LQVHDVPPDLAAQQRATLYASGAALFLSPRALAADLLTSRLLPSR 118
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ L++L+ H T+ S++ FICR+++ N + AFSD P AMV+GF+K ER MKSL++
Sbjct: 119 VQALLLLSAHRSTDTSSDAFICRLLRQRNLLP-VYAFSDCPHAMVAGFSKAERTMKSLYV 177
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD 235
R+LHLWPRF V + +LER PP VVDVRVPM+ M GIQ A+L MDACLKE+R+TNKVD
Sbjct: 178 RRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELRRTNKVD 237
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
VEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVRYDAVTYLK
Sbjct: 238 VEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLK 297
Query: 296 YLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
YLDTLRVSE RSVWI A+SS++IF+ AK+RVY+ R+DGV ++ +K KKR KV
Sbjct: 298 YLDTLRVSEGVRSVWILADSSHRIFELAKRRVYQAVRTDGVNVSIDNKGTPTKKR---KV 354
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKV-LREVLEEIEEERLKQASSREEVLLDGEE 414
+N + G + + + W + L+E+L+EI E+R+K ++ + D ++
Sbjct: 355 AHNSTKKGKVTGSCS-------------WPLHLQELLQEIAEQRMKSSAGN---VHDEDK 398
Query: 415 NDH-GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKE 473
ND GIVLV+CKDE +C+QL++CI G +VMREEWEKYL+ K +L + + K+KS++
Sbjct: 399 NDESGIVLVSCKDERTCLQLQECILKGPCQVMREEWEKYLIGKAELHGL--NKDKRKSEQ 456
Query: 474 PKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGP 533
PKG G+LDG + +++ S+SK E +ALLAAAS++RN D + SK
Sbjct: 457 PKGVGVLDGEVQMGSSESVCPVSISKLETNALLAAASELRNISNEADVKSSSNSSCSKAG 516
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G +GK + Q +N+ +KS + G G AD + + +V
Sbjct: 517 G-AKGKPKKTTSKR---QGSNRKNKSKEGNDNSQGTGLDSEGQSGKAD-VQAEIVASKMS 571
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDM 653
+ + K + + ++KP+PPV F+AL+SD +LD+ KP VI+VYHPD+
Sbjct: 572 AYDASMSASTSNVKFNHSSAFGNLANAKPLPPVQFHALDSDHQVLDVWKPSVIIVYHPDI 631
Query: 654 SFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
+FVR+IEVYKAEN S KLKVYFLFYEDSTEVQK+++ IRREN AFESLIRQKS MMIP+D
Sbjct: 632 TFVREIEVYKAENSSRKLKVYFLFYEDSTEVQKYESSIRRENEAFESLIRQKSLMMIPVD 691
Query: 714 Q 714
Q
Sbjct: 692 Q 692
>gi|167999329|ref|XP_001752370.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696765|gb|EDQ83103.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 880
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 303/647 (46%), Positives = 398/647 (61%), Gaps = 53/647 (8%)
Query: 88 LYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA 147
+Y+ G +F +T RILIVD+L +R+P +AG+++ N H LTE E FI R+ + NR
Sbjct: 1 MYNKGGVFSITSRILIVDMLNERVPFKKVAGIMVNNAHRLTETCAEAFIVRLFRQANRTG 60
Query: 148 YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMS 207
+IRAFSD+P AM SGF KTERIMKSLF+R+L+LWPRF ++VS+ LE PP VVD+R+P++
Sbjct: 61 FIRAFSDRPQAMSSGFNKTERIMKSLFVRRLYLWPRFHLSVSDVLEENPPCVVDIRMPLT 120
Query: 208 KYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKK 267
M GIQ AI+EVMDACLKE+RKTNK+DVE+LTVENGL KSFDEI+R QLDPIWH LG K
Sbjct: 121 SAMAGIQTAIVEVMDACLKELRKTNKIDVEELTVENGLLKSFDEIVRSQLDPIWHTLGWK 180
Query: 268 TKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRV 327
TKQLV DLKTLRKL DYL+RYD+VT+LKYLDTLRV+E RSVWIFA ++KIF+ AKKRV
Sbjct: 181 TKQLVGDLKTLRKLADYLLRYDSVTFLKYLDTLRVTEGVRSVWIFANPTHKIFELAKKRV 240
Query: 328 YRFTRSDGVELNGQSKSVTGKKRKLKKVDN---NEDEDGGTSSTSTK---VVLEEVLEEA 381
Y R+DG + Q+K+ G + + N ++ + GG TS K V +E +EE
Sbjct: 241 YSLVRADGTRV-AQAKTGRGGRGGRGRGGNQVRSKRKMGGELKTSKKYLQVQVEVFIEEM 299
Query: 382 PKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG-----IVLVACKDECSCMQLEDC 436
PKW R + E +EE ++ S+ E ++G G +VLVACKDE C+QL++
Sbjct: 300 PKW---RLLREVLEEIEEERQRSKAEKAIEGSSECAGEEVEDVVLVACKDERMCLQLQEV 356
Query: 437 IRNGSEKVMREEWEKYLLSKVQLRSVQTSSKK-KKSKEPKGYGILDG-----VAPVKIAQ 490
+ G EK MREEW KYLLSK L+ ++T +KK PK G++ G V P +
Sbjct: 357 VHYGPEKAMREEWTKYLLSKADLQRMKTRTKKVPTGSNPKWAGVMIGKGGHPVFPTGEVR 416
Query: 491 NAEASS--VSKQEHDALLAAASKIRNQGKSDDGD-NPETYYGSKGPGRGRGKGRNRNGPA 547
N SS + A A + + G +D ET G + N A
Sbjct: 417 NRNESSEELKALAAAASEVAQANVEVIGVGEDAAPRNETRKGLSSAQGSSLENSNTIESA 476
Query: 548 CVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWK 607
+ + A + IS SGNE E + ++G
Sbjct: 477 VKIRLTGSALDPSEVAHVRRNTSISESGNE--VSETETFLLG------------------ 516
Query: 608 RSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENP 667
K K VPPVHFYALES+Q IL++L+P ++VY DM+FVR++EVYKA N
Sbjct: 517 ---------EKQPKSVPPVHFYALESEQRILELLRPLYVIVYDSDMAFVRELEVYKAMNQ 567
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
LKVYFL YEDSTE +F++ I++EN AFE+LIRQK+ M IP+DQ
Sbjct: 568 GRPLKVYFLLYEDSTEASRFESSIKKENVAFENLIRQKATMTIPVDQ 614
>gi|147821195|emb|CAN74882.1| hypothetical protein VITISV_025993 [Vitis vinifera]
Length = 1050
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 274/408 (67%), Positives = 311/408 (76%), Gaps = 42/408 (10%)
Query: 129 ENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV 188
+ TE FI RII+SLN AY+RAFSDKP AMVSGFAK ERIMK LF+R+LHLWPRFQV+V
Sbjct: 312 QTCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLRRLHLWPRFQVHV 371
Query: 189 SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKS 248
S+ELER PPVVVD+RVPM+ +M GIQKAI+EV+DACLKEMRKTNKVDV+DLTVENGLFKS
Sbjct: 372 SQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEMRKTNKVDVDDLTVENGLFKS 431
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
FDEI+RRQLDPIWH LGKKTKQLVSDLKTLRKLLDYLVRYDAV+YLKYLD+LR SE+ RS
Sbjct: 432 FDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKYLDSLRASENIRS 491
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN--------ED 360
VWIFAESSYKIF+YAKKRVY F R LK NN +
Sbjct: 492 VWIFAESSYKIFEYAKKRVYHFVRI-----------------ILKSYFNNFLCVHAYVAN 534
Query: 361 EDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIV 420
D T+ VVLEEVLEE+PKWKVLREVL EIE ER KQASSRE+ +G+E+D GIV
Sbjct: 535 GDSVLVGTNGGVVLEEVLEESPKWKVLREVLXEIEXEREKQASSREDASAEGDEDDSGIV 594
Query: 421 LVACKDECSCMQLEDCIRNGSEK----------------VMREEWEKYLLSKVQLRSVQT 464
LVACKDE SCMQLED I++ +K VMREEWEKYLLSKV+L+ +QT
Sbjct: 595 LVACKDERSCMQLEDFIKSXPQKVLSRFLIFMDKNLFLIVMREEWEKYLLSKVELQGLQT 654
Query: 465 SSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKI 512
KK K+KEPKG+GIL+G P QN E +S+SK EHDAL+AAAS I
Sbjct: 655 -RKKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDALMAAASVI 701
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 679 EDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
+DSTEVQKF+A I RENGAFESLIRQKS MMIP+DQ
Sbjct: 747 KDSTEVQKFEASIXRENGAFESLIRQKSLMMIPVDQ 782
>gi|302771355|ref|XP_002969096.1| hypothetical protein SELMODRAFT_90549 [Selaginella moellendorffii]
gi|300163601|gb|EFJ30212.1| hypothetical protein SELMODRAFT_90549 [Selaginella moellendorffii]
Length = 933
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/518 (46%), Positives = 337/518 (65%), Gaps = 23/518 (4%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L F + I++EL+QE L ++++GL LP ++A+++ LHS S G L LLS S+
Sbjct: 1 MLNFQEEIVSELVQE--NALAVVAAGLGLPSILAALVRLHSSSSGVLFLLSKILPCSSRA 58
Query: 62 IHYLAPNAPLL----PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
++P A + P EI A R +YS G F VT RIL+VD+L +R+P +A
Sbjct: 59 PAIISPQAQDIGAEQPVEINTQFTAAERAEMYSKGGAFLVTSRILVVDMLNERVPFHKVA 118
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
G+I+ N+H +TE E FI R+ +S N+ Y+R SD+ + SGF K ER+MKSL ++K
Sbjct: 119 GIIVNNSHRMTETCAEAFIVRLYRSKNKAGYVRGISDQARGLTSGFMKMERVMKSLLVKK 178
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE 237
L+LWPRF ++++ LE PP VVD+RVP++ M IQ AILEVMDACLKE+RKTNKVDVE
Sbjct: 179 LNLWPRFHLSIATALEESPPDVVDIRVPLTPSMLAIQNAILEVMDACLKELRKTNKVDVE 238
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DLTVENGLFKSFDEI+R QLDPIWH +G+KTK+LV+DLKTLRKL +YL+RYDAVT+LKYL
Sbjct: 239 DLTVENGLFKSFDEIVRMQLDPIWHTIGRKTKRLVADLKTLRKLAEYLIRYDAVTFLKYL 298
Query: 298 DTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT-----GKKRKL 352
DT+R SE +SVW+FA +++IF+ AK+RVY+ R+DG ++ K + GK +
Sbjct: 299 DTVRASEGVKSVWVFAGPAHRIFELAKRRVYQIVRTDGEQVESLVKQASPAVSKGKAQSK 358
Query: 353 KKVDNNEDEDGGTSSTSTK-VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
K ++E+ + S K V LE V EE PKWKV +E+LEEI++E SR L +
Sbjct: 359 NKRRREQEEEEADAKVSGKGVELEVVAEEMPKWKVYKEILEEIQQE----IQSRPADLPE 414
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKS 471
VLVACKDE + QL+ I G E++MREEW YLL+K +L + KKK
Sbjct: 415 DSWKSEARVLVACKDERTAWQLQRFILKGPEELMREEWNNYLLAKAELHGMTLRDKKKSR 474
Query: 472 KEPK-----GYGILDGVAPVKIAQNAEASSVSKQEHDA 504
+P+ +G+++ A +A AE +++K E +
Sbjct: 475 SKPQAQPQSAHGLVEQTA--LLAACAEVVALNKMEESS 510
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 620 SKPVPPVHFYALESDQ-PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFY 678
S VPPV +YALESDQ ILD P ++VY PDM FVR++EV+KA++P +LKVYFLFY
Sbjct: 560 SSLVPPVQYYALESDQYRILDTTGPSYVIVYDPDMKFVREMEVFKAKHPQRRLKVYFLFY 619
Query: 679 EDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
E+STE +KF+A I+RE AFE+LIRQK+ M+IP+DQV
Sbjct: 620 EESTEGKKFEASIQRETTAFETLIRQKASMIIPVDQV 656
>gi|255580807|ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
communis]
gi|223529184|gb|EEF31160.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
communis]
Length = 887
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/406 (59%), Positives = 291/406 (71%), Gaps = 34/406 (8%)
Query: 314 ESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTK-- 371
ESS+KIFDYAKKRVYR RS +++G SKS TGKKRKLK+ +N+D GTSST+
Sbjct: 243 ESSFKIFDYAKKRVYRLARSSDAKVDGTSKSTTGKKRKLKRDRDNDDVAEGTSSTNLNGV 302
Query: 372 VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCM 431
VVLEEVLE APKWKVLR++L+EIEEE KQA RE+ L + EE D GIVLVACKDE SCM
Sbjct: 303 VVLEEVLEAAPKWKVLRDILQEIEEEIHKQALLREDNLAESEEIDDGIVLVACKDERSCM 362
Query: 432 QLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPK-GYGILDGVAPVKIAQ 490
QLED I NG++KV+REEWEKYLLSKV+L S+ T KKK + G+GILDGV PV AQ
Sbjct: 363 QLEDFIMNGAQKVLREEWEKYLLSKVELHSMPTPQKKKPKPKESKGFGILDGVVPVIAAQ 422
Query: 491 NAEASSVSKQEHDALLAAASKIRNQGKSDD--GDNPETYYGSKGPGRGRGKGRNRNGPAC 548
NAEASS++KQE+DALLAA S+IRNQ + D D P+ + GKGRN+ G A
Sbjct: 423 NAEASSINKQENDALLAAVSEIRNQHRKDYIVEDEPQPLVDGGKSCKTWGKGRNKRGRAN 482
Query: 549 VPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKR 608
PQ++ +D+ NS+ I GYS + +E+ V +
Sbjct: 483 -PQNSGEDN-VNSELKIS----------------------GYS----RASSIEQGVLRRH 514
Query: 609 SLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPS 668
+ + D +S ++K +P VHFYA ESDQPILDILKP VI+VYHPDM+FVR+IEVYKAENPS
Sbjct: 515 TQQLDPLQS-NAKQIPSVHFYAQESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENPS 573
Query: 669 IKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
+L+VYFLFYEDSTEVQKF+AGIRRENGAFESLIRQKS MMIP+DQ
Sbjct: 574 KRLRVYFLFYEDSTEVQKFEAGIRRENGAFESLIRQKSMMMIPVDQ 619
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/257 (68%), Positives = 217/257 (84%), Gaps = 5/257 (1%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSS--PNLKS 59
+++FH+HII +LL++P+GGLVILSSGL LPKLI+S+LLLH SQGTLL+LSSS P LK+
Sbjct: 1 MVQFHEHIITDLLEDPSGGLVILSSGLCLPKLISSLLLLHHSSQGTLLILSSSSSPYLKT 60
Query: 60 QIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
I+H+ + + +EITADLPA+HR +LY+SG+I F+TPRILIVDLLT ++P S L+G+
Sbjct: 61 LILHHHNNHHNI--TEITADLPAHHRLSLYTSGEICFITPRILIVDLLTNKIPVSALSGI 118
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
IILN H+L+E STE FI RI+K+L++ Y+RAF+DKP AMV GF+KTERIMK+L+I+KLH
Sbjct: 119 IILNAHSLSETSTEAFIVRILKTLSQSIYVRAFTDKPHAMVMGFSKTERIMKALYIKKLH 178
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDL 239
LWPRFQV VSEELER PP VVDVRV MSKYM GIQKAI+EVMDACLKEMRKTNKVDVEDL
Sbjct: 179 LWPRFQVYVSEELERAPPEVVDVRVGMSKYMIGIQKAIIEVMDACLKEMRKTNKVDVEDL 238
Query: 240 TVEN-GLFKSFDEILRR 255
++EN FK FD +R
Sbjct: 239 SIENESSFKIFDYAKKR 255
>gi|302784390|ref|XP_002973967.1| hypothetical protein SELMODRAFT_232247 [Selaginella moellendorffii]
gi|300158299|gb|EFJ24922.1| hypothetical protein SELMODRAFT_232247 [Selaginella moellendorffii]
Length = 801
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/399 (50%), Positives = 266/399 (66%), Gaps = 26/399 (6%)
Query: 78 ADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFIC 137
+ A R +YS G F VT RIL+VD+L +R+P +AG+I+ N+H +TE E FI
Sbjct: 13 GEFTAAERAEMYSKGGAFLVTSRILVVDMLNERVPFHKVAGIIVNNSHRMTETCAEAFIV 72
Query: 138 RIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPP 197
R+ +S N+ Y+R SD+ + SGF K ER+MKSL ++KL+LWPRF ++++ LE PP
Sbjct: 73 RLYRSKNKAGYVRGISDQARGLTSGFMKMERVMKSLLVKKLNLWPRFHLSIATALEESPP 132
Query: 198 VVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQL 257
VVD+RVP++ M IQ AILEVMDACLKE+RKTNKVDVEDLTVENGLFKSFDEI+R QL
Sbjct: 133 DVVDIRVPLTPSMLAIQNAILEVMDACLKELRKTNKVDVEDLTVENGLFKSFDEIVRMQL 192
Query: 258 DPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSY 317
DPIWH +G+KTK+LV+DLKTLRKL +YL+RYDAVT+LKYLDT+R SE +SVW+FA ++
Sbjct: 193 DPIWHTIGRKTKRLVADLKTLRKLAEYLIRYDAVTFLKYLDTVRASEGVKSVWVFAGPAH 252
Query: 318 KIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEV 377
+IF+ AK+RVY+ R+DG ++ K ++ V LE V
Sbjct: 253 RIFELAKRRVYQIVRTDGEQVESVVK----------------------QASRAGVELEVV 290
Query: 378 LEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI 437
EE PKWKV +E+LEEI++E SR L + VLVACKDE + QL+ I
Sbjct: 291 AEEMPKWKVYKEILEEIQQE----IQSRPADLPEDSWKSEARVLVACKDERTAWQLQRFI 346
Query: 438 RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G E++MREEW YLL+K +L + KKK +P+
Sbjct: 347 LKGPEELMREEWNNYLLAKAELHGMTLRDKKKSRSKPQA 385
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 620 SKPVPPVHFYALESDQ-PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFY 678
S VPPV +YALESDQ ILD P ++VY PDM FVR++EV+KA++P +LKVYFLFY
Sbjct: 428 SSLVPPVQYYALESDQYRILDTTGPSYVIVYDPDMKFVREMEVFKAKHPQRRLKVYFLFY 487
Query: 679 EDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
E+STE +KF+A I+RE AFE+LIRQK+ M+IP+DQV
Sbjct: 488 EESTEGKKFEASIQRETTAFETLIRQKASMIIPVDQV 524
>gi|226374630|gb|ACO52467.1| DNA repair endonuclease XPF [Liza aurata]
Length = 897
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 239/722 (33%), Positives = 381/722 (52%), Gaps = 116/722 (16%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLL--SSSPNLKS 59
+LEF + L GL++++ G+ + +++ + ++S QG+L+LL +++P +
Sbjct: 5 LLEFETEMFLSLFG--CDGLLVVAEGMGIDRILLQFMRVYS-EQGSLVLLLNTTTPEQEY 61
Query: 60 QIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
LP +T+D+ + R+ +Y+ G + FVT RIL+VD LT R+P ++G+
Sbjct: 62 FTEQLRVEGVTHLPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISGI 121
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++ H + E+ E FI R+ + N+ +I+AF+DK TA SGF + ER+M++LF++KL+
Sbjct: 122 LVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKLY 181
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
LWPRFQV+V+ L+R P VV++ V ++ M IQ +IL++M ACLKE+++ N ++ ED
Sbjct: 182 LWPRFQVSVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPTLEAED 241
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L++EN L SF++ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L+
Sbjct: 242 LSLENTLGNSFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLLE 301
Query: 299 TLRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
+LR S+ SF S W+F +SS +F A+ RV+R S K+KLK
Sbjct: 302 SLRSSQKSFGSNSGWLFLDSSTSMFMNARSRVHRIPES---------------KKKLKV- 345
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
D + S++++V E VLE++PKW+ L EVLEEIE E ++
Sbjct: 346 --GADPEKQKMSSASEVKRELVLEKSPKWEALTEVLEEIEREN------------KSSQH 391
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPK 475
+ G VL+ D+ +C QL+ IR+GS+ +LL+++ R++
Sbjct: 392 EPGRVLICASDDRTCAQLQQYIRHGSD---------WLLNRLYARTI------------- 429
Query: 476 GYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGR 535
+ DA AAA ++ + K D + KGP
Sbjct: 430 ------------------------GKRDASAAAAFELDSHQKGKD-------WVKKGP-- 456
Query: 536 GRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSG--G 593
KG+ P K +K S +P ++ + G + + V+G SG
Sbjct: 457 ---KGKE-------PAQKKKTTKGKS------RPSLTLTQMMGKEETGEAAVMGGSGDED 500
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVY 649
L +E + K L +D +P+ +H +D +L ++P +V+Y
Sbjct: 501 ELVEEGDGEEEELKLDLSSDAYYGVLKEPLTVIHPLKGCTDPHSLTRVLHEVEPSFVVLY 560
Query: 650 HPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMM 709
++SFVRQ+E+YKA P L+VYFL Y STE QK+ + +E AFE LIR+K+ M+
Sbjct: 561 DAELSFVRQLEIYKANRPGKALRVYFLIYGGSTEEQKYLTALSKEKKAFEHLIREKATMV 620
Query: 710 IP 711
IP
Sbjct: 621 IP 622
>gi|348502403|ref|XP_003438757.1| PREDICTED: DNA repair endonuclease XPF-like [Oreochromis niloticus]
Length = 899
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 234/721 (32%), Positives = 374/721 (51%), Gaps = 112/721 (15%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS-PSQGTLLLLSSSPNLKSQ 60
+LEF + L + GL++ + GL + +++ L ++S P LLL +++P +
Sbjct: 5 LLEFETEMFLSLFG--SDGLLVTAEGLGIDRILLQFLRVYSEPGSLVLLLNTTTPEQEYF 62
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
LP +T+D+ + R+ +Y+ G + FVT RIL+VD LT R+P + G++
Sbjct: 63 TEQLRVEGVTHLPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLITGIL 122
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+DK TA SGF + ER+M++LF++KL+L
Sbjct: 123 VYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKLYL 182
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V+ L+R P VV++ V ++ M IQ +IL++M ACLKE+++ N ++ EDL
Sbjct: 183 WPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMTACLKELKRYNPTLEAEDL 242
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L SF++ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 243 SLENTLGNSFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCITFLNLLES 302
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
L S+ S W+F +SS +F A+ RVYR S K+KLK
Sbjct: 303 LHSSQKIFGSNSGWLFLDSSTSMFVNARSRVYRIPES---------------KKKLKVGA 347
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E + S++++V E VLE +PKW+ L EVLEEIE E +++
Sbjct: 348 EAEKQK---PSSASEVKRELVLENSPKWEALTEVLEEIEREN------------KSSQHE 392
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL+ I++GS+ +LL+++ R
Sbjct: 393 PGRVLICASDDRTCAQLQQYIKHGSD---------WLLNRLYHR---------------- 427
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
++ K++ AL A + +G KGP +
Sbjct: 428 -------------------TIGKRDSAALGALELDLEQKG--------------KGPVKK 454
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
KG+ Q A K + +K + +P ++ + G + + V+G SG E
Sbjct: 455 GTKGK---------QPAQKKNAKTTKG--KSRPSLTLTQMVGKEETGEAAVMGSSGDEDE 503
Query: 597 TAFVE--KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYH 650
+ +E Q K L +D +P+ +H +D +L ++P +V+Y
Sbjct: 504 LTDEDGGEEEQLKLDLSSDAYYGVLKEPLTVIHPLKGCTDPHSLTRVLHEVEPSFVVLYD 563
Query: 651 PDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
++SFVRQ+E+YKA P +L+VYFL Y STE QK+ + +E AFE LIR+K+ M+I
Sbjct: 564 AELSFVRQLEIYKANRPGKQLRVYFLIYGGSTEEQKYLTALSKEKKAFEHLIREKATMVI 623
Query: 711 P 711
P
Sbjct: 624 P 624
>gi|363739513|ref|XP_414734.3| PREDICTED: DNA repair endonuclease XPF [Gallus gallus]
Length = 903
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 228/719 (31%), Positives = 370/719 (51%), Gaps = 101/719 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE I +L + GLV+ + GL + +L+ L L+ +L+L++SP +
Sbjct: 4 LLEHESQIFLDLFHQ--DGLVVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEYF 61
Query: 62 IHYLAPNAPL-LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + + LP +T ++P+N R+ Y+ G + F T RIL+VD LT R+P + + G++
Sbjct: 62 IDQLRSDGVVHLPRRVTNEIPSNTRYEFYTQGGVLFATSRILVVDFLTDRIPANLITGVL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E+FI R+ + N+E +I+AF+D A +GF + ER+M++LF+RKL+L
Sbjct: 122 VYKAHRIIESCQESFILRLYRQKNKEGFIKAFTDNAVAFNTGFCQVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF + V+ LE+ P VV++ V M+ M IQ +IL++++ACL+E+++ N ++VEDL
Sbjct: 182 WPRFHIAVNSFLEKHKPEVVEIHVSMTPSMLAIQTSILDILNACLRELKRYNPALEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K+FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENALGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
L+ SE +F S W+F +SS +F A+ RVY R+ +LN + K + R +KK
Sbjct: 302 LKASEKAFGENSGWLFLDSSTSMFVNARARVY---RTADEKLNQKGK--VSENRDVKK-- 354
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
++ E VLE PKW+ LREVL EIE E ++ L G
Sbjct: 355 ------------ENELKRELVLESNPKWEALREVLNEIENE------NKNSEDLGGP--- 393
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL + I +G+E + + K L K +K+ E
Sbjct: 394 -GQVLICASDDRACAQLREYITDGAEAFLMRLYNKTL------------GKDEKAGE--- 437
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
+ ++++G + P+ G
Sbjct: 438 ---------------------------VWIKDRKVVKSKGNARPDTGPQAKKAKLSTGSK 470
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
+ K + ++ V ++ + +ED E++GS G +E
Sbjct: 471 QNKHKKQHDQTVVQMIGKTKEENREELDVEDNKELNGSQE----------------GSIE 514
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVH-FYALESDQPILDIL---KPFVIVVYHPD 652
F E + L +D+ P+ +H Y + +L +P +V+Y +
Sbjct: 515 ETFPE---DFPVKLPSDSYYGIFKNPLTIIHPLYGCSDPYALTRVLHEVEPRYVVLYDAE 571
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+YKA P L+VYFL Y STE Q++ +R+E AFE LIR+++ M++P
Sbjct: 572 LTFVRQLEIYKAGRPGKPLRVYFLIYGSSTEEQRYLTALRKEKEAFEKLIRERASMVVP 630
>gi|47226113|emb|CAG04487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 895
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 234/722 (32%), Positives = 366/722 (50%), Gaps = 116/722 (16%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS-PSQGTLLLLSSSPNLKSQ 60
+LEF + LL + GLV+ + G+ + +++ + ++S P LLL +++P +
Sbjct: 5 LLEFETEMFLSLLG--SDGLVVAAEGMGIDRVLLQFMRVYSEPGSLVLLLNTTTPEQEYL 62
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
LP +T+D+ R+ +Y+ G + FVT RIL+VD LT R+P + G++
Sbjct: 63 TEQLRMEGVAHLPRTVTSDIQNTERYHVYTQGGVLFVTSRILVVDFLTDRIPAHLITGIL 122
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+DK TA+ SGF + ER+M++LF++KL L
Sbjct: 123 VYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATALSSGFCQVERVMRNLFVKKLLL 182
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V+ L+R P VV++ V ++ M IQ AILE+M ACLKE+++ N ++ ED
Sbjct: 183 WPRFQASVNAALDRHKPEVVELHVSLTPAMRAIQSAILELMSACLKELKRYNPTLEAEDF 242
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + SFD+ +R LDP+WH LG KTK LV DLK LR L YL +YD VT+L L++
Sbjct: 243 SLENTIGNSFDKTIRHYLDPLWHQLGAKTKALVHDLKVLRVLSLYLTQYDCVTFLNLLES 302
Query: 300 LRVSE---SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR S+ S W+F +SS +F A+ RVY S K+KLK
Sbjct: 303 LRSSQKNFGSNSGWLFLDSSTSMFVNARARVYHIPDS---------------KKKLKGGT 347
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ E S+ T+V + VLE++PKW+ L EVL+EIE E ++
Sbjct: 348 DTEK----PKSSVTEVQRKLVLEKSPKWEALTEVLQEIEREN------------KSSQHG 391
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL+ IR+GS+ +LL+++ R++
Sbjct: 392 QGHVLICASDDRTCAQLQQYIRHGSD---------WLLNRLYTRTI-------------- 428
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
+ D+ AAA ++ D D T G K G
Sbjct: 429 -----------------------GKRDSAAAAAFEL----DLDRKDKERTAKGQKRKGTS 461
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
+ KG +I++K S + + E G++G SG +
Sbjct: 462 QKKGTK---------------------SIKNKKRPSLTLTQMMGKEAEEGMMGSSGDDED 500
Query: 597 TAFVEK---EVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVY 649
+ E E + K L +D +P+ +H +D +L ++P +V+Y
Sbjct: 501 ESMEEAGKGEEEPKLDLSSDAYYGVLKEPLTVIHPLKGLTDPHSLTRVLHEVEPSFVVLY 560
Query: 650 HPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMM 709
++SFVRQ+E+YKA P L+VYFL Y STE QK+ + +E AFE LIR+K+ M+
Sbjct: 561 DAELSFVRQLEIYKACRPGKPLRVYFLIYGGSTEEQKYLTSLSKEKKAFEHLIREKATMV 620
Query: 710 IP 711
IP
Sbjct: 621 IP 622
>gi|6063149|gb|AAF03157.1|AF189285_1 DNA repair endonuclease XPF [Mus musculus]
Length = 917
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 363/719 (50%), Gaps = 98/719 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SNGLVVCARGLGTDRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E S W+F ++S +F A+ RVYR V+LN ++K T +K +V
Sbjct: 313 LRATEKVFGQNSGWLFLDASTSMFVNARARVYRVP---DVKLNKKAK--TSEKTSSPEVQ 367
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ E VLE PKW+ L +VL+EIE A ++E L G
Sbjct: 368 ETKK--------------ELVLESNPKWEALTDVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL D + G+E + LR + + +K E
Sbjct: 405 -GRVLICASDDRTCCQLRDYLSAGAETFL-------------LRLYRKTFEKDGKAEEVW 450
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
+ G P + ++ + AA +K R K RG
Sbjct: 451 VNVRKGDGPKRTTKSDKRPK----------AAPNKERASAK-----------------RG 483
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
R + + + KA ED + S EG EI
Sbjct: 484 APLKRKKQELTLTQVLGSAEEPPEDKALEEDLCRQTSSSPEGCGVEI------------- 530
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPD 652
K + ++ +D A +P+ +H SD +L ++P +V+Y +
Sbjct: 531 -----KRESFDLNVSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAE 585
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 586 LTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 644
>gi|20073215|gb|AAH26792.1| Ercc4 protein [Mus musculus]
Length = 906
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 363/719 (50%), Gaps = 98/719 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 4 LLEYERQQVLELLD--SDGLVVCARGLGTDRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 61
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 62 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 122 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 182 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E S W+F ++S +F A+ RVYR V+LN ++K T +K +V
Sbjct: 302 LRATEKVFGQNSGWLFLDASTSMFVNARARVYRVP---DVKLNKKAK--TSEKTSSPEVQ 356
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ E VLE PKW+ L +VL+EIE A ++E L G
Sbjct: 357 ETKK--------------ELVLESNPKWEALTDVLKEIE------AENKESEALGGP--- 393
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL D + G+E + LR + + +K E
Sbjct: 394 -GRVLICASDDRTCCQLRDYLSAGAETFL-------------LRLYRKTFEKDGKAEEVW 439
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
+ G P + ++ + AA +K R K RG
Sbjct: 440 VNVRKGDGPKRTTKSDKRPK----------AAPNKERASAK-----------------RG 472
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
R + + + KA ED + S EG EI
Sbjct: 473 APLKRKKQELTLTQVLGSAEEPPEDKALEEDLCRQTSSSPEGCGVEI------------- 519
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPD 652
K + ++ +D A +P+ +H SD +L ++P +V+Y +
Sbjct: 520 -----KRESFDLNVSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAE 574
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 575 LTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 633
>gi|241666402|ref|NP_056584.2| DNA repair endonuclease XPF [Mus musculus]
gi|229463019|sp|Q9QZD4.3|XPF_MOUSE RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA
excision repair protein ERCC-4
gi|2896801|gb|AAC03240.1| ERCC4_MOUSE [Mus musculus]
gi|148664944|gb|EDK97360.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Mus musculus]
Length = 917
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 363/719 (50%), Gaps = 98/719 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGTDRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E S W+F ++S +F A+ RVYR V+LN ++K T +K +V
Sbjct: 313 LRATEKVFGQNSGWLFLDASTSMFVNARARVYRVP---DVKLNKKAK--TSEKTSSPEVQ 367
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ E VLE PKW+ L +VL+EIE A ++E L G
Sbjct: 368 ETKK--------------ELVLESNPKWEALTDVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL D + G+E + LR + + +K E
Sbjct: 405 -GRVLICASDDRTCCQLRDYLSAGAETFL-------------LRLYRKTFEKDGKAEEVW 450
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
+ G P + ++ + AA +K R K RG
Sbjct: 451 VNVRKGDGPKRTTKSDKRPK----------AAPNKERASAK-----------------RG 483
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
R + + + KA ED + S EG EI
Sbjct: 484 APLKRKKQELTLTQVLGSAEEPPEDKALEEDLCRQTSSSPEGCGVEI------------- 530
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPD 652
K + ++ +D A +P+ +H SD +L ++P +V+Y +
Sbjct: 531 -----KRESFDLNVSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAE 585
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 586 LTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 644
>gi|344292094|ref|XP_003417763.1| PREDICTED: DNA repair endonuclease XPF [Loxodonta africana]
Length = 916
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 369/719 (51%), Gaps = 99/719 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL+ GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLEA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 73 ISQLKLEGVDHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVKKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ A+L++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVAMTPAMRAIQTAVLDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRALLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHVPDA----------KMSKKSQMSEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E +D E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQDTKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL +CI G+ E +LL ++ +S + SK ++
Sbjct: 405 -GQVLICASDDRTCSQLRECITTGA--------EAFLL-RLYRKSFEKDSKAEE------ 448
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
K R + S P +K P
Sbjct: 449 -------------------------------VWMKFRKEDSSKRIMKP-----NKRPKDP 472
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
+ K R N + + + + + A E+ E G EG EI S G+
Sbjct: 473 QNKERASNKERTLKRKKRRLTLTQMMANSEEH-EGEGKVEEGYPREISSSQESGLEGI-- 529
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPD 652
K ++ +L +D A +P+ +H SD +L ++P +V+Y +
Sbjct: 530 -----KHEEFDLNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAE 584
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M+IP
Sbjct: 585 LTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIP 643
>gi|345802291|ref|XP_536967.3| PREDICTED: DNA repair endonuclease XPF [Canis lupus familiaris]
Length = 916
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 233/719 (32%), Positives = 366/719 (50%), Gaps = 99/719 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ +L LH L LS+ P+L
Sbjct: 15 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYPLLRLHCHPACLCLCLSTQPSLLEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+ KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVGKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + + K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDA----------KMNKKGKMSEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
ED++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEDQEAKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL + I G+E + + K + V + + S
Sbjct: 405 -GQVLICASDDRTCSQLREYITIGAEAFLMRLYRKTFEKDSKAEEVWMKLRHEDS----- 458
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
P ++A++ + + + AA+K R K
Sbjct: 459 --------PKRMARSNKRPKDPQNKQ----RAATKERTLKK------------------- 487
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
K R V +S D + + K E P +GS E +EI
Sbjct: 488 --KKRRLTLTQMVGKSEEPDEEQDVK---EGYPRDTGSSPESSLEEI------------- 529
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPD 652
K ++ +L +D A P+ +H SD +L ++P +V+Y +
Sbjct: 530 -----KHEEFDLNLSSDAAYGLLKDPLTILHPLLGCSDPYALTRVLHEVEPRYVVLYDAE 584
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 585 LTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|395860979|ref|XP_003802775.1| PREDICTED: DNA repair endonuclease XPF [Otolemur garnettii]
Length = 916
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 233/723 (32%), Positives = 367/723 (50%), Gaps = 107/723 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N+R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNNRYEVYTQGGVIFATSRILVVDFLTNRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKHGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VED+
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDM 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + + K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHVPDA----------KINIKGKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L +VL EIE A ++E L G
Sbjct: 363 VKEGQETKK---------ELVLESNPKWEALTQVLREIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL D I G+E + + K + + V +K+ S
Sbjct: 405 -GQVLICASDDRTCSQLRDYITLGTEAFLLRLYRKTFEKDSKAKEVWMKFRKEDSSRE-- 461
Query: 477 YGILDGVAPVKIAQNAEASSVS----KQEHDALLAAASKIRNQGKSDDGDNPETYYGSKG 532
I+ K QN E SS K++ L +++ +DGD E Y+
Sbjct: 462 --IMKSKKRPKNPQNKERSSTKGRTLKKKKRRLTLTQMIEKSEELEEDGDVEEGYHR--- 516
Query: 533 PGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSG 592
EIS S EG ++E+
Sbjct: 517 -------------------------------------EISSSP-EGRSEEV--------- 529
Query: 593 GMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVV 648
K + +L +D A +P+ +H SD +L ++P +V+
Sbjct: 530 ---------KHEDFDLNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVL 580
Query: 649 YHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M
Sbjct: 581 YDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASM 640
Query: 709 MIP 711
++P
Sbjct: 641 VVP 643
>gi|443897896|dbj|GAC75235.1| hypothetical protein PANT_14d00101 [Pseudozyma antarctica T-34]
Length = 995
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 233/746 (31%), Positives = 384/746 (51%), Gaps = 76/746 (10%)
Query: 2 VLEFHQHIIAELL----QEPNGG--LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP 55
+L FH I++ L+ P+ G LVI++ GL L +++++VL ++ ++L++++
Sbjct: 13 LLPFHCQIVSSLVPAEDDSPDEGDALVIIARGLGLRRIVSTVLRIYDSPNSLVILVNATS 72
Query: 56 NLKSQIIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
+S I L P I ++PA R +Y SG I VT RIL+VD+L++R+PT
Sbjct: 73 EEESGIGEELTTLGIRKPGLRAIHHEMPAKQRSEMYLSGGIMSVTSRILVVDMLSKRIPT 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ + GL++L+ +T S E FI RI + N+E +++AF+D P G + + ++ L
Sbjct: 133 ALITGLVVLHAEKVTPTSVEAFIARIYRQENKEGFMKAFTDNPEHFTMGISPLQTVLSQL 192
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN- 232
IRK+ LWPRF S++L + V+++ P+S+ M IQ AI+E +DA L E+++ N
Sbjct: 193 RIRKVELWPRFHQQTSKDLGQRKADVIELHQPLSRSMRNIQTAIIECLDASLSELKRGNA 252
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
V+ +D ++E+ +F++FD ++RRQLDPIWH + KTKQLV DL TLR LL+YL+ YD VT
Sbjct: 253 NVETDDFSIEHAIFRAFDVMVRRQLDPIWHRVSAKTKQLVGDLTTLRNLLNYLLTYDCVT 312
Query: 293 YLKYLDTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ YL+T+ S + +S W+F +++ IF AKKR Y + + E N S
Sbjct: 313 FNSYLETILASNTTSLRGNARQNQSAWLFMDAANVIFHEAKKRAYIWDEARRREANDASD 372
Query: 344 S-VTGKKRKLKKVDNNEDEDGGTSSTS-TKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
+ + L++ ++ G + +E +LEE PKW++L+EVL+E+E+E
Sbjct: 373 AHYADDEEALRQAEHGAAAQSGAPALGPIPPEVEPILEENPKWQLLQEVLDEVEQEIHFT 432
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSE--------KVMREEWEKYL 453
++ E +L+ C E + MQL I E K++R+ Y
Sbjct: 433 STGSET---------SNTILIMCGSERTSMQLRQIIATMDECPPGEPGQKLLRQLLRSYF 483
Query: 454 LSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIR 513
L K L + SS + S +P G A AQ A AS E A K+
Sbjct: 484 LWKGGLGKL--SSDQGASNQPGGDS---RSAYSSTAQRATASDGPVNE-----ALKRKLA 533
Query: 514 NQ-GKSDDGDNPETYYGSKGPGRGRGK---GRNRNGPACVPQSANKDSKSNSKAAIEDKP 569
Q G+ + + G G+ + +G A A + S+ + AA
Sbjct: 534 YQKGQQSNANKRRRQRGGSSAAHAGGRFSSATDASGQASFQAEAAQVSEFLASAA----- 588
Query: 570 EISGSGNEGPADEIHSGVVGYSGGMLETAFVE---KEVQWKRSLKTDTAESKDSKPVPPV 626
NEG A G + +++ + EV++ + E+ + V
Sbjct: 589 ----DSNEGRA--------GLADAPIDSEQISDDIDEVEFDAFFGMLSMEN-----LVVV 631
Query: 627 HFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQK 686
Y + D +L L+P +++Y PD +FVR++EVY++ NP + ++VYFL Y DS E Q+
Sbjct: 632 RSYRGDQDDKVLQELRPRFVIMYDPDPAFVRRVEVYRSTNPGVGIRVYFLIYADSVEEQR 691
Query: 687 FKAGIRRENGAFESLIRQKSFMMIPI 712
+ + +RRE +FE LIR+KS M +P+
Sbjct: 692 YLSSLRREKESFERLIREKSMMALPL 717
>gi|320165280|gb|EFW42179.1| DNA repair helicase RAD25 [Capsaspora owczarzaki ATCC 30864]
Length = 1243
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 242/814 (29%), Positives = 395/814 (48%), Gaps = 123/814 (15%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + A+LL E GL I++ GL + +L+ + + + Q +L+L +P+ + +
Sbjct: 168 LLEYEREAYAQLLAE--DGLCIMARGLGIDRLLQAFIQQYCDPQVLVLVLGCTPDEEQAM 225
Query: 62 IHYL---------APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLP 112
I L +A LP + + + R LY G IFF+TPRILIVD+L +R+P
Sbjct: 226 IAELREIARLDGVPEDAAFLPRVLDNTVSSAARCDLYMQGGIFFITPRILIVDMLKKRIP 285
Query: 113 TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKS 172
++ GL++ H + + STE FI R+ + NRE +I+AFS P A + GF + E++MK+
Sbjct: 286 IHHITGLLVHRAHKVVDTSTEAFIIRLFRHSNREGFIKAFSSAPEAFLPGFMRIEKVMKA 345
Query: 173 LFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
L+IR+L+LWPRFQ V + LE V++ M+ M IQ+AI+E+MDAC++E++ N
Sbjct: 346 LYIRRLYLWPRFQQLVIDTLESHHIEPVEIYPEMTDSMTVIQRAIVEIMDACIREVKTDN 405
Query: 233 -KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++V++LTVENGLF SFD ++R+QLDPIWH + KT+QLV+DL TLRKLL YL YD V
Sbjct: 406 PTIEVDNLTVENGLFASFDHLIRQQLDPIWHRVSPKTRQLVTDLSTLRKLLSYLYEYDCV 465
Query: 292 TYLKYLDTLRVS-ESF--RSVWIFAESSYKIFDYAKKRVY-------------------R 329
T+ +L+ LR S +F S+W+F +++ ++F+ ++KRVY +
Sbjct: 466 TFYVFLEALRTSYRAFGEYSLWVFMDAANRLFEESRKRVYLHRASSLASSSTASVAGGVK 525
Query: 330 FTRSDGVELNGQSKSVTGKK----------------RKLKKVDNNEDEDGGTSSTSTKVV 373
R D + + V G + ++ + +E D +V
Sbjct: 526 RARLDTPQSHALPPPVVGARSAFALASVAAPLAADEQRERARAQSESLDRAVVQNPDQVP 585
Query: 374 LEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG--------------------- 412
++ VLEE PKW+ L VL+EI++ +S+ + G
Sbjct: 586 IDLVLEENPKWRELLLVLKEIDD--TNNVTSKGRAISSGFLSQDDIESSQGKRGGSVTVT 643
Query: 413 --EENDH---------------GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLS 455
EE D VLV DE + +QL++ I G ++ +++ +L
Sbjct: 644 RPEETDSIPIPIPMDADSARPDNTVLVLVADERTALQLQEYIAVGGPTMLERIFQRQMLW 703
Query: 456 KVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQ 515
K R + + + P PV A+ + A++ + +A + + + +
Sbjct: 704 K---RDLLKMTGRGGFSAPGVQSTT--TTPVFAAKRSTANTATS---NAFMPSRASMGAA 755
Query: 516 GKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSK-----SNSKAAIEDKPE 570
G G+N R R K R S + D + + A+E P
Sbjct: 756 GAVGSGNN--------AASRRRAKLSERVAAKRAAASRSTDDNPAVDDPSEEDAVEGHPS 807
Query: 571 ISGSGNEG---PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKD-SKPVPPV 626
+ S + P+D S + S M+ + K D S+ P P
Sbjct: 808 DAPSQSRKRTYPSDAFQSNITIDS--MIHAIDTHASQNEASASKADAPPSEPFFAPATPF 865
Query: 627 HFYA---LESDQPILDILK---PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYED 680
+A LE + + +LK P +V++ P+ VRQ+EV+K P+I L++Y L Y+
Sbjct: 866 VIHAIRGLEGKRSLFQVLKAVDPIFVVLFDPEPWVVRQLEVFKCTRPAIPLRIYMLVYKT 925
Query: 681 STEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
S E Q++ IR+E AF +LI +KS M +P+DQ
Sbjct: 926 SVEEQRYLTSIRKEKDAFLALIYEKSMMAVPVDQ 959
>gi|326928825|ref|XP_003210574.1| PREDICTED: DNA repair endonuclease XPF-like [Meleagris gallopavo]
Length = 856
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 336/648 (51%), Gaps = 98/648 (15%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP +T ++P++ R+ Y+ G + F T RIL+VD LT R+P + + G+++ H + E+
Sbjct: 26 LPRRVTNEVPSSTRYEFYTHGGVLFATSRILVVDFLTDRIPANLITGVLVYKAHRIIESC 85
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E+FI R+ + N+E +I+AF+D A +GF + ER+M++LF+RKL+LWPRF + V+
Sbjct: 86 QESFILRLYRQKNKEGFIKAFTDNAVAFNTGFCQVERVMRNLFVRKLYLWPRFHIAVNSF 145
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFD 250
LE+ P VV++ V M+ M IQ +IL++++ACL+E+++ N ++VEDL++EN L K+FD
Sbjct: 146 LEKHKPEVVEIHVSMTPSMLAIQTSILDILNACLRELKRYNPALEVEDLSLENALGKAFD 205
Query: 251 EILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE-SF--R 307
+ + LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++L+ SE +F
Sbjct: 206 KTICHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLLESLKASEKAFGEN 265
Query: 308 SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSS 367
S W+F +SS +F A+ RVYR +LN + K + R +KK
Sbjct: 266 SGWLFLDSSTSMFVNARARVYRIADE---KLNQKGK--VSENRDVKK------------- 307
Query: 368 TSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDE 427
++ E VLE PKW+ LREVL EIE E ++ L G G VL+ D+
Sbjct: 308 -ENELKRELVLESNPKWEALREVLNEIENE------NKNSEGLGGP----GQVLICASDD 356
Query: 428 CSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVK 487
+C QL + I +G+E + + K L K +K+ E
Sbjct: 357 RACAQLREYITDGAEAFLMRLYNKTL------------GKDEKAGE-------------- 390
Query: 488 IAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPA 547
K R KS P+T GP + K P
Sbjct: 391 --------------------VWIKDRKVVKSKGNARPDT-----GPQAKKAK-----LPT 420
Query: 548 CVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWK 607
C Q NK K + + ++ +I E E + + G G +E E +
Sbjct: 421 CSKQ--NKRKKQHDQTIVQMIGKIEKENREELDVEDNKELNGSQEGSIEETIPE---DFP 475
Query: 608 RSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYK 663
+L +D+ P+ +H SD +L ++P +++Y +++FVRQ+E+YK
Sbjct: 476 VNLPSDSYYGIFKNPLTIIHPLQGCSDPYALTRVLHEVEPRYVILYDAELTFVRQLEIYK 535
Query: 664 AENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
A P L+VYFL Y STE Q++ +R+E AFE LIR+++ M++P
Sbjct: 536 ASRPGKPLRVYFLIYGSSTEEQRYLTALRKEKEAFEKLIRERASMVVP 583
>gi|317419185|emb|CBN81222.1| DNA repair endonuclease XPF [Dicentrarchus labrax]
Length = 876
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 229/716 (31%), Positives = 368/716 (51%), Gaps = 113/716 (15%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + L + GL++ + G+ + +++ + ++S +LLL+++ +
Sbjct: 5 LLEFETEMFLSLFS--SDGLLVAAEGMGIDRILLQFMRVYSEQDSLVLLLNTTTPEQEYF 62
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L LP +T+D + R+ +Y++G + FVT RIL+VD LT R+P ++G++
Sbjct: 63 TEQLRIEGVTHLPRTVTSDFQSTERYNVYTAGGVLFVTSRILVVDFLTDRIPADLISGIL 122
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+DK TA SGF + ER+M++LF++KL+L
Sbjct: 123 VYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKLYL 182
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
FQ +V+ L+R P VV++ V ++ M IQ +IL++M ACLKE+++ N ++ EDL
Sbjct: 183 ---FQASVNTALDRHKPEVVELNVSLTPAMRAIQSSILDIMGACLKELKRYNPTLEAEDL 239
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L +FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+ L++
Sbjct: 240 SLENTLGSAFDKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFFNLLES 299
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR S+ S W+F +SS +F A+ RVY S K+KLK
Sbjct: 300 LRSSQKIFGSNSGWLFLDSSTSMFVNARGRVYHIPES---------------KKKLKV-- 342
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ + SS + +V VLE++PKW+ L EVL+EIE+E +++
Sbjct: 343 -GAEAEKPKSSPALEVKRRLVLEKSPKWEALTEVLQEIEKEN------------KSSQHE 389
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
G VL+ D+ +C QL+ IR+GS+ +LL+++ R++
Sbjct: 390 PGPVLICASDDRTCAQLQQYIRHGSD---------WLLNRLYARTI-------------- 426
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
G LD A AAA ++ + K +KG +
Sbjct: 427 -GKLDSAA----------------------AAAFELDSHKK------------AKGWPKK 451
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLE 596
KG+ PA Q N S + K +P ++ + G + V+G SG E
Sbjct: 452 GAKGKE---PA---QKKNAKSTKSKK-----RPTLTLTQMVGKEETDEVPVMGSSGDDDE 500
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPD 652
E+E + K L +D +P+ +H +D +L ++P +V+Y +
Sbjct: 501 LMEEEEEEELKMDLSSDAYYGVLKEPLTVIHPLKGLTDPHSLTRVLHEVEPSFVVLYDAE 560
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
+SFVRQ+E+YKA P L+VYFL Y STE QK+ + +E AFE LIR +SF+
Sbjct: 561 LSFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQKYLTALSKEKKAFEHLIRSESFL 616
>gi|307107063|gb|EFN55307.1| hypothetical protein CHLNCDRAFT_134272 [Chlorella variabilis]
Length = 1167
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 255/430 (59%), Gaps = 35/430 (8%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLH-----SPSQ-GTLLLLSSS 54
++L F + ++ ELL+E GL +LS GL L ++A +L L P Q G +L+L +S
Sbjct: 81 VLLPFQRAMVEELLEE--DGLCVLSPGLGLHHVVAVLLRLQDARLRQPGQRGCVLVLGAS 138
Query: 55 PNLKSQIIHYLAPNAPLL--------------------------PSEITADLPANHRHTL 88
P + + L P++ P E+ A++ A R L
Sbjct: 139 PWQRDALRRELLRIDPVIRAKAQAVAAGRAASAAGARAAAAFEVPGEVRAEVAAAERQAL 198
Query: 89 YSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAY 148
Y+S FVT RIL+VD L+ R+ +AG+++LN H +T++S E F R+ K+ E
Sbjct: 199 YASRSCLFVTTRILVVDQLSGRISGGQVAGMVVLNAHRVTDSSGEGFAVRLYKAACPEGV 258
Query: 149 IRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSK 208
+RAFSD P++ S F K E++MK+L++R+L+LWPRFQ E+LE PP +V++ PMS
Sbjct: 259 VRAFSDVPSSFSSEFNKVEKVMKALYVRRLYLWPRFQAQAREDLEARPPQLVELSQPMSS 318
Query: 209 YMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKT 268
MG + +AI E+MDAC++E+RKTNK+D DLTVE GLF+SFDE +RRQL PIWH + KT
Sbjct: 319 AMGLMYEAITELMDACVRELRKTNKLDTSDLTVEQGLFRSFDEAVRRQLAPIWHTVSPKT 378
Query: 269 KQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVY 328
+Q+V+DL+TLR L Y++R+DAVT++ YLD LR +E +SVW+F +++ IF+ AK RVY
Sbjct: 379 RQIVADLRTLRGLASYMLRFDAVTFMSYLDNLRATEGVKSVWLFHSAAHTIFEAAKSRVY 438
Query: 329 RFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLR 388
R + G + + G V+E VLE PKW +LR
Sbjct: 439 RL-KQGGTAAAAAQRKRKAPLGGGEPDAAAAAAASGGGGPGPAPVIEAVLESMPKWDLLR 497
Query: 389 EVLEEIEEER 398
EV+EEI++ER
Sbjct: 498 EVMEEIQQER 507
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 626 VHFYALES-DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEV 684
V F ALE+ D L P +VVY PD++F R +E+YKA P L VY L YEDS E+
Sbjct: 793 VRFVALEAHDVMALWEAAPGYVVVYDPDVAFTRHLELYKAARPGQPLCVYLLRYEDSFEM 852
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIPI 712
+++A + RE FESLIR K M++PI
Sbjct: 853 DRYQAAVARERQVFESLIRNKEIMILPI 880
>gi|388854501|emb|CCF51888.1| related to RAD1-component of the nucleotide excision repairosome
[Ustilago hordei]
Length = 963
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 225/745 (30%), Positives = 363/745 (48%), Gaps = 106/745 (14%)
Query: 2 VLEFHQHIIAELL----QEPNGG--LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP 55
+L FH I+ L+ P+ G LVI++ GL L ++++++L ++ ++L++++
Sbjct: 13 LLPFHCQIVNSLVPSQDDSPDEGDALVIIARGLGLRRIVSTILRIYDSPNSLVILVNATS 72
Query: 56 NLKSQIIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
+S I L P I ++PA R +Y SG I VT RIL+VD+L++R+PT
Sbjct: 73 EEESGIGEELTTLGVRKPGLRAIHHEMPAKQRSEMYLSGGIMSVTSRILVVDMLSKRIPT 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ +T S E FI RI + N+E +++AFSD P G + + ++ L
Sbjct: 133 GLITGLVVLHAEKVTPTSVEAFIARIYRQENKEGFLKAFSDNPEHFTMGISPLQTVLSQL 192
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN- 232
+RK+ LWPRF S++L + V+++ P+S+ M IQ AI+E +DA L E+++ N
Sbjct: 193 HVRKVELWPRFHQQTSKDLGQRKADVIELHQPLSRSMRNIQTAIIECLDASLSELKRGNS 252
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
V+ +D ++E+ +F++FD ++RRQLDPIWH + KTKQLV DL TLR LL+YL+ YD VT
Sbjct: 253 NVETDDFSIEHAIFRAFDVMVRRQLDPIWHRVSPKTKQLVGDLTTLRNLLNYLLTYDCVT 312
Query: 293 YLKYLDTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ YL+T+ S + +S W+F +++ IF AKKR Y +
Sbjct: 313 FNSYLETILASSTTTLKGTTRQNQSAWLFMDAANVIFHEAKKRAYIW------------- 359
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
D+ D+ G +E VLEE PKW +L+EVL+E+E
Sbjct: 360 ------------DDARDQQGPIPPE-----VEPVLEENPKWHLLQEVLDEVE-------- 394
Query: 404 SREEVLLDGEENDHG---IVLVACKDECSCMQLEDCIRNGSE--------KVMREEWEKY 452
+E+ + + +D G +L+ C E + MQL I E K+M + Y
Sbjct: 395 --QEIHFNIDASDSGAANTILIMCGSERTSMQLRQIISTMDECPPGQPGKKLMHQLLRSY 452
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKGYGI--LDGVAPVKIAQNAEASSVSKQEHDALLAAAS 510
K L + ++ + + G G +P N EA +AA+
Sbjct: 453 FFWKGGLGKLNADQREGQGNQQPGSSTNAAQGSSPQSGPIN-EALKRKLAYQKGQQSAAN 511
Query: 511 KIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIE---D 567
K R Q + + S G+ ++ S N + +E D
Sbjct: 512 KRRRQRGGSSAQHAAGRFSSATDAAGQASLHAEAAHVSDFIASAAASGENGSSTLEAPID 571
Query: 568 KPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVH 627
+IS DEI GML +E V V
Sbjct: 572 AEQIS--------DEIDEVEFDAFFGMLS---MENLVV--------------------VR 600
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
Y + D +L L+P +++Y PD +FVR++E+Y++ NP + ++VYFL Y DS E Q++
Sbjct: 601 SYRGDQDDKVLQELRPRFVIMYDPDPAFVRRVEIYRSTNPGVGVRVYFLIYADSVEEQRY 660
Query: 688 KAGIRRENGAFESLIRQKSFMMIPI 712
+ +RRE +FE LIR+KS M +P+
Sbjct: 661 LSALRREKESFERLIREKSMMALPL 685
>gi|255079504|ref|XP_002503332.1| predicted protein [Micromonas sp. RCC299]
gi|226518598|gb|ACO64590.1| predicted protein [Micromonas sp. RCC299]
Length = 965
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 278/458 (60%), Gaps = 26/458 (5%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGT---LLLLSSSPNLK 58
VL+F Q I+ ELL+ GL ++ GL L +++A +L H+ G L+L + N
Sbjct: 43 VLQFQQDIVDELLE--RDGLTCIAEGLGLVEILALLLKEHTYRVGAGAVLILGLNEFNRT 100
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ +H P P ITA++ N R +Y +G FVT RI VD+L + LP SN+ G
Sbjct: 101 ALKVHCKMHGMPY-PPVITAEVTGNRREEIYRNGGPMFVTTRIAAVDILREALPPSNIQG 159
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+I+ N H +T+ S E F+ R+ +S NR ++RA +D+P + GF+K +++MK L R+L
Sbjct: 160 VIVANGHRVTDMSQEAFVVRLFRSGNRRGFLRALTDRPGDLTRGFSKVDQVMKCLMTRQL 219
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
+LWPRFQ+ V L+ P VV++R P+S + IQ+AI++VM+ C+ E++K+ VD +
Sbjct: 220 NLWPRFQLVVRACLDAHAPEVVELRQPLSNRVKKIQEAIVQVMEECMTELKKSKHVDTSE 279
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE GLFKSFD I++RQLDP+W+++ ++ KQ+V DL+TLR L ++L+RYDAVT+L+YL+
Sbjct: 280 LTVEAGLFKSFDRIIQRQLDPVWNVVSRRVKQVVWDLRTLRNLANFLLRYDAVTFLRYLE 339
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTR---SDGVELNGQSKSVTGKKRKLKKV 355
TLR++E S+W+F + ++ IF+ +++RVY + S G E G+ V GK+
Sbjct: 340 TLRLTEGSMSMWMFTQHAHTIFEQSRRRVYALRKPPASGGPEGLGEGSGVGGKR------ 393
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
ST L VLE PKW+++ E+++EI++++ K E + E
Sbjct: 394 --------AAPPESTAPALHMVLEPMPKWRLIEEIVKEIDDDKEKLLRKMENL---AERY 442
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
G L+ KDE + QL + GS+ +MR WEKYL
Sbjct: 443 GQGPTLIVAKDEAAASQLTGMLLRGSDGLMRLIWEKYL 480
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 57/89 (64%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
++ +AL +L ++P I+V+ PD +F+R+IEV+ A P +++VYF+ ++ S E Q
Sbjct: 611 IYVHALTDRAAVLATVRPSFIIVHDPDAAFIREIEVHAAHRPGARMRVYFMVHDTSVEEQ 670
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ + I E+ +F +LIR K+ +P +Q
Sbjct: 671 RYLSQINYESDSFANLIRGKAHAAMPFEQ 699
>gi|319411541|emb|CBQ73585.1| related to RAD1-component of the nucleotide excision repairosome
[Sporisorium reilianum SRZ2]
Length = 967
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 222/747 (29%), Positives = 375/747 (50%), Gaps = 106/747 (14%)
Query: 2 VLEFHQHIIAELLQEPNG------GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP 55
+L FH I+ L+ P+ LVI++ GL L ++++++L ++ ++L++++
Sbjct: 13 LLPFHCQIVDSLVPGPDDSPDEGDALVIIARGLGLRRIVSTILRIYDSPNSLVVLVNATS 72
Query: 56 NLKSQIIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
+S I L P I ++PA R +Y SG I VT RIL+VD+L++R+PT
Sbjct: 73 EEESGIGEELTTLGVRKPGLRAIHHEMPAKQRSEMYLSGGIMSVTSRILVVDMLSKRIPT 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ +T S E FI RI + N+E +++AFSD P G + + ++ L
Sbjct: 133 GLITGLVVLHAEKVTPTSVEAFIARIYRQENKEGFLKAFSDNPEHFTMGISPLQTVLSQL 192
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN- 232
IRK+ LWPRF S++L + V+++ P+S+ M IQ AI+E +DA L E+++ N
Sbjct: 193 RIRKVELWPRFHQQTSKDLGQRKSDVIELHQPLSRSMRNIQTAIIECLDASLSELKRGNA 252
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
V+ +D ++E+ +F++FD ++RRQLDPIWH + KTKQLV DL TLR LL+YL+ YD VT
Sbjct: 253 NVETDDFSIEHAIFRAFDVVVRRQLDPIWHRVSAKTKQLVGDLTTLRNLLNYLLTYDCVT 312
Query: 293 YLKYLDTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ YL+T+ S + +S W+F +++ IF AK+RVY + S
Sbjct: 313 FNSYLETILASSTTTFKGTTRQNQSAWLFMDAANVIFHEAKRRVYIWDES---------- 362
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ R+ +E VLE PKW++L+EVL+E+E
Sbjct: 363 ----RTREPPP------------PEDLPPEVEPVLEANPKWQLLQEVLDEVE-------- 398
Query: 404 SREEVLLDGEENDHG---IVLVACKDECSCMQLEDCIRNGSE--------KVMREEWEKY 452
+E+ + +D G +L+ C E + MQL I + E K+M++ Y
Sbjct: 399 --QEIHFNIAASDVGAGNTILIMCGSERTSMQLRQIISSMDECPPGESGKKLMQQLLRSY 456
Query: 453 LLSKVQLRSVQ------TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALL 506
L K L + T++ ++ G L P+ A +A+ Q+
Sbjct: 457 FLWKGGLGKLNGEQKDGTANGDTRTAPNAAQGNLPQAGPINEALKRKAAFQRGQQ----- 511
Query: 507 AAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAA-I 565
++A+K R Q RG ++ G A + ++AA +
Sbjct: 512 SSANKRRRQ-------------------RGGSSAQSAGGRFSSATDAAGQANFQAEAAQV 552
Query: 566 EDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPP 625
D + +GNE + + + + + + EV++ + E+ +
Sbjct: 553 SDFIASAANGNENGSSTVEAPLDAE-----QISDDIDEVEFDAFFGLLSMEN-----LVV 602
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y + D +L L+P +++Y PD +FVR++EVY++ NP + ++VYFL Y DS E Q
Sbjct: 603 VRSYRGDQDDKVLQELRPRFVIMYDPDPAFVRRVEVYRSTNPGVGVRVYFLIYADSVEEQ 662
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE +FE LIR+KS M +P+
Sbjct: 663 RYLSALRREKESFERLIREKSMMALPL 689
>gi|403158245|ref|XP_003890826.1| hypothetical protein PGTG_20630 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163738|gb|EHS62509.1| hypothetical protein PGTG_20630 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1039
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 238/771 (30%), Positives = 392/771 (50%), Gaps = 112/771 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGT------LLLLSSSP 55
+L F I+ EL ++ GL+IL+ GL L +I+S L H T + +++++
Sbjct: 11 LLAFQGKILKELNEK--DGLLILARGLGLRTIISSFLKAHCARASTTSARPLVFVINATT 68
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
+ ++ I +L + EI+A + R ++ G + +T RILIVD+L ++ S
Sbjct: 69 DDETGINDFLGMRMACIGHEISA----SERERIFKQGGVLSITSRILIVDMLNSKVELSQ 124
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ G++IL+ ++ S E FI R+ + N + +I+AFS++P GF+ + ++ L I
Sbjct: 125 ITGIVILHAEEVSPTSIEAFILRVFRKSNIKGFIKAFSEEPEHFTFGFSPLQTVLSQLKI 184
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KV 234
R + LWPRF+V + E+ E P V+++ PMS M IQ AI+E MDA L E+R+ N +
Sbjct: 185 RNVFLWPRFRVEIKEDFEAMKPQVIELHQPMSPAMIEIQTAIIECMDATLAEIRRGNTNL 244
Query: 235 DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294
+V+DLT++N L +SFD+I+R QL+PIWH + KTKQLVSDLKTLR+LL YL+ +D +T+
Sbjct: 245 EVDDLTIDNALHRSFDQIIRNQLNPIWHRVSFKTKQLVSDLKTLRQLLSYLLAFDCITFY 304
Query: 295 KYLDTLRVSESFR----------SVWIFAESSYKIFDYAKKRVYRFTRS--------DGV 336
++L+T+ V+ S + S W+F ++ IF AK RVY T+ D
Sbjct: 305 RFLETILVANSPKETAAGPRQNESQWLFTSAADTIFSVAKNRVYVKTQDRKKQAAVVDSN 364
Query: 337 EL----NGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVV----------LEEVLEEAP 382
E+ +G + R++++V N E G + V E VLE P
Sbjct: 365 EISILEDGPTAEEEEAMREIEEVALNAAERAGYDVSRFNVSSDTWGWLPPDTEPVLENQP 424
Query: 383 KWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI----- 437
KW++L++VL+EIEE L +A+ E V G E + I L+ C +C L++ +
Sbjct: 425 KWQLLKDVLKEIEEN-LYEAAEAETV---GSEESNAI-LIMCSSASTCSVLKEYLATQHA 479
Query: 438 ----RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAE 493
+ G+ +M+ Y K R++ S+ ++ +EP +AP
Sbjct: 480 SSDAKYGTRPMMKRRLRDYFFWK---RTIGKMSRNQQ-QEP--------LAP-------- 519
Query: 494 ASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGS----KGPGRGRGKGRNRNGPACV 549
SS + D+ L AA K +N+ + TY +G G +R+ P +
Sbjct: 520 -SSKTNTADDSALNAALKRKNEYQ-----RKATYLNKRRRVRGASNAANSGNSRDNP--L 571
Query: 550 PQSANKDSKSNSKAAIE-----DKPEISGSGNEGPA--DEIHSGVVGYSGGMLETAFVEK 602
S D+++ K AIE D + + PA DE G+ + + FV
Sbjct: 572 DLSKPNDAETVEKEAIEVADLFDSMTSASTFQNDPARTDEATDGLT--TDDFDPSDFVA- 628
Query: 603 EVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVY 662
D D + + Y + D +L+ L+P +++Y PD+ FVR++E +
Sbjct: 629 --------HFDMLSMND---LVVIQVYLGDEDDSVLEELRPSHVIMYEPDVGFVRRVECF 677
Query: 663 KAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
+ +P + +K YFL Y +S E QK+ + IRRE +FE LIR+ S M+IP++
Sbjct: 678 RLRHPELNVKPYFLMYSESVEEQKYLSNIRREKESFERLIRENSTMVIPLE 728
>gi|406861536|gb|EKD14590.1| MUS38-like protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 934
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 227/728 (31%), Positives = 362/728 (49%), Gaps = 100/728 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
L++ Q I EL Q+ LVI++ GL L +LI ++L + + L++L +
Sbjct: 17 LKYQQEIFQELRQKDE--LVIIARGLGLLRLITNLLHSYDAAGNNLIILVGADERENGWI 74
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L ++P A L T ++ R +YS G I+ VT RIL+VDLLT L
Sbjct: 75 GEALAEHAAISMSPRARGLSVVNTENMSVGTREKMYSQGGIYSVTSRILVVDLLTSLLNP 134
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GFA +M++L
Sbjct: 135 ETITGVVVLHAERIVATSLEAFILRIYRQKNKVGFLKAFSDSPEPFTTGFAPLSSMMRNL 194
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+R LWPRFQV V++ LE ++ V+++ VPMS+ M IQ AI+E ++ + E++K+N
Sbjct: 195 FLRNASLWPRFQVVVAQALEGKKKAEVIELEVPMSESMCDIQTAIMECVEVSIGELKKSN 254
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+++ED +++ L K FD ++RRQLDP+WH + KTKQ+V+DL LR +L L+ YD+V
Sbjct: 255 SGLEMEDWNLDSALHKQFDMVVRRQLDPVWHRVSWKTKQIVNDLTVLRGMLHTLLTYDSV 314
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ ++LDT+ + S +S W+F ++++ IFD AK+RVY
Sbjct: 315 SFNRHLDTILAAHSPPPGSTRQNQSPWLFLDAAHTIFDTAKRRVY--------------- 359
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK GT + T L VLEE PKW VL EVLEEI+ +
Sbjct: 360 --TGKA-------------SGTENLET---LRTVLEEQPKWAVLAEVLEEIDRDLYFNPV 401
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
R++ +G +L+ C D C QL++ ++N V+ +V
Sbjct: 402 VRDD--------SNGTILIMCSDTAQCRQLKEYLQN---------------MHVRPDTVG 438
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
+ + EP ++ + E + +S AL K+ + + G N
Sbjct: 439 QDDEDDEEHEPSAAFMMRRKLRAYLKWKNEFAKISA----ALFTENQKVLDGTANQKGAN 494
Query: 524 PETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKP-EISGSGNEGPADE 582
T + K P R + R P A + S A EDKP E++ +E E
Sbjct: 495 --TSFRGKAPSNKRRRVRGGGNTGSAPSRA----ANGSIQAAEDKPLEVATLMSEIQPTE 548
Query: 583 IHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILK 642
+E A E V D + D+K + +H Y + D+ +L+ +K
Sbjct: 549 ------------MEAAQKEDIVADPLDDMEDYYQLYDTKDLVVIHAYDGDMDEHVLEEVK 596
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y PD SFVR++EVY++ + ++VYFL+Y S E Q++ + +RRE AF LI
Sbjct: 597 PRYIIMYEPDTSFVRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSSVRREKDAFTKLI 656
Query: 703 RQKSFMMI 710
++KS M I
Sbjct: 657 KEKSNMSI 664
>gi|331212581|ref|XP_003307560.1| rad16 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 1153
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 238/780 (30%), Positives = 393/780 (50%), Gaps = 121/780 (15%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGT------LLLLSSSP 55
+L F I+ EL ++ GL+IL+ GL L +I+S L H T + +++++
Sbjct: 11 LLAFQGKILKELNEK--DGLLILARGLGLRTIISSFLKAHCARASTTSARPLVFVINATT 68
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
+ ++ I +L + EI+A + R ++ G + +T RILIVD+L ++ S
Sbjct: 69 DDETGINDFLGMRMACIGHEISA----SERERIFKQGGVLSITSRILIVDMLNSKVELSQ 124
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ G++IL+ ++ S E FI R+ + N + +I+AFS++P GF+ + ++ L I
Sbjct: 125 ITGIVILHAEEVSPTSIEAFILRVFRKSNIKGFIKAFSEEPEHFTFGFSPLQTVLSQLKI 184
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--- 232
R + LWPRF+V + E+ E P V+++ PMS M IQ AI+E MDA L E+R+ N
Sbjct: 185 RNVFLWPRFRVEIKEDFEAMKPQVIELHQPMSPAMIEIQTAIIECMDATLAEIRRGNTNP 244
Query: 233 -------KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYL 285
+++V+DLT++N L +SFD+I+R QL+PIWH + KTKQLVSDLKTLR+LL YL
Sbjct: 245 CSSSPKYQLEVDDLTIDNALHRSFDQIIRNQLNPIWHRVSFKTKQLVSDLKTLRQLLSYL 304
Query: 286 VRYDAVTYLKYLDTLRVSESFR----------SVWIFAESSYKIFDYAKKRVYRFTRS-- 333
+ +D +T+ ++L+T+ V+ S + S W+F ++ IF AK RVY T+
Sbjct: 305 LAFDCITFYRFLETILVANSPKETAAGPRQNESQWLFTSAADTIFSVAKNRVYVKTQDRK 364
Query: 334 ------DGVEL----NGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVV---------- 373
D E+ +G + R++++V N E G + V
Sbjct: 365 KQAAVVDSNEISILEDGPTAEEEEAMREIEEVALNAAERAGYDVSRFNVSSDTWGWLPPD 424
Query: 374 LEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQL 433
E VLE PKW++L++VL+EIEE L +A+ E V G E + I L+ C +C L
Sbjct: 425 TEPVLENQPKWQLLKDVLKEIEEN-LYEAAEAETV---GSEESNAI-LIMCSSASTCSVL 479
Query: 434 EDCI---------RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVA 484
++ + + G+ +M+ Y K R++ S+ ++ +EP +A
Sbjct: 480 KEYLATQHASSDAKYGTRPMMKRRLRDYFFWK---RTIGKMSRNQQ-QEP--------LA 527
Query: 485 PVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGS----KGPGRGRGKG 540
P SS + D+ L AA K +N+ + TY +G G
Sbjct: 528 P---------SSKTNTADDSALNAALKRKNEYQ-----RKATYLNKRRRVRGASNAANSG 573
Query: 541 RNRNGPACVPQSANKDSKSNSKAAIE-----DKPEISGSGNEGPA--DEIHSGVVGYSGG 593
+R+ P + S D+++ K AIE D + + PA DE G+ +
Sbjct: 574 NSRDNP--LDLSKPNDAETVEKEAIEVADLFDSMTSASTFQNDPARTDEATDGLT--TDD 629
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDM 653
+ FV D D + + Y + D +L+ L+P +++Y PD+
Sbjct: 630 FDPSDFVA---------HFDMLSMND---LVVIQVYLGDEDDSVLEELRPSHVIMYEPDV 677
Query: 654 SFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
FVR++E ++ +P + +K YFL Y +S E QK+ + IRRE +FE LIR+ S M+IP++
Sbjct: 678 GFVRRVECFRLRHPELNVKPYFLMYSESVEEQKYLSNIRREKESFERLIRENSTMVIPLE 737
>gi|328766197|gb|EGF76253.1| hypothetical protein BATDEDRAFT_30944 [Batrachochytrium
dendrobatidis JAM81]
Length = 942
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 364/739 (49%), Gaps = 117/739 (15%)
Query: 20 GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSS----PNLKSQIIHYLAPNAPLLPSE 75
GLVI++ GL + +L+++++ +H+ +LL++ S LK + A A + SE
Sbjct: 15 GLVIMARGLGIERLLSTIIQIHTDPHTLVLLVNLSLADFDRLKQSVCD--AAEAIGVLSE 72
Query: 76 -------------ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL 122
+ +++ + R LY +G + VT +IL++D+L + LPT + G+++
Sbjct: 73 ADGGCIRPDLFVFVNSEISSVKRSELYLAGGVLAVTSQILVLDILNKVLPTHLVTGILVN 132
Query: 123 NTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP 182
N H + + STE FI R+ + N+ +I+AFS+ P A V GFA ER MK L++R ++ WP
Sbjct: 133 NAHQVRDVSTEAFILRLYRDENKVGFIKAFSENPEAFVGGFATLERTMKVLYLRSVYFWP 192
Query: 183 RFQVNVSEELEREPPV-VVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
RF V V E L+ V +V++R+PM+K M IQ AIL+ + CL E+++ N ++ E+
Sbjct: 193 RFHVLVKESLDTNGSVELVELRIPMTKRMKEIQAAILDCLHECLLEVKRLNPTLETEEFK 252
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
+EN LFKSFD +R QLDPIWH + KTKQLV+DL LR+LL YLV YDAVT+ +L+T+
Sbjct: 253 LENALFKSFDTTIRIQLDPIWHRVSTKTKQLVNDLHVLRQLLSYLVSYDAVTFYSFLETI 312
Query: 301 RVSE-----------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
+ + S W+ ++++ +F K+RVY+ S
Sbjct: 313 MTANAAATTSIYKRGAVESPWLLLDAAHTVFSMGKERVYKQLPS---------------- 356
Query: 350 RKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVL 409
NE + G + + + E VLEE PKW+ + EVL+E+ +ER K +
Sbjct: 357 -------TNESQQGPLNGILSNI--EPVLEEQPKWRAIVEVLKEVLKEREKIGNV----- 402
Query: 410 LDGEENDHGIVLVACKDECSCMQLEDCIRN-GSEKVMREEWEKYLLSKVQLRSVQTSSKK 468
G +L+ + +C Q+ I N GS + + K Q S+
Sbjct: 403 --------GNILIILTGDRACRQIRSIIENMGSSTTVSPDTVKN----------QKSADG 444
Query: 469 KKSKEPKGYGILDGVAPVKIA----QNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNP 524
K S+ + + + ++ QN + + L S + +++ P
Sbjct: 445 KSSRSKASHRMFSSIGSEQLMNHFFQNYLRWKKNMPDVSKTLQDGSALSTTTQNNSAIQP 504
Query: 525 ETYYGSKGPGRGRGKGRNRNGPACVPQSANKDS-KSNSKAAIEDKPEISGSGNEGPADEI 583
+G R RN PA + S +NS AA+ ++ G P
Sbjct: 505 SKPHGFA--NRQEISSNGRNAPANKRRRVKGSSLATNSSAALYQSLDLLGQ----PTAAT 558
Query: 584 HSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALES--------DQ 635
+ ++ G TD + S P+ VH +A + D
Sbjct: 559 FAMEAEHNIG-----------------DTDPLPKQSSSPLSYVHVHAYAASAKVFNGDDS 601
Query: 636 PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRREN 695
+L+ LKP I++Y PD++FVR++E+YKA + + ++KVYFL Y++S E Q++ IRRE
Sbjct: 602 HLLEQLKPRWIIMYDPDVAFVRRVELYKAIHCNSEVKVYFLVYDNSVEEQRYLTSIRREK 661
Query: 696 GAFESLIRQKSFMMIPIDQ 714
AFE LI QK+ M IPIDQ
Sbjct: 662 EAFEKLINQKATMAIPIDQ 680
>gi|145349776|ref|XP_001419304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579535|gb|ABO97597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 975
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/468 (39%), Positives = 270/468 (57%), Gaps = 37/468 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL----------LLHSPSQGTLLLL 51
+L F + I ELL G +L+ GL +IA+++ +L P TL++
Sbjct: 20 LLPFQREITKELLA--RDGFCVLAEGLGASAVIAALVAVDDALSKTHVLGEPPMVTLIVG 77
Query: 52 SSSP---NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLT 108
+S ++K ++ AP P E TAD + R Y +G + FVT RI VDLL+
Sbjct: 78 ASEHAKVSVKERMTALFPRAAP--PLEFTADYAGDKRKKFYDAGCVAFVTTRIASVDLLS 135
Query: 109 QRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTER 168
RL + G+I+ + H E S E F+ R+ + NR+ Y+RA SD+P + GF ER
Sbjct: 136 GRLDAKRVRGIIVCSAHRTNETSGEGFVVRLFREGNRKGYVRAISDRPGDLTRGFNSVER 195
Query: 169 IMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
+K+L + ++HLWPRF + V ++L+ PP V+++R PMS+ + IQ+AI+ VMD+C+ E+
Sbjct: 196 CLKALMLTRVHLWPRFHLRVKDDLDARPPEVIELRQPMSENVLKIQEAIVSVMDSCMAEL 255
Query: 229 RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
+K+ +D DLT+E+GLFKSFD IL+RQLD +WHI ++ KQ+V DLKTLR L D L++Y
Sbjct: 256 KKSRYIDTSDLTLESGLFKSFDLILQRQLDKVWHIAPRRVKQIVYDLKTLRLLADALLKY 315
Query: 289 DAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
D+VT+LKYL LR SES S+W+F E+S+ IF+YAKKRVY R Q K + G
Sbjct: 316 DSVTFLKYLQALRASESRESMWMFTEASHAIFEYAKKRVYLLKRKAAA---AQPKGL-GA 371
Query: 349 KRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEV 408
KR L D L +LE PKW ++ E+L+EI+EER + E +
Sbjct: 372 KRPLPPQITETD-------------LIPILEPMPKWTLMEEILDEIDEERRQGG---ELL 415
Query: 409 LLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSK 456
+ E G L+ CK+E QLE CIR G+ +M W YL S+
Sbjct: 416 AVADSETVQGATLIVCKEEHVARQLEYCIRYGTPALMNAHWVDYLFSR 463
>gi|348686524|gb|EGZ26339.1| hypothetical protein PHYSODRAFT_327253 [Phytophthora sojae]
Length = 974
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 213/696 (30%), Positives = 352/696 (50%), Gaps = 68/696 (9%)
Query: 35 ASVLLLHSPSQGTLLLLSSSPNLKS--QIIHYLAPNAPLLPSEITADLPANHRHTLYSSG 92
AS + L+ + +L L+++ + +++ L + LLP + A + N R +Y G
Sbjct: 62 ASFVRLYCSPRSLVLCLNANEQAATLRRLVQALGLDRRLLPRVVDARINLNERQQMYKRG 121
Query: 93 QIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAF 152
+FFVT RIL+VDLL+ + ++GL++ + H +TE S E FI R+ + NRE +I+ F
Sbjct: 122 GVFFVTARILVVDLLSNHVDPGIISGLLVNDAHHMTETSIEAFILRLYRERNREGFIKGF 181
Query: 153 SDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGG 212
A+ SGF + E+++K L++R + L+PRF V ++ LE+ P V ++ V S M
Sbjct: 182 CGDSVALSSGFNRVEQVLKHLYVRNVFLYPRFHVAINACLEKHQPEVYEIEVAFSPSMKI 241
Query: 213 IQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQL 271
+Q+A+L ++A +KE+ R T +D DLT++ L KSF +RRQLDP+WH L KTKQL
Sbjct: 242 MQEALLVALEATVKELQRSTKSLDAADLTMDKALAKSFSSFIRRQLDPLWHKLPVKTKQL 301
Query: 272 VSDLKTLRKLLDYLVRYDAVTYLKYL---DTLRVSESFRSVWIFAESSYKIFDYAKKRVY 328
V DL TLR+LL YL RYDA++Y +L T+ + F S W+F +++ ++ AK+R+
Sbjct: 302 VGDLATLRQLLAYLPRYDAISYYSFLVNYQTMNGQQRFPSPWLFTDAADRLLTAAKERLC 361
Query: 329 RFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLR 388
+ S T K L++ N S+ + L+ VLE+ PKW L+
Sbjct: 362 QIV-----------NSTTKKPVNLRQFTAN-------SNAADSAELKLVLEQNPKWDALK 403
Query: 389 EVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
E+L+E+ +E+ ++ ++ D VLV KDE +C QL + + G++++MR
Sbjct: 404 EILDEVHDEQQRKQQKKKTNDKDKLAVGGASVLVMVKDERTCAQLREFLSLGAQEMMRRR 463
Query: 449 WEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAA 508
+ YLL K ++ K+K G+ E LL A
Sbjct: 464 FGHYLLQK-------EATLKQKGGNLSSLGL---------------------EQRLLLEA 495
Query: 509 ASKIRNQGKSDDGDNPETYYGSKG-----PGRGRGKGRNRNGPACVPQSANKDSKSNSKA 563
A+K+R + + + GSKG +G+ K R R + S + + +
Sbjct: 496 AAKLRTDELYTEEETVVSS-GSKGKQKSSAAQGKAKKRAREESSETSYSDVQVHTTEVSS 554
Query: 564 AIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRS-LKTDTAESKDSKP 622
E+ E + G L A ++ Q S L + + DS
Sbjct: 555 FGLSAAELEAITTASEKSEKDGKSKAFFDGRLRAACCRRDEQSGTSNLSLEVVDPLDSVV 614
Query: 623 VPPV-----HFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLF 677
+ H Y + L+ L P IV+Y PDM+F+R++EV+ A + + L++YF+
Sbjct: 615 LCTYEQATQHGYGASA---FLEDLMPSCIVLYDPDMAFIREVEVFHATHVA-PLEIYFMM 670
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
Y++STE Q + + I+RE AF+ LI QK+ +M+P +
Sbjct: 671 YDESTEQQSYLSEIQREKRAFDKLIHQKAHLMMPAN 706
>gi|413926647|gb|AFW66579.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 312
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 214/294 (72%), Gaps = 9/294 (3%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLL------HSPSQGTLLLLSSSP 55
+L F Q ++A+L+++PNGGLV+LSSGL L L A++LL ++ G LL+LS++
Sbjct: 1 MLAFEQQVLADLVEDPNGGLVVLSSGLPLASLAATLLLHLHQTPGNAAGGGCLLVLSATD 60
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
LK++I L L ++ DL A R TLY+SG F++PR L DLLT RL S
Sbjct: 61 TLKARIRRRLQDK--LQVHDVPPDLAAQQRATLYASGAALFLSPRALAADLLTSRLLPSR 118
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ L++L+ H T+ S++ FICR+++ N + AFSD P AMV+GF+K ER MKSL++
Sbjct: 119 VQALLLLSAHRSTDTSSDAFICRLLRQRNLLP-VYAFSDCPHAMVAGFSKAERTMKSLYV 177
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD 235
R+LHLWPRF V + +LER PP VVDVRVPM+ M GIQ A+L MDACLKE+R+TNKVD
Sbjct: 178 RRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELRRTNKVD 237
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
VEDLTV+ GLFKSFDEI+RRQLDPIWH LGKKTKQLV+DL+TLRKLLDYLVR +
Sbjct: 238 VEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRMN 291
>gi|259483093|tpe|CBF78182.1| TPA: single-stranded DNA endonuclease (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 985
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 232/744 (31%), Positives = 364/744 (48%), Gaps = 110/744 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L+F Q I EL E LVIL+ GL L +LI ++L + + L+LL + + +++ I
Sbjct: 16 LQFQQDIFTELRGEDE--LVILARGLGLLRLITNLLHFYDAAGNNLVLLVGANDRENEWI 73
Query: 63 HYLAPNAPLLPSE---------------ITADLPANHRHTLYSSGQIFFVTPRILIVDLL 107
P L + +AD R +Y+ G I VT RIL+VDLL
Sbjct: 74 GEGIPGGALCNKQNASCKGFKGHKYRQGYSADATDCSREKIYAEGGILSVTSRILVVDLL 133
Query: 108 TQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTE 167
++ L + GL++L+ + STE FI RI ++ N+ +++AFSD P +GFA
Sbjct: 134 SKLLDPERVTGLVVLHADKIVATSTEAFIIRIYRNANKSGFLKAFSDSPEPFTTGFAPLA 193
Query: 168 RIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLK 226
+++LF+RK LWPRF V V+E LE V+++ VPMS M IQ A+LE ++ C+
Sbjct: 194 NSLRNLFLRKASLWPRFHVTVAESLEGHRKAEVIELEVPMSDKMREIQNAVLECVELCIG 253
Query: 227 EMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYL 285
E++K N +D+ D T+++ L +SFD +RRQLDP+WH + +TKQ+VSDL LR +L L
Sbjct: 254 ELKKANTGLDMADWTLDSALHRSFDISIRRQLDPMWHRVSFRTKQIVSDLSDLRAILHAL 313
Query: 286 VRYDAVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVE 337
+ YDAV+++KYLDT+ + S S W+F ++++ +F AK RVY
Sbjct: 314 LTYDAVSFVKYLDTIVTAHSPPPGSTRHNYSPWLFLDAAHVLFQTAKSRVYE-------- 365
Query: 338 LNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE 397
K+ N E +S TS L VLEE PKW VL E+LEEIE +
Sbjct: 366 ---------------GKIGN---ELSRSSMTSLPTTLRPVLEEQPKWDVLAEILEEIEMD 407
Query: 398 RLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKV 457
+S GE N+ VL+ C D+ +C QL + + + KV E E
Sbjct: 408 AYHNPAS------TGESNN--TVLIMCTDQRTCCQLREYLGTMNTKVEDERQE------- 452
Query: 458 QLRSVQTSSKKKKSKEPKGYGILD---------GVAPVKIAQNAEASSVSKQEHDALLAA 508
V S+ K+ K+ G +L + V + +N A V+++
Sbjct: 453 ----VADGSEDKQEKKRSGEVMLRRKLREYVNWKRSLVNVNKNLTAKPVNEEPR------ 502
Query: 509 ASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDK 568
G D P T G P + R R R G A V A +
Sbjct: 503 ------TGSGRDSPRPTTQQGRAPPNKRR---RVRGGAASV--------------AAPRQ 539
Query: 569 PEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHF 628
P S + P++++ + +E + E+ + D E D + VH
Sbjct: 540 PNSSVQADTEPSEQMSVLLDVIQPTEVEESLKEEIIIDDLEDMGDIYELYDMDDLVMVHP 599
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
+ + D+ IL+ ++P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++
Sbjct: 600 FDGDMDEHILEEVRPRYIIMYEPDPAFIRRVEVYRSSHVGRDVRVYFMYYGGSVEEQRYL 659
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
+ +RRE AF LI++KS M + +
Sbjct: 660 SAVRREKDAFTKLIKEKSNMAVTL 683
>gi|302689481|ref|XP_003034420.1| hypothetical protein SCHCODRAFT_14860 [Schizophyllum commune H4-8]
gi|300108115|gb|EFI99517.1| hypothetical protein SCHCODRAFT_14860 [Schizophyllum commune H4-8]
Length = 989
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 214/744 (28%), Positives = 391/744 (52%), Gaps = 70/744 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ ++ ++ L++++ GL L +++ ++L L+ Q +LL++++P +S+I
Sbjct: 4 LLSFHRTVLEDIHDPTTNDLLVIARGLGLRRIVCNLLKLYDSPQNLVLLVNATPEEESEI 63
Query: 62 IHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P + + + R +Y G + VT RIL+VD+L ++PT + G+
Sbjct: 64 GEELGIMGCRKPGLRVVGYETGSKERQEMYKKGGLISVTSRILVVDMLQSQIPTELITGM 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++L+ +T E FI R+ + N+E +++AF+D+P + SG + + IMK L +RK+H
Sbjct: 124 VVLHAEKVTALVLEAFIVRLYREKNKEGFLKAFTDQPEHITSGLSPLKNIMKELQLRKVH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
L+PRFQ V + LER VV++ M++ M I AI++ M + L +++++N +D++D
Sbjct: 184 LYPRFQEGVKKALERRRADVVELSQEMTESMAEIHHAIIQCMTSTLADLKRSNTSLDLDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVEN F+SFD I+RRQLDP+WH +G +TKQLV DL TLRKLL YL+ YD + + L+
Sbjct: 244 LTVENAYFRSFDHIVRRQLDPVWHKVGPRTKQLVGDLATLRKLLGYLLTYDPIQFYMLLE 303
Query: 299 TLRVS---------ESFRSVWIFAESSYKIFDYAKKRVYRFTRS------DGVELNGQSK 343
T+ S + S W+ +++ I AK+R Y T + D ++ G +
Sbjct: 304 TIIESNQTTSSGGKKEHHSPWLLTDAANVIITVAKRRCYIMTSTRKEPVLDDMDEEGWA- 362
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVV---LEEVLEEAPKWKVLREVLEEIEEERLK 400
L +V+ + T + + + +E VLEE PKW +L +V++EIEEE ++
Sbjct: 363 -------ALDEVNGTVGQSQDTGNNRPRWLPSGVEPVLEELPKWNLLADVIQEIEEELIR 415
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQ--LEDC-------IRNGSEKVMREEWEK 451
++ + + N+ +V+ + CS + LE R S +M+ +
Sbjct: 416 METNPR--MKNTPGNNTVLVMTSSTHGCSVLTEFLESMDYSAPAGQRGTSMLLMK--LGR 471
Query: 452 YLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASK 511
YL K +L + K + E GY + + + S++++ ++A ++ A +
Sbjct: 472 YLWWKGRLHQTK---KAEGRGEQNGYYRTNTGSSTNTGPSTSTSNMNRSGNNAGVSEALQ 528
Query: 512 IRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEI 571
+++ + + + R R +G + PA P S+S + +++ D P +
Sbjct: 529 RKDKDRQE-----------RAASRRRMRG-GKTAPAPTPSR----SQSTAPSSVVDDP-V 571
Query: 572 SGSGNEGPADEIHSGVVGYSGG---MLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHF 628
+ SG+ G +L+ V+ E ++ + + + + V P
Sbjct: 572 EADLLTQLISQQSSGLEFMDDGDITLLDFDTVQFETEFDANY--ELLAPQQTVVVRP--- 626
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y+ ++D +L L+P IV+ P++ F R++E+Y+A NP + +++Y +FY +S+E KF
Sbjct: 627 YSDDADDMMLAELQPKFIVMIEPNVDFFRRVELYRAANPGLGVRLYHMFYGNSSEEHKFL 686
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
AGIR+E AFE LIR++ M++PI
Sbjct: 687 AGIRKEKNAFERLIRERGSMLLPI 710
>gi|393220394|gb|EJD05880.1| hypothetical protein FOMMEDRAFT_166191 [Fomitiporia mediterranea
MF3/22]
Length = 1074
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 227/788 (28%), Positives = 372/788 (47%), Gaps = 95/788 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP--NLKS 59
+L F +HI+ ++ + L++++ GL L KL+ ++L ++ + +LL++++ +
Sbjct: 10 LLPFQRHILEDVHDPSSSDLLLIARGLGLQKLVCTLLQIYDGPRNLVLLVNATEEEDAIG 69
Query: 60 QIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
+ + + P L + ++ R LY G + VT RILIVD+L +P + GL
Sbjct: 70 EELGIMGCRKPGL-RVVGFEMGRKERQALYKQGGLISVTSRILIVDMLQSDIPIDLITGL 128
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++L+ +T S E FI R+ + N++ +I+AFSD P SG + IMK L +RK+H
Sbjct: 129 VVLHAEKVTALSLEAFIIRLFREKNQDGFIKAFSDNPEQFTSGLYPLKAIMKELQLRKVH 188
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
++PRF V + LER VV++ +S+ M I +AI++ M A L E++++N +D++D
Sbjct: 189 IYPRFHEEVKKSLERRKADVVELHQELSESMKDIHQAIVQCMTATLAELKRSNTNLDLDD 248
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L VEN F+SFD ++RRQLDP+WH +G KTKQLVSDL TLR LL+YL+ YD + + YL+
Sbjct: 249 LNVENSYFRSFDAVVRRQLDPVWHKVGPKTKQLVSDLATLRNLLNYLLTYDPLAFHAYLE 308
Query: 299 TLRVSES---------FRSVWIFAESSYKIFDYAKKRVY--------------------- 328
T+ S S +S W+F +++ IF AK+R Y
Sbjct: 309 TIIASNSTSASGASRQHQSPWLFTDAANIIFQTAKRRCYISSKIKPKPVEQDTQFDVDLI 368
Query: 329 ----RFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKW 384
+ D VE N S + KL+ + +E +LEE PKW
Sbjct: 369 DDEEAWAALDEVEANPPS-----AQDKLRTSQGRKKSQSKKRKKWLPEGMEPILEELPKW 423
Query: 385 KVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
+L EVL+E+ EE + Q S L G VL+ C +C L + + N
Sbjct: 424 SLLAEVLQEV-EELMIQLQSSTSFLTPGTNT----VLIMCSSPRTCELLSEYLTNIDRNR 478
Query: 445 MREEW---------EKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEAS 495
+ EW YL K +L ++ +K A + A
Sbjct: 479 NKAEWGRRMMERRLRLYLWWKSKL------NESRKDSSGSSQPSGSRGADTPSSNGANKP 532
Query: 496 SVSKQEHDALLAAASK---IRNQGKSD----DGDNPETYYGSKGPGRGRGKGRNRNGPAC 548
S++ ++ + A K IR + + G P + G K G +G G + A
Sbjct: 533 SINSDPNNGISEALKKKDAIRKERSLNRRRVRGGAPSSSVGGKTQGSEQGNGSAVSSTA- 591
Query: 549 VPQSANKDSKSNSKAAI-----EDKPEISGSGN------------EGPADEIHSGVVGYS 591
Q + ++ K I E + E N + DEI+ G +
Sbjct: 592 --QESTLSTRERGKLGILAGEGEMRVEADSIANFLATQKDVLEILDDEEDEINESQSGPA 649
Query: 592 GGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPP-----VHFYALESDQPILDILKPFVI 646
G + + + + +L D + + P Y+ +SD +L+ +KP I
Sbjct: 650 DGTSQARSINVDEELALALSADFISDPNYGLLAPEQTLIFRSYSDDSDDKVLEEIKPRFI 709
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
V+Y P+ F+R+IE Y++ NP + ++VY + Y +S E KF GIRRE AF LI+++S
Sbjct: 710 VMYEPNPEFIRRIECYRSSNPGLAVRVYLMLYRNSCEEHKFLVGIRREKEAFMRLIKERS 769
Query: 707 FMMIPIDQ 714
M+I + +
Sbjct: 770 TMVIALTE 777
>gi|71018213|ref|XP_759337.1| hypothetical protein UM03190.1 [Ustilago maydis 521]
gi|46099187|gb|EAK84420.1| hypothetical protein UM03190.1 [Ustilago maydis 521]
Length = 1028
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 224/778 (28%), Positives = 376/778 (48%), Gaps = 107/778 (13%)
Query: 2 VLEFHQHIIAELL----QEPNGG--LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP 55
+L FH I+ ++ P+ G LVI++ GL L ++++++L ++ ++L++++
Sbjct: 13 LLPFHCQIVNSIVPRHDDSPDEGDALVIVARGLGLRRIVSTILRIYDSPNSLVILVNATS 72
Query: 56 NLKSQIIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
+S I L P I ++PA R +Y SG + +T RIL+VD+L +R+PT
Sbjct: 73 EEESGIGEELTTLGVRKPGLRAIHHEMPAKQRSEMYLSGGLMSITSRILVVDMLNKRIPT 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ +T S E FI RI + N+E +++AFSD P G + + ++ L
Sbjct: 133 GLITGLVVLHAEKVTPTSVEAFIARIYRQENKEGFLKAFSDYPEHFTMGISPLQTVLSQL 192
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN- 232
IR++ LWPRF S++L + V+++ P+S+ M IQ AI+E ++A L E+++ N
Sbjct: 193 RIRRVELWPRFHQQTSKDLGQRKADVIELHQPLSRSMRNIQTAIIECLEASLSELKRGNA 252
Query: 233 ----------------------KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQ 270
+V+ +D ++E+ +F++FD ++RRQLDPIWH + KTKQ
Sbjct: 253 NTGAVERCPNADNPFETIPVAQQVETDDFSIEHAIFRAFDVVVRRQLDPIWHQVSAKTKQ 312
Query: 271 LVSDLKTLRKLL-------------DYLVRYDAVTYLKYLDTLRVSESF---------RS 308
LV DL TLR LL YL+ YD+VT+ YL+T+ S + +S
Sbjct: 313 LVGDLTTLRNLLKWVLPYDISAASTSYLLTYDSVTFNSYLETILASSTTTSKGTTRQNQS 372
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSST 368
W+F +++ IF AK+RVY + S + + + L++ + + +
Sbjct: 373 SWLFMDAANIIFHEAKRRVYIWDESRPQQPRIEDSEYPDDEEALREAEGSREPFKPAHHG 432
Query: 369 STKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG---IVLVACK 425
+E VLEE PKW++L+EVL+E+E +E+ + +D G +L+ C
Sbjct: 433 PIPPEVESVLEENPKWQLLQEVLDEVE----------QEIHFNVAASDSGAGNTILIMCG 482
Query: 426 DECSCMQLEDCIRNGSE--------KVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGY 477
E + QL I + E K+M++ Y L K L + K +
Sbjct: 483 SERTSTQLRQIISSMDECPPGAPGKKLMQKLLRSYFLWKGGLGKLNAERKDGQ------- 535
Query: 478 GILDGVAPVKIAQNAEASSVSKQE--HDALLAAASKIRNQGKSDDGDNPETYYGSKGPGR 535
G + QNA S+ K ++AL A+ R Q S + S
Sbjct: 536 ----GSGESRALQNAVDGSLPKAGPINEALKRKAAYERGQQTSAMKRRRQRGGSSAQSAS 591
Query: 536 GR-GKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGM 594
GR N G A A + SK + AA +GNE D H+
Sbjct: 592 GRFNSATNAAGQASFQAEAAQVSKFIASAA---------NGNE---DGSHTLEAPLDAEQ 639
Query: 595 LETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMS 654
+ EV++ + E+ + V Y + D +L L+P +++Y PD +
Sbjct: 640 ISDEI--DEVEFDAFFGMLSMEN-----LVVVRSYRGDQDDKVLQELRPRFVIMYDPDPA 692
Query: 655 FVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
FVR++EVY++ N + ++VYF+ Y DS E Q++ + +RRE +FE LIR+KS M +P+
Sbjct: 693 FVRRVEVYRSTNQGVGVRVYFMIYSDSVEEQRYLSALRREKESFERLIREKSMMALPL 750
>gi|308806754|ref|XP_003080688.1| repair endonuclease (ISS) [Ostreococcus tauri]
gi|116059149|emb|CAL54856.1| repair endonuclease (ISS) [Ostreococcus tauri]
Length = 987
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 188/489 (38%), Positives = 282/489 (57%), Gaps = 56/489 (11%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASV------LLLHSP--SQGTL-LLLS 52
+L F + I ++L G+++++ GL +IA++ LL P +G + L++
Sbjct: 20 LLPFQRAIARDVLD--RDGVIVMAEGLGAASIIAALCAVDDALLRERPLGERGRVTLIVG 77
Query: 53 SSPNLKSQI---IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLT 108
++ +K + L P A P P E+T++ + R Y G + FVT RI VDLL+
Sbjct: 78 ATDAIKVSVKERAEALFPGARP--PLELTSETSGDARSKRYEDGCVAFVTTRIASVDLLS 135
Query: 109 QRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTER 168
RL + G+I+ N H TE S E F+ R+ + NR Y+RA SD+P + GF+ ER
Sbjct: 136 GRLEAKRVRGVIVCNAHRATEVSGEGFVVRLFREGNRSGYVRAISDRPGDLTRGFSSVER 195
Query: 169 IMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
MK+L + ++HLWPRF + V E+L+ PP V+++R P+S+ + IQ+AI+ VMD+C+ E+
Sbjct: 196 CMKALMLTRVHLWPRFHLRVKEDLDATPPEVIELRQPLSENVLMIQQAIVSVMDSCMSEL 255
Query: 229 RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
+K+ +D DLT+E+GLFKSFD IL+RQLD +W+++ K+ KQ+V DLKTLR L D L++Y
Sbjct: 256 KKSRYIDTSDLTLESGLFKSFDLILQRQLDKVWNVVPKRVKQIVYDLKTLRLLADGLLKY 315
Query: 289 DAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
D+VT+LKYL TLR SES ++W+F E+S+ IF+YAKKRVY R Q GK
Sbjct: 316 DSVTFLKYLQTLRASESREAMWLFTEASHAIFEYAKKRVYLLRRKAA----AQPPKGLGK 371
Query: 349 KRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ----ASS 404
+ V ++ L VLE PKW ++ E+L+EI+EER + A +
Sbjct: 372 RALPTPVLGSD--------------LVPVLEPMPKWTLVEEILDEIDEERRQGGELLAVA 417
Query: 405 REEVLLD---------GEEND--------HGIVLVACKDECSCMQLEDCIRNGSEKVMRE 447
E ++D E ND G L+ CK+E QLE CIR G+E +MR
Sbjct: 418 ASETVIDLTFSQPYASQEFNDVDKTLKYKQGATLIVCKEEHVVQQLEFCIRYGAEALMRA 477
Query: 448 EWEKYLLSK 456
W YL ++
Sbjct: 478 HWTDYLCNR 486
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 62/89 (69%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ YA E +L+ ++P +V+Y PD +F+R++EVY+A++P + +KVYF+ Y+ S E Q
Sbjct: 622 IFVYAHERKLNLLNRIRPSFVVMYDPDAAFIRELEVYQAQHPEVTVKVYFMVYDTSLEEQ 681
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
K+ I+RE+ AFE+LIR K M +P +Q
Sbjct: 682 KYLGSIKRESAAFENLIRTKQHMAVPAEQ 710
>gi|170285137|gb|AAI61240.1| LOC100145552 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 270/455 (59%), Gaps = 39/455 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE + +L E GLVI + GL + +++ + L L+ +L+L+++ + +
Sbjct: 4 LLEHENQVFLDLFHE--DGLVITARGLGIDRILQNFLKLYCDPGNLVLVLNTNTAEEEYL 61
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + LP IT ++ R+ +Y+ G + FVT RIL+VD LT R+P + + G++
Sbjct: 62 IDQLRSEGVTHLPRIITNEVATGERYDVYTQGGVLFVTSRILVVDFLTDRIPANLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N++ +I+AF+D P A +GF + ER+M++LF++KL+L
Sbjct: 122 VYKAHKIIESCQEAFILRLYRQKNKQGFIKAFTDNPVAFHTGFCQVERVMRNLFVKKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V+V+ L++ P VV++ V M+ M IQ +IL++M+ACLKE+++ N ++VEDL
Sbjct: 182 WPRFHVSVNSFLDKHKPEVVELHVSMTPAMLAIQSSILDIMNACLKELKRYNPALEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K+FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
++ SE +F S W+F +SS +F +A+ RVY S + +K K+ D
Sbjct: 302 MKASEKAFGQNSGWLFLDSSTSMFVHARARVYHVPDSKAI-------------KKSKQSD 348
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+NE +DG E VLE PKW+ L EVL+EIE+E ++ L G
Sbjct: 349 SNEKQDGKK---------ELVLENNPKWEALSEVLKEIEQE------NKNSEALGGP--- 390
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL + I G+E ++ + K
Sbjct: 391 -GRVLICASDDRTCAQLREYIAVGAEALLERLYNK 424
>gi|427788705|gb|JAA59804.1| Putative structure-specific endonuclease ercc1-xpf catalytic
component xpf/ercc4 [Rhipicephalus pulchellus]
Length = 860
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 222/720 (30%), Positives = 348/720 (48%), Gaps = 148/720 (20%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + +L E GLVI++ GL + +L+ S++ +H+ +L+L ++ +
Sbjct: 3 LLEFETQMFLDLHNE--DGLVIVAKGLGIERLLLSLIKVHNDPGSLVLVLGTTAEEEEFF 60
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L A N LP ITAD R +Y +G + FVT RIL+VD+L +R+P + G+I
Sbjct: 61 ISQLQADNVNPLPKSITADCGTKERTDVYLTGGVLFVTSRILVVDMLMERVPIDLITGII 120
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H E+ E FI R+ + N+ +++ SD A GF++ +R+M++LF++KL L
Sbjct: 121 VYRAHKTLESCQEAFILRLYRQKNKTGFVKGLSDSAVAFTHGFSQVQRMMRNLFVKKLFL 180
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V LE+ P VV++RV M+ M IQ AIL+++ +C++E++K N +++ED+
Sbjct: 181 WPRFQADVIASLEKRKPEVVEIRVAMTPAMNIIQMAILDIISSCVREIKKCNPSIEMEDI 240
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + +SF++I++ QLDPIWH +G KTK+LVSD+KTLR LL YL ++D VT+ + +
Sbjct: 241 TVENTIARSFEKIVKFQLDPIWHQIGPKTKRLVSDIKTLRTLLLYLTQHDCVTFYSLVKS 300
Query: 300 LRVSESFR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
+ S + S W+F +++ ++ AK RVY G K +K K D
Sbjct: 301 IHDSATAMTQVSDWLFLDAADTLYVQAKARVY-----------GTDKRPRKDDQKQKNPD 349
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
D E +PKW L E+L EI+EE + E+ D
Sbjct: 350 KKVDPSFQP-------------EHSPKWAALSEILAEIKEE-------------NKEKAD 383
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
VL+ +D+ +C QL + + G++ V+ + K
Sbjct: 384 LNTVLIVAEDDRTCGQLSEYLCCGADTVLCNLYR------------------------KA 419
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
G DGV ++ G+ DD DN G G
Sbjct: 420 VGDKDGV---------------------------QLPPLGRGDDDDN----------GEG 442
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIE--DKPEISGSGNEGPADEIHSGVVGYSGGM 594
GK R + A S + K N + +E D E G E P + G +
Sbjct: 443 HGKRRKKAKSA----SDGQKKKGNQDSEMEGSDMTETETEGMESPP--------AFPGTI 490
Query: 595 LETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMS 654
P+ F AL Q +L ++P I++Y +++
Sbjct: 491 FH-------------------------PLKSAEF-AL---QQLLHSVEPKYIILYDVNIA 521
Query: 655 FVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
VR+IE+Y+A L+VYFL YEDS + Q++ +RRE AFE LIR+KS M+IP +Q
Sbjct: 522 TVREIEMYQATRAKEVLRVYFLMYEDSIDEQRYLTSLRREKDAFEFLIREKSIMVIPDEQ 581
>gi|427799027|gb|JAA64965.1| Putative structure-specific endonuclease ercc1-xpf catalytic
component xpf/ercc4, partial [Rhipicephalus pulchellus]
Length = 860
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 222/720 (30%), Positives = 348/720 (48%), Gaps = 148/720 (20%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + +L E GLVI++ GL + +L+ S++ +H+ +L+L ++ +
Sbjct: 29 LLEFETQMFLDLHNE--DGLVIVAKGLGIERLLLSLIKVHNDPGSLVLVLGTTAEEEEFF 86
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L A N LP ITAD R +Y +G + FVT RIL+VD+L +R+P + G+I
Sbjct: 87 ISQLQADNVNPLPKSITADCGTKERTDVYLTGGVLFVTSRILVVDMLMERVPIDLITGII 146
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H E+ E FI R+ + N+ +++ SD A GF++ +R+M++LF++KL L
Sbjct: 147 VYRAHKTLESCQEAFILRLYRQKNKTGFVKGLSDSAVAFTHGFSQVQRMMRNLFVKKLFL 206
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V LE+ P VV++RV M+ M IQ AIL+++ +C++E++K N +++ED+
Sbjct: 207 WPRFQADVIASLEKRKPEVVEIRVAMTPAMNIIQMAILDIISSCVREIKKCNPSIEMEDI 266
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + +SF++I++ QLDPIWH +G KTK+LVSD+KTLR LL YL ++D VT+ + +
Sbjct: 267 TVENTIARSFEKIVKFQLDPIWHQIGPKTKRLVSDIKTLRTLLLYLTQHDCVTFYSLVKS 326
Query: 300 LRVSESFR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
+ S + S W+F +++ ++ AK RVY G K +K K D
Sbjct: 327 IHDSATAMTQVSDWLFLDAADTLYVQAKARVY-----------GTDKRPRKDDQKQKNPD 375
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
D E +PKW L E+L EI+EE + E+ D
Sbjct: 376 KKVDPSFQP-------------EHSPKWAALSEILAEIKEE-------------NKEKAD 409
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
VL+ +D+ +C QL + + G++ V+ + K
Sbjct: 410 LNTVLIVAEDDRTCGQLSEYLCCGADTVLCNLYR------------------------KA 445
Query: 477 YGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRG 536
G DGV ++ G+ DD DN G G
Sbjct: 446 VGDKDGV---------------------------QLPPLGRGDDDDN----------GEG 468
Query: 537 RGKGRNRNGPACVPQSANKDSKSNSKAAIE--DKPEISGSGNEGPADEIHSGVVGYSGGM 594
GK R + A S + K N + +E D E G E P + G +
Sbjct: 469 HGKRRKKAKSA----SDGQKKKGNQDSEMEGSDMTETETEGMESPP--------AFPGTI 516
Query: 595 LETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMS 654
P+ F AL Q +L ++P I++Y +++
Sbjct: 517 FH-------------------------PLKSAEF-AL---QQLLHSVEPKYIILYDVNIA 547
Query: 655 FVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
VR+IE+Y+A L+VYFL YEDS + Q++ +RRE AFE LIR+KS M+IP +Q
Sbjct: 548 TVREIEMYQATRAKEVLRVYFLMYEDSIDEQRYLTSLRREKDAFEFLIREKSIMVIPDEQ 607
>gi|345842368|ref|NP_001230961.1| DNA repair endonuclease XPF [Cricetulus griseus]
gi|229463017|sp|Q9QYM7.3|XPF_CRIGR RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA
excision repair protein ERCC-4
gi|6683476|dbj|BAA89229.1| ERCC4 [Cricetulus griseus]
gi|169302624|gb|ACA53031.1| XPF [Cricetulus griseus]
Length = 913
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/459 (38%), Positives = 265/459 (57%), Gaps = 43/459 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--SDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGIIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLSIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E S W+F ++S +F A+ RVYR V+LN KK
Sbjct: 313 LRATEKVFGQNSGWLFLDASTSMFVNARARVYRVP---DVKLN-------------KKAK 356
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+E +G + E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 357 MSESAEGQETKK------ELVLESNPKWEALSEVLKEIE------AENKESEALGGP--- 401
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 402 -GQVLICASDDRTCCQLRDYLTAGAEAFLLRLYRKTFEK 439
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 609 SLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKA 664
+L +D+A +P+ +H SD +L ++P +V+Y +++FVRQ+E+Y+A
Sbjct: 534 NLSSDSAYGILKEPLTIIHPLVGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRA 593
Query: 665 ENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 594 SRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 640
>gi|407925047|gb|EKG18069.1| hypothetical protein MPH_04759 [Macrophomina phaseolina MS6]
Length = 935
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 219/740 (29%), Positives = 369/740 (49%), Gaps = 114/740 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q I +L E LVIL+ GL L +++ ++L + + L+LL + + ++ I
Sbjct: 16 LQYQQEIFHDLRDEDQ--LVILARGLGLLRIVTNLLHAYDAAGNNLVLLVGADDRENGWI 73
Query: 63 ------HYL---APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
H AP A L T + R +YS G IF +T RILIVDLL+ L
Sbjct: 74 GESLAEHAAISKAPKARGLSLVNTDMMSVGAREKMYSRGGIFSITSRILIVDLLSGLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ ++G ++L+ + S E FI RI + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ATVSGCVVLHADKVVATSLEAFILRIYRQKNKAGFLKAFSDNPEPFATGFSPLATMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK L+PRF V+V++ LE R V+++ VPM++ M IQ+A++E ++ + E+RK+N
Sbjct: 194 FLRKPSLYPRFHVSVAQSLEGRRKAEVIELEVPMTESMAAIQQAVMECVEVSIAELRKSN 253
Query: 233 K--VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
+D+ED T+++ L +SFD +RRQLDP+WH +T+Q+V DL LR +L L+ YDA
Sbjct: 254 SGSLDMEDWTLDSALQRSFDTQIRRQLDPVWHRTSFRTRQIVRDLSLLRHILHALLAYDA 313
Query: 291 VTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V + KYLDT+ + + +S W+F ++++ +F+ AK+RVY
Sbjct: 314 VDFNKYLDTVLAASAPPPGSTRMNQSPWLFLDAAHTLFETAKRRVY-------------- 359
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKV--VLEEVLEEAPKWKVLREVLEEIEEERLK 400
+GK D T+++S +V L VLEE PKW++L EVLEEIE +
Sbjct: 360 ---SGKL-----------NDTSTANSSHEVPDSLRPVLEELPKWRMLAEVLEEIERDYYF 405
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLR 460
+ +++ G VL+ C D +C QL + ++ + +V EE EK
Sbjct: 406 NPTP--------QDDSSGAVLIMCGDNSTCRQLREYLQ--TMRVRPEEQEK--------- 446
Query: 461 SVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD 520
K + + P ++ I + S VS +L A +K+ N
Sbjct: 447 ------KDEPEEGPSAAFMMRRKLRNYINWKRDFSKVSA----SLFAENNKVINN----- 491
Query: 521 GDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPA 580
+T G GPGR NK + AA P S + G
Sbjct: 492 ----DTRTGQAGPGRA---------------PPNKRRRVRGGAAAGAGP--SRTVTSGDM 530
Query: 581 DEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALES 633
+ + + E +E Q K + D ++ + K + +H Y +
Sbjct: 531 QQSFNRDAHMQNLLAELQPTGEETQQKGEIAADPLDNMEDYYELYEMKDLLVIHPYDGDM 590
Query: 634 DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRR 693
D+ +L+ ++P +++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RR
Sbjct: 591 DEHVLEEVRPRYVIMYEPDAAFIRRVEVYRSSHTDRNVRVYFMYYGGSVEEQRYLSSVRR 650
Query: 694 ENGAFESLIRQKSFMMIPID 713
E +F LIR++S M + +D
Sbjct: 651 EKDSFSKLIRERSNMAVVLD 670
>gi|432921487|ref|XP_004080174.1| PREDICTED: DNA repair endonuclease XPF-like [Oryzias latipes]
Length = 889
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 270/455 (59%), Gaps = 38/455 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I L + GL++++ G+ L +++ + ++S +LLL+++ +
Sbjct: 5 LLEYETEIFLSLFS--SDGLLVVAEGMGLDRILLQFMRVYSEKDSLVLLLNTTTPEQEYF 62
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L LP +T+D+ ++ R+++Y+ G + FVT RIL+VD L R+P ++G++
Sbjct: 63 TEQLRVEGVTHLPRTVTSDVQSSERYSVYTEGGVLFVTSRILVVDFLLDRIPAHLISGIL 122
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+DK TA +GF + ER+M++LF++KL+L
Sbjct: 123 VYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSTGFCQVERVMRNLFVKKLYL 182
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V+ LER P VV++ V ++ M +Q +IL++M ACLKE+++ N ++ EDL
Sbjct: 183 WPRFQASVNTVLERHKPEVVELHVSLTPAMRAVQSSILDIMGACLKELKRYNPTLEAEDL 242
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L +F++ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 243 SLENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLLES 302
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR S+ S W+F +SS +F A+ RVYR GK KK+
Sbjct: 303 LRSSQKIFGSNSGWLFLDSSTSMFVNARSRVYRIPE--------------GK----KKLR 344
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+E SS++ ++ E VLE++PKW+ L EVLEEIE K+ S EE
Sbjct: 345 VGEEEQRQKSSSAPEMKRELVLEKSPKWEALTEVLEEIE----KENKSCEEA-------- 392
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL+ IR+GS+ ++ + +
Sbjct: 393 -GGVLICASDDRTCAQLQQYIRHGSDGLLHRLYAR 426
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 552 SANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLK 611
+ N+ S + + K E+ GSG+E L E+E Q K L
Sbjct: 466 TKNQSRPSLTLTQMMGKEEVGGSGDED---------------CLMEEEEEEEEQMKLDLS 510
Query: 612 TDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENP 667
+D +P+ +H +D +L ++P +V+Y ++SFVRQ+EVYKA P
Sbjct: 511 SDAYYGILKEPLTVIHPLKGCTDPHSLTRVLHEVEPSFVVLYDAELSFVRQLEVYKAMRP 570
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
L+VYFL Y STE QK+ + +E AFE LIR+K+ M++P
Sbjct: 571 GKPLRVYFLIYGGSTEEQKYLTALSKEKKAFEHLIREKATMVVP 614
>gi|317150241|ref|XP_001823894.2| DNA repair protein RAD1 [Aspergillus oryzae RIB40]
Length = 955
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 223/732 (30%), Positives = 363/732 (49%), Gaps = 93/732 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q I EL E LVIL+ GL L +L+ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDIFTELRTEDE--LVILARGLGLLRLVTNLLHFYDAAGNNLVLVVGADDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY P L T + R +Y+ G I VT RIL+VDLL++ L
Sbjct: 74 GEALAEHYAMSKTPFARGLKVINTERASVSMRERIYAEGGILSVTSRILVVDLLSKLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + STE FI RI + +N+ +++AFSD P +GFA M++L
Sbjct: 134 EKITGMVVLHADKIMATSTEAFIIRIFRQINKNGFLKAFSDSPEPFTTGFAPLANSMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V+E LE V+++ VPMS M +Q A+LE ++ C+ E++K N
Sbjct: 194 FLRKASLWPRFHVTVAESLEGHRKAEVIELEVPMSDKMREMQNAVLECVEICIGELKKAN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D+ D T+++ L +SFD ++RRQLDPIWH + +T+Q+VSDL LR +L L+ YD+V
Sbjct: 254 TGLDMADWTLDSALHRSFDIMIRRQLDPIWHRVTFRTRQIVSDLSDLRAILHALLTYDSV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+++KYLDT+ + S S W+F ++++ +F AK R Y+ S+ V
Sbjct: 314 SFVKYLDTIVTAHSPPPGSTRHNYSPWLFLDAAHVLFQTAKSRAYQGKISNDV------- 366
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+S S L+ VLEE PKW+VL EVLEEIE +
Sbjct: 367 -------------------ARSSLNSFPTTLQPVLEEQPKWEVLAEVLEEIENDAYLNPV 407
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMRE-EWEKYLLSKVQLRSV 462
+ +E + +L+ C D+ +C QL + + V E E +K + ++ S
Sbjct: 408 NVDE--------SNSTILIMCTDQRTCRQLREYLGTMHAHVNDENEDDKDIGDNIKKGSA 459
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGD 522
Q +++ + L N + SK +D A GKS D
Sbjct: 460 QVMMRRRLREYLNWKTSL---------SNVTKNLTSKPTNDESQA--------GKSQDSP 502
Query: 523 NPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADE 582
P G P + R R R G A V ++ + S+ + +E ++S E E
Sbjct: 503 RPSAPQGRAPPNKRR---RVRGGGA-VTSASGRVPNSSVQTDVELPGQVSNLLEEIQPTE 558
Query: 583 IHSGVVGYSGGMLETAFVEKEVQWKRSLKT--DTAESKDSKPVPPVHFYALESDQPILDI 640
I V+KE L+ D E D + +H Y + D+ IL+
Sbjct: 559 IEE--------------VQKEDIIIDDLEDMEDFYELYDMDDLIMIHPYDGDMDEHILEE 604
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
++P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RRE +F
Sbjct: 605 VRPRYIIMYEPDSAFIRRVEVYRSSHVGRNVRVYFMYYGGSVEEQRYLSAVRREKDSFTK 664
Query: 701 LIRQKSFMMIPI 712
LI++K M + +
Sbjct: 665 LIKEKGNMAVTL 676
>gi|328863440|gb|EGG12539.1| DNA repair protein rad16 [Melampsora larici-populina 98AG31]
Length = 954
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 218/742 (29%), Positives = 361/742 (48%), Gaps = 106/742 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLL-----LSSSPN 56
+L F + ++++L QE L++L+ GL +I + L ++ S ++ L
Sbjct: 6 LLPFQESVLSDLKQE--DALIVLARGLGARSIIGNFLKTYTKSNPKPVIVVNATLEEESG 63
Query: 57 LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNL 116
LK + L I ++ + R +Y G + +T RILIVDLL +++ +
Sbjct: 64 LKDDLGMQLV--------SIGHEMGSKERERVYQRGGVLSITSRILIVDLLCRKIDIERI 115
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIR 176
+GL+IL+ +T S E FI R+ + N +++AFS++P G + + ++ L +R
Sbjct: 116 SGLVILHAELVTPTSIEAFIVRVFRRSNTTGFLKAFSEEPEHFTFGLSPLQTVLTQLRLR 175
Query: 177 KLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVD 235
+ +WPRF +V ++LE P V+++ +S M IQ +I+E MDA L ++R+ N ++
Sbjct: 176 TVMIWPRFHASVRKDLEARKPKVIELHQALSPAMNDIQTSIIECMDASLNQIRRANTNLE 235
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
V+DLTV+N LF+SFD I+R QLDPIWH + +T+QLV DL TLRKLL YL+ +D VT+ +
Sbjct: 236 VDDLTVDNALFRSFDMIIRAQLDPIWHRVSPQTRQLVGDLTTLRKLLGYLLSFDCVTFYQ 295
Query: 296 YLDTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT 346
+L+T+ + S +S W+F ++ IF AK+R+Y + +E +SK+ T
Sbjct: 296 FLETILAANSSTTTGVTAQNQSPWLFTSAADTIFSVAKRRLY-----ENIE---KSKNST 347
Query: 347 GKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSRE 406
+ + D N G + VLEE PKW +L EVL+EIE S+
Sbjct: 348 NE----AQWDWNWLPKGT----------QPVLEEQPKWLLLGEVLKEIEVSLESDELSKT 393
Query: 407 EVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV---------MREEWEKYLLSKV 457
E L G+ +VL+ C C L + + E++ MR + Y L K
Sbjct: 394 ENLNSGK-----VVLIMCSSSSICAMLNEYLTTQDEELDEVYKLKPMMRRRLKHYFLWKG 448
Query: 458 QLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGK 517
L + + +K G L+ + ++ + A + + D L+ A K
Sbjct: 449 SLGKMTRNLNQKS-------GNLNPIRSIQPSNFASKTGSTTGSSDQNLSEALK------ 495
Query: 518 SDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNS---KAAIEDKPEI--- 571
K R G G N+ + +K +S K A + + +
Sbjct: 496 ------------RKADYRNSGAGLNKRRRVRGGGAGTGSTKMDSVLIKVAFKHEKRLDSM 543
Query: 572 -SGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYA 630
S SG + D+ S + VE + S D + D + + Y
Sbjct: 544 TSASGLKPIEDDTTS----------QALIVEDFNEDDFSAYFDLLSTDD---MVIIRTYL 590
Query: 631 LESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAG 690
+ D +L+ L P IV+Y PD++FVR++E Y+A NP + +K YF+ Y DS E Q++ +
Sbjct: 591 GDEDDRVLEELHPRYIVMYEPDVAFVRRVECYRASNPGLNVKTYFMMYSDSVEEQRYLSS 650
Query: 691 IRRENGAFESLIRQKSFMMIPI 712
+RRE AFE LIR+ + M++P+
Sbjct: 651 VRREKEAFERLIRENATMVVPL 672
>gi|225678147|gb|EEH16431.1| DNA repair protein RAD1 [Paracoccidioides brasiliensis Pb03]
Length = 964
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 221/733 (30%), Positives = 367/733 (50%), Gaps = 94/733 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + +EL E LVIL+ GL L +++ ++L + + L+++ + +++ I
Sbjct: 14 LQYQQDLFSELRSEDE--LVILARGLGLLRIVTNLLHSYDATGNNLVIVVGADRRENEWI 71
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY PL L T R T+Y+ G I VT RIL+VDLL++ L
Sbjct: 72 GEALAEHYAVSRTPLARGLKVINTDQATVPMRQTMYTQGGILSVTSRILVVDLLSKLLDP 131
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ GLI+L+ + S E FI RI + N+ +++AFSD P GF +M++L
Sbjct: 132 ESITGLIVLHAEKIVATSQEAFIIRIYRQFNKVGFLKAFSDSPEPFTIGFNPLANMMRNL 191
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRFQV V+E LE R+ V+++ VPM+ M IQ A+LE ++A ++E++K N
Sbjct: 192 FLRKTSLWPRFQVTVAESLEGRKKAEVIELEVPMTDKMRDIQNAVLECVEANIRELKKAN 251
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D+ED TV++ L ++FD +RRQLDP+WH + +TKQ+ SDL LR +L L+ YD+V
Sbjct: 252 SGLDIEDWTVDSALHQNFDVAIRRQLDPVWHRVSFRTKQIASDLTVLRSMLLSLLTYDSV 311
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ KYLD + + S S W+F ++++ IF AK RVYR
Sbjct: 312 SFNKYLDVIIAAHSPPPGSNKQNFSPWLFLDAAHVIFKTAKSRVYR-------------- 357
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
GK +++ + ++S LE VLEE PKW VL +VL+EIE S
Sbjct: 358 ---GKNDPCEQLSD---------TSSLPPSLEPVLEEQPKWSVLADVLDEIER------S 399
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
+ + G+ N G +L+ C D +C Q+ E+ + + KV+
Sbjct: 400 TYLNPVPPGDSN--GTILIMCSDGKTCRQI-------------REYLETMRIKVKSSKDA 444
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
T ++ + P G +L + ++ V+ +K R + + G N
Sbjct: 445 TETEIESDDSPSGEFMLRRNLIHYLNWKRNSTRVNSN------LFTTKSRQEPGTVAGYN 498
Query: 524 ----PETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGP 579
Y+G P + R R R G + + + + + S+ + E ++S E
Sbjct: 499 SLSSSTNYHGRVPPNKRR---RLRGGASGL--TPARGASSSVQPDTEVPTQVSTLLEEIQ 553
Query: 580 ADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILD 639
+E G + ET V ++ S D D K + + Y + D +L+
Sbjct: 554 LEEPEDGAI-------ETELVVDDL----SDMEDYYGLYDMKDLLMICPYDGDMDDHVLE 602
Query: 640 ILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFE 699
KP I++Y PD +F+R++EVY++ + + +++V+FL+Y S E Q++ + +RRE AF
Sbjct: 603 EAKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVFFLYYSGSVEEQRYLSAVRREKDAFT 662
Query: 700 SLIRQKSFMMIPI 712
LI++K M + I
Sbjct: 663 KLIKEKGSMALTI 675
>gi|226374628|gb|ACO52466.1| DNA repair endonuclease XPF [Dicentrarchus labrax]
Length = 899
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 275/481 (57%), Gaps = 39/481 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + L + GL++ + G+ + +++ + ++S +LLL+++ +
Sbjct: 5 LLEFETEMFLSLFS--SDGLLVAAEGMGIDRILLQFMRVYSEQDSLVLLLNTTTPEQEYF 62
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L LP +T+D+ + R+ +Y++G + FVT RIL+VD LT R+P ++G++
Sbjct: 63 TEQLRIEGVTHLPRTVTSDVQSTERYNVYTAGGVLFVTSRILVVDFLTDRIPADLISGIL 122
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+DK TA SGF + ER+M++LF++KL+L
Sbjct: 123 VYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKLYL 182
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V+ L+R P VV++ V ++ M IQ +IL++M ACLKE+++ N ++ EDL
Sbjct: 183 WPRFQASVNTALDRHKPEVVELNVSLTPAMRAIQSSILDIMGACLKELKRYNPTLEAEDL 242
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L +FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+ L++
Sbjct: 243 SLENTLGSAFDKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFFNLLES 302
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR S+ S W+F +SS +F A+ RVY S K+KLK
Sbjct: 303 LRSSQKIFGSNSGWLFLDSSTSMFVNARGRVYHIPES---------------KKKLKV-- 345
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ + SS + +V + VLE++PKW+ L EVL+EIE+E +++
Sbjct: 346 -GAEAEKPKSSPALEVKRQLVLEKSPKWEALTEVLQEIEKEN------------KSSQHE 392
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL--LSKVQLRSVQTSSKKKKSKEP 474
G VL+ D+ +C QL+ IR+GS+ ++ + + + L + + S KK P
Sbjct: 393 PGPVLICASDDRTCAQLQQYIRHGSDWLLNRLYARTIGKLDSAAAAAFELDSHKKAKGWP 452
Query: 475 K 475
K
Sbjct: 453 K 453
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y ++SFVRQ+E+YKA P L+VYFL Y STE QK+ + +E
Sbjct: 548 VLHEVEPSFVVLYDAELSFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQKYLTALSKEKK 607
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M+IP
Sbjct: 608 AFEHLIREKATMVIP 622
>gi|322701377|gb|EFY93127.1| MUS38-like protein [Metarhizium acridum CQMa 102]
Length = 1227
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 211/756 (27%), Positives = 359/756 (47%), Gaps = 148/756 (19%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN---- 56
+VLE+ QH+ EL E LV+L+ GL L +L+ ++L + + L+++ +
Sbjct: 299 VVLEYQQHLFQELRAEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIVIVGAEERENG 356
Query: 57 -----LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
L AP A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 357 WIGEALAEHAAISAAPKARGLTVVNTDFQSVGAREKMYAGGGIFSITSRILVVDLLTGLL 416
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
++ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M+
Sbjct: 417 DPESITGLVVLHADRVVATSLEAFILRVYRQKNKIGFLKAFSDNPDPFSTGFSPLSTMMR 476
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+++ LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K
Sbjct: 477 NLFLKRASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMTDIQNAIMECVEVSIHELKK 536
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
N ++++D +++ L K+FD ++RRQLDP WH + KT+Q+V+DL LR LL ++ YD
Sbjct: 537 GNSGLEMDDWNLDSALLKNFDVMVRRQLDPNWHRVSWKTRQIVNDLTVLRGLLTSVLAYD 596
Query: 290 AVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
AV++L++LDT+ + S +S W+F +++ IFD A++RVY
Sbjct: 597 AVSFLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQTIFDTARRRVY------------- 643
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
+ + + + +N D L VLEE PKW +L EVLEEI+ + +
Sbjct: 644 ----SASAKTVSQSGDNIDS------------LRPVLEELPKWALLAEVLEEIDRDLYFE 687
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI-------RNGSEKVMREEWE---- 450
+R++ +G +L+ C + +C QL D + R + +E+ E
Sbjct: 688 PPARDD--------SNGTILIMCSNTDTCRQLRDYLQTMHVKPRVATPTTTKEDEEDAHK 739
Query: 451 --KYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAA 508
+ + +LRS T + Q A+ S+ E+ L
Sbjct: 740 PSAAFMMRRRLRSYLTWKR----------------------QFAQVSATLFSENQKALNG 777
Query: 509 ASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDK 568
A+ R G G GRG+ R
Sbjct: 778 AADSRP--------------GHAGMGRGKPPSNKRR------------------------ 799
Query: 569 PEISGSGNEG-PADEIHSGVVG--------YSGGMLETAFVEKEVQWKRSLKTDTAESKD 619
+ G GN G A +GV+ + M E E+E Q K + D + +
Sbjct: 800 -RVRGGGNAGVSAGRTDTGVIAQYFEKPGEVAHLMAEVQITEEEAQQKDDIIADPLDDME 858
Query: 620 S-------KPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK 672
+ + VH Y + D+ +L+ +KP I++Y PD SF+R++EVY++ + ++
Sbjct: 859 DYYQLYEMQDLVVVHAYDGDQDEHVLEEVKPRYIIMYEPDASFIRRVEVYRSSHNDRNVR 918
Query: 673 VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
VYF++Y S E Q++ + +RRE +F LI++++ M
Sbjct: 919 VYFMYYGGSVEEQRYLSSVRREKDSFTKLIKERASM 954
>gi|417405247|gb|JAA49341.1| Putative structure-specific endonuclease ercc1-xpf catalytic
component xpf/ercc4 [Desmodus rotundus]
Length = 916
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 269/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL+ GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLEA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPHRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVKKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M +Q AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAMQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K+FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 253 SLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVYR + + K + KV+
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSLFINARARVYRVPDA----------KMRKKGKMSGKVE 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE PKW+ L EVL+EIE A + E L G
Sbjct: 363 IKEEQETKK---------ELVLESNPKWEALTEVLKEIE------AENAESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL++C+ G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLKECVTVGAEAFLLRLYRKTFEK 442
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 575 GNEGPADEIHSGVVGYS---GGMLETAFVE-KEVQWKRSLKTDTAESKDSKPVPPVHF-- 628
GN +E G GY G E+ E K +++ +L +D A P+ +H
Sbjct: 499 GNSEELEEEGDGKEGYPRDLGSSPESCLEEMKPEEFELNLSSDAAYGILKDPLTIIHPLL 558
Query: 629 -----YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTE 683
YAL +L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE
Sbjct: 559 GCRDPYALTR---VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTE 615
Query: 684 VQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q++ +R+E AFE LIR+K+ M++P
Sbjct: 616 EQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|238499435|ref|XP_002380952.1| DNA repair protein RAD1, putative [Aspergillus flavus NRRL3357]
gi|220692705|gb|EED49051.1| DNA repair protein RAD1, putative [Aspergillus flavus NRRL3357]
Length = 978
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 223/732 (30%), Positives = 363/732 (49%), Gaps = 93/732 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q I EL E LVIL+ GL L +L+ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDIFTELRTEDE--LVILARGLGLLRLVTNLLHFYDAAGNNLVLVVGADDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY P L T + R +Y+ G I VT RIL+VDLL++ L
Sbjct: 74 GEALAEHYAMSKTPFARGLKVINTERASVSMRERIYAEGGILSVTSRILVVDLLSKLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + STE FI RI + +N+ +++AFSD P +GFA M++L
Sbjct: 134 EKITGMVVLHADKIMATSTEAFIIRIFRQINKNGFLKAFSDSPEPFTTGFAPLANSMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V+E LE V+++ VPMS M +Q A+LE ++ C+ E++K N
Sbjct: 194 FLRKASLWPRFHVTVAESLEGHRKAEVIELEVPMSDKMREMQNAVLECVEICIGELKKAN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D+ D T+++ L +SFD ++RRQLDPIWH + +T+Q+VSDL LR +L L+ YD+V
Sbjct: 254 TGLDMADWTLDSALHRSFDIMIRRQLDPIWHRVTFRTRQIVSDLSDLRAILHALLTYDSV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+++KYLDT+ + S S W+F ++++ +F AK R Y+ S+ V
Sbjct: 314 SFVKYLDTIVTAHSPPPGSTRHNYSPWLFLDAAHVLFQTAKSRAYQGKISNDV------- 366
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+S S L+ VLEE PKW+VL EVLEEIE +
Sbjct: 367 -------------------ARSSLNSFPTTLQPVLEEQPKWEVLAEVLEEIENDAYLNPV 407
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMRE-EWEKYLLSKVQLRSV 462
+ +E + +L+ C D+ +C QL + + V E E +K + ++ S
Sbjct: 408 NVDE--------SNSTILIMCTDQRTCRQLREYLGTMHAHVNDENEDDKDIGDNIKKGSA 459
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGD 522
Q +++ + L N + SK +D A GKS D
Sbjct: 460 QVMMRRRLREYLNWKTSL---------SNVTKNLTSKPTNDESQA--------GKSQDSP 502
Query: 523 NPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADE 582
P G P + R R R G A V ++ + S+ + +E ++S E E
Sbjct: 503 RPSAPQGRAPPNKRR---RVRGGGA-VTSASGRVPNSSVQTDVELPGQVSNLLEEIQPTE 558
Query: 583 IHSGVVGYSGGMLETAFVEKEVQWKRSLKT--DTAESKDSKPVPPVHFYALESDQPILDI 640
I V+KE L+ D E D + +H Y + D+ IL+
Sbjct: 559 IEE--------------VQKEDIIIDDLEDMEDFYELYDMDDLIMIHPYDGDMDEHILEE 604
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
++P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RRE +F
Sbjct: 605 VRPRYIIMYEPDSAFIRRVEVYRSSHVGRNVRVYFMYYGGSVEEQRYLSAVRREKDSFTK 664
Query: 701 LIRQKSFMMIPI 712
LI++K M + +
Sbjct: 665 LIKEKGNMAVTL 676
>gi|158260475|dbj|BAF82415.1| unnamed protein product [Homo sapiens]
Length = 916
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 267/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K++ +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKEKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E E+ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGEETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDQTCSQLRDYITLGAEAFLLRLYRKTFEK 442
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|410895825|ref|XP_003961400.1| PREDICTED: DNA repair endonuclease XPF-like [Takifugu rubripes]
Length = 896
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 269/467 (57%), Gaps = 48/467 (10%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLL--SSSPNLKS 59
+LEF + L + GLV+++ G+ + +++ + ++S QG+L+LL +++P +
Sbjct: 5 LLEFETEMFLSLFG--SDGLVVVAEGMGIDRILLQFMRVYS-EQGSLVLLLNTTTPEQEY 61
Query: 60 QIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
LP +T+D+ R+ +Y+ G + FVT RIL+VD LT R+P + G+
Sbjct: 62 FTEQLRMEGVTHLPRTVTSDIQNTERYNVYTEGGVLFVTSRILVVDFLTDRIPAQLITGI 121
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++ H + E+ E FI R+ + N+ +I+AF+DK TA SGF + ER+M++LF++KL+
Sbjct: 122 LVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKLY 181
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
LWPRFQ +V+ L+R P VV++ V ++ M IQ AILE+M ACLKE+++ N ++ ED
Sbjct: 182 LWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSAILEIMSACLKELKRFNPTLEAED 241
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
++E+ L SFD+ +R LDP+WH LG KTK LV DLK LR L YL +YD VT+L L+
Sbjct: 242 FSLESTLGNSFDKTIRHYLDPLWHQLGAKTKALVHDLKVLRVLSLYLTQYDCVTFLNLLE 301
Query: 299 TLRVSE---SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
+LR S+ S W+F +SS +F A+ RVY S K+K+K
Sbjct: 302 SLRSSQKNFGSNSGWLFLDSSNSMFVNARARVYHIPDS---------------KKKMKVG 346
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
E + SS+ +V E VLE +PKW+ L EVL+EIE E ++
Sbjct: 347 AETEKQK---SSSVAEVKRELVLERSPKWEALTEVLQEIEREN------------RSSQH 391
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV 462
+ G VL+ D+ +C QL+ I++GS+ +LL+++ R+V
Sbjct: 392 EQGHVLICASDDRTCAQLQQYIKHGSD---------WLLNRLYARTV 429
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y ++SFVRQ+E+YKA P L+VYFL Y STE QK+ + +E
Sbjct: 547 VLHEVEPSFVVLYDAELSFVRQLEIYKACRPGKPLRVYFLIYGGSTEEQKYLTALSKEKK 606
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M+IP
Sbjct: 607 AFEHLIREKATMVIP 621
>gi|4885217|ref|NP_005227.1| DNA repair endonuclease XPF [Homo sapiens]
gi|229463004|sp|Q92889.3|XPF_HUMAN RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA
excision repair protein ERCC-4; AltName: Full=DNA repair
protein complementing XP-F cells; AltName:
Full=Xeroderma pigmentosum group F-complementing protein
gi|19550957|gb|AAL91593.1|AF491814_1 excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Homo sapiens]
gi|1905924|gb|AAB50174.1| DNA repair protein [Homo sapiens]
gi|119605523|gb|EAW85117.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4, isoform CRA_a [Homo sapiens]
gi|182887847|gb|AAI60102.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 4 [synthetic construct]
Length = 916
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 267/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K++ +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKEKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E E+ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGEETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 442
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|74143484|dbj|BAE28815.1| unnamed protein product [Mus musculus]
Length = 486
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 266/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGTDRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E S W+F ++S +F A+ RVYR V+LN ++K T +K +V
Sbjct: 313 LRATEKVFGQNSGWLFLDASTSMFVNARARVYRVP---DVKLNKKAK--TSEKTSSPEVQ 367
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ E VLE PKW+ L +VL+EIE A ++E L G
Sbjct: 368 ETKK--------------ELVLESNPKWEALTDVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 405 -GRVLICASDDRTCCQLRDYLSAGAETFLLRLYRKTFEK 442
>gi|119605524|gb|EAW85118.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4, isoform CRA_b [Homo sapiens]
Length = 897
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 267/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K++ +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKEKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E E+ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGEETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 442
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 631 LESDQPILDILKPFVIVVYHPDM------SFVRQIEV--YKAENPSIKLKVYFLFYEDST 682
L SD + +P I+ HP + + R +++ ++ ++ + +VYFL Y ST
Sbjct: 538 LSSDAAFGILKEPLTII--HPLLGCSDPYALTRGLKMLFFQPKSSVLTCRVYFLIYGGST 595
Query: 683 EVQKFKAGIRRENGAFESLIRQKSFMMIP 711
E Q++ +R+E AFE LIR+K+ M++P
Sbjct: 596 EEQRYLTALRKEKEAFEKLIREKASMVVP 624
>gi|1524411|gb|AAB07689.1| DNA repair endonuclease subunit [Homo sapiens]
Length = 905
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 267/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 4 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 61
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 62 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 122 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 182 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K++ +K++
Sbjct: 302 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKEKISEKME 351
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E E+ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 352 IKEGEETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 393
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 394 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 431
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 519 KHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 578
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 579 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 632
>gi|441659521|ref|XP_004091351.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF
[Nomascus leucogenys]
Length = 1168
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 263/459 (57%), Gaps = 34/459 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 261 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 318
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 319 INQLKIEGVEHLPRRVTNEITNNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 378
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 379 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 438
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 439 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 498
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 499 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 558
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + KK K+ +
Sbjct: 559 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHL-----------PDAXMSKKEKIS--E 605
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ K E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 606 KMEIKERARYLVGLKTKKELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 656
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 657 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 694
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 782 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 841
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q E+Y+A P +VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 842 QXEIYRASRPGKPCRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 895
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LP +T ++ N R+ +Y+ G + F T RIL+VD LT R+P+
Sbjct: 67 LPRRVTNEITNNSRYEVYTQGGVIFATSRILVVDFLTDRIPS 108
>gi|297698143|ref|XP_002826187.1| PREDICTED: DNA repair endonuclease XPF [Pongo abelii]
Length = 916
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 262/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY K K +K+
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLP--------------DAKMSKKEKIS 358
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ G + E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 359 EKMEIKEGQETKK-----ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTYEK 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|348584104|ref|XP_003477812.1| PREDICTED: DNA repair endonuclease XPF-like [Cavia porcellus]
Length = 916
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 266/455 (58%), Gaps = 36/455 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L + LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIDGVDHLPRRVTNEIASNGRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVKKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHIPDA----------KMSKKSKMSEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE +PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQETKK---------ELVLESSPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL+D + G+E + + + K
Sbjct: 405 -GQVLICASDDRTCAQLKDYLTAGAEAFLLQLYRK 438
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDLNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|147900181|ref|NP_001086576.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Xenopus laevis]
gi|49903420|gb|AAH76828.1| Ercc4-prov protein [Xenopus laevis]
Length = 897
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 268/455 (58%), Gaps = 40/455 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE I +L E GLVI + GL + +++ + L L+ +L+L+++ + +
Sbjct: 4 LLEHENQIFLDLFHE--DGLVITARGLGIDRILQNFLKLYCDPGNLVLVLNTNTAEEEYL 61
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + LP I ++ R+ +Y+ G + FVT RIL+VD LT R+P + + G++
Sbjct: 62 IDQLRSEGITQLPRIINNEVATGERYDVYTQGGVLFVTSRILVVDFLTDRIPANLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ N H + E+ E FI R+ + N++ +I+AF+D P A +GF + ER+M++LF++KL+L
Sbjct: 122 VYNAHKIIESCQEAFILRLYRQKNKQGFIKAFTDNPVAFHAGFCQVERVMRNLFVKKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V+V+ L++ P VV++ V M+ M IQ +IL++M+ACLKE+++ N ++VEDL
Sbjct: 182 WPRFHVSVNSFLDKHKPEVVELHVSMTPSMLAIQSSILDIMNACLKELKRFNPALEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K+FD+ +R LDP+WH LG KTK LV DLK LR +L YL +YD VT+L L++
Sbjct: 242 SLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTMLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
++ SE +F S W+F +SS +F +A+ RV+ S + +K K+ D
Sbjct: 302 MKASEKAFGQNSGWLFLDSSTSMFVHARARVFHVPDSKAI-------------KKSKQSD 348
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E +DG + VLE PKW+ L EVL+EIE+E ++ L G
Sbjct: 349 PKEKQDGK----------KLVLESNPKWEALSEVLKEIEQE------NKNSEALGGP--- 389
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL + + G+E ++ + K
Sbjct: 390 -GRVLICASDDRTCSQLREYVAVGAEALLMRLYNK 423
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y ++SFVRQ+E+Y+A L+VYFL Y STE Q++ +R+E
Sbjct: 551 VLHEIEPRYVVLYDSEVSFVRQLEIYRASKQK-PLRVYFLIYGGSTEEQRYLTSLRKEKE 609
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M+IP
Sbjct: 610 AFEKLIREKASMVIP 624
>gi|355691568|gb|EHH26753.1| hypothetical protein EGK_16813 [Macaca mulatta]
Length = 919
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 266/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMRAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKGKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQEAKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYVTLGAEAFLLRLYRKTFEK 442
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLK---VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+ VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRQVMVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 646
>gi|134080573|emb|CAK41241.1| unnamed protein product [Aspergillus niger]
Length = 977
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 223/735 (30%), Positives = 360/735 (48%), Gaps = 97/735 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q I EL E LVIL+ GL L +L+ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDIFTELRSE--DELVILARGLGLLRLVTNLLHFYDAAGNNLVLVVGADDRENEWI 73
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
HY PL + + A +P R +YS G I VT RILIVD L++ L
Sbjct: 74 GEALAEHYAISKTPLARGLKVINTDRATVPM--REKIYSEGGILSVTSRILIVDFLSKLL 131
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ G+++L+ + S E FI R + N+ +++AFSD P +GFA M+
Sbjct: 132 DPEKVTGMVVLHADKIVATSIEAFIIRAYREHNKRGFLKAFSDAPEPFTTGFAPLANSMR 191
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRF V V+E LE V+++ VPMS M IQ A+LE ++ C+ E++K
Sbjct: 192 NLFLRKTSLWPRFHVTVAEALEGHRKAEVIELEVPMSDKMREIQNAVLECVEICIGELKK 251
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
N +D+ D T+++ L +SFD +RRQLDPIWH + +T+Q+VSDL LR +L L+ YD
Sbjct: 252 ANTGLDMADWTLDSALHRSFDVAIRRQLDPIWHRVSFRTRQIVSDLSDLRAILHALLTYD 311
Query: 290 AVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
AV++LKYLDT+ + + S W+F +++ +F A+ RVY+ S+ V
Sbjct: 312 AVSFLKYLDTIVTAHTPPPGSTKHSYSPWLFLDAADVLFQTARSRVYQGRISNDVV---- 367
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
+SSTS L+ VLEE PKW+V+ EVL+EIE +
Sbjct: 368 ----------------------RSSSTSFPTTLQPVLEEQPKWEVVAEVLQEIETDAYLN 405
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRS 461
+ +E + VL+ C D+ +C QL + + V
Sbjct: 406 PVNVDE--------SNSTVLIMCSDQRTCRQLREYMGTMHANV----------------- 440
Query: 462 VQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG 521
SSKK+++++ G D + K + + D L+ ++ +N + G
Sbjct: 441 ---SSKKQETRDTLNPG--DAIHEKKGSAEVMMRRRLRDYMDWKLSLSNVSKNFSSNPPG 495
Query: 522 DNPETYY----GSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNE 577
D P++ GS GR R R P + S + IE ++S E
Sbjct: 496 DGPQSPAVNSPGSLNQGRAPMNKRRRVRGGGTPSVPARAPNSGIQVDIEPPAQVSALLEE 555
Query: 578 GPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPI 637
E+ ET E + + D E D + +H Y + D+ I
Sbjct: 556 IQPTEVE-----------ETQKEEIIIDDLEDMD-DYYELYDMDDLVIIHPYDGDMDEHI 603
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L+ ++P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RRE +
Sbjct: 604 LEEVRPRYIIMYEPDPAFIRRVEVYRSSHVGRDVRVYFIYYGGSVEEQRYLSAVRREKDS 663
Query: 698 FESLIRQKSFMMIPI 712
F LI++KS M + I
Sbjct: 664 FTKLIKEKSNMAVTI 678
>gi|402907722|ref|XP_003916616.1| PREDICTED: DNA repair endonuclease XPF [Papio anubis]
Length = 916
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 266/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKGKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQEAKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|326482471|gb|EGE06481.1| DNA repair protein rad16 [Trichophyton equinum CBS 127.97]
Length = 987
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 227/761 (29%), Positives = 368/761 (48%), Gaps = 145/761 (19%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q ++ EL E LVIL+ GL L K+I ++L + + L++L + + +++ I
Sbjct: 16 LPYQQSLLNELRSEDE--LVILAQGLGLLKIITNLLHTYDAAGNNLIILVGASDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY +PL L T + RH +YS G I VT RIL+VDLL++ L
Sbjct: 74 GEALAEHYAISKSPLSRGLKVINTDRATVSMRHKMYSEGGIISVTSRILVVDLLSRLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I+L+ + S E FI RI + N++ ++AFSD P +GFA ++++L
Sbjct: 134 KLITGMIVLHAEKVVATSLEAFIIRIYRQHNKDGMLKAFSDTPEPFTTGFAPLSNMLRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE V+++ VPM+ M IQ A+LE ++ ++E++++N
Sbjct: 194 FLQKTSLWPRFQVTVAESLEGHRKAEVIELEVPMTDKMKEIQNAVLECVEVNIRELKRSN 253
Query: 233 K-VDV-EDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
+DV +D TV++ L K+FD +RRQLDP+WH + +T+Q+ SDL LR +L L+ +DA
Sbjct: 254 TGLDVGDDWTVDSALHKNFDVAIRRQLDPVWHRVSFRTRQIASDLTVLRSILHSLLTFDA 313
Query: 291 VTYLKYLDTLRVSESFR--------SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V+ KYLDT+ + S S W+F +++ +FD AK RVY
Sbjct: 314 VSLNKYLDTVISAHSASAGSTKQNYSPWLFLGAAHVLFDTAKSRVY-------------- 359
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
KK+ +K ++ D G +E VLEE PKW VL EVL+EIE++
Sbjct: 360 -----KKKASEKTSSSSDIFNG---------IEPVLEEQPKWAVLAEVLQEIEQDTYLNP 405
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQL---------------------------ED 435
++ G N+ +LV C D+ +C Q+ ED
Sbjct: 406 AA------PGSSNN--AILVMCSDQQTCRQVREYLSTMHKKKKSFDKNEDDEADILPHED 457
Query: 436 CIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEAS 495
+ ++ +MR + +YL K L +V K K KG + G + S
Sbjct: 458 EHQPSADTMMRRKLREYLYWKRNLSNVNNHLYDVKPKT-KGIAEVPGFTSI--------S 508
Query: 496 SVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANK 555
SV+ Q H + P R + R + A A +
Sbjct: 509 SVAPQGH--------------------------SGRAPPNKRRRVRGGSSAASA-SGAGR 541
Query: 556 DSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTA 615
+ + + ED PE+ E +++ A +E EVQ +L+ D
Sbjct: 542 PAHGSVQVDTEDVPEVPDISEE----------------VIQQAILE-EVQ-HITLEDDLQ 583
Query: 616 ------ESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSI 669
E D + VH Y + D+ +L+ L+P I++Y PD +F+R++EVY++ +
Sbjct: 584 DMDNYYELYDVNDLLVVHHYDADMDEHVLEELRPRYIIMYEPDAAFIRRVEVYRSSHQDR 643
Query: 670 KLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
++VYF++Y +S E Q++ + +RRE AF LI ++ M +
Sbjct: 644 NVRVYFMYYGESVEEQRYLSAVRREKDAFTKLIHERGTMAM 684
>gi|114661075|ref|XP_510831.2| PREDICTED: DNA repair endonuclease XPF [Pan troglodytes]
gi|397525576|ref|XP_003832737.1| PREDICTED: DNA repair endonuclease XPF [Pan paniscus]
gi|410252030|gb|JAA13982.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Pan troglodytes]
gi|410336295|gb|JAA37094.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Pan troglodytes]
Length = 916
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 262/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY K K +K+
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLP--------------DAKMSKKEKIS 358
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ G + E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 359 EKMEIKEGQETKK-----ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 442
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|109127649|ref|XP_001107209.1| PREDICTED: DNA repair endonuclease XPF isoform 3 [Macaca mulatta]
Length = 916
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 266/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKGKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQEAKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYVTLGAEAFLLRLYRKTFEK 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|291390625|ref|XP_002711804.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 4 [Oryctolagus
cuniculus]
Length = 909
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/482 (36%), Positives = 277/482 (57%), Gaps = 43/482 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVHSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPTLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY S ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHVPDS----------KMSKKGKMSEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE PKW+ L EVL+EIE A ++E +L G
Sbjct: 363 IKEEQETKK---------ELVLECNPKWEALTEVLKEIE------AENKESEVLGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVM----REEWEKYLLSK---VQLRSVQTSSKKK 469
G VL+ D+ +C QL+ + G+E + R+ ++K ++ +LR SS+ +
Sbjct: 405 -GQVLICASDDRTCSQLQGYLTAGAEAFLLGLYRQAFDKDSRAEEVWARLRKADGSSRTR 463
Query: 470 KS 471
+S
Sbjct: 464 RS 465
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 567 DKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPV 626
++P G EG E+ S G + G + +++ L +D A +P+ +
Sbjct: 496 EEPAEEGDVEEGSHGEVSSSPEGAAEG--------RHAEFEVQLSSDAAYGVLQEPLTII 547
Query: 627 HFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDST 682
H SD +L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y ST
Sbjct: 548 HPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGST 607
Query: 683 EVQKFKAGIRRENGAFESLIRQKSFMMIP 711
E Q++ +R+E AFE LIR+K+ M++P
Sbjct: 608 EEQRYLTALRKEKEAFEKLIREKASMVVP 636
>gi|342874038|gb|EGU76113.1| hypothetical protein FOXB_13359 [Fusarium oxysporum Fo5176]
Length = 950
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 212/739 (28%), Positives = 360/739 (48%), Gaps = 117/739 (15%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQG---TLLLLSSSPNL 57
+ LE+ Q + EL E LV+++ GL L +L+ + LLHS G ++++++
Sbjct: 27 LSLEYQQTLFQELRVEDE--LVVIARGLGLMRLVNN--LLHSYDAGGNNLIVIVAADERE 82
Query: 58 KSQIIHYLAPNAPLLPSE-------ITADLPA-NHRHTLYSSGQIFFVTPRILIVDLLTQ 109
I LA +A + S + D + R +YS G IF +T RIL+VDLLT
Sbjct: 83 NGWIGEALAEHAAISMSPKARGLTVVNTDFQSVGAREKMYSGGGIFSITSRILVVDLLTG 142
Query: 110 RLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERI 169
L ++ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +
Sbjct: 143 LLNPESITGLVVLHADRVVATSLEAFILRVYRQKNKIGFLKAFSDNPDPFTTGFSPLATM 202
Query: 170 MKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
M++LF+RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E+
Sbjct: 203 MRNLFLRKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMREIQNAIMECVEVSIHEL 262
Query: 229 RKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVR 287
+K N ++++D +++ L K+FD ++RRQLDP WH + KTKQ+V+DL LR +L+ ++
Sbjct: 263 KKGNSGLEMDDWNLDSALLKNFDIMVRRQLDPNWHRVSWKTKQIVNDLTVLRAMLNSILS 322
Query: 288 YDAVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELN 339
YDAV++L++LDT+ + S +S W+F +++ IFD A++RVY + D
Sbjct: 323 YDAVSFLQHLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTIFDTARRRVYSASAKDAAR-- 380
Query: 340 GQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERL 399
+D D L VLEE PKW +L EVLEEI+ +
Sbjct: 381 ------------------EDDIDS----------LRPVLEELPKWALLAEVLEEIDRDLY 412
Query: 400 KQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQL 459
+ R++ +G +L+ C + +C QL D ++ ++ K +
Sbjct: 413 FEPPVRDD--------SNGTILIMCSNTDTCRQLRDFLQT-----------MHVKPKTEK 453
Query: 460 RSVQTSSKKKKSKEPKGYGILDGVAPVKIA---QNAEASSVSKQEHDALLAAASKIRNQG 516
RS + + K P ++ + Q A+ S+ E+ L A+ R
Sbjct: 454 RSSEDDEDEDK---PSAAFMMRRRLRNYLKWKRQFAQVSATLFSENQKALNGATDTR--- 507
Query: 517 KSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGN 576
+ GS+G K R G V S + + IE E++
Sbjct: 508 --------PGFAGSRGGKAPANKRRRVRGGGNVGVSMGRAENGSIMQYIEKPGEVADL-- 557
Query: 577 EGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHFY 629
M E E+E Q K + D ++ D + + +H Y
Sbjct: 558 -----------------MAEVQITEEEAQQKEDVVADPLDNMEEYFKLYDMQDLVVIHAY 600
Query: 630 ALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKA 689
+ D+ +L+ KP I++Y PD +F+R++EVY++ + ++VYF++Y S E QK+ +
Sbjct: 601 DGDQDEHVLEETKPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQKYLS 660
Query: 690 GIRRENGAFESLIRQKSFM 708
+RRE AF LI++++ M
Sbjct: 661 SVRREKDAFTKLIKERASM 679
>gi|412991258|emb|CCO16103.1| predicted protein [Bathycoccus prasinos]
Length = 1135
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 245/393 (62%), Gaps = 24/393 (6%)
Query: 65 LAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
L P P ++TAD+ R Y+ G FVT RI VDLL RLP N+AG+I+ N
Sbjct: 143 LYPEVAHAPLDVTADVSMAIRARNYAIGTPCFVTSRIFAVDLLANRLPAENVAGMIVANA 202
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H++ + S E F R+ + NR ++R +D+P F ER MKSLF+R + WPRF
Sbjct: 203 HSVEDISGEGFCARLFREKNRRGFMRGLTDRPYDASKAFEGVERSMKSLFVRNVTFWPRF 262
Query: 185 QVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENG 244
++NV L+ P VV++R M++ M IQ+AI++VMD C+KE+RK++ VDV +LTV++G
Sbjct: 263 RMNVKSCLDPHEPNVVELRQEMTEDMKKIQEAIVQVMDQCMKELRKSDFVDVAELTVQSG 322
Query: 245 LFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE 304
LFKSFD + RQL+P+W+I+ +KTKQLV DL+TLR+L D +++ DAV++LK+ + L+V+E
Sbjct: 323 LFKSFDATISRQLEPMWNIVPRKTKQLVRDLRTLRRLADLVLKIDAVSFLKHCEMLKVTE 382
Query: 305 SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGG 364
+ S W+F++++ +IF AK RVYR R +E++ Q KK +L+ ++ +++
Sbjct: 383 RYDSYWMFSDAAGEIFKRAKDRVYRLKRK-PIEISKQ------KKEELRALNIKDEKKYE 435
Query: 365 TSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVAC 424
TS T E PKW +L EV++EI E+ AS R+ ++D IV VA
Sbjct: 436 TSVVPT-------FEPMPKWMLLEEVIQEIRED----ASDRK-----LPKDDQRIV-VAA 478
Query: 425 KDECSCMQLEDCIRNGSEKVMREEWEKYLLSKV 457
KDE + LE + +GSEKV +WE +L S+V
Sbjct: 479 KDEAAVRVLEMLLVHGSEKVSNAKWEDFLKSRV 511
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 626 VHFYALESDQPI-LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEV 684
++F +++ P L I P ++VY PD +F+R++EV+ A P KL VYFL +++STE
Sbjct: 672 IYFVPIDARDPSQLAIYAPSYVIVYDPDAAFIRELEVFAASRPQRKLTVYFLMHDNSTEE 731
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
+K+ A I+RE AFE L K M +P +Q
Sbjct: 732 EKYLAAIKRETAAFERLFMMKQHMAVPEEQ 761
>gi|355756568|gb|EHH60176.1| hypothetical protein EGM_11492 [Macaca fascicularis]
Length = 919
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 266/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDA----------KMSKKGKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQEAKK---------ELVLESNPKWEALIEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYVTLGAEAFLLRLYRKTFEK 442
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 530 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 589
Query: 658 QIEVYKAENPSIKLK---VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+ VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 590 QLEIYRASRPGKPLRQVMVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 646
>gi|83772633|dbj|BAE62761.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391873497|gb|EIT82527.1| structure-specific endonuclease ERCC1-XPF, catalytic component
XPF/ERCC4 [Aspergillus oryzae 3.042]
Length = 896
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 323/641 (50%), Gaps = 82/641 (12%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y+ G I VT RIL+VDLL++ L + G+++L+ + STE FI RI + +N
Sbjct: 23 RERIYAEGGILSVTSRILVVDLLSKLLDPEKITGMVVLHADKIMATSTEAFIIRIFRQIN 82
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P +GFA M++LF+RK LWPRF V V+E LE V+++
Sbjct: 83 KNGFLKAFSDSPEPFTTGFAPLANSMRNLFLRKASLWPRFHVTVAESLEGHRKAEVIELE 142
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPMS M +Q A+LE ++ C+ E++K N +D+ D T+++ L +SFD ++RRQLDPIWH
Sbjct: 143 VPMSDKMREMQNAVLECVEICIGELKKANTGLDMADWTLDSALHRSFDIMIRRQLDPIWH 202
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAE 314
+ +T+Q+VSDL LR +L L+ YD+V+++KYLDT+ + S S W+F +
Sbjct: 203 RVTFRTRQIVSDLSDLRAILHALLTYDSVSFVKYLDTIVTAHSPPPGSTRHNYSPWLFLD 262
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
+++ +F AK R Y+ S+ V +S S L
Sbjct: 263 AAHVLFQTAKSRAYQGKISNDV--------------------------ARSSLNSFPTTL 296
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
+ VLEE PKW+VL EVLEEIE + + +E + +L+ C D+ +C QL
Sbjct: 297 QPVLEEQPKWEVLAEVLEEIENDAYLNPVNVDE--------SNSTILIMCTDQRTCRQLR 348
Query: 435 DCIRNGSEKVMRE-EWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAE 493
+ + V E E +K + ++ S Q +++ + L N
Sbjct: 349 EYLGTMHAHVNDENEDDKDIGDNIKKGSAQVMMRRRLREYLNWKTSL---------SNVT 399
Query: 494 ASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSA 553
+ SK +D A GKS D P G P + R R R G A V ++
Sbjct: 400 KNLTSKPTNDESQA--------GKSQDSPRPSAPQGRAPPNKRR---RVRGGGA-VTSAS 447
Query: 554 NKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKT- 612
+ S+ + +E ++S E EI V+KE L+
Sbjct: 448 GRVPNSSVQTDVELPGQVSNLLEEIQPTEIEE--------------VQKEDIIIDDLEDM 493
Query: 613 -DTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKL 671
D E D + +H Y + D+ IL+ ++P I++Y PD +F+R++EVY++ + +
Sbjct: 494 EDFYELYDMDDLIMIHPYDGDMDEHILEEVRPRYIIMYEPDSAFIRRVEVYRSSHVGRNV 553
Query: 672 KVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
+VYF++Y S E Q++ + +RRE +F LI++K M + +
Sbjct: 554 RVYFMYYGGSVEEQRYLSAVRREKDSFTKLIKEKGNMAVTL 594
>gi|410985171|ref|XP_003998897.1| PREDICTED: DNA repair endonuclease XPF [Felis catus]
Length = 916
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 178/487 (36%), Positives = 280/487 (57%), Gaps = 44/487 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 ISQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTNRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+ KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVGKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++N + K +K ++++V
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDA---KMNKKGK--VSEKTEIEQVQ 367
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 368 ETKK--------------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEKYLLSK---VQLRSVQTSSKKK 469
G VL+ DE +C QL + I G+E ++ R+ +E+ ++ VQ R+ ++ +
Sbjct: 405 -GQVLICASDERTCSQLREYITIGAEAFLLRLYRKTFERDSKAEDVWVQFRNEDSAKRMA 463
Query: 470 KS-KEPK 475
KS K PK
Sbjct: 464 KSHKRPK 470
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 586 GVVGYSGGMLETAFVE-KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDI 640
G G +G +++ E K ++ +L +D A P+ +H SD +L
Sbjct: 513 GCPGDTGSSPDSSLEEIKHEEFDLNLSSDAAYGILKDPLTIIHPLLGCSDPYALTRVLHE 572
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE
Sbjct: 573 VEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEK 632
Query: 701 LIRQKSFMMIP 711
LIR+K+ M++P
Sbjct: 633 LIREKASMVVP 643
>gi|194219216|ref|XP_001490470.2| PREDICTED: DNA repair endonuclease XPF isoform 2 [Equus caballus]
Length = 1008
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 278/484 (57%), Gaps = 41/484 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVKKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY N ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVY----------NVPDDKMSKKGKMSEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEEQETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK-YLLSKVQLRSVQTSSKKKKS 471
G VL+ D+ +C QL + I G+E ++ R+ +EK +V ++ Q S K+ +
Sbjct: 405 -GQVLICASDDRTCSQLREYIAVGAEAFLLRLYRKTFEKDSKAEEVWMKFRQEDSSKRMA 463
Query: 472 KEPK 475
K K
Sbjct: 464 KSNK 467
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 596 ETAFVE-KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYH 650
E+ F E K ++ +L +D+A P+ +H SD +L ++P +V+Y
Sbjct: 523 ESCFEEIKHEEFDLNLSSDSAYGILKDPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYD 582
Query: 651 PDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIR 703
+++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR
Sbjct: 583 AELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIR 635
>gi|41054253|ref|NP_956079.1| DNA repair endonuclease XPF [Danio rerio]
gi|32766570|gb|AAH54895.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Danio rerio]
Length = 886
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 258/437 (59%), Gaps = 38/437 (8%)
Query: 20 GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL-APNAPLLPSEITA 78
GL+I GL + +L+ + ++S +LLL++S + + L A LP +T+
Sbjct: 21 GLLITGEGLGIDRLLLHFMKVYSEEGSLVLLLNTSTPEQEYLTERLRAEGVTHLPQTVTS 80
Query: 79 DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICR 138
D+ + R+ +Y+ G + FVT RIL+VD LT R+P + G+++ H + E+ E FI R
Sbjct: 81 DVQSADRYNVYTKGGVLFVTSRILVVDFLTDRIPAHLVTGILVYRAHNIIESCQEAFILR 140
Query: 139 IIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPV 198
+ + N+ +I+AF+DK T+ SGF K ER+M++LF++KL LWPRFQ +V+ L++ P
Sbjct: 141 LYRQKNKTGFIKAFTDKATSFSSGFCKVERVMRNLFVKKLFLWPRFQASVNATLDKHKPD 200
Query: 199 VVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQL 257
VV++ V ++ M IQ +IL++M+ACLKE+++ N ++ EDL++EN L +F++ +R L
Sbjct: 201 VVELHVTLTPAMRAIQSSILDIMNACLKELKRYNPTLEAEDLSLENSLGTAFEKTIRHYL 260
Query: 258 DPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE-SF--RSVWIFAE 314
DP+WH LG +TK LV DLK LR LL YL +YD VT+L L++LR S+ SF S W+F +
Sbjct: 261 DPLWHQLGSRTKSLVQDLKILRTLLLYLTQYDCVTFLNLLESLRTSQKSFGSNSGWLFLD 320
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
SS +F A+ RVYR S K+KLK + + ++
Sbjct: 321 SSMSMFVNARSRVYRIQES---------------KKKLKVGETEQKQNLAPPKR------ 359
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
E VLE+ PKW+ L EVL+EIE+E K E++ G VL+ D+ +C QL+
Sbjct: 360 ELVLEKNPKWEALTEVLQEIEKENSKS------------EHEPGRVLICASDDRTCAQLK 407
Query: 435 DCIRNGSEKVMREEWEK 451
+ I+ G E ++ + +
Sbjct: 408 EYIQKGPEHLLNRLYSR 424
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L + P +V+Y ++SFVRQ+E+YKA P L+VYFL Y STE Q++ + +E
Sbjct: 540 VLHEVDPMFVVLYDAELSFVRQLEIYKACRPGKPLRVYFLIYGGSTEEQRYLTALNKEKQ 599
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 600 AFEHLIREKASMVVP 614
>gi|408388573|gb|EKJ68254.1| hypothetical protein FPSE_11557 [Fusarium pseudograminearum CS3096]
Length = 937
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 208/740 (28%), Positives = 357/740 (48%), Gaps = 123/740 (16%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
LE+ Q + EL + LV+++ GL L +L+ ++L + + L+++ + +
Sbjct: 16 LEYQQSLFQEL--RADDELVVIARGLGLMRLVNNLLHSYDAAGSNLIVVVGADDRENGWI 73
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L ++P A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISMSPKARGLTVVNTDSQSVGAREKIYTKGGIFSITSRILVVDLLTSLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ESITGLVVLHADRVIATSLEAFILRVYRQKNKIGFLKAFSDNPDPFTTGFSPLATMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 194 FLRKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMRDIQTAIMECVEVSIHELKKGN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L K+FD I+RRQLDP WH + KTKQ+V+DL LR +L+ ++ YDAV
Sbjct: 254 SGLEMDDWNLDSALLKNFDVIVRRQLDPNWHRVSWKTKQIVNDLTVLRGMLNSILSYDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ IFD A++RVY
Sbjct: 314 SFLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQTIFDTARRRVY--------------- 358
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ R + DN + L VLEE PKW +L EVLEEI+ + +
Sbjct: 359 --SASARDAAREDNIDS-------------LRPVLEELPKWALLAEVLEEIDRDLYFEPP 403
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN-----GSEKVMREEWE---KYLLS 455
R++ +G +LV C + +C QL D ++ +EK + E+ E K +
Sbjct: 404 IRDD--------SNGTILVMCSNTDTCRQLRDFLQTMHVKPKTEKRVNEDEEDEDKPSAA 455
Query: 456 KVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQ 515
+ R ++ K K+ Q A+ S+ E+ L A+ R
Sbjct: 456 FMMRRRLRNYLKWKR-------------------QFAQVSATLFSENQKALNGATDTR-- 494
Query: 516 GKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSG 575
+ G +G K R G S + + IE E++
Sbjct: 495 ---------PGFGGLRGGKAPANKRRRMRGGGNAGTSMGRAENGSIMQYIEKPGEVADL- 544
Query: 576 NEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHF 628
M E +E Q K + +D ++ D + + VH
Sbjct: 545 ------------------MAEVQITVEEAQQKEEVVSDPLDNMEEYFKMYDMQDLVVVHA 586
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y + D+ +L+ KP I++Y PD +F+R++EVY++ + ++VYF++Y S E QK+
Sbjct: 587 YGGDQDEHVLEETKPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQKYL 646
Query: 689 AGIRRENGAFESLIRQKSFM 708
+ +RRE AF +I++++ M
Sbjct: 647 SSVRREKDAFTKVIKERASM 666
>gi|350637138|gb|EHA25496.1| hypothetical protein ASPNIDRAFT_53960 [Aspergillus niger ATCC 1015]
Length = 970
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 199/642 (30%), Positives = 317/642 (49%), Gaps = 82/642 (12%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +YS G I VT RILIVD L++ L + G+++L+ + S E FI R + N
Sbjct: 98 REKIYSEGGILSVTSRILIVDFLSKLLDPEKVTGMVVLHADKIVATSIEAFIIRAYREHN 157
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P +GFA M++LF+RK LWPRF V V+E LE V+++
Sbjct: 158 KRGFLKAFSDAPEPFTTGFAPLANSMRNLFLRKTSLWPRFHVTVAEALEGHRKAEVIELE 217
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPMS M IQ A+LE ++ C+ E++K N +D+ D T+++ L +SFD +RRQLDPIWH
Sbjct: 218 VPMSDKMREIQNAVLECVEICIGELKKANTGLDMADWTLDSALHRSFDVAIRRQLDPIWH 277
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAE 314
+ +T+Q+VSDL LR +L L+ YDAV++LKYLDT+ + + S W+F +
Sbjct: 278 RVSFRTRQIVSDLSDLRAILHALLTYDAVSFLKYLDTIVTAHTPPPGSTKHSYSPWLFLD 337
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
++ +F A+ RVY+ S+ V +SSTS L
Sbjct: 338 AADVLFQTARSRVYQGRISNDVV--------------------------RSSSTSFPTTL 371
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
+ VLEE PKW+V+ EVL+EIE + + +E + VL+ C D+ +C QL
Sbjct: 372 QPVLEEQPKWEVVAEVLQEIETDAYLNPVNVDE--------SNSTVLIMCSDQRTCRQLR 423
Query: 435 DCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEA 494
+ + V SSKK+++++ G D + K +
Sbjct: 424 EYMGTMHANV--------------------SSKKQETRDTLNPG--DAIHEKKGSAEVMM 461
Query: 495 SSVSKQEHDALLAAASKIRNQGKSDDGDNPETYY----GSKGPGRGRGKGRNRNGPACVP 550
+ D L+ ++ +N + GD P++ GS GR R R P
Sbjct: 462 RRRLRDYMDWKLSLSNVSKNFSSNPPGDGPQSPAVNSPGSLNQGRAPMNKRRRVRGGGTP 521
Query: 551 QSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSL 610
+ S + IE ++S E E+ ET E + +
Sbjct: 522 SVPARAPNSGIQVDIEPPAQVSALLEEIQPTEVE-----------ETQKEEIIIDDLEDM 570
Query: 611 KTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIK 670
D E D + +H Y + D+ IL+ ++P I++Y PD +F+R++EVY++ +
Sbjct: 571 D-DYYELYDMDDLVIIHPYDGDMDEHILEEVRPRYIIMYEPDPAFIRRVEVYRSSHVGRD 629
Query: 671 LKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
++VYF++Y S E Q++ + +RRE +F LI++KS M + I
Sbjct: 630 VRVYFIYYGGSVEEQRYLSAVRREKDSFTKLIKEKSNMAVTI 671
>gi|255951024|ref|XP_002566279.1| Pc22g23880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593296|emb|CAP99676.1| Pc22g23880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 972
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 216/740 (29%), Positives = 363/740 (49%), Gaps = 110/740 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L LI+++L + + L+L+ + +++ I
Sbjct: 16 LQYQQELFTELRAEDE--LVILARGLGLLHLISNLLHFYDAAGNNLVLVVGADQRENEWI 73
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
HY +PL + + A +P R +Y G I VT RIL+VDLL++ L
Sbjct: 74 GEALAEHYATSKSPLARGLKVINTEKATVPLRER--MYGEGGILSVTSRILVVDLLSKLL 131
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ G++IL+ + S E FI R+ + N+ +++AFSD P +GF+ +++
Sbjct: 132 DPEKVTGMVILHADKVLATSLEAFIVRVYRQSNKRGFLKAFSDSPEPFTTGFSPLANMLR 191
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRF V+V+E LE V+++ VPMS M IQ A+LE ++ + E+RK
Sbjct: 192 NLFLRKASLWPRFHVSVAESLEGNRKAEVIELEVPMSDKMREIQNAVLECVEISITELRK 251
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
+N +D+E+ T+++ L ++FD I+RRQLDPIWH + +T+Q+VSDL LR +L L+ YD
Sbjct: 252 SNTGLDMEEWTLDSALHRNFDMIIRRQLDPIWHRVSFRTRQIVSDLTDLRAILHALLSYD 311
Query: 290 AVTYLKYLDTL--------RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
AV+++KYLDT+ S S W+F ++++ +F AK RVY +G +LN +
Sbjct: 312 AVSFVKYLDTIVSANAPPPGSSRHSYSPWLFLDAAHVLFQTAKSRVY-----EG-KLNNE 365
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE---- 397
+ +SST+ L LEE PKW VL EVL EIE +
Sbjct: 366 LTRL-------------------SSSTTFSSELNPALEELPKWSVLSEVLAEIEHDAYLH 406
Query: 398 --RLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLS 455
R+ Q++S +L+ C D+ C QL + I K+ + +
Sbjct: 407 PVRMDQSNS--------------TILIMCSDQRVCRQLREYIGTMHAKIAQASESEDDDP 452
Query: 456 KVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQ 515
S + +++ + LD S+V+K +
Sbjct: 453 SDDKPSAELMMRRRLRE------YLDW--------KRSLSNVNK-----------NLSQS 487
Query: 516 GKSDDGDNPETYYGSKGPGRGR---GKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEIS 572
G+ D P ++ +GR K R G V +A + S+ + +E ++
Sbjct: 488 GEDDRSGKPSESPAAQSAHQGRPPPNKRRRVRGGGAVTSAAGRVPSSSVQTEVELPGQVV 547
Query: 573 GSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALE 632
G +E ++ E E+ + + D E D + +H Y +
Sbjct: 548 GLLSEIQPTKV------------EETQKEEVILDELEDMEDFYELYDMNDLVMIHPYDGD 595
Query: 633 SDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIR 692
D+ IL+ ++P I++Y PD +F+R++EVY++ + +KVYF++Y S E Q++ + +R
Sbjct: 596 MDEHILEEVRPRYIIMYEPDPAFIRRVEVYRSSHSGRNVKVYFMYYGGSVEEQRYLSAVR 655
Query: 693 RENGAFESLIRQKSFMMIPI 712
RE +F LI++K M + +
Sbjct: 656 REKDSFTKLIKEKGNMAVTL 675
>gi|350581698|ref|XP_003124634.2| PREDICTED: DNA repair endonuclease XPF [Sus scrofa]
Length = 623
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 265/455 (58%), Gaps = 36/455 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N+R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNNRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAIAFDTGFCHVERVMRNLFVKKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V+V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVSVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + ++++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSLFVNARARVYHVPDT----------KMSKKGKMPEEIE 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E++D E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEEQDTKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL + + G+E + + K
Sbjct: 405 -GQVLICASDDRTCSQLREYLAVGAEAFLLRLYRK 438
>gi|384253847|gb|EIE27321.1| hypothetical protein COCSUDRAFT_34768 [Coccomyxa subellipsoidea
C-169]
Length = 851
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 234/390 (60%), Gaps = 45/390 (11%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
+P E+T ++PA R LY + F+T RIL+VDLLT RL +AGL+++N H +T+ S
Sbjct: 1 MPVEVTNEMPAAARAELYRTQSCLFITTRILVVDLLTNRLQAHQVAGLLVMNAHTVTDMS 60
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E F R+ + N+ ++RA SD+P A +GF+K E++MK+L++RKL +WPRF+ +V +
Sbjct: 61 GEGFAVRLFRQGNQGGFVRAISDQPHAFAAGFSKLEKVMKALYVRKLFIWPRFEAHVKDT 120
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDE 251
L P V+++ M+ M I +I +++D C+K ++++NK+D D ++E LF+SFDE
Sbjct: 121 LNDLPIEVIELAQEMTPPMVAIYDSITDLLDVCIKHLKRSNKIDTSDFSLEECLFRSFDE 180
Query: 252 ILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWI 311
I+RRQLD +WH + +TKQ+V++L+TLR L +YL+ +DAVT+L YL+ LR ES SVW+
Sbjct: 181 IVRRQLDSVWHTITPQTKQVVNNLRTLRTLAEYLLCFDAVTFLSYLENLRAGESVNSVWL 240
Query: 312 FAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR-KLKKVDNNEDEDGGTSSTST 370
F E+++ IFD AKKRVY EL S++ K K K+ + + D G SS +
Sbjct: 241 FQEAAHTIFDQAKKRVY--------ELQQASRNAAAAKNGKRKRAVSKDIADAGASSEAV 292
Query: 371 KVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSC 430
+VV LE PKW++++E+++ +C
Sbjct: 293 EVV--PTLEPLPKWELVKEIVQ----------------------------------ARTC 316
Query: 431 MQLEDCIRNGSEKVMREEWEKYLLSKVQLR 460
QL D +++ + VM++ + YLL+++ R
Sbjct: 317 QQLRDVLQSDVQPVMQQLFNDYLLTRLDAR 346
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 617 SKDSKPVPPVHFYALES--DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVY 674
+ DS + V F+ALES D + D+ FV++V D++FVRQ+EVY A L+VY
Sbjct: 472 AADSPMLQGVKFHALESRNDAVLWDVQPSFVVMV-DSDVAFVRQLEVYAAGRGKAPLRVY 530
Query: 675 FLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
L Y+DS E ++ A ++RE FE LI K M++P
Sbjct: 531 NLRYKDSFEQDRYMAALQREQRVFEDLIHSKGHMVLP 567
>gi|426255149|ref|XP_004021225.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF [Ovis
aries]
Length = 1031
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 265/459 (57%), Gaps = 41/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 126 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 183
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +++R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 184 INQLKIEGVEHLPRRVTNEITSSNRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 243
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 244 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 303
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 304 WPRFHVAVNSFLELHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 363
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 364 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 423
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + +T K + +K++
Sbjct: 424 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHVPDA----------KMTRKSKLPEKLE 473
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E E E VLE PKW L EVL+EIE A ++E +L G
Sbjct: 474 IKEQETKK----------ELVLESNPKWAALTEVLKEIE------AENKESEVLGGP--- 514
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + + G+E ++ R+ +EK
Sbjct: 515 -GQVLICASDDRTCSQLREYLTVGAEVFLLRLYRKTFEK 552
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E
Sbjct: 679 VLHEVEPRYVVLYDAELTFVRQLEIYRATRPGKPLRVYFLIYGGSTEEQRYLTALRKEKE 738
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M+IP
Sbjct: 739 AFEKLIREKASMVIP 753
>gi|390471320|ref|XP_002755959.2| PREDICTED: DNA repair endonuclease XPF [Callithrix jacchus]
Length = 905
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 279/487 (57%), Gaps = 44/487 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ +
Sbjct: 4 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQSAEEEYF 61
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 62 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 122 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 182 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 302 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDA----------KISKKGKISEKME 351
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 352 VKEGQETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 393
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEKYLLSK---VQLRSVQTSSKKK 469
G VL+ D+ +C QL D + G E ++ R+ +EK ++ ++LR +S++
Sbjct: 394 -GQVLICASDDRTCSQLRDYLTLGVEAFLLRLYRKTFEKDSTAEEVWMKLRKEDSSNRIM 452
Query: 470 KS-KEPK 475
KS + PK
Sbjct: 453 KSHRRPK 459
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 570 EISGSGN--EGPADEIHSGVVGYSGGMLETAFVE-KEVQWKRSLKTDTAESKDSKPVPPV 626
E+ G G+ EG EI S E+ E K ++ +L +D +P+ +
Sbjct: 492 ELEGEGDVEEGYRQEIRSSP--------ESCLAEIKHEEFDVNLSSDAVYGILKEPLTII 543
Query: 627 HFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDST 682
H SD +L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y ST
Sbjct: 544 HPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGST 603
Query: 683 EVQKFKAGIRRENGAFESLIRQKSFMMIP 711
E Q++ +R+E AFE LIR+K+ M++P
Sbjct: 604 EEQRYLTALRKEKEAFEKLIREKASMVVP 632
>gi|281340601|gb|EFB16185.1| hypothetical protein PANDA_006513 [Ailuropoda melanoleuca]
Length = 927
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 265/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 12 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 69
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 70 INQLKVEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 129
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+ KL+L
Sbjct: 130 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVGKLYL 189
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 190 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 249
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 250 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 309
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + + K + +K++
Sbjct: 310 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDA----------KMNKKGKMSEKME 359
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 360 IKEEQETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 401
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + I G+E ++ R+ +EK
Sbjct: 402 -GQVLICASDDRTCSQLREYITVGAEAFLLRLYRKTFEK 439
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 14/89 (15%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK--------------VYFLFYEDST 682
+L ++P +V+Y +++FVRQ+E+Y+A P L+ VYFL Y ST
Sbjct: 566 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRQVMKNMSCCFFLFLVYFLIYGGST 625
Query: 683 EVQKFKAGIRRENGAFESLIRQKSFMMIP 711
E Q++ +R+E AFE LIR+K+ M++P
Sbjct: 626 EEQRYLTALRKEKEAFEKLIREKASMVVP 654
>gi|301765386|ref|XP_002918113.1| PREDICTED: DNA repair endonuclease XPF-like [Ailuropoda
melanoleuca]
Length = 913
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 265/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 12 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 69
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 70 INQLKVEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 129
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+ KL+L
Sbjct: 130 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVGKLYL 189
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 190 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 249
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 250 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 309
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + + K + +K++
Sbjct: 310 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDA----------KMNKKGKMSEKME 359
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 360 IKEEQETKK---------ELVLESNPKWEALTEVLKEIE------AENKESEALGGP--- 401
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + I G+E ++ R+ +EK
Sbjct: 402 -GQVLICASDDRTCSQLREYITVGAEAFLLRLYRKTFEK 439
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E
Sbjct: 566 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKE 625
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 626 AFEKLIREKASMVVP 640
>gi|358371071|dbj|GAA87680.1| DNA repair protein RAD1 [Aspergillus kawachii IFO 4308]
Length = 981
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 221/734 (30%), Positives = 358/734 (48%), Gaps = 97/734 (13%)
Query: 4 EFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII- 62
++ Q I EL E LVIL+ GL L +L+ ++L + + L+L+ + + +++ I
Sbjct: 21 QYQQDIFTELRSEDE--LVILARGLGLLRLVTNLLHFYDAAGNNLVLVVGADDRENEWIG 78
Query: 63 -----HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLP 112
HY PL + + A +P R +YS G I VT RILIVD L++ L
Sbjct: 79 EALAEHYAISKTPLARGLKVINTDRATVPM--REKIYSEGGILSVTSRILIVDFLSKLLD 136
Query: 113 TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKS 172
+ G+I+L+ + S E FI R + N+ +++AFSD P +GFA +++
Sbjct: 137 PEKVTGMIVLHADKIVATSIEAFIIRAYREHNKRGFLKAFSDSPEPFTTGFAPLANSLRN 196
Query: 173 LFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKT 231
LF+RK LWPRF V V+E LE V+++ VPMS M IQ A+LE ++ C+ E++K
Sbjct: 197 LFLRKTSLWPRFHVTVAEALEGHRKAEVIELEVPMSDKMREIQNAVLECVEICIGELKKA 256
Query: 232 NK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
N +D+ D T+++ L +SFD +RRQLDPIWH + +T+Q+VSDL LR +L L+ YDA
Sbjct: 257 NTGLDMADWTLDSALHRSFDIAIRRQLDPIWHRVSFRTRQIVSDLSDLRAILHALLTYDA 316
Query: 291 VTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V++LKYLDT+ + + S W+F +++ +F A+ RVY+ S+ V
Sbjct: 317 VSFLKYLDTIVTAHTPPPGSTKHSYSPWLFLDAADVLFQTARSRVYQGRISNDVV----- 371
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
+SSTS L+ VLEE PKW+V+ EVL+EIE +
Sbjct: 372 ---------------------RSSSTSLPTTLQPVLEEQPKWEVVAEVLQEIETDAYLNP 410
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV 462
+E + VL+ C D+ +C QL + + V
Sbjct: 411 VKVDE--------SNSTVLIMCSDQRTCRQLREYMGTMHANV------------------ 444
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGD 522
SSKK+++++ G D + K + + D L+ ++ +N + GD
Sbjct: 445 --SSKKQETRDTLDPG--DAIHEKKGSAEVMMRRRLRDYMDWKLSLSNVSKNFSSNPAGD 500
Query: 523 NPETYY----GSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEG 578
++ GS GR R R P + S + IE ++S +E
Sbjct: 501 GSQSPAVNSPGSLNQGRAPMNKRRRVRGGGTPSVPARAPNSGIQVDIEPPAQVSALLDEI 560
Query: 579 PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPIL 638
E+ ET E + + D E D + +H Y + D+ IL
Sbjct: 561 QPTEVE-----------ETQKEEVIIDDLEDMD-DYYELYDMDDLVIIHPYDGDMDEHIL 608
Query: 639 DILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAF 698
+ ++P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RRE +F
Sbjct: 609 EEVRPRYIIMYEPDPAFIRRVEVYRSSHVGRDVRVYFIYYGGSVEEQRYLSAVRREKDSF 668
Query: 699 ESLIRQKSFMMIPI 712
LI++KS M + I
Sbjct: 669 TKLIKEKSNMAVTI 682
>gi|329299043|ref|NP_001192289.1| DNA repair endonuclease XPF [Bos taurus]
gi|296473370|tpg|DAA15485.1| TPA: excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Bos taurus]
Length = 916
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 268/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ ++R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITGSNRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLELHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K R +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHVPDA----------KMSKKSRLPEKLE 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ TK L VLE PKW L EVL+EIE A ++E +L G
Sbjct: 363 IKEEQE-------TKKDL--VLESNPKWAALTEVLKEIE------AENKESEVLGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + + G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLREYLTVGAEVFLLRLYRKTFEK 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E
Sbjct: 569 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKE 628
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M+IP
Sbjct: 629 AFEKLIREKASMVIP 643
>gi|126334895|ref|XP_001375532.1| PREDICTED: DNA repair endonuclease XPF [Monodelphis domestica]
Length = 983
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 264/455 (58%), Gaps = 36/455 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL+ GLV+ + GL +L+ + LH +L+L++ P +
Sbjct: 90 LLEYERQLVLELLE--TDGLVVCARGLGADRLLYHFIRLHCHPGCLVLVLNTQPAEEEYF 147
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ + R+ +Y+ G + FVT RIL+VD LT R+P+ + G++
Sbjct: 148 INQLKLEEVEHLPRRVTNEIASGSRYEVYTQGGVLFVTSRILVVDFLTDRIPSDLITGIL 207
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + ++ E FI R+ + N+ +I+AFSD A +GF ER+M++LF+RKL+L
Sbjct: 208 VYKAHRIIDSCQEAFILRLFRQKNKHGFIKAFSDNAIAFDTGFCHVERVMRNLFVRKLYL 267
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 268 WPRFHVAVNSFLEQHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKCYNPSLEVEDL 327
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 328 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 387
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + + KK K+ +
Sbjct: 388 LRATEKAFGQNSGWLFLDSSTTMFVNARARVYHI-----------ADTRMNKKCKMTEKT 436
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
N ++ + ++ E VLE PKW+ L EVL+EIE E ++ E L
Sbjct: 437 NIKE--------NQEMKRELVLESNPKWEALTEVLKEIETE-----NNNSEAL-----GG 478
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL + I G++ + + + K
Sbjct: 479 PGQVLICASDDRTCAQLREYITIGAKAFLLKIYTK 513
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 600 VEKEVQWKRSLKTDTAESKDSKPVPPVHF-------YALESDQPILDILKPFVIVVYHPD 652
E EV + +L +D A +P+ +H YAL +L ++P +V+Y +
Sbjct: 596 TEPEV-FHMNLSSDAAYGVQKEPLTIIHPLLGCGDPYALTR---VLHEVEPRYVVLYDAE 651
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++FVRQ+E+Y+A P ++VYFL Y STE Q++ +R+E AFE LIR+K+ M+IP
Sbjct: 652 LTFVRQLEIYRASRPGKPMRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIP 710
>gi|378730855|gb|EHY57314.1| DNA excision repair protein ERCC-4 [Exophiala dermatitidis
NIH/UT8656]
Length = 949
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 217/752 (28%), Positives = 356/752 (47%), Gaps = 128/752 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L+F Q I L E LVIL+ GL L K++ ++L + +L+++ + + +++ I
Sbjct: 17 LQFQQEIYRLLRAE--DVLVILARGLGLLKIVTNLLHSYDAVGNSLVIIVGAEDRENEWI 74
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY +PL L T R +YS G I VT RIL+VDLL++ L
Sbjct: 75 GEALAEHYAMSRSPLAKGLRVINTDKATVAAREKIYSEGGIVSVTSRILVVDLLSKLLDP 134
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI RI + N+ +++AFSD P + S +A +M++L
Sbjct: 135 ETVTGLVVLHAERVVATSIEAFIVRIFREHNKIGFLKAFSDAPEPLASSYAPLASLMRTL 194
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V+V++ LE ++ V+++ VPM++ M IQ A+LE ++ + E++K N
Sbjct: 195 FLRKPSLWPRFHVSVAQSLESKKRADVIELEVPMTQAMQAIQNAVLECVEVSISELKKAN 254
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D T+++ L ++FD I+RRQLDP+WH + +TKQ+ +DL LR +L L+ YD V
Sbjct: 255 AGLEMDDWTLDSALHQNFDAIVRRQLDPVWHRVSWRTKQIANDLTVLRSILHSLLSYDCV 314
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ LKYLDT+ S S +S W+F +++ IF A+ RVY+
Sbjct: 315 SLLKYLDTVLASHSPPPGSTRQNQSPWLFLDAAATIFRSARDRVYK-------------- 360
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVV---LEEVLEEAPKWKVLREVLEEIEEERLK 400
GK +DGG + T + L VLEE PKW VL E+L+EIE +
Sbjct: 361 ---GKM-----------DDGGNNVLPTSKLPDSLAPVLEEQPKWAVLAEILQEIETDAYL 406
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLR 460
R ++ + VLV C D+ +C Q+++ ++ K + ++
Sbjct: 407 NPQLR--------DDSNQTVLVMCNDQRTCRQIKEYLQTMHVKPLPQDMN---------- 448
Query: 461 SVQTSSKKKKSKEPKGYGILDGVAPVKI---AQNAEASSVSKQEHDALLAAASKIRNQGK 517
DG AP ++ Q A + +++ L
Sbjct: 449 --------------------DGQAPHEVEEEEQKGSAEFMMRRKLREYLGWRKTFAQVSA 488
Query: 518 SDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNE 577
S +N ++ KG G G +R NSKA + + G G+
Sbjct: 489 SLFEENQKSLNDIKG---GAGTAASR---------------LNSKAPANKRRRVRGGGSS 530
Query: 578 G--PADEIHSGVVG-------YSGGMLETAFVEKEVQWK--------RSLKTDTAESKDS 620
G P I+ V +G + E E E K R D E D
Sbjct: 531 GFNPTRTINGAVAAVEDKDAQVAGLLAELRPTESEALQKDDVIVDDLRDAGEDMFELYDP 590
Query: 621 KPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYED 680
VH Y + D +L+ L+P I++Y P F+R++EVY++ + ++ YF++Y
Sbjct: 591 SDQVVVHPYDGDQDDQLLEELRPKYIIMYSPSADFIRRVEVYRSSHSDRNVRAYFMYYGG 650
Query: 681 STEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
S E Q++ + +RRE AF LI+++ M + +
Sbjct: 651 SVEEQRYLSAVRREKDAFTKLIKERGSMAVTL 682
>gi|156378394|ref|XP_001631128.1| predicted protein [Nematostella vectensis]
gi|156218162|gb|EDO39065.1| predicted protein [Nematostella vectensis]
Length = 899
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 158/408 (38%), Positives = 253/408 (62%), Gaps = 26/408 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + E+ +E GL I + GLS+ +++ S + ++ +++++SS + +I
Sbjct: 6 LLEYESAMFLEIQEE--DGLFITARGLSIHRVLTSFIKMYCDPAALVIVVNSSKYEEDRI 63
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+ L +LP IT + ++ R ++Y G + FVT RIL+VD+LT+R+P ++G+++
Sbjct: 64 VEELKSEGVMLPKVITTEYSSSERESIYLGGGVLFVTSRILVVDMLTKRIPVHLVSGMLV 123
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
L H + E+ E FI R+ + N+ +I+AFSD+PTA +SG+ K ER+MK+LF+RKL LW
Sbjct: 124 LKAHKIIESCQEAFILRLYRENNKTGFIKAFSDQPTAFMSGYCKVERVMKNLFVRKLSLW 183
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
PRF VS LER P VV++ + M+ M Q A+L+++D L+E+R+ N +D ++L+
Sbjct: 184 PRFHAGVSALLERHKPDVVELHLQMTSLMLANQTALLDLIDTSLRELRRANPSLDADELS 243
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
VEN + KSFD+ LR LDP+WH LG KTKQLV+DLK LR +L YL +YD VT+ K+L++L
Sbjct: 244 VENCIIKSFDKALRVLLDPVWHQLGVKTKQLVADLKVLRLILFYLTQYDCVTFYKFLESL 303
Query: 301 RVSE---SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R SE + +S+W+F +++ +F AK+RVY G N K ++ K
Sbjct: 304 RASEREVTRKSLWLFMDATDSLFVNAKERVY------GTSNNKPKAKKMKKDKEPKMSKA 357
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
+D E +LEE+PKWK+L ++L+EIEE+ K + R
Sbjct: 358 CDD--------------EPLLEESPKWKLLADILKEIEEDNEKNKNLR 391
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
++P +V+Y D+ FVRQ+EV+KA P I L+VYF+ Y S E QK+ +R+E AFE
Sbjct: 549 VEPKYVVLYDADIEFVRQLEVFKASRPGIPLRVYFMIYTGSVEEQKYLTTLRKEKEAFEK 608
Query: 701 LIRQKSFMMIPIDQ 714
LIR+K+ M+ P +Q
Sbjct: 609 LIREKASMVTPEEQ 622
>gi|154291595|ref|XP_001546379.1| hypothetical protein BC1G_15066 [Botryotinia fuckeliana B05.10]
Length = 822
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 217/731 (29%), Positives = 364/731 (49%), Gaps = 109/731 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
L++ Q I EL Q+ LV+L+ GL L +L+ ++L + + L++L + +
Sbjct: 17 LKYQQEIFQELRQKDE--LVVLARGLGLLRLVTNLLHSYDAAGNNLIILVGADDRENGWI 74
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L +AP A L T + R +Y+ G IF +T RIL+VDLLT L T
Sbjct: 75 GEALAEHAAISMAPRARGLSVVNTDLMSVGTREKMYAQGGIFSITSRILVVDLLTSLLNT 134
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GF+ +M++L
Sbjct: 135 ETITGVVVLHADKVVATSLEAFILRIYRQKNKVGFLKAFSDNPEPFATGFSPLSTMMRNL 194
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+R + +WPRF +NV++ LE ++ V+++ V MS M IQ AI+E ++ + E++K+N
Sbjct: 195 FLRNVSIWPRFHINVAQALEGKKKAEVIELEVSMSDSMRDIQNAIMECVEVSIGELKKSN 254
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D V++ L K FD ++RRQLDP+WH + KTKQ+V+DL LR +L L+ YDAV
Sbjct: 255 SGLEMDDWNVDSALHKQFDMVIRRQLDPVWHRVSWKTKQIVNDLTVLRGMLHSLLTYDAV 314
Query: 292 TYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ ++LD + + +S W+F ++++ +FD AK+RVY
Sbjct: 315 SFNRHLDMILAAHQPPAGSTRQNQSPWLFLDAAHTVFDTAKRRVY--------------- 359
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK + VD+ L+ VLEE PKW VL EVL+EI+ +
Sbjct: 360 --TGKATRPDDVDS----------------LKPVLEEQPKWSVLAEVLDEIDRDLYFNP- 400
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
V +D + +G +L+ C D C QL + L + R
Sbjct: 401 ----VPMD---DSNGTILIMCTDSAQCWQLRE-----------------YLQSMHARPET 436
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
T + + + +EP ++ + S + ++ A ++AA NQ + N
Sbjct: 437 TENDEDEEQEPSAEIMM---------RRKLRSYLEWKKKFAKISAALFNENQNALNGISN 487
Query: 524 PETYYG-SKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKP-EISGSGNEGPAD 581
+ S+G + R R G + S + + + S A EDKP E++ +E
Sbjct: 488 ANSVTNSSRGKAPANKRRRVRGGASS---SGSTRATNGSLQAAEDKPLEVAELMSEIKPT 544
Query: 582 EIHSGVVGYSGGMLETAFVEKEVQWKRSLKT--DTAESKDSKPVPPVHFYALESDQPILD 639
E+ + ++KE L D + + K + VH Y + D+ IL+
Sbjct: 545 EVEA--------------LQKEEVIADPLDDMEDYYQLYEMKDLVVVHAYDGDMDEHILE 590
Query: 640 ILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFE 699
+KP I++Y PD SFVR++EVY++ + ++VYFL+Y S E Q++ + RRE AF
Sbjct: 591 EVKPRYIIMYEPDTSFVRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSSTRREKDAFT 650
Query: 700 SLIRQKSFMMI 710
LI++K+ M +
Sbjct: 651 KLIKEKANMSV 661
>gi|400595560|gb|EJP63355.1| DNA repair protein [Beauveria bassiana ARSEF 2860]
Length = 940
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 206/734 (28%), Positives = 367/734 (50%), Gaps = 111/734 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL E LV+L+ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 16 LEYQQALFQELRSEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIVIVGAEDRENGWI 73
Query: 63 -HYLAPNAPLLPSE-------ITADLPA-NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + D + R +Y++G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISASPKARGLTVVNTDFQSVGAREKMYAAGGIFSITSRILVVDLLTALLSP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GLI+L+ + S E FI R+ + N+ +++AF+D P GF+ +M++L
Sbjct: 134 ETITGLIVLHADRIVATSLEAFILRVYRQKNKVGFLKAFADNPDPFTIGFSPLATMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRF V V++ LE ++ V+++ VPM++YM IQ AI+E ++ + E++K N
Sbjct: 194 FLKKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTEYMTDIQNAIMECVEISIHELKKGN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L K+FD I+RRQLDP WH + KTKQ+V+DL LR LL Y+V YDAV
Sbjct: 254 PGLEMDDWNLDSALLKNFDVIVRRQLDPDWHRVSWKTKQIVNDLTVLRGLLAYVVSYDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ +F+ A+KRVY +
Sbjct: 314 SFLQHLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTLFETARKRVYSAS------------ 361
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+K++ E+ D L VLEE PKW +L EVLEEI+ + +
Sbjct: 362 --------IKQISQEENIDS----------LRPVLEELPKWSLLAEVLEEIDRDLHFEPH 403
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDC--IRNGSEKVMREEWEKYLLSKVQLRS 461
+R++ +G +L+ C ++ C +RN + + ++ KV +
Sbjct: 404 ARDD--------SNGTILIM------CSNIDTCRQLRNYLQTM-------HVKPKV---T 439
Query: 462 VQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG 521
+TS + +P + + + + + + A++ A+ N +
Sbjct: 440 TKTSDDEDDPHKPSA---------IFMMRRRLRNYLRWKRQFAVVNASLFTENNKALNSA 490
Query: 522 DNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPAD 581
+ +G GR R R +++ S + +KP NE
Sbjct: 491 TDSRPGHGGMRGGRAPSNKRRRQRGGGNMAVGMSRAENGSISQFFEKP------NE---- 540
Query: 582 EIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHFYALESD 634
+ M E E+E + K + D ++ D + + +H Y + D
Sbjct: 541 --------VAELMAEVQITEEEAKQKDEVIADPLDNMEDYYQLYDMQDLVVIHAYDGDQD 592
Query: 635 QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRE 694
+ +L+ ++P I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q++ A +RRE
Sbjct: 593 EHVLEEVRPRYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLASVRRE 652
Query: 695 NGAFESLIRQKSFM 708
AF LI++++ M
Sbjct: 653 KDAFTRLIKERASM 666
>gi|440634618|gb|ELR04537.1| hypothetical protein GMDG_06828 [Geomyces destructans 20631-21]
Length = 936
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 219/733 (29%), Positives = 363/733 (49%), Gaps = 107/733 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q I EL E L+IL+ G L +++ ++L + + L+L+ + + ++ I
Sbjct: 18 LEYQQEIFNELRTEDE--LLILARGCGLLRIVTNLLHSYDAAGNNLVLIVGAEDRENGWI 75
Query: 63 -HYLAPNAPLLPSE-------ITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + DL R +Y++G IF +T RIL+VDLLT L
Sbjct: 76 GEALAEHAAISGSSKARGLSVVNTDLMNVGTRERMYANGGIFSITSRILVVDLLTSLLAP 135
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I+L+ + STE FI RI + N++ +++AFSD P A GFA +M++L
Sbjct: 136 DTITGIIVLHADRVVATSTEAFILRIYRQQNKDGFLKAFSDNPEAFTVGFAPLATMMRNL 195
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK WPR+Q + L+ ++ V+++ VPM+ M IQ AI+E ++A + E++K N
Sbjct: 196 FLRKASFWPRYQATIQRSLQGKKKAEVIELEVPMTDAMRDIQNAIMECVEASIGELKKGN 255
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+ +ED V+ + K+FD ++RRQL+P+WH + KTKQ+VSDL LR LLD L+ YDAV
Sbjct: 256 SGLAMEDWNVDRAIHKAFDAMVRRQLNPVWHRVSWKTKQIVSDLTVLRGLLDALLTYDAV 315
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L+YLDT+ S S W+F +++ IFD AK+RVY
Sbjct: 316 SFLRYLDTVVAVHSPPPGSTRQNVSPWLFLGAAHTIFDTAKRRVY--------------- 360
Query: 344 SVTGK-KRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
TGK RK +++T+ + L VLEE PKW L E LEEI+ +
Sbjct: 361 --TGKLDRK------------SSANTNLEGSLRPVLEEQPKWGQLAETLEEIDRDLYFNT 406
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV 462
R++ +G +L+ C D + Q+++ YL Q+ V
Sbjct: 407 LIRDD--------SNGTILIMCADTATSRQIKE----------------YL----QIMHV 438
Query: 463 QTSSKKKKSK---EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSD 519
QT + +P ++ + E + +S +L K ++
Sbjct: 439 QTEDQTDDGDSEPKPSAAHMMRSKLRDYLRWKPEFAKISS----SLFGENQKSLSEAGGG 494
Query: 520 DGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKP-EISGSGNE- 577
G P ++ G P + R R R G + + ++++ + N + EDKP E++ +E
Sbjct: 495 IG-GPSSFRGKPPPNKRR---RIRGGRSNI-STSHRGADGNVQIG-EDKPSEVATLLSEI 548
Query: 578 GPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPI 637
P D E+ + + + D E D + VH Y + D+ +
Sbjct: 549 RPTDA-------------ESMQKAEPIVDPLDVTEDFFELFDMDELIVVHAYDGDMDEHL 595
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L+ +KP I++Y P+ +F+R++EVY++ + ++ Y++ Y S E Q+F IRRE A
Sbjct: 596 LEEVKPRYIIMYEPEPTFIRRVEVYRSSHNDRNVRSYYMCYGGSVEEQRFLTAIRREKDA 655
Query: 698 FESLIRQKSFMMI 710
F LI++K+ M I
Sbjct: 656 FTRLIKEKANMSI 668
>gi|156056488|ref|XP_001594168.1| hypothetical protein SS1G_05598 [Sclerotinia sclerotiorum 1980]
gi|154703380|gb|EDO03119.1| hypothetical protein SS1G_05598 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 929
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 217/731 (29%), Positives = 364/731 (49%), Gaps = 109/731 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
L++ Q I EL Q+ LV+L+ GL L +L+ ++L + + L+LL + +
Sbjct: 17 LKYQQEIFQELRQKDE--LVVLARGLGLLRLVTNLLHSYDAAGNNLILLIGADDRENGWI 74
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L +AP A L T + R +Y+ G IF +T RIL+VDLLT L
Sbjct: 75 GEALAEHAAISMAPKARGLSVVNTDLMSVGTREKMYAQGGIFSITSRILVVDLLTNLLDP 134
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GFA +M++L
Sbjct: 135 ETITGVVVLHADKVVATSLEAFILRIYRQKNKAGFLKAFSDNPEPFATGFAPLSTMMRNL 194
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+R + +WPRF +NV++ LE ++ V+++ V MS M IQ AI+E ++ + E++K+N
Sbjct: 195 FLRNVSIWPRFHINVAQALEGKKKAEVIELEVSMSDSMRDIQNAIMECVEVSIGELKKSN 254
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D++D V++ L K FD ++RRQLDP+WH + KTKQ+V+DL LR +L L+ YDAV
Sbjct: 255 SGLDMDDWNVDSALHKQFDMVIRRQLDPVWHRVSWKTKQIVNDLTVLRGMLHSLLTYDAV 314
Query: 292 TYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ ++LD + + +S W+F ++++ +FD AK+RVY
Sbjct: 315 SFNRHLDMILAAHQPPAGSTRQNQSPWLFLDAAHTVFDTAKRRVY--------------- 359
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK + + VD+ L+ VLEE PKW VL EVL+EI+ +
Sbjct: 360 --TGKAARTEDVDS----------------LKPVLEEQPKWAVLAEVLDEIDRDLYFNP- 400
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
V +D + +G +L+ C D C QL + +++ R + ++ L + Q S +
Sbjct: 401 ----VPVD---DSNGTILIMCTDSAQCWQLREYLQSMH---ARPDTDEDNLDREQEPSAE 450
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
++K S + ++ A ++AA NQ N
Sbjct: 451 IMMRRKLR-----------------------SYLEWKKKFAKISAALFNENQNALSGASN 487
Query: 524 PETYY-GSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKP-EISGSGNEGPAD 581
+ S+G + R R G + S + + + S A EDKP E++ +E
Sbjct: 488 TNSITNNSRGRAPANKRRRVRGGASS---SGSTRATNGSLQAAEDKPLEVAELMSEIKPT 544
Query: 582 EIHSGVVGYSGGMLETAFVEKEVQWKRSLKT--DTAESKDSKPVPPVHFYALESDQPILD 639
E+ + ++KE L D + + K + H Y + D+ IL+
Sbjct: 545 EVEA--------------LQKEEVIADPLDDMEDYYQLYEMKDLVVAHAYDGDMDEHILE 590
Query: 640 ILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFE 699
+KP I++Y P+ SFVR++EVY++ + ++VYFL+Y S E Q++ + RRE AF
Sbjct: 591 EVKPRYIIMYEPETSFVRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSSTRREKDAFT 650
Query: 700 SLIRQKSFMMI 710
LI++K+ M +
Sbjct: 651 KLIKEKANMSV 661
>gi|395515087|ref|XP_003761738.1| PREDICTED: DNA repair endonuclease XPF [Sarcophilus harrisii]
Length = 896
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 264/455 (58%), Gaps = 37/455 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL+ GLV+ + GL +L+ + LH +L+L++ P +
Sbjct: 4 LLEYERQLVLELLE--TDGLVVCARGLGADRLLYHFVRLHCHPGCLVLVLNTQPAEEEYF 61
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L + LP +T ++ + R+ +Y+ G + FVT RIL+VD LT R+P+ + G++
Sbjct: 62 INQLKLEDVEHLPRRVTNEIASGSRYEVYTQGGVLFVTSRILVVDFLTDRIPSDLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + ++ E FI R+ + N+ +I+AFSD A +GF ER+M++LF+RKL+L
Sbjct: 122 VYKAHRIIDSCQEAFILRLFRQKNKNGFIKAFSDNAIAFDTGFCHVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 182 WPRFHVAVNSFLEQHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKCYNPSLEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + +N + K+
Sbjct: 302 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHIP---DIRMNKKC-----------KMT 347
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
D++G ++ E VLE PKW+ L EVL+EIE E ++ E L
Sbjct: 348 EKTDQEG------QELKRELVLESNPKWEALTEVLKEIEIE-----NNNSEAL-----GG 391
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL + + G++ + + + K
Sbjct: 392 PGKVLICASDDRTCAQLREYLTIGAKTFLLKLYTK 426
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 610 LKTDTAESKDSKPVPPVHF-------YALESDQPILDILKPFVIVVYHPDMSFVRQIEVY 662
L +D A +P+ +H YAL +L ++P +V+Y +++FVRQ+E+Y
Sbjct: 518 LSSDAAYGILKEPLTVIHPLLGCGDPYALTR---VLHEVEPRYVVLYDAELTFVRQLEIY 574
Query: 663 KAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
+A P ++VYFL Y STE Q++ +R+E AFE LIR+K+ M+IP
Sbjct: 575 RASRPGKPMRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIP 623
>gi|440896817|gb|ELR48644.1| DNA repair endonuclease XPF [Bos grunniens mutus]
Length = 917
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 267/459 (58%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ ++R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITGSNRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERAMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLELHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K R +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHVPDA----------KMSKKSRLPEKLE 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ TK L VLE PKW L EVL+EIE A ++E +L G
Sbjct: 363 IKEEQE-------TKKDL--VLESNPKWAALTEVLKEIE------AENKESEVLGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + + G+E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLREYLTVGAEVFLLRLYRKTFEK 442
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK-VYFLFYEDSTEVQKFKAGIRREN 695
+L ++P +V+Y +++FVRQ+E+Y+A P L+ VYFL Y STE Q++ +R+E
Sbjct: 569 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRQVYFLIYGGSTEEQRYLTALRKEK 628
Query: 696 GAFESLIRQKSFMMIP 711
AFE LIR+K+ M+IP
Sbjct: 629 EAFEKLIREKASMVIP 644
>gi|70984637|ref|XP_747825.1| DNA repair protein RAD1 [Aspergillus fumigatus Af293]
gi|66845452|gb|EAL85787.1| DNA repair protein RAD1, putative [Aspergillus fumigatus Af293]
gi|159122608|gb|EDP47729.1| DNA repair protein RAD1, putative [Aspergillus fumigatus A1163]
Length = 975
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 321/645 (49%), Gaps = 93/645 (14%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y+ G I VT RIL+VDLL++ L + G+++L+ + STE FI RI + +N
Sbjct: 105 REKIYAQGGILSVTSRILVVDLLSKLLDPEKITGMVVLHADRIVATSTEAFIIRIYRQIN 164
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P +GFA M++LF+RK LWPRF V V+E LE V+++
Sbjct: 165 KSGFLKAFSDSPEPFTTGFAPLANYMRNLFLRKTSLWPRFHVTVAESLEGHRKAEVIELE 224
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPM+ M IQ A+LE ++ + E++K N +D+ D T+++ L +SFD +RRQLDP+WH
Sbjct: 225 VPMTDKMREIQNAVLECVEISIAELKKANTGLDMADWTLDSALHRSFDIAIRRQLDPMWH 284
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAE 314
+ +T+Q+VSDL LR +L L+ YDAV+++KYLDT+ + S S W+F +
Sbjct: 285 RVSFRTRQIVSDLSDLRAILHALLTYDAVSFVKYLDTIVTAHSPPPGSTRHNYSPWLFLD 344
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
+++ +F AK RVY GK + D + ST L
Sbjct: 345 AAHVLFQTAKSRVYE-----------------GKITR----------DAANTLDST---L 374
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
+ VLEE PKW VL EVLEEIE Q + V DG + VL+ C D+ +C Q+
Sbjct: 375 QPVLEEQPKWAVLAEVLEEIE-----QDAYLNPVSTDGS---NSTVLIMCTDQRTCRQIR 426
Query: 435 DCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEA 494
+ L ++ K K+++P G LD ++ K +
Sbjct: 427 EY----------------------LGTMHARIGKDKAEDP---GDLDAMSEKKFSAEVML 461
Query: 495 SSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGP------GRGRGKGRNR-NGPA 547
++ D + A+ RN + GD+ + G + P GR R R G
Sbjct: 462 RRRLREYLDWKTSLANVNRNLS-AKSGDDTQNAKGQESPKPTSQQGRAPPNKRRRVRGGG 520
Query: 548 CVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWK 607
V +A + ++ + E ++S E +I G ++ + E
Sbjct: 521 TVTSAAARVPNASVQTDTELPGQVSSLLEELQPTDIEE---TQKGEIISDDLEDME---- 573
Query: 608 RSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENP 667
D E D + VH Y + D+ IL+ ++P I++Y PD +F+R++EVY++ +
Sbjct: 574 -----DFFELYDMDDLVIVHPYDGDMDEHILEEVRPRYIIMYEPDAAFIRRVEVYRSSHV 628
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
++VYF++Y S E Q++ + +RRE +F LI++K M + +
Sbjct: 629 GRNVRVYFIYYGGSVEEQRYLSAVRREKDSFTKLIKEKGSMAVTL 673
>gi|119467270|ref|XP_001257441.1| DNA repair protein RAD1, putative [Neosartorya fischeri NRRL 181]
gi|119405593|gb|EAW15544.1| DNA repair protein RAD1, putative [Neosartorya fischeri NRRL 181]
Length = 975
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 195/638 (30%), Positives = 322/638 (50%), Gaps = 79/638 (12%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y+ G I VT RIL+VDLL++ L + G+++L+ + STE FI RI + +N
Sbjct: 105 REKIYAQGGILSVTSRILVVDLLSKLLDPEKITGMVVLHADRIVATSTEAFIIRIYRQIN 164
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P +GFA M++LF+RK LWPRF V V+E LE V+++
Sbjct: 165 KSGFLKAFSDSPEPFTTGFAPLANYMRNLFLRKTSLWPRFHVTVAESLEGHRKAEVIELE 224
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPM+ M IQ A+LE ++ + E++K N +D+ D T+++ L +SFD +RRQLDP+WH
Sbjct: 225 VPMTDKMREIQNAVLECVEISIAELKKANTGLDMADWTLDSALHRSFDIAIRRQLDPMWH 284
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAE 314
+ +T+Q+VSDL LR +L L+ YDAV+++KYLDT+ + S S W+F +
Sbjct: 285 RVSFRTRQIVSDLSDLRSILHALLTYDAVSFVKYLDTIVTAHSPPPGSTRHNYSPWLFLD 344
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
+++ +F AK RVY GK + D + ST L
Sbjct: 345 AAHVLFQTAKSRVYE-----------------GKITR----------DAANTLDST---L 374
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
VLEE PKW VL EVLEEIE++ S +E + VL+ C D+ +C Q+
Sbjct: 375 RPVLEEQPKWAVLAEVLEEIEQDAYLNPVSTDE--------SNSTVLIMCTDQRTCRQIR 426
Query: 435 DCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEA 494
+ + ++ +++ E L + S+KK S E + ++ + +
Sbjct: 427 EYLGTMHARIGKDKAE-------DLEDLDAMSEKKFSAE--------VMLRRRLREYLDW 471
Query: 495 SSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSAN 554
+ + L A +S K + P + G P + R R R G A V +A
Sbjct: 472 KTSLANVNRNLSAKSSDDTQNAKGQESPKPTSQQGRAPPNKRR---RVRGGGA-VTSAAA 527
Query: 555 KDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDT 614
+ ++ + E ++S E +I G ++ + E D
Sbjct: 528 RVPNASVQTDTELPGQVSSLLEELQPTDIEET---QKGEIINDDLEDME---------DF 575
Query: 615 AESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVY 674
E D + VH Y + D+ IL+ ++P I++Y PD +F+R++EVY++ + + ++VY
Sbjct: 576 FELYDMDDLVIVHPYDGDMDEHILEEVRPRYIIMYEPDPAFIRRVEVYRSSHVARNVRVY 635
Query: 675 FLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
F++Y S E Q++ + +RRE +F LI++K M + +
Sbjct: 636 FIYYGGSVEEQRYLSAVRREKDSFTKLIKEKGSMAVTL 673
>gi|403274034|ref|XP_003928795.1| PREDICTED: DNA repair endonuclease XPF [Saimiri boliviensis
boliviensis]
Length = 916
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 263/459 (57%), Gaps = 40/459 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQSAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ + R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSTSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDA----------KISKKGKISEKME 362
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 363 IKEGQETKK---------ELVLESNPKWEALTEVLKEIE------AENQESEALGGP--- 404
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G E ++ R+ +EK
Sbjct: 405 -GQVLICASDDRTCSQLRDYLTLGVEAFLLRLYRKTFEK 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 570 EISGSGNEGPADEIHSGVVGYSGGMLETAFVE-KEVQWKRSLKTDTAESKDSKPVPPVHF 628
E G EG EI S ET E K ++ +L +D +P+ +H
Sbjct: 505 EEEGDVQEGCRQEISSSP--------ETCLAEIKHEEFDVNLSSDAVYGILKEPLTIIHP 556
Query: 629 YALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEV 684
SD +L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE
Sbjct: 557 LLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEE 616
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIP 711
Q++ +R+E AFE LIR+K+ M++P
Sbjct: 617 QRYLTALRKEKEAFEKLIREKASMVVP 643
>gi|291223405|ref|XP_002731700.1| PREDICTED: Ercc4 protein-like [Saccoglossus kowalevskii]
Length = 846
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 238/390 (61%), Gaps = 43/390 (11%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP +IT + AN R ++Y G + FVT RIL++DLLT +LPT + G+++ H + E+
Sbjct: 46 LPKQITNEYSANDRTSVYLEGGVLFVTSRILVMDLLTDKLPTHLVTGILVYKAHRIIESC 105
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI R+ + N+ +I+AFSD+P SGF K ER+MK+LF+RKL+LWPRF V+V
Sbjct: 106 QEAFILRLYRQKNKTGFIKAFSDQPQCFASGFCKLERVMKNLFVRKLYLWPRFHVDVKAC 165
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFK-SF 249
+++ P V+++ +PM+ M IQ +IL++M+A +KE+++ N +D++DLTVEN L K S
Sbjct: 166 MDKHKPEVIELGIPMTGSMKSIQSSILDIMNAVVKEIKQCNPSMDIDDLTVENSLAKQSL 225
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES---F 306
++I+R QLDP+W+ LG KTKQLVSDLK LR LL YL +YD VT+ K+L TLR SE+
Sbjct: 226 EQIIRLQLDPVWYQLGSKTKQLVSDLKLLRALLFYLTQYDCVTFYKFLQTLRSSETRLIH 285
Query: 307 RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTS 366
S W+F ES+ +F +AK RVY ++ + N S V
Sbjct: 286 NSGWLFLESADSMFSHAKDRVYGSSKKTKNKKNDASTEVQ-------------------- 325
Query: 367 STSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKD 426
+ LEE+PKWK L E+LEEIE E K+ S+ + G V++ D
Sbjct: 326 --------DVSLEESPKWKTLSEILEEIETEN-KEDSAGLGI---------GRVMIVAHD 367
Query: 427 ECSCMQLEDCIRNGSEKVMREEWEKYLLSK 456
+ +C QL D +++G++ V+ + ++ L S+
Sbjct: 368 DRTCCQLRDYLKDGAKPVLMDLCQRALHSE 397
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
L+P +++Y D+ VRQ+EVYKA P L+VYFL Y STE Q++ +R+E+ AFE
Sbjct: 495 LQPRYVILYDADIQLVRQLEVYKACRPGEPLRVYFLVYSGSTEEQQYLTSLRKESNAFEH 554
Query: 701 LIRQKSFMMIPID 713
LI++K+ ++IP D
Sbjct: 555 LIKEKATLVIPED 567
>gi|405950197|gb|EKC18198.1| DNA repair endonuclease XPF [Crassostrea gigas]
Length = 869
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 272/462 (58%), Gaps = 47/462 (10%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I + E GL++++ GL + ++ + L ++ +L+L+++ +
Sbjct: 4 LLEYESQIFLDAFHE--DGLLVMAKGLGIDRIFVNFLKVYCDPANLVLVLNTNAKEEEYF 61
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L N LP IT ++ AN R +Y G + F+T RIL+VD LT+R+P +++G++
Sbjct: 62 TEQLDKENIKPLPRTITNEVGANERQKVYLQGGVLFLTSRILVVDFLTERVPVEHISGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AFSD P A +G++ ER MK+LF+R L+L
Sbjct: 122 VYKAHRIEESCQEAFILRLYRQKNKTGFIKAFSDSPYAFTTGYSHVERTMKNLFVRNLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK-TNKVDVEDL 239
WPR+ +V LE+ VV+++V ++ Q A+L++++AC++E+++ T +D E++
Sbjct: 182 WPRYHASVVANLEQHKVDVVEIQVQLTSATLACQTALLDLINACIQELKRCTTAIDAEEV 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+FD+I+R QLDP+WH L KT+QLVSDLKTLR +L ++ +YD+VT+ +++
Sbjct: 242 TVENAIGKAFDKIIRFQLDPVWHQLSSKTRQLVSDLKTLRLILRHMTQYDSVTFFSMVNS 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
++ +E +F + W+F +++ +F +AK+RVY G E K + VD
Sbjct: 302 VKTNEKAFGQNTGWLFLDAADSLFVHAKERVY------GPE-------------KTRGVD 342
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
++E+ E VLEE+PKW+ LR++L+EI++E G E +
Sbjct: 343 KQKNEEK-----------EPVLEESPKWEALRDILKEIKKENKNL----------GTEEE 381
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQ 458
G VL+A +D+ +C QL++ + +G +M + K+L K Q
Sbjct: 382 PGTVLIAAEDDRTCSQLKEMLCDGPRSMMIRMFNKFLAQKGQ 423
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L ++P +V+Y DM FVR++EVY+A P L+VYF+ Y S E Q++ +R E A
Sbjct: 513 LQEVQPRYVVLYDVDMQFVRELEVYRASRPRSPLRVYFMMYTGSVEEQRYLTTLRMEKEA 572
Query: 698 FESLIRQKSFMMIP 711
FE LI++K+ M+IP
Sbjct: 573 FEYLIKEKATMVIP 586
>gi|346976325|gb|EGY19777.1| DNA repair protein rad16 [Verticillium dahliae VdLs.17]
Length = 955
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 208/739 (28%), Positives = 358/739 (48%), Gaps = 102/739 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL + LV+++ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 15 LEYQQTLFQELRSDDE--LVVMAKGLGLMRLVTNLLHSYDAAGNNLIIIVGAEDRENAWI 72
Query: 63 -HYLAPNAPLLPSE-------ITADLPA-NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + DL + R +Y+ G IF +T RILIVDLLT L
Sbjct: 73 GEALAEHAAISMSPKARGLTVVNTDLTSVGAREKMYARGGIFSITSRILIVDLLTSLLNP 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI RI + NR +++AFSD P +GF+ +M++L
Sbjct: 133 ETVTGLVVLHADRVVATSLEAFILRIYRQKNRAGFLKAFSDNPDPFATGFSPLSTMMRNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRF V V+E LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 193 FLKKASLWPRFHVTVAESLEGKKKAEVIELEVPMTDAMKDIQNAIMECVEVSIHELKKGN 252
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L K+FD ++RRQL+P WH + KT+Q+V DL LR +L ++ +DAV
Sbjct: 253 TGLEMDDWNLDSALLKNFDVMVRRQLEPNWHRVSWKTRQIVHDLSVLRGILHSVLSFDAV 312
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ IF+ A+KRVY +
Sbjct: 313 SFLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQTIFETARKRVYAASPRAANA------ 366
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ + L VLEE PKW L EVL+EI+ +
Sbjct: 367 ---------------------AGAGADIDALRPVLEELPKWAQLAEVLDEIDRALYFEPP 405
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
R++ G +L+ C D +C QL D ++ V+ R Q
Sbjct: 406 VRDD--------SSGSILIMCSDASTCKQLRDYVQT---------------MHVKPRVDQ 442
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGK----SD 519
T++ + +G + + A + ++ + L R K +
Sbjct: 443 TTTAAAAASGAAEDEEENGGSGNDGLDVSGAFMMRRKLRNYLKWKGEFARVSAKLFSENQ 502
Query: 520 DGDNPETYYGSKGPGRGRG---KGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGN 576
N T S P RG+ K R G + +A +++ S AA +KP
Sbjct: 503 KALNGATDARSGQPLRGKAPANKRRRVRGGGALGGNAYGRTENGSVAAFFEKP------- 555
Query: 577 EGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFY 629
S V + T E+E Q K + D E D + + +H Y
Sbjct: 556 --------SDVADLIAEVQMT--TEEEAQQKADVVADPLEDMDDYYQLYEMQDLVVIHAY 605
Query: 630 ALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKA 689
+ D+ +L+ +KP I++Y PD SF+R++EVY++ + ++VYF++Y S E Q++ +
Sbjct: 606 DGDQDEHVLEEVKPRYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQRYLS 665
Query: 690 GIRRENGAFESLIRQKSFM 708
G+RRE AF +I++++ M
Sbjct: 666 GVRREKDAFTKVIKERASM 684
>gi|330944954|ref|XP_003306466.1| hypothetical protein PTT_19608 [Pyrenophora teres f. teres 0-1]
gi|311316030|gb|EFQ85442.1| hypothetical protein PTT_19608 [Pyrenophora teres f. teres 0-1]
Length = 1046
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 226/741 (30%), Positives = 365/741 (49%), Gaps = 114/741 (15%)
Query: 4 EFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII- 62
EF Q I +L +E LVIL+ GL L +L+ ++L + + L+LL + + ++ +
Sbjct: 112 EFQQDIFNQLREEDE--LVILARGLGLLRLVTNLLHSYDAAGNNLILLVGADDRENVWVG 169
Query: 63 -----HYLAPNAPLLP--SEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
H NAP S + DL R LY+ G IF +T RILIVD L+ L
Sbjct: 170 EALAEHAAVSNAPKCRGLSLVNTDLMSVGTREKLYAQGGIFSITSRILIVDFLSGLLNPE 229
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
+ G+++L+ + S E FI RI + N+ +++AFSD P +GF+ +MK+LF
Sbjct: 230 TVTGIVVLHAERVVATSLEAFILRIYRQKNKTGFLKAFSDTPEPFTTGFSPLTNMMKNLF 289
Query: 175 IRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
+ K L+PRF V V+ LE R+ V+++ VPM++ M IQ A+L ++A + E++K N
Sbjct: 290 LTKPALYPRFHVAVANSLEGRKKAEVIELEVPMTEAMQDIQNAVLACVEASIGELKKANP 349
Query: 234 -VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
++VED TV++ L K+FD+I+RRQLDP+WH KT+Q+V DL LR +L L+ YDAV
Sbjct: 350 GLEVEDWTVDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLRTILHALLTYDAVN 409
Query: 293 YLKYLDTLRV--------SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKS 344
++KYLDT+ ++ +S W+F +++ IF AK+RVY
Sbjct: 410 FVKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIFTTAKRRVY---------------- 453
Query: 345 VTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASS 404
TG K+ N E +S + L VLEE PKW L E+L+EIE++ +
Sbjct: 454 -TG------KLSNAE---LANASNAVPESLHPVLEEFPKWTQLAEILQEIEQDAYFNPTP 503
Query: 405 REEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN---GSEKVMREEWEKY-----LLSK 456
+++ +G +L+ C D+ + QL + ++ E V EE E Y + +
Sbjct: 504 --------QDSSNGSILIMCGDQGTASQLREYLQTMYVKPEGVADEEEEGYEPSGKFMMR 555
Query: 457 VQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQG 516
+LR+ T K+ SK + ++N +A + S ++ A S +R
Sbjct: 556 RKLRNYLT-WKRDFSK----------FSAALFSENQKAINTSTDKN-----AQSGMRQTS 599
Query: 517 KSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGN 576
G P G G +R V + ++D+ S A + EI +
Sbjct: 600 ----GRPPPNKRRRVRGGGNAAAGPSRTDAGAVRTAGDRDAHIASLMAELEPTEIEAAQK 655
Query: 577 EGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK----DSKPVPPVHFYALE 632
G VG+ D ES D + VH Y+ +
Sbjct: 656 PGE--------VGFD-------------------PLDNMESYYELFDMNSLIVVHPYSGD 688
Query: 633 SDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIR 692
D+ ILD KP +V+Y PD +F+R+IEVY++ + +KV+F++Y S E Q++ + +R
Sbjct: 689 LDEHILDETKPRYVVMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQRYLSAVR 748
Query: 693 RENGAFESLIRQKSFMMIPID 713
RE AF LI++++ M + ++
Sbjct: 749 REKDAFTRLIKERANMALTMN 769
>gi|409076721|gb|EKM77091.1| hypothetical protein AGABI1DRAFT_122321 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 991
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 195/747 (26%), Positives = 376/747 (50%), Gaps = 81/747 (10%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ E+ L+IL+ GL L ++I +++ ++ ++ +LL++++ +S I
Sbjct: 4 LLPFHKSILEEIHDPATSDLLILARGLGLRRIICTLMKIYDSNKNLILLVNATQEEESAI 63
Query: 62 IHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P I + + R LY G + VT RIL+VD+L +P + G+
Sbjct: 64 GEELGIMGCRRPGLRVIGYETSSKDRQNLYKQGGLMSVTSRILVVDMLQNDIPVHLITGM 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
+IL+ +T E FI R+ + NR+ +++AF+D+P + SG + + +MK L +R+ H
Sbjct: 124 LILHAERVTPTVIEAFIVRLFREKNRDGFVKAFTDQPEHITSGMSPLKNVMKELQLRRAH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
L+PRF ++++ LER VV++ P+S+ M I AI++ + L E++++NK ++++D
Sbjct: 184 LYPRFHEHINKTLERRRADVVELSQPLSQSMSEIHHAIIQCISTTLAELKRSNKELELDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
VEN F+SF+ I+R +L P+WH +G KTKQL++DL LR+LL YL+ YDA+++ YL+
Sbjct: 244 FNVENTYFRSFEGIVRSRLSPVWHKVGPKTKQLINDLNVLRQLLFYLLSYDALSFHAYLE 303
Query: 299 TLRVSESF----------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
T+ S + +S W+ +++ IF+ AK+R + + + +VT +
Sbjct: 304 TIIESNTISTRTGGPKVHQSPWLLTDAANIIFEVAKRRCFIISSIP------KETAVTHQ 357
Query: 349 KRKLKKVDN----NEDEDGGTSSTSTKVV----------LEEVLEEAPKWKVLREVLEEI 394
++ D +E E GT++ + + ++ VLEE PKW +L E+L EI
Sbjct: 358 PMEVDDQDAWDLLDELEQPGTNNQGKRKLHERPAWLPKNIQPVLEEQPKWDLLSEILLEI 417
Query: 395 EEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLL 454
E E + +S++ + + VL+ SC ++D + + + W+ ++
Sbjct: 418 ESEIIHLSSNK-----NTSQRGTDTVLIMTSSTRSCDLIQDFL-DTMDPDAESGWKGRVM 471
Query: 455 SKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRN 514
+ +L+ + + + AP A +A +S +E + L+ A K ++
Sbjct: 472 MRRRLKGYLGWRGRLNPNDNNNF------APTNQAGSAGMTSRKGKEREDNLSEALKKKD 525
Query: 515 QGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGS 574
+ K + + ++G G GR+ P+ + D + +D P+++ +
Sbjct: 526 REKMEKS---ASRRRTRGGAPSTGGGRSATSDKASPEVIDVDKPDDMTLWSKDDPDLAAT 582
Query: 575 ----GNEGPADEIHSGVVGYSGGML---ETAFVEKEVQWKRSLKTDTAESKDSKPVPPVH 627
N+ D + S G+L +T + R+ DT
Sbjct: 583 LMNASNDFALDLLTQDEFESSYGLLPPEQTIVI-------RACSDDT------------- 622
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
D +L ++P IV++ P + F+R++EVY++ P + ++VY + Y DS E ++
Sbjct: 623 ------DDRMLAEIQPRFIVMFEPSVEFIRRVEVYRSSYPGMAVRVYHMVYADSCEEHRY 676
Query: 688 KAGIRRENGAFESLIRQKSFMMIPIDQ 714
A IR+E +FE L++++ M++ +++
Sbjct: 677 LAAIRKEKESFERLVKERGSMLLTLEE 703
>gi|296823836|ref|XP_002850507.1| DNA repair protein rad16 [Arthroderma otae CBS 113480]
gi|238838061|gb|EEQ27723.1| DNA repair protein rad16 [Arthroderma otae CBS 113480]
Length = 971
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 223/762 (29%), Positives = 368/762 (48%), Gaps = 159/762 (20%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q+++ EL E LVIL+ GL L ++I ++L + + L+LL + + +++ I
Sbjct: 16 LQYQQNLLNELRSEDE--LVILAQGLGLLRIITNLLHTYDAAGNNLILLVGATDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY +PL L T + RH LYS G I VT RIL+VDLL++ L +
Sbjct: 74 GEALAEHYAVNKSPLARGLKVINTDRATVSMRHKLYSEGGIISVTSRILVVDLLSRLLDS 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I+L+ K N++ ++AFSD P +GFA ++++L
Sbjct: 134 KLITGIIVLHAE---------------KQFNKDGMLKAFSDTPEPFTTGFAPLSNMLRNL 178
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE V+++ VPM+ M IQ A+LE ++ ++E+++ N
Sbjct: 179 FLQKTSLWPRFQVTVAESLEGHRKAEVIELEVPMTDKMREIQNAVLECVEVNIRELKRAN 238
Query: 233 K-VDV-EDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
+D+ +D TV++ L ++FD +RRQLDP+WH + +T+Q+VSDL LR +L L+ +DA
Sbjct: 239 TGLDLGDDWTVDSALHRNFDVAIRRQLDPVWHRVSFRTRQIVSDLTVLRSILHSLLTFDA 298
Query: 291 VTYLKYLDTLRVSESF--------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V+ KYLDT+ + S S W+F ++++ +F+ AK RVYR
Sbjct: 299 VSLNKYLDTVISAHSAPAGSTKQNYSPWLFLDAAHVLFESAKSRVYR------------- 345
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
KK +K+ ++ D G +E +LEE PKW VL EVLEEIE +
Sbjct: 346 -----KKTPVKENASSSDIFNG---------IEPILEEQPKWAVLAEVLEEIERDTYLNP 391
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQL--------------------------EDC 436
S+ G N+ +L+ C D+ +C Q+ ED
Sbjct: 392 SA------PGSSNN--AILIMCGDQQTCRQIREYLSTMHCRDKSQDENEGNEEGVTHEDD 443
Query: 437 IRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASS 496
+ + +MR ++ YL K L +V K PKG I G P + ++ A
Sbjct: 444 HKPSAGAMMRRKFRDYLFWKRNLSNVNDHLYGVK---PKGKSI--GEVPGYTSMSSAA-- 496
Query: 497 VSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKD 556
+T+ G +GP R + R G + +A
Sbjct: 497 ----------------------------QTHTG-RGPPNKRRRVR---GGSSAASTAGAR 524
Query: 557 SKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTA- 615
++ ++ +G +E P S ++ A +E EVQ +L+ D
Sbjct: 525 RQAQGSVQVD-----TGEFSEAPT---------LSEEAIQQAILE-EVQ-HITLEDDLED 568
Query: 616 -----ESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIK 670
E D + VH Y + D+ +L+ L+P I++Y PD +F+R++EVY++ +
Sbjct: 569 MDKYYELYDVNDLLVVHHYDGDMDEHVLEELRPRYIIMYEPDAAFIRRVEVYRSSHQDRN 628
Query: 671 LKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
++VYF++Y +S E Q++ + +RRE AF LI +K M + +
Sbjct: 629 VRVYFMYYGESVEEQRYLSAVRREKDAFTKLIHEKGTMALKL 670
>gi|380796517|gb|AFE70134.1| DNA repair endonuclease XPF, partial [Macaca mulatta]
Length = 881
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/436 (37%), Positives = 252/436 (57%), Gaps = 38/436 (8%)
Query: 25 SSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLA-PNAPLLPSEITADLPAN 83
+ GL +L+ L LH +L+L++ P + I+ L LP +T ++ +N
Sbjct: 1 ARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSN 60
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R+ +Y+ G + F T RIL+VD LT R+P+ + G+++ H + E+ E FI R+ +
Sbjct: 61 SRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFILRLFRQK 120
Query: 144 NREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVR 203
N+ +I+AF+D A +GF ER+M++LF+RKL+LWPRF V V+ LE+ P VV++
Sbjct: 121 NKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIH 180
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWH 262
V M+ M IQ AIL++++ACLKE++ N ++VEDL++EN + K FD+ +R LDP+WH
Sbjct: 181 VSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWH 240
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE-SF--RSVWIFAESSYKI 319
LG KTK LV DLK LR LL YL +YD VT+L L++LR +E +F S W+F +SS +
Sbjct: 241 QLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSM 300
Query: 320 FDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLE 379
F A+ RVY + ++ K + +K++ E ++ E VLE
Sbjct: 301 FINARARVYHLPDA----------KMSKKGKISEKMEIKEGQEAKK---------ELVLE 341
Query: 380 EAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
PKW+ L EVL+EIE A ++E L G G VL+ D+ +C QL D I
Sbjct: 342 SNPKWEALTEVLKEIE------AENKESEALGGP----GQVLICASDDRTCSQLRDYITL 391
Query: 440 GSE----KVMREEWEK 451
G+E ++ R+ +EK
Sbjct: 392 GAEAFLLRLYRKTFEK 407
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 495 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 554
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 555 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 608
>gi|116193577|ref|XP_001222601.1| hypothetical protein CHGG_06506 [Chaetomium globosum CBS 148.51]
gi|88182419|gb|EAQ89887.1| hypothetical protein CHGG_06506 [Chaetomium globosum CBS 148.51]
Length = 944
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 192/663 (28%), Positives = 321/663 (48%), Gaps = 142/663 (21%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y++G IF +T RIL+VD+LT L + GL++L+ + S E FI RI + N
Sbjct: 108 REKMYAAGGIFSITSRILVVDMLTGLLNPETITGLVVLHADRIVATSLEAFILRIYRQKN 167
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P +GF+ +M+++F+RK LWPRF V+V+E LE ++ V+++
Sbjct: 168 KVGFLKAFSDNPDPFTTGFSPLATMMRNMFLRKASLWPRFHVHVAEALEGKKKAEVIELE 227
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPM+ M IQ AI+E ++ ++E++K N ++++D +++ L K+FD I+RRQLDP WH
Sbjct: 228 VPMTDAMRNIQNAIMECVEVSIQELKKGNTGLEMDDWNLDSALLKNFDVIVRRQLDPNWH 287
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAE 314
+ KTKQ+V DL LR +L ++ DAV++L+ LDT+ + S +S W+F +
Sbjct: 288 RVSWKTKQIVGDLTVLRNMLHSILALDAVSFLQQLDTIHAAHSPAPGTTRQTQSPWLFLD 347
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
++ IFD AK+RVY ++ G + +D+ L
Sbjct: 348 AAQVIFDTAKRRVYSSSQRQGPNITN--------------IDS----------------L 377
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
VLEE PKW VL EVLEEI+ + + ++R ++ +G +L+ C D +C QL
Sbjct: 378 RPVLEELPKWAVLAEVLEEIDRDLYFEPAAR--------DDSNGTILIMCSDTDTCRQLR 429
Query: 435 DCIRNGSEK----------------------VMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
D ++ K +MR + YL K + V + + K
Sbjct: 430 DYLQTMHVKPRTEKKVEEFHDPEEDKPSAAFMMRRKLRNYLKWKREFAQVNANLFSENQK 489
Query: 473 EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKG 532
L G ++ Q+ ++ +K+ +IR G +
Sbjct: 490 A------LTGAVDPRLGQSKSRAAANKRR---------RIRGGGVT-------------- 520
Query: 533 PGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSG 592
G GR NG S A +KP G E+
Sbjct: 521 ---GAAPGRLDNG---------------SVAQYFEKP--------GEVAEL--------- 545
Query: 593 GMLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALESDQPILDILKPFV 645
M E E+E + K + D E D + + VH Y + D+ +L+ +KP
Sbjct: 546 -MAEVQITEEETKQKEDVVADPLEDMDDYYQLYEMQDLVVVHAYDGDIDEHVLEEIKPKY 604
Query: 646 IVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQK 705
I++Y PD +F+R++EVY++ + ++VYFL+Y S E Q++ + +RRE +F +I+++
Sbjct: 605 IIMYQPDAAFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSSVRREKDSFTRMIKER 664
Query: 706 SFM 708
+ M
Sbjct: 665 AGM 667
>gi|224070062|ref|XP_002195540.1| PREDICTED: DNA repair endonuclease XPF [Taeniopygia guttata]
Length = 902
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 227/384 (59%), Gaps = 31/384 (8%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP +T ++ N R+ Y+ G + F T RIL+VD LT R+P + + G+++ H + E+
Sbjct: 71 LPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGILVYKAHKIIESC 130
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI R+ + N++ +I+AF+D A +GF ER+MK+LF+ KL+LWPRF + V
Sbjct: 131 QEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLYLWPRFHIAVHSF 190
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFD 250
LE+ P VV++ V M+ M IQ AIL++++ACLKE+++ N ++VEDL++EN + K FD
Sbjct: 191 LEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKRYNPTLEVEDLSLENAIAKPFD 250
Query: 251 EILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE-SF--R 307
+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++L+ SE +F
Sbjct: 251 KTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLESLKASEKAFGEN 310
Query: 308 SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSS 367
S W+F +SS +F A+ RVYR +LN + K +KR +KK
Sbjct: 311 SGWLFLDSSTSMFVNARARVYRIADE---KLNQKGKGSGSEKRDVKK------------- 354
Query: 368 TSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDE 427
++ E VLE PKW+ LREVL+EIE E S L G G VL+ D+
Sbjct: 355 -ENELKRELVLESNPKWEALREVLKEIENENKNSDS------LGGP----GQVLICASDD 403
Query: 428 CSCMQLEDCIRNGSEKVMREEWEK 451
+C QL + I G+E + + K
Sbjct: 404 RACAQLREYIIAGAEAFLTRLYNK 427
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+YKA P L+VYFL Y STE Q++ +R+E
Sbjct: 555 VLQEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQRYLTTLRKEKE 614
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 615 AFEKLIREKASMVVP 629
>gi|121704028|ref|XP_001270278.1| DNA repair protein RAD1, putative [Aspergillus clavatus NRRL 1]
gi|119398422|gb|EAW08852.1| DNA repair protein RAD1, putative [Aspergillus clavatus NRRL 1]
Length = 977
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 314/643 (48%), Gaps = 87/643 (13%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y+ G I VT RIL+VDLL++ L + G+++L+ + S E FI R+ + N
Sbjct: 105 REKIYAEGGILSVTSRILVVDLLSKLLDPEKITGMVVLHAEKIIATSLEAFIIRVYRQNN 164
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P +GFA +++LF+RK LWPRF V V+E LE V+++
Sbjct: 165 KLGFLKAFSDSPEPFTTGFAPLANSLRNLFLRKTSLWPRFHVTVAESLEGNRKAEVIELE 224
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPM+ M IQ A+LE ++ + E++K N +D+ D T+++ L +SFD +RRQLDP+WH
Sbjct: 225 VPMTDKMREIQNAVLECVEISIAELKKANTGIDMADWTLDSALHRSFDIAIRRQLDPMWH 284
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAE 314
++G +T+Q+VSDL LR +L L+ YDAV+++KYLDT+ + S S W+F +
Sbjct: 285 LVGFRTRQIVSDLSDLRAILHALLTYDAVSFVKYLDTIVTAHSPPPGSTRHNHSPWLFLD 344
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
+++ +F AK RVY + K + R T+S S L
Sbjct: 345 AAHGLFQTAKSRVY------------EGKITSDATR--------------TASGSLPSTL 378
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
VLEE PKW VL E+LEEIE++ ++ + VL+ C D+ +C QL
Sbjct: 379 RPVLEEQPKWAVLAEILEEIEQDSYLNPMH--------ADDSNSTVLIMCTDQRTCRQLR 430
Query: 435 DCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEA 494
+ + ++ + E + + + P +L +
Sbjct: 431 EYLGTMHARIDKNEEDN-----------TEHNDGFQDNRPSAQVMLRRRLREYLDWKTSL 479
Query: 495 SSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPG----RGRGKGRNRNGPACVP 550
S+V+K A I+ Q ++P T G + P R RG G + PA VP
Sbjct: 480 SNVNKNLSSKSDADTQAIKGQ------ESPRT-TGQRAPPNKRRRVRGGGAASSAPARVP 532
Query: 551 QSANKDSKSNSKAAIEDKPEISGSGNE-GPADEIHSGVVGYSGGMLETAFVEKEVQWKRS 609
++ + E E++ NE P D LE
Sbjct: 533 NAS-------VQTDTELPGEVTSLLNELQPTDVEEIQKEEIIIDDLEDM----------- 574
Query: 610 LKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSI 669
+ E D + VH Y + D+ ILD ++P I++Y P+ +F+R++EVY++ +
Sbjct: 575 --DNFFELYDMDDLVIVHPYDGDMDEQILDEVRPRYIIMYEPEPAFIRRVEVYRSSHVGR 632
Query: 670 KLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
++VYF++Y S E Q++ + +RRE +F LI++K M + +
Sbjct: 633 NVRVYFIYYGGSVEEQRYLSAVRREKDSFTKLIKEKGSMAVTL 675
>gi|322709679|gb|EFZ01255.1| MUS38-like protein [Metarhizium anisopliae ARSEF 23]
Length = 942
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 203/741 (27%), Positives = 357/741 (48%), Gaps = 122/741 (16%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
LE+ QH+ EL E LV+L+ GL L +L+ ++L + + L+++ +
Sbjct: 16 LEYQQHLFQELRAEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIVIVGAEERENGWI 73
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L AP A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISAAPKARGLTVVNTDFQSVGAREKMYAGGGIFSITSRILVVDLLTGLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ESITGLVVLHADRVIATSLEAFILRVYRQKNKIGFLKAFSDNPDPFSTGFSPLSTMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+++ LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 194 FLKRASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMTHIQNAIMECVEVSIHELKKGN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L K+FD ++RRQLDP WH + KT+Q+V+DL LR LL ++ YDAV
Sbjct: 254 SGLEMDDWNLDSALLKNFDVMVRRQLDPNWHRVSWKTRQIVNDLTVLRGLLTSVLAYDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ IFD A++RVY
Sbjct: 314 SFLQHLDTIHAAHSPPPGSSRQNQSPWLFLDAAQTIFDTARRRVY--------------- 358
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ + + + +N D L VLEE PKW +L EVLEEI+ + +
Sbjct: 359 --SASAKTISQSGDNIDS------------LRPVLEELPKWALLAEVLEEIDRDLYFEPP 404
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
+R+ + +G +L+ C + C + +R+ + +
Sbjct: 405 ARD--------DSNGTILIM------CSNTDTC------RQLRDYLQTMHVKPRVATPTT 444
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
T+ ++ + +P ++ + + + VS A L + ++ G +D
Sbjct: 445 TTEDEEDAHKPSAAFMMRRRLRSYLTWKRQFAQVS-----ATLFSENQKALNGAAD---- 495
Query: 524 PETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEG-PADE 582
+ G G GRG+ R + G GN G A
Sbjct: 496 --SRPGHAGMGRGKPPSNKRR-------------------------RVRGGGNAGVSAGR 528
Query: 583 IHSGVVG--------YSGGMLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVH 627
+GV+ + M E E+E Q K + D ++ + + + VH
Sbjct: 529 TDTGVIAQYFEKPGEVAHLMAEVQITEEEAQQKDDIIADPLDNMEDYYQLYEMQDLVVVH 588
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
Y + D+ +L+ +KP I++Y PD SF+R++EVY++ + ++VYF++Y S E Q++
Sbjct: 589 AYDGDQDEHVLEEVKPRYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQRY 648
Query: 688 KAGIRRENGAFESLIRQKSFM 708
A +RRE +F LI++++ M
Sbjct: 649 LASVRREKDSFTKLIKERASM 669
>gi|327306946|ref|XP_003238164.1| DNA repair protein RAD1 [Trichophyton rubrum CBS 118892]
gi|326458420|gb|EGD83873.1| DNA repair protein RAD1 [Trichophyton rubrum CBS 118892]
Length = 973
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 228/763 (29%), Positives = 365/763 (47%), Gaps = 163/763 (21%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q+++ EL E LVIL+ GL L K+I ++L + + L++L + + +++ I
Sbjct: 16 LQYQQNLLNELRSEDE--LVILAQGLGLLKIITNLLHTYDAAGNNLIILVGATDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY +PL L T + RH +YS G I VT RIL+VDLL++ L
Sbjct: 74 GEALAEHYAISKSPLARGLKVINTDRATVSMRHKMYSEGGIISVTSRILVVDLLSRLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+IIL+ K N++ ++AFSD P +GFA ++++L
Sbjct: 134 KLITGMIILHAE---------------KQYNKDGMLKAFSDTPEPFTTGFAPLSNMLRNL 178
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE V+++ V M+ M IQ A+LE ++ ++E++++N
Sbjct: 179 FLQKTSLWPRFQVTVAESLEGHRKAEVIELEVLMTDKMKEIQNAVLECVEVNIRELKRSN 238
Query: 233 K-VDV-EDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
+DV +D TV++ L K+FD +RRQLDP+WH + +T+Q+ SDL LR +L L+ +DA
Sbjct: 239 TGLDVGDDWTVDSALHKNFDVAIRRQLDPVWHRVSFRTRQIASDLTVLRSILHSLLTFDA 298
Query: 291 VTYLKYLDTLRVSESF--------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V+ KYLDT+ + S S W+F +++ +FD AK RVY
Sbjct: 299 VSLNKYLDTVISAHSAPAGSTKQNYSPWLFLGAAHVLFDTAKSRVY-------------- 344
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVV--LEEVLEEAPKWKVLREVLEEIEEERLK 400
KK+ +K T+S+S+ + +E VLEE PKW VL EVL+EIE++
Sbjct: 345 -----KKKASEK----------TTSSSSGIFNGIEPVLEEQPKWAVLAEVLQEIEQDTYL 389
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEK----------------- 443
++ G N+ +LV C D+ +C Q+ + I +K
Sbjct: 390 NPAA------PGSSNN--AILVMCSDQQTCRQVREYISTMHKKEKSFDENENDEADIIPY 441
Query: 444 ----------VMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAE 493
+MR + +YL K L +V K K KG + G V
Sbjct: 442 KDEHQPSAGTMMRRKLREYLYWKRNLSNVNNHLYDVKPKT-KGIAEVPGFTSV------- 493
Query: 494 ASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSA 553
SSV Q H + R +G G + T G+ P G S
Sbjct: 494 -SSVGPQGHAGRAPPNKRRRVRG----GSSAATASGAGRPAHG---------------SV 533
Query: 554 NKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTD 613
D+ ED PE+ E +++ A +E EVQ +L+ D
Sbjct: 534 QVDT--------EDFPEVPNLSEE----------------VIQQAILE-EVQ-HITLEDD 567
Query: 614 TA------ESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENP 667
E D + VH Y + D+ +L+ L+P I++Y PD +F+R++EVY++ +
Sbjct: 568 LQDMDNYYELYDVNDLLVVHHYDGDMDEHVLEELRPRYIIMYEPDAAFIRRVEVYRSSHQ 627
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
++VYF++Y +S E Q++ + +RRE AF LI ++ M +
Sbjct: 628 ERNVRVYFMYYGESVEEQRYLSAVRREKDAFTKLIHERGTMAM 670
>gi|67903452|ref|XP_681982.1| hypothetical protein AN8713.2 [Aspergillus nidulans FGSC A4]
gi|40741072|gb|EAA60262.1| hypothetical protein AN8713.2 [Aspergillus nidulans FGSC A4]
Length = 942
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 222/729 (30%), Positives = 349/729 (47%), Gaps = 127/729 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L+F Q I EL E LVIL+ GL L +LI ++L + + L+LL + + +++ I
Sbjct: 16 LQFQQDIFTELRGEDE--LVILARGLGLLRLITNLLHFYDAAGNNLVLLVGANDRENEWI 73
Query: 63 HYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQR--LPTSNLAGLI 120
+ PS + D V LLT+ L + GL+
Sbjct: 74 ------GEVYPSSVVPD------------------------VKLLTRSELLDPERVTGLV 103
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L+ + STE FI RI ++ N+ +++AFSD P +GFA +++LF+RK L
Sbjct: 104 VLHADKIVATSTEAFIIRIYRNANKSGFLKAFSDSPEPFTTGFAPLANSLRNLFLRKASL 163
Query: 181 WPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
WPRF V V+E LE V+++ VPMS M IQ A+LE ++ C+ E++K N +D+ D
Sbjct: 164 WPRFHVTVAESLEGHRKAEVIELEVPMSDKMREIQNAVLECVELCIGELKKANTGLDMAD 223
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
T+++ L +SFD +RRQLDP+WH + +TKQ+VSDL LR +L L+ YDAV+++KYLD
Sbjct: 224 WTLDSALHRSFDISIRRQLDPMWHRVSFRTKQIVSDLSDLRAILHALLTYDAVSFVKYLD 283
Query: 299 TLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
T+ + S S W+F ++++ +F AK RVY
Sbjct: 284 TIVTAHSPPPGSTRHNYSPWLFLDAAHVLFQTAKSRVYE--------------------- 322
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLL 410
K+ N E +S TS L VLEE PKW VL E+LEEIE + +S
Sbjct: 323 --GKIGN---ELSRSSMTSLPTTLRPVLEEQPKWDVLAEILEEIEMDAYHNPAS------ 371
Query: 411 DGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKK 470
GE N+ VL+ C D+ +C QL + + + KV E E V S+ K+
Sbjct: 372 TGESNN--TVLIMCTDQRTCCQLREYLGTMNTKVEDERQE-----------VADGSEDKQ 418
Query: 471 SKEPKGYGILD---------GVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG 521
K+ G +L + V + +N A V+++ G D
Sbjct: 419 EKKRSGEVMLRRKLREYVNWKRSLVNVNKNLTAKPVNEEPR------------TGSGRDS 466
Query: 522 DNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPAD 581
P T G P + R R R G A V A +P S + P++
Sbjct: 467 PRPTTQQGRAPPNKRR---RVRGGAASV--------------AAPRQPNSSVQADTEPSE 509
Query: 582 EIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDIL 641
++ + +E + E+ + D E D + VH + + D+ IL+ +
Sbjct: 510 QMSVLLDVIQPTEVEESLKEEIIIDDLEDMGDIYELYDMDDLVMVHPFDGDMDEHILEEV 569
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
+P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RRE AF L
Sbjct: 570 RPRYIIMYEPDPAFIRRVEVYRSSHVGRDVRVYFMYYGGSVEEQRYLSAVRREKDAFTKL 629
Query: 702 IRQKSFMMI 710
I++KS M +
Sbjct: 630 IKEKSNMAV 638
>gi|390357972|ref|XP_003729146.1| PREDICTED: DNA repair endonuclease XPF-like isoform 1
[Strongylocentrotus purpuratus]
gi|390357974|ref|XP_003729147.1| PREDICTED: DNA repair endonuclease XPF-like isoform 2
[Strongylocentrotus purpuratus]
Length = 955
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 277/499 (55%), Gaps = 48/499 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + QE GL++++ GL + +L+ + L L+ +L+++++ ++ +
Sbjct: 3 LLEYENEMFLNAFQE--DGLLVVARGLGISRLMLNFLKLYCDPGNLVLVVNTNDYEENYL 60
Query: 62 IHYLAP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L LP IT + N R +Y G + FV+ RIL+VDLLT+RLP + G+I
Sbjct: 61 IEELDKLGIKPLPKIITNEYGTNERTGVYMQGGVLFVSSRILVVDLLTERLPAHLVTGII 120
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + ++ E FI R+ + N+ +I+AFSD+P +G K ER+M++LF+RKL+L
Sbjct: 121 VNKAHKIIDSCQEAFILRLYRQKNKMGFIKAFSDQPQTFAAGLCKLERVMRNLFVRKLYL 180
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V +ER P V+++++ M+ M IQ +IL+++ AC+KE+++ N +D +DL
Sbjct: 181 WPRFHAAVQALMERHKPEVIELQLTMTPAMVSIQMSILDIIGACIKEVKQVNPSLDSDDL 240
Query: 240 TVENGLF-KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
TVEN + KS ++RRQLDPIWH L KTKQLVSDLK L+ LL YL +YD VT+ +L
Sbjct: 241 TVENAIGKKSLTNVIRRQLDPIWHTLSSKTKQLVSDLKLLQMLLFYLTQYDCVTFYNFLK 300
Query: 299 TLRVSE---SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
TLR +E + + W+F E++ +F +AK+R+Y G KK+K K
Sbjct: 301 TLRGNERAMANNTGWLFLEAAEMMFVHAKRRIY-----------GDPSDNKNKKQKTDKK 349
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
+ T++ + + E +LEE PKW++L EVLEEI +E S R
Sbjct: 350 E--------TATNTKQTQRELLLEENPKWRMLSEVLEEIRQENTGDTSGR---------- 391
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL-------LSKVQLRSVQTSSKK 468
VL+ D+ +C QL + + +GS +++ ++K L + Q TS+
Sbjct: 392 ----VLICASDDRTCAQLREYLCDGSYALLQRLYQKTLGAGQPFTATAAQASGSSTSNVG 447
Query: 469 KKSKEPKGYGILDGVAPVK 487
+ +G G G+ VK
Sbjct: 448 GRDARGRGKGERSGLGKVK 466
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
L+P +++Y ++ FVRQ+EV+KA P+ L+VYFL Y STE QK+ +R E AFE+
Sbjct: 556 LEPRYVILYDAEIQFVRQLEVFKACRPNHPLRVYFLIYSGSTEEQKYLTSLRYEKSAFEN 615
Query: 701 LIRQKSFMMIPID 713
LI++KS M++P D
Sbjct: 616 LIKEKSTMVLPAD 628
>gi|241116678|ref|XP_002401556.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ixodes
scapularis]
gi|215493146|gb|EEC02787.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ixodes
scapularis]
Length = 775
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 264/463 (57%), Gaps = 45/463 (9%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + +L E GLVIL+ GL + +L+ S++ +H+ +L+L ++ +
Sbjct: 3 MLEFETQLFLDLHNE--DGLVILAKGLGIERLLLSLIKVHNDPGNLVLVLGTTSQEEEFF 60
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L A N LP ITAD R+ +Y +G + FVT RIL+VD+LT+R+P + + G+I
Sbjct: 61 ISRLEADNVNPLPKSITADCSTKDRNDVYLAGGVLFVTSRILVVDMLTERIPINLITGII 120
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ + H E+ E FI R+ + N+ +I+ SD A GF + +R+M++LF++KL L
Sbjct: 121 VYHAHKTLESCQEAFILRLYRQKNKTGFIKGLSDNAVAFTYGFCQVQRMMRNLFVKKLFL 180
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V L + P VV++RV M+ M IQ AIL+++ +C++E+++ N ++++DL
Sbjct: 181 WPRFQADVIASLNKRKPDVVELRVGMTPAMQAIQLAILDIVASCVREIKRVNPSMEMDDL 240
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + +SF++I++ QLDPIWH LG KT+ LVSD+KTLR +L YL +YD VT+ + +
Sbjct: 241 TVENLIARSFEKIIKFQLDPIWHQLGAKTRHLVSDIKTLRTILQYLTQYDCVTFYSLVKS 300
Query: 300 LRVSESFRSV---WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
+R + + S W F +++ +F AK RVY G ++KL K
Sbjct: 301 VRDAGTMTSQISDWFFLDAAETLFLQAKARVY------------------GSEQKLHK-- 340
Query: 357 NNEDEDGGTSSTSTKVVLEEV---LEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGE 413
E+ G ++T ++ E +EE+PKW L E+L EI E + +
Sbjct: 341 --EEAKGKEATTKGELSPSEATLRMEESPKWAALSEILVEIGRE-------------NKD 385
Query: 414 ENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSK 456
D VLV +D+ C QL + + G + V+R+ + K + K
Sbjct: 386 CGDLNSVLVIAEDDRVCGQLTEYLCCGGQAVLRKIYRKSVADK 428
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 612 TDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENP 667
T+ A + +P F+ L S Q +L ++P IV+Y +++ VR+IE+Y+A
Sbjct: 473 TEAATAVFPPNLPNTVFHPLRSSAFALQQLLLTVEPKYIVLYDVNIATVREIEMYQATRA 532
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
L+VYFL YEDS + Q++ +RRE AFE LIR+K+ M++P +Q
Sbjct: 533 KEVLRVYFLMYEDSVDEQRYLTALRREKDAFEFLIREKNVMVVPEEQ 579
>gi|443686899|gb|ELT90017.1| hypothetical protein CAPTEDRAFT_178005 [Capitella teleta]
Length = 891
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 262/457 (57%), Gaps = 41/457 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I + + GL++ + GL L ++ S L ++S + +L+L+++ +
Sbjct: 3 LLEYENQIFLDAFHD--DGLLVTARGLGLERIFRSFLKVYSDAGNLVLVLNTNQQDEDYF 60
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L LP IT++ R Y G + F+T RIL+VD+LT R+P ++G++
Sbjct: 61 IEQLDEEKCRPLPKAITSEYSVKDREATYLEGGVLFITSRILVVDMLTNRIPIHLISGIL 120
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
I H + ++ E FI R+ + N+ +I+AFS+ PT+ +GF ER+MK LF+RKL+L
Sbjct: 121 IYKAHRILDSGQEAFILRLYREKNKTGFIKAFSNSPTSFTAGFCHVERVMKCLFVRKLYL 180
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRFQ +V L++ V+++ + M+ M Q A+L+++DAC+KE+++ N +D E++
Sbjct: 181 WPRFQASVVSCLDKNKVDVIELHLQMTPAMLACQTALLDLIDACIKELKRRNPSLDTEEM 240
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN L D+I+R LDPIWH LG T+QL+SD+KTLR LL YL +YD V + +++
Sbjct: 241 TVENSLGHDLDQIIRLHLDPIWHQLGSNTRQLISDIKTLRLLLQYLTQYDCVNFYNLVNS 300
Query: 300 LRVSE-SFRSV--WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +++ +F +AK+R+Y +K KK
Sbjct: 301 LRTNEKAFGSNAGWLFMDAADSLFLHAKERLY---------------------QKEKKKT 339
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
N++D T+ S + +LEE PKW+ L+EV+EEIE L + D E
Sbjct: 340 NSKD----TAPKSELLSSPFLLEECPKWQTLKEVVEEIEGYHLTK---------DEEGFG 386
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
G VL+A D+ C QL + + +G + +++ ++K++
Sbjct: 387 QGRVLIAAADDKMCSQLREVLCDGGQVMLKRLYDKFI 423
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 54/74 (72%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L+ L+P +++Y D++FVRQ+EV++A +P L+VYFL Y+ STE Q++ +RRE A
Sbjct: 525 LEELQPTYVILYDADVTFVRQLEVFRASHPDKPLRVYFLMYKGSTEEQRYLTSLRREKEA 584
Query: 698 FESLIRQKSFMMIP 711
FE LIR K+ M+IP
Sbjct: 585 FEYLIRSKATMVIP 598
>gi|258572484|ref|XP_002545004.1| MUS38 protein [Uncinocarpus reesii 1704]
gi|237905274|gb|EEP79675.1| MUS38 protein [Uncinocarpus reesii 1704]
Length = 988
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 214/736 (29%), Positives = 364/736 (49%), Gaps = 97/736 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L +++ ++L + + L+L+ S+ + +++ +
Sbjct: 16 LQYQQDVFQELRSEDE--LVILAPGLGLLRIVTNLLHTYDAAGNNLVLVVSANDRENEWL 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY PL L T + R LY+ G + VT RILIVDLL+ L
Sbjct: 74 GEALAEHYAVSKTPLARGLKVINTDKAKVSARQQLYAQGGVLSVTSRILIVDLLSTLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G++IL+ + S E FI R+ + N+ +++AFSD P +GFA +++++
Sbjct: 134 ETITGMVILHAEKVISTSLEAFIIRVYRQFNKTGFLKAFSDAPEPFTTGFAPLANMLRNM 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQ+ V+E LE R+ ++ V M+ M IQ A+LE ++ ++E++K+N
Sbjct: 194 FLQKTSLWPRFQITVAESLEGRKKAEALEKVVSMTDKMRDIQNAVLECVEVSVRELKKSN 253
Query: 233 KV-DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
V D++D V++ L K+FD +++RQLDP WH + KT+Q+VSDL L+ +L L+ DA+
Sbjct: 254 PVLDIDDWNVDSALQKNFDVVIQRQLDPNWHRVSVKTRQIVSDLAVLKNILHLLLTDDAI 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ LKYLDT+ + S S W++ E+++ + + A+ RVYR S L G
Sbjct: 314 SLLKYLDTVIAAHSPPPGYTKQTYSPWLYLEAAHVLLETARSRVYRGKLSTQAGLLGPHS 373
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
S+ LE VLEE PKW+VL E L+EIE + +
Sbjct: 374 SLPS-------------------------ALEPVLEEQPKWQVLAETLDEIERDLYLNPT 408
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
G++++H I L+ C D R ++V E+ + S+VQ +
Sbjct: 409 P-------GDDSNHAI-LIMCSD-----------RKACQQV--REYLHTMHSRVQSEN-G 446
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
S ++ EP + + K+ + ++L +K R++ K G
Sbjct: 447 GGSNTPEAMEPGPSA--EFMMRRKLRDYINWKRDFAKVRNSLYGINAK-RSEVKEVPGYT 503
Query: 524 PETYYGSKGPGRGRGKGRNR-NGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEG---- 578
T ++ P RG R R G + +A + S+ + +D ++S +E
Sbjct: 504 SVT--TNRVPERGPPNKRRRVRGSSSTASNAGRTPNSSIQEKADDTTQVSTLLDEALQPT 561
Query: 579 PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKT--DTAESKDSKPVPPVHFYALESDQP 636
PA+ EKE L+ D E D K + +H Y + D+
Sbjct: 562 PAE-----------------VAEKEHVIVDDLQDMEDYYELFDMKDLIIIHAYDGDMDEH 604
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
IL+ +P I++Y P+ +F+R+IEVY++ + + ++V+ ++Y DS E Q+F + +RRE
Sbjct: 605 ILEEARPRYIIMYEPNAAFIRRIEVYRSSHTNRDVRVFVMYYGDSVEEQQFLSAVRREKD 664
Query: 697 AFESLIRQKSFMMIPI 712
AF LI++K M + +
Sbjct: 665 AFTKLIKEKGSMAMSL 680
>gi|449298874|gb|EMC94889.1| hypothetical protein BAUCODRAFT_73572 [Baudoinia compniacensis UAMH
10762]
Length = 954
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 200/735 (27%), Positives = 355/735 (48%), Gaps = 104/735 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
L + Q + +EL E L+I + GL L +L+ ++L + + L+LL + +
Sbjct: 23 LSYQQELFSELRAE--DALLIQARGLGLLRLVTNLLHSYDAAGNNLILLVGADDRENGWI 80
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L Q +P L T + R LYS+G IF +T RILIVD L+ L
Sbjct: 81 GEALAEQAATSGSPKCRGLKLVNTDLMSVGTREKLYSNGGIFSITSRILIVDFLSGLLDA 140
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ + G+++L+ + S E FI R+ + N+ +++AFSD+P + + I+++L
Sbjct: 141 AKVTGMVVLHAERVAATSQEAFIVRMFRQKNKNGFLKAFSDQPEPFTASYQPLTGILRNL 200
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+R L+PRF V V++ LE + V+++ VPM+ M IQ A+LE ++ + E++K N
Sbjct: 201 FLRTPLLYPRFHVTVAKSLEGKRKAEVIELEVPMTDAMRDIQNAVLECVEVSIMELKKGN 260
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L +SFD I+RRQLDP+WH +TKQ+V DL LR +L L+ +DAV
Sbjct: 261 TGLEMDDWNLDSALHRSFDTIVRRQLDPVWHRTSFRTKQIVRDLSLLRTILHSLLTFDAV 320
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ KYLDT+ + S +S W+F ++++ +FD AK+RVY
Sbjct: 321 SFNKYLDTVLAASSPPPGSTRQSQSPWLFLDAAHTLFDTAKRRVY--------------- 365
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TG+ + GT++T L VLEE PKW +L E+LEEIE +
Sbjct: 366 --TGRIAE------------GTATTEHD-GLNPVLEELPKWNLLAEILEEIERDVYFNPQ 410
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
+E +G +L+ C D+ +C QL + ++ + L S+
Sbjct: 411 PHDE--------SNGSILIMCGDQGTCRQLREFVQT--------------MFVGDLHSLN 448
Query: 464 TSSKKKKSKE---PKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD 520
S++K+ + E P G ++ + + + D +++ K+ +
Sbjct: 449 GSAEKEDAYEDRKPSGNYLM----------RRRLRNYLQWKRDFARVSSNLFTENQKAIN 498
Query: 521 GDNPETYYGSKGPGRGRGKGRNR-NGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGP 579
G + + GRG R R G VP + + + + A + I +E
Sbjct: 499 GTSTHPSGQANRGGRGPPNKRRRVRGGGNVPSAPQRTASGSVHVAGDRDAHIQALMHELA 558
Query: 580 ADEIHSGV----VGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQ 635
+E V V + L+ D E + + + +H Y + D
Sbjct: 559 PNETEDNVDAVKVDFGADPLDDM-------------DDYYELYEMRDLVLIHPYDGDVDD 605
Query: 636 PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRREN 695
+L+ +KP +++Y PD +F+R++EVY++ + + +++ YF++Y S E Q++ + +RRE
Sbjct: 606 HLLEEVKPRYVIMYEPDAAFIRRVEVYRSSHGNRQVRCYFMYYGSSVEEQRYLSAVRREK 665
Query: 696 GAFESLIRQKSFMMI 710
+F LIR++ M +
Sbjct: 666 DSFTKLIRERGNMAL 680
>gi|426191974|gb|EKV41913.1| hypothetical protein AGABI2DRAFT_212972 [Agaricus bisporus var.
bisporus H97]
Length = 988
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 375/753 (49%), Gaps = 96/753 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ E+ L+IL+ GL L ++I +++ ++ ++ +LL++++ +S I
Sbjct: 4 LLPFHKSILEEIHDPATSDLLILARGLGLRRIICTLMKIYDSNKNLVLLVNATQEEESAI 63
Query: 62 IHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P I + + R LY G + VT RIL+VD+L +P + G+
Sbjct: 64 GEELGIMGCRRPGLRVIGYETSSKDRQNLYKQGGLMSVTSRILVVDMLQNDIPVHLITGM 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
+IL+ +T E FI R+ + NR+ +++AF+D+P + SG + + +MK L +R+ H
Sbjct: 124 LILHAERVTPTVIEAFIVRLFREKNRDGFVKAFTDQPEHITSGMSPLKNVMKELQLRRAH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
L+PRF ++++ LER VV++ P+S+ M I AI++ + L E++++NK ++++D
Sbjct: 184 LYPRFHEHINKTLERRRADVVELSQPLSQSMSEIHHAIIQCISTTLAELKRSNKELELDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
VEN F+SF+ I+R +L P+WH +G KTKQL++DL LR+LL YL+ YDA+++ YL+
Sbjct: 244 FNVENTYFRSFEGIVRSRLSPVWHKVGPKTKQLINDLNVLRQLLFYLLSYDALSFHAYLE 303
Query: 299 TLRVSESF----------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
T+ S + +S W+ +++ IF+ AK+R + + + +VT +
Sbjct: 304 TIIESNTISARTGGPKVHQSPWLLTDAANIIFEVAKRRCFI------ISAIPKETAVTHQ 357
Query: 349 KRKLKKVDN----NEDEDGGTSSTSTKVV----------LEEVLEEAPKWKVLREVLEEI 394
++ D +E E GT++ + + ++ VLEE PKW +L E+L EI
Sbjct: 358 PMEVDDQDAWDLLDELEQPGTNNQGKRKLHERPAWLPKNIQPVLEEQPKWDLLSEILLEI 417
Query: 395 EEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLL 454
E E + SS + + G + VL+ SC ++D + M + E
Sbjct: 418 ESE-IIHLSSNKNISQRGTDT----VLIMTSSTRSCDLIQDFL-----DTMDPDAESGWK 467
Query: 455 SKVQLRSVQTSSKKKKSKEPKGY----GILDGVAPVKIAQNAEASSVSK--QEHDALLAA 508
+V +R + KGY G L+ A +A S+ +E + L+
Sbjct: 468 GRVMMR-----------RRLKGYLGWRGRLNPDDNNNFATTNQAGMTSRKGKEREDNLSE 516
Query: 509 ASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDK 568
A K +++ K + + ++G G GR+ P+ + D + +D
Sbjct: 517 ALKKKDREKMEKS---ASRRRTRGGAPSTGGGRSATSDKASPEVIDVDKPGDMTLWSKDD 573
Query: 569 PEISGS----GNEGPADEIHSGVVGYSGGML---ETAFVEKEVQWKRSLKTDTAESKDSK 621
P+++ + N+ D + S G+L +T + R+ DT
Sbjct: 574 PDLAATLMNASNDFALDLLTQDEFESSYGLLPPEQTIVI-------RACSDDT------- 619
Query: 622 PVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDS 681
D +L ++P IV++ P + F+R++EVY++ P + ++VY + Y DS
Sbjct: 620 ------------DDRMLAEIQPRFIVMFEPSVEFIRRVEVYRSSYPGMAVRVYHMVYADS 667
Query: 682 TEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
E ++ A IR+E +FE L++++ M++ +++
Sbjct: 668 CEEHRYLAAIRKEKESFERLVKERGSMLLTLEE 700
>gi|74216050|dbj|BAE23706.1| unnamed protein product [Mus musculus]
Length = 380
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 237/398 (59%), Gaps = 26/398 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 4 LLEYERQQVLELLD--SDGLVVCARGLGTDRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 61
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 62 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 122 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 182 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E S W+F ++S +F A+ RVYR V+LN ++K T +K +V
Sbjct: 302 LRATEKVFGQNSGWLFLDASTSMFVNARARVYRVP---DVKLNKKAK--TSEKTSSPEVQ 356
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEI 394
+ E VLE PKW+ L +VL+EI
Sbjct: 357 ETKK--------------ELVLESNPKWEALTDVLKEI 380
>gi|299754812|ref|XP_001828210.2| hypothetical protein CC1G_02791 [Coprinopsis cinerea okayama7#130]
gi|298410935|gb|EAU93561.2| hypothetical protein CC1G_02791 [Coprinopsis cinerea okayama7#130]
Length = 986
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 217/770 (28%), Positives = 379/770 (49%), Gaps = 106/770 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH ++ + L++L+ GL L ++I ++L ++ + +LL+++SP ++ I
Sbjct: 4 LLPFHTTVLNAIHDPATSDLLVLARGLGLRRVICTLLKIYDNPKNLVLLINASPEEETAI 63
Query: 62 IHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P + + N R LY G I VT RIL+VD+L +P ++G+
Sbjct: 64 GEELGLMGCRRPGLRVVGYETAKNQRQELYKGGGIIAVTSRILVVDMLQNDIPIDLISGI 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
+L+ +T E F+ R+ + N+E +++AF+D+P + SG + IMK L IR++H
Sbjct: 124 FVLHAEKVTPLVLEAFVIRLYREKNKEGFVKAFTDQPEHITSGMSPLRNIMKELQIRRVH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
++PRF ++ + LER V+++ MS M I AI++ M A L ++R++N +D++D
Sbjct: 184 IFPRFHADIKKSLERRRADVIELAQDMSGPMAEIHGAIIQCMSATLADLRRSNTSIDLDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
VEN F+ FD I+R+QLDP+WH + +TKQLV+DL TLR+LL YL+ YD++ + YL+
Sbjct: 244 FNVENAYFRQFDIIVRKQLDPVWHKVAPRTKQLVNDLGTLRRLLFYLLTYDSLQFHAYLE 303
Query: 299 TLR---------VSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
TL+ ++ S W+ ++++ IF+ A++R Y F+ + S+S + K
Sbjct: 304 TLKEASNTTASGAAKVNHSPWMMTDAAHIIFENARRRCYTFSAAP------MSRSTSANK 357
Query: 350 RKLKKVDNNEDEDGGTS------STSTKVV----------------------LEEVLEEA 381
+ + +D +DED + +T V L+ VLEE
Sbjct: 358 QPV-VIDLVDDEDAWAALDEMEGNTPAPVPSKSKGKKEPVVKKERPDWLPEGLDPVLEEL 416
Query: 382 PKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGS 441
PKW +L E+L+EIEEE ++Q S + + VLV + L + + +
Sbjct: 417 PKWDLLTEILQEIEEEIVRQESMKRP--MGAPMIGSNTVLVMTSSTRTSQLLTEFLSSAD 474
Query: 442 EKVMR-EEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQ 500
+ ++ + ++ K+++ + K K+ E K G G ++ ASS S
Sbjct: 475 LDAPKGQKGREMMMQKLRVYLWWKNQKAKEKNEEKSKGSGSGY------RSPAASSSSTT 528
Query: 501 EHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNG-PACVPQSANKDSKS 559
+ D ++ A + +++ K++ R + + R R G PA P +K +
Sbjct: 529 QRDKGISEALQRKDKEKAE---------------RNQSRRRVRGGAPAASPSDRSKTQGT 573
Query: 560 NSKAA----IEDKPEISGSGNEGPADE--------IHSGVVGYSGGMLETAFVEKEVQWK 607
A IE+ N P D I V S G+ E F E
Sbjct: 574 QKPATNPNDIEEFWLTQIDTNATPLDAPTADTSSMIIDLVTAESAGLFEQEFDEL----- 628
Query: 608 RSLKTDTAESKDSKPVPP-----VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVY 662
+PP V Y+ +SD +L ++P IV+ P+M FVR++EVY
Sbjct: 629 ------------YGLIPPEQTVLVRAYSDDSDDRMLAEVQPKFIVMCEPNMEFVRRVEVY 676
Query: 663 KAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
++ +P + ++VY L Y +S E K+ A IR+E +FE +I++++ M++PI
Sbjct: 677 RSSHPGLGVRVYHLVYRNSCEEHKYLAAIRKEKESFERMIKERATMLMPI 726
>gi|395328232|gb|EJF60626.1| hypothetical protein DICSQDRAFT_87823 [Dichomitus squalens LYAD-421
SS1]
Length = 983
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 220/761 (28%), Positives = 380/761 (49%), Gaps = 104/761 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L FH I+ ++ LV+L+ GL L +++ +L ++ +LL++++P ++
Sbjct: 3 VLLPFHTAILDKVHDPATSELVLLARGLGLRRIVCKLLQIYDSPHNLVLLVNATPEEEAA 62
Query: 61 IIHYLAPNAPLLPSE--ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
I L P + + R LY G + +T +I VD+LT +PT + G
Sbjct: 63 IGEELGIMGCRNPGLRIVGFETGRKDRQDLYKKGGLVSITSQIFTVDMLTSDIPTHLITG 122
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
++IL+ +T S E FI R+ + N++ +++AFSD+P + SG + IMK L +R +
Sbjct: 123 ILILHAERVTPTSAEAFIVRLYREKNKKGFLKAFSDQPEHITSGMSPLRTIMKELQLRTV 182
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVE 237
H++PRF ++ E L+R+ P +V++ M++ M I AI++ M L E+++ N +D++
Sbjct: 183 HIYPRFHADIKESLDRKAPDIVELHQEMTEPMSEIHHAIVQCMSTTLAELKRANTALDLD 242
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DLT++N F+SFD ++RR LDP+WH +G +TKQLVSDL TLR+LL YL+ YDA+ + YL
Sbjct: 243 DLTIDNAYFRSFDIVVRRILDPVWHKVGPRTKQLVSDLATLRRLLTYLLAYDALAFHAYL 302
Query: 298 DTLRVSES---------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
+TL + + +S W+ +++ IF YAK+R Y + L SV
Sbjct: 303 ETLIAANTTTDSGAARHHQSPWMLTDAANVIFQYAKRRCYVTSAPSKPALQSAQPSVINL 362
Query: 349 KRKLKK----VDNNEDEDGGTSSTSTKV---------------VLEEVLEEAPKWKVLRE 389
L+ +D E E G S S+ +E VLEE PKW +L +
Sbjct: 363 VDDLEDEWAILDEMEAEVAGRPSGSSGKGKERQRETRKPWLPDGMEPVLEELPKWSLLAD 422
Query: 390 VLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDC-------IRNGSE 442
VL+EIEEE +++ +L VLV +C ++D + GS+
Sbjct: 423 VLQEIEEEMMRREP-----MLSSHSPGTNTVLVMASSLHTCTLIKDFLHLLDADVSKGSQ 477
Query: 443 --KVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQ 500
++M ++ + YL K +L S +K + K P+ + ++ E+
Sbjct: 478 GRRMMEDKLKLYLWWKGKL-----SERKAEGKR-----------PIALPKSTESG----- 516
Query: 501 EHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSN 560
D+ ++ A K +++ + + R + R R G +A +D +
Sbjct: 517 --DSEVSEALKRKDRERQE---------------RQANRRRVRGGAPVA--AATRDKMTA 557
Query: 561 SKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDT------ 614
S + D EI AD+I + + S + ETA + + DT
Sbjct: 558 SGGGLGDV-EIKSE-----ADDIAAFLSAQSVDLAETALTQDFQLFTMDDDFDTHYGLLA 611
Query: 615 -AESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKV 673
A++ +P Y+ +SD +L +KP IV+Y P++ F+R+IEVY+ N + ++V
Sbjct: 612 PAQTVLVRP------YSDDSDDQVLQEIKPRFIVMYEPNLEFIRRIEVYRNSNAGLGVRV 665
Query: 674 YFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
YF+ Y+ S E K+ G+RRE +FE LI+++ M++PI +
Sbjct: 666 YFMMYKLSCEEGKYLTGLRREKESFERLIKERGSMLMPIHE 706
>gi|340373257|ref|XP_003385158.1| PREDICTED: DNA repair endonuclease XPF-like [Amphimedon
queenslandica]
Length = 917
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 276/508 (54%), Gaps = 74/508 (14%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP----N 56
+ L+F EL+ E GL+IL+ GL L +L L LHS + +L++ SS +
Sbjct: 4 VTLDFENENFLELVSE--DGLIILAKGLGLDRLFMKFLKLHSDPRNLVLVIGSSTLYEDH 61
Query: 57 LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNL 116
K+ I L+ N +P +T ++PA R LY G + FVT RIL+VD+L + P +
Sbjct: 62 FKNDIAASLSNNIQQIPRSVTNEIPAKEREELYLKGGVLFVTSRILVVDMLRKVCPVDKV 121
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIR 176
AG+++ N H +T++S+E FI R+ + N+ +I+ FSD P +GF + ERIM++LF++
Sbjct: 122 AGILVYNCHRVTDSSSEAFILRLYREGNKTGFIKGFSDCPEHFTTGFCQLERIMRNLFVK 181
Query: 177 KLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VD 235
++LWPRF V+ LER P V+++R M+ M IQ ++LE+M AC++E+++TN ++
Sbjct: 182 NVYLWPRFHAVVNSSLERHQPDVIELRQQMTPSMTAIQHSVLEIMKACVRELKETNSLLE 241
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
+++T++N L K F++I++ Q DP+W+ L KT+QLV DLK L+ LL +L +YD VT+
Sbjct: 242 SDEITIDNCLGKGFEQIIKIQFDPVWNQLSHKTRQLVYDLKMLKTLLYFLTQYDCVTFYS 301
Query: 296 YLDTLRVSE------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
YL +LR ++ S S W+F + +F A++RVY
Sbjct: 302 YLLSLRSNKKGSPAFSEHSPWVFMPAVNTLFVKARERVY--------------------- 340
Query: 350 RKLKKVDNNEDEDGGTSSTSTKVVLEEV-LEEAPKWKVLREVLEEIEEER---------- 398
E+E GT S K +E + LEE+PKW +L +L E+ +++
Sbjct: 341 --------GEEEASGTKS---KYFVESLSLEESPKWNLLSMILREVRDDKKNREEKIIIK 389
Query: 399 ------LKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
+ + S+ + +DG GI++VA DE +C QL + G + ++ ++ +
Sbjct: 390 EEENKGMNEDSNETHLQVDG-----GILIVA-NDERTCYQLRQYLSEGGKSLLERQYTRL 443
Query: 453 LLSKVQL------RSVQTSSKKKKSKEP 474
L K + + +Q + KK K P
Sbjct: 444 LGDKNTVDVNALPKEMQKKLQSKKGKNP 471
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L KP V+++Y D+ RQIE++KA I LKVYFL Y+ S E Q + I+RE
Sbjct: 554 VLHSFKPSVVILYDADIKLTRQIEIFKATRREIPLKVYFLVYDSSVEEQMYLDSIKREKQ 613
Query: 697 AFESLIRQKSFMMIPIDQ 714
AF+ LI+QK+ M+IP D+
Sbjct: 614 AFQQLIQQKAHMVIPADR 631
>gi|451996406|gb|EMD88873.1| hypothetical protein COCHEDRAFT_1205974 [Cochliobolus
heterostrophus C5]
Length = 949
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 215/739 (29%), Positives = 361/739 (48%), Gaps = 118/739 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LEF Q I EL E L+ GL +++ ++L L+ + L+LL + + ++ I
Sbjct: 15 LEFQQDIFNELRGEDELVLLARGLGLL--RIVTNLLHLYDAAGNNLILLVGADDRENVWI 72
Query: 63 ------HYLAPNAPLLP--SEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
H NAP S + DL R +Y+ G IF +T RILIVD L+ L
Sbjct: 73 GEALAEHAAISNAPKCRGLSLVNTDLMSVGTREKMYAQGGIFSITSRILIVDFLSGLLNP 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GF+ +MK+L
Sbjct: 133 ETVTGVVVLHAERVVATSLEAFILRIYRQKNKVGFLKAFSDTPEPFTTGFSPLTNMMKNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+ K L+PRF V V+ LE R+ V+++ VPM++ M IQ A+L ++A + E++K N
Sbjct: 193 FLTKPALYPRFHVAVANSLEGRKKAEVIELEVPMTEAMQDIQNAVLACVEASISELKKAN 252
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++VED TV++ L K+FD+I+RRQLDP+WH KT+Q+V DL LR +L L+ YDAV
Sbjct: 253 PGLEVEDWTVDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLRTILHALLTYDAV 312
Query: 292 TYLKYLDTLRV--------SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ KYLDT+ ++ +S W+F +++ IF AK+RVY
Sbjct: 313 NFNKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIFTTAKRRVY--------------- 357
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TG KV N E +S + LE VLEE PKW L E+L+EIE++ +
Sbjct: 358 --TG------KVSNAE---LANASNAVPESLEPVLEEFPKWTQLAEILQEIEQDAYLNPT 406
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN------GSEKVMREEWE---KYLL 454
+++ +G +L+ C D+ + QL + ++ GS +E+E K+++
Sbjct: 407 P--------QDSSNGSILIMCGDQGTAAQLREYLQTMYVKPEGSADEDEDEYEPSAKFMM 458
Query: 455 SKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRN 514
+ +LR+ + K+ K V+ ++N +A + + ++ +++
Sbjct: 459 RR-KLRNY-LAWKRDFGK----------VSAALFSENQKAINSNTDKN---------VQS 497
Query: 515 QGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGS 574
+ G P G G +R V + ++D+ S A + E+ +
Sbjct: 498 GARPTSGKPPPNKRRRVRGGANAAAGPSRGDTGAVRTAGDRDAHIASLMAELEPTEVEAA 557
Query: 575 GNEG-----PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFY 629
G P D + S E D + +H Y
Sbjct: 558 QKPGEVGLDPLDNMES----------------------------YYELFDMNSLIIIHPY 589
Query: 630 ALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKA 689
+ + D+ +LD KP +++Y PD +F+R+IEVY++ + +KV+F++Y S E Q++ +
Sbjct: 590 SGDLDEHVLDETKPRYVIMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQRYLS 649
Query: 690 GIRRENGAFESLIRQKSFM 708
+RRE AF LI++++ M
Sbjct: 650 AVRREKDAFTRLIKERANM 668
>gi|189199416|ref|XP_001936045.1| DNA repair endonuclease XPF [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983144|gb|EDU48632.1| DNA repair endonuclease XPF [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 948
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 221/743 (29%), Positives = 359/743 (48%), Gaps = 116/743 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LEF Q I +L +E LVIL+ GL L +L+ ++L + + L+LL + + ++ +
Sbjct: 15 LEFQQDIFNQLREEDE--LVILARGLGLLRLVTNLLHSYDAAGNNLILLVGADDRENVWV 72
Query: 63 ------HYLAPNAPLLP--SEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
H NAP S + DL R LY+ G IF +T RILIVD L+ L
Sbjct: 73 GEALAEHAAVSNAPKCRGLSLVNTDLMSVGTREKLYAQGGIFSITSRILIVDFLSGLLNP 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GF+ +MK+L
Sbjct: 133 ETVTGIVVLHAERVVATSLEAFILRIYRQKNKTGFLKAFSDTPEPFTTGFSPLTNMMKNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+ K L+PRF V V+ LE R+ V+++ VPM+ M IQ A+L ++A + E++K N
Sbjct: 193 FLTKPALYPRFHVAVANSLEGRKKAEVIELEVPMTDAMQDIQNAVLSCVEASIGELKKAN 252
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++VED TV++ L K+FD+I+RRQLDP+WH KT+Q+V DL LR +L L+ YDAV
Sbjct: 253 PGLEVEDWTVDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLRTILHALLTYDAV 312
Query: 292 TYLKYLDTLRV--------SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ KYLDT+ ++ +S W+F +++ IF AK+RVY
Sbjct: 313 NFNKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIFTTAKRRVY--------------- 357
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK V N E +S + L+ VLEE PKW L E+L+EIE++ +
Sbjct: 358 --TGK------VSNAE---LANASNAVPESLQPVLEEFPKWAQLAEILQEIEQDAYFNPT 406
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQ 463
+++ +G +L+ C D+ G+ +RE L + ++
Sbjct: 407 P--------QDSSNGSILIMCGDQ------------GTASQLRE-----YLQTMYVKPEG 441
Query: 464 TSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDN 523
+ + ++ EP G ++ + + S VS AL + K N + +
Sbjct: 442 IADEDEEEYEPSGKFMMRRKLRNYLTWKRDFSKVSA----ALFSENQKAINTSTDKNAQS 497
Query: 524 PETYYGSKGPGRGRGKGRN---------RNGPACVPQSANKDSKSNSKAAIEDKPEISGS 574
+ P R + R R+ V + ++D+ S A + EI +
Sbjct: 498 GMRQTSGRPPPNKRRRVRGGGNAAAGPARSDTGAVRTAGDRDAHIASLMAELEPTEIEAA 557
Query: 575 GNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK----DSKPVPPVHFYA 630
G VG+ D ES D + VH Y+
Sbjct: 558 QKPGE--------VGFD-------------------PLDNMESYYELFDMNSLIVVHPYS 590
Query: 631 LESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAG 690
+ D+ ILD KP +V+Y PD +F+R+IEVY++ + +KV+F++Y S E Q++ +
Sbjct: 591 GDLDEHILDETKPRYVVMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQRYLSA 650
Query: 691 IRRENGAFESLIRQKSFMMIPID 713
+RRE AF LI++++ M + ++
Sbjct: 651 VRREKDAFTRLIKERANMALTMN 673
>gi|170108792|ref|XP_001885604.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639480|gb|EDR03751.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 994
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 219/752 (29%), Positives = 376/752 (50%), Gaps = 89/752 (11%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L +H+ I+ + L+IL+ GL L ++I +++ ++ Q +LL++++P +S
Sbjct: 3 LLLPYHKGILENIHDPATSELLILARGLGLRRIICTLMQIYDSPQNLVLLVNATPEEESG 62
Query: 61 IIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
I L P + + + R LY SG + VT RIL+VD+L +P + G
Sbjct: 63 IGEELGIMGCRRPGLRVVGYETASKERKNLYKSGGLISVTSRILVVDMLQSDIPIELITG 122
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
++I++ +T E FI R+ + N+ +++AF+D+P + SG + + IMK L +R +
Sbjct: 123 MLIMHAEQVTPLVLEAFIVRLYREKNKMGFVKAFTDQPEHITSGLSPLKNIMKELQLRTV 182
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVE 237
++PRF ++ + LER VV++ P+++ M I AI++ M+ L E++++N +D++
Sbjct: 183 RIYPRFHEDIKKSLERRRADVVELSQPLTEPMANIHHAIIQCMNTTLSELKRSNTTLDLD 242
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
D +VEN F+SFD I+RRQLD +WH +G KTKQLV+DL TLR+LL YL+ YD++ + YL
Sbjct: 243 DFSVENAYFRSFDIIVRRQLDVVWHKVGPKTKQLVNDLATLRRLLYYLLTYDSLQFHAYL 302
Query: 298 DTLRVSES---------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
+TL S + +S W+ +++ IF A++R Y + S + + +
Sbjct: 303 ETLIASNTTTPTGGTKQHQSPWMLTDAANIIFGVAERRCYTIS-STSKRVVPRVIDLVDD 361
Query: 349 KRKLKKVDNNEDEDGGTSS------TSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
+ +D E GG S T ++ VLEE PKW +L +V+ E+EEE ++Q
Sbjct: 362 EDAWDALDEAEGRVGGKSKEKEHKPTWVPDGMDPVLEELPKWNLLSDVILEVEEEIIRQQ 421
Query: 403 S-SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSE---------KVMREEWEKY 452
+ +R+ L +L+ +C L + + + K+M ++ Y
Sbjct: 422 TITRKPPTLGS-----NTILIMASSTKTCSLLTEFLSTMNHDAPSGTKGRKMMMQKLRVY 476
Query: 453 LLSKVQLRSVQTSSKKK----KSKEPKGYGILDGVAPVKIAQNAEASSVSK---QEHDAL 505
L K QL + + K + G G LDG+ QN + S K +E
Sbjct: 477 LWWKSQLLARKQEGKTHFAMPDTSRRAGDG-LDGL----YGQNDDISEGLKKKDKEKAER 531
Query: 506 LAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAI 565
+ +IR G + + ET S G R K R D S AA
Sbjct: 532 NQSRRRIRGGGPTSSSGSRETKTASVDLGPDRVKAR--------------DDFSEFWAAQ 577
Query: 566 EDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPP 625
D EGP + ++ + G LE F +V + +PP
Sbjct: 578 ADV-------GEGPIELCDMQLLDFGSGALEDEF---DVHYGL--------------LPP 613
Query: 626 -----VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYED 680
+ Y+ +SD +L ++P IV++ P+M F+R+IEVY++ +P + ++VY + YE+
Sbjct: 614 EETVLIRAYSDDSDDRMLAEIEPKFIVMFEPNMEFIRRIEVYRSSSPGLGVRVYHMIYEN 673
Query: 681 STEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
S E K+ AGIRRE +FE LI+++ M++P+
Sbjct: 674 SCEEHKYLAGIRREKESFERLIKERGTMLMPL 705
>gi|302499611|ref|XP_003011801.1| hypothetical protein ARB_02030 [Arthroderma benhamiae CBS 112371]
gi|291175354|gb|EFE31161.1| hypothetical protein ARB_02030 [Arthroderma benhamiae CBS 112371]
Length = 883
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 326/670 (48%), Gaps = 137/670 (20%)
Query: 88 LYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA 147
+YS G + VT RIL+VDLL++ L + G+IIL+ + S E FI RI + N++
Sbjct: 1 MYSEGGVISVTSRILVVDLLSRLLDPKLITGMIILHAEKVVATSLEAFIIRIYRQYNKDG 60
Query: 148 YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPM 206
++AFSD P +GFA ++++LF++K LWPRFQV V+E LE V+++ VPM
Sbjct: 61 MLKAFSDTPEPFTTGFAPLSNMLRNLFLQKTSLWPRFQVTVAESLEGHRKAEVIELEVPM 120
Query: 207 SKYMGGIQKAILEVMDACLKEMRKTNK-VDV-EDLTVENGLFKSFDEILRRQLDPIWHIL 264
+ M IQ A+LE ++ ++E++++N +DV +D TV++ L K+FD +RRQLDP+WH +
Sbjct: 121 TDKMKEIQNAVLECVEVNIRELKRSNTGLDVGDDWTVDSALHKNFDVAIRRQLDPVWHRV 180
Query: 265 GKKTKQLVSDLKTLRKLLDY--LVRYDAVTYLKYLDTLRVSESF--------RSVWIFAE 314
+T+Q+ SDL LR +L L+ +DAV+ KYLDT+ + S S W+F
Sbjct: 181 SFRTRQIASDLTVLRSILQLSSLLTFDAVSLNKYLDTVISAHSAPAGSTKQNYSPWLFLG 240
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
+++ +FD AK RVY+ KK K ++ D G +
Sbjct: 241 AAHVLFDTAKSRVYK------------------KKASEKTTSSSPDIFNG---------I 273
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQL- 433
E VLEE PKW VL EVL+EIE++ ++ G N+ +LV C D+ +C Q+
Sbjct: 274 EPVLEEQPKWAVLAEVLQEIEQDTYLNPAA------PGSSNN--AILVMCSDQQTCRQVR 325
Query: 434 --------------------------EDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSK 467
ED + ++ +MR + +YL K L +V
Sbjct: 326 EYLSTMHQREKSFDKNEDDETEIIPHEDERQPSADTMMRRKLREYLYWKRNLSNVNNHLY 385
Query: 468 KKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETY 527
K K KG + G + SSV+ Q H
Sbjct: 386 DVKPKT-KGIAEVPGFTSI--------SSVAPQGH------------------------- 411
Query: 528 YGSKGPGRGRGKGRNRNGPACVPQS-ANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSG 586
+G P + R R R G + S A + + + + ED PE+ E
Sbjct: 412 FGRAPPNKRR---RVRGGSSTASTSGAGRPAHGSVQVDTEDFPEVPNLSEE--------- 459
Query: 587 VVGYSGGMLETAFVEKEVQWKRSLKTDTA------ESKDSKPVPPVHFYALESDQPILDI 640
+++ A +E EVQ +L+ D E D + VH Y + D+ +L+
Sbjct: 460 -------VIQQAILE-EVQ-HITLEDDLQDMDNYYELYDVNDLLVVHHYDGDMDEHVLEE 510
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
L+P I++Y PD +F+R++EVY++ + ++VYF++Y +S E Q++ + +RRE AF
Sbjct: 511 LRPRYIIMYEPDAAFIRRVEVYRSSHQERNVRVYFMYYGESVEEQRYLSAVRREKDAFTK 570
Query: 701 LIRQKSFMMI 710
LI ++ M +
Sbjct: 571 LIHERGTMAM 580
>gi|392565718|gb|EIW58895.1| hypothetical protein TRAVEDRAFT_72315 [Trametes versicolor
FP-101664 SS1]
Length = 980
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 209/770 (27%), Positives = 370/770 (48%), Gaps = 123/770 (15%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L FH+ I+ ++ LV+++ GL L +++ +L ++ +LL++++ ++
Sbjct: 3 VLLPFHKSILEKIHDPATSELVLIARGLGLRRIVCKLLQIYDSPNNLILLVNATQEEEAA 62
Query: 61 IIHYLAPNAPLLPSE--ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
I L P + + R LY G + +T +I VD+LT +PT + G
Sbjct: 63 IGEELGIMGCRNPGLRIVGFETGRKDRQDLYKKGGLVSITSQIFTVDMLTSDIPTHLITG 122
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+++L++ +T + E FI R+ + N+ +++AFSD+P + SG + IMK L +R +
Sbjct: 123 ILVLHSERVTPTAAEAFIVRLYREKNKNGFLKAFSDQPEHITSGLSPLRTIMKELQLRTV 182
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVE 237
H++PRF ++ E L+R+ P +V++ M++ M I I++ M L E+++ N +D++
Sbjct: 183 HIYPRFHADIKESLDRKTPDIVELHQDMTEGMAEIHHGIVQCMTTTLAELKRANSTLDLD 242
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DL+++N F+SFD I+RR LDP+WH +G +TKQLV DL TLR+LL YL+ YDA+ + YL
Sbjct: 243 DLSIDNAYFRSFDMIVRRMLDPVWHKVGPRTKQLVGDLATLRRLLTYLLTYDALAFHAYL 302
Query: 298 DTLRVSES---------FRSVWIFAESSYKIFDYAKKRVYRFT----------------- 331
+TL + + +S W+ ++++ IF YAK+R Y
Sbjct: 303 ETLIAANTTADSGSARQHQSPWMLTDAAHTIFTYAKRRCYVMNPVPKAAAQVINLADDDD 362
Query: 332 --RSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLRE 389
+ E+ G+ +S G K K ++ +E VLEE PKW +L +
Sbjct: 363 EAWAALDEVEGRPRSQAGPSHKGK------EKAKAPRKKWLPEGMEPVLEELPKWYLLAD 416
Query: 390 VLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN-------GSE 442
+L EIE E ++ A LL + VL+ +C ++D + GS+
Sbjct: 417 ILHEIEGEAIRLAP-----LLSSQSPGTNTVLIMASSLHTCTLIKDFLATMKADAPRGSQ 471
Query: 443 --KVMREEWEKYLLSKVQLRSVQTSSK--------KKKSKEPKGYG--ILDGVAPVKIAQ 490
++M ++ YL K +L + + K KS G G + DGV
Sbjct: 472 GRRMMEDKLRLYLWWKGKLSERRAEGRGHFALPQAKDKSAPGAGRGAAVDDGV------- 524
Query: 491 NAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVP 550
+ ++ +++ + L A ++ R +G + P + GP G V
Sbjct: 525 ---SEALKRKDKERLERANNRRRIRGGAPATPAPTRDRTASGP----------LGEVVVK 571
Query: 551 QSAN--------KDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEK 602
Q A+ + + ++A I D P + + + H G++ +L
Sbjct: 572 QEADDIADFLSTQGVDAAAEALISDVPLFTMDDDF----DAHYGLLAPEQTVL------- 620
Query: 603 EVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVY 662
V YA ++D +L +KP IV+Y P++ F+R+IEVY
Sbjct: 621 -----------------------VRAYADDTDDQVLQEVKPRFIVMYEPNLEFIRRIEVY 657
Query: 663 KAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
+ NP + ++VYF+ Y+ S E K+ G+RRE +FE LIR++ M++PI
Sbjct: 658 RNSNPGLGVRVYFMMYKMSCEEGKYLTGLRREKESFERLIRERGTMLMPI 707
>gi|393226773|gb|EJD34490.1| hypothetical protein AURDEDRAFT_188995 [Auricularia delicata
TFB-10046 SS5]
Length = 984
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 217/762 (28%), Positives = 361/762 (47%), Gaps = 110/762 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L F I+ + L +++ GL L ++ ++L +++ Q +LL+++S + ++ I
Sbjct: 5 LLPFQTSIVQTTMDPLTSELTLIARGLGLRTVLCTLLKIYNSPQTLVLLMNASQDEENGI 64
Query: 62 IHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
H L P +T ++ R LY G I VT RIL+ D+LT +P + GL
Sbjct: 65 GHLLGLMGCRNPGLRVVTYEMNRKERRDLYKGGGIISVTSRILVGDMLTDDVPRELITGL 124
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++L+ +T S E FI + + N++ +++AFSD+P + G + IMK+L +RK+
Sbjct: 125 LLLHAEKVTAESQEAFIISLYREKNQDGFLKAFSDQPEQITHGLSPLRTIMKALRLRKVQ 184
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
++PRF V + LER VV++ PM++ M I +AI+ M+A + E++++N +D++D
Sbjct: 185 IFPRFHEEVQQSLERRKADVVELHQPMTEAMTEIHEAIMLCMNATISELKRSNSTLDLDD 244
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LT+EN F+ FD I+R+QLDP+WH +G KTKQLV DL TLR LL +L+ YDA+ YL+
Sbjct: 245 LTLENAYFRMFDAIVRKQLDPVWHKVGPKTKQLVGDLTTLRNLLGFLLSYDALALHTYLE 304
Query: 299 TLRVSESF----------RSVWIFAESSYKIFDYAKKRVYRFTRS--------------- 333
++ S + +S W+F +++ + AK R Y T +
Sbjct: 305 SIIHSNTVSNATGEKRQNQSPWLFLDAADLMIKAAKGRCYITTEAFRPRAPLPASALDWD 364
Query: 334 --DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL 391
+G + + VT R L D +G +E VLEE PKW +L VL
Sbjct: 365 DEEGWAALQELEGVTPAPR-LPDKDKKWLPEG----------MEPVLEELPKWPLLVAVL 413
Query: 392 EEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV------- 444
+EIEE + Q L + VLV + +C QL + + + ++
Sbjct: 414 QEIEETMMAQP-------LPPQSPASDTVLVMASSQRTCDQLREYLGSMDPRLPAGQQGR 466
Query: 445 --MREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEH 502
M +YL K +L ++ +E + +A S
Sbjct: 467 AMMERRLREYLRWKARLH--------ERDRERR-------------NGSASGSGNGAAGG 505
Query: 503 DALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSK 562
D L+ A K ++ K + N G PG + R+ + Q+ N +S+
Sbjct: 506 DG-LSEAMKRKDAAKQNRALNRRRVRGG-APGTQPAR-RDPEAEGAMSQAGNMMDESD-- 560
Query: 563 AAIEDKPEISGSGNEGPADEIHSGVVGYSGGML----ETAFVEKEVQWKRSLKTDTAESK 618
+ED G G+ G GGM+ E FV ++ SL D
Sbjct: 561 -VVEDFLATQG------------GINGDLGGMVTLDEEDDFVGLQLATAASLSGDNTFLP 607
Query: 619 DSKP-----VPP-----VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPS 668
D V P V Y+ ++D +L +KP IV++ P+ F+R+IEVY++ +P
Sbjct: 608 DDDEQWYGLVAPEQTVLVRAYSDDADDQLLAEVKPRFIVMFEPNQEFIRRIEVYRSLSPG 667
Query: 669 IKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
+ ++VYF+ YE S E K+ IR+E FE LI+++ M++
Sbjct: 668 LAVRVYFMLYEKSAEEVKYLTAIRKEKDCFERLIKERGSMLM 709
>gi|46128561|ref|XP_388834.1| hypothetical protein FG08658.1 [Gibberella zeae PH-1]
Length = 912
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 208/739 (28%), Positives = 343/739 (46%), Gaps = 146/739 (19%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
LE+ Q + EL E LV+++ GL L +L+ ++L + + L+++ + +
Sbjct: 16 LEYQQSLFQELRAEDE--LVVIARGLGLMRLVNNLLHSYDAAGNNLIVVVGADDRENGWI 73
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L ++P A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISMSPKARGLTVVNTDSQSVGAREKMYTKGGIFSITSRILVVDLLTSLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ESITGLVVLHADRVIATSLEAFILRVYRQKNKIGFLKAFSDNPDPFTTGFSPLATMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI MDA
Sbjct: 194 FLRKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMRDIQTAI---MDA--------- 241
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
L K+FD I+RRQLDP WH + KTKQ+V+DL LR +L+ ++ YDAV+
Sbjct: 242 ------------LLKNFDVIVRRQLDPNWHRVSWKTKQIVNDLTVLRGMLNSILSYDAVS 289
Query: 293 YLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKS 344
+L++LDT+ + S +S W+F +++ IFD A++RVY
Sbjct: 290 FLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQTIFDTARRRVY---------------- 333
Query: 345 VTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASS 404
+ R + DN + L VLEE PKW +L EVLEEI+ + +
Sbjct: 334 -SASARDAAREDNIDS-------------LRPVLEELPKWALLAEVLEEIDRDLYFEPPV 379
Query: 405 REEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN-----GSEKVMREEWE---KYLLSK 456
R++ +G +LV C + +C QL D ++ +EK + E+ E K +
Sbjct: 380 RDD--------SNGTILVMCSNTDTCRQLRDFLQTMHVKPKTEKRVSEDEEDEDKRSAAF 431
Query: 457 VQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQG 516
+ R ++ K K+ Q A+ S+ E+ L A+ R
Sbjct: 432 MMRRRLRNYLKWKR-------------------QFAQISATLFSENQKALNGATDTR--- 469
Query: 517 KSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGN 576
+ G +G K R G S + + IE E++
Sbjct: 470 --------PGFGGLRGGKAPANKRRRMRGGGNAGTSMGRAENGSIMQYIEKPREVADL-- 519
Query: 577 EGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHFY 629
M E E+E Q K + +D ++ D + + VH Y
Sbjct: 520 -----------------MAEVQITEEEAQQKEEVVSDPLDNMEEYFKMYDMQDLVVVHAY 562
Query: 630 ALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKA 689
+ D+ +L+ KP I++Y PD +F+R++EVY++ + ++VYF++Y S E QK+ +
Sbjct: 563 DGDQDEHVLEETKPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQKYLS 622
Query: 690 GIRRENGAFESLIRQKSFM 708
+RRE AF +I++++ M
Sbjct: 623 SVRREKDAFTKVIKERASM 641
>gi|302920997|ref|XP_003053194.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734134|gb|EEU47481.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 916
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 207/730 (28%), Positives = 347/730 (47%), Gaps = 131/730 (17%)
Query: 4 EFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII- 62
E+ Q++ EL E LV+L+ GL L +LI ++L + + L+++ + + ++ I
Sbjct: 22 EYQQNLFQELRAEDE--LVVLARGLGLMRLINNLLHSYDAAGNNLIVIVGADDRENGWIG 79
Query: 63 HYLAPNAPLLPSE-------ITADLPA-NHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
LA +A + S + DL + R +Y+ G IF +T RIL+VDLLT L
Sbjct: 80 EALAEHAAISMSPKARGLTVVNTDLQSVGAREKMYAGGGIFSITSRILVVDLLTSLLNPE 139
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
++ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M++LF
Sbjct: 140 SITGLVLLHADRVVATSLEAFILRVYRQKNKVGFLKAFSDNPDPFTTGFSPLATMMRNLF 199
Query: 175 IRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
+RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E C
Sbjct: 200 LRKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMREIQNAIME----C--------- 246
Query: 234 VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
VEN FD ++RRQLDP WH + KTKQ+V+DL LR +L+ ++ YDAV++
Sbjct: 247 -------VEN-----FDVMVRRQLDPNWHRVSWKTKQIVNDLTVLRTMLNSILTYDAVSF 294
Query: 294 LKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSV 345
L++LDT+ + S +S W+F +++ IFD A++RVY T D
Sbjct: 295 LQHLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTIFDTARRRVYSATAKDAAR-------- 346
Query: 346 TGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
++N D L VLEE PKW +L EVLEEI+ + + +
Sbjct: 347 ----------ESNIDS------------LRPVLEELPKWSLLAEVLEEIDRDLYFEPPVK 384
Query: 406 EEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTS 465
++ +G +L+ C D +C QL D ++ K E+ +
Sbjct: 385 --------DDSNGSILIMCSDTDTCRQLRDFLQTMHVKPKTEK--------------KPD 422
Query: 466 SKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPE 525
++ + +P ++ + + + VS A L A ++ G +D
Sbjct: 423 DDEEDADKPSAAFMMRRRLRNYLRWKRQFAQVS-----ATLFAENQKALNGATDSRPGMG 477
Query: 526 TYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHS 585
+ G K P R + R G V S + + IE E++
Sbjct: 478 GHRGGKAPANKRRRMR---GGGNVGPSMGRAENGSIMQYIEKPGEVADL----------- 523
Query: 586 GVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHFYALESDQPIL 638
M E E+E Q K + D ++ D + + H Y + D+ +L
Sbjct: 524 --------MAEVQLTEEEAQQKEEVIADPLDNMEDYFQLYDMQDLIVAHAYDGDQDEHVL 575
Query: 639 DILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAF 698
+ +KP I++Y PD +F+R++EVY++ + ++VYF++Y S E QK+ + +RRE AF
Sbjct: 576 EEVKPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQKYLSSVRREKDAF 635
Query: 699 ESLIRQKSFM 708
LI++++ M
Sbjct: 636 TKLIKERASM 645
>gi|358393642|gb|EHK43043.1| hypothetical protein TRIATDRAFT_149406 [Trichoderma atroviride IMI
206040]
Length = 925
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 208/732 (28%), Positives = 341/732 (46%), Gaps = 121/732 (16%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL E LVIL+ GL +L+ ++L + + L++L + ++ +
Sbjct: 16 LEYQQQLFQELRAEDE--LVILARGLGQMRLVTNLLHSYDAAGSNLIVLVGADERENNWV 73
Query: 63 -HYLAPNAPLLPSEITADLPA--------NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S L R +Y++G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISASPKARGLTVVNTDSQTVGAREKMYANGGIFSITSRILVVDLLTGLLSP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ELITGLVVLHADRIVATSLEAFILRVYRQKNKVGFLKAFSDNPDPFTTGFSPLTTMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRF V V++ LE R+ V+++ VPM+ M IQ AI+E C
Sbjct: 194 FLKKASLWPRFHVAVAQSLEGRKKAEVIELEVPMTDSMTDIQNAIME----C-------- 241
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
VEN FD I+RRQLDP WH + KT+Q+V+DL LR LL ++ YDAV+
Sbjct: 242 --------VEN-----FDVIVRRQLDPNWHRVSWKTRQIVNDLTILRGLLSNILTYDAVS 288
Query: 293 YLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKS 344
+L++LDT+ + S +S W+F +++ IFD A++RVY
Sbjct: 289 FLQHLDTIHAAHSPPPGSTRQSQSPWLFLDAAQTIFDTARRRVY---------------- 332
Query: 345 VTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASS 404
+ + + + N D L VLEE PKW +L EVLEEI+ + + +
Sbjct: 333 -SASPKNVSQSGENIDS------------LRPVLEELPKWGILAEVLEEIDRDLFFEPKA 379
Query: 405 REEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQT 464
R++ +G +L+ C + +C QL D L+++
Sbjct: 380 RDD--------SNGGILIMCSNTDTCRQLRDY----------------------LQTMHV 409
Query: 465 SSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNP 524
K K K P + A+ A+ + +++ L + S +N
Sbjct: 410 KPKVDKEKLPVVDDPEFERERTEEARRPSANFMMRRKLRNYLRWKRQFAQVSASLFAENQ 469
Query: 525 ETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIH 584
+ G+ P G G R P ANK + A+ + G + G +
Sbjct: 470 KALNGASDPRPGHGGLRGGKAP------ANKRRRMRGGAS---SMAMYGRTDNGSIAQYF 520
Query: 585 SGVVGYSGGMLETAFVEKEV-QWKRSLKTDTAESKDS-------KPVPPVHFYALESDQP 636
+ M E E+E Q K + D E + + + VH Y + D+
Sbjct: 521 EKPAEVADLMAEVQITEEEAQQQKEDIIADPLEDMEDYYQLFEMQDLVVVHAYDGDQDEH 580
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q++ + +RRE
Sbjct: 581 VLEEVKPRYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSSVRREKD 640
Query: 697 AFESLIRQKSFM 708
AF LI++++ M
Sbjct: 641 AFTKLIKERASM 652
>gi|452987483|gb|EME87238.1| hypothetical protein MYCFIDRAFT_212808 [Pseudocercospora fijiensis
CIRAD86]
Length = 953
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 208/737 (28%), Positives = 342/737 (46%), Gaps = 106/737 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS---PSQGTLLLLSSSPNLKS 59
LEF Q I EL E V+L L L LLHS ++L+ +
Sbjct: 24 LEFQQDIFHELRDED----VLLVLARGLGLLRLVTNLLHSYDAAGHNLVILVGADDREND 79
Query: 60 QIIHYLAPNAPLLPSE-------ITADLP-ANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
I LA +A + S + D+ R +Y G I +T RILIVD L+ L
Sbjct: 80 WIGESLAEHAAVSGSPKCRGMQLVNTDMTNVGSREKMYKGGGICSITSRILIVDFLSGLL 139
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ + GL+IL+ + S E FI RI + N++ +++AFSD+P +G+ I++
Sbjct: 140 DPATVTGLVILHADRVAATSLEAFIVRIYRQKNKKGFLKAFSDQPEPFTTGYQPLTSILR 199
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK L+PRF V V++ LE + V+++ VPM+ M IQ A+LE ++ + E++K
Sbjct: 200 NLFLRKPILYPRFHVTVAKSLEGKRKAEVIELEVPMTDAMRDIQNAVLECVEVSISELKK 259
Query: 231 TN--KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
N +++ED +++ L +SFD I+RRQLDP+WH + +TK +V DL LR +L L+
Sbjct: 260 MNTGTIEMEDWNLDSALHRSFDSIVRRQLDPVWHRVSFRTKMIVRDLTMLRTILHSLLTL 319
Query: 289 DAVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNG 340
+AV + KYLDT+ + S S W+F ++++ +FD AK+RVY
Sbjct: 320 NAVDFNKYLDTVLAASSPPPNSSRKDVSPWLFLDAAHTLFDSAKRRVY------------ 367
Query: 341 QSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLK 400
TGK G +T+ + L VLEE PKW +L E+LEEIE +
Sbjct: 368 -----TGKIAD------------GPIATAEQDGLHPVLEELPKWALLAEILEEIERDTYF 410
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLR 460
+E G +L+ C D+ +C QL + + + MR+E E
Sbjct: 411 NPRPDDE--------SSGAILIMCADQGTCRQLREYL-----QTMRQEAE---------- 447
Query: 461 SVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD 520
+ ++++E + + + + + D + S K D
Sbjct: 448 ------EDRRAREADEVDDGESKVSARYMMRRKLRYYLQWKRDFAKVSNSLFAANEKEID 501
Query: 521 GDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPA 580
G + + GP RG+ NK + + P + G G A
Sbjct: 502 GTAKKLH----GPQANRGRA-----------PPNKRRRVRGGGDVGAGPGRTAMGAVGVA 546
Query: 581 DEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALES 633
+ S + + T F E K L D + D K + +H Y +
Sbjct: 547 GDKDSHIQALIQDLDRTNFTEDNTAAKVDLGADPLDDMDDYYELYDMKDLVLIHPYDGDM 606
Query: 634 DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRR 693
D +L+ +KP +++Y PD +F+R+IEVY++ + + +++VYF++Y S E Q++ + +RR
Sbjct: 607 DDHLLEEIKPRYVIMYEPDAAFIRRIEVYRSSHSNRQVRVYFMYYGGSVEEQRYLSAVRR 666
Query: 694 ENGAFESLIRQKSFMMI 710
E +F LIR++ M +
Sbjct: 667 EKDSFTRLIRERGNMAM 683
>gi|340521650|gb|EGR51884.1| DNA repair protein [Trichoderma reesei QM6a]
Length = 931
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 218/734 (29%), Positives = 352/734 (47%), Gaps = 119/734 (16%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS-PSQGTLLLLSSSPNLKSQ- 60
LE+ Q + EL E LVIL+ GL +++ + LLHS + G+ L++ N +
Sbjct: 16 LEYQQQLFQELRAEDE--LVILARGLGQMRIVTN--LLHSYDAAGSNLIVVVGANERENN 71
Query: 61 -IIHYLAPNAPLLPSEITADLPANH--------RHTLYSSGQIFFVTPRILIVDLLTQRL 111
I LA +A + S L + R +Y++G IF +T RIL+VDLLT L
Sbjct: 72 WIGEALAEHAAISASPKARGLTVVNTDSQTVAAREKMYANGGIFSITSRILVVDLLTGLL 131
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ G+I L+ + S E FI R+ + N+ +++AFSD P +GF+ +M+
Sbjct: 132 NPELITGIIALHADRIIATSLEAFILRVYRQKNKIGFLKAFSDNPDPFTTGFSPLATMMR 191
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF++K LWPRF V V++ LE ++ V+++ VPM+ M IQ AI MDA
Sbjct: 192 NLFLKKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMRDIQNAI---MDA------- 241
Query: 231 TNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
L K+FD ++RRQLDP WH + KT+Q+V+DL LR LL ++ YDA
Sbjct: 242 --------------LLKNFDVLVRRQLDPNWHRVSWKTRQIVNDLTILRGLLSNILTYDA 287
Query: 291 VTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V++L++LDT+ + S +S W+F +++ IFD A++RVY +
Sbjct: 288 VSFLQHLDTIHAAHSPPPGSTRQSQSPWLFLDAAQTIFDTARRRVY----------SASP 337
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
KSV+ + E+ D L VLEE PKW +L EVLEEI+ + +
Sbjct: 338 KSVS---------QSGENIDS----------LRPVLEELPKWGILAEVLEEIDRDLFYEP 378
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV 462
R++ +G +L+ C + +C QL D ++ K + ++ ++
Sbjct: 379 QVRDD--------SNGGILIMCSNTDTCRQLRDYLQTMHVKPKNVDRDRLSVADDPELER 430
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGD 522
+ + + K P +L + + + VS A L A ++ G +D
Sbjct: 431 ERAEEAHK---PSANFMLRRKLRNYLRWKRQFAQVS-----ATLFAENQKALNGATD--- 479
Query: 523 NPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADE 582
PG G G R G A ANK ++ I +SG + G +
Sbjct: 480 --------ARPGHG---GSLRGGKA----PANKRRRTRGGGNIGGSMIMSGRADNGSIAQ 524
Query: 583 IHSGVVGYSGGMLETAFVEKE-VQWKRSLKTDTAESK-------DSKPVPPVHFYALESD 634
+ M E E+E +Q K + D E+ D + + VH Y + D
Sbjct: 525 YFEKPGEVADLMAEVQITEEEALQQKEDIAADPLENMEDYYQLYDMQDLVIVHAYDGDQD 584
Query: 635 QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRE 694
+ +L+ +KP I++Y PD SF+R++EVY++ + +KVYFL+Y S E Q++ + +RRE
Sbjct: 585 EHVLEEVKPRYIIMYEPDASFIRRVEVYRSSHNDRNVKVYFLYYGGSVEEQRYLSSVRRE 644
Query: 695 NGAFESLIRQKSFM 708
AF LI++++ M
Sbjct: 645 KDAFTKLIKERASM 658
>gi|353241018|emb|CCA72858.1| related to RAD1-component of the nucleotide excision repairosome
[Piriformospora indica DSM 11827]
Length = 921
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 191/673 (28%), Positives = 331/673 (49%), Gaps = 93/673 (13%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
+T ++ R LY G + VT RIL+VD+L + +P + G+++L+ ++ STE F
Sbjct: 49 VTFEMDRAERRNLYRQGGLISVTSRILVVDMLLEDIPIDFIGGMVVLHAEKVSPQSTEAF 108
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE 195
I R+ + N + +I+AF+D+P + GF+ + +MK L +R +H++PRF +V L R
Sbjct: 109 IIRLYRQKNSKGFIKAFTDEPENLTVGFSPLKDVMKELQLRNVHIFPRFHEDVKRSLTRR 168
Query: 196 PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILR 254
V+ + VPM+ M I AI++ + A L +++++N +++++DL V++ F++FD I R
Sbjct: 169 KADVIQLAVPMTPNMKDIHGAIIQCIVATLSDLKRSNTELNLDDLDVQSAYFRNFDLIAR 228
Query: 255 RQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF-------- 306
+QL+ +WH +G +TKQLV DL TLR+LL YL+ YD +++ Y++T+ S S
Sbjct: 229 KQLNSVWHRVGFRTKQLVGDLATLRRLLIYLLSYDPISFQTYIETIIASNSTTASGRPYH 288
Query: 307 -RSVWIFAESSYKIFDYAKKRVYRFT---------RSDGVELNGQSKSVTGKKRKLKKVD 356
RS W+ ++ ++ IF A++R + T R D ++ + G + K +
Sbjct: 289 DRSAWLSSDPAHIIFQAARRRCFVSTKAKTPNQPSRDDAWDVLDEVDGTIGAPVRPKWLP 348
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+N +E VLEE PKW+ L E+L EIE+ ++ + E
Sbjct: 349 DN---------------IEPVLEELPKWEYLSEILTEIEDLSMRHP-------IPQENPG 386
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
VL+ C E +C ++ + YL + L T +K +
Sbjct: 387 SNAVLIMCSSERTCTEIRE----------------YLSTINPLAEPGTKGRKFMETRLRS 430
Query: 477 Y----GILDGVAPVKIAQNAEASSVSKQE---HDALLAAASKIRNQGKSDDGDNPETYYG 529
Y G L G + A N + +V K+ D ++ A K +N
Sbjct: 431 YLYWKGRLGGSG--QKAGNDGSEAVQKEPAAGQDDGISEALKRKN--------------- 473
Query: 530 SKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVG 589
++ R + R R GPA + + ++ ++ AI+ G EG E +
Sbjct: 474 ARMKERQASRRRVRGGPA----NMVVEGRTPTERAIDPNARSGAMGGEGVVKEEADELAL 529
Query: 590 YSGGMLETA---FVEKEVQWKR-SLKTDTAESKDSKPVPP----VHFYALESDQPILDIL 641
+ G ET FV Q + +L+ D + P V Y+ ++D +L L
Sbjct: 530 FFDGQDETTNTVFVPDVGQLTQMALEADDFDEHYGLVQPEQLIIVRSYSDDTDDRVLSDL 589
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
P I+++ P++ FVR+IEVYKA NP + ++VY ++ S E + + A +RRE AFE L
Sbjct: 590 MPRFIILFEPNLQFVRRIEVYKASNPGLTVRVYIQVWDTSAEEEMYLAEMRREKEAFEHL 649
Query: 702 IRQKSFMMIPIDQ 714
IR+++ M++ I +
Sbjct: 650 IRERASMVLVIQE 662
>gi|115386690|ref|XP_001209886.1| hypothetical protein ATEG_07200 [Aspergillus terreus NIH2624]
gi|114190884|gb|EAU32584.1| hypothetical protein ATEG_07200 [Aspergillus terreus NIH2624]
Length = 890
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 188/619 (30%), Positives = 301/619 (48%), Gaps = 100/619 (16%)
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ G+I+L+ + S E+FI R+ + N+ +++AFSD P +GFA +++LF+
Sbjct: 49 ITGMIVLHADKIVATSIESFIIRVYRQENKRGFLKAFSDSPEPFTTGFAPLANSLRNLFL 108
Query: 176 RKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK- 233
RK LWPRF V V+E LE V+++ VPMS M IQ A+LE ++ C+ E++K N
Sbjct: 109 RKASLWPRFHVTVAESLEGHRKAEVIELEVPMSDKMREIQNAVLECVEICIGELKKANTG 168
Query: 234 VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
+D+ED T+++ L +SFD +RRQL+P+WH L KTKQ+VSDL LR +L L+ YDAV++
Sbjct: 169 LDMEDWTLDSALHRSFDISVRRQLEPMWHRLSFKTKQIVSDLSDLRAILHALLTYDAVSF 228
Query: 294 LKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSV 345
+KYLDT+ + S S W+F ++++ +F AK R Y+ S+ V
Sbjct: 229 VKYLDTIVTAHSPPPGSTRHNYSPWLFLDAAHILFQTAKSRAYQGKISNDV--------- 279
Query: 346 TGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
+SSTS L+ VLEE PKW+VL EVLEEIE + S+
Sbjct: 280 -----------------ARSSSTSLPTTLQPVLEEQPKWEVLAEVLEEIETDAYLNPSNV 322
Query: 406 EEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTS 465
+E + VL+ C D+ +C QL + + ++
Sbjct: 323 DE--------SNSTVLIMCADQRTCRQLREYLSTMHTRI--------------------- 353
Query: 466 SKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPE 525
+G G D VKI +AE + ++ L + + N K+
Sbjct: 354 --------DEGGGNDDANEDVKIKPSAEV--MLRRRLREYLDWKTSLSNVNKN------- 396
Query: 526 TYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHS 585
+ P + RN PA + Q A + N + + +S + P + +
Sbjct: 397 --LSAAPPASDNQSEKGRNSPAPLNQQAR--APPNKRRRVRGGGTVSSASGRVPNASVQT 452
Query: 586 GV-----VGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHFYALES 633
V V L+ VE E Q K + D E D + VH Y +
Sbjct: 453 DVELPDQVAELRDELQPTEVE-EAQ-KADIIIDDLEDMEEFYELYDMNDLVMVHPYDGDM 510
Query: 634 DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRR 693
D+ IL+ ++P I++Y P+ SF+R++EVY++ + ++VYF++Y S E Q++ + +RR
Sbjct: 511 DEHILEEVRPRYIIMYEPEPSFIRRVEVYRSSHVGRNVRVYFMYYGGSVEEQRYLSAVRR 570
Query: 694 ENGAFESLIRQKSFMMIPI 712
E +F LI++K M + I
Sbjct: 571 EKDSFTKLIKEKGNMAVTI 589
>gi|351701246|gb|EHB04165.1| DNA repair endonuclease XPF [Heterocephalus glaber]
Length = 877
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 254/454 (55%), Gaps = 55/454 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL A LL H G ++ LK +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLG-----ADRLLYHFLRLGEEYFIN---QLKIEG 64
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+ +L P +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G+++
Sbjct: 65 VDHL-------PRRVTNEIASNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGILV 117
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
H + E+ E FI R+ + N+ +I+AF+D A F +M++LF+RKL+LW
Sbjct: 118 YRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDGFF-----LMRNLFVRKLYLW 172
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
PRF V V+ LE P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL+
Sbjct: 173 PRFHVAVNSFLEHHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKSHNPSLEVEDLS 232
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
+EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++L
Sbjct: 233 LENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESL 292
Query: 301 RVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E +F S W+F +SS +F A+ RVY + ++ K + +K++
Sbjct: 293 RATEKAFGQNSGWLFLDSSTSMFINARARVYHIPDA----------KMSKKSKMPEKMEI 342
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E ++ E VLE PKW+ L EVL+EIE A ++E L G
Sbjct: 343 KEGQETKK---------ELVLENNPKWEALTEVLKEIE------AENKESEALGGP---- 383
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL+D + G+E + + + K
Sbjct: 384 GQVLICASDDRTCSQLKDYLTAGAEAFLLQLYRK 417
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 18/112 (16%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVI--VVYHPDMSFVRQI 659
K ++ +L +D A +P+ +H P+L P+ + V++ + FV
Sbjct: 509 KHEEFDLNLSSDAAYGLLKEPLTILH--------PLLGCSDPYALTRVLHEVEPRFVV-- 558
Query: 660 EVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
+Y AE L VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 559 -LYDAE-----LTVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 604
>gi|148745634|gb|AAI42632.1| ERCC4 protein [Homo sapiens]
Length = 372
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 210/334 (62%), Gaps = 7/334 (2%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 253 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 312
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRF 330
LR +E +F S W+F +SS +F A+ RVY
Sbjct: 313 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHL 346
>gi|327287573|ref|XP_003228503.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF-like
[Anolis carolinensis]
Length = 847
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 225/396 (56%), Gaps = 35/396 (8%)
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I H N LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P + G++
Sbjct: 9 IDHLRTENVAHLPQRVTNEVASNRRYQVYTGGGVLFATSRILVVDFLTDRIPADLITGIL 68
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N++ +I+AF+D A +GF ER+M++LF+RKL L
Sbjct: 69 VYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMRNLFVRKLFL 128
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V LE+ P VV++ V M+ M IQ +IL++++AC++E+++ + ++ EDL
Sbjct: 129 WPRFHAVVHSFLEQHKPEVVEMHVTMTPAMRAIQSSILDILNACVRELKQCHPALEAEDL 188
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K+FD+ +R LDP+WH LG KTK LV DL LR LL YL +YD VT+L L++
Sbjct: 189 SLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLNILRTLLWYLTQYDCVTFLNLLES 248
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLK-KV 355
LR SE +F S W+F +SS +F A+ RVY + G KKRK +
Sbjct: 249 LRASEKAFGRNSGWLFLDSSTSMFLNARSRVYCLPKGKG-----------NKKRKASDQT 297
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN 415
D E+ + E VLE PKW+ L VL+EIE E + E L
Sbjct: 298 DVMEEREQKR---------ELVLESNPKWEALTNVLKEIEAE-----NENSEAL-----G 338
Query: 416 DHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL++ I G+E + + K
Sbjct: 339 GPGRVLICASDDRTCAQLKEYITVGAEAFLTRLYNK 374
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
IL ++P +V+Y +++FVRQ+E+YKA P I L+VYFL Y STE Q++ +R+E
Sbjct: 500 ILHEVEPRYVVLYDAELTFVRQLEIYKASRPGIPLRVYFLIYGGSTEEQRYLTTLRKEKE 559
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M IP
Sbjct: 560 AFEKLIREKANMGIP 574
>gi|118142857|gb|AAH20741.1| ERCC4 protein [Homo sapiens]
Length = 356
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 210/334 (62%), Gaps = 7/334 (2%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 4 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 61
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 62 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 121
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 122 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 181
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 182 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 241
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 242 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 301
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRF 330
LR +E +F S W+F +SS +F A+ RVY
Sbjct: 302 LRATEKAFGQNSGWLFLDSSTSMFINARARVYHL 335
>gi|196009055|ref|XP_002114393.1| hypothetical protein TRIADDRAFT_50503 [Trichoplax adhaerens]
gi|190583412|gb|EDV23483.1| hypothetical protein TRIADDRAFT_50503 [Trichoplax adhaerens]
Length = 846
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 248/451 (54%), Gaps = 74/451 (16%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + I +LL E GLVI++ GL + +++ + L L+ + +L+L++S +
Sbjct: 8 LLEFDRQIFLDLLNE--DGLVIMAKGLGVDRMMLNFLKLYCSPKSFVLVLNTSNYQEEYF 65
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L A N L+P IT+ + R +Y G + FVTPRIL+VD+L++R+P + G+I
Sbjct: 66 IEELKAHNVDLIPKIITSQYSSIEREEIYLQGGVLFVTPRILVVDMLSKRVPIHLINGII 125
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +++AFSD P+ SGF++ E++MK+LF+RKL L
Sbjct: 126 VAKAHKMIESYQEAFITRLYRQNNKNGFVKAFSDAPSTFTSGFSQVEKVMKNLFVRKLFL 185
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V+ LE+ VV++ +PM+K+M IQ AI++++ CLKE++K N +D DL
Sbjct: 186 WPRFHATVTGCLEKHKVDVVELLIPMTKHMVTIQTAIIDIIYTCLKELKKGNPSLDTSDL 245
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
VEN + ++FD I++ QL+PIWH L KTKQL+ DLK LR L+ +L +YD +T+L YL++
Sbjct: 246 VVENAMSQAFDNIVKVQLEPIWHQLSGKTKQLIDDLKMLRLLILFLTQYDCITFLNYLES 305
Query: 300 LRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
+R + + S+W+F +S+ +F
Sbjct: 306 VRTNGTRLNKYSLWLFLDSTNVLF------------------------------------ 329
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
L+ +LE PKW +L ++LEEI++ R
Sbjct: 330 ----------------TLDTLLEPNPKWSLLTKILEEIKDMDCNSEEKR----------- 362
Query: 417 HGIVLVACKDECSCMQLEDCIRNGS-EKVMR 446
VL+ DE +C Q+++ + +G E +MR
Sbjct: 363 ---VLICALDERTCYQIKNYLIHGEREALMR 390
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L L P +++Y P++ FVRQ+EV+KA P +L+VYF Y S E QK+ +R+E
Sbjct: 497 VLTSLNPRFVILYDPELVFVRQLEVFKASRPGQQLRVYFTMYSSSAEEQKYLTALRKEKE 556
Query: 697 AFESLIRQKSFMMIP 711
AFE+LIR+K+ M+IP
Sbjct: 557 AFETLIREKAAMVIP 571
>gi|403418622|emb|CCM05322.1| predicted protein [Fibroporia radiculosa]
Length = 1024
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 219/803 (27%), Positives = 373/803 (46%), Gaps = 156/803 (19%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ ++ L++L+ GL L +++ +L ++ ++L+S+SP +S I
Sbjct: 4 LLSFHKDILEKIHDPSTSELILLARGLGLRRIVCKLLQIYDSPNNLVILVSASPEEESAI 63
Query: 62 IHYLA------PNAPLLPSE-------ITADLPA----NH--RHTLYSSGQIFFVTPRIL 102
L P ++ E + LP H R LY G + +T +IL
Sbjct: 64 GEELGILGCRKPGLRIVGFETHKKDRYVMCILPVFLIPEHAWRQNLYKKGGLISITSQIL 123
Query: 103 IVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSG 162
VD+L+ + T + G+++L+ +T S E FI R+ + NR+ +++AFSD P + SG
Sbjct: 124 TVDMLSSDISTEMITGIVLLHAEKVTPTSAEAFIVRLFREKNRDGFLKAFSDHPEHITSG 183
Query: 163 FAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMD 222
+ ++K L IR +H++PRF V + L+ + P +V++ M++YM I AI++ M
Sbjct: 184 MSPLRTVLKELQIRNVHIYPRFHVEIKNSLDLKRPDLVELHQNMTEYMAEIHHAIVQCMT 243
Query: 223 ACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKL 281
L E+++ N +D++DL ++N F+SFD I+RR LDP+WH +G +TKQLV+DL TLR+L
Sbjct: 244 TTLAELKRANTALDLDDLNIDNAYFRSFDMIVRRLLDPVWHKVGPRTKQLVNDLATLRRL 303
Query: 282 LDYLVRYDAVTYLKYLDTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTR 332
L +L+ YDA+ + YL+TL S + +S W+ +++ IF YAK+R Y +
Sbjct: 304 LTFLLTYDALAFHAYLETLIASNTTNESGAPRKNQSPWLLTDAANVIFQYAKRRCYTISA 363
Query: 333 SDGVELNGQSKSVTGKKRKLKKVDNNEDE--------------------------DGGTS 366
S LN + ++D++ED DG
Sbjct: 364 SAQKALNTAPPQI--------ELDDDEDAWAALDELEGRARVPTRSEVHGASNAPDGPQR 415
Query: 367 STSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKD 426
++ VLEE PKW +L +VL EIEEE ++ R L G ++ +V+ +
Sbjct: 416 PKWLPDGMDPVLEELPKWNLLADVLHEIEEEMMR-LEPRLTSLSPG--SNTTLVMTSSLR 472
Query: 427 EC-------SCMQLEDCIRNGSEKVMRE-EWEKYLLSKVQLRSVQTSSKKKKSKEPKGYG 478
C S M L D R + M E + + YL K S +K+ K
Sbjct: 473 TCALVNEFLSSMDL-DAPRGARARAMMERKLKTYLWFKSNF-----SDRKQTGK------ 520
Query: 479 ILDGVAPVKIAQNAEASS-VSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGR 537
QN + ++ E DA L+ A + +++ K + N R R
Sbjct: 521 ----------GQNTTSDGKKNRPETDAGLSEALRRKDKEKRERAAN-----------RRR 559
Query: 538 GKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISG--------SGNEGPADEIHSGV-- 587
+G PA D+++ I++ +I+ GN P + +
Sbjct: 560 VRG---GAPAAPTTREGSDAQAGEDVMIQEADDIAALYAPFRVLRGNAAPQGPVEEDITL 616
Query: 588 VGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIV 647
+G+ E+ F + + T V Y+ ++D +L ++P IV
Sbjct: 617 LGF-----ESDF---DAHYGLLAPQQTVL---------VRAYSDDADDRMLQEIQPRFIV 659
Query: 648 VYHPDMSFVRQIE------------------VYKAENPSIKLKVYFLFYEDSTEVQKFKA 689
++ P++ FVR+IE VY+ NP + ++VYF+ Y S E K+
Sbjct: 660 MFEPNLEFVRRIEVRPNASDSILIYERVTEQVYRNSNPGLGVRVYFMMYRYSCEEGKYLT 719
Query: 690 GIRRENGAFESLIRQKSFMMIPI 712
G+RRE +FE LI+++ M++PI
Sbjct: 720 GLRREKESFERLIKERGSMLMPI 742
>gi|326474377|gb|EGD98386.1| DNA repair protein RAD1 [Trichophyton tonsurans CBS 112818]
Length = 985
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 217/773 (28%), Positives = 359/773 (46%), Gaps = 171/773 (22%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q ++ EL E LVIL+ GL L K+I ++L + + L++L + + +++ I
Sbjct: 16 LPYQQSLLNELRSEDE--LVILAQGLGLLKIITNLLHTYDAAGNNLIILVGASDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRH------------TLYSSGQIFFVTPRI 101
HY +PL L T + R L++SG I + P++
Sbjct: 74 GEALAEHYAISKSPLARGLKVINTDRATVSMRRDLSEFWLWIYFLALFNSGAIGLLDPKL 133
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ G+I+L+ + S E FI RI + N++ ++AFSD P +
Sbjct: 134 I--------------TGMIVLHAEKVVATSLEAFIIRIYRQHNKDGMLKAFSDTPEPFTT 179
Query: 162 GFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEV 220
GFA ++++LF++K LWPRFQV V+E LE V+++ VPM+ M IQ A+LE
Sbjct: 180 GFAPLSNMLRNLFLQKTSLWPRFQVTVAESLEGHRKAEVIELEVPMTDKMKEIQNAVLEC 239
Query: 221 MDACLKEMRKTNK-VDV-EDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTL 278
++ ++E++++N +DV +D TV++ L K+FD +RRQLDP+WH + +T+Q+ SDL L
Sbjct: 240 VEVNIRELKRSNTGLDVGDDWTVDSALHKNFDVAIRRQLDPVWHRVSFRTRQIASDLTVL 299
Query: 279 RKLLDYLVRYDAVTYLKYLDTLRVSESFR--------SVWIFAESSYKIFDYAKKRVYRF 330
R +L L+ +DAV+ KYLDT+ + S S W+F +++ +FD AK RVY
Sbjct: 300 RSILHSLLTFDAVSLNKYLDTVISAHSASAGSTKQNYSPWLFLGAAHVLFDTAKSRVY-- 357
Query: 331 TRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREV 390
KK+ +K ++ D G +E VLEE PKW VL EV
Sbjct: 358 -----------------KKKASEKTSSSSDIFNG---------IEPVLEEQPKWAVLAEV 391
Query: 391 LEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQL----------------- 433
L+EIE++ ++ G N+ +LV C D+ +C Q+
Sbjct: 392 LQEIEQDTYLNPAA------PGSSNN--AILVMCSDQQTCRQVREYLSTMHKKKKSFDKN 443
Query: 434 ----------EDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGV 483
ED + ++ +MR + +YL K L +V K K KG + G
Sbjct: 444 EDDEADILPHEDEHQPSADTMMRRKLREYLYWKRNLSNVNNHLHDVKPKT-KGIAEVPGF 502
Query: 484 APVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNR 543
+ SSV+ Q H + P R + R
Sbjct: 503 TSI--------SSVAPQGH--------------------------SGRAPPNKRRRVRGG 528
Query: 544 NGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKE 603
+ A A + + + + ED PE+ E +++ A +E E
Sbjct: 529 SSAASA-SGAGRPAHGSVQVDTEDVPEVPDISEE----------------VIQQAILE-E 570
Query: 604 VQWKRSLKTDTA------ESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVR 657
VQ +L+ D E D + VH Y + D+ +L+ L+P I++Y PD +F+R
Sbjct: 571 VQ-HITLEDDLQDMDNYYELYDVNDLLVVHHYDADMDEHVLEELRPRYIIMYEPDAAFIR 629
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
++EVY++ + ++VYF++Y +S E Q++ + +RRE AF LI ++ M +
Sbjct: 630 RVEVYRSSHQDRNVRVYFMYYGESVEEQRYLSAVRREKDAFTKLIHERGTMAM 682
>gi|431910465|gb|ELK13537.1| DNA repair endonuclease XPF [Pteropus alecto]
Length = 891
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 259/459 (56%), Gaps = 47/459 (10%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF E +++ + L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVE----XKYLKIICL 188
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
+ RF V V+ LE P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 189 F-RFHVAVNSFLEHHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 247
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 248 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 307
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVYR + ++ K + +KV+
Sbjct: 308 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYRVPDA----------KISKKGKTSEKVE 357
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE +PKW+ L EVL+EIE E ++ + L G
Sbjct: 358 IKEEQEK-----------ELVLESSPKWEALTEVLKEIEAENMESEA------LGGP--- 397
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + I G+E ++ R+ +EK
Sbjct: 398 -GQVLICASDDRTCSQLREYIAVGAEAFLLRLYRKTFEK 435
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 609 SLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIV-VYHPDMSFVRQIEVYKAENP 667
+L +D A P+ +H P+L P+ + V H R + +Y AE
Sbjct: 530 NLSSDAAYGILKDPLTIIH--------PLLGCSDPYALTRVLHEVEP--RYVVLYDAE-- 577
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
L VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 578 ---LTVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 618
>gi|317033464|ref|XP_001395842.2| DNA repair protein RAD1 [Aspergillus niger CBS 513.88]
Length = 948
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 215/734 (29%), Positives = 341/734 (46%), Gaps = 124/734 (16%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q I EL E LVIL+ GL L +L+ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDIFTELRSE--DELVILARGLGLLRLVTNLLHFYDAAGNNLVLVVGADDRENEWI 73
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
HY PL + + A +P R +YS G I VT RILIVD L++ L
Sbjct: 74 GEALAEHYAISKTPLARGLKVINTDRATVPM--REKIYSEGGILSVTSRILIVDFLSKLL 131
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ G+++L+ + S E FI R + N+ +++AFSD P +GFA M+
Sbjct: 132 DPEKVTGMVVLHADKIVATSIEAFIIRAYREHNKRGFLKAFSDAPEPFTTGFAPLANSMR 191
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRF V V+E LE V+++ VPMS M IQ A+LE
Sbjct: 192 NLFLRKTSLWPRFHVTVAEALEGHRKAEVIELEVPMSDKMREIQNAVLE----------- 240
Query: 231 TNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
SFD +RRQLDPIWH + +T+Q+VSDL LR +L L+ YDA
Sbjct: 241 -----------------SFDVAIRRQLDPIWHRVSFRTRQIVSDLSDLRAILHALLTYDA 283
Query: 291 VTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V++LKYLDT+ + + S W+F +++ +F A+ RVY+ S+ V
Sbjct: 284 VSFLKYLDTIVTAHTPPPGSTKHSYSPWLFLDAADVLFQTARSRVYQGRISNDVV----- 338
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
+SSTS L+ VLEE PKW+V+ EVL+EIE +
Sbjct: 339 ---------------------RSSSTSFPTTLQPVLEEQPKWEVVAEVLQEIETDAYLNP 377
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSV 462
+ +E + VL+ C D+ +C QL + + V
Sbjct: 378 VNVDE--------SNSTVLIMCSDQRTCRQLREYMGTMHANV------------------ 411
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGD 522
SSKK+++++ G D + K + + D L+ ++ +N + GD
Sbjct: 412 --SSKKQETRDTLNPG--DAIHEKKGSAEVMMRRRLRDYMDWKLSLSNVSKNFSSNPPGD 467
Query: 523 NPETYY----GSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEG 578
P++ GS GR R R P + S + IE ++S E
Sbjct: 468 GPQSPAVNSPGSLNQGRAPMNKRRRVRGGGTPSVPARAPNSGIQVDIEPPAQVSALLEEI 527
Query: 579 PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPIL 638
E+ ET E + + D E D + +H Y + D+ IL
Sbjct: 528 QPTEVE-----------ETQKEEIIIDDLEDMD-DYYELYDMDDLVIIHPYDGDMDEHIL 575
Query: 639 DILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAF 698
+ ++P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q++ + +RRE +F
Sbjct: 576 EEVRPRYIIMYEPDPAFIRRVEVYRSSHVGRDVRVYFIYYGGSVEEQRYLSAVRREKDSF 635
Query: 699 ESLIRQKSFMMIPI 712
LI++KS M + I
Sbjct: 636 TKLIKEKSNMAVTI 649
>gi|301103506|ref|XP_002900839.1| DNA repair endonuclease XPF, putative [Phytophthora infestans
T30-4]
gi|262101594|gb|EEY59646.1| DNA repair endonuclease XPF, putative [Phytophthora infestans
T30-4]
Length = 946
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 238/428 (55%), Gaps = 39/428 (9%)
Query: 35 ASVLLLHSPSQGTLLLLSSSPNLKS--QIIHYLAPNAPLLPSEITADLPANHRHTLYSSG 92
AS + L+ + +L L+++ + +++ L + LLP + A N R +Y G
Sbjct: 58 ASFIRLYCSPRSLVLCLNANEQAATLRRLVLALGLDRRLLPRVVDARNNLNERQQMYKRG 117
Query: 93 QIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAF 152
+FFVT RIL+VDLL+ + ++GL++ N H +TE S E FI R+ + NRE +I+ F
Sbjct: 118 GVFFVTARILVVDLLSNHVDPGLISGLLVNNAHHVTETSIEAFILRLYRERNREGFIKGF 177
Query: 153 SDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGG 212
D A+ SGF + E+++K L++R + L+PRF V ++ LE+ P V ++ V S M
Sbjct: 178 CDDSVALSSGFNRVEQVLKHLYVRNVFLYPRFHVAINSCLEKHQPEVYEIEVGFSPSMKI 237
Query: 213 IQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQL 271
+Q+A+L ++A +KE+ R T +D DLT++ L KSF +RRQLDP+WH L KTKQL
Sbjct: 238 MQEALLVALEATVKELQRSTKSLDAADLTMDKALAKSFSIFIRRQLDPLWHKLPVKTKQL 297
Query: 272 VSDLKTLRKLLDYLVRYDAVTYLKYL---DTLRVSESFRSVWIFAESSYKIFDYAKKRVY 328
V DL TLR+LL YL RYDA++Y +L T+ + F S W+F +++ ++ AK+R+Y
Sbjct: 298 VGDLSTLRQLLAYLPRYDAISYYSFLVNYQTMNGQQRFPSPWLFTDAADRLLTAAKERLY 357
Query: 329 RFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLR 388
S TGK L++V +N G +S + L+ L++ PKW+ LR
Sbjct: 358 HIVDSK-----------TGKPVNLRQVSSN----GSSSKAAENAELKLTLDQNPKWEALR 402
Query: 389 EVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
E+L+E VLV KDE +C Q+ + + G++++MR
Sbjct: 403 EILDE------------------NSAAGGASVLVMVKDERTCAQIREFLSLGAQEMMRRR 444
Query: 449 WEKYLLSK 456
+ YLL K
Sbjct: 445 FGHYLLQK 452
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
L+ L P IV+Y PDM+F+R++EV+ A + + L++YFL Y++STE Q + + I+RE
Sbjct: 603 FLEDLMPSCIVLYDPDMAFIREVEVFHASHVA-PLEIYFLMYDESTEQQSYLSEIQREKR 661
Query: 697 AFESLIRQKSFMMIPID 713
AF+ LI QK+ +M+P +
Sbjct: 662 AFDKLIHQKAHLMMPAN 678
>gi|303278230|ref|XP_003058408.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459568|gb|EEH56863.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1140
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 224/368 (60%), Gaps = 43/368 (11%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQ---------------- 45
+LEF + I+ EL+ GL +L+ GL LP+++A ++ S+
Sbjct: 21 LLEFQRAIVDELVA--RDGLTVLAEGLGLPEVLAGLIRARHASRVFARSFADGREAFQSL 78
Query: 46 ----------------------GTLLLLSSSPNLKSQIIHYLAPNAP--LLPSEITADLP 81
G +L++ ++ K +LA AP P+++ AD
Sbjct: 79 LGDGERDDVDDAATRSVTNCASGPVLIVGATDAQKRATRLHLAAIAPETPFPADVNADFT 138
Query: 82 ANHRHTLYSSGQIFFVTPRILIVDLLTQ-RLPTSNLAGLIILNTHALTENSTETFICRII 140
+R +Y+SG F+T RI VDLLT+ RLP +AG++++N H +T+ S E F+ R+
Sbjct: 139 GANRKKMYASGPTVFITTRIAAVDLLTEDRLPPRAVAGVVVVNAHRVTDLSGEAFVIRLF 198
Query: 141 KSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVV 200
+ NR ++RA SD+P ++ GF ER MK+L +R L+L+PRF + V +L+ P VV
Sbjct: 199 RGGNRVGFVRALSDRPGELMRGFNALERAMKALMVRALNLYPRFHLAVKHDLDDHAPEVV 258
Query: 201 DVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDPI 260
++ P++K + IQ AI+E+M+ C+ E++K+ VDV +L+VE G+FKSFD L RQLDP+
Sbjct: 259 ELHQPLTKPIRSIQDAIVEIMEQCMCELKKSKHVDVSELSVEAGMFKSFDRTLSRQLDPV 318
Query: 261 WHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIF 320
WH++ +K KQ+V DL+TLR L YL+RYDAVT+L+YL+TLR++E +S+W+F + ++ +F
Sbjct: 319 WHVVPRKLKQIVYDLRTLRNLAMYLLRYDAVTFLRYLETLRLAEGSQSMWLFTDGAHVVF 378
Query: 321 DYAKKRVY 328
+ AK+RVY
Sbjct: 379 EQAKRRVY 386
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
++ +AL I+ +KP +++Y PD +FVR+IE + A P L++YFL +E S E Q
Sbjct: 764 IYVHALTGRGGIIARVKPSFVILYDPDAAFVREIETFTARRPGAPLRIYFLVHEGSLEEQ 823
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ + +R E AF+SL+R K M +P +Q
Sbjct: 824 RYVSQLRYETNAFDSLVRAKQHMSMPAEQ 852
>gi|425771605|gb|EKV10043.1| DNA repair protein RAD1, putative [Penicillium digitatum Pd1]
gi|425777109|gb|EKV15299.1| DNA repair protein RAD1, putative [Penicillium digitatum PHI26]
Length = 960
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 209/737 (28%), Positives = 354/737 (48%), Gaps = 116/737 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L LI ++L + + L+L+ + +++ I
Sbjct: 16 LQYQQELFTELRAE--DELVILARGLGLLHLITNLLHFYDAAGNNLVLVVGADERENEWI 73
Query: 63 ------HYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNL 116
HY +PL + T ++ + +V+ + VD + L +
Sbjct: 74 GEALAEHYATSKSPLARGLKVIN-------TEKATVPMRWVS-HLCHVD--CELLDPEKV 123
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIR 176
G++IL+ + S E FI R+ + N+ +++AFSD P +GFA ++++LF+R
Sbjct: 124 TGMVILHADKVFATSLEAFIVRVYRQSNKLGFLKAFSDSPEPFTTGFAPLANMLRNLFLR 183
Query: 177 KLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-V 234
K LWPRF V+V+E LE V+++ VPMS M IQ A+LE ++ + E+RK+N +
Sbjct: 184 KASLWPRFHVSVAESLEGNRKAEVIELEVPMSDKMREIQNAVLECVEISITELRKSNTGL 243
Query: 235 DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294
D+E+ T+++ L ++FD I+RRQLDPIWH + +T+Q+VSDL LR +L L+ YDAV+++
Sbjct: 244 DMEEWTLDSALHRNFDMIIRRQLDPIWHRVSFRTRQIVSDLTVLRAVLHALLSYDAVSFV 303
Query: 295 KYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT 346
KYLDT+ + + S W+F ++++ +F AK RVY +G +LN + +
Sbjct: 304 KYLDTIVSAHAPPPGSNRHNHSPWLFLDAAHILFQTAKSRVY-----EG-KLNNELTRL- 356
Query: 347 GKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSRE 406
+SST+ L LEE PKW VL E+L EIE
Sbjct: 357 ------------------SSSTTFASDLNPALEELPKWSVLSEILAEIE----------H 388
Query: 407 EVLLDGEENDH--GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQT 464
+ L DH +L+ C D+ C QL + I K+
Sbjct: 389 DAYLHPARMDHSNSTILIMCSDQRICRQLREYIGTMHSKIAE------------------ 430
Query: 465 SSKKKKSKEP---KGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD- 520
S+ K+ +P K L ++ N + S L+ +K +Q + DD
Sbjct: 431 GSESKEDNDPSEDKPSAELMMRRRLREYLNWKRS----------LSNVNKNLSQSREDDR 480
Query: 521 -GDNPETYYGSKGPGRGR---GKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGN 576
G PE+ ++ +GR K R G V +A + S+ + +E ++ +
Sbjct: 481 SGKPPES-SAARSAHQGRPPPNKRRRVRGGGAVTSAAGRVPNSSVQTEVELPSQVVNLLS 539
Query: 577 EGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDT-AESKDSKPVPPVHFYALESDQ 635
+ E+ ++EV + D E D + +H Y + D+
Sbjct: 540 DIQPTEVED-------------MQKEEVMVDELVDMDVFYELYDMNDLIMIHPYDGDMDE 586
Query: 636 PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRREN 695
+L+ +P I++Y PD +F+R++EVY++ + +KVYF++Y S E Q++ + +RRE
Sbjct: 587 HLLEEARPRYIIMYEPDPAFIRRVEVYRSSHSGRNVKVYFMYYGGSVEEQRYLSAVRREK 646
Query: 696 GAFESLIRQKSFMMIPI 712
AF LI++K M + +
Sbjct: 647 DAFTKLIKEKGTMAVTL 663
>gi|320589465|gb|EFX01926.1| DNA repair protein [Grosmannia clavigera kw1407]
Length = 1038
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 245/456 (53%), Gaps = 54/456 (11%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
LE+ Q + EL LV+L+ GL L +L+ ++L + + L+L+ ++
Sbjct: 66 LEYQQSLFQEL--RATDELVVLARGLGLMRLVTNLLHSYDAAGNNLILVVNATERENGWI 123
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L ++P A L T R +Y++G +F +T RIL+VDLLT L
Sbjct: 124 GEALAEHAAISMSPRARGLTVVNTDFTTVGTREKMYAAGGVFSITSRILVVDLLTSLLDP 183
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++++G+++L+ + S E FI RI + N+ +++AFSD P A SG+A +M++L
Sbjct: 184 ASVSGMVVLHADRVAATSLEAFILRIYRQKNKHGFLKAFSDSPEAFSSGYAPLATMMRNL 243
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V+ LE R+ VV+ VPM++ M IQ AILE ++ + E++K+N
Sbjct: 244 FLRKASLWPRFHVTVAAGLEGRKRAEVVEFEVPMTENMKDIQNAILECVEVSIHELKKSN 303
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D++D +++ L K+FD ++RRQLDP WH + KTKQ+V DL LR +L +V DAV
Sbjct: 304 PGLDMDDWNLDSALLKNFDTMVRRQLDPNWHRVSWKTKQIVGDLTVLRGMLHSIVACDAV 363
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+L+ LDT+ + S +S W+F +++ IFD AK+RVY
Sbjct: 364 AFLQRLDTIHAAHSPAPGSTRQTQSPWLFLDAAQTIFDTAKRRVY--------------- 408
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK D GT++ +T L VLEE PKW VL +VL EI+ +
Sbjct: 409 --TGKH------DFRSASSTGTAAVTT--TLRPVLEEQPKWSVLADVLAEIDRSLYLEPM 458
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
R ++ +G +L+ C D +C QL D ++
Sbjct: 459 PR--------DDSNGTILIMCGDTDTCRQLRDFLQT 486
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ Y + D+ +L+ +KP IV+Y PD +F+R+IEVY++ + ++ YF++Y S E Q
Sbjct: 675 IQAYDGDQDEHVLEEVKPRYIVMYEPDAAFIRRIEVYRSSHNDRNVRTYFMYYGGSVEEQ 734
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
K+ + +RRE AF LI++++ M +
Sbjct: 735 KYLSAVRREKDAFTRLIQERASMSV 759
>gi|212526684|ref|XP_002143499.1| DNA repair protein RAD1, putative [Talaromyces marneffei ATCC
18224]
gi|210072897|gb|EEA26984.1| DNA repair protein RAD1, putative [Talaromyces marneffei ATCC
18224]
Length = 980
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 249/456 (54%), Gaps = 59/456 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L +++ ++L + L+++ + + +++ I
Sbjct: 15 LKYQQDLFNELRNEDE--LVILARGLGLLRIVTNLLHAFDAAGNNLIIVVGADDRENEWI 72
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
HY +PL + + A +P R YS G I VT RIL+VDLL++ L
Sbjct: 73 GEALAEHYAISKSPLARGLKVINTDRATVPM--REKTYSRGGILSVTSRILVVDLLSKLL 130
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ G+I+L+ + + E FI R+ + NR +++AFSD P +GFA +++
Sbjct: 131 DPEKITGIILLHAERVVATALEAFIVRVYRQFNRNGFLKAFSDSPEPFTTGFAPLSNMLR 190
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRF V V+E LE R V+++ VPM+ M IQ A++E ++ + E++K
Sbjct: 191 NLFLRKPSLWPRFHVTVAESLEGRRKAEVIELEVPMTDKMRDIQNAVMECVEISVSELKK 250
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
N +D+ED T+++ L K+FD +RRQLDPIWH + +T+Q+ +DL LR +L L+ YD
Sbjct: 251 ANSGLDMEDWTLDSALHKNFDVAIRRQLDPIWHRVSFRTRQIANDLTVLRAILHSLLTYD 310
Query: 290 AVTYLKYLDTLRVSESFR--------SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
+V+ LKYLDT+ + S S W+F ++++ +F+ AK RVYR
Sbjct: 311 SVSLLKYLDTVVAAHSAPPGSTRHSFSPWLFLDAAHVLFETAKSRVYR------------ 358
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
+TG + T+ ++ L+ VLEE PKW VL E+L+EIE++
Sbjct: 359 -GKITGT-------------NTSTTPSAFSAALQPVLEEQPKWHVLAEILQEIEQDAYLN 404
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI 437
+ R G+ N VL+ C D+ +C QL D +
Sbjct: 405 PTQR------GDSN--STVLIMCGDQRTCRQLRDFL 432
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 56/87 (64%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 590 IHPYDGDMDERILEEARPRYIIMYEPDAAFIRRVEVYRSSHSDRNVRVYFMYYGGSVEEQ 649
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI +K M + +
Sbjct: 650 RYLSAVRREKDAFTKLITEKGGMAVTL 676
>gi|327355286|gb|EGE84143.1| DNA repair protein RAD1 [Ajellomyces dermatitidis ATCC 18188]
Length = 978
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 253/463 (54%), Gaps = 59/463 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + +EL E LVIL+ GL L +++ ++L + + L+++ + +L+++ I
Sbjct: 16 LQYQQDLFSELRAEDE--LVILARGLGLLRIVTNLLHSYDAAGNNLIIVVGAGSLENEWI 73
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
Y PL + + A +P R +Y+ G I VT RIL+VDLL++ L
Sbjct: 74 GEALAEQYAVSRTPLARGLKVINTDRATVPL--RQKMYAQGGILSVTSRILVVDLLSKIL 131
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ GLI+L+ +T S E FI RI + N+ ++AFSD P GF +M+
Sbjct: 132 DPETITGLIVLHAEKITATSLEAFIIRIYRQFNKVGCLKAFSDSPEPFTIGFNPLANMMR 191
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++A ++E++K
Sbjct: 192 NLFLRKPSLWPRFQVTVAESLEGRKKAEVIELEIPMTDKMRDIQNAVLECVEANIRELKK 251
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
+N +D+ED TV++ L + FD +RRQL+ +WH + +TKQ+ +DL LR +L L+ YD
Sbjct: 252 SNSGLDIEDWTVDSALHQDFDVSIRRQLEHMWHRVSFRTKQIANDLTVLRSILHSLLTYD 311
Query: 290 AVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
+V+++KYLDT+ + S S W+F ++++ +F AK RVYR
Sbjct: 312 SVSFIKYLDTIIAAHSPPPGSTRQNYSPWLFLDAAHVLFQTAKSRVYR------------ 359
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
K+DN + + S LE VLEE PKW VL +VL+EIE
Sbjct: 360 -----------GKLDNRQ---FIPDTASLPTALEPVLEEQPKWSVLADVLDEIER----- 400
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
S+ +L G+ N G +LV C D +C Q+ + + K+
Sbjct: 401 -STYLNPVLPGDSN--GTILVMCSDRKTCCQIREYLETMRIKI 440
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 60/89 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V+ Y + D +L+ +KP I++Y PD +F+R++EVY++ + + +++VYFL+Y S E Q
Sbjct: 593 VYPYDGDMDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVYFLYYGGSVEEQ 652
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ + +R+E AF LI++K M + I+
Sbjct: 653 RYLSAVRKEKDAFTKLIKEKGSMSLTINH 681
>gi|346320521|gb|EGX90121.1| DNA repair endonuclease XPF [Cordyceps militaris CM01]
Length = 940
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 251/455 (55%), Gaps = 59/455 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL E LV+L+ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 16 LEYQQALFQELRSEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIVIVGAEDRENGWI 73
Query: 63 -HYLAPNAPLLPSE-------ITADLPA-NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + D + R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISASPKARGLTVVNTDFQSVGAREKMYAGGGIFSITSRILVVDLLTGLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GLI+L+ + S E FI R+ + N+ +++AF+D P GF+ M++L
Sbjct: 134 ETITGLIVLHADRIVATSLEAFILRVYRQKNKVGFLKAFADNPDPFTIGFSPLASRMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRF V V++ LE ++ V+++ VPM++YM IQ AI+E ++ + E++K N
Sbjct: 194 FLKKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTEYMTDIQNAIMECVEISIHELKKGN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L K+FD I+RRQLDP WH + KTKQ+VSDL LR LL+Y+V YD V
Sbjct: 254 PGLEMDDWNLDSALLKNFDVIVRRQLDPNWHRVSWKTKQIVSDLTVLRGLLNYVVTYDPV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ +F+ A+KRVY
Sbjct: 314 SFLQHLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTLFETARKRVY--------------- 358
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+K++ E+ D L VLEE PKW +L EVLEEI+ + +
Sbjct: 359 -----AASIKQISQEENIDS----------LRPVLEELPKWSMLAEVLEEIDRDLYFEPH 403
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
+R++ +G +L+ C + +C QL D ++
Sbjct: 404 ARDD--------SNGTILIMCSNVDTCRQLRDYLQ 430
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 594 MLETAFVEKEVQWKRSLKTDTAESK-------DSKPVPPVHFYALESDQPILDILKPFVI 646
M E E+E + K + D ++ D + + +H Y + D+ +L+ +KP I
Sbjct: 545 MAEVQITEEEAKQKDDVIADPLDNMEDYYQLYDMQDLVVIHAYDGDQDEHVLEEVKPRYI 604
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
++Y PD SF+R++EVY++ + ++VYFL+Y S E Q++ +RRE AF LI++++
Sbjct: 605 IMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSIEEQRYLTSVRREKDAFTKLIKERA 664
Query: 707 FM 708
M
Sbjct: 665 GM 666
>gi|302830916|ref|XP_002947024.1| hypothetical protein VOLCADRAFT_103253 [Volvox carteri f.
nagariensis]
gi|300268068|gb|EFJ52250.1| hypothetical protein VOLCADRAFT_103253 [Volvox carteri f.
nagariensis]
Length = 1450
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 229/387 (59%), Gaps = 34/387 (8%)
Query: 46 GTLLLLSSSPNLKSQIIHYLAPNAPLL--PSEITADLPANHRHTLYSS---GQIFFVTPR 100
G +L+L + P ++ I LA + P L P +IT ++PA R LY + G+ F+TPR
Sbjct: 112 GCVLVLGAGPRQRALITAELARHDPSLEAPVDITNEIPAAERVQLYRALPGGRPLFITPR 171
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA------------- 147
IL+VDLL +RL + GL+ILN H ++ S E F ++K+ A
Sbjct: 172 ILVVDLLARRLRPWEVGGLLILNAHRASDTSGEGFAVALLKAEGDAAARTGPARGGSGGG 231
Query: 148 -YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPM 206
++ A SD P A GF + E +MK+L +++LHLWPRFQ +V + L+ PVV + +
Sbjct: 232 CWVYALSDAPGAFNRGFNRVEHVMKALRLKRLHLWPRFQEHVRQCLDNHKPVVFEWDQEL 291
Query: 207 SKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILG 265
S M IQ A++EV++ ++E+R+TN K+D+ +L +ENG+ ++FDEI+RRQLDPIWH +
Sbjct: 292 SGPMVLIQAALVEVLEGLIRELRRTNNKLDMTELVLENGVLRAFDEIVRRQLDPIWHTVS 351
Query: 266 KKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKK 325
KT+++ +DL+TLR+L L+ D VT+L +L+ LR SE R +W+F ++++ I++ A++
Sbjct: 352 YKTRRICTDLRTLRELSALLLSADCVTFLAHLEGLRQSEGVRCMWLFHDATHAIYEQARR 411
Query: 326 RVYRFTRSDGVELNGQSKSVT--GKKRKLKKVDNNEDEDGGTSSTSTKVV---------- 373
RVY + + + QS S + G + + + GG+S+++
Sbjct: 412 RVYIYRQQQQQQQGHQSASGSRPGTGTRAARATSGGVAAGGSSASAGAGAGAGGGGSGCH 471
Query: 374 --LEEVLEEAPKWKVLREVLEEIEEER 398
+E +LEE PKW +L EVL E++ +R
Sbjct: 472 SEVEAILEEPPKWGLLGEVLGEVQRQR 498
>gi|396464083|ref|XP_003836652.1| similar to DNA repair protein RAD1 [Leptosphaeria maculans JN3]
gi|312213205|emb|CBX93287.1| similar to DNA repair protein RAD1 [Leptosphaeria maculans JN3]
Length = 1002
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 246/455 (54%), Gaps = 55/455 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LEF Q I EL +E LVIL+ GL L +++ ++L + + L+LL + + ++ I
Sbjct: 65 LEFQQDIFKELREEDE--LVILARGLGLLRIVTNLLHSYDAAGNNLILLVGADDRENVWI 122
Query: 63 ------HYLAPNAPLLP--SEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
H NAP S + DL R +Y+ G IF +T RILIVD L+ L
Sbjct: 123 GEALAEHAAVSNAPKCRGLSLVNTDLMTVGTREKMYAQGGIFSITSRILIVDFLSGLLNP 182
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GFA +MK+L
Sbjct: 183 ETVTGVVVLHAERVVATSLEAFILRIYRQKNKAGFLKAFSDTPEPFTTGFAPLTHMMKNL 242
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+ K L+PRF V+V+ LE R+ V+++ VPM++ M IQ A+L ++A + E++K N
Sbjct: 243 FLSKPALYPRFHVSVANSLEGRKKAEVIELEVPMTEAMQDIQNAVLACVEASISELKKAN 302
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++VED V++ L K+FD+I+RRQLDP+WH KT+Q+V DL LR +L L+ YDA+
Sbjct: 303 PGLEVEDWNVDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLRTILHALLTYDAI 362
Query: 292 TYLKYLDTLRV--------SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ KYLDT+ + +S W+F +++ IF AK+RV++ R EL S
Sbjct: 363 NFNKYLDTVLAASQPPPGSTRQNQSPWLFLDAADTIFTTAKRRVFK-GRISNAELANSSN 421
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+V LE VLEE PKW L ++L+EIE++ +
Sbjct: 422 AVPES-------------------------LEPVLEEFPKWAQLADILQEIEQDGYFNPT 456
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
+++ +G +L+ C D+ +C QL + ++
Sbjct: 457 P--------QDSSNGCILIMCGDQGTCSQLREYLQ 483
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH YA + D+ ILD KP +++Y PD +F+R+IEVY++ + +KV+F++Y S E Q
Sbjct: 638 VHPYAGDLDEHILDETKPRYVIMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQ 697
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI+++ M + +
Sbjct: 698 RYLSAVRREKDAFTRLIKERGNMALTL 724
>gi|311780283|gb|ADQ08682.1| xeroderma pigmentosum F DNA repair endonuclease [Hydra vulgaris]
Length = 816
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 250/436 (57%), Gaps = 44/436 (10%)
Query: 18 NGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL-APNAPLLPSEI 76
+ GL+I++SGL + +++ V+ + +L+L+S + +I L + LP+ I
Sbjct: 3 DDGLLIIASGLDIDRILLKVIETFCKPENLVLVLNSFSEEQEFLIDELKSKGVSHLPNII 62
Query: 77 TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFI 136
TA++ + R+ LY G +FFVT RIL+VD+LT+++P + G+++ H + E S E+FI
Sbjct: 63 TAEVTSQERNNLYLKGGVFFVTSRILVVDMLTKKIPIDYITGILVQRAHKVAETSHESFI 122
Query: 137 CRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREP 196
R+ + N + +I+AFSD PT+ ++ + K ER+MK LF++KL+L PRF +++ E
Sbjct: 123 MRMYRESNSDGFIKAFSDSPTSFLTEYCKVERVMKQLFLKKLYLRPRFHSDIATVFEESK 182
Query: 197 PVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRR 255
V+++ + ++ YM IQ +++E+++ LKE++K+ + +D EDLT+EN L SFD+ L+
Sbjct: 183 IDVIEIGIVLTAYMKKIQLSLMELIEVSLKELKKSVEFLDTEDLTLENSLTNSFDKTLKI 242
Query: 256 QLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRV-SESFRSVWIFAE 314
QLDP W+ L K KQLV+DLK LR LL YL +YD +T+ K+L +L +++ S+W+F +
Sbjct: 243 QLDPHWNKLNSKAKQLVADLKILRILLGYLTQYDCITFYKFLQSLSSNAQNKNSIWMFLD 302
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
++ +F AK RVY G + +D+ E SS
Sbjct: 303 AANLVFQSAKARVY------------------GCESSSSSLDSFE-----MSS------- 332
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
+E +PKW+ L E+L EI+ +S +E + ++ VL+ DE +C QL
Sbjct: 333 ---VEVSPKWEALIEILNEID----NLNTSTDE----NKSDEKCRVLICAFDERTCYQLR 381
Query: 435 DCIRNGSEKVMREEWE 450
+ G + M + +E
Sbjct: 382 QALCCGLRETMSQLYE 397
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
L+P +V+Y + FVRQ+E++KA P L VYFL Y S E Q++ +R+E +FE
Sbjct: 468 LQPNYVVLYDAHIRFVRQLEIFKASMPEQPLHVYFLIYNGSVEEQRYLTNLRKEKESFEL 527
Query: 701 LIRQKSFMMIP 711
LI+QK+ M++P
Sbjct: 528 LIKQKAEMVVP 538
>gi|242781532|ref|XP_002479819.1| DNA repair protein RAD1, putative [Talaromyces stipitatus ATCC
10500]
gi|218719966|gb|EED19385.1| DNA repair protein RAD1, putative [Talaromyces stipitatus ATCC
10500]
Length = 972
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 244/456 (53%), Gaps = 67/456 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L +++ ++L + L+++ + + +++ I
Sbjct: 15 LKYQQDLFNELRNE--DELVILARGLGLLRIVTNLLHAFDAAGNNLIIVVGADDRENEWI 72
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
HY PL + + A +P R +Y+ G I VT RIL+VDLL++ L
Sbjct: 73 GEALAEHYAISKTPLARGLKVINTDRATVPM--REKIYNQGGILSVTSRILVVDLLSKLL 130
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
+ G+I+L+ + + E FI R+ + N+ +++AFSD P +GFA ++
Sbjct: 131 DPEKITGIILLHAERVVATALEAFIVRVYRQFNKNGFLKAFSDSPEPFTTGFAPLSNGLR 190
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRF V V+E LE R V+++ VPM+ M IQ A++E ++ + E++K
Sbjct: 191 NLFLRKPSLWPRFHVTVAESLEGRYKAEVIELEVPMTDKMRDIQSAVMECVETSVSELKK 250
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
N +D+ED T+++ L +FD +RRQLDPIWH + +T+Q+V+DL LR +L L+ YD
Sbjct: 251 ANSGLDMEDWTLDSALHSNFDVAIRRQLDPIWHRVSFRTRQIVNDLTVLRAILHSLLTYD 310
Query: 290 AVTYLKYLDTLRVSESFR--------SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
AV+ LKYLDT+ + S S W+F ++++ +F+ AK RVYR
Sbjct: 311 AVSLLKYLDTVVAAHSAPPGSTRHSFSPWLFLDAAHVLFETAKSRVYR------------ 358
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
G + + L+ VLEE PKW+VL E+L+EIE++
Sbjct: 359 ----------------------GKITGAFSAALQPVLEEQPKWQVLAEILQEIEQDAYLN 396
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI 437
+ R G+ N VL+ C D+ +C QL D +
Sbjct: 397 PTQR------GDSN--STVLIMCGDQRTCRQLRDFL 424
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 56/87 (64%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +P I++Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 582 IHPYDGDMDERILEEARPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQ 641
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI +K + + +
Sbjct: 642 RYLSTVRREKDAFTKLITEKGGLAVTL 668
>gi|451850935|gb|EMD64236.1| hypothetical protein COCSADRAFT_160465 [Cochliobolus sativus
ND90Pr]
Length = 949
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 258/482 (53%), Gaps = 64/482 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LEF Q I EL E LV+L+ GL + +++ ++L + + L+LL + + ++ I
Sbjct: 15 LEFQQDIFNELRGEDE--LVLLARGLGILRIVTNLLHSYDAAGNNLILLVGADDRENVWI 72
Query: 63 ------HYLAPNAPLLP--SEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
H NAP S + DL R +Y+ G IF +T RILIVD L+ L
Sbjct: 73 GEALAEHAAVSNAPKCRGLSLVNTDLMSVGTREKMYAQGGIFSITSRILIVDFLSGLLNP 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GFA +MK+L
Sbjct: 133 ETVTGVVVLHAERVVATSLEAFILRIYRQKNKVGFLKAFSDTPEPFTTGFAPLTNMMKNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+ K L+PRF V V+ LE R+ V+++ VPM++ M IQ A+L ++A + E++K N
Sbjct: 193 FLTKPALYPRFHVAVANSLEGRKKAEVIELEVPMTEAMQDIQNAVLACVEASISELKKAN 252
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++VED TV++ L K+FD+I+RRQLDP+WH KT+Q+V DL LR +L L+ YDAV
Sbjct: 253 PGLEVEDWTVDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLRSILHALLTYDAV 312
Query: 292 TYLKYLDTLRV--------SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ KYLDT+ ++ +S W+F +++ IF AK+RVY
Sbjct: 313 NFNKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIFTTAKRRVY--------------- 357
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TG KV N E +S + LE VLEE PKW L E+L+EIE++ +
Sbjct: 358 --TG------KVSNAE---LANASNAVPESLEPVLEEFPKWTQLAEILQEIEQDAYLNPT 406
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN------GSEKVMREEWE---KYLL 454
+++ +G +L+ C D+ + QL + ++ GS EE+E K+++
Sbjct: 407 P--------QDSSNGSILIMCGDQGTAAQLREYLQTMYVKPEGSADEDEEEYEPSAKFMM 458
Query: 455 SK 456
+
Sbjct: 459 RR 460
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y+ + D+ +LD KP +++Y PD +F+R+IEVY++ + +KV+F++Y S E Q
Sbjct: 586 IHPYSGDLDEHVLDETKPRYVIMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQ 645
Query: 686 KFKAGIRRENGAFESLIRQKSFM 708
++ + +RRE AF LI++++ M
Sbjct: 646 RYLSAVRREKDAFTRLIKERANM 668
>gi|392350984|ref|XP_222534.5| PREDICTED: DNA repair endonuclease XPF-like [Rattus norvegicus]
Length = 888
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 240/458 (52%), Gaps = 67/458 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
I+ L +E L +HT+ + + + +++
Sbjct: 73 INQLK-------TEGVKHLKIVTKHTVLNESKTWL---------------------SILV 104
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+LW
Sbjct: 105 YRAHRIIESCQEAFILRLFRQKNKLGFIKAFTDNAVAFDTGFCHVERVMRNLFMKKLYLW 164
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
PRF V V+ LE+ P VV++ V M+ M IQ AIL+V++ACLKE++ N ++VEDL+
Sbjct: 165 PRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDVLNACLKELKYHNPSLEVEDLS 224
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
+EN L K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++L
Sbjct: 225 LENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESL 284
Query: 301 RVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W+F ++S +F A+ RVYR KL K
Sbjct: 285 RATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDV-----------------KLSKKTK 327
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
++ G TK L VLE PKW+ L EVL+EIE E ++E L G
Sbjct: 328 TSEKMAGPEEQETKKEL--VLESNPKWEALTEVLKEIETE------NKESEALGGP---- 375
Query: 418 GIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 376 GQVLICASDDRTCCQLRDYLTAGAEAFLLRLYRKTFEK 413
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 29/279 (10%)
Query: 448 EWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLA 507
+WE L++V L+ ++T +K+ ++ L G V I + + + +++ A
Sbjct: 351 KWEA--LTEV-LKEIETENKESEA--------LGGPGQVLICASDDRTCCQLRDYLTAGA 399
Query: 508 AASKIRNQGKS--DDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAI 565
A +R K+ DG E + + +G G R + NK+ S + A+
Sbjct: 400 EAFLLRLYRKTFEKDGKAEEVWVNFR---KGDGPKRTMKSDKRPKDAQNKERASTKRGAL 456
Query: 566 EDK-------PEISGSGNEGPAD-EIHSGVVGYSGGMLETAFVE-KEVQWKRSLKTDTAE 616
+ K ++ G+ E P + + + +G E E + + ++ +D A
Sbjct: 457 KRKKKRELTLTQVLGTAEEPPEEGAVEEDLHKQTGSSPEVCGGEIQHESFDLNVSSDAAY 516
Query: 617 SKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK 672
+P+ +H SD +L ++P +V+Y +++FVRQ+E+Y+A P L+
Sbjct: 517 GILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLR 576
Query: 673 VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
VYF Y STE Q++ + +E AFE LIR+K+ M++P
Sbjct: 577 VYFFVYGGSTEEQRYLTALCKEKEAFEKLIREKASMVVP 615
>gi|296425874|ref|XP_002842463.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638731|emb|CAZ86654.1| unnamed protein product [Tuber melanosporum]
Length = 902
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 243/464 (52%), Gaps = 65/464 (14%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN---- 56
+ L + Q + E+ ++ LVIL+ GL L ++ S+L + L+LL + +
Sbjct: 13 LSLAYQQDLFEEVCEQDQ--LVILARGLGLLHIVTSLLHKYDAVGNNLVLLIGADDRENG 70
Query: 57 -----LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
L + P A L T + R +Y G IF VT RIL+ D+LT +
Sbjct: 71 WLGEALAEHAVRSGTPEARGLKIINTEVASVSARAEMYKQGGIFSVTSRILVTDMLTDLM 130
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
++G+++L++ + STE FI RI + N+E +++AFSD P +GFA +M+
Sbjct: 131 DCPKISGVVVLHSERVIATSTEAFILRIYRQKNQEGFLKAFSDNPEPFTTGFAPLATMMR 190
Query: 172 SLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKT 231
+LF+R LWPRF V V+ LE + VV++ V M+ M IQ A+LE ++ + E+RK+
Sbjct: 191 NLFLRSPSLWPRFHVTVARSLETKKAEVVELEVAMTDSMREIQTAVLECIETSISELRKS 250
Query: 232 N-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
N ++++D TV++ L KSFD ++RRQLDP+WH + KTKQ+V+DL LR++L L+ YD
Sbjct: 251 NSSLELDDWTVDSALHKSFDVVVRRQLDPVWHRISWKTKQIVNDLTVLRRILHCLLTYDC 310
Query: 291 VTYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
VT+ +YL+T+ + S +S W+F ++++ IF AK+RVY
Sbjct: 311 VTFYQYLETILATHAPPPGSTRSSQSPWLFLDAAHTIFTLAKRRVY-------------- 356
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
TGK KK +S LE VLEE PKW +L EVL+EIE++
Sbjct: 357 ---TGKADLSKK-----------ASGKVPHGLEPVLEELPKWDMLAEVLDEIEKDGYFNP 402
Query: 403 ----SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSE 442
SSR L+ C DE +C Q+ + ++ E
Sbjct: 403 AFSQSSRS-------------TLIMCSDESTCRQIREFLQTMHE 433
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 56/87 (64%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y + D+ +L L P +++Y PD +F+R++EVY++ + +++VYFL+Y S E Q
Sbjct: 558 VHPYDGDMDERLLGELHPRYVIMYEPDPAFIRRVEVYRSSHKDREVRVYFLYYGKSVEEQ 617
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE +F L+ +K M + +
Sbjct: 618 RYLSAVRREKDSFTKLVHEKGSMSVTL 644
>gi|171684915|ref|XP_001907399.1| hypothetical protein [Podospora anserina S mat+]
gi|170942418|emb|CAP68070.1| unnamed protein product [Podospora anserina S mat+]
Length = 943
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 246/455 (54%), Gaps = 60/455 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL +E LV+L+ GL L +LI ++L + + L+++ ++ + ++ I
Sbjct: 16 LVYQQKLFEELRKEDE--LVVLARGLGLMRLITNLLHSYDAAGNNLIVIVNAEDRENAWI 73
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P A L T R +Y+ G IF VT RIL+VD+LT L
Sbjct: 74 GEALAEHAAISMSPKARGLTVVNTDYTSVGAREKMYAGGGIFSVTSRILVVDMLTGLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ S E FI RI + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ETITGMLVLHADKAVATSLEAFIIRIYRQKNKVGFLKAFSDNPDPFTAGFSPLATMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V+V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 194 FLRKASLWPRFHVHVAQALEGKKKAEVIELEVPMTNAMREIQVAIMECVEVSIHELKKGN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+++ED +++ L K+FD ++RRQLDP WH + KTKQ+V DL LR +L ++ DAV
Sbjct: 254 TGLEMEDWNLDSALLKNFDVLIRRQLDPNWHRVSWKTKQIVGDLTVLRGMLHSVLALDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L+ LDT+ + S +S W+F +++ IFD AKKRVY T+
Sbjct: 314 SFLQQLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTIFDTAKKRVYASTQK---------- 363
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
K D++ D L+ VLEE PKW VL +VLEEI+ + +
Sbjct: 364 ---------AKADSSIDS------------LQPVLEEQPKWSVLADVLEEIDRDLFFEQQ 402
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
+R ++ +G +L+ C D +C QL D ++
Sbjct: 403 AR--------DDSNGTILIMCSDTNTCRQLRDYLQ 429
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ +L+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 582 IHAYDGDQDEHVLEEVKPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 641
Query: 686 KFKAGIRRENGAFESLIRQKSFM 708
++ + +RRE F LI++++ M
Sbjct: 642 RYLSTVRREKDNFTKLIKERASM 664
>gi|167516496|ref|XP_001742589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779213|gb|EDQ92827.1| predicted protein [Monosiga brevicollis MX1]
Length = 880
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 238/440 (54%), Gaps = 32/440 (7%)
Query: 27 GLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLA---PNAPLLPSEITADLPAN 83
G+ L +++ SVL L+ + +L+++ + + ++ L P P P +T + +
Sbjct: 2 GMGLERVLLSVLALYCDPRLLVLVINVNQTEQELLMEDLTGIMPQHP--PMSMTNEQTSL 59
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R TLY G + FVT RIL+VD+LT RLP +AGL++ N H +T ++E FI R+ +
Sbjct: 60 ERETLYLRGGVVFVTSRILVVDMLTNRLPMDKVAGLVVANAHLVTPTTSEAFILRLYRHA 119
Query: 144 NREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVR 203
NR +I+A +D P A VSGF ER+++ L++ KLH+WPRFQ +V ++L+ +
Sbjct: 120 NRVGFIKAVTDNPYAFVSGFNTVERVLRCLWVTKLHIWPRFQRDVIKDLQVHENRLAVFE 179
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VP++K M +Q+A++ +M + L +++K +D+ LT E+GLF++F ILRRQLD +WH
Sbjct: 180 VPLTKNMARVQQALVRLMSSSLTQLKKLRPSLDMTHLTAESGLFQNFSTILRRQLDGVWH 239
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE---SFRSVWIFAESSYKI 319
+GK+T+QL+ DL TLR L +L +YDAVT+ YL TLR SE + S W+ +++ +
Sbjct: 240 TIGKQTRQLIKDLSTLRDLAVFLDQYDAVTFYHYLQTLRASEYAFTHTSYWVLLDATDDL 299
Query: 320 FDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKK-VDNNEDEDGGTSSTSTKVVLEEVL 378
F++AK RV+ + TG+ R+ +D D +
Sbjct: 300 FEFAKCRVFPRDADAAPGSETEKTDATGRARRAASGIDPAVDR----------------I 343
Query: 379 EEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
E PKW +E ++ + Q ++ L LV +DE + QL +
Sbjct: 344 ERNPKWSAYQEQID------IWQRAAEVSPPLWRPNQPCCRTLVLVRDERTARQLRAVMH 397
Query: 439 NGSEKVMREEWEKYLLSKVQ 458
G E V+ + +Y +V+
Sbjct: 398 RGQEYVLNMQLRRYRAWRVR 417
>gi|367042088|ref|XP_003651424.1| hypothetical protein THITE_68668 [Thielavia terrestris NRRL 8126]
gi|346998686|gb|AEO65088.1| hypothetical protein THITE_68668 [Thielavia terrestris NRRL 8126]
Length = 943
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 245/456 (53%), Gaps = 59/456 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL E LV+L+ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 22 LIYQQKLFEELRNEDE--LVVLARGLGLIRLVTNLLHSYDAAGSNLIVVVGAEDRENAWI 79
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P A L T R +Y+ G IF +T RIL+VD+LT L
Sbjct: 80 GEALAEHAAISMSPRARGLTVVNTDFTSVAAREKMYAEGGIFSITSRILVVDMLTGLLNP 139
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GF+ +M++L
Sbjct: 140 ETITGVVVLHADRVVATSLEAFILRIYRQKNKVGFLKAFSDNPDPFATGFSPLSTMMRNL 199
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V+V++ LE ++ V+++ VPM+ M IQ A++E ++ + E++K N
Sbjct: 200 FLRKASLWPRFHVHVAQALEGKKKAEVIELEVPMTDAMREIQNAVMECVEVSIHELKKAN 259
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D+ED +++ L K+FD I+RRQLDP WH + KTKQ+V+DL LR +L ++ DAV
Sbjct: 260 TGLDMEDWNLDSALLKNFDVIVRRQLDPNWHRVSWKTKQIVNDLTVLRGMLQSVLSLDAV 319
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ IFD AK+RVY ++ G +
Sbjct: 320 SFLQHLDTIHAAHSPPPGSTRQTQSPWLFLDAAQTIFDTAKRRVYSSSQRAGPD------ 373
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
T+ L VLEE PKW VL EVL EI+ + + +
Sbjct: 374 ------------------------TANIDALRPVLEEQPKWAVLAEVLSEIDRDLYFEPA 409
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
+R ++ +G VL+ C D +C QL D ++
Sbjct: 410 AR--------DDSNGTVLIMCSDTNTCRQLRDYLQT 437
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALESDQPILDILKPFVI 646
M E E+E + K + D E D + + VH Y + D+ IL+ +KP I
Sbjct: 549 MAEVQITEEETKQKEDIVADPLEDMDDYYQLYEMQDLVVVHAYDGDQDEHILEEVKPKYI 608
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
V+Y PD +F+R++EVY++ + ++VYFL+Y S E Q++ + +RRE AF LI++++
Sbjct: 609 VMYEPDAAFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSTVRREKDAFTKLIKERA 668
Query: 707 FMMI 710
M +
Sbjct: 669 SMSV 672
>gi|389646611|ref|XP_003720937.1| DNA repair protein rad16 [Magnaporthe oryzae 70-15]
gi|86196512|gb|EAQ71150.1| hypothetical protein MGCH7_ch7g557 [Magnaporthe oryzae 70-15]
gi|351638329|gb|EHA46194.1| DNA repair protein rad16 [Magnaporthe oryzae 70-15]
gi|440472236|gb|ELQ41112.1| DNA repair protein rad16 [Magnaporthe oryzae Y34]
gi|440482198|gb|ELQ62713.1| DNA repair protein rad16 [Magnaporthe oryzae P131]
Length = 960
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 249/457 (54%), Gaps = 54/457 (11%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLK-SQI 61
LE+ Q + EL + L+I++ GL L +L+ ++L + + L+L+ ++ + I
Sbjct: 19 LEYQQSVFQEL--RADDQLIIIARGLGLMRLVTNLLHSYDAAGNNLVLVVNADEREIGWI 76
Query: 62 IHYLAPNAPLLPSEITADLPA--------NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + L R LY+ G IF VT RIL+VDLLT L
Sbjct: 77 GEALAEHAAISASPLARGLTVVNTDFTNVGQRERLYAGGGIFSVTSRILVVDLLTGLLDP 136
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ G+++L+ + S E FI RI + N+ +++A SD P A GFA +M+++
Sbjct: 137 VSITGIVLLHADKVVATSLEAFILRIYRQKNKVGFLKALSDNPEAFTYGFAPLATMMRNM 196
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF ++V++ LE ++ VV++ V M++ M IQ AI+E ++ + E++K N
Sbjct: 197 FLRKASLWPRFHISVAKSLEGKKTAEVVELEVQMTEAMNTIQTAIMECVEVSIHELKKGN 256
Query: 233 K---VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
+D+ED +++ L ++FD +RRQL+P WH + KTKQ+V DL LR +L +V D
Sbjct: 257 SGQLLDMEDWNLDSALTQNFDVSIRRQLNPNWHRVSWKTKQIVGDLTVLRGMLHSVVSLD 316
Query: 290 AVTYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
AV++L+ LDT+ + +S W+F +++ IF+ AKKRVY +
Sbjct: 317 AVSFLQLLDTIHAAHKPPPGSTRQTQSPWLFLDAAQTIFETAKKRVYAAS---------N 367
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
++SVT E G +S + L+ VLEE PKW VL +VL EIE + +
Sbjct: 368 TRSVTSGT-----------EIGTNASLDS---LQPVLEEQPKWSVLADVLTEIERDTYFE 413
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
+SR G+ N G +L+ C D +C QL D ++
Sbjct: 414 PTSR------GDSN--GTILIMCSDTNTCRQLRDFLQ 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 59/87 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y + D+ +L+ +KP +V+Y PD SF+R++EVY++ + ++VYF++Y S E Q
Sbjct: 599 VHAYDGDQDEHVLEEVKPRYVVMYEPDASFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQ 658
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + IRRE +F L+++++ M I I
Sbjct: 659 RYLSTIRREKDSFTKLLKERASMAITI 685
>gi|432108564|gb|ELK33273.1| DNA repair endonuclease XPF [Myotis davidii]
Length = 902
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 246/459 (53%), Gaps = 66/459 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLDA--DGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNGRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDT------------------- 173
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 174 -------VNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 226
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++
Sbjct: 227 SLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLES 286
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR +E +F S W+F +SS +F A+ RVYR + ++ K + +KV+
Sbjct: 287 LRATEKAFGQNSGWLFLDSSTSMFVNARARVYRVPDA----------KMSKKGKMSEKVE 336
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E+++ E VLE PKW+ L EVL+EIE E +S E L
Sbjct: 337 IKEEQETKK---------ELVLESNPKWEALTEVLKEIEAE-----NSESEAL-----GG 377
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL + I G+E ++ R+ +EK
Sbjct: 378 PGQVLICASDDRTCSQLREYITMGAEAFLLRLYRKAFEK 416
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K+ ++ +L +D A P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 504 KQEEFDLNLSSDAAYGILKDPLIIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 563
Query: 658 QIEVYKAENPSIKLK------------VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQK 705
Q+E+Y+A P L+ VYFL Y STE Q++ +R+E AFE LIR+K
Sbjct: 564 QLEIYRASRPGKPLRQVIKSVECELHLVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREK 623
Query: 706 SFMMIP 711
+ M++P
Sbjct: 624 ASMVVP 629
>gi|321455581|gb|EFX66710.1| hypothetical protein DAPPUDRAFT_331812 [Daphnia pulex]
Length = 818
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 246/454 (54%), Gaps = 54/454 (11%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L+F + ++L E GLVI + G+ L + ++L ++S + +++L ++P +
Sbjct: 1 MLDFENQMFLDILNE--DGLVIAAKGIGLESVFINLLKVYSDAGNLVIVLGTTPKEEEFF 58
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L + LP +T++ N R ++Y G + F + RIL+VD+L R+P + G++
Sbjct: 59 TGELDSMGVKPLPKLLTSEFSVNDRQSVYMEGGVIFSSSRILVVDMLMDRMPIDLVTGML 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
I H + E S E FI R+ + N++ +I+AFS P + GF++ R+MKSL++R L L
Sbjct: 119 IYKAHRIIETSQEAFILRLYRQKNKKGFIKAFSSSPISFTRGFSQVTRVMKSLYVRNLFL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF + L+ P VV++R+P++ YM +Q AIL+++ +KE+R+ N +D++++
Sbjct: 179 WPRFHATIQSTLKENQPDVVELRLPLTPYMVTMQTAILDLIHFSVKELRRINPSLDLDEM 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN L K F +I++ QL+P+WH L KTKQL+ DL LR LL L +YD VT+ + +
Sbjct: 239 TVENALSKCFKKIIKFQLEPVWHQLSGKTKQLLEDLGILRNLLLTLTQYDCVTFNVVVKS 298
Query: 300 LRVSE-SFRSV-WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
L+ +E + +S W+ +++ +F K RVY G+S
Sbjct: 299 LKTTEKALKSAGWMLLDAAENLFITTKARVY-----------GKSL-------------- 333
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
+ED LEE PKW L EVL+EI R E+ + GE+
Sbjct: 334 --EEDAKPE-----------LEENPKWIALAEVLKEI----------RLEIAVQGEQFPS 370
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
L+ +D+ +C QL + +GS++ + + ++K
Sbjct: 371 IKTLIVAEDDRTCDQLRQILESGSKEFLEKIFKK 404
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
L P +++Y D+SF+RQ+EVY+A + ++VYF+FY+ S E Q + +R+E AFE
Sbjct: 456 LCPRFVIMYDCDVSFIRQVEVYQATHKEHTVRVYFMFYDASAEEQSYLTSLRKEKEAFEM 515
Query: 701 LIRQKSFMMIPIDQ 714
LIR+K+ M+IP D+
Sbjct: 516 LIREKATMVIPEDR 529
>gi|340975666|gb|EGS22781.1| hypothetical protein CTHT_0012560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 957
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 247/456 (54%), Gaps = 60/456 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL +E LV+L+ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 19 LIYQQKLFEELRKEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIVIIGADDRENAWI 76
Query: 63 -HYLAPNAPLLPSEITADLPANH--------RHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + L + R +Y++G IF +T RIL+VD+LT L
Sbjct: 77 GEALAEHAAVSLSPLARGLTVVNTDYTSVASREKMYAAGGIFSITSRILVVDMLTGLLNP 136
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I+L+ + S E FI RI + N+ +++AFSD P +GF+ +M++L
Sbjct: 137 ETITGMIVLHADKVIATSLEAFILRIYRQKNKVGFLKAFSDNPEPFSTGFSPLATMMRNL 196
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V+V++ LE ++ V+++ VPM++ M IQ A+LE ++ ++E++K N
Sbjct: 197 FLRKASLWPRFHVHVAQALEGKKKAEVIELEVPMTEAMRDIQNAVLECVEVSIQELKKCN 256
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D+ED V+N L +FD ++RRQLDP WH + KTKQ+VSDL LR +L ++ D V
Sbjct: 257 PGLDMEDWNVDNALLANFDVLIRRQLDPNWHRVSWKTKQIVSDLSVLRGMLQSVLALDCV 316
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L+ LDT+ + S +S W+F +++ IF+ A++RVY SK
Sbjct: 317 SFLQQLDTIHAAHSPAPGSTRQTQSPWLFLDAAQTIFETARRRVY------------SSK 364
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
G ST L VLEE PKW VL E+L EI+ + +
Sbjct: 365 QKAG-------------------PNSTIESLRPVLEEQPKWAVLAEILGEIDRDLYFEPP 405
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
+R ++ +G +L+ C D +C QL D ++
Sbjct: 406 AR--------DDSNGTILIMCTDTNTCRQLRDYLQT 433
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 59/87 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ +L+ +KP I++Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 587 IHAYEGDQDEHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGGSVEEQ 646
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++++ M + +
Sbjct: 647 RYLSSVRREKDAFTKLIKERATMSLTL 673
>gi|336364595|gb|EGN92951.1| hypothetical protein SERLA73DRAFT_127060 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378509|gb|EGO19667.1| hypothetical protein SERLADRAFT_374385 [Serpula lacrymans var.
lacrymans S7.9]
Length = 937
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 238/432 (55%), Gaps = 26/432 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ E+ L+IL+ GL L +L+ +++ ++ Q +LL+++S +S I
Sbjct: 4 LLPFHKEILEEIHDPSTSELLILARGLGLRRLLCTLMQIYESPQTLVLLVNASQEEESAI 63
Query: 62 IHYLAPNAPLLPSE--ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P + +L R LY G + VT RIL+VD+L +P + + G+
Sbjct: 64 GEELGIMGCRKPGLRLVGYELGKKDRQELYKKGGLISVTSRILVVDMLQSDIPINLITGI 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
IIL+ +T S E FI R+ + N +++AF+D+P + SG + + IMK L +R +H
Sbjct: 124 IILHAERVTALSLEAFIVRLYREKNSAGFLKAFTDQPEHITSGMSPLKNIMKELQLRTVH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
++PRF + LE V+++ +++ M I AI++ M L E++++N +D++D
Sbjct: 184 IYPRFHETIKSTLESRKADVIELYQRLTEPMEDIHHAIVQCMTTTLSELKRSNTTLDLDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L +E+ F+SFD ++RRQLDP+WH +G KTKQLVSDL TLR+LL+YL+ YD++++ YL+
Sbjct: 244 LNIESAYFRSFDMVVRRQLDPVWHKVGPKTKQLVSDLATLRQLLNYLLTYDSLSFHAYLE 303
Query: 299 TLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKS----- 344
L S + +S W+ +++ IF AK+R Y T + S +
Sbjct: 304 ALVASNTINATGNARQHQSPWMLTDAANVIFQTAKRRCYTVTSAKRKSTAESSNADVLDD 363
Query: 345 -------VTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE 397
+ R+ NN+ ++ + + + VLEE PKW +L ++L+EIEEE
Sbjct: 364 ADAWDALYEAEGRQPPNAGNNQGKEARKAWLPDGI--DPVLEELPKWDLLADILQEIEEE 421
Query: 398 RLKQASSREEVL 409
++Q S VL
Sbjct: 422 MIRQESLSTTVL 433
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 623 VPP-----VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLF 677
VPP V Y+ + D +L +KP IV++ P + F+R+IEVYK +P + ++VYF+
Sbjct: 564 VPPQQTIIVRAYSDDVDDQVLWEVKPRFIVMFEPSLEFIRRIEVYKNSSPGLGVRVYFMI 623
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
Y+ S E K+ AG+RRE +FE LI+++ M++PI Q
Sbjct: 624 YQLSCEEHKYLAGLRREKESFERLIKERGSMLLPIFQT 661
>gi|430812147|emb|CCJ30420.1| unnamed protein product [Pneumocystis jirovecii]
Length = 914
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 246/460 (53%), Gaps = 68/460 (14%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+ L + Q ++ E+ E GLVIL+ GL L ++A+ LLHS + L L N K +
Sbjct: 17 LFLSYQQVLVHEIYNE--NGLVILAKGLGLLNIVAN--LLHSYNLPGCLTLVIGANAKQE 72
Query: 61 -----IIHYLAPNAPLLPSE----ITADLPANH-RHTLYSSGQIFFVTPRILIVDLLTQR 110
++ L + +P E I + +H R ++Y+SG +F VT RIL+VDLLT
Sbjct: 73 ELLKEMVDELGASDNEVPREEFKIINNESGNSHKRESIYNSGGVFSVTSRILVVDLLTGI 132
Query: 111 LPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIM 170
+ ++G++ LN E S E FI RI + N+ YI+AFSD P A G + IM
Sbjct: 133 IDPVKISGIVALNAEKAIETSLEAFILRIFRKNNKVGYIKAFSDSPEAFNVGLSPLSNIM 192
Query: 171 KSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
++ F +K+ F V V+E LE + VV++ V M++ M IQ AI+E M+ C+ ++
Sbjct: 193 RAFFFKKI-----FHVLVAESLESKKVNVVELDVSMTESMKNIQYAIVECMEICISGLKS 247
Query: 231 TN--KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
N KVDVED ++N L KSFD ++RRQLD WH++ +KTKQL+SDL TLR +L YL+ Y
Sbjct: 248 ANSGKVDVEDWNLDNALHKSFDIMIRRQLDFHWHLVSQKTKQLLSDLTTLRHILHYLLSY 307
Query: 289 DAVTYLKYLDTLRVSESF--------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNG 340
D V++ K L+T+ ++ES +S W+ +++ IF AK+RVY
Sbjct: 308 DCVSFYKILETILIAESSTSEIEKREQSPWLLLDAANTIFKLAKERVY------------ 355
Query: 341 QSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE-RL 399
K V +K ++ E G+ + VLE PKW VLRE++ EIE E RL
Sbjct: 356 --KKVVPEKIYVQ-------ESYGS--------ILPVLENQPKWDVLREIMHEIETEIRL 398
Query: 400 KQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
R N VL+ CK E +C Q+++ + N
Sbjct: 399 NPELHR---------NSDCAVLIMCKSEYTCHQIQEYLHN 429
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y+ + D L LKP I++Y PD +R+IEVY + + L+VYF++Y +S E QK+
Sbjct: 574 YSGDVDDITLKELKPKFIILYEPDPVIIRRIEVYNSVYKNALLRVYFMYYGNSIEEQKYL 633
Query: 689 AGIRRENGAFESLIRQKSFMMIPIDQ 714
A +R+E +F LI++K M + + Q
Sbjct: 634 AAVRKEKDSFTKLIQEKGNMAVLLTQ 659
>gi|303318499|ref|XP_003069249.1| ERCC4 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240108935|gb|EER27104.1| ERCC4 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 988
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 245/456 (53%), Gaps = 58/456 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L +++ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDVFQELRAE--DKLVILAQGLGLLRIVTNLLHAYDAAGNNLVLVIGANDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY PL L T + R LY+ G I VT RILIVDLL++ L
Sbjct: 74 GEALAEHYAVSKTPLARGLKVINTDKATVSMRQKLYAQGGILSVTSRILIVDLLSKLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G++IL+ + S E FI R+ + N+ +++AFSD P +GF+ ++++L
Sbjct: 134 ETITGMVILHAERVISTSLEAFIIRVYRQFNKAGFLKAFSDTPEPFTTGFSPLANMLRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++ ++E++K+N
Sbjct: 194 FLQKSSLWPRFQVTVAESLEGRKRAEVIELEIPMTDKMREIQNAVLECVEVSIRELKKSN 253
Query: 233 KV-DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
V D++D VE+ L K+FD +++RQLDP WH + KTKQ+VSDL L+ +L L+ DAV
Sbjct: 254 PVLDIDDWNVESALQKNFDVVIQRQLDPNWHRVSVKTKQIVSDLTILKNILHLLLTDDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ +KY+DT+ + S S W++ E+++ + A+ RVYR G+
Sbjct: 314 SLIKYIDTVIAAHSPPPGYTKQTYSPWLYLEAAHVLLQTARSRVYR----------GKFD 363
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ L K+ + LE VLEE PKW VL +VL EI+
Sbjct: 364 TRAKLSDPLSKIPAS---------------LEPVLEEQPKWSVLVDVLNEID-------- 400
Query: 404 SREEVLLDGEENDHG--IVLVACKDECSCMQLEDCI 437
++ LD +D +L+ C D +C Q+ + +
Sbjct: 401 --RDLYLDPRPSDDSNRTILIMCSDRKACRQVREYL 434
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +P IV+Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 597 IHAYDGDMDEHILEEARPRYIVMYEPDAAFIRRVEVYRSSHTDRNVRVYFMYYGGSVEEQ 656
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + +
Sbjct: 657 RYLSAVRREKDAFTKLIKEKGSMAMSL 683
>gi|320036899|gb|EFW18837.1| DNA repair protein RAD1 [Coccidioides posadasii str. Silveira]
Length = 988
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 245/456 (53%), Gaps = 58/456 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L +++ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDVFQELRAE--DKLVILAQGLGLLRIVTNLLHAYDAAGNNLVLVIGANDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY PL L T + R LY+ G I VT RILIVDLL++ L
Sbjct: 74 GEALAEHYAVSKTPLARGLKVINTDKATVSMRQKLYAQGGILSVTSRILIVDLLSKLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G++IL+ + S E FI R+ + N+ +++AFSD P +GF+ ++++L
Sbjct: 134 ETITGMVILHAERVISTSLEAFIIRVYRQFNKAGFLKAFSDTPEPFTTGFSPLANMLRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++ ++E++K+N
Sbjct: 194 FLQKSSLWPRFQVTVAESLEGRKRAEVIELEIPMTDKMREIQNAVLECVEVSIRELKKSN 253
Query: 233 KV-DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
V D++D VE+ L K+FD +++RQLDP WH + KTKQ+VSDL L+ +L L+ DAV
Sbjct: 254 PVLDIDDWNVESALQKNFDVVIQRQLDPNWHRVSVKTKQIVSDLTILKNILHLLLTDDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ +KY+DT+ + S S W++ E+++ + A+ RVYR G+
Sbjct: 314 SLIKYIDTVIAAHSPPPGYTKQTYSPWLYLEAAHVLLQTARSRVYR----------GKFD 363
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ L K+ + LE VLEE PKW VL +VL EI+
Sbjct: 364 TRAKLSDPLSKIPAS---------------LEPVLEEQPKWSVLVDVLNEID-------- 400
Query: 404 SREEVLLDGEENDHG--IVLVACKDECSCMQLEDCI 437
++ LD +D +L+ C D +C Q+ + +
Sbjct: 401 --RDLYLDPRPSDDSNRTILIMCSDRKACRQVREYL 434
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +P IV+Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 597 IHAYDGDMDEHILEEARPRYIVMYEPDAAFIRRVEVYRSSHTDRNVRVYFMYYGGSVEEQ 656
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + +
Sbjct: 657 RYLSAVRREKDAFTKLIKEKGSMAMSL 683
>gi|293339854|ref|XP_001077374.2| PREDICTED: DNA repair endonuclease XPF [Rattus norvegicus]
Length = 627
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 249/477 (52%), Gaps = 59/477 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP------ 55
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGADRLLYLFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 56 --NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLP- 112
LK++ + +L + E A + + +I + IL++D +L
Sbjct: 73 INQLKTEGVKHLK-DLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILVMDDQNNKLSK 131
Query: 113 ----------TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSG 162
+ +++ H + E+ E FI R+ + N+ +I+AF+D A +G
Sbjct: 132 IVTKHTVLNESKTWLSILVYRAHRIIESCQEAFILRLFRQKNKLGFIKAFTDNAVAFDTG 191
Query: 163 FAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMD 222
F ER+M++LF++KL+LWPRF V V+ LE+ P VV++RV M+ M IQ AIL+V++
Sbjct: 192 FCHVERVMRNLFMKKLYLWPRFHVAVNSFLEQHKPEVVEIRVSMTLAMLAIQTAILDVLN 251
Query: 223 ACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKL 281
ACLKE++ N ++VEDL++EN L K FD+ + LDP+WH LG KTK LV DLK LR L
Sbjct: 252 ACLKELKYHNLSLEVEDLSLENALGKPFDKTICHYLDPLWHQLGAKTKSLVQDLKILRTL 311
Query: 282 LDYLVRYDAVTYLKYLDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVEL 338
L YL +YD VT+L L++LR +E S W+F ++S +F A+ RVYR
Sbjct: 312 LQYLSQYDCVTFLNLLESLRATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDV----- 366
Query: 339 NGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEER 398
KL K ++ G TK E VLE PKW+ L EVL+EIE E
Sbjct: 367 ------------KLSKKTKTSEKMAGPEEQETKK--ELVLESNPKWEALTEVLKEIETE- 411
Query: 399 LKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
++E L G G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 412 -----NKESEALGGP----GQVLICASDDRTCCQLRDYLTAGAEAFLLRLYRKTFEK 459
>gi|325185939|emb|CCA20443.1| DNA repair endonuclease XPF putative [Albugo laibachii Nc14]
Length = 936
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 248/464 (53%), Gaps = 38/464 (8%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKS--Q 60
L F + I EL E L+++ GL L +++ + +H + ++ L+ + + + Q
Sbjct: 21 LPFEKDIFEELYDE--DALLVMGKGLGLSRILTCFIRMHCSREHFVICLNMNDHAVNMHQ 78
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ LP I A + R LY G + +T RIL+VD L RL + + GL+
Sbjct: 79 ILISRGVTLEALPKVIDAKTSVHDRTQLYKLGGCYLITSRILVVDFLLNRLDSKRITGLL 138
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ + H +TE S E F R+ + NR +++AFSD + GF + E+ +++L++R+ L
Sbjct: 139 VHDAHRVTETSIEAFAVRLYREQNRFGFVKAFSDDAVTLSCGFNRMEQALRNLYLRQAVL 198
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDL 239
+PRF V++ + + P V ++ V + M IQ AIL ++A LKE+ R T + DL
Sbjct: 199 YPRFHVSIHRCFQAKQPTVYEIAVDKTPPMKAIQDAILIAIEATLKEIQRSTRYLGDMDL 258
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL-- 297
+++ + KSF +RRQLDP WH L KTKQLVSDL TLR+LL YL+ YDA+++ +L
Sbjct: 259 SMDAVMEKSFLSFIRRQLDPNWHKLSAKTKQLVSDLGTLRQLLGYLMSYDAISFYDFLLN 318
Query: 298 -DTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
+T+ + S W+F E++ ++ AK+RV++ + G+S V G+
Sbjct: 319 HETVSGQQRVPSPWLFTEAADMLYTSAKERVFQVMEKN----TGKSIHVRGR-------- 366
Query: 357 NNEDEDGGTSSTSTK----VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG 412
G S+ + V L LE PKW+ L + L+EIE ER K+A S G
Sbjct: 367 ------GAVKSSQLRSIEQVELRLTLECNPKWEALAQTLDEIEMEREKEAKST----FWG 416
Query: 413 EENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSK 456
E G VLV KD+ +C QL + G +++M++++ +Y + K
Sbjct: 417 E----GCVLVMVKDDRTCAQLLKFLSLGGKEMMKQQFGQYAMRK 456
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
L+ + P +++Y P+M+F+R++E++ A + + ++VYF+ Y S E + + I +E
Sbjct: 579 FLNRMLPRAVILYDPNMTFIRELEMFHA-SQDVNMEVYFMLYHQSVEEKMYLQEISQEKS 637
Query: 697 AFESLIRQKSFMMIP 711
AFE LI QK+ ++IP
Sbjct: 638 AFERLIHQKAHLVIP 652
>gi|449277435|gb|EMC85600.1| DNA repair endonuclease XPF, partial [Columba livia]
Length = 848
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 242/456 (53%), Gaps = 61/456 (13%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP +T ++ N R+ Y+ G + F T RIL+VD LT R+P + + G+++ H + E+
Sbjct: 15 LPRRVTNEITNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGILVYKAHRIIESC 74
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTE-RIMKSLFIRKLHLWP-RFQVNVS 189
E FI R+ + N+E +I+AF+D A +G R+ K + +P RF + V+
Sbjct: 75 QEAFILRLYRQKNKEGFIKAFTDNAVAFNTGLLLNNCRLSKPSMYILISCFPLRFHIAVN 134
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKS 248
LE+ P VV++ V M+ M IQ +IL++++ACL+E+++ N ++ EDL++EN + K
Sbjct: 135 SFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNPALEAEDLSLENAIGKP 194
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE-SF- 306
FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD +T+L L++L+ SE +F
Sbjct: 195 FDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCITFLNLLESLKASEKAFG 254
Query: 307 -RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS----KSVTGKKRKLKKVDNNEDE 361
S W+F +SS +F A+ RVYR +LN ++ KS K+ +LK+
Sbjct: 255 ENSGWLFLDSSTSMFVNARARVYRIADE---KLNQKAKVPEKSDVKKENELKR------- 304
Query: 362 DGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVL 421
E VLE PKW+ LREVL+EIE E ++ L G G VL
Sbjct: 305 -------------ELVLESNPKWEALREVLKEIENE------NKNSEDLGGP----GQVL 341
Query: 422 VACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILD 481
+ D+ +C QL + I G+E + + K + V + +K
Sbjct: 342 ICASDDRACAQLREYIIAGAEAFLTRLYNKTFGKDEKAAEVWITDRK------------- 388
Query: 482 GVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGK 517
PVK NA A + Q A LAA+SK +N+ K
Sbjct: 389 ---PVKSKGNARADA-GPQAKKAKLAASSK-QNKNK 419
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 507 AAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIE 566
A +++ N+ D E + + P + +G R GP SK N +
Sbjct: 363 AFLTRLYNKTFGKDEKAAEVWITDRKPVKSKGNARADAGPQAKKAKLAASSKQNKNKKQQ 422
Query: 567 DKPEISGSGNEGPADEIHSGVVGYSGGMLET---AFVEKEV--QWKRSLKTDTAESKDSK 621
++ I G +E V L + + E+ V + +L +D
Sbjct: 423 ERTIIQMMGKA--EEEKKEEVEAEDNKQLSSSPESNTEETVPEDFHVNLPSDCYYGIFKD 480
Query: 622 PVPPVH-------FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK-V 673
P+ +H YAL +L ++P +V+Y +++FVRQ+E+YKA P L+ V
Sbjct: 481 PLTIIHPLQGCTDPYALTR---VLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRQV 537
Query: 674 YFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
YFL Y STE Q++ +R+E AFE LIR+K+ M+IP
Sbjct: 538 YFLIYGGSTEEQRYLTALRKEKEAFEKLIREKAGMVIP 575
>gi|392350970|ref|XP_003750806.1| PREDICTED: DNA repair endonuclease XPF-like [Rattus norvegicus]
Length = 596
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 234/458 (51%), Gaps = 78/458 (17%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGADRLLYLFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
I+ L H + S +++
Sbjct: 73 INQLKTEG------------VKHLKVVSES---------------------------ILV 93
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+LW
Sbjct: 94 YRAHRIIESCQEAFILRLFRQKNKLGFIKAFTDNAVAFDTGFCHVERVMRNLFMKKLYLW 153
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
PRF V V+ LE+ P VV++RV M+ M IQ AIL+V++ACLKE++ N ++VEDL+
Sbjct: 154 PRFHVAVNSFLEQHKPEVVEIRVSMTLAMLAIQTAILDVLNACLKELKYHNLSLEVEDLS 213
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
+EN L K FD+ + LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++L
Sbjct: 214 LENALGKPFDKTICHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESL 273
Query: 301 RVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W+F ++S +F A+ RVYR KL K
Sbjct: 274 RATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDV-----------------KLSKKTK 316
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
++ G T TK E VLE PKW+ L EVL+EIE E ++E L G
Sbjct: 317 TSEKMAGPEGTETKK--ELVLESNPKWEALTEVLKEIETE------NKESEALGGP---- 364
Query: 418 GIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 365 GQVLICASDDRTCCQLRDYLTAGAEAFLLRLYRKTFEK 402
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 29/271 (10%)
Query: 448 EWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLA 507
+WE L++V L+ ++T +K+ ++ L G V I + + + +++ A
Sbjct: 340 KWEA--LTEV-LKEIETENKESEA--------LGGPGQVLICASDDRTCCQLRDYLTAGA 388
Query: 508 AASKIRNQGKS--DDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAI 565
A +R K+ DG E + + +G G R + NK+ S + A+
Sbjct: 389 EAFLLRLYRKTFEKDGKAEEVWVNFR---KGDGPKRTMKSDKRPKDAQNKERASTKRGAL 445
Query: 566 EDK-------PEISGSGNEGPAD-EIHSGVVGYSGGMLETAFVE-KEVQWKRSLKTDTAE 616
+ K ++ G+ E P + + + +G E E + + ++ +D A
Sbjct: 446 KRKKKRELTLTQVLGTAEEPPEEGAVEEDLHKQTGSSPEVCGGEIQHESFDLNVSSDAAY 505
Query: 617 SKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK 672
+P+ +H SD +L ++P +V+Y +++FVRQ+E+Y+A P L+
Sbjct: 506 GILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLR 565
Query: 673 VYFLFYEDSTEVQKFKAGIRRENGAFESLIR 703
VYF Y STE Q++ +R+E AFE LIR
Sbjct: 566 VYFFVYGGSTEEQRYLTALRKEKEAFEKLIR 596
>gi|429861882|gb|ELA36546.1| DNA repair protein [Colletotrichum gloeosporioides Nara gc5]
Length = 911
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 244/455 (53%), Gaps = 59/455 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL E LV+L+ GL L +L+ ++L + + L++L + + ++ I
Sbjct: 15 LEYQQTLFQELRNEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIILVGAEDRENNWI 72
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++PNA L T R +Y+ G IF +T RIL+VDLLT L T
Sbjct: 73 GEALAEHAAISMSPNARGLTVVNTDFTSVGAREKMYARGGIFSITSRILVVDLLTNLLDT 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI RI + N+ +++AF+D P +GF+ +M++L
Sbjct: 133 EKVTGLVVLHADRVVATSLEAFILRIYRQKNKAGFLKAFADNPDPFSTGFSPLSTMMRNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRF V V++ LE ++ V+++ + M+ M IQ +IL+ ++ + E++K N
Sbjct: 193 FLKKASLWPRFHVTVAQSLEGKKTAEVIELNITMTDSMRDIQNSILDCVEVSIHELKKGN 252
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+++ED +++ L K+FD I+RRQLDP WH + KT+Q+V+DL LR +L ++ DAV
Sbjct: 253 TGLEMEDWNLDSALHKNFDVIIRRQLDPNWHRVSWKTRQIVNDLSVLRGMLSSVLTLDAV 312
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ IF+ A++RVY SK
Sbjct: 313 SFLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQTIFETARRRVYA----------ASSK 362
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ T D N D L+ VLEE PKW L +VL EI+
Sbjct: 363 AATA--------DANIDS------------LKPVLEEQPKWAWLADVLTEIDNSMHFDPP 402
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
+R++ +G +L+ C D +C QL D ++
Sbjct: 403 ARDD--------SNGTILIMCGDTNTCRQLRDYLQ 429
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 72/122 (59%), Gaps = 7/122 (5%)
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALESDQPILDILKPFVI 646
M E E+E + K + D E+ + + + +H Y + D+ +L+ +KP I
Sbjct: 540 MAEVQITEEEAEQKPEIVIDPLENMEDYYQLYEMQDLVVIHAYDGDHDEHVLEEVKPRYI 599
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
++Y PD +F+R++EVY++ + ++VYFL+Y +S E Q++ + +RRE AF LI++++
Sbjct: 600 IMYEPDAAFIRRVEVYRSSHNDRNVRVYFLYYGESVEEQRYLSSVRREKDAFTKLIKERA 659
Query: 707 FM 708
M
Sbjct: 660 SM 661
>gi|392864802|gb|EAS30529.2| DNA repair protein (rad1) [Coccidioides immitis RS]
Length = 988
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 245/455 (53%), Gaps = 56/455 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + EL E LVIL+ GL L +++ ++L + + L+L+ + + +++ I
Sbjct: 16 LQYQQDVFQELRTE--DKLVILAQGLGLLRIVTNLLHAYDAAGNNLVLVIGANDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY PL L T + R LY+ G I VT RILIVDLL++ L
Sbjct: 74 GEALAEHYAVSKTPLARGLKVINTDKATVSMRQKLYAQGGILSVTSRILIVDLLSKLLDP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G++IL+ + S E FI R+ + N+ +++AFSD P +GF+ ++++L
Sbjct: 134 ETITGMVILHAERVVSTSLEAFIIRVYRQFNKAGFLKAFSDTPEPFTTGFSPLANMLRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++ ++E++K+N
Sbjct: 194 FLQKTSLWPRFQVTVAESLEGRKRAEVIELEIPMTDKMREIQNAVLECVEVSIRELKKSN 253
Query: 233 KV-DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
V D++D VE+ L K+FD +++RQLDP WH + KTKQ+VSDL L+ +L L+ DAV
Sbjct: 254 PVLDIDDWNVESALQKNFDVVIQRQLDPNWHRVSVKTKQIVSDLTILKNILHLLLTDDAV 313
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ +KY+DT+ + S S W++ E+++ + A+ RVYR G+
Sbjct: 314 SLIKYIDTVIAAHSPPPGYTKQTYSPWLYLEAAHVLLQTARSRVYR----------GKLD 363
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE-RLKQA 402
+ L K+ + LE VLEE PKW VL +VL EI+ + L
Sbjct: 364 TRAKLSDPLSKIPAS---------------LEPVLEEQPKWSVLVDVLNEIDRDLHLNPR 408
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI 437
S ++ + +L+ C D +C Q+ + +
Sbjct: 409 PS---------DDSNRTILIMCSDRKACRQVREYL 434
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +P IV+Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 597 IHAYDGDMDEHILEEARPRYIVMYEPDAAFIRRVEVYRSSHTDRNVRVYFMYYGGSVEEQ 656
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + +
Sbjct: 657 RYLSAVRREKDAFTKLIKEKGSMAMSL 683
>gi|169608720|ref|XP_001797779.1| hypothetical protein SNOG_07446 [Phaeosphaeria nodorum SN15]
gi|111063792|gb|EAT84912.1| hypothetical protein SNOG_07446 [Phaeosphaeria nodorum SN15]
Length = 948
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 291/601 (48%), Gaps = 115/601 (19%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LEF Q I EL +E L+ GL +++ ++L + + L+LL + + ++ I
Sbjct: 15 LEFQQDIFNELREEDELVLLARGLGLL--RIVTNLLHSYDAAGNNLILLVGAEDRENVWI 72
Query: 63 ------HYLAPNAPLLP--SEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
H NAP S + DL R +Y+ G IF +T RILIVD L+ L
Sbjct: 73 GEALAEHAAISNAPKCRGLSLVNTDLMSVGTREKMYAQGGIFSITSRILIVDFLSGLLNP 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GFA +MK+L
Sbjct: 133 ETVTGVVVLHAERVVATSLEAFILRIYRQKNKAGFLKAFSDTPEPFTTGFAPLTNMMKNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K L+PRF V V++ LE R+ V+++ VPM+ M IQ A+LE ++A + E++K N
Sbjct: 193 FLQKPALYPRFHVAVAKSLEGRKKAEVIELEVPMTDAMQDIQNAVLECVEASISELKKAN 252
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++V+D +++ L K+FD+I+RRQLDP+WH KT+Q+V DL LR +L L+ YDA+
Sbjct: 253 PGIEVDDWNIDSALHKNFDQIIRRQLDPVWHRTTFKTRQVVRDLSLLRSILHALLTYDAI 312
Query: 292 TYLKYLDTLRV--------SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ KYLDT+ ++ +S W+F +++ IF AK+RVY
Sbjct: 313 SFNKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIFTTAKRRVY--------------- 357
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVV---LEEVLEEAPKWKVLREVLEEIEEERLK 400
TGK V+ ST +V LE VLEE PKW L E+L+EIE++
Sbjct: 358 --TGKMSNADLVN------------STNLVPDSLEPVLEEFPKWAQLAEILQEIEQDTYF 403
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN-------GSEK---------- 443
+ ++ +G +L+ C D+ +C QL + ++ G+E
Sbjct: 404 NPTP--------QDTSNGSILIMCGDQGTCSQLREYLQTMYVIPEAGAEDDEGNDEPSAR 455
Query: 444 -VMREEWEKYLLSKVQL--------------------RSVQTSSKKKKSKEP-------K 475
+MR + YL K +SVQ+ ++ K P +
Sbjct: 456 FMMRRKLRSYLTWKRDFSRVSAALFSENQKAINNSNDKSVQSGMRQPSGKPPPNKRRRVR 515
Query: 476 GYGILDGVAPVKIAQNAEASSVSKQEHDALLAA--------ASKIRNQGKSDDGDNPETY 527
G G G P ++ A ++ K H A L A A++ + D DN E+Y
Sbjct: 516 GGGTA-GTGPSRMDSGAARTAGDKDAHIASLMAELQPTELEAAQKPGEIGHDPLDNMESY 574
Query: 528 Y 528
Y
Sbjct: 575 Y 575
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 60/88 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y+ + D+ IL+ KP I++Y PD +F+R++EVY++ + +KV+F++Y S E Q
Sbjct: 586 VHPYSGDLDEHILEETKPRYIIMYEPDAAFIRRVEVYRSSHTDRTVKVFFMYYGGSVEEQ 645
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPID 713
++ + +RRE AF LI++++ M + ++
Sbjct: 646 RYLSAVRREKDAFTRLIKERANMALTLN 673
>gi|347832218|emb|CCD47915.1| hypothetical protein [Botryotinia fuckeliana]
Length = 508
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 247/456 (54%), Gaps = 62/456 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN------ 56
L++ Q I EL Q+ LV+L+ GL L +L+ ++L + + L++L + +
Sbjct: 17 LKYQQEIFQELRQKDE--LVVLARGLGLLRLVTNLLHSYDAAGNNLIILVGADDRENGWI 74
Query: 57 ---LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L +AP A L T + R LY+ G IF +T RIL+VDLLT L T
Sbjct: 75 GEALAEHAAISMAPRARGLSVVNTDLMSVGTREKLYAQGGIFSITSRILVVDLLTSLLNT 134
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P +GF+ +M++L
Sbjct: 135 ETITGVVVLHADKVVATSLEAFILRIYRQKNKVGFLKAFSDNPEPFATGFSPLSTMMRNL 194
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+R + +WPRF +NV++ LE ++ V+++ V MS M IQ AI+E ++ + E++K+N
Sbjct: 195 FLRNVSIWPRFHINVAQALEGKKKAEVIELEVSMSDSMRDIQNAIMECVEVSIGELKKSN 254
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D V++ L K FD ++RRQLDP+WH + KTKQ+V+DL LR +L L+ YDAV
Sbjct: 255 SGLEMDDWNVDSALHKQFDMVIRRQLDPVWHRVSWKTKQIVNDLTVLRGMLHSLLTYDAV 314
Query: 292 TYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ ++LD + + +S W+F ++++ +FD AK+RVY
Sbjct: 315 SFNRHLDMILAAHQPPAGSTRQNQSPWLFLDAAHTVFDTAKRRVY--------------- 359
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK + VD+ L+ VLEE PKW VL EVL+EI+ +
Sbjct: 360 --TGKATRPDDVDS----------------LKPVLEEQPKWSVLAEVLDEIDRDLYFNP- 400
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
V +D + +G +L+ C D C QL + +++
Sbjct: 401 ----VPMD---DSNGTILIMCTDSAQCWQLREYLQS 429
>gi|367021706|ref|XP_003660138.1| hypothetical protein MYCTH_74974 [Myceliophthora thermophila ATCC
42464]
gi|347007405|gb|AEO54893.1| hypothetical protein MYCTH_74974 [Myceliophthora thermophila ATCC
42464]
Length = 947
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 247/456 (54%), Gaps = 59/456 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL ++ LVIL+ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 19 LIYQQKLFEELRKDDE--LVILARGLGLVRLVTNLLHSYDAAGNNLIVIVGADDRENAWI 76
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P A L T R +Y++G IF +T RIL+VD+LT L
Sbjct: 77 GEALAEHAAISMSPRARGLTVVNTDFTNVAAREKMYAAGGIFSITSRILVVDMLTGLLNP 136
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI RI + N+ +++AFSD P GF+ +M++L
Sbjct: 137 EIITGLLVLHADRVVATSLEAFILRIYRQKNKVGFLKAFSDNPDPFTIGFSPLATMMRNL 196
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK+ LWPRF V+V+E LE ++ V+++ VPM+ M IQ A++E ++ ++E++K+N
Sbjct: 197 FLRKVSLWPRFHVHVAEALEGKKKAEVIELEVPMTDAMRDIQNAVMECVEISIQELKKSN 256
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D++D +++ L K+FD I+RRQL+P WH + KTKQ+V+DL LR +L ++ DAV
Sbjct: 257 PGLDMDDWNLDSALLKNFDTIIRRQLEPNWHRVSWKTKQIVNDLTVLRSMLQSVLALDAV 316
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L+ LDT+ + S +S W+F +++ IF+ A++RVY ++ G
Sbjct: 317 SFLQQLDTIHAAHSPAPGSTRQTQSPWLFLDAAQTIFETARRRVYSSSQRAG-------- 368
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
T+ L VLEE PKW VL +VLEEI+ + + +
Sbjct: 369 ----------------------PDTANIDALRPVLEEQPKWAVLADVLEEIDRDLYFEPA 406
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
R ++ +G +L+ C D +C QL + ++
Sbjct: 407 VR--------DDSNGTILIMCSDTNTCRQLREYLQT 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALESDQPILDILKPFVI 646
M E E+E + K + +D E D + + +H Y + D+ +L+ +KP I
Sbjct: 544 MAEIQIREEETKQKEDVVSDPLEDMDDYYQLYEMQDLVVIHAYDGDMDEHVLEEIKPKYI 603
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
++Y PD +F+R+IEVY++ + ++VYFL+Y S E Q++ + +RRE AF LI++++
Sbjct: 604 IMYEPDAAFIRRIEVYRSSHNDRNVRVYFLYYGGSVEEQRYLSTVRREKDAFTKLIKERA 663
Query: 707 FM 708
M
Sbjct: 664 SM 665
>gi|315055791|ref|XP_003177270.1| DNA repair protein rad16 [Arthroderma gypseum CBS 118893]
gi|311339116|gb|EFQ98318.1| DNA repair protein rad16 [Arthroderma gypseum CBS 118893]
Length = 973
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 245/461 (53%), Gaps = 72/461 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q ++ EL E LV+L+ GL L ++I ++L + + L++L + + +++ I
Sbjct: 16 LQYQQDLLNELRSEDE--LVVLAQGLGLLRIITNLLHTYDAAGNNLIVLVGATDRENEWI 73
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY +PL L T + RH +YS G I VT RIL+VDLL++ L +
Sbjct: 74 GEALAEHYAVSKSPLARGLKVINTDRATVSTRHKMYSEGGIISVTSRILVVDLLSRLLDS 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+IIL+ K N++ ++AFSD P +GFA ++++L
Sbjct: 134 KLITGMIILHAE---------------KQYNKDGMLKAFSDSPEPFTTGFAPLSNMLRNL 178
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRFQV V+E LE V+++ VPM+ M IQ A+LE ++ ++E+++ N
Sbjct: 179 FLQKTSLWPRFQVTVAESLEGHRKAEVIELEVPMTDKMKEIQNAVLECVEVNIRELKRAN 238
Query: 233 K-VDV-EDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
+D+ +D TV++ L K+FD +RRQLDP+WH + +T+Q+ SDL LR +L L+ +DA
Sbjct: 239 TGLDIGDDWTVDSALHKNFDVAIRRQLDPVWHRVSFRTRQIASDLTVLRSILHSLLTFDA 298
Query: 291 VTYLKYLDTLRVSESF--------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V+ KYLDT+ + S S W+F E+++ +FD AK RVY+ SD +
Sbjct: 299 VSLNKYLDTVISAHSAPAGSTKQNYSPWLFLEAAHVLFDTAKSRVYKKKASDKTNI---- 354
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
SS+ LE +LEE PKW VL EVLEEIE++ +
Sbjct: 355 -----------------------SSSDIFNGLEPILEEQPKWAVLAEVLEEIEQDTYLNS 391
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEK 443
+ G + + +L+ C D+ +C Q+ + + +K
Sbjct: 392 A--------GPGSSNNAILIMCSDQQTCRQVREYLSTMHKK 424
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y + D+ +L+ L+P I++Y PD +F+R++EVY++ + ++VYF++Y +S E Q
Sbjct: 586 VHHYDGDMDEHVLEELRPRYIIMYEPDAAFIRRVEVYRSSHQERNVRVYFMYYGESVEEQ 645
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LI ++ M +
Sbjct: 646 RYLSAVRREKDAFTKLIHERGTMAM 670
>gi|429238685|ref|NP_587855.2| DNA repair endonuclease XPF [Schizosaccharomyces pombe 972h-]
gi|395398459|sp|P36617.2|RAD16_SCHPO RecName: Full=DNA repair protein rad16
gi|347834429|emb|CAA20694.2| DNA repair endonuclease XPF [Schizosaccharomyces pombe]
Length = 877
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 255/505 (50%), Gaps = 66/505 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL++E GL +++ GLSL ++ A+VL + LLL+ ++ + I
Sbjct: 9 LAYQQQVFNELIEE--DGLCVIAPGLSLLQIAANVLSYFAVPGSLLLLVGANVDDIELIQ 66
Query: 63 HYLAPN-APLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
H + + L + T + + R Y G IF +T RIL++DLLT+ +PT + G+++
Sbjct: 67 HEMESHLEKKLITVNTETMSVDKREKSYLEGGIFAITSRILVMDLLTKIIPTEKITGIVL 126
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
L+ + T FI R+ + N+ +I+AFSD P + G ++ LF+R + ++
Sbjct: 127 LHADRVVSTGTVAFIMRLYRETNKTGFIKAFSDDPEQFLMGINALSHCLRCLFLRHVFIY 186
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK--VDVEDL 239
PRF V V+E LE+ P VV++ V +S IQ +L +++ ++E+R+ N +D+ED
Sbjct: 187 PRFHVVVAESLEKSPANVVELNVNLSDSQKTIQSCLLTCIESTMRELRRLNSAYLDMEDW 246
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
+E+ L +SFD I+RRQLD +WH + KTKQLV DL TL+ LL LV YD V++LK LDT
Sbjct: 247 NIESALHRSFDVIVRRQLDSVWHRVSPKTKQLVGDLSTLKFLLSALVCYDCVSFLKLLDT 306
Query: 300 LRVSESFRSV--------WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
L +S + S W+ +++ K+ A+ RVY+ S+G ++
Sbjct: 307 LVLSVNVSSYPSNAQPSPWLMLDAANKMIRVARDRVYK--ESEGPNMDAIP--------- 355
Query: 352 LKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
+LEE PKW VL++VL E+ E + + D
Sbjct: 356 -------------------------ILEEQPKWSVLQDVLNEVCHETMLADT-------D 383
Query: 412 GEENDHGIVLVACKDECSCMQLEDCI------RNGSEKVMREEWEKYLLSKVQLRSVQTS 465
E +++ I ++ C DE +C+QL D + S K M + Y + Q R + S
Sbjct: 384 AETSNNSI-MIMCADERTCLQLRDYLSTVTYDNKDSLKNMNSKLVDYFQWREQYRKMSKS 442
Query: 466 SKK---KKSKEPKGYGILDGVAPVK 487
KK K +E GV P K
Sbjct: 443 IKKPEPSKEREASNTTSRKGVPPSK 467
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
++ Y E D+ +L+ L+P ++++ D +F+R++EVYKA P L+VYF++Y S E Q
Sbjct: 530 IYSYNGERDELVLNNLRPRYVIMFDSDPNFIRRVEVYKATYPKRSLRVYFMYYGGSIEEQ 589
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
K+ +RRE +F LI+++S M I
Sbjct: 590 KYLFSVRREKDSFSRLIKERSNMAI 614
>gi|297121|emb|CAA50599.1| rad16 [Schizosaccharomyces pombe]
Length = 892
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 255/505 (50%), Gaps = 66/505 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL++E GL +++ GLSL ++ A+VL + LLL+ ++ + I
Sbjct: 9 LAYQQQVFNELIEE--DGLCVIAPGLSLLQIAANVLSYFAVPGSLLLLVGANVDDIELIQ 66
Query: 63 HYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
H + + L + T + + R Y G IF +T RIL++DLLT+ +PT + G+++
Sbjct: 67 HEMESHLEKKLITVNTETMSVDKREKSYLEGGIFAITSRILVMDLLTKIIPTEKITGIVL 126
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
L+ + T FI R+ + N+ +I+AFSD P + G ++ LF+R + ++
Sbjct: 127 LHADRVVSTGTVAFIMRLYRETNKTGFIKAFSDDPEQFLMGINALSHCLRCLFLRHVFIY 186
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK--VDVEDL 239
PRF V V+E LE+ P VV++ V +S IQ +L +++ ++E+R+ N +D+ED
Sbjct: 187 PRFHVVVAESLEKSPANVVELNVNLSDSQKTIQSCLLTCIESTMRELRRLNSAYLDMEDW 246
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
+E+ L +SFD I+RRQLD +WH + KTKQLV DL TL+ LL LV YD V++LK LDT
Sbjct: 247 NIESALHRSFDVIVRRQLDSVWHRVSPKTKQLVGDLSTLKFLLSALVCYDCVSFLKLLDT 306
Query: 300 LRVSESFRSV--------WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
L +S + S W+ +++ K+ A+ RVY+ S+G ++
Sbjct: 307 LVLSVNVSSYPSNAQPSPWLMLDAANKMIRVARDRVYK--ESEGPNMDAIP--------- 355
Query: 352 LKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
+LEE PKW VL++VL E+ E + + D
Sbjct: 356 -------------------------ILEEQPKWSVLQDVLNEVCHETMLADT-------D 383
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRN------GSEKVMREEWEKYLLSKVQLRSVQTS 465
E +++ I ++ C DE +C+QL D + S K M + Y + Q R + S
Sbjct: 384 AETSNNSI-MIMCADERTCLQLRDYLSTVTYDNKDSLKNMNSKLVDYFQWREQYRKMSKS 442
Query: 466 SKK---KKSKEPKGYGILDGVAPVK 487
KK K +E GV P K
Sbjct: 443 IKKPEPSKEREASNTTSRKGVPPSK 467
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
++ Y E D+ +L+ L+P ++++ D +F+R++EVYKA P L+VYF++Y S E Q
Sbjct: 530 IYSYNGERDELVLNNLRPRYVIMFDSDPNFIRRVEVYKATYPKRSLRVYFMYYGGSIEEQ 589
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
K+ +RRE +F LI+++S M I
Sbjct: 590 KYLFSVRREKDSFSRLIKERSNMAI 614
>gi|302656669|ref|XP_003020086.1| hypothetical protein TRV_05859 [Trichophyton verrucosum HKI 0517]
gi|291183867|gb|EFE39462.1| hypothetical protein TRV_05859 [Trichophyton verrucosum HKI 0517]
Length = 860
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 296/625 (47%), Gaps = 137/625 (21%)
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
T I K N++ ++AFSD P +GFA ++++LF++K LWPRFQV V+E
Sbjct: 24 TGMIILHAEKQYNKDGMLKAFSDTPEPFTTGFAPLSNMLRNLFLQKTSLWPRFQVTVAES 83
Query: 192 LE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDV-EDLTVENGLFKS 248
LE V+++ VPM+ M IQ A+LE ++ ++E++++N +DV +D TV++ L K+
Sbjct: 84 LEGHRKAEVIELEVPMTDKMKEIQNAVLECVEVNIRELKRSNTGLDVGDDWTVDSALHKN 143
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF-- 306
FD +RRQLDP+WH + +T+Q+ SDL LR +L L+ +DAV+ KYLDT+ + S
Sbjct: 144 FDVAIRRQLDPVWHRVSFRTRQIASDLTVLRSILHSLLTFDAVSLNKYLDTVISAHSAPA 203
Query: 307 ------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNED 360
S W+F +++ +FD AK RVY KK+ +K
Sbjct: 204 GSTKQNYSPWLFLGAAHVLFDTAKSRVY-------------------KKKASEK------ 238
Query: 361 EDGGTSSTSTKVV--LEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
T+S+S+ + +E +LEE PKW VL EVL+EIE++ ++ G N+
Sbjct: 239 ----TTSSSSDIFNGIEPILEEQPKWAVLAEVLQEIEQDTYLNPAA------PGSSNN-- 286
Query: 419 IVLVACKDECSCMQL---------------------------EDCIRNGSEKVMREEWEK 451
+L+ C D+ +C Q+ ED ++ +MR + +
Sbjct: 287 AILIMCSDQQTCRQVREYLSTMHKKEKFFDKNEDDEAEIIPHEDEHHPSADTMMRRKLRE 346
Query: 452 YLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASK 511
YL K L +V K K KG + G + SSV+ Q H
Sbjct: 347 YLYWKRNLSNVNNHLYDVKPKT-KGIAEVPGFTSI--------SSVAPQGH--------- 388
Query: 512 IRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEI 571
+ P R + R + A + + + + ED PE+
Sbjct: 389 -----------------SGRAPPNKRRRVRGGSS-TASSSGAGRPAHGSVQVDTEDFPEV 430
Query: 572 SGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTA------ESKDSKPVPP 625
S E +++ A +E EVQ +L+ D E D +
Sbjct: 431 SNLSEE----------------VIQQAILE-EVQ-HITLEDDLQDMDNYYELYDVNDLLV 472
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y + D+ +L+ L+P I++Y PD +F+R++EVY++ + ++VYF++Y +S E Q
Sbjct: 473 VHHYDGDMDEHVLEELRPRYIIMYEPDAAFIRRVEVYRSSHQERNVRVYFMYYGESVEEQ 532
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LI ++ M +
Sbjct: 533 RYLSAVRREKDAFTKLIHERGTMAM 557
>gi|444727161|gb|ELW67666.1| DNA repair endonuclease XPF [Tupaia chinensis]
Length = 729
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 158/234 (67%), Gaps = 1/234 (0%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP +T ++P N R+ +Y+ G + F T RIL+VD LT R+P+ + G+++ H + E+
Sbjct: 33 LPRRVTNEIPNNGRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESC 92
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI R+ + N+ +I+AF+D A +GF E +M++LF++KL+LWPRF V V
Sbjct: 93 QEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVESVMRNLFVKKLYLWPRFHVAVHSF 152
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFD 250
LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL++EN + K FD
Sbjct: 153 LEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFD 212
Query: 251 EILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE 304
+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++LR SE
Sbjct: 213 KTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESLRASE 266
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD IL ++P +V+Y +++FVR
Sbjct: 342 KHEEFDLNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRILHEVEPRYVVLYDAELTFVR 401
Query: 658 QIEVYKAENPSIKLK-VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+ VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 402 QLEIYRASRPGKPLRQVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKATMVVP 456
>gi|164424249|ref|XP_964627.2| hypothetical protein NCU07440 [Neurospora crassa OR74A]
gi|157070437|gb|EAA35391.2| hypothetical protein NCU07440 [Neurospora crassa OR74A]
Length = 957
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 240/453 (52%), Gaps = 60/453 (13%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIH- 63
+ Q + EL +E LVIL+ GL L +LI ++L + + L+++ ++ + ++ I
Sbjct: 15 YQQKLFEELRKEDE--LVILARGLGLMRLITNLLHSYDAAGNNLIVVVNAEDRENAWIGE 72
Query: 64 --------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
++P A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 73 ALAEHAAISMSPKARGLTVVNTDFTSVGTREKMYAQGGIFSITSRILVVDLLTNLLNPET 132
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ G+++L+ + S E FI RI + N+ +++AFSD P GF+ +M+++F+
Sbjct: 133 ITGMLVLHADRIVATSLEAFIFRIYRQKNKVGFLKAFSDNPDPFTVGFSPLATMMRNMFL 192
Query: 176 RKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK- 233
RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 193 RKASLWPRFHVQVAQSLEGKKKAEVIELEVPMTDSMREIQTAIMECVEISIHELKKENTG 252
Query: 234 VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
+++ED +++ L ++FD ++RRQL+P WH + KTKQ+ DL LR +L L+ DAV++
Sbjct: 253 LEMEDWNLDSALTRNFDRMVRRQLEPNWHRVSWKTKQIAGDLTVLRGMLQSLLALDAVSF 312
Query: 294 LKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSV 345
L+ LDT+ + S W+F++++ IF+ A++RVY SK
Sbjct: 313 LQQLDTIHAAHKPAPGTTRQTESPWLFSDAAQTIFETARQRVY------------SSKQK 360
Query: 346 TGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
G ST L+ VLEE PKW VL +VLEEI+ + + + R
Sbjct: 361 AG-------------------PNSTIESLKPVLEEQPKWAVLADVLEEIDRDLYFEPAVR 401
Query: 406 EEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
++ +G +LV C D +C QL D ++
Sbjct: 402 --------DDSNGTILVMCADTDTCRQLRDYLQ 426
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 58/85 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ +L+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 587 IHAYEGDQDEHVLEEVKPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 646
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LIR+++ M I
Sbjct: 647 RYLSSVRREKDAFTKLIRERASMSI 671
>gi|310791066|gb|EFQ26595.1| DNA repair protein [Glomerella graminicola M1.001]
Length = 933
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 244/455 (53%), Gaps = 59/455 (12%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q++ EL E LV+L+ GL L +L+ ++L + + L++L + ++ I
Sbjct: 14 LEYQQNLFQELRNEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLVILVGADERENNWI 71
Query: 63 -HYLAPNAPLLPS-------EITADLPA-NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + D + R +Y G IF +T RIL+VDLLT +
Sbjct: 72 GEALAEHAAISMSLNARGLTVVNTDFTSVGTRERMYIRGGIFSITSRILVVDLLTNLIDA 131
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GLI+L+ + S E FI RI + N+ +++AFSD P GF+ +M++L
Sbjct: 132 EKITGLIVLHADRVVATSLEAFILRIYRQKNKAGFLKAFSDNPDPFSIGFSPLTTMMRNL 191
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK-T 231
F+RK LWPRF V V++ LE ++ V+++ + MS+ M IQ AI+E ++ + E++K
Sbjct: 192 FLRKASLWPRFHVTVAQSLEGKKTAEVIELNISMSEAMRDIQNAIMECVEVSIHELKKGN 251
Query: 232 NKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
N +++ED +++ L K+FD I+RRQLDP WH + KT+Q+V+DL LR +L ++ DAV
Sbjct: 252 NGLEMEDWNLDSALHKNFDVIIRRQLDPNWHRVSWKTRQIVNDLSVLRGMLQSVLTLDAV 311
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L++LDT+ + S +S W+F +++ IF+ A++RVY + SK
Sbjct: 312 SFLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQTIFETARRRVY----------SASSK 361
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
+ T + +D +L VLEE PKW L +VL EI+
Sbjct: 362 AATAE----ANID----------------LLRPVLEEQPKWAWLADVLTEIDNSMHFDPP 401
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
R++ +G +L+ C D +C QL D ++
Sbjct: 402 VRDD--------SNGTILIMCGDTNTCRQLRDYLQ 428
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 7/122 (5%)
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALESDQPILDILKPFVI 646
M E E+E + K + +D E+ + + + +H Y + D+ +L+ +KP I
Sbjct: 541 MAEVQITEEEAEQKPEIVSDPLENMEDYYQLYEMQDLVVIHAYDGDQDEHVLEEVKPRYI 600
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
++Y PD +F+R++EVY++ + ++VYF++Y +S E Q++ + +RRE AF LI++++
Sbjct: 601 IMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGESVEEQRYLSSVRREKDAFTKLIKERA 660
Query: 707 FM 708
M
Sbjct: 661 SM 662
>gi|119181320|ref|XP_001241881.1| hypothetical protein CIMG_05777 [Coccidioides immitis RS]
Length = 981
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 237/437 (54%), Gaps = 54/437 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII------HYLAPNAPL--- 71
LVIL+ GL L +++ ++L + + L+L+ + + +++ I HY PL
Sbjct: 25 LVILAQGLGLLRIVTNLLHAYDAAGNNLVLVIGANDRENEWIGEALAEHYAVSKTPLARG 84
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
L T + R LY+ G I VT RILIVDLL++ L + G++IL+ + S
Sbjct: 85 LKVINTDKATVSMRQKLYAQGGILSVTSRILIVDLLSKLLDPETITGMVILHAERVVSTS 144
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI R+ + N+ +++AFSD P +GF+ ++++LF++K LWPRFQV V+E
Sbjct: 145 LEAFIIRVYRQFNKAGFLKAFSDTPEPFTTGFSPLANMLRNLFLQKTSLWPRFQVTVAES 204
Query: 192 LE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV-DVEDLTVENGLFKSF 249
LE R+ V+++ +PM+ M IQ A+LE ++ ++E++K+N V D++D VE+ L K+F
Sbjct: 205 LEGRKRAEVIELEIPMTDKMREIQNAVLECVEVSIRELKKSNPVLDIDDWNVESALQKNF 264
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES---- 305
D +++RQLDP WH + KTKQ+VSDL L+ +L L+ DAV+ +KY+DT+ + S
Sbjct: 265 DVVIQRQLDPNWHRVSVKTKQIVSDLTILKNILHLLLTDDAVSLIKYIDTVIAAHSPPPG 324
Query: 306 ----FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDE 361
S W++ E+++ + A+ RVYR G+ + L K+ +
Sbjct: 325 YTKQTYSPWLYLEAAHVLLQTARSRVYR----------GKLDTRAKLSDPLSKIPAS--- 371
Query: 362 DGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE-RLKQASSREEVLLDGEENDHGIV 420
LE VLEE PKW VL +VL EI+ + L S ++ + +
Sbjct: 372 ------------LEPVLEEQPKWSVLVDVLNEIDRDLHLNPRPS---------DDSNRTI 410
Query: 421 LVACKDECSCMQLEDCI 437
L+ C D +C Q+ + +
Sbjct: 411 LIMCSDRKACRQVREYL 427
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +P IV+Y PD +F+R++EVY++ + ++VYF++Y S E Q
Sbjct: 590 IHAYDGDMDEHILEEARPRYIVMYEPDAAFIRRVEVYRSSHTDRNVRVYFMYYGGSVEEQ 649
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + +
Sbjct: 650 RYLSAVRREKDAFTKLIKEKGSMAMSL 676
>gi|350297545|gb|EGZ78522.1| DNA repair protein [Neurospora tetrasperma FGSC 2509]
Length = 954
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 240/453 (52%), Gaps = 60/453 (13%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIH- 63
+ Q + EL +E LVIL+ GL L +LI ++L + + L+++ ++ + ++ I
Sbjct: 12 YQQKLFEELRKEDE--LVILARGLGLMRLITNLLHSYDAAGNNLIVVVNADDRENAWIGE 69
Query: 64 --------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
++P A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 70 ALAEHAAISMSPKARGLTVVNTDFTSVGTREKMYAQGGIFSITSRILVVDLLTNLLNPET 129
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ G+++L+ + S E FI RI + N+ +++AFSD P GF+ +M+++F+
Sbjct: 130 ITGMLVLHADRIVATSLEAFILRIYRQKNKVGFLKAFSDNPDPFTVGFSPLATMMRNMFL 189
Query: 176 RKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK- 233
RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 190 RKASLWPRFHVQVAQSLEGKKKAEVIELEVPMTDSMREIQTAIMECVEISIHELKKENTG 249
Query: 234 VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
+++ED +++ L ++FD ++RRQL+P WH + KTKQ+ DL LR +L ++ DAV++
Sbjct: 250 LEMEDWNLDSALTRNFDRMVRRQLEPNWHRVSWKTKQIAGDLTVLRGMLQSILALDAVSF 309
Query: 294 LKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSV 345
L+ LDT+ + S W+F++++ IF+ A++RVY SK
Sbjct: 310 LQQLDTIHAAHKPAPGTTRQTESPWLFSDAAQTIFETARQRVY------------SSKQK 357
Query: 346 TGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
G ST L+ VLEE PKW VL +VLEEI+ + + + R
Sbjct: 358 AG-------------------PNSTIESLKPVLEEQPKWAVLADVLEEIDRDLYFEPAVR 398
Query: 406 EEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
++ +G +L+ C D +C QL D ++
Sbjct: 399 --------DDSNGTILIMCADTDTCRQLRDYLQ 423
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 584 IHAYEGDQDEHILEEVKPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 643
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LIR+++ M I
Sbjct: 644 RYLSSVRREKDAFTKLIRERASMSI 668
>gi|336463252|gb|EGO51492.1| hypothetical protein NEUTE1DRAFT_125187 [Neurospora tetrasperma
FGSC 2508]
Length = 960
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 241/455 (52%), Gaps = 60/455 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL +E LVIL+ GL L +LI ++L + + L+++ ++ + ++ I
Sbjct: 16 LVYQQKLFEELRKEDE--LVILARGLGLMRLITNLLHSYDAAGNNLIVVVNADDRENAWI 73
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISMSPKARGLTVVNTDFTSVGTREKMYAQGGIFSITSRILVVDLLTNLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+++L+ + S E FI RI + N+ +++AFSD P GF+ +M+++
Sbjct: 134 ETITGMLVLHADRIVATSLEAFILRIYRQKNKVGFLKAFSDNPDPFTVGFSPLATMMRNM 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 194 FLRKASLWPRFHVQVAQSLEGKKKAEVIELEVPMTDSMREIQTAIMECVEISIHELKKEN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+++ED +++ L ++FD ++RRQL+P WH + KTKQ+ DL LR +L ++ DAV
Sbjct: 254 TGLEMEDWNLDSALTRNFDRMVRRQLEPNWHRVSWKTKQIAGDLTVLRGMLQSILALDAV 313
Query: 292 TYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L+ LDT+ + S W+F++++ IF+ A++RVY SK
Sbjct: 314 SFLQQLDTIHAAHKPAPGTTRQTESPWLFSDAAQTIFETARQRVY------------SSK 361
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
G ST L+ VLEE PKW VL +VLEEI+ + + +
Sbjct: 362 QKAG-------------------PNSTIESLKPVLEEQPKWAVLADVLEEIDRDLYFEPA 402
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
R ++ +G +L+ C D +C QL D ++
Sbjct: 403 VR--------DDSNGTILIMCADTDTCRQLRDYLQ 429
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ IL+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 590 IHAYEGDQDEHILEEVKPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 649
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LIR+++ M I
Sbjct: 650 RYLSSVRREKDAFTKLIRERASMSI 674
>gi|392351041|ref|XP_003750828.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF [Rattus
norvegicus]
Length = 876
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 232/458 (50%), Gaps = 79/458 (17%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGADRLLYLFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
I+ L H + S +++
Sbjct: 73 INQLKTEG------------VKHLKVVSES---------------------------ILV 93
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF++KL+LW
Sbjct: 94 YRAHRIIESCQEAFILRLFRQKNKLGFIKAFTDNAVAFDTGFCHVERVMRNLFMKKLYLW 153
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
PRF V V+ LE+ P VV++RV M+ M IQ AIL+V++ACLKE++ N ++VEDL+
Sbjct: 154 PRFHVAVNSFLEQHKPEVVEIRVSMTLAMLAIQTAILDVLNACLKELKYHNLSLEVEDLS 213
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
+EN L K FD+ + LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++L
Sbjct: 214 LENALGKPFDKTICHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESL 273
Query: 301 RVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W+F ++S +F A+ RVYR KL K
Sbjct: 274 RATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDV-----------------KLSKKTK 316
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
++ G TK E VLE PKW+ L EVL+EIE E ++E L G
Sbjct: 317 TSEKMAGPEEQETKK--ELVLESNPKWEALTEVLKEIETE------NKESEALGGP---- 364
Query: 418 GIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
G VL+ C +C QL D + G+E ++ R+ +EK
Sbjct: 365 GQVLI-CASXRTCCQLRDYLTAGAEAFLLRLYRKTFEK 401
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYF Y STE Q++ + +E
Sbjct: 529 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFFVYGGSTEEQRYLTALCKEKE 588
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 589 AFEKLIREKASMVVP 603
>gi|402075145|gb|EJT70616.1| DNA repair protein rad16 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1000
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 240/457 (52%), Gaps = 40/457 (8%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLK-SQI 61
L + Q + EL E LV++S GL L +L+ ++L + + L+++ + + + I
Sbjct: 30 LAYQQDLFTELRAEDE--LVVISKGLGLMRLVTNLLHSYDAAGNNLVVIVGADDREIGWI 87
Query: 62 IHYLAPNAPLLPSEITADLPA--------NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + L R +Y+ G IF VT RILIVDLLT L
Sbjct: 88 GEALAEHAAISASPLARGLTVVNTDFTNVGQRERIYAQGGIFSVTSRILIVDLLTGLLDP 147
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ GL++L+ S E FI RI + N+ +++AFSD P GF+ +M+++
Sbjct: 148 VSITGLVLLHADRAVATSLEAFILRIYRQKNKVGFLKAFSDSPEPFTYGFSPLTTMMRNM 207
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF ++V+ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 208 FLRKASLWPRFHMSVAHSLEGKKTAEVIELEVPMTDSMSQIQAAIMECVEVSIHELKKGN 267
Query: 233 K--VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDA 290
+D+ED T+++ L K+FD ++RRQL+P WH L KTKQ+V DL LR LL +V DA
Sbjct: 268 SGLLDMEDWTLDSALTKNFDAVVRRQLEPSWHRLSWKTKQIVGDLSVLRGLLHSIVSLDA 327
Query: 291 VTYLKYLDTLRVSE-----SFRSV---WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQS 342
V++L+ LDT+ + S R W+F +++ IF+ KKRVY
Sbjct: 328 VSFLQQLDTILAAHKPPPGSNRQTQPPWLFLDAAQTIFELGKKRVY-------------- 373
Query: 343 KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQA 402
+ G + E+ + + L VLEE PKW VL +VL EI+ + L
Sbjct: 374 -AAVGTAAARTAAALGDAENQPSVPAPSLDALRPVLEEQPKWAVLADVLAEIDRD-LHFD 431
Query: 403 SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
S G+ N G +L+ C D +C QL D ++
Sbjct: 432 PSFTSGGGGGDSN--GTILIMCSDTNTCRQLRDFLQT 466
>gi|336264469|ref|XP_003347011.1| MEI9 protein [Sordaria macrospora k-hell]
gi|380093137|emb|CCC09375.1| putative MEI9 protein [Sordaria macrospora k-hell]
Length = 940
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 243/456 (53%), Gaps = 60/456 (13%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + Q + EL +E LVIL+ GL L +LI ++L + + L+++ ++ + ++ I
Sbjct: 16 LVYQQKLFEELRKEDE--LVILARGLGLMRLITNLLHSYDAAGNNLIVVVNADDRENAWI 73
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P A L T R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISMSPKARGLTVVNTDFTSVGSREKMYAHGGIFSITSRILVVDLLTNLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I+L+ + S E FI RI + N+ +++AFSD P GF+ +M+++
Sbjct: 134 ETITGMIVLHADRIVATSLEAFILRIYRQKNKVGFLKAFSDNPDPFTIGFSPLATMMRNM 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E ++ + E++K N
Sbjct: 194 FLRKASLWPRFHVQVAQSLEGKKKAEVIELEVPMTDSMREIQTAIMECVELSIHELKKEN 253
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+++ED +++ L ++FD ++RRQL+P WH + KTKQ+ DL LR +L ++ DAV
Sbjct: 254 TGLEMEDWNLDSALTRNFDLMVRRQLEPNWHRVSWKTKQIAGDLTVLRGMLQSILALDAV 313
Query: 292 TYLKYLDTLRVSE--------SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++L+ LDT+ + S W+F++++ IF+ A++RVY
Sbjct: 314 SFLQQLDTIHAAHKPAPGTTRQTESPWLFSDAAQTIFETARQRVY--------------- 358
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
++E + G S+ + L+ VLEE PKW VL +VLEEI + + +
Sbjct: 359 -------------SSEQKAGPNSTIES---LKPVLEEQPKWAVLADVLEEIGRDLYFEPA 402
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
R ++ +G +L+ C D +C QL D ++
Sbjct: 403 VR--------DDSNGTILIMCADTDTCRQLRDYLQT 430
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 58/85 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ +L+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 593 IHAYEGDQDEHVLEEVKPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 652
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LI++++ M I
Sbjct: 653 RYLSSVRREKDAFTKLIKERASMSI 677
>gi|226287645|gb|EEH43158.1| DNA repair protein rad16 [Paracoccidioides brasiliensis Pb18]
Length = 951
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 240/461 (52%), Gaps = 68/461 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + +EL E LVIL+ GL L +++ ++L + + L+++ + +++ I
Sbjct: 14 LQYQQDLFSELRSEDE--LVILARGLGLLRIVTNLLHSYDATGNNLVIVVGADRRENEWI 71
Query: 63 ------HYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
HY PL L T R T+Y+ G I + L
Sbjct: 72 GEALAEHYAVSRTPLVRGLKVINTDQATVPMRQTMYTQGGIL-------------KLLDP 118
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ GLI+L+ + S E FI RI + N+ +++AFSD P GF +M++L
Sbjct: 119 ESITGLIVLHAEKIVATSQEAFIIRIYRQFNKVGFLKAFSDSPEPFTIGFNPLANMMRNL 178
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK LWPRFQV V+E LE R+ V+++ VPM+ M IQ A+LE ++A ++E++K N
Sbjct: 179 FLRKTSLWPRFQVTVAESLEGRKKAEVIELEVPMTDKMRDIQNAVLECVEANIRELKKAN 238
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+D+ED TV++ L ++FD +RRQLDP+WH + +TKQ+ SDL LR +L L+ YD+V
Sbjct: 239 SGLDIEDWTVDSALHQNFDVAIRRQLDPVWHRVSFRTKQIASDLTVLRSMLLSLLTYDSV 298
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
++ KYLD + + S S W+F ++++ IF AK RVYR
Sbjct: 299 SFNKYLDVIIAAHSPPPGSNKQNFSPWLFLDAAHVIFKTAKSRVYR-------------- 344
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
GK +++ + ++S LE VLEE PKW VL +VL+EIE S
Sbjct: 345 ---GKNDPCEQL---------SDTSSLPPSLEPVLEEQPKWSVLADVLDEIER------S 386
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
+ + G+ N G +L+ C D +C Q+ + + KV
Sbjct: 387 TYLNPVPPGDSN--GTILIMCSDGKTCRQIREYLETMRIKV 425
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 57/84 (67%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y + D +L+ +KP I++Y PD +F+R++EVY++ + + +++V+FL+Y S E Q++
Sbjct: 579 YDGDMDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVFFLYYSGSVEEQRYL 638
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
+ +RRE AF LI++K M + I
Sbjct: 639 SAVRREKDAFTKLIKEKGSMALTI 662
>gi|295662641|ref|XP_002791874.1| DNA repair protein rad16 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279526|gb|EEH35092.1| DNA repair protein rad16 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 951
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 243/463 (52%), Gaps = 72/463 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + +EL E LVIL+ GL L +++ ++L + + L+++ + +++ I
Sbjct: 14 LQYQQDLFSELRSE--DELVILARGLGLLRIVTNLLHSYDATGNNLVIVVGAERRENEWI 71
Query: 63 ------HYLAPNAPL-----LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
HY PL + + A +P R T+Y+ G I + L
Sbjct: 72 GEALAEHYAVSRTPLARGLRVINTDQATVPM--RQTMYTQGGIL-------------KLL 116
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
++ GLI+L+ + S E FI RI + N+ +++AFSD P GF +M+
Sbjct: 117 DPESITGLIVLHAEKIVATSQEAFIIRIYRQFNKVGFLKAFSDSPEPFTIGFNPLANMMR 176
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRFQV V+E LE R+ V+++ VPM+ M IQ A+LE ++A ++E++K
Sbjct: 177 NLFLRKPSLWPRFQVTVAESLEGRKKAEVIELEVPMTDKMRDIQNAVLECVEANIRELKK 236
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
N +D+ED TV++ L ++FD +RRQLDP+WH + +TKQ+ SDL LR +L L+ YD
Sbjct: 237 ANSGLDIEDWTVDSALHQNFDVAIRRQLDPVWHRVSFRTKQIASDLTVLRSILLSLLTYD 296
Query: 290 AVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
+V++ KYLD + + S S W+F ++++ IF AK RVYR
Sbjct: 297 SVSFNKYLDIIIAAHSPPPGSNKQNYSPWLFLDAAHVIFQTAKSRVYR------------ 344
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
GK +++ + ++S LE VLEE PKW VL +VL+EIE
Sbjct: 345 -----GKNDPCEQL---------SDTSSLPPSLEPVLEEQPKWSVLADVLDEIER----- 385
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
S+ + G+ N G +L+ C D +C Q+ + + KV
Sbjct: 386 -STYLNPVPPGDSN--GTILIMCSDGKTCRQIREYLETMRIKV 425
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y + D +L+ KP I++Y PD +F+R++EVY++ + + +++V+FL+Y S E Q++
Sbjct: 579 YDGDMDDHVLEEAKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVFFLYYSGSVEEQRYL 638
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
+ +RRE AF LI++K M + I
Sbjct: 639 SAVRREKDAFTKLIKEKGSMALTI 662
>gi|307186525|gb|EFN72085.1| DNA repair endonuclease XPF [Camponotus floridanus]
Length = 866
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 234/456 (51%), Gaps = 58/456 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I E++QE GLVI + GL + + +V+ + +++L ++ + +
Sbjct: 1 MLEYENQIFLEIIQE--DGLVITAKGLGIETVFVNVIKAYLDPGNLVIILGTTDHDEHYF 58
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + LP + A+ P+N R +Y G + F++ RIL+VDLL R+P + G++
Sbjct: 59 IELLKSYGTNTLPRVVNAECPSNEREIMYLEGGVLFISGRILVVDLLKNRVPLHLITGIL 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E F R+ + N+ +I+AF++ A G+++ ER+MK+LF++ L+L
Sbjct: 119 VYRAHNIRNAYQEAFALRLYRQNNKTGFIKAFTNSALAFTVGYSQVERVMKTLFVKNLYL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ L + P V+++ V ++ M IQ A+L+VM+ +KE++ NK +D+E+L
Sbjct: 179 WPRFHTVVNNCLSKHEPDVIELHVQITPKMQNIQTALLDVMNYIVKELKALNKYLDLEEL 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F + L QLDPIWH L TKQL SDLK LR L+ L D+V++ L+
Sbjct: 239 TVENAIAKKFHKQLHLQLDPIWHQLSTTTKQLFSDLKILRSLIISLTYEDSVSFYAMLNR 298
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
LR E S WI + +F YA+ RVY D
Sbjct: 299 LRTMEYAVKASGWIMLDEVDNLFKYARSRVY--------------------------TDK 332
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
NE + E PKW L EVL EI+E++ K+ ++ E+ D
Sbjct: 333 NELKP----------------EPNPKWIALSEVLSEIQEQKHKKKAN--------EKVDK 368
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
++LV D C QL++ + G+ K + E K L
Sbjct: 369 VLILV--HDNNICKQLKNYLTMGANKYLFYEALKKL 402
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y D+ VRQ+EVY+ NP + LKVYFL Y S E Q++ +RRE AF SLI
Sbjct: 509 PNNIILYVADIGTVRQLEVYQNNNPLLDLKVYFLIYGGSVEEQEYLTSLRREKEAFHSLI 568
Query: 703 RQKSFMMIPIDQ 714
K+ M++P DQ
Sbjct: 569 NTKTTMIVPEDQ 580
>gi|307215344|gb|EFN90056.1| DNA repair endonuclease XPF [Harpegnathos saltator]
Length = 868
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 231/456 (50%), Gaps = 59/456 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I E+LQE GLVI + GL + + A++L +S +++L ++ +
Sbjct: 1 MLEYENQIFLEILQE--DGLVITAKGLGIETIFANILKAYSDPGNLVIVLGTTDYDERYF 58
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + +LP + A+ P+N R +Y G + F++ RIL+VDLL R+P + G++
Sbjct: 59 IELLKSYGTNILPRIVNAECPSNEREIMYLEGGVLFISGRILVVDLLKNRVPLHLVTGIL 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E F R+ + N+ +I+AF++ A G+++ ER+MK LF++KL+L
Sbjct: 119 VYRAHNIRNAYQEAFALRLYRQNNKTGFIKAFTNSSLAFTVGYSQVERVMKVLFVKKLYL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ L + P V+++ + M IQ A+L++M+ +KE+++ NK +++++L
Sbjct: 179 WPRFHSTVNNCLSKHEPDVIELHAKFTPKMQNIQTALLDIMNYIIKELKRLNKYLELDEL 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F + L QLDPIWH L TKQL SDLKTLR L+ L D+V++ L+
Sbjct: 239 TVENAIAKKFHKQLHLQLDPIWHQLSSSTKQLFSDLKTLRSLIICLTYEDSVSFYLMLNR 298
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
LR + S WI + + +F YAK RVY ++ +LK
Sbjct: 299 LRTMDYAVKASGWIMLDEAENLFKYAKSRVY------------------TERDELKP--- 337
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E PKWK L E L EI+ + K+ E
Sbjct: 338 ---------------------EPNPKWKALSEALFEIQIQHKKRKDGNVEK--------- 367
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
VL+ D C QL++ + G+ + + E K L
Sbjct: 368 --VLILVHDNSICYQLKNYLTMGANEYLLYEALKKL 401
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P +++Y D+ VRQ+EVY+ NPS+ LKVYFL Y S E Q++ +RRE AF SLI
Sbjct: 509 PNNVILYVADIGIVRQLEVYQNNNPSLNLKVYFLIYGGSVEEQEYLTSLRREKEAFNSLI 568
Query: 703 RQKSFMMIPIDQ 714
K+ M++P DQ
Sbjct: 569 NTKTTMVVPEDQ 580
>gi|328784167|ref|XP_001121259.2| PREDICTED: DNA repair endonuclease XPF-like [Apis mellifera]
Length = 831
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 248/476 (52%), Gaps = 66/476 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I E+L E GLVI++ GL + + A++L + G L+++ + N Q
Sbjct: 1 MLEYENQIFLEILHE--DGLVIIAKGLGIETIFANILRAYI-DPGNLIIVLGTTNHDEQY 57
Query: 62 IHYLAPNAPL--LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L N L LP +T++ ++ R +Y G + F++ IL+VDLL +R+P + G+
Sbjct: 58 FIDLLKNYGLKQLPRVVTSECSSDEREVMYLEGGVLFMSGPILVVDLLKKRIPLHLVTGI 117
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++ H + + E F R+ + N+ +I+AF++ A GF + ER+MK+LF++KL+
Sbjct: 118 LVYRAHNILNSYQEAFALRLYRQNNKTGFIKAFTNSALAFTVGFMQVERVMKALFVKKLY 177
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
LWPRF ++ LE+ P V+++ V ++ M IQ ++ ++M+ +KE+++ NK +D++D
Sbjct: 178 LWPRFHTLINNSLEKHKPDVIELHVKITPKMLNIQISLFDIMNYIVKELKRLNKYLDLDD 237
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L VEN + K F + L+ QLDPIWH L +KQL+SDLKTL LL L D+V++ L+
Sbjct: 238 LNVENAITKKFHKQLQLQLDPIWHQLSSTSKQLLSDLKTLHALLASLTYEDSVSFYSMLN 297
Query: 299 TLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR E S W+ +S +F AK+RVY +K +LK
Sbjct: 298 RLRTMEYAIKNSGWLMLDSVDALFKNAKERVY------------------NEKNELKP-- 337
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
E PKW L EVL EI+ + K+ +S +
Sbjct: 338 ----------------------ESTPKWIALTEVLLEIQNDYKKKNNSEK---------- 365
Query: 417 HGIVLVACKDECSCMQLEDCIRNGS-EKVMREEWEKYLLSKVQLRSVQTSSKKKKS 471
+L+ D C QL + + G+ E ++ E +K LS +++++ +S +K+S
Sbjct: 366 ---ILILVHDRNICYQLRNYLTMGANEYLLYEAMKK--LSHKEMQNISETSVEKES 416
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y D+S +RQIEVY+ NPSI LKVYFL Y S E Q++ +RRE AF +LI
Sbjct: 473 PSNIIMYVADLSAIRQIEVYQNNNPSIDLKVYFLIYGGSVEEQEYLTSLRREKEAFHALI 532
Query: 703 RQKSFMMIPIDQ 714
K+ M+IP DQ
Sbjct: 533 NSKTTMVIPEDQ 544
>gi|380484259|emb|CCF40111.1| DNA repair protein [Colletotrichum higginsianum]
Length = 828
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 203/361 (56%), Gaps = 48/361 (13%)
Query: 88 LYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA 147
+Y+ G IF VT RIL+VDLLT L T + GLI+L+ + S E FI RI + N+
Sbjct: 1 MYTRGGIFSVTSRILVVDLLTNLLDTEKVTGLIVLHADRVVATSLEAFILRIYRQKNKAG 60
Query: 148 YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPM 206
+++AF+D P +GF+ +M++LF+RK LWPRF V V++ LE ++ V+++ + M
Sbjct: 61 FLKAFADNPDPFSTGFSPLTTMMRNLFLRKASLWPRFHVTVAQSLEGKKTAEVIELNISM 120
Query: 207 SKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILG 265
S+ M IQ AILE ++ + E++K N +++ED +++ L K+FD I+RRQLDP WH +
Sbjct: 121 SQAMRDIQNAILECVEVSIHELKKGNTGLEMEDWNLDSALHKNFDVIIRRQLDPNWHRVS 180
Query: 266 KKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAESSY 317
KT+Q+V+DL LR +L ++ DAV++L++LDT+ + S +S W+F +++
Sbjct: 181 WKTRQIVNDLSVLRGMLQSVLTLDAVSFLQHLDTIHAAHSPPPGSTRQNQSPWLFLDAAQ 240
Query: 318 KIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEV 377
IF+ A++RVY + SK+ T D N D L V
Sbjct: 241 TIFETARRRVY----------SASSKAATA--------DANIDS------------LRPV 270
Query: 378 LEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI 437
LEE PKW L +VL EI+ R++ +G +L+ C D +C QL D +
Sbjct: 271 LEEQPKWAWLADVLTEIDNSMHFDPPVRDD--------SNGTILIMCGDTNTCRQLRDYL 322
Query: 438 R 438
+
Sbjct: 323 Q 323
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 7/122 (5%)
Query: 594 MLETAFVEKEVQWKRSLKTDTAESKDS-------KPVPPVHFYALESDQPILDILKPFVI 646
M E E+E + K + TD E+ + + + +H Y + D+ +L+ +KP I
Sbjct: 436 MAEVQITEEEAEQKPEIITDPLENMEDYYQLYEMQDLVAIHAYDGDQDEHVLEEVKPRYI 495
Query: 647 VVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
V+Y PD +F+R++EVY++ + ++VYF++Y +S E Q++ + +RRE AF LI++++
Sbjct: 496 VMYEPDAAFIRRVEVYRSSHNDRNVRVYFMYYGESVEEQRYLSSVRREKDAFTKLIKERA 555
Query: 707 FM 708
M
Sbjct: 556 SM 557
>gi|384484588|gb|EIE76768.1| hypothetical protein RO3G_01472 [Rhizopus delemar RA 99-880]
Length = 855
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 233/446 (52%), Gaps = 85/446 (19%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF + I+ E++ E GL+I+S GL L ++I +++ L++ +L+++ S + +
Sbjct: 1 MLEFQKQILTEIVSE--DGLLIMSPGLGLFEVICNLMQLYTGGNHLVLVINMSQEQEVLV 58
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+L +P E HTL + G++I
Sbjct: 59 QRHLVEKG--VPYE----------HTL-------------------------KPIDGILI 81
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
LN H + +S I RI + N E +I+AFSD+P + VSGFA + MK+LF+RK+HLW
Sbjct: 82 LNAHTVKPDSMIQLILRIYREENEEGFIKAFSDRPESFVSGFAPLQNTMKALFLRKVHLW 141
Query: 182 PRFQVNVSEELERE-PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
PRFQ+ VSE L V+++R PM++ M IQ++++E M+A L E+R+ N ++DV +
Sbjct: 142 PRFQLVVSENLTTAMNGDVIELRQPMTESMDLIQQSLVECMEATLSELRRMNPQLDVGEF 201
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
E+ FKSFD I+RRQLDP+WH L +KQLV DLKTLR+LL YL YD VT+ +++T
Sbjct: 202 --EHAFFKSFDVIVRRQLDPVWHRLSPTSKQLVDDLKTLRQLLGYLTAYDCVTFYSFMET 259
Query: 300 LRVS-------ESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL 352
+ + ++ S W+F ++ + A+KRVY L
Sbjct: 260 IIAANAPGDARQTRHSQWLFLDAGNRAVSEARKRVY-----------------------L 296
Query: 353 KKVDNNEDE-DGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
KK D D D + S ++ VLEE PKW++L +LEEIE E V L+
Sbjct: 297 KKGDPEYDAIDATITDPSLPSHIKLVLEEQPKWQLLNSILEEIE---------HESVGLN 347
Query: 412 GEENDHGIVLVACKDECSCMQLEDCI 437
G E +L+ + SC L+D I
Sbjct: 348 GGEG--AAILIMVSERRSCHHLQDYI 371
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 61/87 (70%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ Y + + IL+ +P I++Y P +FVRQ+EVY+A++P+++++VYF+ YE+S E Q
Sbjct: 504 IQCYEDDLHEQILEDTQPRFIIMYDPSPAFVRQVEVYRAKHPTVQIRVYFMLYENSVEEQ 563
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
+ + I++E +FE LI +KS M IP+
Sbjct: 564 NYLSLIKKEKESFEKLIHEKSVMAIPL 590
>gi|392596648|gb|EIW85970.1| hypothetical protein CONPUDRAFT_140757 [Coniophora puteana
RWD-64-598 SS2]
Length = 999
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 236/422 (55%), Gaps = 22/422 (5%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L F I+ E+ L++L+ GL L +++ +++ ++ + +LL+++SP +S I
Sbjct: 4 LLPFQASILKEIHDPATSELIVLARGLGLRRILCTLMKIYDSPRSLVLLVNASPEEESAI 63
Query: 62 IHYLAPNAPLLPSE--ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P + ++ R LY G + VT RIL+VD+L +PT + G+
Sbjct: 64 GELLGIMGCRNPGLRIVGYEMGKRDRQDLYRKGGLISVTSRILVVDMLQSDIPTELITGI 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++++ +T S E FI R+ + N +++AFSD+P + SG + IMK + +RK+H
Sbjct: 124 VMVHGEKVTNLSLEAFIVRLYREKNTSGFLKAFSDQPEHITSGMSPLRSIMKEMQLRKVH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
++PR+ + E L++ P ++++ +++ M I AI++ M L E+++++ +D++D
Sbjct: 184 IYPRYHEEIKENLDQRRPDLIELATDLTEPMKDIHSAIVQCMITTLAELKRSHSTLDLDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ ++N F+ FD I+RRQLDP+WH +G KTKQLV DL TLR+LL YLV YDA+ + YL+
Sbjct: 244 VNIDNAHFRWFDAIVRRQLDPVWHKVGPKTKQLVGDLATLRRLLSYLVTYDALAFHAYLE 303
Query: 299 TLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
TL +S + +S W+ +++ IF AK+R Y T + + V +
Sbjct: 304 TLVLSNTTNASGNARQNQSPWMLTDAANIIFKTAKRRCYVLTSKHTLASQPEVIDVDDED 363
Query: 350 --RKLKKVDNNEDEDGGTSSTSTKVV--------LEEVLEEAPKWKVLREVLEEIEEERL 399
L + + + G T+ T+ ++ VLEE PKW VL ++L+EIEEE +
Sbjct: 364 AWAALDEAEGFTPQIGTTNGRGTEPKRPRWLPDGIDPVLEELPKWTVLADILQEIEEEII 423
Query: 400 KQ 401
+Q
Sbjct: 424 RQ 425
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V YA + D+ +L L+P ++Y P F+RQIEVY+ NP + ++ Y + Y +STE Q
Sbjct: 619 VRTYADDGDEQVLAELQPRFFIMYEPSTDFLRQIEVYRNSNPGLGVRAYIMTYHNSTEEQ 678
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
K+ RRE AFE LIR++ M++PI
Sbjct: 679 KYLTAQRREKEAFERLIRERGSMLLPI 705
>gi|242212918|ref|XP_002472290.1| predicted protein [Postia placenta Mad-698-R]
gi|220728657|gb|EED82547.1| predicted protein [Postia placenta Mad-698-R]
Length = 950
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 197/351 (56%), Gaps = 40/351 (11%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R LY G + +T +I VD+L+ + T + G+I+L+ +T S E FI R+ + N
Sbjct: 89 RQDLYKQGGLLSITSQIFTVDMLSGDVDTEKITGIIMLHAEKVTPTSPEAFIVRLFREKN 148
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRV 204
+++AFSD+P + SG + I+K L IR +H++PRF +V E L+ + P +V++
Sbjct: 149 LTGFLKAFSDQPEYITSGMSPLRTILKELQIRTVHIYPRFHADVKESLDLKRPDLVELHQ 208
Query: 205 PMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHI 263
MS+ M I AI++ M L E+++ N +D++DL ++N F+SFD I+RR LDP+WH
Sbjct: 209 AMSESMSEIHHAIVQCMSTTLSELKRANASLDLDDLNIDNAYFRSFDMIVRRILDPVWHK 268
Query: 264 LGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES---------FRSVWIFAE 314
+G +TKQLVSDL TLR+LL+YL+ YDA+++ YL+TL S + +S W+ +
Sbjct: 269 VGPRTKQLVSDLATLRRLLNYLLTYDALSFHAYLETLVASNTTAESGAARQHQSPWMLTD 328
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN------EDEDGGTSST 368
+++ IF YAK+R Y ++ +K V D+ +D DG TS+T
Sbjct: 329 AAHVIFAYAKRRCY--------TMSAAAKKVPAPPLVDNPFDDEDAWAVLDDLDGRTSNT 380
Query: 369 STKVV----------------LEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
++ VLEE PKW +L +VL+EIE E ++ S
Sbjct: 381 RNNQAGTVANEPRRPKWLPDGMDPVLEELPKWSLLADVLQEIEVEMIRLQS 431
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y+ +SD +L ++P IV++ P++ F+R+IEVY+ NP + ++VYF+ Y+ S E
Sbjct: 585 VRAYSDDSDDRMLQEMQPRFIVMFEPNLEFIRRIEVYRNSNPGLGVRVYFMMYKLSCEEG 644
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
K+ G+RRE AFE LI+++ M++PI
Sbjct: 645 KYLTGLRREKEAFERLIKERGSMLMPI 671
>gi|350414747|ref|XP_003490405.1| PREDICTED: DNA repair endonuclease XPF-like isoform 1 [Bombus
impatiens]
Length = 865
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 262/523 (50%), Gaps = 77/523 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I E+L E GLVI + GL L + A++L + +++L ++ + +
Sbjct: 1 MLEYENQIFLEILHE--DGLVITAKGLGLETVFANILRAYIDPGNLVIVLGTTNHDEQYF 58
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I +L LP ++++ ++ R LY G + F++ RILIVD + +R+P + + G++
Sbjct: 59 IDFLKSQGLNQLPRIVSSEYTSDEREGLYLEGGVLFMSGRILIVDFIKKRVPLNLITGIL 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + + E F R+ + N+ +I+AF++ A GF + ER+MK+LF++KL L
Sbjct: 119 VYRAHNILNSYQEAFALRLYRQHNKTGFIKAFTNSALAFTVGFMQVERVMKALFVKKLFL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ LE+ P V+++ + ++ M IQ ++L++M+ +KE+++ NK +D++DL
Sbjct: 179 WPRFHTLVNNSLEKNKPDVIELHIKITPKMLNIQTSLLDIMNYIIKELKRLNKYLDLDDL 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F + L+ QLDP+WH L +KQL+SDLK LR LL D V++ L+
Sbjct: 239 TVENAIAKKFHKQLQSQLDPMWHQLSSTSKQLLSDLKMLRDLLACSTYEDCVSFYAMLNR 298
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
LR E S W+ ++S +F AK R+Y +K ++K
Sbjct: 299 LRTMEYAVKNSGWLMSDSVDALFKNAKDRIY------------------NEKNEIKP--- 337
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E PKW L EVL EIE + K +++
Sbjct: 338 ---------------------EATPKWTALTEVLLEIENDNKKNKTNKNPE--------- 367
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGY 477
VL+ D C QL + + G+ K + E K L K ++ ++++K +
Sbjct: 368 -KVLILVHDRNICYQLRNYLTMGANKYLLYEAVKKLSHKEITKTTGKNAEEKSTS----- 421
Query: 478 GILDGVAPVKIAQNAEASSVSKQEHDA-LLAAASKIRNQGKSD 519
A+N E S +++E DA +L + K++ + +SD
Sbjct: 422 -----------AENNEHS--TEEEQDAYVLTLSQKVKEENQSD 451
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y DMS VRQIEVY+ NPSI LKVYFL YE S E Q++ +RRE AF LI
Sbjct: 507 PNNIIMYVADMSAVRQIEVYQNNNPSIDLKVYFLIYESSVEEQEYLTSLRREKEAFHLLI 566
Query: 703 RQKSFMMIPIDQ 714
K+ M+IP DQ
Sbjct: 567 NAKTTMVIPEDQ 578
>gi|383860837|ref|XP_003705895.1| PREDICTED: DNA repair endonuclease XPF-like [Megachile rotundata]
Length = 865
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 199/331 (60%), Gaps = 6/331 (1%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + E++ E GLV+++ GL L + A++L ++ +++L ++ + +
Sbjct: 1 MLEYENQMFLEIIHE--DGLVVVAKGLGLETVFANILRAYTDPGNLIIVLGTTGHDEQYF 58
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L LP +T + A+ R +Y G + F++ RIL+VDLL R+P + G++
Sbjct: 59 IDILKGLGIKHLPRVVTCECTADERELMYLEGGVLFLSGRILVVDLLKNRVPLKLVTGVL 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + + E F R+ + N+ +I+AFS+ A+ GF++ ERIMK+LF++KLHL
Sbjct: 119 VYRAHNILNSYQEAFALRLYRQSNKTGFIKAFSNSALALTVGFSQVERIMKALFVKKLHL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ L + P V+++ V ++ M IQ ++L++M+ +KE++K NK +D+++L
Sbjct: 179 WPRFHALVNNSLGKHKPDVIELHVKITSKMLNIQTSLLDIMNYVIKELKKLNKYLDLDEL 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K + + L+ QLDP+WH L TKQL+SDLKTLR LL L D+V++ L+
Sbjct: 239 TVENAISKKYHKQLQLQLDPLWHQLSATTKQLLSDLKTLRGLLACLTYEDSVSFYSMLNC 298
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVY 328
LR + S W+ +S +F AK+RVY
Sbjct: 299 LRTMDYAVKNSGWLMLDSVDILFQNAKERVY 329
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y D+S VRQIEVY+ NPSI LKVYFL Y S E Q++ +RRE AF LI
Sbjct: 507 PNNIIMYVADISAVRQIEVYQNNNPSIDLKVYFLIYGGSVEEQEYLTSLRREKEAFHLLI 566
Query: 703 RQKSFMMIPIDQ 714
K+ M+IP DQ
Sbjct: 567 NAKTKMVIPDDQ 578
>gi|213405985|ref|XP_002173764.1| DNA repair protein rad16 [Schizosaccharomyces japonicus yFS275]
gi|212001811|gb|EEB07471.1| DNA repair protein rad16 [Schizosaccharomyces japonicus yFS275]
Length = 870
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 245/472 (51%), Gaps = 70/472 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L F + I E+ E GL +++ GLS +++A++L +S G+LL+L ++ + +I+
Sbjct: 9 LSFQKEIFEEVRNE--DGLCVVAPGLSSLRIVANILAYYS-VPGSLLILLNANDTDIEIL 65
Query: 63 H-YLAP-NAPLLPSEITAD---LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
YL P + + D R Y G IF VT RIL++D+LT +P +
Sbjct: 66 EKYLDELKKPWKVTNLMNDELFYLRLLREKAYKGGGIFAVTSRILVLDMLTHLIPVEFIT 125
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
GL++L+ +T +E F+ R+ + NR+ +I+AF+D+P + G ++ LF++
Sbjct: 126 GLVVLHADRITATGSEAFVLRLFRQGNRDGFIKAFTDEPERLTMGINALSGCLRCLFLKH 185
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK--VD 235
+ ++PRF V+V+E LE P VV+ V ++ +Q I+ +++ +KE+R+ N +D
Sbjct: 186 VSIFPRFHVHVAEALENSPAAVVEFNVEATESQKSMQTCIITCIESTIKELRRINSAHLD 245
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
+E TV++ L +SFD I+RRQLDP+WH L KTK LVSDL TLR LL L+ YD +++LK
Sbjct: 246 MEQWTVDSLLHRSFDIIIRRQLDPLWHRLSSKTKTLVSDLTTLRSLLTSLISYDCISFLK 305
Query: 296 YLDTLRVSESFR------SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
LDT+ +S R S W+ E + + + A++RVY
Sbjct: 306 LLDTVILSAGGRNPMQNQSPWLLLEPANTLINLARQRVY--------------------- 344
Query: 350 RKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVL 409
S TS V + VLE PKW +L+ +L+EI+++ K +R
Sbjct: 345 --------------SVSPTSPNVQV-PVLEALPKWDILKTILDEIKQDASKTDVTRM--- 386
Query: 410 LDGEENDHGI--VLVACKDECSCMQLEDCI------RNGSEKVMREEWEKYL 453
GI L+ C D+ +C Q++D + + S K+M+ + YL
Sbjct: 387 -------FGIASTLIMCADDRTCFQIKDYLLSSSFDEDASLKLMQRKLRDYL 431
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y + D +L+ L P I++Y D +F+R++EVY+A +P +LKVYF +Y + E Q++
Sbjct: 526 YDGDYDDILLEELSPNYIIMYDADPAFIRRVEVYRATHPERQLKVYFTYYGGTVEEQRYL 585
Query: 689 AGIRRENGAFESLIRQKSFMMI 710
+RRE +F LIR+++ M +
Sbjct: 586 FAVRREKDSFSRLIRERANMTV 607
>gi|255715345|ref|XP_002553954.1| KLTH0E11000p [Lachancea thermotolerans]
gi|238935336|emb|CAR23517.1| KLTH0E11000p [Lachancea thermotolerans CBS 6340]
Length = 1019
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 206/739 (27%), Positives = 337/739 (45%), Gaps = 117/739 (15%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPSQ-------GTLLLLSSS 54
L F Q I+ +LL + L+IL GL + ++A++L +L +P++ +LLL++S
Sbjct: 68 LPFQQMIVEDLLVSEDS-LLILGKGLGIEPIVANLLHVLATPTRINGQDKRSLVLLLNAS 126
Query: 55 PNLKSQIIHYLAPNA----------PLLPSEITADL-PANHRHTLYSSGQIFFVTPRILI 103
+I+ L A P S +TADL + R LY G I VT RILI
Sbjct: 127 EEDNEKILEELLELAWSGTEEDGQRPF--SVVTADLLTVDQRRRLYLHGGIVSVTSRILI 184
Query: 104 VDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGF 163
VDLL+ + + + GL+IL+ L S E+FI + +S+NR +I+A SD+P A ++ F
Sbjct: 185 VDLLSGIIHPNKITGLVILHVENLHNYSNESFIAEMYRSVNRWGFIKAVSDEPEAFMTEF 244
Query: 164 AKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMD 222
+ +R +K L +++ LWPRF V VS L R V++V+V ++ M IQ + E +
Sbjct: 245 SPLKRKLKDLRLKRTLLWPRFHVEVSSSLNVRNENKVIEVKVSLTNSMSQIQFGLFECLK 304
Query: 223 ACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKL 281
C+ E+ RK + +E +N L +F L L P WH + ++KQLV D+ TL+KL
Sbjct: 305 KCIDELNRKNPTLSLESWNADNCLHPNFFRSLYSVLTPNWHRISFESKQLVKDIGTLKKL 364
Query: 282 LDYLVRYDAVTYLKYLDTL------RVSESF-RSVWIFAESSYKIFDYAKKRVYRFTRSD 334
L LV YDAV + + + + VS + S W+ AE S + YAKKRV+ SD
Sbjct: 365 LHALVSYDAVDFYEIIQVILDANKPSVSRKYSESPWLMAEESQAVLSYAKKRVF----SD 420
Query: 335 GVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEI 394
G N E LEE PKW+ L +L++I
Sbjct: 421 G---------------------NYE------------------LEELPKWEQLTSILDDI 441
Query: 395 EEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI-----RNGSEKVMREEW 449
E+ K SS G L+ C ++ +C QL I + G+ + M +
Sbjct: 442 AVEQAKLGSSL------------GPTLIMCSEDRTCRQLRKIIGYSNRKEGARRFMLNKL 489
Query: 450 EKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAA 509
Y+ + L+ +++ KE + A+ AS + A +AA
Sbjct: 490 RAYMNRRDLLKKTAEDIQEESRKEGTSAEL---SVSRSFAKEEVASKRRRTRGAASVAAV 546
Query: 510 SKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKP 569
++++ + S+ G++ E+ + Q ++ + + I D+
Sbjct: 547 TRLK-RATSNGGEDIESVMSVDD----------------IEQHISQIIEDTDEGLIGDQ- 588
Query: 570 EISGSGNEGPADE--IHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVH 627
EI D + + LE ++ E W + + E D +
Sbjct: 589 EIDNLAQNFDEDNELLLTEETNIDTSELE-PMIKNENTW--AYGQNNFEYIDRGDQIVIE 645
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
+ ++ +L L P I++Y PD++F+R++E++KA + LKVYF++Y DS E Q
Sbjct: 646 KFYNRANDVLLQELLPSHIIMYEPDLAFIRRVEMFKALHKDWPLKVYFMYYGDSFEEQSH 705
Query: 688 KAGIRRENGAFESLIRQKS 706
I++E AF LIR+ S
Sbjct: 706 LIAIKKEKDAFTRLIREHS 724
>gi|340715119|ref|XP_003396067.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF-like
[Bombus terrestris]
Length = 865
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 264/523 (50%), Gaps = 77/523 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I E+L E GLVI + GL L + A++L + +++L ++ + +
Sbjct: 1 MLEYENQIFLEILHE--DGLVITAKGLGLETVFANILRAYIDPGNLVIVLGTTNHDEQYF 58
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I +L LP ++++ ++ R LY G + F++ RILIVD + +R+P + + G++
Sbjct: 59 IDFLKSQGLNQLPRIVSSEYTSDEREGLYLEGGVLFMSGRILIVDFIKKRVPLNLITGIL 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + + E F R+ + N+ +I+AF++ A GF + ER+MK+LF++KL L
Sbjct: 119 VYRAHNILNSYQEAFALRLYRQHNKTGFIKAFTNSALAFTVGFMQVERVMKALFVKKLFL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ LE+ P V+++ + ++ M IQ ++L++M+ +KE+++ NK +D++DL
Sbjct: 179 WPRFHTLVNNSLEKNKPDVIELHIKITPKMLNIQTSLLDIMNYIIKELKRLNKYLDLDDL 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F + L+ QLDP+WH L +KQL+SDLK LR LL D V++ L+
Sbjct: 239 TVENAIAKKFHKQLQSQLDPMWHQLSSTSKQLLSDLKMLRDLLACSTYEDCVSFYAMLNR 298
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
LR E +S W+ +S +F AK R+Y ++ +E+
Sbjct: 299 LRTMEYAVKKSGWLMLDSVDALFKNAKDRIY----NEKIEIKP----------------- 337
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E PKW L EVL EIE + K +++ E+
Sbjct: 338 ---------------------EATPKWTALTEVLLEIENDNKKNKNNKN-----AEK--- 368
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGY 477
VL+ D C QL + + G+ K + E K L K ++ + + ++K +
Sbjct: 369 --VLILVHDRNICYQLRNYLTMGANKYLLYEAIKKLSYKEIAKTTEKNVEEKSTS----- 421
Query: 478 GILDGVAPVKIAQNAEASSVSKQEHDA-LLAAASKIRNQGKSD 519
A+N E S +++E DA +L + K+R + +SD
Sbjct: 422 -----------AENNEHS--TEEEQDAYVLTLSQKVREENQSD 451
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y DMS VRQIEVY+ NPSI LKVYFL YE S E Q++ +RRE AF LI
Sbjct: 507 PTNIIMYVADMSAVRQIEVYQNNNPSIDLKVYFLIYESSVEEQEYLTSLRREKEAFHLLI 566
Query: 703 RQKSFMMIPIDQ 714
K+ M+IP DQ
Sbjct: 567 NAKTTMVIPEDQ 578
>gi|3219304|dbj|BAA28847.1| MUS38 [Neurospora crassa]
Length = 892
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 201/365 (55%), Gaps = 49/365 (13%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y+ G IF +T RIL+VDLLT L + G+++L+ + S E FI RI + N
Sbjct: 36 REKMYAQGGIFSITSRILVVDLLTNLLNPETITGMLVLHADRIVATSLEAFIFRIYRQKN 95
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P GF+ +M+++F+RK LWPRF V V++ LE ++ V+++
Sbjct: 96 KVGFLKAFSDNPDPFTVGFSPLATMMRNMFLRKASLWPRFHVQVAQSLEGKKKAEVIELE 155
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPM+ M IQ AI+E ++ + E++K N +++ED +++ L ++FD ++RRQL+P WH
Sbjct: 156 VPMTDSMREIQTAIMECVEISIHELKKENTGLEMEDWNLDSALTRNFDRMVRRQLEPNWH 215
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE--------SFRSVWIFAE 314
+ KTKQ+ DL LR +L L+ DAV++L+ LDT+ + S W+F++
Sbjct: 216 RVSWKTKQIAGDLTVLRGMLQSLLALDAVSFLQQLDTIHAAHKPAPGTTRQTESPWLFSD 275
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
++ IF+ A++RVY SK G ST L
Sbjct: 276 AAQTIFETARQRVY------------SSKQKAG-------------------PNSTIESL 304
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
+ VLEE PKW VL +VLEEI+ + + + R ++ +G +LV C D +C QL
Sbjct: 305 KPVLEEQPKWAVLADVLEEIDRDLYFEPAVR--------DDSNGTILVMCADTDTCRQLR 356
Query: 435 DCIRN 439
D ++
Sbjct: 357 DYLQT 361
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 58/85 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+H Y + D+ +L+ +KP I++Y PD SF+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 521 IHAYEGDQDEHVLEEVKPKYIIMYEPDASFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 580
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + +RRE AF LIR+++ M I
Sbjct: 581 RYLSSVRREKDAFTKLIRERASMSI 605
>gi|350414750|ref|XP_003490406.1| PREDICTED: DNA repair endonuclease XPF-like isoform 2 [Bombus
impatiens]
Length = 836
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 240/476 (50%), Gaps = 58/476 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I E+L E GLVI + GL L + A++L + +++L ++ + +
Sbjct: 1 MLEYENQIFLEILHE--DGLVITAKGLGLETVFANILRAYIDPGNLVIVLGTTNHDEQYF 58
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I +L LP ++++ ++ R LY G + F++ RILIVD + +R+P + + G++
Sbjct: 59 IDFLKSQGLNQLPRIVSSEYTSDEREGLYLEGGVLFMSGRILIVDFIKKRVPLNLITGIL 118
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + + E F R+ + N+ +I+AF++ A GF + ER+MK+LF++KL L
Sbjct: 119 VYRAHNILNSYQEAFALRLYRQHNKTGFIKAFTNSALAFTVGFMQVERVMKALFVKKLFL 178
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ LE+ P V+++ + ++ M IQ ++L++M+ +KE+++ NK +D++DL
Sbjct: 179 WPRFHTLVNNSLEKNKPDVIELHIKITPKMLNIQTSLLDIMNYIIKELKRLNKYLDLDDL 238
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F + L+ QLDP+WH L +KQL+SDLK LR LL D V++ L+
Sbjct: 239 TVENAIAKKFHKQLQSQLDPMWHQLSSTSKQLLSDLKMLRDLLACSTYEDCVSFYAMLNR 298
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
LR E S W+ ++S +F AK R+Y +K ++K
Sbjct: 299 LRTMEYAVKNSGWLMSDSVDALFKNAKDRIY------------------NEKNEIKP--- 337
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E PKW L EVL EIE + K +++
Sbjct: 338 ---------------------EATPKWTALTEVLLEIENDNKKNKTNKNPE--------- 367
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKE 473
VL+ D C QL + + G+ K + E K L K ++ + +K S E
Sbjct: 368 -KVLILVHDRNICYQLRNYLTMGANKYLLYEAVKKLSHKEITKTTYNAEEKSTSAE 422
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P I++Y DMS VRQIEVY+ NPSI LKVYFL YE S E Q++ +RRE AF LI
Sbjct: 478 PNNIIMYVADMSAVRQIEVYQNNNPSIDLKVYFLIYESSVEEQEYLTSLRREKEAFHLLI 537
Query: 703 RQKSFMMIPIDQ 714
K+ M+IP DQ
Sbjct: 538 NAKTTMVIPEDQ 549
>gi|332023478|gb|EGI63721.1| DNA repair endonuclease XPF [Acromyrmex echinatior]
Length = 915
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 212/405 (52%), Gaps = 48/405 (11%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++LE+ I +++QE GLVI + GL + + A+V+ + +++L ++ +
Sbjct: 120 LMLEYENQIFLDIVQE--DGLVITAKGLGIETIFANVIKAYLDPGNLVIVLGTTDYDERY 177
Query: 61 IIHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
I L + LP + A+ +N R +Y G + F++ RIL+VDLL R+P + G+
Sbjct: 178 FIDLLKSYGTSRLPLVVNAECSSNEREIMYLEGGVLFISGRILVVDLLKNRVPLHLVTGI 237
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++ H + E F R+ + N+ +I+AF+ A GF+K ERIMK+LF++KL+
Sbjct: 238 LVYRAHNILNAYQEAFALRLYRQNNKTGFIKAFTSSSLAFTVGFSKVERIMKALFVKKLY 297
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
LWPRF ++ L + P V+++ V ++ M IQ +L+VM+ +KE+++ NK +D+++
Sbjct: 298 LWPRFHATINNCLSKHEPDVIELHVHITPKMQSIQSTLLDVMNYVVKELKRLNKYLDLDE 357
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVEN + K F + L Q+DPIWH L TKQL SDLKTLR L+ L D+V++ L+
Sbjct: 358 LTVENAVAKKFHKQLHLQIDPIWHQLSTTTKQLFSDLKTLRSLIISLTYEDSVSFYAMLN 417
Query: 299 TLRVSESFRSV--WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
LR E WI +F YA+ RVY +K +LK
Sbjct: 418 RLRTMEYAMKAGGWIMLNEFENLFKYARSRVYT------------------EKNELKP-- 457
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
E PKW+ L EVL EI+E++ K+
Sbjct: 458 ----------------------EPNPKWEALSEVLFEIQEQKHKK 480
>gi|398398531|ref|XP_003852723.1| hypothetical protein MYCGRDRAFT_41772 [Zymoseptoria tritici IPO323]
gi|339472604|gb|EGP87699.1| hypothetical protein MYCGRDRAFT_41772 [Zymoseptoria tritici IPO323]
Length = 941
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 257/486 (52%), Gaps = 72/486 (14%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LEF Q + EL E L+IL+ GL L +L+ ++L + + L++L + + ++ I
Sbjct: 20 LEFQQEVFHELRDE--DILLILARGLGLLRLVTNLLHSYDAAGHNLVILIGAEDRENDWI 77
Query: 63 -HYLAPNAPLLPSE-------ITADLP-ANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S + DL R +Y G I VT RILIVD L+ L
Sbjct: 78 GESLAEHAAVSGSPKCRGMQLVNTDLTNVGTREKMYKRGGICSVTSRILIVDFLSGLLDP 137
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ + G+++L+ + S E FI RI + N++ +++AFSD+P SGF I+++L
Sbjct: 138 AMVTGVVVLHADRMAATSLEAFIVRIYRQKNKKGFLKAFSDQPEPFTSGFQPLSNILRNL 197
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F+RK L+PRF V++ LE R V+++ VPM++ M IQ A++E ++ + E++K N
Sbjct: 198 FLRKPVLYPRFHATVAKSLEGRRKAEVIELEVPMTEAMRDIQNAVMECVEVSIAELKKAN 257
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
++++D +++ L +SFD I+RRQLDP+WH +T+Q+V DL LR++L L+ +AV
Sbjct: 258 PGLEMDDWNLDSALHRSFDSIVRRQLDPVWHRTSFRTRQIVRDLGILRQILHSLLVLNAV 317
Query: 292 TYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
+ KYLDT+ + + +S W+F ++++ +FD AK+RVY
Sbjct: 318 DFHKYLDTVLAASAPPQGSNRNNQSPWLFLDAAHTLFDSAKRRVY--------------- 362
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQAS 403
TGK + G ++T T L VLEE PKW +L E+LEEIE +
Sbjct: 363 --TGKISE------------GLATTETDG-LNPVLEEMPKWALLAEILEEIERDVYFHPQ 407
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR-------------NGSEKVMREEWE 450
+++E G +L+ C D+ +C QL + ++ N +E R+
Sbjct: 408 TQDE--------SSGSILIMCGDQGTCRQLREYLQTAYKESDEQRLSSNENEPFERKPSA 459
Query: 451 KYLLSK 456
KY+L +
Sbjct: 460 KYMLRR 465
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 63/98 (64%)
Query: 613 DTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK 672
D E D K + VH Y + D +L+ +KP +++Y PD +F+R+IE+Y++ + + +++
Sbjct: 575 DYYELYDMKDLVLVHPYDGDKDDHLLEEVKPRYVIMYEPDAAFIRRIEMYRSSHGNRQVR 634
Query: 673 VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
VYF++Y S E Q++ + +RRE +F LIR++ M +
Sbjct: 635 VYFMYYGGSVEEQRYLSAVRREKDSFAKLIRERGNMAL 672
>gi|380020346|ref|XP_003694048.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF-like
[Apis florea]
Length = 977
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 218/406 (53%), Gaps = 50/406 (12%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++LE+ I E+L E GLVI++ GL + + A++L + G L+++ + N Q
Sbjct: 184 IMLEYENQIFLEILHE--DGLVIIAKGLGIETIFANILRAYI-DPGNLIIVLGTTNHDEQ 240
Query: 61 IIHYLAPNAPL--LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
L N L LP +T++ ++ R +Y G + F++ IL+VDLL +R+P + G
Sbjct: 241 YFIDLLKNYGLKQLPRVVTSECSSDEREVMYLEGGVLFMSGPILVVDLLKKRIPLHLVTG 300
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+++ H + + E F R+ + N+ +I+AF++ A GF + ER+MK+LF++KL
Sbjct: 301 ILVYRAHNILNSYQEAFALRLYRQNNKTGFIKAFTNSSLAFTVGFMQVERVMKALFVKKL 360
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVE 237
+LWPRF ++ LE+ P V+++ V ++ M IQ ++L++M+ +KE+++ NK +D++
Sbjct: 361 YLWPRFHTLINSSLEKHKPDVIELHVKITPKMLNIQISLLDIMNYIVKELKRLNKYLDLD 420
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DL VEN + K F + L+ QLDPIWH L +KQL+SDLKTLR LL L D+V++ L
Sbjct: 421 DLNVENAITKKFHKQLQLQLDPIWHQLSSTSKQLLSDLKTLRALLASLTYEDSVSFYSML 480
Query: 298 DTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
+ LR E S W+ +S +F AK+RVY +K +LK
Sbjct: 481 NRLRTMEYAIKNSGWLMLDSVDALFKNAKERVY------------------NEKNELKP- 521
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
E PKW L EVL EI+ + K+
Sbjct: 522 -----------------------ESTPKWIALTEVLLEIQNDNKKK 544
>gi|389742929|gb|EIM84115.1| hypothetical protein STEHIDRAFT_61821 [Stereum hirsutum FP-91666
SS1]
Length = 996
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 248/433 (57%), Gaps = 32/433 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ E+ L++L+ GL L +++ +++ ++ + ++L+++SP ++ I
Sbjct: 6 LLPFHKSILEEIHDPKANDLLLLARGLGLRRIVCTLMQIYESPENLVVLVNASPEEEAAI 65
Query: 62 ---IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ + P L S + ++ R LY G + VT RIL+VD+L +PT ++G
Sbjct: 66 GEELGIMGCRRPGLRS-VGYEMGKKDRCDLYKKGGLVSVTSRILVVDMLQSDMPTELISG 124
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
L++L+ +T S E FI R+ + N+ +++AF+D+P + SG + + IMK L +R +
Sbjct: 125 LLVLHAERVTALSLEAFIVRLYREKNKAGFLKAFTDQPEHITSGLSPLKNIMKELQLRSV 184
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVE 237
H++PRF +V + LE++ VV++ PM++ M I AI++ M + + E++++N +D++
Sbjct: 185 HIYPRFHADVKDSLEKKRVDVVELYQPMTELMSDIHHAIVQCMTSTVAELKRSNTHMDLD 244
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DL VEN F+SFD I+RRQLDP+WH +G +TKQLVSDL TLR+LL YL+ YD + + YL
Sbjct: 245 DLNVENAYFRSFDAIVRRQLDPVWHKVGPRTKQLVSDLATLRRLLTYLLTYDPLAFHSYL 304
Query: 298 DTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
+T+ S S +S W+ ++++ IF AK+R Y ++ N +
Sbjct: 305 ETIIASNSISAAGNARHNQSPWLLTDAAHIIFSSAKRRCYTLDQTTSSSANASPQPRVED 364
Query: 349 K---------------RKLKKVDNNEDEDGGTSSTSTKVV---LEEVLEEAPKWKVLREV 390
+ +L + DN G + + + +E VLEE PKW +L +V
Sbjct: 365 ELDDEEGWNALDEMEFGRLNQTDNVRGAKGKGKAKRPRWLPKGMEPVLEELPKWNLLADV 424
Query: 391 LEEIEEERLKQAS 403
L+EIE+E ++Q S
Sbjct: 425 LKEIEDEIMRQES 437
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 64/95 (67%), Gaps = 5/95 (5%)
Query: 623 VPP-----VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLF 677
VPP V Y+ + D +L ++P IV++ P+ FVR+IEVY++ NP + ++VYF+
Sbjct: 622 VPPPQAVLVRAYSDDGDDRMLAEIQPRFIVMFEPNQDFVRRIEVYRSSNPGLAVRVYFML 681
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
Y+ S E K+ AG+R+E +FE+LI+++ M++PI
Sbjct: 682 YQTSCEEHKYLAGLRKEKDSFENLIKERGSMLLPI 716
>gi|326435778|gb|EGD81348.1| hypothetical protein PTSG_11379 [Salpingoeca sp. ATCC 50818]
Length = 830
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 185/298 (62%), Gaps = 2/298 (0%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L F Q + +++ + + L++ G+ L +L+ S+L +H + +L+++++
Sbjct: 36 LLPFQQDMFKDIMADVDA-LLVTGQGMGLHRLLVSMLRVHCDPKSLVLVINANVTTVELA 94
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
L+ + P ++ D + R +Y G + FVT RIL+VD+L R+P +N+ G+++
Sbjct: 95 TEELSLSTSFPPKILSMDQLSTDRRDIYLEGGVVFVTSRILVVDMLMGRVPMANVHGIVV 154
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
+ H + S+E FI R+ + NR +I+A +D +V GF E++M+SL++ +L+LW
Sbjct: 155 PDAHRVIPTSSEAFILRLFRHENRTGFIKAITDSAQGLVGGFNLLEKVMRSLWVSQLYLW 214
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLT 240
PRF+ V + L P V +V+V M+ M IQ AI ++M +CLK++RK +++E LT
Sbjct: 215 PRFEKRVIDTLSTRQPEVFEVKVDMTSTMQLIQLAISDLMVSCLKQLRKLRPSLEMEFLT 274
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
VE GLF +FD+ LRRQLDP+WH LG +TKQLV +LKTLR + YL +YD V++ YL+
Sbjct: 275 VERGLFPAFDQALRRQLDPVWHTLGFRTKQLVKELKTLRTMAKYLDQYDPVSFYFYLE 332
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
IL+ +KP IV Y P ++ R++E+Y++ +P + L VYF+ Y S + Q++ + IR E
Sbjct: 473 ILNDVKPKTIVFYDPHLACAREVELYQSAHPEVDLHVYFMMYRTSFQEQQYLSSIRHEKE 532
Query: 697 AFESLIRQKSFMMIPIDQ 714
AFE +I K M +P DQ
Sbjct: 533 AFERIITAKRTMALPADQ 550
>gi|219129574|ref|XP_002184960.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217403455|gb|EEC43407.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 975
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 212/394 (53%), Gaps = 47/394 (11%)
Query: 71 LLPSEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
LLP+ +T + R LY G IF +T RI IVDLLT + + GL++ + +TE
Sbjct: 141 LLPTMVTNEAGQGKDRAALYDRGGIFCITSRIFIVDLLTNIASPNKIDGLLVAHGENVTE 200
Query: 130 NSTETFICRIIKSLNR---EAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQV 186
STE FI RI + + +I+AF+D P ++SGFAK ++I+KSL +R+L+L+PRF
Sbjct: 201 QSTEAFILRIFQGQKQPFGSGFIKAFTDAPDQLMSGFAKVDKILKSLHVRRLYLYPRFHE 260
Query: 187 NVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV---DVEDLTVEN 243
++ +ELE PP V ++ +S +Q AI + AC++E++ + + + +L++EN
Sbjct: 261 SIRQELESHPPSVTELHQELSPLQKEMQNAIAAAVSACIRELKSSTTLLEWNDSELSIEN 320
Query: 244 GLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD---TL 300
+ +FD + RQL+ WH L +TKQLV DL+TLR L L++YD VT+ K ++ T+
Sbjct: 321 CVTTNFDRAISRQLEHDWHRLKPQTKQLVQDLRTLRTLFQSLIQYDCVTFWKLINSIKTM 380
Query: 301 RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNED 360
+ + S+W+ ++ +F AK RVY +R
Sbjct: 381 SAASRYPSLWLLTPAADVLFRKAKARVYNISRPR-------------------------- 414
Query: 361 EDGGTSSTSTKVV-LEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGI 419
TS S V L+ +LEE PKWK+L+++L+EI RL A V DG N
Sbjct: 415 ---PTSQLSHPVAHLKAILEENPKWKLLKQILDEI---RLDDAQRVRNVDCDGPRN---- 464
Query: 420 VLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
VLV KD+ + L + + +G ++ + W ++L
Sbjct: 465 VLVMVKDDKTVDTLREYLTDGKDRTLTLRWLRFL 498
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 628 FYALESDQP--ILDILKPFVIVVYHPDMSFVRQIEVYKA-ENPSIKLKVYFLFYEDSTEV 684
+ +++ DQ L ++P +V+Y D++F+R +E+Y+A S ++V+FL +E S+E
Sbjct: 609 YSSIDGDQSSLFLQDMEPQYVVLYDTDVAFIRSVEMYEALSTHSDPVRVFFLMFEASSEQ 668
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
+ F + RE AFE +I K M P QV
Sbjct: 669 KTFMKTLEREQNAFERMIDHKKTMPPPALQV 699
>gi|426381294|ref|XP_004057285.1| PREDICTED: DNA repair endonuclease XPF [Gorilla gorilla gorilla]
Length = 867
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 227/456 (49%), Gaps = 83/456 (18%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + ++ ELL GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G + F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K FD K+ ++ +R
Sbjct: 253 SLENAIGKPFD-----------------------------KVEEFYIRM----------- 272
Query: 300 LRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNE 359
+ W+F +SS +F A+ RVY K K +KV
Sbjct: 273 ------LHNCWLFLDSSTSMFINARARVYHLP--------------DAKMSKKEKVSEKM 312
Query: 360 DEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGI 419
+ G + E VLE PKW+ L EVL+EIE A ++E L G G
Sbjct: 313 EIKEGQETKK-----ELVLESNPKWEALTEVLKEIE------AENKESEALGGP----GQ 357
Query: 420 VLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
VL+ D+ +C QL D I G+E ++ R+ +EK
Sbjct: 358 VLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEK 393
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVR 657
K ++ +L +D A +P+ +H SD +L ++P +V+Y +++FVR
Sbjct: 481 KHEEFDVNLSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVR 540
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
Q+E+Y+A P L+VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 541 QLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 594
>gi|453089008|gb|EMF17048.1| DNA repair protein [Mycosphaerella populorum SO2202]
Length = 950
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 215/427 (50%), Gaps = 71/427 (16%)
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R +Y G I +T RILIVD L+ L + + GLI+L+ + S E FI RI +
Sbjct: 111 QRERMYKRGGICSITSRILIVDFLSGLLDPATVTGLIVLHAERVAATSLEAFIVRIFRQK 170
Query: 144 NREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDV 202
N++ +++AFSD+P SGF I+++LF+RK L+PRF V V++ LE + V+++
Sbjct: 171 NKKGFLKAFSDQPEPFTSGFQPLTNILRNLFLRKPVLYPRFHVGVAKSLEGKRKAEVIEL 230
Query: 203 RVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE-DLTVENGLFKSFDEILRRQLDPIW 261
VPM++ M IQ A+LE ++ + E++K N ++ D +V++ L +SFD I+RRQLDP+W
Sbjct: 231 EVPMTEAMRNIQSAVLECVEVSIAELKKMNTGIIDLDFSVDSALHRSFDSIVRRQLDPVW 290
Query: 262 HILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE-----SFR---SVWIFA 313
H + +TK +V DL LR +L L+ YDAV + +YLDT+ + S R S W+F
Sbjct: 291 HRVSFRTKMIVRDLTMLRTILHSLLAYDAVEFNRYLDTVLAASQPPPGSSRKEVSPWLFL 350
Query: 314 ESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVV 373
+++ + D AK RVY +DG N + +
Sbjct: 351 DAASVLLDNAKGRVYTGKITDGPLANVEHEG----------------------------- 381
Query: 374 LEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQL 433
L VLEE PKW +L E+LEEIE + ++E G +L+ C D +C QL
Sbjct: 382 LNPVLEELPKWSLLAEILEEIERDVYFNPQPQDE--------SSGSILIMCGDHGTCRQL 433
Query: 434 EDCIR------------NGSEK------------VMREEWEKYLLSKVQLRSVQTSSKKK 469
+ ++ +GSE +MR + YLL K V ++
Sbjct: 434 REYLQTMRNEVDGDKAADGSEDGLPKERQPSGKYMMRRKLRNYLLWKRDFARVSSTLFAA 493
Query: 470 KSKEPKG 476
KE G
Sbjct: 494 NEKEING 500
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 63/98 (64%)
Query: 613 DTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK 672
D E D K + +H Y + D +L+ +KP +++Y PD +F+R+IEVY++ + S +++
Sbjct: 583 DYYELYDMKDLVLIHPYDGDMDDHLLEEIKPRYVIMYEPDAAFIRRIEVYRSSHTSRQVR 642
Query: 673 VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
VYF++Y S E Q++ + +RRE +F LIR++ M +
Sbjct: 643 VYFMYYGASVEEQRYLSTVRREKDSFTKLIRERGNMAM 680
>gi|50307255|ref|XP_453606.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642740|emb|CAH00702.1| KLLA0D12210p [Kluyveromyces lactis]
Length = 1056
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 200/738 (27%), Positives = 338/738 (45%), Gaps = 113/738 (15%)
Query: 7 QHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-LHSPSQ--GT-----LLLLSSSPNLK 58
QH+I E L L+++ GLS+ +++++L L +P++ GT +L+L++S +
Sbjct: 95 QHLILENLLVSENALLVIGKGLSVLSIVSNLLYTLSTPTRIDGTDKRSLVLVLNASSEDE 154
Query: 59 SQIIHYLAP---------------NAPLLPSEITAD-LPANHRHTLYSSGQIFFVTPRIL 102
I L + P + I++D + R Y G I VT RIL
Sbjct: 155 DIIEEELMELQWTCNEDDEEGQPGDRPF--TVISSDSFTVDQRSKRYQQGGIISVTSRIL 212
Query: 103 IVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSG 162
IVDLL+ + N+ GL+IL+ L S E+FI I ++ N+ +I+A +D +M+S
Sbjct: 213 IVDLLSGIVHPKNITGLLILHAEKLDSMSIESFIVEIYRNSNKWGFIKAITDSAESMISE 272
Query: 163 FAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPV-VVDVRVPMSKYMGGIQKAILEVM 221
FA + MK L ++++ LWPRF ++S L V+++RV ++ M IQ + E +
Sbjct: 273 FAPLAKKMKDLLLKRILLWPRFHADISSCLNTTSNTKVIEIRVSLTDSMSKIQFGLYECL 332
Query: 222 DACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRK 280
C+ E+ RK ++ E + EN L +F I+ L P WH + ++KQLV D+ TL+K
Sbjct: 333 KKCIDELNRKNPELSTEYWSFENALDSNFLRIINGVLSPKWHRISYESKQLVKDISTLKK 392
Query: 281 LLDYLVRYDAVTYLKYLDTL------RVSESF-RSVWIFAESSYKIFDYAKKRVYRFTRS 333
LL L+ YDA+ + + + + V+ + S W+ A+ S + +AKKRV
Sbjct: 393 LLTSLISYDALDFYELIQLILDANKPSVTRKYSESPWLLADESQLVISFAKKRVI----- 447
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
+DG + LE PKW+ L ++E+
Sbjct: 448 ---------------------------DDGNYN-----------LEPLPKWEQLCALMED 469
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
IE E K + + G VL+ C D+ + QL IRN K + +
Sbjct: 470 IEHESSKYPAGTQ-----------GSVLILCSDDRTSNQLRQVIRNMKSK--HNGHKNIM 516
Query: 454 LSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIR 513
L K+ + + ++ SK D V + QN +VS+ H + + R
Sbjct: 517 LDKLDIYRRRRDDMRRISK--------DIVEENEKYQNGGEMNVSRAFHKQEINTKRR-R 567
Query: 514 NQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISG 573
+G S + + + G+ ++ A + + K+ + S ++E + +
Sbjct: 568 TRGAS--------FVAAVDRLKNAQAGQGQDIDAMITSDSIKEERDRSLVSMETLGDEAA 619
Query: 574 SGNEGPADEIHSGVVG--YSGGMLETAFVEK-EVQWKRSLKTDTAESKDSKPVPPVHFYA 630
+ +++ S + G + E A V+ E W+R D K V + ++
Sbjct: 620 VKEDFDSEDELSIIEEKLQDGSIPEYAMVQNWEEVWERRKTGYKYVDNDCKIV--IETFS 677
Query: 631 LESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAG 690
SD+ IL L P I++Y P+++FVR++EVYKA + KVYF++Y DS E Q +
Sbjct: 678 TTSDEQILHELMPSYIIIYEPNLAFVRKLEVYKAIHRHNPPKVYFMYYGDSVEEQSHLSS 737
Query: 691 IRRENGAFESLIRQKSFM 708
I+RE AF LIR+ S M
Sbjct: 738 IKREKEAFTKLIREHSNM 755
>gi|301612013|ref|XP_002935520.1| PREDICTED: DNA repair endonuclease XPF [Xenopus (Silurana)
tropicalis]
Length = 875
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/455 (32%), Positives = 231/455 (50%), Gaps = 92/455 (20%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE + +L E GLVI + GL + +++ + L L+ +L+L+++ + +
Sbjct: 39 LLEHENQVFLDLFHE--DGLVITARGLGIDRILQNFLKLYCDPGNLVLVLNTNTAEEEYL 96
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + LP IT ++ R+ +Y+ G + FVT RIL+VD LT R+P + + GL+
Sbjct: 97 IDQLRSEGVTHLPRIITNEVATGERYDVYTQGGVLFVTSRILVVDFLTDRIPANLITGLL 156
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ F C L
Sbjct: 157 LYR-----------FSC------------------------------------------L 163
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
RF V+V+ L++ P VV++ V M+ M IQ +IL++M+ACLKE+++ N ++VEDL
Sbjct: 164 GDRFHVSVNSFLDKHKPEVVELHVSMTPAMLAIQSSILDIMNACLKELKRYNPALEVEDL 223
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++EN + K+FD+ +R LDP+WH LG KTK LV DLK LR LL YL +YD VT+L L++
Sbjct: 224 SLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLES 283
Query: 300 LRVSE-SF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVD 356
++ SE +F S W+F +SS +F +A+ RVY S + +K K+ D
Sbjct: 284 MKASEKAFGQNSGWLFLDSSTSMFVHARARVYHVPDSKAI-------------KKSKQSD 330
Query: 357 NNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEND 416
+NE +DG E VLE PKW+ L EVL+EIE+E ++ L G
Sbjct: 331 SNEKQDGKK---------ELVLENNPKWEALSEVLKEIEQE------NKNSEALGGP--- 372
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
G VL+ D+ +C QL + I G+E ++ + K
Sbjct: 373 -GRVLICASDDRTCAQLREYIAVGAEALLERLYNK 406
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 8/249 (3%)
Query: 468 KKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETY 527
K+ +E K L G V I + + + +E+ A+ A A R K+ D +
Sbjct: 357 KEIEQENKNSEALGGPGRVLICASDDRTCAQLREYIAVGAEALLERLYNKTFGKDEKASE 416
Query: 528 YGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGV 587
K KG N++ +P+ K+ KS K K E++ + G +E G
Sbjct: 417 VWMKRRKAITAKGSNKSMKTSLPKKP-KEGKSKQKKN-NTKTELTLTQMIGKEEEDEVGK 474
Query: 588 VGYSGGMLETAFVEKEVQ-WKRSLKTDTAESKDSKPVPPVHFYALESDQ----PILDILK 642
E++F E + + + +L +D+ +P+ +H SD +L ++
Sbjct: 475 DDVESVSQESSFEEPKYEDLQLNLPSDSYYGILKEPLTVIHPLQGCSDSYGLTRVLHEIE 534
Query: 643 PFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLI 702
P +V+Y ++SFVRQ+E+Y+A L+VYFL Y STE Q++ +R+E AFE LI
Sbjct: 535 PRYVVLYDSELSFVRQLEIYRASKQK-PLRVYFLIYGGSTEEQRYLTSLRKEKEAFEQLI 593
Query: 703 RQKSFMMIP 711
R+K+ M+IP
Sbjct: 594 REKASMVIP 602
>gi|342319150|gb|EGU11100.1| Hypothetical Protein RTG_02900 [Rhodotorula glutinis ATCC 204091]
Length = 1060
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 262/542 (48%), Gaps = 86/542 (15%)
Query: 2 VLEFHQHIIAELLQE----PNGG--LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSP 55
+L F ++I+ +L+ PN G +++++ GL L ++ + L ++ + +L+++++P
Sbjct: 44 LLPFQRNILKQLVPPENALPNAGDAMLVMAGGLGLRTIVTTFLKIYDMPEKLVLVVNATP 103
Query: 56 NLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
+ A + + +L + R +Y G +F VT RILIVD+L +P S
Sbjct: 104 EEE----RGFAEEVGMRLKVVGYELGDSQREKMYKDGGLFSVTSRILIVDMLKGTIPVSL 159
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+ GL++L+ + S E FI RI + N+ +++AFSD+P + G + + + L +
Sbjct: 160 ITGLVVLHAEEVKPTSQEAFIVRIYRQQNKLGFLKAFSDRPESFSFGLSPLQTTLMQLKL 219
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-V 234
R++ + PRF +V +L++ VV++ P++ M IQ AI+E M+ L E++++N +
Sbjct: 220 REVIIVPRFHEDVDTDLKKRKADVVELYQPLTHNMLDIQTAIIECMEMTLSEIKRSNTYL 279
Query: 235 DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294
+V+DLT EN LF SFD ++R QLDP+WH +G KT+ LV+DL TLRKLL YL+ +D V +
Sbjct: 280 EVDDLTFENALFSSFDRLVRIQLDPVWHKVGPKTRGLVNDLTTLRKLLVYLLSFDCVRFN 339
Query: 295 KYLDTLRVSESF---------RSVWIFAESSYKIFDYAKKRVY--------------RFT 331
+YL+TL S + R W+ ++ IF A+ RVY R
Sbjct: 340 QYLETLLSSHTTTIGALDRRDRPAWLGTAAADTIFSVARNRVYLQKAIAKPGEGRKEREL 399
Query: 332 RSDGVE----LNGQSKSVTG---------------------KKRKLKKVDNNEDEDGGTS 366
DG+E LN G K + V N ED++ +
Sbjct: 400 TVDGMEIPEVLNADDWLADGPTEEEEQLLRDLEETARREKEAKDRAAGVTNGEDKEDKDA 459
Query: 367 STSTKVV--------------LEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG 412
+V +E VLEE PKW VL EVL+EIE +S D
Sbjct: 460 MPPPQVPTPQKPKKKGWLPPGVEPVLEEQPKWMVLAEVLDEIE-------TSIHFSPYDP 512
Query: 413 EENDHGIVLVACKDECSCMQLEDCIRNGSEKV------MREEWEKYLLSKVQLRSVQTSS 466
+ VLV C +C+ L + + + + + + + Y K + +Q S
Sbjct: 513 YGYSNDTVLVMCNSTDTCLTLGNYLSSLNPETSEGRSFLESKLNSYFFWKAHMGKMQNSL 572
Query: 467 KK 468
K+
Sbjct: 573 KR 574
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 19/83 (22%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y + D +L+ L+P +V++ P+ SFVR+IE DS E QK+
Sbjct: 731 YLDDEDDRVLEELRPKYVVMFDPNPSFVRRIE-------------------DSVEEQKYL 771
Query: 689 AGIRRENGAFESLIRQKSFMMIP 711
+ IRRE AF LI +K M IP
Sbjct: 772 SEIRREKDAFVRLIEEKGSMAIP 794
>gi|358384839|gb|EHK22436.1| hypothetical protein TRIVIDRAFT_29672 [Trichoderma virens Gv29-8]
Length = 929
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 229/454 (50%), Gaps = 82/454 (18%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL E LVIL+ GL +L+ ++L + + L++L S ++ I
Sbjct: 16 LEYQQQLFQELRAEDE--LVILARGLGQMRLVTNLLHSYDAAGSNLIVLVGSGERENNWI 73
Query: 63 -HYLAPNAPLLPSEITADLPA--------NHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
LA +A + S L R +Y+ G IF +T RIL+VDLLT L
Sbjct: 74 GEALAEHAAISASPKARGLTVVNTDSQTVGAREKMYAKGGIFSITSRILVVDLLTGLLNP 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI R+ + N+ +++AFSD P +GF+ +M++L
Sbjct: 134 ELITGLVVLHADRVIATSLEAFILRVYRQKNKVGFLKAFSDNPDPFTTGFSPLTTMMRNL 193
Query: 174 FIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
F++K LWPRF V V++ LE ++ V+++ VPM+ M IQ AI+E C
Sbjct: 194 FLKKASLWPRFHVTVAQSLEGKKKAEVIELEVPMTDSMREIQNAIME----C-------- 241
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
VEN FD ++RRQLDP WH + KT+Q+V+DL LR LL ++ +DAV+
Sbjct: 242 --------VEN-----FDVLVRRQLDPNWHRVSWKTRQIVNDLTILRGLLSNILTFDAVS 288
Query: 293 YLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKS 344
+L++LDT+ + S +S W+F +++ IFD A++RVY
Sbjct: 289 FLQHLDTIHAAHSPPPGSTRQSQSPWLFLDAAQTIFDIARRRVY---------------- 332
Query: 345 VTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASS 404
+ + + K N D L VLEE PKW +L EVLEEI+ + +
Sbjct: 333 -SASPKSVSKSGENIDS------------LRPVLEELPKWGILAEVLEEIDRDLFFEPKV 379
Query: 405 REEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
R++ +G +L+ C + +C QL D ++
Sbjct: 380 RDD--------SNGGILIMCSNTDTCRQLRDFLQ 405
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y + D+ +L+ +KP I++Y PD +F+R++EVY++ + ++VYFL+Y S E Q
Sbjct: 574 VHAYDGDQDEHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 633
Query: 686 KFKAGIRRENGAFESLIRQKSFM 708
++ + +RRE AF LI++++ M
Sbjct: 634 RYLSSVRREKDAFTKLIKERASM 656
>gi|388581753|gb|EIM22060.1| hypothetical protein WALSEDRAFT_51071 [Wallemia sebi CBS 633.66]
Length = 965
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 278/549 (50%), Gaps = 78/549 (14%)
Query: 3 LEFHQHIIAELLQE---PNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKS 59
L FH+ I+ +L+ + N GL+IL GL L K++AS L L S + +L++++ P +
Sbjct: 5 LRFHRQILRQLIPQGIGENSGLLILGPGLGLRKIVASFLALQSDPRRLVLIINADPQEED 64
Query: 60 QIIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
I L+ P + D+ ++ R LY G + VT +IL+VD+L +P ++
Sbjct: 65 GIGDLLSLMGVARPGLRVVNFDIGSSQREELYKGGGLVSVTSQILVVDMLNGVVPVELIS 124
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
G++ E STE FI I + N++ +++AFSD P +G + +++SL IRK
Sbjct: 125 GIV--------EYSTEAFITNIYRDNNKDGFLKAFSDDPVQFNTGVTPLQTVLRSLKIRK 176
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--KVD 235
+ +WPRF V ++LE+ VV++ M+K M +Q +IL+ MDA ++E++K+N +D
Sbjct: 177 VWIWPRFHETVQQDLEKRKADVVELYPSMTKSMLDLQHSILQCMDATVQEIKKSNVSYLD 236
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
++D TV+N LFKSFD+I+R QL P+WH++ KTK ++ DL+TLR LL YL+ Y V +
Sbjct: 237 IDDFTVDNALFKSFDKIIRMQLLPVWHLIRPKTKGMIEDLRTLRNLLTYLLNYSCVELQE 296
Query: 296 YLDTLRVS--ESFR---------SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKS 344
+L+++ S E ++ S W++ +++ IF+ AK R Y
Sbjct: 297 FLESIYQSNLEDYKNSSMANKTPSPWLYLDAADTIFNTAKGRTY---------------- 340
Query: 345 VTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE-----RL 399
K VD + +++ S +V +LEE PKW VL EVL EI+
Sbjct: 341 --------KVVDGDSNKNKHRSWLPPNIV--PILEEQPKWSVLTEVLAEIDNNIHFNSTN 390
Query: 400 KQASSREEVLLDGEENDHGI----VLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLS 455
K R L+ N I L C+D+ + +Q ++++R+ E + +
Sbjct: 391 KSKDERNMTLIMCASNKVAIQLSEYLDQCEDDNNKLQTSKRAPKMMKRLLRDHLEMFKAN 450
Query: 456 KVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKI-RN 514
+ + +++ K ++P ++ A + S+QE A L + RN
Sbjct: 451 IINM----STNMKSDVQQP------------NVSNKANNPTNSEQEMSAALQRKEQFRRN 494
Query: 515 QGKSDDGDN 523
+G + G N
Sbjct: 495 EGATAYGHN 503
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ Y + D +L+ ++P I++Y P+ +FVR++E+YK+ NP I +++YFL Y S E Q
Sbjct: 606 IRAYRDDDDDTLLNEIRPKYIIMYDPNAAFVRRVELYKSSNPQIDIRMYFLMYNASVEEQ 665
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
+ +G+R+E AFE LIR+KS M++P+
Sbjct: 666 TYLSGLRKEKDAFERLIREKSTMLMPL 692
>gi|298704917|emb|CBJ28420.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1135
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 208/400 (52%), Gaps = 73/400 (18%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP + A+ R LY+SG ++ VT R+LIVDLLT+ + ++G+++ N H + E S
Sbjct: 214 LPEVVDAECTPAQRGVLYASGGVYIVTSRVLIVDLLTKTVKPEQISGMLVHNAHRVVETS 273
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
+E FI RI + N +++ F+D+P ++++GF K E+I+++L + K+ LWPRF V+E
Sbjct: 274 SEAFILRIYREGNGSGFVKGFTDEPESLLAGFGKLEKILRNLGVAKVFLWPRFHSLVAES 333
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFD 250
LER PP V ++ ++ +Q+AI+ +MD L+E+R +D +LTVE+ +F SFD
Sbjct: 334 LERRPPQVEELVQGLTAPTKEVQQAIVVLMDHTLRELRGAAPSLDSAELTVESCIFNSFD 393
Query: 251 EILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS-- 308
+RQL+P WH +G KTKQL+ DLKTLR LLDY+ RYDA+T+ + L + E ++
Sbjct: 394 RSAQRQLEPEWHRVGFKTKQLLQDLKTLRSLLDYVFRYDAITFYQLL----LGEKSKAAA 449
Query: 309 -----VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDG 363
+WI ++ ++F AK ++
Sbjct: 450 VRDPPLWIGTSAADRLFVTAKVKL------------------------------------ 473
Query: 364 GTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG----------E 413
VLEE KW++ +V++EI + L A R+ V+ E
Sbjct: 474 -------------VLEENAKWRLAADVMKEIRD--LHAARQRQRVVSKSPVPAESSAVVE 518
Query: 414 ENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
VLV KDE +C QL + G +M+ + +++
Sbjct: 519 PAGGARVLVLVKDEQTCTQLREHSAFGGPAMMKRRFLQFV 558
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 621 KPVPPVHFYALESDQP-----ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIK--LKV 673
+P+P +H Q IL L+P +V+Y PD +FVR +E Y+A P + L V
Sbjct: 759 EPLPSLHAVVFSYAQARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVV 818
Query: 674 YFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
YF+ YE S E Q++ + RE AF+SLI +K+ M +P+
Sbjct: 819 YFMLYEQSVEEQRYLTSLDRETKAFKSLIEEKARMTVPV 857
>gi|452846597|gb|EME48529.1| hypothetical protein DOTSEDRAFT_162102 [Dothistroma septosporum
NZE10]
Length = 943
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 198/366 (54%), Gaps = 55/366 (15%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y G I +T RILIVD L+ L + + GLI+L+ + S E FI RI + N
Sbjct: 111 REKMYRRGGICSITSRILIVDFLSGLLDPATVTGLIVLHAERVAATSLEAFIVRIYRQKN 170
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVR 203
+ +++AFSD P + SGF I+K+LF+RK L+PRF V V+ LE + V+++
Sbjct: 171 KAGFLKAFSDSPEPLTSGFQPLTNILKNLFLRKPVLYPRFHVTVARSLEGKRKAEVIELE 230
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
VPMS M IQ A++E ++ + E++K N ++++D ++ L ++FD I+RRQLDP+WH
Sbjct: 231 VPMSDAMKDIQNAVIECIEVSISELKKGNTGLEMDDWNADSALHRNFDAIVRRQLDPVWH 290
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRV--------SESFRSVWIFAE 314
+T+Q+V DL LR +L YL+ +AV + KYLDT+ + +S W+F +
Sbjct: 291 RTSFRTRQIVRDLSMLRTILHYLLTLNAVDFNKYLDTVLAASQPPPGSTRQNQSPWLFLD 350
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
+++ +FD AK+RVY TG ++ N E+G L
Sbjct: 351 AAHTMFDSAKRRVY-----------------TG------RITENASEEG----------L 377
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH--GIVLVACKDECSCMQ 432
LEE PKW +L E+LEEIE +V + + ND G +LV D+ + Q
Sbjct: 378 NATLEEMPKWSLLAEILEEIE----------RDVYFNPQPNDESSGSILVMVGDQGTARQ 427
Query: 433 LEDCIR 438
L + ++
Sbjct: 428 LREYLQ 433
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 63/98 (64%)
Query: 613 DTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLK 672
D E D K + +H Y + D +L+ +KP +++Y PD +F+R+IEVY++ + + +++
Sbjct: 578 DYYELYDMKDLVLIHPYDGDMDDHLLEEIKPRYVIMYEPDAAFIRRIEVYRSSHGNRQVR 637
Query: 673 VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
VYF++Y S E QK+ + +RRE AF LIR++ M +
Sbjct: 638 VYFMYYGGSVEEQKYLSTVRREKDAFAKLIRERGNMAL 675
>gi|390595928|gb|EIN05331.1| hypothetical protein PUNSTDRAFT_54777 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1029
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 220/426 (51%), Gaps = 50/426 (11%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+L FH+ I+ E+ L++L+ GL L KL+ +L ++ Q +LL++++
Sbjct: 4 FLLPFHKKILEEVHSPETSDLLLLARGLGLRKLVCYLLKIYDSPQSLVLLVNATDEEVGG 63
Query: 61 IIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
I L P + ++ R LY G + VT RIL+VD+L +PT + G
Sbjct: 64 IGEELGVMGCRRPGLRAVGYEMGKKERQDLYKRGGLICVTSRILVVDMLQGDIPTELITG 123
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+++L+ +T S E FI R+ + N +++AF+D+P + SG + + IMK L +R++
Sbjct: 124 ILVLHAERVTALSLEAFIVRLYRERNTTGFLKAFTDQPEHITSGLSPLKNIMKELQLRRV 183
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVE 237
H++PRF V L R V+++ P+++ M I +AI++ M L E+++ N +D++
Sbjct: 184 HIYPRFHQEVQHSLARRRADVIELYQPLTEAMSDIHQAIVQCMTTTLSELKRANTTLDLD 243
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
D +EN F+SFD I+RRQLDP+WH +G +TKQLV+DL TLR+LL YL+ YD + + YL
Sbjct: 244 DFNIENAYFRSFDLIVRRQLDPVWHKVGPRTKQLVNDLATLRRLLSYLLTYDPLAFHAYL 303
Query: 298 DTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
+TL + S S W+ +++ IF AK+R Y + G G+ K V
Sbjct: 304 ETLIAANSVSASGGPKVNHSPWMLTDAANIIFREAKRRCYTVSAPIG---KGKGKPVV-- 358
Query: 349 KRKLKKVDNNEDEDG--------GTSSTSTKVV-------------------LEEVLEEA 381
+D +DED GT T ++ VLEE
Sbjct: 359 ------IDLADDEDAWDALDEIQGTVGTKLPTADHGKGKEKEGERPAWLPEGMDPVLEEL 412
Query: 382 PKWKVL 387
PKW +L
Sbjct: 413 PKWALL 418
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y+ + D +L ++P IV++ P+ FVR++EVY++ +P + ++VYF+ Y+ S E
Sbjct: 662 VRAYSDDGDDMMLAEIQPRFIVMFEPNQDFVRRVEVYRSSHPGLAVRVYFMVYQLSCEEH 721
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
+F A RRE AFESLI+++ M++PI
Sbjct: 722 RFLAAQRREKEAFESLIKERGSMLLPI 748
>gi|452821619|gb|EME28647.1| DNA excision repair protein ERCC-4 [Galdieria sulphuraria]
Length = 864
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 255/468 (54%), Gaps = 39/468 (8%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
M+LE+ + + E+ E GL I+ GL + ++I+ ++ Q +L L S +
Sbjct: 1 MILEYERLALKEV--EEQDGLCIVGKGLGVQRIISKLVDNLCQQQKLILGLRFSKDWLHS 58
Query: 61 IIHYLAPNAP----LLPSEITADLPANHRHTLYSSGQIFFV-TPRILIVDLLTQRLPTSN 115
+ + N L P EI A R ++Y Q F V T IL+ DLL + +P
Sbjct: 59 LEQWFLVNQDIEPHLYPREIDASYSRAERQSIYHLEQGFLVVTSTILVHDLLLKVIPAEK 118
Query: 116 LAGLIILNTHALTENS-TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
++ +++ L ++S E FI R++K N++ I+AFS++ GF E+ M++L
Sbjct: 119 VSCMVVNEAEFLVDDSRIECFIIRLLKEQNKKCSIKAFSERAEWFTRGFHLVEKAMRNLK 178
Query: 175 IRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK- 233
+ KL+LWPRF+V V + L + +V++ V + M + KAILE M ACL E+++ NK
Sbjct: 179 VTKLYLWPRFRVEVDQCLLKSSGQLVELEVRQTPKMASLSKAILEAMGACLVELKRRNKS 238
Query: 234 VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
+DV +L ++N LFKSFD ++ +QL+P+WH + TKQL+ DL+TLR +L + + + V++
Sbjct: 239 IDVSELDIQNALFKSFDFVILKQLEPMWHNVSSYTKQLIRDLRTLRNILTFSTKLNCVSF 298
Query: 294 LKYLDTLRVSE-SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL 352
+L + SE + +S W+ +++ KIF +AK R+Y K +
Sbjct: 299 FNFLMAITQSEDTSKSHWLMSKTGEKIFTFAKSRIY------------------VKSKDN 340
Query: 353 KKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR-EEVLLD 411
K ++ E + TS +S + ++ +LE +PKW VL +L+EI R K + +E+L
Sbjct: 341 KDLERKEKKPKFTSGSSIPLDMKVILEPSPKWSVLHSLLQEI---RAKTNGEKWDEMLSM 397
Query: 412 GEENDHGI-VLVACKDECSCMQLEDCIRNGS--EKVMREEWEKYLLSK 456
G +G V++ KD + ++L + +++ E+ +R+E++K + S+
Sbjct: 398 G----YGCRVIIFVKDVSTMIELSEIVKDAKAPEEYLRKEFQKLMKSR 441
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 620 SKPVPPVHFYALESDQP------ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKV 673
S VP + LE+ +L+ LKP +++Y P +RQ+EVY+ E + L+V
Sbjct: 503 SLQVPDIEIVTLEASTESRKGLEVLESLKPRFVIIYEPHNCLIRQLEVYQNEFTELPLEV 562
Query: 674 YFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
+ L YE+S E KF+ + E +FE LIR+K M++ +D
Sbjct: 563 FCLVYENSVEKDKFEKALEYEAHSFERLIREKENMVVFVD 602
>gi|261192729|ref|XP_002622771.1| DNA repair protein RAD1 [Ajellomyces dermatitidis SLH14081]
gi|239589253|gb|EEQ71896.1| DNA repair protein RAD1 [Ajellomyces dermatitidis SLH14081]
Length = 925
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 230/452 (50%), Gaps = 90/452 (19%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + +EL E LVIL+ GL L +++ ++L + + L+++ + +L+++ I
Sbjct: 16 LQYQQDLFSELRAE--DELVILARGLGLLRIVTNLLHSYDAAGNNLIIVVGAGSLENEWI 73
Query: 63 HYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL 122
G+ + L + GLI+L
Sbjct: 74 -----------------------------GE---------------EILDPETITGLIVL 89
Query: 123 NTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP 182
+ +T S E FI RI + N+ ++AFSD P GF +M++LF+RK LWP
Sbjct: 90 HAEKITATSLEAFIIRIYRQFNKVGCLKAFSDSPEPFTIGFNPLANMMRNLFLRKPSLWP 149
Query: 183 RFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
RFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++A ++E++K+N +D+ED T
Sbjct: 150 RFQVTVAESLEGRKKAEVIELEIPMTDKMRDIQNAVLECVEANIRELKKSNSGLDIEDWT 209
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
V++ L + FD +RRQL+ +WH + +TKQ+ +DL LR +L L+ YD+V+++KYLDT+
Sbjct: 210 VDSALHQDFDVSIRRQLEHMWHRVSFRTKQIANDLTVLRSILHSLLTYDSVSFIKYLDTI 269
Query: 301 RVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL 352
+ S S W+F ++++ +F AK RVYR
Sbjct: 270 IAAHSPPPGSTRQNYSPWLFLDAAHVLFQTAKSRVYR----------------------- 306
Query: 353 KKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG 412
K+DN + + S LE VLEE PKW VL +VL+EIE S+ +L G
Sbjct: 307 GKLDNRQ---FIPDTASLPTALEPVLEEQPKWSVLADVLDEIER------STYLNPVLPG 357
Query: 413 EENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
+ N G +LV C D +C Q+ + + K+
Sbjct: 358 DSN--GTILVMCSDRKTCCQIREYLETMRIKI 387
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 60/89 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V+ Y + D +L+ +KP I++Y PD +F+R++EVY++ + + +++VYFL+Y S E Q
Sbjct: 540 VYPYDGDMDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVYFLYYGGSVEEQ 599
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ + +R+E AF LI++K M + I+
Sbjct: 600 RYLSAVRKEKDAFTKLIKEKGSMSLTINH 628
>gi|239610211|gb|EEQ87198.1| DNA repair protein RAD1 [Ajellomyces dermatitidis ER-3]
Length = 925
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 230/452 (50%), Gaps = 90/452 (19%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ Q + +EL E LVIL+ GL L +++ ++L + + L+++ + +L+++ I
Sbjct: 16 LQYQQDLFSELRAE--DELVILARGLGLLRIVTNLLHSYDAAGNNLIIVVGAGSLENEWI 73
Query: 63 HYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL 122
G+ + L + GLI+L
Sbjct: 74 -----------------------------GE---------------EILDPETITGLIVL 89
Query: 123 NTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP 182
+ +T S E FI RI + N+ ++AFSD P GF +M++LF+RK LWP
Sbjct: 90 HAEKITATSLEAFIIRIYRQFNKVGCLKAFSDSPEPFTIGFNPLANMMRNLFLRKPSLWP 149
Query: 183 RFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
RFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++A ++E++K+N +D+ED T
Sbjct: 150 RFQVTVAESLEGRKKAEVIELEIPMTDKMRDIQNAVLECVEANIRELKKSNSGLDIEDWT 209
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
V++ L + FD +RRQL+ +WH + +TKQ+ +DL LR +L L+ YD+V+++KYLDT+
Sbjct: 210 VDSALHQDFDVSIRRQLEHMWHRVSFRTKQIANDLTVLRSILHSLLTYDSVSFIKYLDTI 269
Query: 301 RVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKL 352
+ S S W+F ++++ +F AK RVYR
Sbjct: 270 IAAHSPPPGSTRQNYSPWLFLDAAHVLFQTAKSRVYR----------------------- 306
Query: 353 KKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDG 412
K+DN + + S LE VLEE PKW VL +VL+EIE S+ +L G
Sbjct: 307 GKLDNRQ---FIPDTASLPTALEPVLEEQPKWSVLADVLDEIER------STYLNPVLPG 357
Query: 413 EENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
+ N G +LV C D +C Q+ + + K+
Sbjct: 358 DSN--GTILVMCSDRKTCCQIREYLETMRIKI 387
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 60/89 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V+ Y + D +L+ +KP I++Y PD +F+R++EVY++ + + +++VYFL+Y S E Q
Sbjct: 540 VYPYDGDMDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTNREVRVYFLYYGGSVEEQ 599
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ + +R+E AF LI++K M + I+
Sbjct: 600 RYLSAVRKEKDAFTKLIKEKGSMSLTINH 628
>gi|349581792|dbj|GAA26949.1| K7_Rad1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1100
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 188/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S K + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNK--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|6325235|ref|NP_015303.1| Rad1p [Saccharomyces cerevisiae S288c]
gi|131810|sp|P06777.1|RAD1_YEAST RecName: Full=DNA repair protein RAD1
gi|172325|gb|AAA34934.1| RAD1 protein [Saccharomyces cerevisiae]
gi|1039455|gb|AAB68165.1| Rad1p: UV endonuclease [Saccharomyces cerevisiae]
gi|285815514|tpg|DAA11406.1| TPA: Rad1p [Saccharomyces cerevisiae S288c]
Length = 1100
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 188/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S K + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNK--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|323350268|gb|EGA84414.1| Rad1p [Saccharomyces cerevisiae VL3]
Length = 897
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKILVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|449541351|gb|EMD32335.1| hypothetical protein CERSUDRAFT_118713 [Ceriporiopsis subvermispora
B]
Length = 967
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 284/569 (49%), Gaps = 62/569 (10%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ ++ L+++S G+ L +++ +L ++ Q + L+++S + +S I
Sbjct: 4 LLSFHKTILEKIHDPSTSELLLISRGIGLRRIVCKLLQIYDSPQNLVFLVNASQDEQSAI 63
Query: 62 IHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P I + R LY G +F VT +I VD+L +P + G+
Sbjct: 64 GEELGVMGCRDPGLRMIEFETGRKDRQDLYKRGGLFSVTSQIFTVDMLYGDIPIHLITGI 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++L+ +T S FI R+ + N+ +++AFSD+P + +G + + +MK L IR +H
Sbjct: 124 LVLHAEKVTITSPVAFIVRLYREKNQTGFLKAFSDQPEHITNGLSPLKNVMKELQIRTVH 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
++PRF V+V L+++ P V+++ M+ M I AI++ M L E+++T+ +D ED
Sbjct: 184 IYPRFHVDVKACLDKKQPDVIEIHQHMTDAMREIHHAIVQCMTITLSELKRTSTDLDTED 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L V+ FK FD +RR LD WH +G K +QL++D+ TLR+LL++L+RYDAV + YLD
Sbjct: 244 LNVDEAYFKDFDHRVRRVLDKEWHKVGLKARQLMNDIHTLRELLEFLLRYDAVKFQNYLD 303
Query: 299 TLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
L S + +S W+ ++++ IF+ +K+R Y ++ + + S T
Sbjct: 304 HLVASNTVNEQGNARVHQSPWMLTDAAHTIFEQSKRRCY------TIDPSAKRISSTPAP 357
Query: 350 RKLKKVDNNEDE---------DGGTSSTSTK------------VVLEEVLEEAPKWKVLR 388
R D +E+E + GTS+ ++K + VLEE PKW VL
Sbjct: 358 RH----DEDEEEWAILDELERNDGTSNGASKNESMPKRPSWLPPTMNPVLEELPKWTVLA 413
Query: 389 EVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR---------N 439
+VL+EIEEE +++ S L VL+ +C +L D +
Sbjct: 414 DVLQEIEEETMRRQSQ-----LTALSPGTNTVLIMSSSAITCEELSDFLSQMDSTSPRGQ 468
Query: 440 GSEKVMREEWEKYLLSKVQL--RSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSV 497
K+M + YL K + + T K S++ + GI + + + A++
Sbjct: 469 QGRKMMMKHLRLYLSKKAEATKQESHTQGKSNGSRDKRDDGISEALQKKDRERRERAANR 528
Query: 498 SKQEHDALLAAASKIRNQGKSDDGDNPET 526
+ A A+ +++ G+S G +P+T
Sbjct: 529 RRIRGG---APAATLKDAGRSGSGGHPDT 554
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y +SD +L ++P IV+Y P + F+R++EVY+ NP + ++VYFL Y DS+E K+
Sbjct: 604 YHEDSDDQMLQEIQPRFIVLYEPSLEFIRRVEVYRNSNPGLGVRVYFLQYHDSSEEVKYL 663
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
+RRE +FE LI+ + M++PI
Sbjct: 664 RQVRREKESFERLIKDRGRMLMPI 687
>gi|190407924|gb|EDV11189.1| UV endonuclease [Saccharomyces cerevisiae RM11-1a]
gi|323331265|gb|EGA72683.1| Rad1p [Saccharomyces cerevisiae AWRI796]
gi|365762472|gb|EHN04006.1| Rad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1100
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKILVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|151942770|gb|EDN61116.1| UV endonuclease [Saccharomyces cerevisiae YJM789]
Length = 1100
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKILVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|164660022|ref|XP_001731134.1| hypothetical protein MGL_1317 [Malassezia globosa CBS 7966]
gi|159105034|gb|EDP43920.1| hypothetical protein MGL_1317 [Malassezia globosa CBS 7966]
Length = 915
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 258/493 (52%), Gaps = 67/493 (13%)
Query: 2 VLEFHQHIIAELL---QEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLK 58
+L FH+ I+ L+ E LV+++ GL L ++++++L +++ ++++++S
Sbjct: 10 LLPFHRAILHRLIPDDDELRDLLVVIAPGLGLRRVLSTLLRVYARPTCLVVVVNASSKDV 69
Query: 59 SQIIHYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNL 116
+ I H L + ++ ++ A R +Y S I VT RILIVD+L++R+P S +
Sbjct: 70 NGINHDLGTLGLGHSAVRDVHHEMSAKQRADVYVSSGIVSVTSRILIVDMLSKRIPISRI 129
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIR 176
G+++L+ ++ S E FI R+ + N++ +++AFSD + +GF K + IM L +R
Sbjct: 130 TGVVVLHAEQVSPVSIEAFILRVYRQENKDGFVKAFSDNVEQLANGFHKLQTIMSQLRLR 189
Query: 177 KLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVD 235
++ +WPRF ++ ++L + V+++ P++ M IQ AI+E ++ L E+R + D
Sbjct: 190 QVDIWPRFHQDIDKDLVKRRADVIELHQPLTPRMVSIQNAIIECLEGTLHEIRLSKLAAD 249
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
+ED VE+ ++++FD +RRQL+P+WH L TKQLV DL TLR LL L+ YD+V++
Sbjct: 250 MEDFDVEHTMYRAFDVAVRRQLEPVWHRLSPSTKQLVGDLNTLRHLLHALLSYDSVSFYI 309
Query: 296 YLDTLRVSES---------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT 346
YL+T+ S + +S W+ +++ IF A+ R++
Sbjct: 310 YLETILASNAPSTEAGAFQRQSQWLMTDAANIIFHEARARIW------------------ 351
Query: 347 GKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSRE 406
G+++ E G T E VLEE PKWK+L +VL EIE++ S+
Sbjct: 352 GERQ----------ECGDT---------ELVLEELPKWKLLVDVLYEIEQDIYTNRSA-- 390
Query: 407 EVLLDGEENDHGIVLVACKDE-CSCMQLEDCIRNGSEKVMREEWEK-----YLLSKVQLR 460
++H I+++A D S +++ + G K + K Y K L+
Sbjct: 391 -------TSNHTILIMAKSDRTVSQLRMWLSLAEGDFKTPGRSYTKACLNDYFAWKKNLQ 443
Query: 461 SVQTSSKKKKSKE 473
S Q S K + E
Sbjct: 444 SFQHESPGKDNNE 456
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKA-ENPSIKLKVYFLFYEDSTEV 684
V Y ++D +L L+P +++Y P+ FVRQ+E+Y+A + + +LK+YFL Y DS E
Sbjct: 555 VQSYQDDNDDSLLQELRPRYVIMYDPNAQFVRQVEIYRATQEKTPELKIYFLLYTDSVEE 614
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIPI 712
Q + A +RRE +FE LIR+K+ M IP+
Sbjct: 615 QMYLAALRREKDSFERLIREKATMAIPL 642
>gi|259150134|emb|CAY86937.1| Rad1p [Saccharomyces cerevisiae EC1118]
Length = 998
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKILVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|256270540|gb|EEU05724.1| Rad1p [Saccharomyces cerevisiae JAY291]
Length = 1100
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKILVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|323335097|gb|EGA76387.1| Rad1p [Saccharomyces cerevisiae Vin13]
gi|323346244|gb|EGA80534.1| Rad1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1100
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKXLVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|345489848|ref|XP_001600324.2| PREDICTED: DNA repair endonuclease XPF-like [Nasonia vitripennis]
Length = 1022
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 195/331 (58%), Gaps = 6/331 (1%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + E+LQE GLVI + GL L + ++L +S +++L ++ + ++
Sbjct: 146 MLEYENQMFLEILQE--DGLVITAKGLGLETVFTNILKAYSDPGQLVIVLGTNDDEETYF 203
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L LP ++A + R +Y G + F++ RIL+VDLL R+P + ++G++
Sbjct: 204 IEQLKNQGVKHLPRIVSAQCLSEEREVMYLEGGVLFISGRILVVDLLKNRVPLNLVSGML 263
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H++ + E F R+ + N+ +I+AF++ A GFA+ E++MK L+++KL+L
Sbjct: 264 VYRAHSILNSHQEAFALRLYRKTNKTGFIKAFTNSALAFTVGFAQVEQVMKKLYVKKLYL 323
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V+ L + P V+++ V ++ M IQ A+L+VM+ ++E++K NK +D+++L
Sbjct: 324 WPRFHKIVNTSLSKYKPEVIELHVKLTAKMLAIQTALLDVMNYMVQELKKINKYIDLDEL 383
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F + L+ QLDPIW L K+KQL+SDLKT R LL L DAV++ + +
Sbjct: 384 TVENAVAKKFHKQLQLQLDPIWDQLSFKSKQLISDLKTQRSLLMCLTHEDAVSFYAMISS 443
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVY 328
L+ E S W + +F AK R+Y
Sbjct: 444 LQTMEYAMKSSGWTVLDVVDDMFKNAKARIY 474
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
LD ++P +++Y D+S VRQ+EVY+ + PSI LKV+FL Y S E Q + +RRE A
Sbjct: 656 LDEVQPSYVIMYAADISTVRQLEVYQNKYPSISLKVFFLIYGGSVEEQAYLTSLRREKDA 715
Query: 698 FESLIRQKSFMMIPIDQ 714
F+ L+ K+ M++P +Q
Sbjct: 716 FDKLVFAKTTMVVPAEQ 732
>gi|392295988|gb|EIW07091.1| Rad1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1100
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIYILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRRDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|172318|gb|AAA34929.1| RAD1 protein (putative); putative [Saccharomyces cerevisiae]
Length = 972
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 298/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIV+LL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVNLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKMLVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S K + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNK--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA K+RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVEKLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|207340464|gb|EDZ68802.1| YPL022Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1100
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 186/655 (28%), Positives = 297/655 (45%), Gaps = 99/655 (15%)
Query: 76 ITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
+TAD L R LY SG I +T RILIVDLL+ + + + G+++LN +L NS E+
Sbjct: 193 VTADSLSIEKRRKLYISGGILSITSRILIVDLLSGIVHPNRVTGMLVLNADSLRHNSNES 252
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI I +S N +I+AFS+ P V F+ MK L ++ + LWPRF+V VS L
Sbjct: 253 FILEIYRSKNTWGFIKAFSEAPETFVMEFSPLRTKMKELRLKNVLLWPRFRVEVSSCLNA 312
Query: 195 EPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSF 249
V++V+V ++ M IQ ++E + C+ E+ RK ++ ++ +EN L +F
Sbjct: 313 TNKTSHNKVIEVKVSLTNSMSQIQFGLMECLKKCIAELSRKNPELALDWWNMENVLDINF 372
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSES 305
+ + P WH + ++KQLV D++ LR LL LV DAV + LD + S S
Sbjct: 373 IRSIDSVMVPNWHRISYESKQLVKDIRFLRHLLKILVTSDAVDFFGEIQLSLDANKPSVS 432
Query: 306 FR---SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDED 362
+ S W+ + + + YAKKR++
Sbjct: 433 RKYSESPWLLVDEAQLVISYAKKRIFYKN------------------------------- 461
Query: 363 GGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLV 422
E LEE PKW+ L +L +I ER+ G LV
Sbjct: 462 ------------EYTLEENPKWEQLIHILHDISHERMTNHL-------------QGPTLV 496
Query: 423 ACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
AC D +C++L + N S + + + LL+K++ Q KK KE +
Sbjct: 497 ACSDNLTCLELAKVL-NASNR--KRGVRQVLLNKLKWYRKQREETKKLVKEVQSQDTFPE 553
Query: 483 VAPVKIAQNAEASSVSKQEH----DALLAAASKIRNQGKSDD-----GDNPETYYGSKGP 533
A + ++ V+ + + +AA +RN G + D D+ + KG
Sbjct: 554 NATLNVSSTFSKEQVTTKRRRTRGASQVAAVENLRNAGTNVDMEVVFEDHKLSEEIKKGS 613
Query: 534 GRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGG 593
G G+ N A DSK E++ I ++G A E +G + Y G
Sbjct: 614 GDDLDDGQEEN--------AANDSKIFEIQEQENEILI----DDGDA-EFDNGELEYVGD 660
Query: 594 MLE--TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHP 651
+ + T K++ + + + + +D + F +L +D L + P I+++ P
Sbjct: 661 LPQHITTHFNKDLWAEHCNEYEYVDRQDEILIST--FKSL-NDNCSLQEMMPSYIIMFEP 717
Query: 652 DMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
D+SF+RQIEVYKA ++ KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 718 DISFIRQIEVYKAIVKDLQPKVYFMYYGESIEEQSHLTAIKREKDAFTKLIRENA 772
>gi|409042926|gb|EKM52409.1| hypothetical protein PHACADRAFT_149022 [Phanerochaete carnosa
HHB-10118-sp]
Length = 958
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 227/414 (54%), Gaps = 35/414 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L FH+ I+ ++ L++++ GL L +L+ +L ++ SQ ++L+++S + I
Sbjct: 4 LLSFHKSILEKIHDPSTSELLLIARGLGLRRLLCKLLQIYDSSQNLVVLVNASSEEAAAI 63
Query: 62 IHYLAPNAPLLPSEITADLPANHRHT---LYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
L P D + R + LY G + VT RI IVD+LT +PT + G
Sbjct: 64 GEELGVLGCRKPGLRLVDFETSRRDSRQDLYKKGGLISVTSRIFIVDMLTGDIPTHLITG 123
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+++L+ ++ S E FI R+ + N+ +++AF+D+P + SG + IMK L +R +
Sbjct: 124 IMLLHADRVSPTSPEAFIARLYREKNKTGFLKAFTDQPEHVTSGMSPLRVIMKELQLRTV 183
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVE 237
H++PRF +VSE L R+ V+ + V M++YM I AI++ M L E++++N ++D++
Sbjct: 184 HIYPRFHQDVSETLGRD-RTVLQLSVDMTEYMSEIHVAIVQCMSTTLSELKRSNAQLDLD 242
Query: 238 DLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL 297
DL VEN FKSFD I+RR LD +WH +G +TKQLVSDL TLR+LL L+ DA ++ Y+
Sbjct: 243 DLKVENAYFKSFDVIVRRHLDSVWHKVGPRTKQLVSDLSTLRRLLVLLLTEDAFSFQLYV 302
Query: 298 DTLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGK 348
++L + + +S W+ E++ IF YAK+R Y + +
Sbjct: 303 ESLIDANTTNEAGNTKHNQSPWMMTEAANVIFQYAKRRCYTV-----------DQKARAR 351
Query: 349 KRKLKKVDNNED--------EDGGTSSTSTKVV--LEEVLEEAPKWKVLREVLE 392
L+ D NED E GT+ +K ++ VLEE PKW ++ L+
Sbjct: 352 PAVLQTADENEDGWEAIRELEGCGTNGRRSKWPEGVQPVLEELPKWSLVSAALQ 405
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y+ +SD +L ++P +++Y P++ F R++EVYK P + ++VY + Y +S E
Sbjct: 592 VRAYSDDSDDTVLSEIQPRYVIMYEPNLEFTRRLEVYKKSTPGLGVRVYLMLYNNSCEEA 651
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
K+ +RRE AFE LI+++ M++PI
Sbjct: 652 KYLTDVRREKDAFERLIKERGSMLMPI 678
>gi|402219704|gb|EJT99777.1| hypothetical protein DACRYDRAFT_96032 [Dacryopinax sp. DJM-731 SS1]
Length = 1001
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 236/457 (51%), Gaps = 28/457 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L F +HII E L+IL+ GL L K++ ++L ++ +LL+ +SP + I
Sbjct: 4 LLPFQKHIIDEFHSPNTSELLILARGLGLRKILCTLLKIYDSPSSLVLLVGASPEEEVGI 63
Query: 62 IHYLAPNAPLLPSEITAD--LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P D +P R +Y +G + VT RIL+VD+L + +P + G+
Sbjct: 64 GEELGVMGVRRPGLRVVDYEMPRAERREMYKAGGLVSVTSRILVVDMLQRDIPVDKITGM 123
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
++L+ ++ STE+FI R+ + N +++AFS +P SGF+ +MK L I +
Sbjct: 124 VVLHAEKVSPTSTESFIVRLFRESNPSGFLKAFSGEPEFFQSGFSPLRSVMKELRISIVR 183
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVED 238
L+PRF V E L + VV++ PMS+ M I + I E M+A L E+++++ +D++D
Sbjct: 184 LYPRFHELVQESLSKRTADVVEIYQPMSESMREIHRCITECMEATLGEIKRSHTTLDLDD 243
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
LTVE F S ++R LDP+WH +G +T QLV DL LR+LL +L+ Y +T+LKYL+
Sbjct: 244 LTVEAAYFPSSSNLIRHLLDPVWHRVGPRTNQLVKDLAELRRLLRFLLAYPPITFLKYLE 303
Query: 299 TLRVSESF---------RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKK 349
++ S + +S W++ +++ + AK R Y T + + +V G +
Sbjct: 304 SIVASNTVSETGAAKVHQSPWLYMDAANSMIVTAKVRCYTLTEKAKSKGTITAAAVDGHE 363
Query: 350 RKLKKVDNNEDEDG--GTSSTSTKVV-------LEEVLEEAPKWKVLREVLEEIEEERLK 400
++D ++ +G G + KV + V EE PKW +LR VL EIEE ++
Sbjct: 364 PHDDELDVLDEWEGLQGRTKKPGKVRPKWLPEGMTPVYEELPKWDLLRRVLLEIEEIMVQ 423
Query: 401 QASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI 437
+VL+ +D +C L + +
Sbjct: 424 NP-------YPAHAPGTNLVLIMVQDHKTCALLREYL 453
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ Y +SD +L L+P I++Y PD +F+R++EVY++ +P + ++VYF+ YE ++E
Sbjct: 640 IRAYGDDSDDLLLAELQPRWIIMYEPDQAFIRRVEVYRSSHPGLAVRVYFMVYEMTSEDY 699
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
+ A RRE AF LI +++ M+ PI
Sbjct: 700 MYLASQRREKDAFAKLIEERATMLNPI 726
>gi|430812775|emb|CCJ29815.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 317
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 179/305 (58%), Gaps = 19/305 (6%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+ L + Q ++ E+ E GLVIL+ GL L ++A+ LLHS + L L N K +
Sbjct: 17 LFLSYQQVLVHEIYNE--NGLVILAKGLGLLNIVAN--LLHSYNLPGCLTLVIGANAKQE 72
Query: 61 -----IIHYLAPNAPLLPSE----ITADLPANHRH----TLYSSGQIFFVTPRILIVDLL 107
++ L + +P E I + +H+ ++Y+SG +F VT RIL+VDLL
Sbjct: 73 ELLKEMVDELGASDNEVPREEFKIINNESGNSHKRLISESIYNSGGVFSVTSRILVVDLL 132
Query: 108 TQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTE 167
T + ++G++ LN E S E FI RI + N+ YI+AFSD P A G +
Sbjct: 133 TGIIDPVKISGIVALNAEKAIETSLEAFILRIFRKNNKVGYIKAFSDSPEAFNVGLSPLS 192
Query: 168 RIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKE 227
IM++ F+RK LWPRF V V+E LE + VV++ V M++ M IQ AI+E M+ C+
Sbjct: 193 NIMRAFFLRKCFLWPRFHVLVAESLESKKVNVVELDVSMTESMKNIQYAIVECMEICISG 252
Query: 228 MRKTN--KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYL 285
++ N KVDVED ++N L KSFD ++RRQLD WH++ +KTKQL+SDL TLR +L YL
Sbjct: 253 LKSANSGKVDVEDWNLDNALHKSFDIMIRRQLDFHWHLVSQKTKQLLSDLTTLRHILHYL 312
Query: 286 VRYDA 290
+ YD
Sbjct: 313 LSYDC 317
>gi|154280641|ref|XP_001541133.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411312|gb|EDN06700.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 876
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 187/343 (54%), Gaps = 50/343 (14%)
Query: 118 GLIILNTHALT------ENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
GL ++NT T S E FI R+ + N+ +++AFSD P GF+ IM+
Sbjct: 91 GLKVINTDRATVPLRIVATSLEAFIIRLYRQFNKVGFLKAFSDSPEPFTIGFSPLANIMR 150
Query: 172 SLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+LF+RK LWPRFQV V+E LE R+ V+++ +PM+ M IQ A+LE ++A ++E++K
Sbjct: 151 NLFLRKPSLWPRFQVTVAESLEGRKKAEVIELEIPMTDKMRDIQNAVLECVEANIRELKK 210
Query: 231 TNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
N +D+ED TV++ L + FD +RRQL+ +WH + +TKQ+VSDL LR +L L+ YD
Sbjct: 211 ANSGLDIEDWTVDSALHQDFDVAIRRQLEHMWHRVTSRTKQIVSDLAVLRSILHSLLTYD 270
Query: 290 AVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
+V+++KYLDT+ S S W+F ++++ +F AK RVYR
Sbjct: 271 SVSFIKYLDTIIAMHSPPPGSTRQNYSPWLFLDAAHVLFQTAKSRVYR------------ 318
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
K+ N E + + S LE VLEE PKW VL +VL+EIE
Sbjct: 319 -----------GKISNQE---FISDTASLPTALEPVLEEQPKWSVLADVLDEIER----- 359
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKV 444
S+ + G N G +L+ C D +C Q+ + + KV
Sbjct: 360 -STYPNPVAPGGSN--GTILIMCSDGKTCYQIREYLETMRIKV 399
>gi|170036204|ref|XP_001845955.1| mei-9 [Culex quinquefasciatus]
gi|167878753|gb|EDS42136.1| mei-9 [Culex quinquefasciatus]
Length = 955
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 235/462 (50%), Gaps = 80/462 (17%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSS------- 54
+LE+ + + ++L + GL + + G++ K++ ++L + S +L+++ S
Sbjct: 1 MLEYERQMFFDVLH--SDGLTVCAKGITYEKVLQNLLKIFCDSTTLVLVVNCSDYEEKLL 58
Query: 55 -PNLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L SQ +H + NA R +Y G I F++ RIL+VDLL R+P
Sbjct: 59 TSQLDSQHVHESSTNA-------------TERERVYLLGGIQFMSTRILVVDLLKGRIPI 105
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I++ H + E+ E F R+ + N+ +I+AFS A G+ E++M++L
Sbjct: 106 ELITGIIVVKAHEIIESCQEAFALRLYRQKNKTGFIKAFSRNVEAFTYGYGHVEKVMRNL 165
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
F+R+L +WPRF + + L+ PVVV++++PMS+ M +Q IL++M+ +K ++ N+
Sbjct: 166 FVRELFIWPRFHATIQKSLKPYEPVVVELQIPMSQNMILLQANILDIMNYLVKNIKSLNR 225
Query: 234 -VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
V+++++TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAVT
Sbjct: 226 LVELQEITVENCVTKQFHKILQSQLDSIWHQLSSQTKLIVADLKVLRSLMITTLYHDAVT 285
Query: 293 YLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
+ R +E S W +S+ KIF+ K+RV+
Sbjct: 286 LYAVMKKYRSTEYALSNSGWTILDSAEKIFNICKERVF---------------------- 323
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-EEIEEE------RLKQAS 403
+ N++ D E+ PKWK L EVL +EI + ++++
Sbjct: 324 -----NQNDEFDP---------------EQCPKWKSLSEVLRKEIPTDVKETAGKIRKKE 363
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVM 445
R++ L VLV C+D +C QL + G EK +
Sbjct: 364 ERQKYL-----RQQVKVLVLCQDARTCYQLNQYLTQGPEKYL 400
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 616 ESKDSKPVPPVHFY-----ALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIK 670
E + S+P+ + + + S L+ +KP IV+YH +++ +RQIEV++A +
Sbjct: 565 EKESSRPIVFIQTFKSEINGIASLDRTLEEIKPRYIVMYHSNVTAIRQIEVFEARQQRTE 624
Query: 671 L---KVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
L +V+ + + + E Q + +RRE AFE LI K M++P
Sbjct: 625 LTRVRVFVIIHSKTVEEQSYLTSLRREKQAFELLIDTKRTMVVP 668
>gi|17933560|ref|NP_525068.1| meiotic 9 [Drosophila melanogaster]
gi|73920231|sp|Q24087.2|XPF_DROME RecName: Full=DNA repair endonuclease XPF; AltName: Full=Protein
meiotic 9
gi|7290484|gb|AAF45938.1| meiotic 9 [Drosophila melanogaster]
Length = 961
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 250/480 (52%), Gaps = 63/480 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L++ + + +L++ GL++ + GLS +++ S+L +S S G L+L+ +S + + Q
Sbjct: 45 VLLDYEKQMFLDLVEA--DGLLVCAKGLSYDRVVISILKAYSDS-GNLVLVINSSDWEEQ 101
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + P E+ + A R +Y G + F++ RIL+VDLL QR+P ++G+I
Sbjct: 102 --YYKSKIEPKYVHEVAST--ATERERVYLEGGLQFISTRILVVDLLKQRIPIELISGII 157
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +++AFS P A G++ ER M++LF++ L++
Sbjct: 158 VLRAHTIIESCQEAFALRLFRQKNKTGFVKAFSSSPEAFTIGYSHVERTMRNLFVKHLYI 217
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF +V L+ +++ VP+S+ + IQ ILE+M+ ++E+++ N+ VD+E +
Sbjct: 218 WPRFHESVRTVLQPWKIQSIEMHVPISQNITSIQSHILEIMNFLVQEIKRINRTVDMEAV 277
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + KSF +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 278 TVENCVTKSFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 337
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ NGQ
Sbjct: 338 YRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----------NGQQ--------------- 372
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-EEIEEERLKQASSREEVLLDGEEND 416
E E PKW+ L ++L +EI + + S ++
Sbjct: 373 -----------------EFEPEPCPKWQTLTDLLTKEIPGDMRRSRRSEQQ--------- 406
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
VL+ C+D +C QL+ + G + + ++ ++ + +L + +S PK
Sbjct: 407 -PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQHEVPVGKLSDNYAKESQTRSAPPKN 465
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 576 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 635
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 636 EKAAFEFIIDTKSKMVIP 653
>gi|195133562|ref|XP_002011208.1| GI16132 [Drosophila mojavensis]
gi|193907183|gb|EDW06050.1| GI16132 [Drosophila mojavensis]
Length = 966
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 233/450 (51%), Gaps = 59/450 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + +L+ GL++ + GLS +++ +L ++S + G LLL+ +S + + Q
Sbjct: 50 LLEYEKQMFLDLVHA--DGLLVAAKGLSYERVLLHILKVYSDA-GNLLLVINSADWEEQ- 105
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+Y + E+ A R +Y G I F++ RIL+VDLL QR+P + G+I+
Sbjct: 106 -YYKSKLDAKYVHEVANT--ATERERVYLEGGIQFISTRILVVDLLKQRIPIELITGIIV 162
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
L H++ E+ E F R+ + N+ +I+AFS P A G++ ER M++LF+++L++W
Sbjct: 163 LRAHSIIESCQEAFALRLYRQRNKTGFIKAFSSSPEAFTIGYSHIERTMRNLFVKQLYIW 222
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
PRF V L +++ VP+S + IQ IL++M+ ++E+++ N+ VD+E +T
Sbjct: 223 PRFHATVRAALHPWQAQTIELHVPLSARVIAIQTHILDIMNFLVREIKRINRSVDMEAVT 282
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
VEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ +
Sbjct: 283 VENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSSYALIKRY 342
Query: 301 RVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
R +E S W +++ +IF +K+RVY NGQ N
Sbjct: 343 RSTEYAISNSGWTLMDAAEQIFVLSKQRVY----------NGQ----------------N 376
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
E E E PKW+ L E+L + + SR + D
Sbjct: 377 EFEP----------------EPCPKWQALSELL----TQDIPGDMSRRR---GADHLDPP 413
Query: 419 IVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + GS + + ++
Sbjct: 414 KVLILCQDARACYQLKQYLTQGSARYLLQQ 443
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +++Y+ +++ +RQ+EV++A P ++K+YFL + + E Q + +RR
Sbjct: 578 MLEQLQPHYVIMYNTNVTAIRQLEVFEARRRLPPDDRMKIYFLIHARTVEEQSYLTSLRR 637
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 638 EKSAFELIIETKSKMVIP 655
>gi|25009805|gb|AAN71074.1| AT15210p [Drosophila melanogaster]
Length = 961
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 250/480 (52%), Gaps = 63/480 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L++ + + +L++ GL++ + GLS +++ S+L +S S G L+L+ +S + + Q
Sbjct: 45 VLLDYEKQMFLDLVEA--DGLLVCAKGLSYDRVVISILKAYSDS-GNLVLVINSSDWEEQ 101
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + P E+ + A R +Y G + F++ RIL+VDLL QR+P ++G+I
Sbjct: 102 --YYKSKIEPKYVHEVAST--ATERERVYLEGGLQFISTRILVVDLLKQRIPIELISGII 157
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +++AFS P A G++ ER M++LF++ L++
Sbjct: 158 VLRAHTIIESCQEAFALRLFRQKNKTGFVKAFSSSPEAFTIGYSHVERTMRNLFVKHLYI 217
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF +V L+ +++ VP+S+ + IQ ILE+M+ ++E+++ N+ VD+E +
Sbjct: 218 WPRFHESVRTVLQPWKIQSIEMHVPISQNITSIQSHILEIMNFLVQEIKRINRTVDMEAV 277
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 278 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 337
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ NGQ
Sbjct: 338 YRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----------NGQQ--------------- 372
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-EEIEEERLKQASSREEVLLDGEEND 416
E E PKW+ L ++L +EI + + S ++
Sbjct: 373 -----------------EFEPEPCPKWQTLTDLLTKEIPGDMRRSRRSEQQ--------- 406
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
VL+ C+D +C QL+ + G + + ++ ++ + +L + +S PK
Sbjct: 407 -PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQHEVPVGKLSDNYAKESQTRSAPPKN 465
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 576 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 635
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 636 EKAAFEFIIDTKSKMVIP 653
>gi|195477160|ref|XP_002100113.1| GE16862 [Drosophila yakuba]
gi|194187637|gb|EDX01221.1| GE16862 [Drosophila yakuba]
Length = 965
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 241/452 (53%), Gaps = 64/452 (14%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L++ + + +L++ GL++ + GL+ +++ S+L +S S G L+L+ +S + + Q
Sbjct: 51 ILLDYEKQMFLDLVEA--DGLLVCAKGLNYDRVVISILKAYSDS-GNLVLVINSSDWEEQ 107
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + P E+ AN R +Y G + F++ RIL+VDLL QR+P ++G+I
Sbjct: 108 --YYKSKMEPKYVHEVANT--ANERERVYLEGGLQFISTRILVVDLLKQRIPIELISGII 163
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
++ H + E+ E F R+ + N+ +++AFS P A G++ ER M++LF+++L++
Sbjct: 164 VMRAHTIIESCQEAFALRLYRQKNKTGFVKAFSSSPEAFTIGYSHVERTMRNLFVKQLYI 223
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF +V L+ +++ VP+S+ + IQ ILE+M+ ++E+++ N+ VD+E +
Sbjct: 224 WPRFHESVRAVLQPWKIQSIEMHVPISQSITSIQSHILEIMNFLVQEIKRINRTVDMEAV 283
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 284 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 343
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV +NGQ
Sbjct: 344 YRSTEYALSNSGWTLLDAAEQIFKLSRQRV----------VNGQQ--------------- 378
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-EEIEEERLKQASSREEVLLDGEEND 416
E E PKW+ L ++L +EI + Q S R E
Sbjct: 379 -----------------EFEPEPCPKWQTLTDLLTKEIPGD--MQRSRRSE--------- 410
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + G + + ++
Sbjct: 411 QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 442
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 580 MLEQLQPHYVVMYNMNVTVIRQLEVFEARRRLPPAERMKVYFLIHARTVEEQAYLTSLRR 639
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 640 EKAAFELIIDTKSKMVIP 657
>gi|198467671|ref|XP_001354472.2| GA17620 [Drosophila pseudoobscura pseudoobscura]
gi|198149354|gb|EAL31525.2| GA17620 [Drosophila pseudoobscura pseudoobscura]
Length = 973
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 229/455 (50%), Gaps = 73/455 (16%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++LE+ + + +L+ GL++ + GLS + + +L +S + G L+L+ + + + Q
Sbjct: 58 VLLEYEKQMFLDLVHA--DGLLVCAKGLSYERALVHILKAYSDA-GNLILIINGSDWEEQ 114
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + E+ A R +Y G + F++ RIL+VDLL QR+P + G++
Sbjct: 115 --YYKSKMEAKYVHEVANT--ATERERVYLEGGLQFISTRILVVDLLKQRIPIELITGIV 170
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +++AFS+ P A G++ ER M++LF+++L++
Sbjct: 171 VLRAHTIIESCQEAFALRLYRQRNKTGFVKAFSNSPEAFTIGYSHIERTMRNLFVKQLYI 230
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V L+ +++ VP+S++M IQ IL++M+ ++E+++ N+ VD+E +
Sbjct: 231 WPRFHATVRGALKPWQAQTIELHVPLSQHMTSIQTHILDIMNFLVREIKRINRNVDMEAV 290
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ +
Sbjct: 291 TVENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYALMKR 350
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ ++F +K+RVY NGQ
Sbjct: 351 YRSTEYALSNSGWTLLDAAEQVFKLSKQRVY----------NGQQ--------------- 385
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E PKW+ L E+L + D H
Sbjct: 386 -----------------EFEPEPCPKWQALTELLTQ-----------------DISHKSH 411
Query: 418 GI----VLVACKDECSCMQLEDCIRNGSEKVMREE 448
G VL+ C+D +C QL+ + G + + ++
Sbjct: 412 GQEQPKVLILCQDARTCYQLKQYLTQGGPRFLLQQ 446
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
IL+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 588 ILEKLQPHHVVMYNTNVTAIRQLEVFEARRCLPPAERMKVYFLIHARTVEEQSYLTSLRR 647
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M++P
Sbjct: 648 EKAAFELIIETKSKMVVP 665
>gi|195162439|ref|XP_002022063.1| GL14183 [Drosophila persimilis]
gi|194103961|gb|EDW26004.1| GL14183 [Drosophila persimilis]
Length = 973
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 229/455 (50%), Gaps = 73/455 (16%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++LE+ + + +L+ GL++ + GLS + + +L +S + G L+L+ + + + Q
Sbjct: 58 VLLEYEKQMFLDLVHA--DGLLVCAKGLSYERALVHILKAYSDA-GNLILIINGSDWEEQ 114
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + E+ A R +Y G + F++ RIL+VDLL QR+P + G++
Sbjct: 115 --YYKSKMEAKYVHEVANT--ATERERVYLEGGLQFISTRILVVDLLKQRIPIELITGIV 170
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +++AFS+ P A G++ ER M++LF+++L++
Sbjct: 171 VLRAHTIIESCQEAFALRLYRQRNKTGFVKAFSNSPEAFTIGYSHIERTMRNLFVKQLYI 230
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF V L+ +++ VP+S++M IQ IL++M+ ++E+++ N+ VD+E +
Sbjct: 231 WPRFHATVRGALKPWQAQTIELHVPLSQHMTSIQTHILDIMNFLVREIKRINRNVDMEAV 290
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ +
Sbjct: 291 TVENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYALMKR 350
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ ++F +K+RVY NGQ
Sbjct: 351 YRSTEYALSNSGWTLLDAAEQVFKLSKQRVY----------NGQQ--------------- 385
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E PKW+ L E+L + D H
Sbjct: 386 -----------------EFEPEPCPKWQALTELLTQ-----------------DISHKSH 411
Query: 418 GI----VLVACKDECSCMQLEDCIRNGSEKVMREE 448
G VL+ C+D +C QL+ + G + + ++
Sbjct: 412 GQEQPKVLILCQDARTCYQLKQYLTQGGPRFLLQQ 446
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
IL+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 588 ILEKLQPHHVVMYNTNVTAIRQLEVFEARRCLPPAERMKVYFLIHARTVEEQSYLTSLRR 647
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M++P
Sbjct: 648 EKAAFELIIETKSKMVVP 665
>gi|157126764|ref|XP_001654742.1| DNA repair endonuclease xp-f / mei-9 / rad1 [Aedes aegypti]
gi|108882528|gb|EAT46753.1| AAEL002098-PA, partial [Aedes aegypti]
Length = 944
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 236/462 (51%), Gaps = 80/462 (17%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSS------- 54
+LE+ + + +LL + GLV+ + G+S K++ ++L + + +L+++ S
Sbjct: 53 MLEYERQMFFDLLH--SDGLVVCAKGISYEKVLLNLLKIFCDATTLVLVVNCSDYEERLY 110
Query: 55 -PNLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L+ + IH + NA R +Y G I F++ R+L+VDLL R+P
Sbjct: 111 TSQLEERHIHESSTNAA-------------ERERVYLLGGIQFISTRVLVVDLLKNRIPI 157
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+ ++ H + E+ E F R+ + N+ +I+AFS A G+ E++M++L
Sbjct: 158 ELITGIFVVKAHEIIESCQEAFALRLYRQRNKSGFIKAFSKNVEAFTYGYGHVEKVMRNL 217
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
F+++L +WPRF + + L+ P+VV++++PMS+ M +Q IL++M+ +K+++ N+
Sbjct: 218 FVKELFIWPRFHATIQKSLKPWEPIVVEMQIPMSQNMILLQANILDIMNHLVKDIKSLNR 277
Query: 234 -VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
V+++++TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAVT
Sbjct: 278 NVELQEVTVENCVTKKFHKILQAQLDTIWHQLSSQTKLIVADLKVLRSLMISTIYHDAVT 337
Query: 293 YLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
+ R +E S W +S+ K+F+ AK+RV F ++D E
Sbjct: 338 LYATMRKYRSTEYALSNSGWTICDSAEKMFNIAKERV--FNKNDEFE------------- 382
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE-----IEE--ERLKQAS 403
E PKWK L EVL + I+E +++++
Sbjct: 383 ---------------------------PELCPKWKALTEVLRQEIPADIKETAKKMRKKD 415
Query: 404 SREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVM 445
R + L + VL+ C+D +C QL + G EK +
Sbjct: 416 ERHKYL-----HQQVKVLILCQDARTCYQLNQYLTQGPEKYL 452
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPS---IKLKVYFLFYEDSTEVQKFKAGIRRE 694
L+ +KP IV+YH +++ +RQIEVY+A +++V+ + + + E Q + +RRE
Sbjct: 595 LEEIKPRYIVLYHSNVTAIRQIEVYEARQQRQELARVRVFVIIHSKTVEEQSYLTSLRRE 654
Query: 695 NGAFESLIRQKSFMMIP 711
AFE LI K M++P
Sbjct: 655 KQAFELLIDTKRTMVVP 671
>gi|254577019|ref|XP_002494496.1| ZYRO0A02860p [Zygosaccharomyces rouxii]
gi|238937385|emb|CAR25563.1| ZYRO0A02860p [Zygosaccharomyces rouxii]
Length = 1053
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 196/752 (26%), Positives = 334/752 (44%), Gaps = 138/752 (18%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS--------PSQGTLLLLSSS 54
L F Q ++ L + LVIL G+ + ++A++L + P + ++++++S
Sbjct: 93 LTFQQQVVENTLV-TDDPLVILGKGIGIISIVANLLFTLATPTRINGQPKRSFVIVMNAS 151
Query: 55 P--NLKS----QIIHYLAPNAPLLPSE--------------ITADLP-ANHRHTLYSSGQ 93
P NL+ Q + +L+ + + E I A+ A+ R LY+SG
Sbjct: 152 PGDNLRISEELQELSWLSSCSEDIQGEDNDIDEDSQRPFHVINAESQNADKRQKLYNSGG 211
Query: 94 IFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFS 153
IF VT RILIVDLL+ L S + G+++LN L S E+FI I +S N+ +I+AFS
Sbjct: 212 IFSVTSRILIVDLLSGLLHPSRITGIVVLNVEKLKSFSNESFILEIYRSKNKWGFIKAFS 271
Query: 154 DKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER--EPPV--VVDVRVPMSKY 209
+ P + V+ F+ R +K L ++ + LWPRF+V +S+ L P + VV+V+V +
Sbjct: 272 ESPESFVTQFSPLMRKLKELRLKNVTLWPRFRVEISQCLNNAVNPQINKVVEVKVSQTNS 331
Query: 210 MGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKT 268
M IQ ++E + C+ EM RK ++ +E +EN L +F + + + P WH + ++
Sbjct: 332 MSQIQFGLMECLKKCIAEMNRKNPELVLETWNIENALDPTFVKSIDAVMVPNWHRISYES 391
Query: 269 KQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSESFR---SVWIFAESSYKIFD 321
KQL+ D++ L+ LL LV DAV + + LD + S S + S W+ A+ S +
Sbjct: 392 KQLIKDIRFLKNLLKLLVSGDAVDFYEELQLSLDANKPSISRKYSESPWLMADESQMVIS 451
Query: 322 YAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEA 381
YAKKR+Y SDG E VLEE
Sbjct: 452 YAKKRIY----SDG---------------------------------------EYVLEEM 468
Query: 382 PKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGS 441
PKW+ L ++E+I +R + S G L+ C + QL +
Sbjct: 469 PKWEQLISIMEDISYQRAYKDVS-------------GPTLIVCSSYTTASQLARVLSQAD 515
Query: 442 EKVMREEWEKYLLSKVQL-----RSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASS 496
K + + + +L K+QL +T K+ + +EP L+ A A+ +
Sbjct: 516 RK---DGFRRSMLRKLQLYKERREESKTLVKEIREREPDAMPELNVSA--AFAKEQVITR 570
Query: 497 VSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKD 556
+ A +AA +++N G +D ++ Y K G + A P + +D
Sbjct: 571 RRRTRGAAAMAAVERLKNAGTGEDIESVIDDYNIKEELEPEGLLEMADNEATAPTTEYED 630
Query: 557 SKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAE 616
+ D H+ + KE+ +R+
Sbjct: 631 EDDFGEKLFHDMS--------------HNAIT-------------KEIWDQRTQYFQFVH 663
Query: 617 SKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFL 676
D + +A +D L + P I++Y PD++F+R++E+++A + + V F+
Sbjct: 664 RGDQI---IIEIFANITDDSYLQEIMPSNIIMYEPDLTFIRRVEIHRAIHREMPPNVCFM 720
Query: 677 FYEDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
+Y +S E Q IR+E AF LIR+ S +
Sbjct: 721 YYSNSVEEQGHLVSIRKEKDAFTKLIRENSML 752
>gi|195047187|ref|XP_001992289.1| GH24669 [Drosophila grimshawi]
gi|193893130|gb|EDV91996.1| GH24669 [Drosophila grimshawi]
Length = 988
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 241/481 (50%), Gaps = 80/481 (16%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSS------- 54
+LE+ + + +L+ GL++ + GL +++ +L ++S + LL+++SS
Sbjct: 59 LLEYEKQMFLDLVH--TDGLLVSAKGLGYERVLMHILKVYSDTGNLLLVVNSSDWEEQYY 116
Query: 55 -PNLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
L ++ +H +A A R +Y G + F++ RIL+VDLL QR+P
Sbjct: 117 KSKLDAKYVHEVANTA-------------TERERVYLEGGLQFISTRILVVDLLKQRIPI 163
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ G+I+L +H++ E+ E F R+ + N+ +I+AFS P A G+A ER M++L
Sbjct: 164 ELITGIIVLRSHSIIESCQEAFALRLFRQRNKTGFIKAFSSSPEAFTIGYAHIERTMRNL 223
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
F++ L++WPRF V L +++ VP++ M +Q IL++M+ ++E+++ N+
Sbjct: 224 FVKHLYIWPRFHATVRSALHPWQAQTIELHVPLTTRMSSLQTHILDIMNFLVREIKRINR 283
Query: 234 -VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
VD+E +TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+
Sbjct: 284 TVDMEAVTVENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVS 343
Query: 293 YLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
+ R +E S W +++ +IF +K+RVY N Q
Sbjct: 344 SYALIKRYRSTEYAISNSGWTLLDAAEQIFTLSKQRVY----------NAQ--------- 384
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLL 410
NE E E+ PKW+ L E+L + +++ + +
Sbjct: 385 -------NEFEP----------------EQCPKWQPLSELLTKDIPGDMRRRRGADHL-- 419
Query: 411 DGEENDHGIVLVACKDECSCMQLEDCIRNGS-----EKVMREEWEKYLLSKVQLRSVQTS 465
+ VL+ C+D +C QL+ + GS ++ MR E LS+ + QT+
Sbjct: 420 -----EPPKVLILCQDARTCYQLKQYLTQGSARYLLQQAMRHEVLVGKLSEALAKDSQTT 474
Query: 466 S 466
+
Sbjct: 475 A 475
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+LD L+P +V+Y+ +++ +RQ+EV++A P+ ++++YFL + + E Q + +RR
Sbjct: 595 MLDQLQPHYVVMYNTNVTAIRQLEVFEARRRLPPAERMRIYFLIHARTVEEQSYLTSLRR 654
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 655 EKSAFELIIDTKSKMVIP 672
>gi|194888165|ref|XP_001976868.1| GG18547 [Drosophila erecta]
gi|190648517|gb|EDV45795.1| GG18547 [Drosophila erecta]
Length = 965
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 236/451 (52%), Gaps = 62/451 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L++ + + +L++ GL++ + GL +++ S+L +S S G L+L+ +S + + Q
Sbjct: 51 VLLDYEKQMFLDLVEA--DGLLVCAKGLCYDRVVISILKAYSDS-GNLVLVINSSDWEEQ 107
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + P E+ A R +Y G + F++ RIL+VDLL QR+P ++G+I
Sbjct: 108 --YYKSKMEPKYVHEVANT--ATERERVYLEGGLQFISTRILVVDLLKQRIPIELISGII 163
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +++AFS P A G++ ER M++LF++ L++
Sbjct: 164 VLRAHTIIESCQEAFALRLFRQKNKTGFVKAFSSSPEAFTIGYSHVERTMRNLFVKHLYI 223
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF +V L+ +++ VP+S+ M IQ ILE+M+ ++E+++ N+ VD+E +
Sbjct: 224 WPRFHESVRAVLQPWKIQSIEMHVPISQSMTSIQSHILEIMNFLVQEIKRINRTVDMEAV 283
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 284 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 343
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ D
Sbjct: 344 YRSTEYALSNSGWTLLDAAEQIFKRSRQRVFN--------------------------DQ 377
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E E PKW+ L ++L + ++++ E+
Sbjct: 378 QEFEP----------------EACPKWQTLTDLLTKEIPGDMRRSRRSEQ---------- 411
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + G + + ++
Sbjct: 412 PKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 442
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 580 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 639
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 640 EKAAFEFIIETKSRMVIP 657
>gi|195397423|ref|XP_002057328.1| GJ16410 [Drosophila virilis]
gi|194147095|gb|EDW62814.1| GJ16410 [Drosophila virilis]
Length = 991
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 231/450 (51%), Gaps = 61/450 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + +L+ GL++ + GLS +++ ++L ++S + G LLL+ + + + Q
Sbjct: 67 LLEYEKQMFLDLVHA--DGLLVSAKGLSYERVLLNILKVYSDA-GNLLLVINCADWEEQ- 122
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+Y + E+ A R +Y G + F++ RIL+VDLL QR+P + G+I+
Sbjct: 123 -YYKSKLDAKYVHEVAN--TATERERVYLEGGLQFISTRILVVDLLKQRIPIELITGIIV 179
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
L H + E+ E F R+ + N+ +I+AFS P A G+A ER M++LF+++L++W
Sbjct: 180 LRAHTIIESCQEAFALRLYRQRNKTGFIKAFSCSPEAFTIGYAHIERTMRNLFVKQLYIW 239
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
PRF V L +++ VP+S M IQ IL++M+ ++E+++ N+ VD+E +T
Sbjct: 240 PRFHATVRAALHPWQAQTIELHVPLSTRMCSIQTHILDIMNFLVREIKRINRTVDMEAVT 299
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
VEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ +
Sbjct: 300 VENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSSYALIKRY 359
Query: 301 RVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
R +E S W +S+ +IF +K+RVY N Q N
Sbjct: 360 RGTEYAISNSGWTLLDSAEQIFMLSKQRVY----------NAQ----------------N 393
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
E E E PKW+ L E+L + +++ R +
Sbjct: 394 EFEP----------------EPCPKWQALSELLTQDIPGDMQRRCDRLQ---------PP 428
Query: 419 IVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + GS + + ++
Sbjct: 429 KVLILCQDARTCYQLKQYLTQGSARFLLQQ 458
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIK---LKVYFLFYEDSTEVQKFKAGIRR 693
+LD L+P +++Y+ +++ +RQ+EV++A +K+YFL + + E Q + +RR
Sbjct: 600 MLDQLQPHYVIMYNTNVTAIRQLEVFEARRRRPPAERMKIYFLIHARTVEEQSYLTSLRR 659
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 660 EKSAFELIIDTKSKMVIP 677
>gi|924919|gb|AAC46917.1| MEI-9 [Drosophila melanogaster]
gi|1585596|prf||2201389A mei-9 gene
Length = 926
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 249/480 (51%), Gaps = 63/480 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++L++ + + +L++ GL++ + GLS +++ S+L +S S G L+L+ +S + + Q
Sbjct: 2 VLLDYEKQMFLDLVEA--DGLLVCAKGLSYDRVVISILKAYSDS-GNLVLVINSSDWEEQ 58
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + P E + A R +Y G + F++ RIL+VDLL QR+P ++G+I
Sbjct: 59 --YYKSKIEPKYVHEGAST--ATERERVYLEGGLQFISTRILVVDLLKQRIPIELISGII 114
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +++AFS P A G++ ER M++LF++ L++
Sbjct: 115 VLRAHTIIESCQEAFALRLFRQKNKTGFVKAFSSSPEAFTIGYSHVERTMRNLFVKHLYI 174
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF +V L+ +++ VP+S+ + IQ ILE+M+ ++E+++ N+ VD+E +
Sbjct: 175 WPRFHESVRTVLQPWKIQSIEMHVPISQNITSIQSHILEIMNFLVQEIKRINRTVDMEAV 234
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 235 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRTLMISTMYHDAVSAYAFMKR 294
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ NGQ
Sbjct: 295 YRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----------NGQQ--------------- 329
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-EEIEEERLKQASSREEVLLDGEEND 416
E E PKW+ L ++L +EI + + S ++
Sbjct: 330 -----------------EFEPEPCPKWQTLTDLLTKEIPGDMRRSRRSEQQ--------- 363
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKG 476
VL+ C+D +C QL+ + G + + ++ ++ + +L + +S PK
Sbjct: 364 -PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQHEVPVGKLSDNYAKESQTRSAPPKN 422
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 533 MLEQLQPHYVVMYNMNVTPIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 592
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 593 EKAAFEFIIDTKSKMVIP 610
>gi|189237991|ref|XP_001812786.1| PREDICTED: similar to DNA repair endonuclease xp-f / mei-9 / rad1
[Tribolium castaneum]
gi|270008119|gb|EFA04567.1| meiotic 9 [Tribolium castaneum]
Length = 870
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 231/447 (51%), Gaps = 62/447 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LEF I ++L + GLV+ + GL+L ++ ++ ++S +++L++S +
Sbjct: 23 MLEFETQIFLDILHK--DGLVVAAKGLNLDLVLLNLFKVYSDPGNLVMVLNASEAEEKFF 80
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
I+ + T ++ R Y SG I F+T RIL+VDLL R+P + G +I
Sbjct: 81 INKIKDGNV---HSTTFNVSITDREDAYLSGGIHFITTRILVVDLLKNRVPIDKITGFVI 137
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
L H + E+ E F R+ + N+ +I+AFS+ + GF ERIM+++F+++L++W
Sbjct: 138 LRAHKVLESCQEAFALRLYRQSNKTGFIKAFSNSVQSFTMGFGHVERIMRTIFVKELYIW 197
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
PRF V + L++ P V+++ +P+S+ M +Q ILE+M+ +KE+++ NK V+++++T
Sbjct: 198 PRFHSMVIQSLKQYEPQVIELHIPISENMSKMQTYILELMNITVKELKRINKTVELQEIT 257
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
VEN L K F + L+ QLD IW+ L +K+KQLV+DLKTLR L+ + D VT+ L +
Sbjct: 258 VENCLTKKFQKNLQMQLDGIWNQLSEKSKQLVADLKTLRHLIITMHYADPVTFYSTLSSY 317
Query: 301 RVSESFRS-VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNE 359
R E ++ W+ E + +F A ++ + ELN
Sbjct: 318 RTMEYAQTATWVLTEPAELLFSQASSLIF----TGDKELNP------------------- 354
Query: 360 DEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLE-EIEEERLKQASSREEVLLDGEENDHG 418
E PKWK L E+L+ EI E +++ +RE
Sbjct: 355 -------------------EFCPKWKSLLELLKVEIPHE-IEKMKTRE-----------N 383
Query: 419 IVLVACKDECSCMQLEDCIRNGSEKVM 445
+L+ C D+ +C QL + +G K +
Sbjct: 384 KILILCSDQKTCYQLSQLLTHGPHKYL 410
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 565 IEDKPEIS-----GSGNEGPADEIHSGVV---GYSGGMLETAFVEKEVQWKRSLKTDTAE 616
IE+ PE + N ++EI S V + G E+ +W+ T +
Sbjct: 434 IEEGPEAAKKPKLDESNVNESEEIKSSYVLTMSQTPGDDSQYIFEQCEEWENMNITQICQ 493
Query: 617 SKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENP-SIKLKVYF 675
S + V F + Q L+ + P I++YH ++ +R+IE+++A LK YF
Sbjct: 494 SLTAPTVLIQTFKGTPNLQRTLEEINPSFIIMYHSSITAIREIEMFEAHRKRETSLKTYF 553
Query: 676 LFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
L + ++ E Q + +RRE AFE LI KS M++P DQ
Sbjct: 554 LIHGETVEEQSYLTSLRREKEAFEYLIETKSKMVVPEDQ 592
>gi|358060432|dbj|GAA93837.1| hypothetical protein E5Q_00483 [Mixia osmundae IAM 14324]
Length = 992
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 207/772 (26%), Positives = 346/772 (44%), Gaps = 125/772 (16%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGT--LLLLSSSP--NL 57
+L F + II ELL+ N GL+IL+ GL L +++ L + GT L+LL + P +
Sbjct: 3 LLPFQRQIIEELLEPANDGLLILARGLGLRRIVCRFLKEFNERSGTPQLILLLNLPEGHQ 62
Query: 58 KSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
+ I LA + IT PA R LY G I VT ++ DL+ +P +
Sbjct: 63 EDGIKDELAGLGGIDLETITGTTPALERAKLYRRGGILSVTDTVMNGDLMDDTVPIELCS 122
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
G++I N H + + S FI R + N+ +++AFSD+P G A E +K+L IR+
Sbjct: 123 GIVIWNAHEVRKPSHIEFIVRKFREKNKVGFLKAFSDQPELFTHGIAPLEGTLKALKIRQ 182
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDV 236
+ L+PRF + ++LE + ++ V +S+ M IQ+AI E M A + E+++++ +D+
Sbjct: 183 VFLYPRFHELIKKDLETRKADLAELCVGLSEAMQEIQQAIFECMTATINELKRSHLTIDI 242
Query: 237 EDLTVENGLFKSFDEILRRQLDPIWHILGK---KTKQLVSDLKTLRKLLDYLVRYDAVTY 293
E T+E+ L FDE+ R Q ++ GK T L+ D++TLR LL L+ D+V++
Sbjct: 243 ESFTLEHALVPRFDEVARAQ---VYSSGGKSSGNTAGLLDDIRTLRGLLLCLLTEDSVSF 299
Query: 294 LKYLDTLRVSE------SFR---SVWIFAESSYKIFDYAKKRV-YRFTRSDGVELNGQSK 343
L+ LD +++++ + R S W+ ++ IF A++RV R S + +S
Sbjct: 300 LRRLDMIKMTKIRNPAGNVRQNVSPWLTLPAADLIFSIAERRVAVRHAASAQPAVTRKSP 359
Query: 344 S------VTGKKRK-LKKVDNNEDEDGGTSSTSTKVV---------------------LE 375
S +T ++ + L+ D E + S S E
Sbjct: 360 SPDEFDGITAEEEEALRLYDPAPGESMQSMSASGLTTRPANGLPDLKDASKPWWIPKDTE 419
Query: 376 EVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEEN----DHGIVLVACKDECSCM 431
+LE PKW+VL + L E E +L D + +LV CK+ +
Sbjct: 420 LILEVQPKWEVLAQTLAE-----------SENLLFDADPQPDIASTDTILVMCKNSQTSS 468
Query: 432 QLE---------DCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDG 482
L+ D +++VM ++ YL K + ++ + +KK +
Sbjct: 469 LLKRYVTADRDADTSLPMADQVMLTLYQHYLRDKKRANNITRNLRKKPAN---------- 518
Query: 483 VAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRN 542
A N S S+ + A L Q K + Y P R R
Sbjct: 519 ----GTAANDHGSVDSRPKTSAAL--------QRKQE--------YKRGAPANKR--RRT 556
Query: 543 RNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEK 602
R G A + DS + A P I+ L+ A +
Sbjct: 557 RGGAAVAVPRGDTDSVIDLDAEAAALPTIAAKD-------------------LDPALADS 597
Query: 603 EVQ-WKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEV 661
++ + + D D + + + YA E D +L+ L P I++Y P++SFVRQIE
Sbjct: 598 MIEDFDKLAFDDYFGLIDREDIVIIRPYAGEDDTIMLEELMPKFIIMYEPNLSFVRQIEA 657
Query: 662 YKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
Y+ +P + ++VY++ Y+ S E + IR E AFE LIR+++ M+IP++
Sbjct: 658 YRNSHPGVNIRVYWMTYDTSAEESLYLTEIRAEKDAFERLIRERASMVIPLE 709
>gi|50291381|ref|XP_448123.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527434|emb|CAG61074.1| unnamed protein product [Candida glabrata]
Length = 1071
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 190/772 (24%), Positives = 345/772 (44%), Gaps = 158/772 (20%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPS-------QGTLLLLS 52
+ L F Q II ++L + LVI+ GL + +++++L +L +P+ + +++L+
Sbjct: 94 LSLPFQQQIIEDVLA-TDDPLVIMGKGLGMVPIVSNLLHVLATPTVIKGQLKRSLVVVLN 152
Query: 53 SSPNLKSQI------IHYL-------APNAPL-----------LPSEITAD-LPANHRHT 87
++ + QI +++L P A + + +E+TA+ L R
Sbjct: 153 ATGSENRQISEELEELNWLVNADDNAGPFASIDEDDDDDPKYSIFNEVTAETLSVEKRRQ 212
Query: 88 LYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA 147
LY G I VT RI IVDLL+ + + + G ++LN L S E+FI I +S NR
Sbjct: 213 LYLKGGIVSVTSRIFIVDLLSGTIHPNRITGFVVLNADNLRNFSNESFILEIYRSKNRWG 272
Query: 148 YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPV--------V 199
+I+AFS+ P + F+ MK L ++ + LWPRF++ VS L E + V
Sbjct: 273 FIKAFSNNPESFSMSFSPLINKMKELHLKNVLLWPRFRIEVSASLNNEKVINGQIRSDKV 332
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLD 258
++VR+ + M IQ ++ + C++E+ RK ++ +E +EN L +F + +
Sbjct: 333 IEVRINPTNAMSQIQFGLMGCLKKCIEELTRKNTEISIEYWNIENILDANFIRSIDAIMV 392
Query: 259 PIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD-TLRVSES------FRSVWI 311
P WH + ++KQLV D+K L++LL L DAV + + + +L ++ S W+
Sbjct: 393 PNWHRISFESKQLVKDIKYLKRLLKMLYSSDAVDFYEEVQLSLEANKPSLGRKYSESPWL 452
Query: 312 FAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTK 371
AE S + YA++R++ NGQ
Sbjct: 453 MAEESQLVISYARQRIF----------NGQ------------------------------ 472
Query: 372 VVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCM 431
+ VLEE PKW L +L++I E+ + N G L+ C + + +
Sbjct: 473 ---DYVLEELPKWDQLLSILDDIAYEKTTR-------------NIEGSTLIVCNNNTTVL 516
Query: 432 QLEDCIRN-----GSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPV 486
QL I G +M + E Y + + + + + KK+++ EP+
Sbjct: 517 QLRRVISKYDNEFGMRNIMLSKLEWYKMKREERKRIVRDFKKEET-EPE----------- 564
Query: 487 KIAQNAEASSVSKQE---------HDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGR 537
Q + +SS +K+E A +AA K+ + G D ++ Y +G
Sbjct: 565 --VQLSVSSSFAKEEVVTKRRRTRGAAAVAAVQKLHSAGSGIDIEDVIENYDFNAEAQGT 622
Query: 538 GKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLET 597
K S + D + + +E++ +EG D+ + + E
Sbjct: 623 MK------------STSDDLIEDYR--VEEQEGYYNVEDEGEYDDFENSTLFKEFMKREA 668
Query: 598 AFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVR 657
+++ +Q K+ + E D + + ++ D + + + P I++Y PD++F+R
Sbjct: 669 DLIDQTMQKKK----ENFEYLDRQDQLLIETFSRIGDDVLFEEMMPSYIIMYEPDLAFIR 724
Query: 658 QIEVYKA---ENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
++E+++A ENP K++FL+Y DS E Q I++E AF LIR+ +
Sbjct: 725 KVEIFRALKRENPP---KIFFLYYGDSAEEQTHLLSIKKEKDAFSKLIRENA 773
>gi|367000079|ref|XP_003684775.1| hypothetical protein TPHA_0C01850 [Tetrapisispora phaffii CBS 4417]
gi|357523072|emb|CCE62341.1| hypothetical protein TPHA_0C01850 [Tetrapisispora phaffii CBS 4417]
Length = 1055
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 191/750 (25%), Positives = 333/750 (44%), Gaps = 144/750 (19%)
Query: 3 LEFHQHIIAELL--QEPNGGLVILSSGLSLPKLIASVL-LLHSPSQ-------GTLLLLS 52
L + Q+I+ +L ++P LVI+ GL + ++A++L +L +P++ +L+L+
Sbjct: 101 LTYQQNIVEHVLISEDP---LVIMGKGLCMASIVANLLFILVTPTKIGNVLKRSLVLVLN 157
Query: 53 SSPNLKSQI------IHYLAPNA-----------PLLPSEITAD-LPANHRHTLYSSGQI 94
+SPN I +++L+ + P + +TAD L ++R LY SG I
Sbjct: 158 ASPNDNKHIEEELQELYWLSQDEDFEINDDLKENPRSFNVVTADSLSVDNRRKLYLSGGI 217
Query: 95 FFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSD 154
VT RILI DLL+ + + + GL++LN + S E+FI I ++ N+ +I+AFS+
Sbjct: 218 ISVTSRILIADLLSGVIHPNRITGLVVLNVEKIRHLSNESFIVEIYRTKNKWGFIKAFSE 277
Query: 155 KPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS-----EELEREPPVVVDVRVPMSKY 209
P + V F+ R +K L ++ + LWPRF+ VS +E + V+++++ M+
Sbjct: 278 VPESFVMEFSPLLRKLKDLRLKNVLLWPRFRFEVSSCLNPKEGQYNKGKVIEIKIDMTDS 337
Query: 210 MGGIQKAILEVMDACLKEMRKTNKVDVED-LTVENGLFKSFDEILRRQLDPIWHILGKKT 268
M IQ ++E + C+ E+ + N D ++EN L +F + + + P WH + +
Sbjct: 338 MLKIQFGLMECLKKCIAELNRKNPELARDWWSIENALDINFQKSIDSVMIPNWHRISFIS 397
Query: 269 KQLVSDLKTLRKLLDYLVRYDAVTYLKYL------DTLRVSESF-RSVWIFAESSYKIFD 321
KQL+ D++ LR LL YLV D V + + + + +S + S W+ A+ S +
Sbjct: 398 KQLIKDIRFLRYLLKYLVSADCVDFYEEIQLSIEANKPSISRKYSESPWLMADESQLVIS 457
Query: 322 YAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEA 381
+++KRVY EDE LEE
Sbjct: 458 HSRKRVY------------------------------EDEKYQ-------------LEEL 474
Query: 382 PKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN-- 439
PKW L +L +I ER +N G L+ C D + QL +RN
Sbjct: 475 PKWDALLNILADIALER-------------SMKNVTGPTLIMCADGSTSAQLSTILRNSD 521
Query: 440 ---GSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASS 496
G+ K++ ++ KY K + ++ + +K + + A K+ +
Sbjct: 522 RKRGTRKMLEQKLNKYKFRKEERHTLLREANEKIKGNDQQINVSTAFAKEKV-----ITK 576
Query: 497 VSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKD 556
+ A AA K+R G +D D Y Q+ N
Sbjct: 577 RRRTRGAAAAAAVDKLRTAGSGEDIDGIIDKY----------------------QTINNG 614
Query: 557 SKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAE 616
+ + IE+ +S +V Y +E A + + Q L
Sbjct: 615 ANDDDPIVIEEYKIVSD-----------DDMVEYVNKDIEFASEKTDQQAWNVLLKKYQF 663
Query: 617 SKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFL 676
S V F +E+D + +I+ P I++Y PD++F+R++EVYKA N + ++F+
Sbjct: 664 VNSSNEVIIQKFSDIENDSQLQEIM-PSYIIMYEPDLTFIRRVEVYKAINAELSPNIFFM 722
Query: 677 FYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
+Y DS E Q++ I++E AF LIR+ +
Sbjct: 723 YYGDSIEEQRYLTQIKKEKDAFTKLIRENA 752
>gi|242020150|ref|XP_002430519.1| protein mei-9, putative [Pediculus humanus corporis]
gi|212515676|gb|EEB17781.1| protein mei-9, putative [Pediculus humanus corporis]
Length = 932
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 232/462 (50%), Gaps = 69/462 (14%)
Query: 28 LSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITADLPANHRHT 87
L L +I S+L ++ + ++ + L+ ++ L +++ ++ R
Sbjct: 10 LGLESVIVSLLKVYCDPGNLVFVIGAEGKLQEWLVEKLNSIDVNPKPKVSVEVGVAERKQ 69
Query: 88 LYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA 147
Y G ++FV+ RILIVD+L +RLP + G ++ H + +N + F+ R+ + N+
Sbjct: 70 SYLEGGLWFVSSRILIVDMLKKRLPVDLITGFVVCKAHNILKNHLDAFVLRLYRQDNKNG 129
Query: 148 YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMS 207
+I+AFSD+ TA GF K E+I+K+LF R + LWPR+ V L + PVVV++ + M+
Sbjct: 130 FIKAFSDQATAFTGGFNKVEQILKALFTRNILLWPRYHAIVKSSLNQCKPVVVELHLEMT 189
Query: 208 KYMGGIQKAILEVMDACLKEMRKTNKVDV-EDLTVENGLFKSFDEILRRQLDPIWHILGK 266
K M +Q A+L+++ + + E++K N + V E++TVEN + +++ ++L QLD +WH L +
Sbjct: 190 KKMLQLQSALLDLIKSTIDELKKLNPMLVTEEITVENAINETYFKVLHSQLDAVWHALSE 249
Query: 267 KTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFR--SVWIFAESSYKIFDYAK 324
+TK L++DLK ++ L+ D+V++ +++ R S+ S W F S+ +F+ AK
Sbjct: 250 RTKALLADLKLFHYMILSLLTRDSVSFYSLINSQRKSDCAMKGSGWHFLPSAEIVFNTAK 309
Query: 325 KRVYRFTRSDGVE---LNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEA 381
+RV+ +D + LN E
Sbjct: 310 QRVFSSIDADPTDPKHLNA--------------------------------------EPH 331
Query: 382 PKWKVLREVLEEIEEERLKQA-------SSREEV------LLDGEEND------------ 416
PKW +L E+L EI +E KQ S ++V + D E N
Sbjct: 332 PKWLILSEILLEIHKEFKKQEPMVKVENSDNDDVEKKMKEMFDEEPNTTKNESQSSECEI 391
Query: 417 HGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQ 458
G +L+ +DE +C QL+ + G E++++ + K+L +K+
Sbjct: 392 FGDILILTRDERNCFQLQTYLTTGEEELLKIQSRKFLFNKIH 433
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
KP I++Y P+M+ VRQ+EVY+ +NP I++KVYFL + + E Q + +R+E AF+ L
Sbjct: 575 KPRWIIIYDPEMTLVRQVEVYQRKNPEIQIKVYFLVFGGTIEEQSYLTSLRKEKEAFDFL 634
Query: 702 IRQKSFMMIPID 713
I +K+ ++IP D
Sbjct: 635 IEEKARIVIPTD 646
>gi|357618962|gb|EHJ71746.1| hypothetical protein KGM_15729 [Danaus plexippus]
Length = 838
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 232/453 (51%), Gaps = 72/453 (15%)
Query: 24 LSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITADLPAN 83
++ GLS +++++L ++ +L+++SS + + N +LP+ +
Sbjct: 1 MAKGLSYNSIVSNLLWVYKDPGNLVLIINSSDHEEKFFSEKF--NLSVLPN------LGS 52
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R Y G I+FV+ RIL+VDLL +R+P +++ G+I+L H + E+ E F+ R+ +
Sbjct: 53 EREKAYLEGGIYFVSTRILVVDLLKKRVPVTHITGIIVLRAHTVLESCQEAFVLRLFRQN 112
Query: 144 NREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVR 203
N+ +I+AFS+ P + G+ + E++M+++F+++L+LWPRF V + L+ V ++
Sbjct: 113 NKTGFIKAFSNSPISFTFGYHQVEKVMRAVFVKELYLWPRFHGLVIKSLKSRQAEVEEIH 172
Query: 204 VPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWH 262
V ++ M IQ +L++M+ +K+++ N+ +D++++T EN + K F +IL+ QLD +WH
Sbjct: 173 VSLTPNMLQIQTCLLDIMNYTVKQLKSINRNLDMQEITTENCITKKFHKILQSQLDCVWH 232
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE--SFRSVWIFAESSYKIF 320
L +TK+ + DLK LR L+ L+ D+V++ + R SE S WI +S+ ++F
Sbjct: 233 QLSNRTKEYIQDLKVLRTLIVNLIHEDSVSFYWLVSKYRTSEYAQVNSGWILLDSAERLF 292
Query: 321 DYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEE 380
A+ RV+ +G E + E
Sbjct: 293 KVARSRVF-----NGNEFDP--------------------------------------EH 309
Query: 381 APKWKVLREVLE-EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
PKWK L ++L+ EI EE K+ +G N+ VL+ C++ +C QL + +
Sbjct: 310 CPKWKCLSDLLKVEIPEEVKKKN--------NGSLNNTK-VLILCENNKTCFQLNNVLTM 360
Query: 440 GSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
G+ +YL R +Q +S K K
Sbjct: 361 GA--------NRYLFYNAFRRDIQITSVSSKYK 385
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 613 DTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPS 668
D + ++ KP+ + + + + L+ L+P I++Y D+S VRQIE+Y+ +
Sbjct: 450 DLTQLENEKPLICIQTFKQNGNHFSLEQTLEALRPEYIILYQSDVSAVRQIELYECKKKP 509
Query: 669 IKLK--VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
+ K +YFL ++ + E Q + +RRE AFE LI+ KS M++P
Sbjct: 510 EEPKSKIYFLIHDKTVEEQSYLTSLRREKQAFEMLIQAKSVMVVP 554
>gi|156838356|ref|XP_001642885.1| hypothetical protein Kpol_1007p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113462|gb|EDO15027.1| hypothetical protein Kpol_1007p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 1062
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 186/758 (24%), Positives = 328/758 (43%), Gaps = 140/758 (18%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPSQ-------GTLLLLSSS 54
L F Q ++ L N LVIL GL + +++++L +L +P++ +L+L+++
Sbjct: 101 LSFQQQVVENALV-SNDPLVILGKGLGMMSIVSNLLHILATPTKLDGKLKRSLVLVLNAT 159
Query: 55 PNLKSQIIHYL--------------------------APNAPLLPSEITAD-LPANHRHT 87
+ +I L P + +TAD L R
Sbjct: 160 QSDNQRIGEELQELFWLSDDDDDNNLSKNGNISSDQNGNENPRSFNVVTADSLSVEKRSK 219
Query: 88 LYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREA 147
LY SG I VT RILIVDLL+ + + + G+++LN L S E+FI I +S N+
Sbjct: 220 LYLSGGIISVTSRILIVDLLSGIIHPNRITGIVVLNVENLRHYSNESFIIEIFRSKNKWG 279
Query: 148 YIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS----EELEREPPVVVDVR 203
+++ FS+ P + V F+ R MK L + + LWPRF+V +S + L+++ V++++
Sbjct: 280 FLKGFSESPESFVMEFSPLMRKMKDLKFKNVLLWPRFRVEISSCLNDILKQKSQKVIEIK 339
Query: 204 VPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWH 262
V ++ M IQ ++E + C+ E+ RK +++ ++ +EN L +F + + P WH
Sbjct: 340 VSLTNSMSQIQFGLIECLKKCIAELIRKNSELALDWWNIENALDLNFQRSIDSVMVPNWH 399
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL------DTLRVSESF-RSVWIFAES 315
+ ++KQLV D++ LR L+ LV D+VT+ + L + +S + S W+ A
Sbjct: 400 RISFESKQLVKDIRFLRHLMKLLVTSDSVTFYEELQLSLEANKPSISRKYTESPWLMATE 459
Query: 316 SYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLE 375
S + +++KR+Y DN +
Sbjct: 460 SQLVISHSRKRIY---------------------------DNERYQ-------------- 478
Query: 376 EVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLED 435
LEE PKW+ + +LE+I +R +G L+AC D +C Q+
Sbjct: 479 --LEEQPKWEQVLSILEDISYQR-------------NISKKNGPTLIACSDPATCRQITS 523
Query: 436 CI-----RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQ 490
+ ++G + +M ++ Y K + + + + K++++ K + V +
Sbjct: 524 VLAYSNRKDGIKNLMNQKLNLYRYRKEENKRLLKEANDKETQDTK-----EIVVSTAFVK 578
Query: 491 NAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVP 550
S + A +AA ++RN G +D +N Y R G
Sbjct: 579 EEVVSKRRRTRGAATVAAVERLRNAGAGEDIENIIDDYDVSWDEMSRVIDEEVLGS---- 634
Query: 551 QSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSL 610
E NE DE + A KEV W++ +
Sbjct: 635 ------------------DEYIKYSNEA-EDEAFESDTETAETCFSAARTSKEV-WEK-V 673
Query: 611 KTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIK 670
K D + + V +A +D+ L + P I++Y PD++FVR +E+Y+A N
Sbjct: 674 KNDYHYINCNDQI-IVDCFANLNDETALQEVMPSHIIMYEPDLTFVRNLEIYRAINHEQA 732
Query: 671 LKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
+YF++Y DS E Q+ I++E AF LIR+ + +
Sbjct: 733 PVIYFMYYGDSIEEQRHLTAIKKEKDAFTKLIRENAML 770
>gi|254569814|ref|XP_002492017.1| Single-stranded DNA endonuclease (with Rad10p) [Komagataella
pastoris GS115]
gi|238031814|emb|CAY69737.1| Single-stranded DNA endonuclease (with Rad10p) [Komagataella
pastoris GS115]
gi|328351490|emb|CCA37889.1| DNA excision repair protein ERCC-4 [Komagataella pastoris CBS 7435]
Length = 960
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/643 (25%), Positives = 298/643 (46%), Gaps = 124/643 (19%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I A+ R +Y+SG I VT RI IVDLL+ L + + G+I+L+ +T+ S E+F
Sbjct: 141 IDANYVVGKRSKIYASGGIISVTSRIFIVDLLSNLLNLNLITGIIVLHAEKVTDTSNESF 200
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE 195
I + N+ +++A SD + GF + +K L + +WPRF + V+ L+
Sbjct: 201 IIDFYRQTNKWGFVKAISDDVEKFIHGFQPLKTKLKDLKLSNTLIWPRFHIEVANSLKMN 260
Query: 196 PP--VVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEI 252
+VV++ V ++K M IQ AIL ++AC+ E+++ N ++ E + N L K F ++
Sbjct: 261 SKNNLVVEISVSLTKRMKTIQLAILSCIEACINELKRHNPEMSTEYWDISNALNKEFVQV 320
Query: 253 LRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL-RVSESFR--SV 309
+R LDP+WH TKQ++ D+ TL++LL YL+ YDA+ + + + T+ V++S + S
Sbjct: 321 IRATLDPVWHRCSWTTKQVIHDISTLKELLGYLLNYDAIKFYETIKTIFDVNKSTKNSSP 380
Query: 310 WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTS 369
W+ + + I +++RV+ T S+
Sbjct: 381 WLMLDEAISILSLSRERVFLQTSSEPQSF------------------------------- 409
Query: 370 TKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECS 429
+LEE PKW+ L E+ ++I ++R + G N+ G +L+ C + +
Sbjct: 410 -------LLEELPKWQQLTEIFQDIADDRSR-----------GNMNE-GPILIMCNERST 450
Query: 430 CMQLEDCIRNGSEKVMREEWEKYLLSKV-QLRSVQTSSKKKKSKEPKGYGILDGVAPVKI 488
C+QL + + + K+++ + VQ + K+ K +G+ K+
Sbjct: 451 CVQLRKYLSQNTNRAT--PGRKFMMMGLNHYNQVQKALKQLK----------EGLKQEKV 498
Query: 489 AQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPAC 548
++ + +AL + + RN+ + T +G + R N A
Sbjct: 499 VESTDL--------EALTVSKTFTRNRAHATSSKRRRT----RGNKAIQAVDRLYNRDAF 546
Query: 549 VPQSANKDSKSNSKAAIEDKP-----EISGSGNEGPADEIHSGVVGYSGGMLETAFVEKE 603
+ Q +++ + SN + ED E++GS N ++ +S + +EK
Sbjct: 547 IEQDSDQLNISNLE---EDSDPGADFEVTGSRN---------LILSHSIEPADQIVIEK- 593
Query: 604 VQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYK 663
+ +++ +LD L P I++Y P++SF+R+IEVY+
Sbjct: 594 -------------------------FDARTNESLLDELNPSHIILYEPNLSFIRRIEVYE 628
Query: 664 AENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
A + +F++Y+DS E + + I+RE AF LIR+K+
Sbjct: 629 AIRKQRAAQTFFMYYKDSVEEETYLNSIKREKEAFTKLIREKA 671
>gi|366991689|ref|XP_003675610.1| hypothetical protein NCAS_0C02540 [Naumovozyma castellii CBS 4309]
gi|342301475|emb|CCC69244.1| hypothetical protein NCAS_0C02540 [Naumovozyma castellii CBS 4309]
Length = 1093
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 193/758 (25%), Positives = 337/758 (44%), Gaps = 130/758 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPSQ-------GTLLLLSSS 54
L F Q ++ L + LVI+ GL + ++A++L +L +P++ +L+L++
Sbjct: 88 LLFQQQVVESALI-TDDPLVIMGKGLGMASIVANLLQILATPTKLNDQLKRSLVLVLNAR 146
Query: 55 PNLKSQIIHYL-----------------APNAPLLPSE----------ITAD-LPANHRH 86
P +I L A N + E I+AD L +R
Sbjct: 147 PRDNQRIQEELQELSWLSMENEGDDNGDATNEEYIIDEESPYNRPFSVISADSLSVENRR 206
Query: 87 TLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNRE 146
LY SG I VT RILIVDLL+ L S + G+++LN L +S +FI I +S N+
Sbjct: 207 KLYLSGGIICVTSRILIVDLLSGILHPSRVTGMVVLNVEDLRNHSNVSFILEIYRSKNKW 266
Query: 147 AYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVV----VDV 202
+I+AFS+ P + F+ M+ L +R + LWPRF+V VS L + P V ++V
Sbjct: 267 GFIKAFSESPESFTLEFSPLLSKMRDLRLRNVLLWPRFRVEVSACLNKLPNTVSNSVIEV 326
Query: 203 RVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIW 261
+V ++ M IQ ++E + C+ E+ RK ++ +E ++N L +F + + + P W
Sbjct: 327 KVSLTNSMSQIQFGLMECLKKCIAELNRKNPELFLEWWNIDNALDINFLKSIDSVMIPNW 386
Query: 262 HILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL------DTLRVSESF-RSVWIFAE 314
H + ++KQL D++ L+ LL L+ DAV + + + + +S + S W+ A
Sbjct: 387 HRISYESKQLTKDIRYLKNLLKLLINADAVDFYEEIQLSLEANKPSISRKYSESPWLMAN 446
Query: 315 SSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVL 374
S + YAKKR+ +DG
Sbjct: 447 ESQLVISYAKKRII----NDG--------------------------------------- 463
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
+ LEE PKW+ L +L++I ERL + S G L+AC D +C QL
Sbjct: 464 DYFLEEMPKWEQLISILDDIAHERLTKDS-------------QGTTLIACSDSATCAQLT 510
Query: 435 DCI-----RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIA 489
+ +NG ++M + + Y + Q R + K+ +SK P + A
Sbjct: 511 RVLACSDRKNGLRRIMLRKLQHYKALRDQRRKI---IKEVRSKGPAVSNPNELNVSAAFA 567
Query: 490 QNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACV 549
+ + + A +AA ++R G DD ++ Y K G + + +
Sbjct: 568 KEEIITKRRRTRGAAAVAAVERLRTAGTGDDIESKIDSYDIKEELTHIGDDDSLKSDSIL 627
Query: 550 PQSANKD-SKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKR 608
+ + D + +A + + + + E H+GV KE+ W+
Sbjct: 628 NKFVDDDIGVPDIEADLPEDDDDDSAAEELYLKTAHTGVT-------------KEL-WEA 673
Query: 609 SLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPS 668
+K S++ + + V ++ +D + + P I+++ PD+S +R++EVY+A +
Sbjct: 674 RVKNFEYISRNEQII--VEKFSNLNDDSTFEEIMPSYIIMFEPDLSVIRRVEVYRAIHRE 731
Query: 669 IKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
+ KVYF++Y +S E Q I++E AF LIR+ +
Sbjct: 732 LAPKVYFMYYGESVEEQSHLTAIKKEKDAFTKLIREHA 769
>gi|195456914|ref|XP_002075343.1| GK17500 [Drosophila willistoni]
gi|194171428|gb|EDW86329.1| GK17500 [Drosophila willistoni]
Length = 997
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 193/339 (56%), Gaps = 26/339 (7%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSS------ 54
++LE+ + + +++Q GL++ + GLS +++ ++L +S + +L+++SS
Sbjct: 72 VLLEYEKQMFLDMVQA--DGLLVCAKGLSFERVLLNILKAYSDTGNLVLVINSSDWEEQY 129
Query: 55 --PNLKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLP 112
L+S+ +H +A A R +Y G I F+T RIL+VDLL QR+P
Sbjct: 130 YKSKLESKYVHEVANTA-------------TERERVYVEGGIQFITTRILVVDLLKQRIP 176
Query: 113 TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKS 172
+ G+I+L H + E+ E F R+ + N+ +I+AFS A G+A +R M++
Sbjct: 177 IELITGIIVLRAHTIIESCQEAFALRLYRQSNKTGFIKAFSCSAEAFTIGYAHIQRTMRN 236
Query: 173 LFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
LF++ L++WPRF V L+ +++ VP++ M IQ IL++M+ ++E+++ N
Sbjct: 237 LFVKNLYIWPRFHATVRSVLKPWEAQTIELHVPLTPSMTAIQTHILDIMNFLVREIKRIN 296
Query: 233 K-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
+ VD+E +TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +D+V
Sbjct: 297 RTVDLESVTVENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDSV 356
Query: 292 TYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVY 328
+ + R E S W +++ +IF +++RV+
Sbjct: 357 SAYALIKRYRGKEYALSNSGWTLLDAAEQIFKLSRERVF 395
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ ++ +RQ+EV++A P ++KVYFL + + E Q + +RR
Sbjct: 605 MLEQLQPHYVVMYNTNVMAIRQLEVFEARRRLPPKERMKVYFLIHARTVEEQSYLTSLRR 664
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 665 EKSAFELIIDTKSKMVIP 682
>gi|320583994|gb|EFW98206.1| DNA repair like-protein Rad1 [Ogataea parapolymorpha DL-1]
Length = 997
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 185/774 (23%), Positives = 332/774 (42%), Gaps = 168/774 (21%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPS-----QGTLLLLSSSP 55
+ L + + I+ EL++ + GLVIL GL L ++A++L + S + +LL+++S
Sbjct: 65 LSLGYQRQIVQELIE--DDGLVILGRGLGLETIVANLLHVLGLSVIEDKKSLVLLVNASE 122
Query: 56 NLKSQIIHYL-------APNAPLLPSEITAD-LPANHRHTLYSSGQIFFVTPRILIVDLL 107
+I L + P+ ++ D + R LY G I +T R+L+ D L
Sbjct: 123 AEIYKIGEELRELAWLDGKDEPVSFLSVSRDPTTLDKRRRLYEKGGILAITTRVLVTDFL 182
Query: 108 TQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTE 167
L + G++ L+ + E S+E FI + + N+ +++A SD+P +M +GF
Sbjct: 183 GDVLNPDLVTGIVFLHAERVKEYSSERFIANLYRKKNKWGFVKALSDEPESMGAGFQPLY 242
Query: 168 RIMKSLFIRKLHLWPRFQVNVSEELE--REPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
+K L ++K+ LWPRF V+++ L+ + V ++ V M+ YM IQ +L M+AC+
Sbjct: 243 TRLKYLRLQKVMLWPRFHVDITNSLKSRKVENKVTEINVQMTDYMLKIQTGLLACMEACI 302
Query: 226 KEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDY 284
E+++ N ++ E T+EN L F +R LDP WH + TKQ++ D TLR+LL
Sbjct: 303 NELKRHNPEIASEYWTIENALDDEFVRNIRATLDPYWHRVSSTTKQVLYDFATLRELLGR 362
Query: 285 LVRYDAVTYLKYLDTL------RVSESFRSV--WIFAESSYKIFDYAKKRVYRFTRSDGV 336
L +D+V + + L ++ V+ + +++ W+ + + + +K RV+
Sbjct: 363 LFTWDSVQFYQELSSIVEANKPSVTNNNKTMAPWLLLDEAMTVISCSKARVF-------- 414
Query: 337 ELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEE 396
KV ++ D + +LEE PKW+ L +L++I E
Sbjct: 415 ----------------DKVRDDNDAEATY-----------LLEELPKWEQLAMILDDINE 447
Query: 397 ERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSK 456
E+ G+ ++ G VL+ C C
Sbjct: 448 EKQH-----------GDHSEDGPVLIMCT-TAHCYS------------------------ 471
Query: 457 VQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQG 516
QLR+ S K+ ++ G+ + + + Q+ + + +++ NQ
Sbjct: 472 -QLRNFLMSYKEYRAGNRTGFSARKLMVRI-LKQHLAWKKGTGSRTVKIQKELNRVSNQA 529
Query: 517 KSDDGDN---PETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISG 573
+SD D+ T+ K R + R G A + SK+ ++D
Sbjct: 530 RSDMDDDVAVSRTFVRRKAVPNKRRRAR---GGAVMTSYNRMLSKTEDDDTVDDA----- 581
Query: 574 SGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHF----- 628
+H +V +E EV L D + +D VPP F
Sbjct: 582 ---------VHEAMVD---------MLENEV--GADLSDDEIKEEDIGSVPPEEFEEFMD 621
Query: 629 -------------------YALESDQPI------------LDILKPFVIVVYHPDMSFVR 657
Y +DQ I L+ + P I++Y P+++F+R
Sbjct: 622 HLEQTPDFEEVRSHGITFEYVDRTDQIIIEKFDAKASNYLLEEVMPSYIILYEPNLAFIR 681
Query: 658 QIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++E++++ + + YF++Y DS E Q + I+RE AF LIR+KS M+P
Sbjct: 682 RVELFQSLRHTNPARCYFMYYGDSIEEQGYLNSIKREKDAFTRLIREKS--MLP 733
>gi|194764346|ref|XP_001964291.1| GF21474 [Drosophila ananassae]
gi|190619216|gb|EDV34740.1| GF21474 [Drosophila ananassae]
Length = 972
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 227/451 (50%), Gaps = 62/451 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
++LE+ + + +L+ E GL++ + GLS +++ +L S + G L+L+ +S + + Q
Sbjct: 57 VLLEYEKQMYLDLVLE--DGLLVCAKGLSYERVLIHILKSFSDA-GNLILVINSSDWEEQ 113
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+Y + P ++ A R +Y G + FV+ RIL+VDLL QR+P + G+I
Sbjct: 114 --YYKSKLDPKYVHDVANT--ATERERVYLEGGLQFVSTRILVVDLLKQRIPIELITGII 169
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+L H + E+ E F R+ + N+ +I+AFS+ A G++ ER M++LF++ L +
Sbjct: 170 VLRAHTIIESCQEAFALRLYRQKNKTGFIKAFSNSAEAFTIGYSHVERTMRNLFVKNLFI 229
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDL 239
WPRF +V L +++ VP++ IQ IL++M+ ++E+++ N+ VD+E +
Sbjct: 230 WPRFHASVRNALHPWQAQTIELHVPLTPSQTSIQTHILDIMNFLVREIKRINRTVDMEAV 289
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ +
Sbjct: 290 TVENCVTKKFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYALMKR 349
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R E S W +++ +IF +K+RV+ NGQ
Sbjct: 350 YRSKEYALSNSGWTLLDAAEQIFTISKQRVF----------NGQQ--------------- 384
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E PKW+ L E+L + +++ E+
Sbjct: 385 -----------------EFEPEACPKWQPLTELLTQDVPGDMRRCRRTEQ---------- 417
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + G + + ++
Sbjct: 418 PKVLILCQDARTCHQLKQYLTQGGSRFLLQQ 448
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEV 684
F ALE +L+ L+P +V+Y+ +++ +RQIEV++A P+ ++KVYFL + S E
Sbjct: 581 FMALEH---MLEQLQPHYVVMYNTNVAAIRQIEVFEARRRLPPADRMKVYFLIHAKSVEE 637
Query: 685 QKFKAGIRRENGAFESLIRQKSFMMIP 711
Q + +RRE AFE +I KS M+IP
Sbjct: 638 QAYLTSLRREKAAFELIIDTKSKMVIP 664
>gi|358331704|dbj|GAA27627.2| DNA excision repair protein ERCC-4 [Clonorchis sinensis]
Length = 987
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 229/448 (51%), Gaps = 34/448 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ ++ ++ ++ L++++ GL + ++ S L LHS LLL+S+ +++
Sbjct: 4 LLEYEASLLLDIHED--SSLLVVAEGLGMDTIVYSTLKLHSDPH-NLLLVSNYRLAEARF 60
Query: 62 IHYLAPNAPLL--PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
+ L +L P ITA++ R +Y G + FVT RIL+VDLL +R+P + ++G+
Sbjct: 61 LSELLAKDDVLHSPGIITAEVNNKEREAIYKRGGVVFVTSRILVVDLLIERMPVTLVSGV 120
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
+IL H L E E F R+++ N +I+A SD ++ SG+ E IMK I KL
Sbjct: 121 LILRAHELQEACQENFAIRLLRERNPSIFIKAMSDNAVSLTSGYNHAESIMKQAGIPKLV 180
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV-DVED 238
LWPRF + V P V +VRV ++ M Q IL+++ AC++E+ N V + ++
Sbjct: 181 LWPRFNLQVVSCFAATQPQVEEVRVQLTSCMSTCQSCILDLVKACIRELIDLNPVLNTDE 240
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L++EN L +FD ++ LDP+WH L +++L+SD+ LR+LL L+ DAV++L L+
Sbjct: 241 LSLENALLPNFDGLIGMYLDPVWHQLTTTSRRLISDIANLRRLLRILIEGDAVSFLNNLE 300
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
R ++ I S ++ ++ Y ++ + +T + ++ +
Sbjct: 301 AHRQVAQTANLGISGAQSSGSAEHGRRGSY--VCPSWFLMDQSDRLLTAARSRVYR---- 354
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
+ + K V +E PKW+ L ++L +I +SRE + +N
Sbjct: 355 --------NFAEKAV---QIELTPKWEALTDILRDIH-------NSRE----NASDNLKN 392
Query: 419 IVLVACKDECSCMQLEDCIRNGSEKVMR 446
VLV E S LE +R GS + R
Sbjct: 393 QVLVLVAHENSARNLERFLRRGSCSMKR 420
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAE-------------------NPSIK-LKVYFL 676
+LD L+P +++Y P +S++R+IEV+ A P + L V+F+
Sbjct: 576 VLDSLQPRHVILYEPRVSWIREIEVHSARRHAQACGSVGAEARESTSSGPMVTPLNVHFM 635
Query: 677 FYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
YE+S E Q++ +RRE AFESLI+ S ++IP D +
Sbjct: 636 VYENSVEEQRYLTQLRREREAFESLIQLSSHIVIPKDAL 674
>gi|448522205|ref|XP_003868637.1| Rad1 single-stranded DNA endonuclease [Candida orthopsilosis Co
90-125]
gi|380352977|emb|CCG25733.1| Rad1 single-stranded DNA endonuclease [Candida orthopsilosis]
Length = 1010
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 199/755 (26%), Positives = 330/755 (43%), Gaps = 155/755 (20%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-LHSPSQGTLLLLSSSPNLKS 59
++L++ Q I+ E+L + L++L GL + ++L L SP + LS + KS
Sbjct: 77 LLLKYQQEILEEMLVK--DALLVLGRGLGWESITGNLLYSLSSP----FIQLSKTQKKKS 130
Query: 60 QIIHYLAPNAPLLP-SEITADLP------------------ANHRHTLYSSGQIFFVTPR 100
I A ++ ++ SE DL ++ R +YS G I +TPR
Sbjct: 131 LIFLLNAKDSEIIRLSEELDDLSWINDDIGNRFVTVSGESQSSKRKLIYSEGGIISITPR 190
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
+L+VD+L+ L +++ GL +L+ + E S + FI + + N +++AFSD+P +
Sbjct: 191 VLVVDILSGILDVNDITGLFVLHAERIKETSNDAFIISLFRDKNEWGFVKAFSDEPESF- 249
Query: 161 SGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-----REPPVVVDVRVPMSKYMGGIQK 215
+GF +K L + + LWPRF V V++ + V ++ MS M IQ
Sbjct: 250 TGFTPLATKLKILRVANVSLWPRFHVTVTQSFQYYTKKNSKRFVTEINTQMSYKMNKIQA 309
Query: 216 AILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSD 274
A+L + ACL E+++ N + E +EN +F ++R LDP WH L TKQL++D
Sbjct: 310 ALLSCIQACLGELKRHNPTLATEYWDMENIHDPNFVRVIRVSLDPQWHRLTYTTKQLIND 369
Query: 275 LKTLRKLLDYLVRYDAVTYLKYLDTL-------RVSESFRSV--WIFAESSYKIFDYAKK 325
L L +LL+ LV D+V++ + + + V RS+ W+ + S + YAK+
Sbjct: 370 LVILLELLESLVALDSVSFYQVVKNIVDVNLKQTVVGMNRSMSPWLNLDESQTVIQYAKE 429
Query: 326 RVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWK 385
R + NG E +LEE PKW
Sbjct: 430 RALG-------KYNG----------------------------------EYILEELPKWN 448
Query: 386 VLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVM 445
L ++++I E+ + S + G VL+ C S KV
Sbjct: 449 QLGILIDDILNEKSQNNSE-----------NSGRVLIMC---------------SSRKV- 481
Query: 446 REEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDAL 505
QL V T+ K+KKS K + + N + +E AL
Sbjct: 482 ----------AAQLNQVLTTMKEKKSGANKHF------SSRSFMTNRLRDYLQYKEISAL 525
Query: 506 LAAAS-KIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAA 564
+ S ++ + G+ +DG + +T K +RNG Q +K ++ +
Sbjct: 526 VKKISHELEHAGEENDGASEDTEIAV-------SKTFSRNG-----QPVSKRRRTRGASV 573
Query: 565 IEDKPEISGSGNEGPA---DEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKD-- 619
+ ++ GN G DE + + + VE++ + SL D S++
Sbjct: 574 VARVHQLHTGGNFGDNENDDEKENENIMDLLAEDKDEGVEEKDGIEESLSGDIVASEELN 633
Query: 620 -----SKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVY---KAENPSIKL 671
S V Y + D L+ L P I++Y PD+SF+R+IE+Y KA+NP+
Sbjct: 634 FDWIKSNDQILVQVYNDKHDASFLEELSPSHIIMYEPDLSFIRRIEIYQAMKADNPA--- 690
Query: 672 KVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
KVYF++Y +S E QK I++E AF LIR+K+
Sbjct: 691 KVYFMYYGNSVEEQKHLLRIKKEKDAFTRLIREKA 725
>gi|330801891|ref|XP_003288956.1| hypothetical protein DICPUDRAFT_48253 [Dictyostelium purpureum]
gi|325080987|gb|EGC34520.1| hypothetical protein DICPUDRAFT_48253 [Dictyostelium purpureum]
Length = 902
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 240/461 (52%), Gaps = 44/461 (9%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN--LK 58
M LEF++ I + N G V++ +GL + +I L +S S +L L N L+
Sbjct: 1 MKLEFYKEIFDGCFK--NDGFVVMGNGLGIHNIILGFLKWYSDSSDLVLFLDCKSNESLQ 58
Query: 59 SQIIHY------LAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLP 112
+ + Y LP+ I + + + +Y G ++F + IL++D LT+R+P
Sbjct: 59 NSYLFYCERLINFGIKYSSLPTLINQEHSGSSKINMYLKGGVYFGSASILVLDFLTKRMP 118
Query: 113 TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKS 172
++G+I+ N H +T+ S E + ++ + N++ +I+AF+++P +V K +RIMK
Sbjct: 119 CHLISGIILNNAHLITDTSIEYLLIKLFRQYNKKGFIKAFTNEPNYLVDELGKLQRIMKY 178
Query: 173 LFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR-KT 231
L + KL LWPRF N+S L++ PP ++++ + ++ M I++++ + + +C+ +++ K
Sbjct: 179 LHVGKLFLWPRFHQNISCILDQHPPDLIELSIQLTPTMKKIEESLNQTIKSCIIQLKTKN 238
Query: 232 NKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
N V +D FD ++ +QL PIW + +KQL+S +K L++L L+ YD V
Sbjct: 239 NLVHFDD--------DLFDTMIEQQLKPIWSKVSNYSKQLISSIKLLKRLSSNLLSYDCV 290
Query: 292 TYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
T+ L L + E W+ + + ++F +++RVY+ ++ N + + KK+
Sbjct: 291 TFYHLL--LMIKEDQIQTWLENKEATQLFKNSQERVYKLKNNNNKNNNNNNNNKNTKKKS 348
Query: 352 LKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
K+ ED + +LE LEE PKW +L ++L+EIE + +S E+
Sbjct: 349 EKEERLVEDLNDKNR------ILE--LEENPKWNLLYQILKEIEND-----NSVEQ---- 391
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
G L+ KDE + QL + +G + +++EK+
Sbjct: 392 ------GTTLIFVKDERTVQQLYSYLNDGGFNFLLKKYEKF 426
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 624 PPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTE 683
P + + +ES ILD ++P I++Y PD++ VRQIEVYKAENP I L+VY + Y TE
Sbjct: 552 PYIVIHPIESSLTILDEIRPTNIIIYDPDVALVRQIEVYKAENPGIPLRVYLMTYS-GTE 610
Query: 684 VQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
++ + RE +FE LIR+KS ++I +Q
Sbjct: 611 EYRYIQQLNREKNSFEKLIREKSNLVIDSNQ 641
>gi|328873578|gb|EGG21945.1| DNA excision repair protein 4 [Dictyostelium fasciculatum]
Length = 950
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 247/480 (51%), Gaps = 74/480 (15%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
M LE+H+ I L N GLV++S GL + +I + L ++ S L+L P +S
Sbjct: 1 MPLEYHKQIFETCLS--NDGLVVMSKGLGVQHVILAFLKVYCDSDK--LVLYVDPYSESL 56
Query: 61 IIHYLAPNAPLLPSEIT-ADLPANHRHTL-----YSSGQIFFVTPRILIVDLLTQRLPTS 114
Y N LL + A+LP + L Y G ++F I+D+L R+PT
Sbjct: 57 QESYCYYNEKLLQFGVKYANLPTFLKQELVGASKYRDGGVYFGPAATFILDMLMNRIPTD 116
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFA------KTER 168
++AG+I+ N H + + S E + + K N +I+AFS + S +A +R
Sbjct: 117 HIAGIIVDNAHRIDDLSPEALLLSLFKMRNSRGFIKAFSSDAAYITSSYASFGDINNLQR 176
Query: 169 IMKSLFIRKLHLWPRFQVNVSEELEREPPV--------VVDVRVPMSKYMGGIQKAILEV 220
++K L + +++LWPRF + V+ EL+ + ++++ +PM++ M I+KA+
Sbjct: 177 LLKLLQVPRVYLWPRFHLAVANELDTDSIAGGAVADNRLIELTIPMTESMIKIEKALTNT 236
Query: 221 MDACLKEMRKTNKVDVED--LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTL 278
++ + ++R NK +E +T+E+GLF SFD +++ D WH TKQ ++ +K L
Sbjct: 237 IEKLMGDIRSKNKHVLEKHRMTLEDGLFNSFDSMVQSWGDIGWH-----TKQNLNTIKIL 291
Query: 279 RKLLDYLVRYDAVTYLKYLDTLR-VSESFRS-----VWIFAESSYKIFDYAKKRVYRFTR 332
R L LV+YD V++LK+L+TLR V S+ + WI+ + +F+ AK+RVY ++
Sbjct: 292 RNLTTLLVKYDGVSFLKFLETLRDVDSSYNNPEDEYSWIYTRDAEHLFNSAKERVYIESK 351
Query: 333 SDGVELNGQS-KSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL 391
+ + G S + V KR+L VLEE PKW +L +V+
Sbjct: 352 LEFKKKKGDSGQKVDVYKREL------------------------VLEENPKWHLLYQVI 387
Query: 392 EEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
+EIE+ S++E ++ E +LV KDE +C QL++ + G ++ +++++
Sbjct: 388 KEIED-------SKKETGIEPE-----TILVFVKDERTCTQLQEYLDLGGYGMLLKKYDR 435
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 624 PPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTE 683
P + + +E IL+ P I++Y D++ +RQIEV++AENP + L VYFL Y DS E
Sbjct: 551 PHIIIHPIEWSGNILEDATPQHIIIYDADVTIIRQIEVFRAENPHMTLFVYFLLYSDSIE 610
Query: 684 VQKFKAGIRRENGAFESLIRQKSFMM 709
K+ + +RRE AFE LIR+K+ ++
Sbjct: 611 ESKYISILRREKDAFERLIREKASLI 636
>gi|149042524|gb|EDL96161.1| rCG64290 [Rattus norvegicus]
Length = 429
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 167/290 (57%), Gaps = 37/290 (12%)
Query: 170 MKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR 229
M++LF++KL+LWPRF V V+ LE+ P VV++RV M+ M IQ AIL+V++ACLKE++
Sbjct: 1 MRNLFMKKLYLWPRFHVAVNSFLEQHKPEVVEIRVSMTLAMLAIQTAILDVLNACLKELK 60
Query: 230 KTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
N ++VEDL++EN L K FD+ + LDP+WH LG KTK LV DLK LR LL YL +Y
Sbjct: 61 YHNLSLEVEDLSLENALGKPFDKTICHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQY 120
Query: 289 DAVTYLKYLDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSV 345
D VT+L L++LR +E S W+F ++S +F A+ RVYR
Sbjct: 121 DCVTFLNLLESLRATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDV------------ 168
Query: 346 TGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
KL K ++ G TK L VLE PKW+ L EVL+EIE E ++
Sbjct: 169 -----KLSKKTKTSEKMAGPEEQETKKEL--VLESNPKWEALTEVLKEIETE------NK 215
Query: 406 EEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSE----KVMREEWEK 451
E L G G VL+ D+ +C QL D + G+E ++ R+ +EK
Sbjct: 216 ESEALGGP----GQVLICASDDRTCCQLRDYLTAGAEAFLLRLYRKTFEK 261
>gi|449016334|dbj|BAM79736.1| probable DNA repair endonuclease XPF [Cyanidioschyzon merolae
strain 10D]
Length = 1012
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 208/774 (26%), Positives = 351/774 (45%), Gaps = 134/774 (17%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASV----LLLHSPSQGTLLLLSSSPNL 57
+L + + AE+L+ N L + S GL L L+A V LLL S+G +L + P
Sbjct: 1 MLHYEKTAAAEILRGGNS-LAVFSRGLDLGSLVAIVAAEKLLL---SEGRPILALNFPKT 56
Query: 58 KSQIIHYLAPNAP------LLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLT--- 108
Q + L P LLP +++ + A R +Y G I TPR L VDLLT
Sbjct: 57 VFQRLGRLLATHPAKFPIHLLPRHVSSSVSAVERFEVYGCGGIIAATPRTLAVDLLTAVS 116
Query: 109 -------QRLPTSNLAGLIILNTHALTENSTETFICRIIKS-LNR----EAYIRAFSDKP 156
+++PT + G++I N H ++E+ +ETF+ R+ + + R + +I AFSD
Sbjct: 117 QLGDHGAKKVPTLSFLGILIYNAHEISEHRSETFVTRLFREYVGRCELEDTFIHAFSDAA 176
Query: 157 TAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE---PPVVVD------------ 201
A+ GF E++M+ L + +L L+PRF V+V LE + P VD
Sbjct: 177 PALCRGFHSAEKLMRLLGLERLLLYPRFHVDVVTSLEHKTENPQSYVDGGYGTHSSSSAG 236
Query: 202 -----VRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLTVENGLFKSFDEIL 253
+ PM+ M IQ IL +M +C E+R+++ ++D DL V +S +
Sbjct: 237 IELLELHQPMTALMKAIQDEILVLMRSCFFELRRSSPAAELDESDLRVA-ATSRSILQAA 295
Query: 254 RRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFA 313
+R + W L +++QL+ D++ L +L L+ D VT+L YL++LR ++ S+W+
Sbjct: 296 QR-IGQEWRRLNSRSRQLLQDIQNLNSILSSLLDDDCVTFLAYLESLRDTQGATSLWMAM 354
Query: 314 ESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTS-STSTKV 372
ES+ ++ A++RV+R G + G SK + + L D E G S K+
Sbjct: 355 ESAQNLYRLARERVFR-----GTDTGGDSKLMGMQDAAL---DLRASETGELPFEFSQKL 406
Query: 373 VLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQ 432
V E KW++L+E+L+E+ + R + D VLV ++ C+
Sbjct: 407 VCP---EPNSKWELLKELLDEVVS--MLMGHQRHGNVSDASTRR---VLVLGREPCTIQF 458
Query: 433 LEDCI--RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQ 490
L + + R G+ + YL +K + K ++S P + V +++
Sbjct: 459 LAEYLHYREGAFDALHRRLLLYLGTK-------SGGKARESVRPTTATMSKAVPSLRVKS 511
Query: 491 NA----EASSVSKQEHDALLAAASKIR----NQGKSDDGDNPETYYGS-KGPGRGRGKGR 541
+A ++SS ++ EH +A + +R NQ + + D+P +G +G G R
Sbjct: 512 DAIDASQSSSNAESEHS---SACTDMRQHAPNQRITAEHDSPGQKFGHLQGDAAGHASPR 568
Query: 542 NRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVE 601
+SA+ + S P + S AD ++ S G
Sbjct: 569 ---------ESASDNYNS--------APAHASSAVSQCADAARVEILLKSYG-------- 603
Query: 602 KEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEV 661
+R T + P + L+S +P I++ P + VR+IEV
Sbjct: 604 -----RRQSSTGVENLIGPSTILP---FLLDS--------QPCSIIMLDPTLQHVREIEV 647
Query: 662 YKAENPSI-KLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQ 714
Y+A K++VY +FYE+S E + + I E AF++LIR K+ M + +DQ
Sbjct: 648 YQAAYSRFAKIRVYAVFYEESPEYELYCNAIADEKHAFQTLIRHKASMAVRLDQ 701
>gi|66809791|ref|XP_638619.1| DNA excision repair protein 4 [Dictyostelium discoideum AX4]
gi|74854253|sp|Q54PN5.1|XPF_DICDI RecName: Full=DNA repair endonuclease XPF; AltName: Full=DNA
excision repair protein ERCC-4
gi|60467224|gb|EAL65258.1| DNA excision repair protein 4 [Dictyostelium discoideum AX4]
Length = 964
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 247/474 (52%), Gaps = 54/474 (11%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN--LK 58
M LEF++ I + L + GLV++ SGL + +I L +S + +L L N L+
Sbjct: 1 MSLEFYKQIFEDCLND--DGLVVMGSGLGIHNIILGFLKFYSDTDDLVLFLDCQSNESLQ 58
Query: 59 SQIIHY------LAPNAPLLPSEITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRL 111
+ + Y LP+ + + + ++ + +YS G ++F I ++D LT+R+
Sbjct: 59 NSYLFYHERLLNFGIKYSNLPTMVNVETVSSSTKTNMYSKGGVYFGASSIFVLDYLTKRM 118
Query: 112 PTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMK 171
P + ++G+II N H +T+ S E + ++ + N++ +I+AF+ +P+ +V K +R MK
Sbjct: 119 PCNLVSGIIIQNAHRITDTSIEYLLIKLFRQNNKKGFIKAFTTEPSLLVDEIGKLQRTMK 178
Query: 172 SLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKT 231
L ++KL LWPRF ++S L++ PP +V++ + M+ M I++++ C+ +
Sbjct: 179 YLHLKKLFLWPRFHQHISLILDKHPPDLVELSIGMTNSMKRIEESLHLNTQRCISSLIAI 238
Query: 232 NKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAV 291
NK+ + SF++IL++QL P+W L +KQLVS +K L +L + L+ YD V
Sbjct: 239 NKLPRLNGGNGGNDSDSFEQILKQQLKPMWSKLNLHSKQLVSSIKLLNQLKNNLLVYDCV 298
Query: 292 TYLKYLDTLRV-SESFR-------------SVWIFAESSYKIFDYAKKRVYRFTRSDGVE 337
T+ L ++ S+S + W+ ++ + +F +++RVYRF + +
Sbjct: 299 TFYSLLLYIQASSDSLKEGLHTNSNYVDEVQPWLESKEAQNLFSASQERVYRFKKLN--- 355
Query: 338 LNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEE 397
S+ +KLK ++N D +SS++ + +L LE+ PKW VL ++L+EIEE+
Sbjct: 356 ------SLKSPPKKLKTINN--DSSSSSSSSNLEKIL--TLEDNPKWNVLYQILQEIEED 405
Query: 398 RLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
+ KQ G +L+ KDE + QL + G + ++EK
Sbjct: 406 KEKQ----------------GTILIFVKDETTVNQLSTYLDYGGYSFLLGKYEK 443
>gi|354547879|emb|CCE44614.1| hypothetical protein CPAR2_404180 [Candida parapsilosis]
Length = 1001
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 195/741 (26%), Positives = 327/741 (44%), Gaps = 136/741 (18%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-LHSP--------SQGTLLLLSS 53
L++ Q I+ E+L + L+IL GL + +++L L SP + +L+ L +
Sbjct: 74 LKYQQQILEEMLVK--DALLILGRGLGWETITSNLLFSLSSPFIQLDKTRKKKSLVFLLN 131
Query: 54 SPNLKSQIIH---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIV 104
+ + S+II ++ + ++ + ++ R ++Y G I +TPR+L+V
Sbjct: 132 AKD--SEIIRLSEELDDLSWINDDTSNRFVTVSGESQSSKRKSIYLEGGIISITPRVLVV 189
Query: 105 DLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFA 164
D+L+ L +++ GL +L+ + E S + FI + + N +I+AFSD+P + +GF
Sbjct: 190 DILSGILDVNDITGLFVLHAERIKETSNDAFIISLFRDKNDWGFIKAFSDEPESF-TGFT 248
Query: 165 KTERIMKSLFIRKLHLWPRFQVNVSEELEREPP-----VVVDVRVPMSKYMGGIQKAILE 219
+K L + + LWPRF V V++ + V ++ MS M IQ A+L
Sbjct: 249 PLATKLKILRVSNVSLWPRFHVTVTQSFQYHKKKESKRYVTEINTQMSYKMNKIQAALLS 308
Query: 220 VMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTL 278
+ ACL E+++ N + E +EN +F I+R LDP WH L TKQL++D+ L
Sbjct: 309 CIQACLGELKRHNPTLATEYWDMENIHDPNFVRIIRIALDPQWHRLTYTTKQLINDIGIL 368
Query: 279 RKLLDYLVRYDAVTY---LKYLDTLRVSESFR------SVWIFAESSYKIFDYAKKRVYR 329
LL+ LV D+VT+ +K + + + +S S W+ + S + YAK R
Sbjct: 369 LDLLENLVTLDSVTFYQIVKNIVDVNLKQSLEGMNRSMSPWLNLDESQTVIQYAKDRA-- 426
Query: 330 FTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLRE 389
+ +G E +LEE PKW L
Sbjct: 427 LGKHNG---------------------------------------EYILEELPKWNQLGI 447
Query: 390 VLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEW 449
++++I E+ ++G +N G +L+ C QL + EK
Sbjct: 448 LIDDILHEK----------AVNGTDNS-GRILIMCSSRKVANQLNRILSTMKEK------ 490
Query: 450 EKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAA 509
K R+ SS+ + Y Q + SS+ K+ + L A
Sbjct: 491 ------KSGSRT-HFSSRSYMMNRLRDY-----------LQYKKISSLVKKISNELEHAN 532
Query: 510 SKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKP 569
N+G S D + + S+ G+ K R G + V + + S+ D+
Sbjct: 533 EG--NEGASADSEITVSKTFSRN-GQPVSKRRRTRGASVVARVHQLHTGSHDGENENDEE 589
Query: 570 EISGSGNEGPADEIHSG-VVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHF 628
+ S + ADE + V G GM++T F E W +S V
Sbjct: 590 RENSSIVDLLADEDEANEVEGELSGMIDT-FHELSFDW-----------INSNDQIIVQV 637
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKA---ENPSIKLKVYFLFYEDSTEVQ 685
Y + D L+ L P I++Y PD+SF+R+IE+Y+A +NP+ KVYF++Y +S E Q
Sbjct: 638 YNDKHDASFLEELSPSYIIMYEPDLSFIRRIEIYQAIQSQNPA---KVYFMYYGNSVEEQ 694
Query: 686 KFKAGIRRENGAFESLIRQKS 706
K I++E AF LIR+K+
Sbjct: 695 KHLLRIKKEKDAFTRLIREKA 715
>gi|12858048|dbj|BAB31184.1| unnamed protein product [Mus musculus]
Length = 296
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 157/253 (62%), Gaps = 4/253 (1%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 15 LLEYERQQVLELLD--SDGLVVCARGLGTDRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 72
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G++
Sbjct: 73 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITGIL 132
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RKL+L
Sbjct: 133 VYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYL 192
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDL 239
WPRF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL
Sbjct: 193 WPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDL 252
Query: 240 TVENGLFKSFDEI 252
++EN L K FD++
Sbjct: 253 SLENALGKPFDKV 265
>gi|256081825|ref|XP_002577168.1| DNA repair endonuclease xp-f / mei-9 / rad1 [Schistosoma mansoni]
gi|360043956|emb|CCD81502.1| putative dna repair endonuclease xp-f / mei-9 / rad1 [Schistosoma
mansoni]
Length = 954
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 214/430 (49%), Gaps = 53/430 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I+ ++ E L++L+ GL + +I + L LHS +L +
Sbjct: 4 LLEYEASILVDIHHE--SSLLVLADGLGMDTIIYNTLRLHSDPHNLVL-----------V 50
Query: 62 IHYLAPNAPLL------------PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQ 109
+Y P A L P ITA++ R +Y G + FV+ RIL+VDLL +
Sbjct: 51 SNYRIPEARFLAGILEKNGIIHSPGIITAEVNNKEREAIYKRGGVVFVSSRILVVDLLME 110
Query: 110 RLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERI 169
R+P S ++G++IL H L E ++F+ ++++ N + +I+AFSD ++ SG+ ERI
Sbjct: 111 RMPVSLVSGVLILRAHELHEACQDSFVIQLLRERNPQLFIKAFSDNSLSLTSGYNHAERI 170
Query: 170 MKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR 229
M L I KL LWPRF + V L P V +V V ++ M Q IL++M A LKE+
Sbjct: 171 MLLLGISKLVLWPRFNMQVVSCLNESQPDVEEVHVKLTSEMIICQSCILDLMKASLKELC 230
Query: 230 KTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
N ++ +DLT+E L +FD ++ +DP+W+ L +++LV D+ +LR+LL L+
Sbjct: 231 DQNPTLNTDDLTLEKALLPNFDSLISLYVDPVWNQLSSVSRRLVGDIASLRRLLHLLIEG 290
Query: 289 DAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRV---YRFTRSDGVELNGQSKSV 345
DAV +L ++ LR + S+ + +S A + + ++D + + +S+
Sbjct: 291 DAVNFLTNIEGLR-QAALASLGVTQKSEINSRRAASRGCPSWFLMDQADRLLASARSRVY 349
Query: 346 TGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSR 405
+KL V E +PKWK L E+L+EI Q S+
Sbjct: 350 ADYSKKLLNV-----------------------EISPKWKALSELLKEIYTNTTDQTSNS 386
Query: 406 EEVLLDGEEN 415
++L EN
Sbjct: 387 TILILVSREN 396
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 19/96 (19%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKA-------------------ENPSIKLKVYFLF 677
+LD+L+P +++Y P++S+VR++EVY A N LK+YF+
Sbjct: 560 VLDVLQPNYVILYEPNVSWVRELEVYNARLLIQRFSKNESSSNIGERNNSLPSLKIYFVL 619
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
YE+S E Q++ +R+E AFESLI+ S ++IP D
Sbjct: 620 YENSVEEQRYLTSLRKEKEAFESLIQLSSTIVIPKD 655
>gi|312373439|gb|EFR21182.1| hypothetical protein AND_17419 [Anopheles darlingi]
Length = 1038
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 226/454 (49%), Gaps = 63/454 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + +LL LV+ + G+S +++ ++L + + TL+L+ + +
Sbjct: 44 LLEYEKQMFFDLLH--TDALVVCAKGISYERVLLNLLKIFCDN-STLVLVVNCSETEETF 100
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
NA + TA L T Y G I F++ RIL+VDLL R+P + G+ +
Sbjct: 101 YRTHLENAEHIHE--TAKLTTERERT-YLQGGIQFISTRILVVDLLKNRIPIELITGIFV 157
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
+ H + E+ E F R+ + N+ +I+AFS A G+ E++M++LF+++L +W
Sbjct: 158 VRAHEIVESCQEAFALRLYRQRNKVGFIKAFSRNVEAFTYGYGHVEKVMRNLFVKELLIW 217
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
PRF V + L+ P VV++++PM++ M +Q +L++M+ +K ++ N+ V+++++T
Sbjct: 218 PRFHVTIQRSLKPYEPAVVEIQIPMTQSMILLQTNLLDLMNYLVKSVKSLNRFVELQEVT 277
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
VEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + D+V++ L
Sbjct: 278 VENCVTKKFHKILQAQLDTIWHQLSAQTKLIVADLKVLRSLMVSCLYGDSVSFYALLKRY 337
Query: 301 RVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
R E S W E++ ++F AK+R++ N
Sbjct: 338 RTKEYALSNSGWTIMEAAERVFTVAKERIF----------------------------NR 369
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLE-----EIEEE--RLKQASSREEVLLD 411
E E E +PKWK L +VL +I+E ++++ R++ L
Sbjct: 370 ESEFEP--------------ELSPKWKALLDVLRVDIPADIKETAGKIRRKEERQKYL-- 413
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRNGSEKVM 445
+L+ C+D +C QL + E+ +
Sbjct: 414 ---QQQVKILILCQDARACYQLNQVLTQSPERYL 444
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 630 ALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSI---KLKVYFLFYEDSTEVQK 686
AL S L+ + P I++YH +++ +RQIEVY+A +++V+ + Y + E Q
Sbjct: 642 ALGSLDRTLEQINPRYIIMYHTNVTAIRQIEVYEARQQRAEIARVRVFAIIYSKTVEEQS 701
Query: 687 FKAGIRRENGAFESLIRQKSFMMIP 711
+ +RRE AFE LI K M++P
Sbjct: 702 YLTSLRREKQAFELLIDTKRTMVVP 726
>gi|347968591|ref|XP_563334.4| AGAP002805-PA [Anopheles gambiae str. PEST]
gi|333467933|gb|EAL40837.4| AGAP002805-PA [Anopheles gambiae str. PEST]
Length = 1049
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 228/454 (50%), Gaps = 63/454 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + +LL LV+ + G++ + + ++L + + +L+++ S +
Sbjct: 52 LLEYEKQMFLDLLH--TDALVVCAKGITYERAMLNLLKIFCDTSTLVLVVNCSEAEEQYY 109
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
L + + S TA R Y G I F++ RIL+VDLL R+P + G+ +
Sbjct: 110 RTNLDHSEHIHESAKTA----AERERAYLQGGIQFISTRILVVDLLKNRIPIELITGMFV 165
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
+ H + E+ E F R+ + N+ +I+AFS A G+ E++M++LF+++L +W
Sbjct: 166 VRAHEIVESCQEAFALRLYRQRNKVGFIKAFSRNVEAFTYGYGHVEKVMRNLFVKELFIW 225
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLT 240
PRF + + L+ P VV++++PM++ M +Q +L++M+ +K ++ N+ V+++++T
Sbjct: 226 PRFHMTIQRSLKPYEPGVVEIQIPMTQNMILLQTNLLDLMNYLVKSIKTLNRFVELQEVT 285
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
VEN + K F +IL+ QLD IWH L +TK +V+DLK LR L+ + D+V++ L
Sbjct: 286 VENCVTKKFHKILQAQLDTIWHQLSSQTKLIVADLKVLRSLMISCLYGDSVSFYALLKRY 345
Query: 301 RVSES--FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
R +E S W +++ K+F AK+RV+ N
Sbjct: 346 RTTEYALHNSGWTILDAAEKVFTIAKERVF----------------------------NR 377
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLE-----EIEEE--RLKQASSREEVLLD 411
E+E E +PKWK L +VL +I+E+ ++++ R + +
Sbjct: 378 ENEFEP--------------ELSPKWKALSDVLRVDIPNDIKEKARKIRKQEERNKFM-- 421
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRNGSEKVM 445
+L+ C+D +C QL + G E+ +
Sbjct: 422 ---QQQVKILILCQDSRACYQLNQFLTQGPERYL 452
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 579 PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFY-----ALES 633
P D + MLE+ E V+ ++ + T + ++P+ + + L S
Sbjct: 606 PMDAADEQSSQFDVSMLESGVFESFVEMEQ-MDITTVVKESNRPLVFIQTFKSETSGLGS 664
Query: 634 DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPS---IKLKVYFLFYEDSTEVQKFKAG 690
L+ ++P IV+YH +++ +RQIEVY+A +++VY + + + E Q +
Sbjct: 665 LDRTLEQIRPRYIVMYHTNVTAIRQIEVYEARQQRQEMARVRVYAIIHSKTVEEQSYLTS 724
Query: 691 IRRENGAFESLIRQKSFMMIP 711
+RRE AFE LI K M++P
Sbjct: 725 LRREKQAFELLIETKRTMVVP 745
>gi|159465982|ref|XP_001691188.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279160|gb|EDP04921.1| predicted protein [Chlamydomonas reinhardtii]
Length = 633
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 190/340 (55%), Gaps = 62/340 (18%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNL--KSQII 62
+ + +I E +Q+ + L+I ++GL +++A LL ++ + + I
Sbjct: 37 YERQLIEECIQDDS--LIITAAGLGWQRVVA-----------VLLRIAQRARIAERQLIC 83
Query: 63 HYLAPNAPLLPS--EITADLPANHRHTLY----SSGQIFFVTPRILIVDLLTQRLPTSNL 116
LA + P LP +IT ++PA R LY + G+ F+TPRIL+VDLL +R+ +
Sbjct: 84 SELARHDPALPPPLDITNEVPAAERLALYGGGGAPGRPLFITPRILVVDLLARRVRAHQM 143
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIR 176
AGL++LN H T+ S E GFA E++MK+L
Sbjct: 144 AGLLLLNAHRATDTSGE----------------------------GFA-VEKVMKAL--- 171
Query: 177 KLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VD 235
Q V + L+ PVVV+ +S M IQ A+LEV++ ++E+++TNK +D
Sbjct: 172 --------QEQVRQCLDTHKPVVVEWEQELSGPMVLIQAALLEVLEGLIRELKRTNKSLD 223
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
+L +E G+ KSFDEI+RRQLDPIWH +G KT+++ +DL+TLR+L L+ D VT+L
Sbjct: 224 TSELVLEAGVLKSFDEIVRRQLDPIWHTVGWKTRRICTDLRTLRELSAVLLAVDPVTFLA 283
Query: 296 YLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDG 335
+L+ LR SE R VW+F ++++ +F+ A++RVY + + G
Sbjct: 284 HLEGLRQSEGVRCVWLFHDATHAVFEQARRRVYVYRQPGG 323
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 626 VHFYALES-DQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVY 674
VHF AL++ D+ +L L+P VI++Y PD++F+RQ A N + L VY
Sbjct: 383 VHFVALDAHDEFVLWRLRPGVIIMYEPDLAFLRQ----GALNADLWLDVY 428
>gi|332266498|ref|XP_003282244.1| PREDICTED: DNA repair endonuclease XPF-like [Nomascus leucogenys]
Length = 469
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 164/267 (61%), Gaps = 7/267 (2%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE + ++ ELL GLV+ + GL +L+ L LH +L+L++ P ++ I
Sbjct: 16 LECERQLVLELLD--TDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAVEEYFI 73
Query: 63 HYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL 122
+ L LP +T ++ +N R+ +YS G + F T RIL+VD LT R+P+ + G+++
Sbjct: 74 NQLKIGVEHLPRRVTNEITSNSRYEVYSQGGVIFATSRILVVDFLTDRIPSDLITGILVY 133
Query: 123 NTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP 182
H + E+ E FI R+ + N+ +I+AF+D A +GF ER+M++LF+RK LWP
Sbjct: 134 RAHRIIESCQEAFILRLFRQKNKCGFIKAFTDNAVAFDTGFCHVERVMRNLFVRK--LWP 191
Query: 183 RFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTV 241
RF V V+ LE+ P VV++ V ++ M +Q AIL++++ACLKE++ N ++VEDL++
Sbjct: 192 RFHVAVNSFLEQHKPEVVEIHVSVTLAMLAMQTAILDILNACLKELKCHNPSLEVEDLSL 251
Query: 242 ENGLFKSFDEILRRQLDPIWHI-LGKK 267
EN + K FD+++ R ++ I+ + GKK
Sbjct: 252 ENAIGKPFDKLVLR-INAIYEVRRGKK 277
>gi|294658416|ref|XP_460750.2| DEHA2F08932p [Debaryomyces hansenii CBS767]
gi|202953110|emb|CAG89091.2| DEHA2F08932p [Debaryomyces hansenii CBS767]
Length = 1089
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 180/689 (26%), Positives = 306/689 (44%), Gaps = 110/689 (15%)
Query: 80 LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRI 139
+ + R +Y +G I VT RIL+VDLL+ + +++ GL IL+ + E S E+FI +
Sbjct: 176 MTVDKRKRVYENGGIVSVTSRILVVDLLSGVVEPNDITGLFILHAEKVKETSNESFIINL 235
Query: 140 IKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS---------- 189
+ N +++A SD+P + +GF +K L + + LWPRF V VS
Sbjct: 236 YRDGNDWGFVKAVSDEPESF-TGFTPLATKLKVLRVSNVFLWPRFHVEVSSSLNFRGRNL 294
Query: 190 -----EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVEN 243
+ELER V ++ +S M IQ AIL + ACL E+++ N + E +EN
Sbjct: 295 PTRQKQELERR-RFVTEINTKLSYKMNKIQSAILSCIQACLSELKRHNPSLVTEYWDMEN 353
Query: 244 GLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL------ 297
F +R LD WH + +KQLV DL TL+ LL+YL+ D++++ + +
Sbjct: 354 IHDSDFVPRIRLSLDSSWHRISWTSKQLVYDLTTLKDLLNYLLTLDSLSFYQVVQEIIDS 413
Query: 298 -------DTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
DT+ V+ S W+ + + I YAK+R G + +SK G +
Sbjct: 414 NIKTTGNDTMNVAS--MSPWLNLDEANTIISYAKERAL------GKVMVSKSKITIGDE- 464
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLL 410
+VD + D + + E LEE PKW L ++++I E+ + +
Sbjct: 465 --SEVDEGNETDAHIHESEIQTE-EYNLEELPKWDQLGILIDDIMYEKSQNIA------- 514
Query: 411 DGEENDHGIVLVACKDECSCMQLEDCIRN------GSEKVMREEWEKYLLSK----VQLR 460
+HG +++ C D + QL I N S + R K++++K ++ +
Sbjct: 515 -----NHGPIVIMCSDSKTVKQLSYLISNMKDITISSSRRKRFSGRKFMVTKLNDYLEWK 569
Query: 461 SVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDD 520
+ ++K S+ LD +++++ E + E + SK ++GK
Sbjct: 570 EFTSLTRKLNSE-------LDMKKHEEVSEDNETERAATPEEE---LQTSKTFSRGKGHP 619
Query: 521 GDNPETYYGSK---GPGR---GRGKGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGS 574
G+ GR G KGRN NK + ++ +ED E S
Sbjct: 620 LSKRRRTRGASSVANVGRLYSGSTKGRNNEAVELDTAIVNKLKEDVNENQLEDNTE---S 676
Query: 575 GNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPP--------- 625
G+ D +GG L E++ Q K +D + + P
Sbjct: 677 GDFNSDDN--------AGGFL---IDEEQDQGKPVDISDLDDLNNVFECRPSEVIFENID 725
Query: 626 ------VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYE 679
+ Y +++ +L + P I++Y P++SF+R++E+Y+A N K YF++Y
Sbjct: 726 KDDQIIIETYNDKTNDSLLQEVSPAYIIMYEPNLSFIRRVEIYQAVNKESPAKTYFMYYG 785
Query: 680 DSTEVQKFKAGIRRENGAFESLIRQKSFM 708
S E QK I++E AF LIR+K+ +
Sbjct: 786 TSVEEQKHLMRIKKEKDAFTKLIREKATL 814
>gi|50547487|ref|XP_501213.1| YALI0B22242p [Yarrowia lipolytica]
gi|49647079|emb|CAG83466.1| YALI0B22242p [Yarrowia lipolytica CLIB122]
Length = 1039
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 177/326 (54%), Gaps = 49/326 (15%)
Query: 82 ANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIK 141
A+ R +Y +G +F +T R+LIVD+L + ++ ++ILN H TE S E FI R++K
Sbjct: 228 ASERTRMYRAGGVFSITSRVLIVDMLRGYIDVPQISAVVILNAHRATEASLEAFILRVMK 287
Query: 142 SLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREP----- 196
N A I+A SD+P + GF+ ++ K+LF++K LWPRF + V E L P
Sbjct: 288 QDNPWATIKALSDQPERFIRGFSPLTQMQKNLFVKKTRLWPRFHLKVKECLNGVPGRKPT 347
Query: 197 ---PVVVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKS---- 248
P VV+++ ++ M IQ +ILE++ C+ ++ RK VD+ED VEN L +S
Sbjct: 348 RGVPTVVELQCQLTPKMQQIQTSILELIGLCIGDIKRKVTSVDMEDWKVENLLDQSSSSA 407
Query: 249 -FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFR 307
FD++++RQL PIWH + T+++V D+ L+ LL L+ D +++ + L+ LR+S+
Sbjct: 408 FFDDLVQRQLSPIWHRIPPDTRKMVGDISALKALLQDLLTEDCISFFRQLELLRMSKGPE 467
Query: 308 SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSS 367
+ W+ E + +F+ AK RV+ R+D + N
Sbjct: 468 TPWLVTEDASNLFEAAKSRVH--ARTDPKDPNS--------------------------- 498
Query: 368 TSTKVVLEEVLEEAPKWKVLREVLEE 393
+++VLEE PKW+ L +++E
Sbjct: 499 ------IKKVLEELPKWRELAILVDE 518
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L+ L P I++Y P+ F R IE+Y N + VY L+Y S E Q F A +R+E A
Sbjct: 696 LEELGPSGIIMYQPNPEFFRTIEIY-GRNRKVAPNVYLLYYGLSYEEQAFLAAVRKEKDA 754
Query: 698 FESLIRQKSFM 708
F LI++++ M
Sbjct: 755 FSKLIKERAKM 765
>gi|367010004|ref|XP_003679503.1| hypothetical protein TDEL_0B01630 [Torulaspora delbrueckii]
gi|359747161|emb|CCE90292.1| hypothetical protein TDEL_0B01630 [Torulaspora delbrueckii]
Length = 1055
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 194/750 (25%), Positives = 341/750 (45%), Gaps = 134/750 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPS-------QGTLLLLSSS 54
L F + ++ L + L+I+ GLS+ L+A++L +L +P+ + +L+L++
Sbjct: 90 LAFQRQVVENALV-TDDPLIIMGRGLSMIALVANLLHVLSTPTNINGVSKRSLVLVLNAR 148
Query: 55 PNLKSQIIHYLAPNAPL----LPSE--------ITADLPA-NHRHTLYSSGQIFFVTPRI 101
PN I L L P + I+AD R LY SG IF VT RI
Sbjct: 149 PNDNLHIHEELQELQMLSNIDQPDDEQTRPFHVISADSQTLEKRRQLYLSGGIFSVTSRI 208
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
LIVDLL+ + + + G+++LN L + S E+FI + +S N+ +I+AFS+ P + V
Sbjct: 209 LIVDLLSGIVHPNKITGIVVLNAETLRDYSNESFILEMYRSKNKWGFIKAFSESPESFVM 268
Query: 162 GFAKTERIMKSLFIRKLHLWPRFQVNVSEEL----EREPPVVVDVRVPMSKYMGGIQKAI 217
F+ + MK L ++ + LWPRF+V +S+ L + V +V+V ++ M IQ +
Sbjct: 269 EFSPLMKKMKDLRLKNVLLWPRFRVEISKCLNTPNDSTNNKVFEVKVSLTNSMSQIQFGL 328
Query: 218 LEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLK 276
+ + C+ E+ RKT + +E ++N L +F + + + P WH + ++KQL+ D++
Sbjct: 329 IGCLKKCIAELSRKTPDLWLEWWNMDNALDMNFLKSIDSVMIPNWHRISFESKQLIKDIR 388
Query: 277 TLRKLLDYLVRYDAVTYLKYL------DTLRVSESF-RSVWIFAESSYKIFDYAKKRVYR 329
LR L+ LV DAV + + + + +S + S W+ A+ S + YAKKR++
Sbjct: 389 FLRNLMKLLVSGDAVDFYEEIQLSLEANKPSISRKYLESPWLMADESQMVISYAKKRIF- 447
Query: 330 FTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLRE 389
SDG E LE+ PKW+ L
Sbjct: 448 ---SDG---------------------------------------EYHLEDVPKWEQLIN 465
Query: 390 VLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEW 449
+L++I ++ + +E+L G L+ C + +C+QL + +K
Sbjct: 466 ILDDIAHQK-----ASKEIL--------GPTLIMCSNTRTCIQLARVLTVADKK---NGL 509
Query: 450 EKYLLSKVQLRSVQTSSKKK-----KSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDA 504
K +L K+Q Q +KK + KEP+ L+ A A+ A+ + A
Sbjct: 510 RKNMLRKLQHYKEQREERKKMVQEVREKEPERAAELNVSAA--FAKEQVATKRRRTRGAA 567
Query: 505 LLAAASKIRNQGKSDDGDNPETYYGSKG-----PGRGRGKGRNRNGPACVPQSANKDSKS 559
+AA K+R+ G +D +N Y K PG G+ ++G + + D+
Sbjct: 568 AVAAVEKLRSAGVGEDIENIIDDYNIKQELETMPGFEEGE---QDGFFAI----HNDNDM 620
Query: 560 NSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKD 619
++ ED+ E P + S + +++ KR+ + S D
Sbjct: 621 QAENYDEDE-----EVKETPFESFRSE-------------INRQIWEKRTEEFAYVSSGD 662
Query: 620 SKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYF-LFY 678
V F ++ SD L L P I++Y PD+ F+R++E+++A + I KV+F
Sbjct: 663 EIIVE--KFDSI-SDDTFLQELMPSFIIMYEPDLCFIRRVEIHRAIHREIPPKVFFSCIM 719
Query: 679 EDSTEVQKFKAGIRRENGAFESLIRQKSFM 708
++ + I++E AF LIR+ + +
Sbjct: 720 GIVSKSKGILLTIKKEKDAFTKLIREHAML 749
>gi|365987105|ref|XP_003670384.1| hypothetical protein NDAI_0E03240 [Naumovozyma dairenensis CBS 421]
gi|343769154|emb|CCD25141.1| hypothetical protein NDAI_0E03240 [Naumovozyma dairenensis CBS 421]
Length = 1091
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 166/643 (25%), Positives = 282/643 (43%), Gaps = 104/643 (16%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R LY +G I VT RILIVDLL+ L + + G+++LN L +S +FI I +S
Sbjct: 205 RRKLYLTGGIVSVTSRILIVDLLSGILHPNRVTGMVVLNAENLKTHSNVSFILEIYRSKY 264
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-------REPP 197
+ +I+AFS+ P + V F+ MK L ++ + LWPRF+V +S L
Sbjct: 265 QWGFIQAFSESPESFVMEFSPLFTKMKELGLKNVLLWPRFRVEISSCLNALSKSGSNNTN 324
Query: 198 VVVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQ 256
V++V+V ++ M IQ ++E + C++E+ RK ++ +E ++N L F +
Sbjct: 325 SVIEVKVSLTNSMSQIQFGLIECLKKCIEELNRKNPELSLEWWNIDNALDIKFLRSIDFI 384
Query: 257 LDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL------DTLRVSESF-RSV 309
+ P WH + ++KQLV D+K L+ LL DAV + + + + VS + S
Sbjct: 385 MIPNWHRISFESKQLVKDIKFLKNLLRTFFNADAVDFYENIQLSLEANKPSVSRKYTESP 444
Query: 310 WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTS 369
W+ A S + YAKKRV VDNNE
Sbjct: 445 WLMANESQLVISYAKKRV---------------------------VDNNEYS-------- 469
Query: 370 TKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECS 429
LEE PKW+ L +L++I ER + + G L+ C D +
Sbjct: 470 --------LEEMPKWEQLINILDDIAHERTTR-------------DVQGTTLIVCSDTST 508
Query: 430 CMQLEDCI-----RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVA 484
C+QL + +NG K M + +Y + + +++ ++ K +K + A
Sbjct: 509 CIQLSRILFNSDRKNGIRKFMLGKLNRYKSLREERKAIMLEAQSKDNKTNAELNVSAAFA 568
Query: 485 PVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNP-ETYYGSKGPGRGRGKGRNR 543
I + + +++AA ++R G +D + E Y + + G +
Sbjct: 569 KEDI-----ITKRRRTRGASVVAAVERLRTAGTGEDIETKIEDYDLEQELTKIHGTEYDV 623
Query: 544 NGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKE 603
+ D + A + K E E H GV E
Sbjct: 624 DLDEENLDEIKIDDIDSEFAVLPSKKE------EEILPAAHDGVT--------------E 663
Query: 604 VQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYK 663
WK ++ +++ K + F L D + +I+ P I+++ PD+SFVR++E+++
Sbjct: 664 ELWKERMENFEYINRN-KQIIIEKFSNLNDDASLEEIM-PSYIILFEPDLSFVRRVEIHR 721
Query: 664 AENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
A + ++ KVYF++Y DS E + I++E AF LIR+ +
Sbjct: 722 AIHMNLPPKVYFMYYGDSIEEKIHLTAIKKEKDAFTRLIRENA 764
>gi|345562923|gb|EGX45931.1| hypothetical protein AOL_s00112g120 [Arthrobotrys oligospora ATCC
24927]
Length = 904
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 243/493 (49%), Gaps = 88/493 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLK-SQI 61
L + Q + E + LV+++ GL L ++A++L + + +L+LL + L+ ++
Sbjct: 5 LTYQQEVFREAYHDDT--LVVMARGLGLCDIVANILHSYDATGRSLVLLVGASELENTRF 62
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRIL------------------I 103
LA A + + N R L + + V R L +
Sbjct: 63 GEQLAEKAAVSRT-------PNARGLLVINTNVSSVASRPLGPFKNSRSGRASCRKVTKL 115
Query: 104 VDLLTQRLPTSNL--AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
L T P++ L A L+ +T S E FI RI + N+ +++AFS++P S
Sbjct: 116 KKLSTYGTPSTGLKPAFADYLDDIRVTAISLEAFIIRIFRQKNKTGFVKAFSERPETFSS 175
Query: 162 GFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVM 221
GF+ IM++LF++K LWPR+ V V++ LE VV++ + M+ M IQ + L+ +
Sbjct: 176 GFSTLSTIMRNLFLQKTSLWPRYHVRVAQSLEARKAEVVELEISMTPAMQSIQNSALQCI 235
Query: 222 DACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRK 280
+ + E+RK N +D+ D +V++ L +SFD ++RRQL+P+WH + +T+Q+ SDL TLR
Sbjct: 236 EISISELRKVNLGLDIGDWSVDSALHRSFDILIRRQLEPVWHRVSPRTRQIASDLTTLRT 295
Query: 281 LLDYLVRYDAVTYLKYLDTLRVSES--------FRSVWIFAESSYKIFDYAKKRVYRFTR 332
+L L+ DAV++ +YL+T+ S + S W++ +++ +F A++RVY
Sbjct: 296 ILLNLLSLDAVSFHQYLETVLASNAPTNSLSTLGHSPWLYLDAADTLFSLARRRVY---- 351
Query: 333 SDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLE 392
TG K +D TS T +VLEE+ PKW VL +L+
Sbjct: 352 -------------TGSLP--KSLD-------PTSLIETGLVLEEL----PKWDVLLNILD 385
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGS---------EK 443
EI + +R+ L +N +G VL+ C D +C+Q+ + ++ S E+
Sbjct: 386 EIYQ-------NRQGCL---NKNKNGPVLIMCHDRQTCVQIAEYLQFASNLTPENDRQEQ 435
Query: 444 VMREEWEKYLLSK 456
RE KY+ K
Sbjct: 436 TGREYSSKYMRQK 448
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENP-SIKLKVYFLFYEDSTEV 684
+H Y+ +D +L+ ++P +++Y P+ SF+R IEVY++ + S ++ YF++Y S E
Sbjct: 557 IHPYS-AADDSLLEEIQPQDVIMYSPNASFIRHIEVYRSSHSNSNDIRAYFMYYGCSVEE 615
Query: 685 QKFKAGIRRENGAFESLIRQKSFM 708
Q + + +R+E AF +LIRQKS M
Sbjct: 616 QTYLSTVRKEKDAFTNLIRQKSSM 639
>gi|410082253|ref|XP_003958705.1| hypothetical protein KAFR_0H01600 [Kazachstania africana CBS 2517]
gi|372465294|emb|CCF59570.1| hypothetical protein KAFR_0H01600 [Kazachstania africana CBS 2517]
Length = 1079
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 186/758 (24%), Positives = 340/758 (44%), Gaps = 131/758 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPS-------QGTLLLLSSS 54
L F Q ++ L + LVI+ GL + ++A++ +L +P+ + +++L+++
Sbjct: 99 LPFQQKVVESCLVS-DDPLVIMGKGLGMANVVANLTHVLATPTIIDGQIKRSLVIILNAT 157
Query: 55 PNLKSQI------IHYLAPN------APLLPSEITADLPAN----------HRHTLYSSG 92
N QI + +L+ N +E D P N R LY SG
Sbjct: 158 ANDNRQIGEELRELSWLSSNNVDDATGFREQNEDAEDRPFNVVTAESSSVEKRRKLYLSG 217
Query: 93 QIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAF 152
VT RILIVDLL+ L + + G+I+LN +L S E+FI I +S N+ +I+ F
Sbjct: 218 GTVSVTSRILIVDLLSGILHPNKITGMIVLNVESLRSYSNESFILEIYRSQNKWGFIKGF 277
Query: 153 SDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE---REPPVVVDVRVPMSKY 209
S+ P F+ R M+ L + + LWPRF+V VS L ++ V++V+V ++
Sbjct: 278 SESPEPFTMEFSPLMRRMRELRFKNILLWPRFRVEVSNTLNPVAQQSNKVIEVKVSLTDS 337
Query: 210 MGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKT 268
M IQ ++E + C+ E+ RK + +E + N L K F + + + P WH + ++
Sbjct: 338 MAQIQFGLMECLKKCIGELNRKNPGLSLEWWDINNVLDKYFLKSIDSVMMPNWHRISFES 397
Query: 269 KQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSESFR---SVWIFAESSYKIFD 321
KQLV D++ L++LL L++ DAV + + LD + S + + S W+ AE S +
Sbjct: 398 KQLVKDIRFLKRLLKLLIKADAVDFYEEIQLSLDANKPSITHKYTESPWLMAEESQLVIS 457
Query: 322 YAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEA 381
+A+KR+Y E +LEEA
Sbjct: 458 HARKRIYYKD-------------------------------------------EYILEEA 474
Query: 382 PKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGS 441
PKW+ L +L++I +RL + S G + C ++ + QL + +
Sbjct: 475 PKWEQLVRILDDISHQRLTKGFS-------------GPTCIVCSEKSTAAQLTKIVHSAD 521
Query: 442 EKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQN-AEASSVSKQ 500
+K + + K +L K++L + + K+ K+ K + ++ A+ ++K+
Sbjct: 522 KK---DGFRKNMLKKLKLYKDRREASKQLVKQVKEKDSDSLQRELNVSTTFAKEQPITKR 578
Query: 501 EHD---ALLAAASKIRNQGKSDDGDNP-ETYYGSKGPGRGRGKGRNRNG-----PACVPQ 551
A +AA ++R+ G +D ++ ++Y + GR R G +G P
Sbjct: 579 RRTRGAAAVAAVERLRSSGGGEDIESVIDSYNPEQELGRTRNDGYEEDGDSFEEPDDELL 638
Query: 552 SANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLK 611
+ +++ +E K + E E + ++ G+ E W +
Sbjct: 639 ITDIIDSQDTELYLEQKYIV-----EPEEQEYYKTTPSFTSGLTEDI-------WNERID 686
Query: 612 TDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKA---ENPS 668
+ ++ + + + + D L P I+++ PD+SF+R++E+Y+A ENP
Sbjct: 687 NFSYVERNEQVI--IETFGNIIDDSFLQETMPSYIIMFEPDLSFIRKVELYRAIQKENPP 744
Query: 669 IKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
K++F++Y +S E Q I+RE AF LI++ +
Sbjct: 745 ---KIFFMYYGESVEEQGHLLAIKREKDAFTKLIKENA 779
>gi|391337063|ref|XP_003742893.1| PREDICTED: DNA repair endonuclease XPF-like [Metaseiulus
occidentalis]
Length = 819
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 229/455 (50%), Gaps = 57/455 (12%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L++ Q + +++ L+I + GL L + +++ ++ + +++L + P+ + I
Sbjct: 22 LLKYQQEALTDIVD--RDALLITARGLGLHSIFHALIRVYHAPENLVIILGTEPDQEVYI 79
Query: 62 IHYLAPNA-PLLPSEITAD-LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L +P IT+D N R LY G + FVT RILI DLL +R+P ++ G
Sbjct: 80 KARLEKGGMKNMPKWITSDAFDTNARTKLYKEGGVLFVTSRILIGDLLNERIPIEHVTGF 139
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH 179
I+ N + + + FI R+ + NR +++A S K A F + R+M L++R L
Sbjct: 140 IVNNAETVQNSQQDLFILRLYRDKNRTGFVKALSSKAPAFTQEFMQLTRVMSRLYVRHLI 199
Query: 180 LWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVED 238
L+PRF +V E L E V + VP+++ M IQ A++++++ +++++K N+ +++++
Sbjct: 200 LYPRFHESVKESLN-ESLEVYETYVPLTQSMEQIQFALMDLIEISIRDIKKLNQTLNIDE 258
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
T N + KSF ++ +DP WH+L KT++ + DLK L+KL+D L +YD VT+
Sbjct: 259 FTTANVMGKSFYATMKTCIDPQWHLLSGKTRRSIGDLKNLKKLMDGLTKYDPVTFF---- 314
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
S +SVW + ++ D+ T D +G+S + +KR KV+
Sbjct: 315 -----HSVKSVWHAKQGCHQTADW--------TLMD----SGESLYLAAEKRVFAKVE-- 355
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
GT K EV PKW L EVL+ + + G
Sbjct: 356 -----GTKKDREKEFKPEV---PPKWISLIEVLKNCDSK--------------------G 387
Query: 419 IVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
+++ ++E + QLE+ + GS +V+R ++K L
Sbjct: 388 NIVIVVEEERTRRQLEEFLCVGSYRVLRSAFQKLL 422
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
+P +V++ +S VR +E+Y + + VY + Y S + Q++ +R+E AF +L
Sbjct: 503 RPLSVVLFDLHLSTVRTLEIYHNLSTQSGVTVYTITYAKSVDEQRYYTSVRKEKEAFANL 562
Query: 702 IRQKSFMMIPID 713
I++K+ M D
Sbjct: 563 IQEKAAMASKTD 574
>gi|224002330|ref|XP_002290837.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974259|gb|EED92589.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 3340
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 209/433 (48%), Gaps = 82/433 (18%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
LP+ IT + A R +LY+ G +F +T RILIVDLL N+ G+++ + +TE S
Sbjct: 1651 LPTIITTESQAKERSSLYARGGLFIITSRILIVDLLNGVANARNIEGMLVAHAEKVTEES 1710
Query: 132 TETFICRII------------------KSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
TE FI RI K+ + +I+AF+D P+A+V GFAK ++I+KSL
Sbjct: 1711 TEAFILRIYRGQKYFMESKVAESADYDKNRSSRGFIKAFTDDPSALVRGFAKVDKILKSL 1770
Query: 174 FIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR-KTN 232
+ KL+L+PRF V ++LER PP+V ++ P+S M +Q+AI V+ AC +++R K
Sbjct: 1771 HVPKLYLYPRFHAAVVQDLERNPPIVEELHQPLSDSMIKVQEAICAVVRACCRDLREKAP 1830
Query: 233 KVDVEDLT------VENG----------LFKSFDEILRRQLDPIWHILGKKTKQLV-SDL 275
+D+ LT V G + +FD ++ RQ+ WH L + K L+ +DL
Sbjct: 1831 GIDLSMLTKDKTGNVGKGKDLDIDYKKLVTVNFDLLISRQVQSSWHTLSPEVKSLITTDL 1890
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSE-SFRSVWIFAESSYKIFDYAKKRVYRFTRSD 334
LR+LL +L+ +D+ ++ + L+ ++ +S WI +F AK R+Y +
Sbjct: 1891 TKLRQLLYHLLHFDSFSFWRTLEAIKARNIEKKSNWIVNRVGENLFQRAKDRLYTINDRN 1950
Query: 335 GVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEI 394
G KK LK N PK +++++VL EI
Sbjct: 1951 G-----------SKKLALKHDVN------------------------PKERLVQQVLTEI 1975
Query: 395 EEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL- 453
+ ++ +E + G VL+ KD + L + G ++ M +W ++L
Sbjct: 1976 QNRWTEKMERSQEGTVQS-----GTVLIMVKDGYTLDSLNSYLSKGEKRSMDLKWYQHLK 2030
Query: 454 ----LSKVQLRSV 462
SK L S+
Sbjct: 2031 IVNEKSKTMLNSI 2043
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSI----KLKVYFLFYEDSTEVQKFKAGIR 692
+L L P +++ SF+R +E+Y ++ +L+V+FL YE S E+ F +
Sbjct: 2191 VLRDLSPSYVIMVDSSPSFIRSLEIYSNGMDNVPKEDRLRVFFLLYEHSAELHNFIHTLD 2250
Query: 693 RENGAFESLIRQKSFM 708
RE AF+ LI K M
Sbjct: 2251 REKEAFDRLIDHKKRM 2266
>gi|260789335|ref|XP_002589702.1| hypothetical protein BRAFLDRAFT_184972 [Branchiostoma floridae]
gi|229274884|gb|EEN45713.1| hypothetical protein BRAFLDRAFT_184972 [Branchiostoma floridae]
Length = 233
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 146/234 (62%), Gaps = 4/234 (1%)
Query: 22 VILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL--APNAPLLPSEITAD 79
V+ GL +++ + L L+ +++++++ + +I L A +PL P +T +
Sbjct: 1 VVCYRGLGADRVLLNYLQLYCEDSNLVIVINTTQQEEEYLIEELSVAGVSPL-PKSVTNE 59
Query: 80 LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRI 139
N R LY SG + FVT RIL+VD+LT R+P + + G+++ H + E+ E FI R+
Sbjct: 60 YSINDRKALYLSGGVLFVTSRILVVDMLTDRIPVNLITGVLVYRAHRIIESCQEAFILRL 119
Query: 140 IKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVV 199
+ N++ +I+AFSD PTA SG + ER+MK+LF+RKL+LWPRF ++ + L + P V
Sbjct: 120 YRQKNKQGFIKAFSDTPTAFHSGMCQVERVMKNLFVRKLYLWPRFHASIQDFLSQHKPEV 179
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEI 252
V++ + M+ M IQ AIL++M AC++E+R N ++ EDLTVEN + +FD +
Sbjct: 180 VELHLHMTDAMTAIQTAILDIMQACVRELRAFNPSLEAEDLTVENAISLTFDHV 233
>gi|58270400|ref|XP_572356.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|58270402|ref|XP_572357.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228614|gb|AAW45049.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228615|gb|AAW45050.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1099
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 184/342 (53%), Gaps = 15/342 (4%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L FH+++I L + L++++ GL L +++ ++L + + +L++ ++P ++ I
Sbjct: 12 LPFHKNLIRTLCRPQQDDLLLIAKGLGLRRIVCALLKTYDRKEDLVLVVGATPADEAGIG 71
Query: 63 HYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P + ++ R +Y G +F VT +IL+ DLL +P + GL+
Sbjct: 72 DELGIMGVRDPGFRVVGYEMSVKEREEMYRHGGLFSVTSKILVNDLLKGTVPVKLITGLV 131
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
IL+ ++ S E F R+ + N+ + +AFSD+P G + ++ +L + + +
Sbjct: 132 ILHAERISHGSQEEFAVRLFRRENQSGFCKAFSDEPEVFAHGMSPLRDMLINLNMTSVLI 191
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--KVDVED 238
WPRF V +L VV++ VPM+ M Q AI E M+A L E+++ + +D+ED
Sbjct: 192 WPRFNEVVKVDLSSRRADVVEMYVPMTDLMRHCQDAITECMEAMLVELKRDHSLNLDLED 251
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ V N FK+FD I+R +L P+WH +G KTK V+ L LR L +L+ YD+ T+ Y++
Sbjct: 252 INVRNAQFKNFDTIVRMKLKPVWHKVGAKTKIHVAALTELRNLHTWLLEYDSATFASYIN 311
Query: 299 TLR---------VSESFRSV--WIFAESSYKIFDYAKKRVYR 329
TL+ + + R + W A+++ ++ + ++ RV R
Sbjct: 312 TLQRQHFQAERLTTGAGRHIHDWFNAKAASQLVEASQARVSR 353
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y E D +L L+P +V+Y P+++F+R++EVY+ NP + L+VY + Y +S E +F
Sbjct: 744 YGGEDDDILLQELRPRFVVMYEPNLAFIRRLEVYRNCNPGLSLRVYQMIYTNSFEEDRFL 803
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
+ I+RE AF+ LI + M+IPI
Sbjct: 804 STIQREAEAFKKLIDDRQSMVIPI 827
>gi|134117864|ref|XP_772313.1| hypothetical protein CNBL1810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254926|gb|EAL17666.1| hypothetical protein CNBL1810 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1099
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 184/342 (53%), Gaps = 15/342 (4%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L FH+++I L + L++++ GL L +++ ++L + + +L++ ++P ++ I
Sbjct: 12 LPFHKNLIRTLCRPQQDDLLLIAKGLGLRRIVCALLKTYDRKEDLVLVVGATPADEAGIG 71
Query: 63 HYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P + ++ R +Y G +F VT +IL+ DLL +P + GL+
Sbjct: 72 DELGIMGVRDPGFRVVGYEMSVKEREEMYRHGGLFSVTSKILVNDLLKGTVPVKLITGLV 131
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
IL+ ++ S E F R+ + N+ + +AFSD+P G + ++ +L + + +
Sbjct: 132 ILHAERISHGSQEEFAVRLFRRENQSGFCKAFSDEPEVFAHGMSPLRDMLINLNMTSVLI 191
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--KVDVED 238
WPRF V +L VV++ VPM+ M Q AI E M+A L E+++ + +D+ED
Sbjct: 192 WPRFNEVVKVDLSSRRADVVEMYVPMTDLMRQCQDAITECMEAMLVELKRDHSLNLDLED 251
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ V N FK+FD I+R +L P+WH +G KTK V+ L LR L +L+ YD+ T+ Y++
Sbjct: 252 INVRNAQFKNFDTIVRMKLKPVWHKVGAKTKIHVAALTELRNLHTWLLEYDSATFASYIN 311
Query: 299 TLR---------VSESFRSV--WIFAESSYKIFDYAKKRVYR 329
TL+ + + R + W A+++ ++ + ++ RV R
Sbjct: 312 TLQRQHFQAERLTTGAGRHIHDWFNAKAASQLVEASQARVSR 353
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 155/389 (39%), Gaps = 76/389 (19%)
Query: 360 DEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGI 419
D+ G + K E VLEE PKW VL +VL+EIE+ S + I
Sbjct: 479 DDLGRSVEKRLKKGYEAVLEEQPKWSVLAKVLKEIEDTIASVQVSHADT------PGTNI 532
Query: 420 VLVACKDECSCMQLEDCIRNGSE-------KVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
+LV + +C+QL + S R+ E LS Q +K+
Sbjct: 533 ILVMTSSDRTCLQLRQYLTTMSRTDPPFGPNAGRKMMESLFLSNWQ---------HEKNG 583
Query: 473 EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKG 532
E G + + + + D +IR +G + E +
Sbjct: 584 EKLG---------------SAGTGMHRSNED-------EIRVRGDIESKRVEEQRRAERT 621
Query: 533 PGRGRG----KGRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVV 588
GRGRG K R + G A P + + K A+ K + +G E D +
Sbjct: 622 RGRGRGVPSYKRRRQRGGAAAPAPRLAEMEKEHKEAMM-KAHSAFAGGENDEDTQMQWAL 680
Query: 589 G-------------YSGGMLETAFVE--------KEVQWKRSLKTDTAESKDSKPVPP-- 625
G S G+L+ ++ E Q+ L + E P
Sbjct: 681 GESLSSSDPSSALLASTGILDEDDLQPVSGSQTIAEAQY--GLLPENFEEAYGLIAPEDA 738
Query: 626 --VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTE 683
+ Y E D +L L+P +V+Y P+++F+R++EVY+ NP + L+VY + Y +S E
Sbjct: 739 VIIRPYGGEDDDILLQELRPRFVVMYEPNLAFIRRLEVYRNCNPGLSLRVYQMIYTNSFE 798
Query: 684 VQKFKAGIRRENGAFESLIRQKSFMMIPI 712
+F + I+RE AF+ LI + M+IPI
Sbjct: 799 EDRFLSTIQREAEAFKKLIDDRQSMVIPI 827
>gi|321264616|ref|XP_003197025.1| single-stranded DNA endonuclease; Rad1p [Cryptococcus gattii WM276]
gi|317463503|gb|ADV25238.1| Single-stranded DNA endonuclease, putative; Rad1p [Cryptococcus
gattii WM276]
Length = 1112
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 184/342 (53%), Gaps = 15/342 (4%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L FH+++I L + L++++ GL L +++ ++L + + +L++ ++P ++ I
Sbjct: 12 LPFHKNLIRTLCRPQQDDLLLIAKGLGLRRIVCALLKTYDRKEDLVLVVGATPADEAGIG 71
Query: 63 HYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P + ++ R +Y G +F VT +IL+ DLL LP + GL+
Sbjct: 72 DELGIMGVRDPGFRVVRYEMSVKERDEMYRHGGLFSVTSKILVNDLLKGTLPVKLITGLV 131
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
IL+ ++ S E F R+ + N+ + +AFSD+P A G + ++ +L + + +
Sbjct: 132 ILHAERISHGSQEEFAVRLYRRENQSGFCKAFSDEPEAFAHGMSPLRDMLINLNMTSVLI 191
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--KVDVED 238
WPRF V +L VV++ VPM+ M Q AI E M+A L E+++ + +D+ED
Sbjct: 192 WPRFNEVVKVDLSSRRADVVEMYVPMTDLMRQCQDAITECMEAMLVELKRDHSLNLDLED 251
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ V N FK+FD I+R +L +WH +G KTK V+ L LR L +L+ YD+ T+ Y++
Sbjct: 252 INVRNAQFKNFDTIVRMRLKTVWHKVGAKTKIHVAALTELRNLHTWLLEYDSATFASYIN 311
Query: 299 TLR---------VSESFRSV--WIFAESSYKIFDYAKKRVYR 329
TL+ + + R + W A+++ ++ + ++ R+ R
Sbjct: 312 TLQRQHFQAEKLTTGAGRHIHDWFNAKAASQLVEASQARISR 353
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ Y E D +L L+P +V+Y P++ F+R++EVY+ NP + L+VY + Y +S E
Sbjct: 754 IRSYGGEDDDILLQELRPRFVVMYEPNLPFIRRLEVYRNCNPGLSLRVYQMIYTNSFEED 813
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
+F + I+RE AF+ LI + M+IPI
Sbjct: 814 RFLSTIQREAEAFKKLIDDRQSMVIPI 840
>gi|45198974|ref|NP_986003.1| AFR456Cp [Ashbya gossypii ATCC 10895]
gi|44985049|gb|AAS53827.1| AFR456Cp [Ashbya gossypii ATCC 10895]
Length = 1015
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 235/486 (48%), Gaps = 84/486 (17%)
Query: 7 QHIIAELLQEPNGGLVILSSGLSLPKLIASVL--------LLHSPSQGTLLLLSSSPNLK 58
Q II E L+I++ GL ++++++L + +S + +LLL++S +
Sbjct: 77 QQIIVENTLISEDCLLIMAMGLGTIQVVSNLLHVLATPVRIKNSDKRSLVLLLNASDDDN 136
Query: 59 SQI------IHYLAPNAPLLPSEI--TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQR 110
++ + +LA +A P I + R +YSSG I VT RILIVD+L+
Sbjct: 137 RRMEDELMELSWLAADATDRPFVIINSDSHSIAQRTEVYSSGGIISVTSRILIVDMLSGI 196
Query: 111 LPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIM 170
+ + + GL I++ LT STE+FI I + NR +I+A ++ P ++V+ F+ R M
Sbjct: 197 IHPNVVTGLFIMHADLLTNYSTESFIVDIYREHNRWGFIKAVTESPESLVTDFSPLLRKM 256
Query: 171 KSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM- 228
+ L +R++ LWPRF +VS L ++ VV+++V ++ M I +LE + C+ E+
Sbjct: 257 RDLKLRRILLWPRFHADVSSSLHAQKNNTVVEIKVSLTDSMEKIHYGLLECLKKCINELV 316
Query: 229 RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
RK ++ E ++EN L F + + +L P WH + ++KQLV D+ TLRKLL LV Y
Sbjct: 317 RKVPELAKESWSIENALDAHFMKSIHAELQPRWHRISYESKQLVKDISTLRKLLHALVSY 376
Query: 289 DAVTYLKYLDTL------RVSESF-RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
DAV + + + + +S + S W+ A S + Y+KKRVY
Sbjct: 377 DAVDFYELIRVILDANKPSISRKYSESPWLLAAESQLVISYSKKRVYH------------ 424
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
++E E LEE PKW+ L +L++I ER+ +
Sbjct: 425 ---------------DDEYE----------------LEEQPKWEQLISLLDDISYERMAK 453
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI-----RNGSEKVMREEWEKYLLSK 456
+ G ++ C DE + QL + + G+ K+M + + Y+ +
Sbjct: 454 PHTYT-----------GPTVIICSDERTRQQLGRILSYYNSKEGNRKMMIRKLQSYIRHR 502
Query: 457 VQLRSV 462
Q++S
Sbjct: 503 DQVQST 508
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
+Y +++ + ++L FVI+ Y P++SF+RQ+EVY+A + + +K+YF++Y +S E Q
Sbjct: 641 YYHKDTESLLYELLPSFVIM-YEPNLSFIRQVEVYRATHTNKYIKIYFMYYGESVEEQAH 699
Query: 688 KAGIRRENGAFESLIRQKS 706
I++E AF LIR+ +
Sbjct: 700 LLNIKKEREAFTKLIRENA 718
>gi|190345504|gb|EDK37401.2| hypothetical protein PGUG_01499 [Meyerozyma guilliermondii ATCC
6260]
Length = 1020
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 169/663 (25%), Positives = 286/663 (43%), Gaps = 116/663 (17%)
Query: 82 ANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIK 141
A+ R LY G + VT R+L VD+L+ + + + GL+I++ + E S E+FI + +
Sbjct: 159 ADKRRRLYDKGGVVSVTSRVLAVDMLSGVIKCNEITGLLIVHAETMKEASNESFIVNLYR 218
Query: 142 SLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER------- 194
N +++A SD+P + +GF +K L + + LWPRF V VS L+
Sbjct: 219 DENDWGFVKAISDEPESF-TGFTPLATSLKVLRLTNVFLWPRFHVEVSSSLQARKKGSKD 277
Query: 195 EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEIL 253
+ V+++ MS M IQ AIL ++ACL E+++ N + E +EN + F +
Sbjct: 278 DRRSVIEINTKMSYKMKKIQAAILACIEACLNELKRHNGSLATEYWDMENVHDRDFVPRI 337
Query: 254 RRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL------------R 301
R LD WH + +KQL+ DL TL+ L +L+ D++ + + + +
Sbjct: 338 RMALDSQWHRITYTSKQLIYDLGTLKDFLKHLLSSDSLKFYQTVQNIIDSNVKSKTGTGA 397
Query: 302 VSESFRSVWIFAESSYKIFDYAKKRV---YRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
+S + S W+ E + I +AK+R R RS L Q +S+
Sbjct: 398 LSTTTISPWLNLEEATTIISFAKERALGKLRIERSKTT-LEEQDESL------------- 443
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
E+ G ST E LE PKW L +L++I E+ + ++
Sbjct: 444 EELTPGHISTHE----EYNLESQPKWGQLGLLLDDIMHEKAILGNVQQP----------- 488
Query: 419 IVLVACKDECSCMQLEDCI------RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
+L+ C D + QL + NG K+ KY++ ++
Sbjct: 489 -ILIMCSDLSTTRQLAQLLPILELKDNGGRKIFSA--RKYMIRRLN-------------- 531
Query: 473 EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPE--TYYGS 530
D +A E S ++KQ + L + K +D D+ E Y S
Sbjct: 532 --------DYLAW------KELSRLTKQINTEL---------EVKEEDTDSKEDDDIYTS 568
Query: 531 KGPGRGRGK---GRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGV 587
K RGRG+ R R A S + S I + P++ + E+
Sbjct: 569 KTFSRGRGEPISKRRRTRGASTVASVTRLHSSAGSNQISEAPDLDPVIVDNLKREVSDED 628
Query: 588 VGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALE----SDQPILDILKP 643
V SGG EV + + ++ + ++ + + + +E ++ + L P
Sbjct: 629 VLESGGF--------EVNDEIYVDENSTQRQEIEHISQMDQIVIENYHGNNNDFIQELSP 680
Query: 644 FVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIR 703
I++Y P++ F+R +E+Y+A N K YF++Y S E QK I++E AF LIR
Sbjct: 681 SHIIMYEPNLPFIRAVEIYQAINKDTPAKTYFMYYGTSVEEQKHLMQIKKEKDAFTRLIR 740
Query: 704 QKS 706
+K+
Sbjct: 741 EKA 743
>gi|448089397|ref|XP_004196796.1| Piso0_004021 [Millerozyma farinosa CBS 7064]
gi|448093668|ref|XP_004197827.1| Piso0_004021 [Millerozyma farinosa CBS 7064]
gi|359378218|emb|CCE84477.1| Piso0_004021 [Millerozyma farinosa CBS 7064]
gi|359379249|emb|CCE83446.1| Piso0_004021 [Millerozyma farinosa CBS 7064]
Length = 1068
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 172/683 (25%), Positives = 299/683 (43%), Gaps = 109/683 (15%)
Query: 68 NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHAL 127
N+P + + + + R +Y+SG + VTPRIL+VD+L+ + + G+ +L+ +
Sbjct: 174 NSPPITTIVGETSNIDKRSKIYNSGGLVSVTPRILLVDILSGVVIPEKITGIFLLHAERI 233
Query: 128 TENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVN 187
E S + FI + + N +I+A SD + V GF+ +K+L I + LWPRF +
Sbjct: 234 KETSNDCFIINLYRDRNEWGFIKAVSDDAESFV-GFSPLATRLKNLRIHDVFLWPRFHLE 292
Query: 188 VSEELE--------------REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN- 232
+S L R+ V ++ V +S M IQ AI+ ++ACL E+++ N
Sbjct: 293 ISASLNFTGKNLISREKEELRKAHHVTEINVKLSYKMNKIQAAIMSCLNACLMELKRHNP 352
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
+ E +EN F +R LDP WH + +KQLV DL TL+ LL LV D++T
Sbjct: 353 SLATEYWDIENIHDSDFIMRIRLSLDPQWHRISWTSKQLVYDLSTLKDLLADLVTLDSLT 412
Query: 293 Y-----------LKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
+ +K + ++ S S W+ + + I YA++R
Sbjct: 413 FYQCVQEIIDQNVKSTNAGTMNISSMSPWLNLDEANTIISYARER--------------- 457
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
++ +K ++ + + E ED + E +LEE PKW+ L +L++I E++K
Sbjct: 458 --ALGKRKVSVENIADTEKEDNKSDYEHE----EYILEELPKWEQLGFLLDDIIFEKMKS 511
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRS 461
S+ +L+ C + QL D I SE
Sbjct: 512 NST------------DSPILIMCSNNRVARQLRDLISLMSES------------------ 541
Query: 462 VQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDG 521
T +K + +LD K E ++++K+ ++ + Q + +
Sbjct: 542 -NTDDRKTINGRKYMVKLLDDYITWK-----EFTNLAKKLNNEFNIKKEETE-QVEDETE 594
Query: 522 DNPETYYGSKGPGRGRG----KGRNRNGPACVPQSANKDSKSNSKAAIEDKP-EISGSGN 576
+ E SK RG+G K R G A V S +N AA + P EI +
Sbjct: 595 ETKEELIMSKTFSRGKGFPLSKRRRTRGAAAVANVGKLYSGTN--AATNNNPVEI----D 648
Query: 577 EGPADEIHSGVVGY-----------SGGMLETAFVEKEVQ--WKRSLKTDTAESKDSKPV 623
E +++ S G ++E ++E Q +R + + E D
Sbjct: 649 EAIFEKLKSNNNEDADDDNELNENDGGFIVEDNPDDREAQIIHERDIDENFLEYVDQGDQ 708
Query: 624 PPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTE 683
+ Y ++ +L L P I+++ P++SF+R+IE+Y++ N +VYF++Y S E
Sbjct: 709 IIIETYNSRTNDTLLQSLGPSHIIMFDPNLSFIRRIEIYQSINRYSPARVYFMYYGSSIE 768
Query: 684 VQKFKAGIRRENGAFESLIRQKS 706
QK I+RE +F LI++++
Sbjct: 769 EQKHLQEIKREKESFTKLIKERA 791
>gi|374109233|gb|AEY98139.1| FAFR456Cp [Ashbya gossypii FDAG1]
Length = 1017
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 234/486 (48%), Gaps = 84/486 (17%)
Query: 7 QHIIAELLQEPNGGLVILSSGLSLPKLIASVL--------LLHSPSQGTLLLLSSSPNLK 58
Q II E L+I++ GL +++++L + +S + +LLL++S +
Sbjct: 77 QQIIVENTLISEDCLLIMAMGLGTIPVVSNLLHVLATPVRIKNSDKRSLVLLLNASDDDN 136
Query: 59 SQI------IHYLAPNAPLLPSEI--TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQR 110
++ + +LA +A P I + R +YSSG I VT RILIVD+L+
Sbjct: 137 RRMEDELMELSWLAADATDRPFVIINSDSHSIAQRTEVYSSGGIISVTSRILIVDMLSGI 196
Query: 111 LPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIM 170
+ + + GL I++ LT STE+FI I + NR +I+A ++ P ++V+ F+ R M
Sbjct: 197 IHPNVVTGLFIMHADLLTNYSTESFIVDIYREHNRWGFIKAVTESPESLVTDFSPLLRKM 256
Query: 171 KSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM- 228
+ L +R++ LWPRF +VS L ++ VV+++V ++ M I +LE + C+ E+
Sbjct: 257 RDLKLRRILLWPRFHADVSSSLHAQKNNTVVEIKVSLTDSMEKIHYGLLECLKKCINELV 316
Query: 229 RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRY 288
RK ++ E ++EN L F + + +L P WH + ++KQLV D+ TLRKLL LV Y
Sbjct: 317 RKVPELAKESWSIENALDAHFMKSIHAELQPRWHRISYESKQLVKDISTLRKLLHALVSY 376
Query: 289 DAVTYLKYLDTL------RVSESF-RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQ 341
DAV + + + + +S + S W+ A S + Y+KKRVY
Sbjct: 377 DAVDFYELIRVILDANKPSISRKYSESPWLLAAESQLVISYSKKRVYH------------ 424
Query: 342 SKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQ 401
++E E LEE PKW+ L +L++I ER+ +
Sbjct: 425 ---------------DDEYE----------------LEEQPKWEQLISLLDDISYERMAK 453
Query: 402 ASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCI-----RNGSEKVMREEWEKYLLSK 456
+ G ++ C DE + QL + + G+ K+M + + Y+ +
Sbjct: 454 PHTYT-----------GPTVIICSDERTRQQLGRILSYYNSKEGNRKMMIRKLQSYIRHR 502
Query: 457 VQLRSV 462
Q++S
Sbjct: 503 DQVQST 508
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 628 FYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKF 687
+Y +++ + ++L FVI+ Y P++SF+RQ+EVY+A + + +K+YF++Y +S E Q
Sbjct: 641 YYHKDTESLLYELLPSFVIM-YEPNLSFIRQVEVYRATHTNKYIKIYFMYYGESVEEQAH 699
Query: 688 KAGIRRENGAFESLIRQKS 706
I++E AF LIR+ +
Sbjct: 700 LLNIKKEREAFTKLIRENA 718
>gi|392575996|gb|EIW69128.1| hypothetical protein TREMEDRAFT_62855 [Tremella mesenterica DSM
1558]
Length = 1093
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 166/303 (54%), Gaps = 4/303 (1%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L FH+ II E+ + L+IL+ GL L ++I ++L + + +L+++++P ++ I
Sbjct: 14 LSFHKTIIREICRPQKDDLLILAKGLGLRRIICALLKTYDRKEDLVLVVNATPADEAGIG 73
Query: 63 HYLAPNAPLLPSE--ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P +T ++ R LY G +F VT +IL+ DLL +P + GL+
Sbjct: 74 DELGIMGVRDPGFRILTYEMSIREREELYRHGGLFSVTSKILVNDLLKGTVPAKLVTGLV 133
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
IL+ ++ S E F R+ + N+ + +AFSD+P G + ++ +L + + +
Sbjct: 134 ILHAERVSHGSQEEFAVRLYRRENQSGFCKAFSDEPEMFAHGMSPLRDMLINLNMNSVTI 193
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--KVDVED 238
WPR+ V L VV++ PM+ M Q AI E M+A L E+++ + +D+ED
Sbjct: 194 WPRYNEAVKLALTTRQAEVVEMYQPMTDLMRQCQDAITECMEAMLVELKRDHSLNLDLED 253
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
L V N FK+FD I+R +L +WH +G KT+ V+ L LR L +L+ YD+ T+ Y++
Sbjct: 254 LNVRNAQFKNFDTIVRMRLKSVWHKVGAKTRIHVAALTELRNLHTWLLEYDSATFASYIN 313
Query: 299 TLR 301
TL+
Sbjct: 314 TLQ 316
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 632 ESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGI 691
E D +L L+P +V+Y P+++F+R++EVYK NP + L+VY L Y +S E +F + +
Sbjct: 731 EDDDILLQELRPRFVVMYEPNLAFIRRLEVYKNSNPGLALRVYQLIYTNSFEEDRFLSTM 790
Query: 692 RRENGAFESLIRQKSFMMIPI 712
RE AF+ LI + M+IPI
Sbjct: 791 SREAEAFKKLIEDRQSMVIPI 811
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 375 EEVLEEAPKWKVLREVLEEIEE--ERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQ 432
E VLEE PKW +L VL+EIE+ R+ + + EE IVLV C + +C+Q
Sbjct: 471 EAVLEEQPKWSLLARVLKEIEDTIARIHETHA--------EEPGTDIVLVMCSSDRTCLQ 522
Query: 433 L 433
L
Sbjct: 523 L 523
>gi|443918350|gb|ELU38846.1| DNA repair protein RAD1, putative [Rhizoctonia solani AG-1 IA]
Length = 954
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 203/420 (48%), Gaps = 50/420 (11%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L + I+AE L N L+I++ GL L +L+ S+L ++ S +LL++ P+ + I
Sbjct: 10 LLPYQNTILAECLNPTNSDLIIIARGLGLRRLVCSLLRIYDNSGSLVLLINCDPDEDTAI 69
Query: 62 IHYLAPNAPLLPSEITAD--LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L P D + + R LY+ G + VT RIL+VD+L + +PT + G+
Sbjct: 70 GEQLGVMGARHPGLRIVDYEMGSKRRTELYNRGGLVCVTSRILVVDMLKKDIPTEKVTGI 129
Query: 120 IILNTH----ALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
++++ T + T + + +E +I+AFSD+P G + + IMK
Sbjct: 130 VVMHAEKYGTVYTSPANNTSLTLTTDTDLKEGFIKAFSDQPEQFTYGMSPLKTIMKE--- 186
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD 235
F V++ LER VV++ M+ M I ++++ M +D
Sbjct: 187 --------FHEEVNKSLERRRADVVEIFPSMTPAMEEIHISLVQCM-----------TLD 227
Query: 236 VEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 295
+ED+ VE+ F+ FD I+RR L P+WH + TKQLV+DL TLR LL +L+ YD V
Sbjct: 228 LEDINVESAYFRHFDAIVRRALAPVWHRVRPATKQLVNDLGTLRSLLVFLLSYDCVALHA 287
Query: 296 YLDTLRVSES------------FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
YL+T+ S S +S W++ +++ + A++R Y + E + +
Sbjct: 288 YLETIVASNSEANTGGKGQKRANQSPWLYTDAANVLLTSARRRCY---VNIAPEHQQRLR 344
Query: 344 SVTGKKRKLKKVDNNEDEDGGTSSTSTKV-------VLEEVLEEAPKWKVLREVLEEIEE 396
+ +D E G+ + +E VLEE PKWK+L +VL+EI+E
Sbjct: 345 DEAAMDEEFALLDELEGRGTGSRKKADDKRPAWLPHTMEPVLEELPKWKLLADVLKEIDE 404
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y + D +L ++P IV+ P++ F+R++EVY++ +P + ++VYF+ Y + E
Sbjct: 608 VRTYGDDGDDQLLSEIRPRYIVMMEPNLDFIRRVEVYRSASPGLAVRVYFMTYSKTVEEH 667
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPID 713
KF AG RRE AFE+LI++K M++ I+
Sbjct: 668 KFLAGQRREKDAFEALIKEKGSMVLTIE 695
>gi|403213425|emb|CCK67927.1| hypothetical protein KNAG_0A02380 [Kazachstania naganishii CBS
8797]
Length = 1087
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 164/639 (25%), Positives = 280/639 (43%), Gaps = 115/639 (17%)
Query: 94 IFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFS 153
+ VT RILIVDLL+ L + + G+++LN L + S E+FI I +S NR +I+ FS
Sbjct: 224 VLSVTSRILIVDLLSGILHPNKVTGMVVLNVETLKDFSNESFILEIYRSQNRWGFIKGFS 283
Query: 154 DKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPV--VVDVRVPMSKYMG 211
+ P + V F+ R M+ L +K+ LWPRF+V +S L V +V+V ++ M
Sbjct: 284 ESPESFVMEFSPLLRRMRDLRFQKVLLWPRFRVEISSCLNNPTTSSNVFEVKVSLTNSMS 343
Query: 212 GIQKAILEVMDACLKEM-RKTNKVDVEDLTVEN----GLFKSFDEILRRQLDPIWHILGK 266
IQ ++E + CL E+ RK ++ +E ++N L +S D ++ P WH +
Sbjct: 344 QIQFGLMECLKKCLAELNRKNPQLALEWWDIDNVLNVNLLRSIDSVML----PNWHRISY 399
Query: 267 KTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL------DTLRVSESF-RSVWIFAESSYKI 319
+KQLV D++ L+ LL +V DAV + + + + +S + S W+ AE S +
Sbjct: 400 DSKQLVKDIRFLKHLLKQIVSADAVDFYEEIQLSLEANKPSISRKYSESPWLLAEESQLV 459
Query: 320 FDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLE 379
+A+KR++ E LE
Sbjct: 460 ISHARKRIFYKD-------------------------------------------EYQLE 476
Query: 380 EAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRN 439
E PKW L ++++I E+L + + G L+AC + QL +
Sbjct: 477 EQPKWDQLLHIIDDIAHEKLGKQIT-------------GPTLIACSSTETVRQLTRVLSF 523
Query: 440 GSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSK 499
+K + + K +L K+Q K + E + + V + + +S+ SK
Sbjct: 524 AHKK---DGFRKLMLKKLQYYKDMRQEKSRTVNE-----VRKAESEVNKQELSVSSAFSK 575
Query: 500 QEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKS 559
+E + + R +G S + + R G G + G A K+ +
Sbjct: 576 EE-----VTSKRRRTRGAS--------FVAAVERLRNAGAGEDIEG-AIDSYDLGKELEL 621
Query: 560 NSKAAIEDK-----PEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDT 614
+ A ED+ P S P +++ S +L V ++ Q K L ++
Sbjct: 622 TEQGAEEDEFDELIPYSPESFVVKPENDLESD------QLLPYEEVFQDAQ-KSGLTSEL 674
Query: 615 AESKDS--KPVPP-----VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENP 667
E + S +P V ++ +D+ L P I+++ PD+SF+R++E+Y+A
Sbjct: 675 WEERKSCFSYIPRGDQIIVEKFSNLNDELSLQEQMPSYIIIFEPDLSFIRRVELYRASCS 734
Query: 668 SIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
KVYF++Y +S E Q I+RE AF LIR+ +
Sbjct: 735 DNPCKVYFMYYGESVEEQNHLTAIKREKDAFSKLIRENA 773
>gi|146419736|ref|XP_001485828.1| hypothetical protein PGUG_01499 [Meyerozyma guilliermondii ATCC
6260]
Length = 1020
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 168/663 (25%), Positives = 285/663 (42%), Gaps = 116/663 (17%)
Query: 82 ANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIK 141
A+ R LY G + VT R+L VD+L+ + + + GL+I++ + E S E+FI + +
Sbjct: 159 ADKRRRLYDKGGVVSVTSRVLAVDMLSGVIKCNEITGLLIVHAETMKEASNESFIVNLYR 218
Query: 142 SLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER------- 194
N +++A SD+P + +GF +K L + + LWPRF V VS L+
Sbjct: 219 DENDWGFVKAISDEPESF-TGFTPLATSLKVLRLTNVFLWPRFHVEVSSSLQARKKGSKD 277
Query: 195 EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEIL 253
+ V+++ MS M IQ AIL ++ACL E+++ N + E +EN + F +
Sbjct: 278 DRRSVIEINTKMSYKMKKIQAAILACIEACLNELKRHNGLLATEYWDMENVHDRDFVPRI 337
Query: 254 RRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL------------R 301
R LD WH + +KQL+ DL TL+ L +L+ D++ + + + +
Sbjct: 338 RMALDSQWHRITYTSKQLIYDLGTLKDFLKHLLSSDSLKFYQTVQNIIDLNVKSKTGTGA 397
Query: 302 VSESFRSVWIFAESSYKIFDYAKKRV---YRFTRSDGVELNGQSKSVTGKKRKLKKVDNN 358
+S + S W+ E + I +AK+R R RS L Q +S+
Sbjct: 398 LSTTTISPWLNLEEATTIISFAKERALGKLRIERSKTT-LEEQDESL------------- 443
Query: 359 EDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHG 418
E+ G ST E LE PKW L +L++I E+ + ++
Sbjct: 444 EELTPGHISTHE----EYNLELQPKWGQLGLLLDDIMHEKAILGNVQQP----------- 488
Query: 419 IVLVACKDECSCMQLEDCI------RNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
+L+ C D + QL + NG K+ KY++ ++
Sbjct: 489 -ILIMCSDLSTTRQLAQLLPILELKDNGGRKIFSA--RKYMIRRLN-------------- 531
Query: 473 EPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPE--TYYGS 530
D +A E S ++KQ + L + K +D D+ E Y S
Sbjct: 532 --------DYLAW------KELSRLTKQINTEL---------EVKEEDTDSKEDDDIYTS 568
Query: 531 KGPGRGRGK---GRNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGV 587
K RGRG+ R R A + S I + P++ + E+
Sbjct: 569 KTFSRGRGEPISKRRRTRGASTVALVTRLHSSAGLNQISEAPDLDPVIVDNLKREVSDED 628
Query: 588 VGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALE----SDQPILDILKP 643
V SGG EV + + ++ + ++ + + + +E ++ + L P
Sbjct: 629 VLESGGF--------EVNDEIYVDENSTQRQEIEHISQMDQIVIENYHGNNNDFIQELSP 680
Query: 644 FVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIR 703
I++Y P++ F+R +E+Y+A N K YF++Y S E QK I++E AF LIR
Sbjct: 681 SHIIMYEPNLPFIRAVEIYQAINKDTPAKTYFMYYGTSVEEQKHLMQIKKEKDAFTRLIR 740
Query: 704 QKS 706
+K+
Sbjct: 741 EKA 743
>gi|405124195|gb|AFR98957.1| hypothetical protein CNAG_05531 [Cryptococcus neoformans var.
grubii H99]
Length = 1105
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 179/342 (52%), Gaps = 24/342 (7%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L FH+++I L + L++++ GL L +++ ++L + + +LL+ ++P ++ I
Sbjct: 12 LPFHKNLIRTLCRPQQDDLLLIAKGLGLRRIVCALLKTYDRKEDLVLLVGATPADEAGIG 71
Query: 63 HYLAPNAPLLPS--EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P + ++ R +Y G +F VT +IL+ DLL +P + GL+
Sbjct: 72 DELGIMGVRDPGFRVVGYEMSVKEREEMYRHGGLFSVTSKILVNDLLKGTVPVKLITGLV 131
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
IL+ ++ S E F + +AFSD+P G + ++ +L + + +
Sbjct: 132 ILHAERISHGSQEEFAS---------GFCKAFSDEPEVFAHGMSPLRDMLINLNMTNVLI 182
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN--KVDVED 238
WPRF V +L VV++ VPM+ M Q AI E M+A L E+++ + +D+ED
Sbjct: 183 WPRFNEVVKVDLSSRRADVVEMYVPMTDLMRQCQDAITECMEAMLVELKRDHSLNLDLED 242
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ V N FK+FD I+R +L P+WH +G KTK V+ L LR L +L+ YD+ T+ Y++
Sbjct: 243 INVRNAQFKNFDTIVRMKLKPVWHKVGAKTKIHVAALTELRNLHTWLLEYDSATFASYIN 302
Query: 299 TLR---------VSESFRSV--WIFAESSYKIFDYAKKRVYR 329
TL+ + + R + W A+++ ++ + ++ RV R
Sbjct: 303 TLQRQHFQAERLTTGAGRHIHDWFNAKAASQLVEASQARVSR 344
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y E D +L L+P +V+Y P+++F+R++EVY+ NP + L+VY + Y +S E +F
Sbjct: 750 YGGEDDDILLQELRPRFVVMYEPNLAFIRRLEVYRNCNPGLSLRVYQMIYTNSFEEDRFL 809
Query: 689 AGIRRENGAFESLIRQKSFMMIPI 712
+ I+RE AF+ LI + M+IPI
Sbjct: 810 STIQREAEAFKKLIDDRQSMVIPI 833
>gi|444319284|ref|XP_004180299.1| hypothetical protein TBLA_0D02790 [Tetrapisispora blattae CBS 6284]
gi|387513341|emb|CCH60780.1| hypothetical protein TBLA_0D02790 [Tetrapisispora blattae CBS 6284]
Length = 1060
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 236/502 (47%), Gaps = 113/502 (22%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPS-------QGTLLLLSSS 54
L+F Q I+ +L N L+I+ GL + ++A++L +L +P+ + +L+L++S
Sbjct: 104 LDFQQKIVENVLISDNP-LLIIGKGLGINAIVANLLHVLSTPTVINKQRKRSLVLVLNAS 162
Query: 55 PN----LKSQI--IHYLAPN-----------APLLPSE-----ITAD-LPANHRHTLYSS 91
+ + Q+ +++LA + A ++ +E +TAD L R LY S
Sbjct: 163 IDDNRIISEQLQELNWLAESNYESTNKLSNLAEIIDNERPFNVVTADSLSVEKRRQLYLS 222
Query: 92 GQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRA 151
G + VT RILIVDLL+ + N+ G+I+LN+ L E S E+FI I +S N+ +I+A
Sbjct: 223 GGVVSVTSRILIVDLLSGIVHPDNITGMIVLNSETLKEYSNESFILEIYRSKNKWGFIKA 282
Query: 152 FSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL----EREPPVVVDVRVPMS 207
FS+ A F+ + MK L ++ + LWPRF+V +S L E+E V++VR+ +
Sbjct: 283 FSESAEAFTMEFSPLMKKMKDLRLKNVLLWPRFRVEISSALNIVKEKEISKVIEVRISPT 342
Query: 208 KYMGGIQKAILEVMDACLKEMRKTNKVDVEDL-----TVENGLFKSFDEILRRQLDPIWH 262
M IQ ++E + C+ E+ + N D +EN KS D ++ P WH
Sbjct: 343 NSMNQIQFGLVECLKKCIAELNRKNPELARDWWTPEHMLENSFLKSIDSVMM----PNWH 398
Query: 263 ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK----YLDTLRVSESFR---SVWIFAES 315
+ ++KQL+ D++ L L L+ DAV + + LD + S S + S W+ A+
Sbjct: 399 RISYESKQLIKDIRFLINLTKALLTTDAVDFYEEIQLSLDANKPSVSRKYTESPWLMADE 458
Query: 316 SYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLE 375
S + YAKKR+ F +S E
Sbjct: 459 SQLVISYAKKRI--FNKS-----------------------------------------E 475
Query: 376 EVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLED 435
+LEE PKW+ L+++LE+IE +L + N G L+ C + QL
Sbjct: 476 YLLEELPKWEQLKDILEDIEYNKLHR-------------NIQGPTLIMCSNNYISSQLSR 522
Query: 436 CI-----RNGSEKVMREEWEKY 452
+ +NG K+M + + Y
Sbjct: 523 LLSYSHKKNGIRKMMMRKLQVY 544
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
+A +D L + P I++Y PD++F+R+ E+YK N ++YF++Y DS E Q +
Sbjct: 681 FANINDVSFLQEIMPSFIIMYEPDLTFIRKAELYKKINQHNSPQIYFMYYGDSIEEQNYL 740
Query: 689 AGIRRENGAFESLIRQKSFM 708
I+RE AF LIR+ + +
Sbjct: 741 TSIKREKDAFSKLIRENAML 760
>gi|312066114|ref|XP_003136116.1| ERCC4 domain-containing protein [Loa loa]
gi|307768728|gb|EFO27962.1| ERCC4 domain-containing protein [Loa loa]
Length = 844
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 213/443 (48%), Gaps = 69/443 (15%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPN-APLLPSEITAD 79
L +L+ GL L +L+ L L+ Q + +++++P + + L + A P ITAD
Sbjct: 47 LFVLAGGLGLERLVFHHLHLYCDPQLLVFVINTTPQDDAYFLSRLRDSKAKCPPKIITAD 106
Query: 80 LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRI 139
R +LY G ++F+T RIL+VD L +R+P N+AG+I+ H L E+FI R+
Sbjct: 107 CSIKDRESLYMEGGVYFITSRILMVDFLQERIPVKNVAGIIVHRAHQLLNGFQESFILRL 166
Query: 140 IKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVV 199
+ +++AFSD P A+ SG +R++ L+IR++ L PRF V+V L+ P +
Sbjct: 167 YREKKTGGFVKAFSDNPGAL-SGMGVLQRLLNRLYIRRVRLLPRFDVDVKGSLDPCSPHM 225
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEMRKT-----NKVDVEDLTVENGLFKSFDEILR 254
+++ + + M +Q +++++ C++E+R+ + + E + GL S EI
Sbjct: 226 IEISLDLPHAMRRVQSLLVDIIRTCVRELRQASLPTDDTPEEESIQPAAGLLPSSLEI-- 283
Query: 255 RQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF---RSVWI 311
QL + +K ++L++DLK LR LL D +T LD +R +++ S W+
Sbjct: 284 -QLKGRQFSITEKQQRLLADLKQLRNLLYKAEELDPITLYCCLDEVRNNKNLITTNSGWL 342
Query: 312 FAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTK 371
F ++S K+F + KL ++ +N T
Sbjct: 343 FTQTSSKLF--------------------------AEVDKLCRIKSN---------TKQS 367
Query: 372 VVLEEVLEEAPKWKVLREVLEEIE-EERLKQASSREE--VLLDGEENDHGIVLVACKDEC 428
V+ E PKWK L +VLEEI+ +L + +S E VLL G N+
Sbjct: 368 VL------EPPKWKALLKVLEEIKINYKLDKMNSEREPTVLLIGAGNE------------ 409
Query: 429 SCMQLEDCIRNGSEKVMREEWEK 451
C QL D I G K + + EK
Sbjct: 410 VCRQLRDIISWGVTKFLWIQNEK 432
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKP----VPPVHFYALESDQPILDILKPFVIVVYHPD 652
T+ +VQ R ++ ES+D P VP Y L L+ +P ++++YH D
Sbjct: 530 TSLNVDDVQSGRPNDSEGVESQDQDPLLVIVPSGERYNLIRQ---LETFEPRIVILYHSD 586
Query: 653 MSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMM 709
M +R +E+Y+A + +L +Y + Y +S E +++ +R+E AFE ++R++ +M
Sbjct: 587 MISLRLLEMYRACHSDKQLTIYVIMYANSNEEERYLCSLRKEQVAFEEMVREQGTLM 643
>gi|198436717|ref|XP_002125462.1| PREDICTED: similar to DNA repair endonuclease XPF (DNA excision
repair protein ERCC-4) (DNA-repair protein complementing
XP-F cells) (Xeroderma pigmentosum group F-complementing
protein) [Ciona intestinalis]
Length = 810
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 149/264 (56%), Gaps = 18/264 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ I ++ QE L+++ GL L ++ + L L+S + + +L++ +
Sbjct: 50 MLEYENQIFLDMYQE--NALLVMCEGLGLDRIFLNFLRLYSDLKELVFVLNTDQLQQEYY 107
Query: 62 IHYL-APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
I L + LP +T++ A R +Y+ G IFF + RIL++DLL R+P ++G++
Sbjct: 108 IEKLRSLGVNQLPCIMTSEYGAQERKRMYARGGIFFASSRILVMDLLVDRIPVHLVSGML 167
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H + + E FI R+ + N+E +I+ F+D P A+V G+++ E++MK++F+ K+ L
Sbjct: 168 VTKAHKMADACQEPFILRLFRQKNKEGFIKGFTDNPVALVGGYSRMEKVMKNMFVGKVFL 227
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLT 240
WPRF +N+ E +++ P V+++ V ++ M IQ ++LE++ ACLKE++ N
Sbjct: 228 WPRFHLNIIECMDKRKPEVIEIGVELTNSMKIIQTSLLEIVSACLKELKSNNP------- 280
Query: 241 VENGLFKSFDEILRRQLDPIWHIL 264
GL KS + P W IL
Sbjct: 281 ---GLHKS-----QIAFGPKWEIL 296
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 624 PPVHFYALESD------QPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLF 677
P H +AL + L+ ++P +++Y + FVRQ+EVYKA P I L+VYFL
Sbjct: 421 PETHLHALHGNPDPYILSRALEEIQPRYVILYDSSIHFVRQLEVYKACRPGIPLRVYFLT 480
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
++ S E Q + +RRE AF SLI++K+ M+IP
Sbjct: 481 FQSSAEEQVYLTSLRREKEAFHSLIQEKATMVIP 514
>gi|170592186|ref|XP_001900850.1| ERCC4 domain containing protein [Brugia malayi]
gi|158591717|gb|EDP30321.1| ERCC4 domain containing protein [Brugia malayi]
Length = 923
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 210/437 (48%), Gaps = 69/437 (15%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI-TAD 79
L + +SGL + + I L L+ Q + +++++P + + L + P +I TAD
Sbjct: 47 LFVFASGLGMERFILHHLHLYCDPQLLVFIINTTPQDDTYFLSRLRDSKVKCPPKIITAD 106
Query: 80 LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRI 139
R +LY G I F+T RIL+VDLL +R+P N+AG+I+ H L E+FI R+
Sbjct: 107 CSIKDRESLYMEGGIQFITSRILMVDLLQERVPVKNVAGIIVHRAHQLLSGFQESFILRL 166
Query: 140 IKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVV 199
+ +++AFSD P A+ SG +R++ L+IR++ L PRF V+V L+ P +
Sbjct: 167 YRERKAGGFVKAFSDNPGAL-SGMGVLQRLLNRLYIRRVRLLPRFDVDVKSSLDPCSPHM 225
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEMRKT-----NKVDVEDLTVENGLFKSFDEILR 254
+++ + M IQ +++++ C++E+++ N D E + +GL S EI
Sbjct: 226 IEITPDLPHAMRKIQSLLVDIIRTCVRELKQASLSADNIPDEESMQPASGLLPSSLEI-- 283
Query: 255 RQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF---RSVWI 311
QL + +K ++L++DLK LR LL D +T LD +R ++ S W+
Sbjct: 284 -QLKGRHFSITEKQQRLLADLKQLRNLLYKAEELDPITLYCSLDEVRNNKDLITTNSGWL 342
Query: 312 FAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTK 371
F +++ K+F A +L K+ S T
Sbjct: 343 FTQTASKLFAEAD--------------------------RLCKI---------KSDTKQS 367
Query: 372 VVLEEVLEEAPKWKVLREVLEEIE-EERLKQASSREE--VLLDGEENDHGIVLVACKDEC 428
V+ E PKWK L ++LEEI+ ++++ +S +E VLL G EN+
Sbjct: 368 VL------EPPKWKALLKILEEIKINYKMERMNSEKEPTVLLIGAENE------------ 409
Query: 429 SCMQLEDCIRNGSEKVM 445
C QL D + G K +
Sbjct: 410 VCRQLRDIVSWGVAKFL 426
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 47/72 (65%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L+ +P ++++YH DM +R +E+YKA + I L +Y + Y +S E +++ +R+E A
Sbjct: 572 LETFEPQIVILYHSDMVSLRLLEMYKACHSHIPLIIYIVMYGNSNEEERYLCSLRKEQIA 631
Query: 698 FESLIRQKSFMM 709
FE ++R++ +M
Sbjct: 632 FEEMVREQGTLM 643
>gi|402592823|gb|EJW86750.1| ERCC4 domain-containing protein [Wuchereria bancrofti]
Length = 923
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 208/443 (46%), Gaps = 72/443 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI-TAD 79
L + +SGL + + I L L+ Q + ++++ P + + L + P +I TAD
Sbjct: 47 LFVFASGLGMERFILHHLHLYCDPQLLVFIINTIPQDDAYFLSRLRDSKVKCPPKIITAD 106
Query: 80 LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRI 139
R +LY G I F+T RIL+VDLL R+P N+AG+I+ H L E+FI R+
Sbjct: 107 CSIKDRESLYMEGGIQFITSRILMVDLLQGRVPVKNVAGIIVHRAHQLLSGFQESFILRL 166
Query: 140 IKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVV 199
+ +++AFSD P A+ SG +R++ L+IR++ L PRF V+V L+ P +
Sbjct: 167 YRERKAGGFVKAFSDNPGAL-SGMGVLQRLLNRLYIRRVRLLPRFDVDVKSSLDPCSPHM 225
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEMRKT-----NKVDVEDLTVENGLFKSFDEILR 254
+++ + M IQ +++++ C++E+R+ N D E + GL S EI
Sbjct: 226 IEITPDLPHAMRKIQSLLVDIIRTCVRELRQASLSADNIPDEESIQPAAGLLPSSLEI-- 283
Query: 255 RQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF---RSVWI 311
QL + +K ++L++DLK LR LL D +T LD +R ++ S W+
Sbjct: 284 -QLKGRQFSITEKQQRLLADLKQLRNLLYKAEELDPITLYCSLDEVRNNKDLITTNSGWL 342
Query: 312 FAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTK 371
F +++ K+F A +L K+ S T
Sbjct: 343 FTQTASKLFAEAD--------------------------RLCKI---------KSDTKQS 367
Query: 372 VVLEEVLEEAPKWKVLREVLEEIE-EERLKQASSREE--VLLDGEENDHGIVLVACKDEC 428
V+ E PKWK L +VLEEI+ ++++ +S +E VLL G N+
Sbjct: 368 VL------EPPKWKALLKVLEEIKINYKMERMNSEKEPTVLLIGAGNE------------ 409
Query: 429 SCMQLEDCIRNGSEKVMREEWEK 451
C QL D I G K + W K
Sbjct: 410 VCRQLRDIISWGVAKFL---WVK 429
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
L+ +P V+++YH DM +R +E+YKA + I L +Y + Y +S E +++ +R+E A
Sbjct: 572 LEAFEPQVVILYHSDMVSLRLLEMYKACHSDIPLTIYIVMYANSNEEERYLCSLRKEQIA 631
Query: 698 FESLIRQKSFMM 709
FE ++R++ +M
Sbjct: 632 FEEMVREQGTLM 643
>gi|406607589|emb|CCH41060.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 994
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 199/417 (47%), Gaps = 85/417 (20%)
Query: 82 ANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIK 141
A+ R LY SG I VT RI IVD+L+ + S + G+++++ + + S E+FI + +
Sbjct: 169 ADKRQKLYQSGGIMSVTSRIFIVDMLSGIVNPSKITGIVVMHAERVNDLSNESFIVHMYR 228
Query: 142 SLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL-EREPPVVV 200
N+ +I+A +D +GF+ R +K L ++K+ LWPRF + VS L ++ V
Sbjct: 229 QQNKWGFIKALTDSAEDFSTGFSPLHRKLKDLRLKKILLWPRFHIEVSSSLMNKDTKSVT 288
Query: 201 DVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDP 259
++ V M++ M IQ +L + C++E+++ N + ++ +EN L +F ++ LDP
Sbjct: 289 EINVMMTESMKHIQTGLLGCLKKCIEELKRKNPTLAIDYWNIENALDPNFLGVIHMILDP 348
Query: 260 IWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL----------RVSESFRSV 309
WH + +KQLV D+K L+ LL L+ YDAV + + + + R SE S
Sbjct: 349 NWHRISFDSKQLVKDIKLLKHLLKCLISYDAVDFYEVIQLVLEANKPSVDKRNSE---SP 405
Query: 310 WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTS 369
W+ A+ S + YAKKRVY +N+
Sbjct: 406 WLMADESQAVISYAKKRVY---------------------------END----------- 427
Query: 370 TKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH--GIVLVACKDE 427
E VLEE PKW+ L +L++I ER N H G VL+ C D
Sbjct: 428 -----EYVLEENPKWEQLAILLDDIVIER--------------AHNPHKDGPVLIMCSDS 468
Query: 428 CSCMQLEDCI------RNGS-----EKVMREEWEKYLLSKVQLRSVQTSSKKKKSKE 473
C QL+ + + GS KVM ++ + YL +K + +V + ++ ++E
Sbjct: 469 KVCFQLKRFLSTMKESKTGSRSYSGRKVMVDKLQAYLDAKEEKTNVTSKIQEAAAQE 525
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFK 688
Y ++D IL L P I++Y PD+SF+R++EV++A + YF++Y DS E Q+
Sbjct: 640 YQSKTDDLILQELMPSFIIMYEPDLSFIRRVEVHQANFKDDPARTYFMYYNDSVEEQRHL 699
Query: 689 AGIRRENGAFESLIRQKS 706
I++E AF LIR+KS
Sbjct: 700 TAIKKEKEAFTKLIREKS 717
>gi|255725584|ref|XP_002547721.1| hypothetical protein CTRG_02028 [Candida tropicalis MYA-3404]
gi|240135612|gb|EER35166.1| hypothetical protein CTRG_02028 [Candida tropicalis MYA-3404]
Length = 976
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 151/650 (23%), Positives = 274/650 (42%), Gaps = 101/650 (15%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I + ++ R +Y G I ++P +LI D+L+ + +++ GLII + + E + F
Sbjct: 127 IGGETQSHKRSKIYKEGGIISISPMLLINDILSFMISPNDITGLIIFHAERIKEFGNDAF 186
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL--- 192
+ R+ + N +I+AFSDKP + V GF +K L + + LWPRF + +SE
Sbjct: 187 LIRLYRDRNNWGFIKAFSDKPESFV-GFTPLATKLKILNLSHVFLWPRFHMTISESFNIR 245
Query: 193 ---EREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKS 248
+ +V +V+V ++ M +Q I V++ C++E+++ N +D+E V+N
Sbjct: 246 NKKDTVGKLVTEVKVGLTPNMKKLQSLITSVIEGCVRELKRHNSDLDLEYCHVDNIYDDG 305
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD--------TL 300
F + ++ L WH L +K L+ + L LL L+ D++ + L+
Sbjct: 306 FADNIKASLQSNWHRLTPISKNLIFSIGFLSDLLGALLITDSIGFYHILNERIEADLILQ 365
Query: 301 RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNED 360
R + W+ ++ + I A RV+ G +R
Sbjct: 366 RTQNRSKEPWLMSDEAGAIKSIAAARVF------------------GTER---------- 397
Query: 361 EDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIV 420
GT + LEE PKW L +++ +I E+ K +E + G +
Sbjct: 398 ---GTYA----------LEELPKWNELGKLVHDISIEKEK-----------AQEKNCGPI 433
Query: 421 LVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGIL 480
L+ CK++ ++ + E+ + + + K + ++T + + + P
Sbjct: 434 LIVCKNKIVASEIVSVLNTMQERKVADR-HGFSCRKYMIEKLRTYCEWQNNISP------ 486
Query: 481 DGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKG 540
+I Q +E A K + G D G + + G R + +
Sbjct: 487 ------RIKQISE-------------ELAGKQSDTG-GDVGSSVSPTFSRNGEPRSK-RR 525
Query: 541 RNRNG---PACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPAD-EIHSGVVGYSGGMLE 596
R R G A V QS + K ++K I+ E+ ++ A+ IH+
Sbjct: 526 RTRGGSATAAAVVQSHQQQIKDSTKVDIQVVDELEAEYDQEVAETSIHNDDGDDDDDDEI 585
Query: 597 TAFVEKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFV 656
F E + D A K V F + I + L P I++Y D++F+
Sbjct: 586 LEFTEIDDDSGIQNGFDFAHIKKEDQVIVEVFDEFWNTATIQE-LHPSHIIMYEHDLTFL 644
Query: 657 RQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
R++E+Y+A N +VY ++Y DS E QK I++E AF LI++K+
Sbjct: 645 RRVEMYQAINREHPAEVYLMYYRDSVEEQKHLLRIKKEKDAFSKLIKEKA 694
>gi|260941884|ref|XP_002615108.1| hypothetical protein CLUG_05123 [Clavispora lusitaniae ATCC 42720]
gi|238851531|gb|EEQ40995.1| hypothetical protein CLUG_05123 [Clavispora lusitaniae ATCC 42720]
Length = 1112
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 185/394 (46%), Gaps = 36/394 (9%)
Query: 77 TADL--PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T D+ PA R +Y+SG + V R L VDLL + + + GL+IL+ + E S E
Sbjct: 255 TGDMTTPAKRRR-MYASGGLLAVPARTLSVDLLAGVVSPAAITGLVILHAERVKETSAEA 313
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
+ + + N +++A SD P A +GF +K L + + LWPRF V V+ L++
Sbjct: 314 LVVSLYRDGNAWGFVKAISDSPEAF-TGFTPLASRLKVLRLSNVFLWPRFHVAVTSSLQK 372
Query: 195 -------EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLF 246
+ V ++ V +++ M IQ A+L ++ACL E+R+ N +D E V+N
Sbjct: 373 HKGQKKSQTLHVTEINVRLTRRMAQIQGAVLACIEACLGELRRHNPSLDTEYWNVDNVHD 432
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF 306
+ F + +RR L+P WH L +KQLV D+ TL LL L+ D+V + + + +L S
Sbjct: 433 EGFSQRVRRSLEPHWHRLSWTSKQLVHDVATLADLLAALLVDDSVAFYQRVQSLVEGASG 492
Query: 307 RSV--WIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGG 364
+S W+ + + I YA++R + L+G ++ T N DE
Sbjct: 493 KSASPWLMMDEAPAIVTYARERALGDSEVRRRNLHGNERNQT--------TGVNADESPA 544
Query: 365 TSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVAC 424
+ S +LEE PKW L V+E+I ER + G +LV C
Sbjct: 545 ATEFSPPRS-SPMLEELPKWAQLSAVIEDIAHER-------------SLSHTEGAILVMC 590
Query: 425 KDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQ 458
+ QL + + + + Y+ S+++
Sbjct: 591 ASGRTAQQLSHLLSSAKRGNGQYSFRPYMASRLR 624
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L + P I++Y PD+SF+R++E+++A S KV+F++Y S E Q+ IR+E
Sbjct: 769 LLQEISPAYIIMYEPDLSFIRRVEIFQAL--SRPAKVFFMYYGTSVEEQRHLVRIRKEKQ 826
Query: 697 AFESLIRQKSFM 708
AF LI++K+ +
Sbjct: 827 AFTKLIKEKATL 838
>gi|385301512|gb|EIF45699.1| rad1p [Dekkera bruxellensis AWRI1499]
Length = 608
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 214/466 (45%), Gaps = 83/466 (17%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL-LLHSPSQGT-------LLLLSSS 54
L + Q I+ +L+ + LVIL GL + K++A++L +L + GT + L+++S
Sbjct: 69 LXYQQEIVRQLISQD--ALVILGRGLGIEKIVANLLQILGISTSGTKKXKKSLIFLINAS 126
Query: 55 PNLKSQIIHYLAPNAPLLPSEITADLPAN---------------HRHTLYSSGQIFFVTP 99
+I L + + +E + D N R Y G I ++
Sbjct: 127 EYENFRIGEDLMELSWM--NEDSXDXNENVQFTVIGAGEGTTVDKRRAXYERGGIISLSN 184
Query: 100 RILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAM 159
R+L+ DLL + + ++ G+++L+ + E S + F+ + + N+ +++AFS+ P +
Sbjct: 185 RVLVTDLLAEVVDPGSVTGIVLLHAENIREYSNDRFVVNLYRRKNKWGFVKAFSEDPERL 244
Query: 160 VSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL---EREPPVVVDVRVPMSKYMGGIQKA 216
GF +K L ++K LWPRF ++V+ L +R V +VRV ++ Y IQ A
Sbjct: 245 SIGFQPLYTELKFLKLQKALLWPRFHIDVTRSLRSRKRSDNTVTEVRVKLTSYTEKIQNA 304
Query: 217 ILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
++ ++A + E+R+ N V + T++N L +F + + L+P+ H + T+Q+V DL
Sbjct: 305 LMSCIEALIGELRRNNPDVASDYWTIDNALDNNFVQRIHMGLEPVXHRISLTTRQIVFDL 364
Query: 276 KTLRKLLDYLVRYDAVTYLKYLD--------TLRVSESFRSVWIFAESSYKIFDYAKKRV 327
+TL+ LL +L+ D V + L+ T+ + + W+ + S + AK R+
Sbjct: 365 ETLKMLLKHLLERDCVEFYGELNGIVEANKPTITRNNKAMATWLMLDESMAMIACAKARI 424
Query: 328 YRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVL 387
+ K+K D +E ST +LEE PKW
Sbjct: 425 F---------------------DKIKDSDKXNEE-----STY-------LLEEQPKWDQX 451
Query: 388 REVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQL 433
+LE+I E++ S ND G L+ C +C QL
Sbjct: 452 SIILEDINREKMVHDXS----------ND-GPTLIMCYSYHTCRQL 486
>gi|403332158|gb|EJY65073.1| DNA repair endonuclease XPF, putative [Oxytricha trifallax]
Length = 1073
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 184/342 (53%), Gaps = 30/342 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-----------LHSPSQGTLLL 50
+LE+ +HI+ +L Q N L++L+ G S+ K +A+ L+ +HS S + L
Sbjct: 35 LLEYERHILQDLNQNKNS-LLVLARGFSVAKQVANFLMQYRKTFDCGNNVHS-SPFLIFL 92
Query: 51 LSSSPNLKSQIIHYLAP-----NAPLLPSEIT-ADLPANHRHTLYSSGQIFFVTPRILIV 104
++ S + I +YL PL+ + I +D N R +Y G +F V+ + +++
Sbjct: 93 INFSDSDYQAIEYYLQQCTYDGTNPLMMTRIAPSDSLTNKRIDMYLKGGVFSVSYKAIVL 152
Query: 105 DLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNRE-AYIRAFSDKPTAMV--S 161
DLLT+RL S ++G II N H + ENS E+F+C+I++ N + A+I+ SD P+ +
Sbjct: 153 DLLTKRLSPSIISGFIINNAHKVQENSQESFLCKILRKDNPDNAFIKCISDNPSLIARGG 212
Query: 162 GFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPV-VVDVRVPMSKYMGGIQKAILEV 220
G E +MK L + L+++ R + ++ + ++ + V++ + +K M + ++E+
Sbjct: 213 GIFGIENLMKILQVNNLYIYQRIKKSIKDSIDNVKQIKVIENGLKFTKRMDEMHTILIEL 272
Query: 221 MDACLKEMR-KTNKVDV------EDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVS 273
+ ACL+E++ + K D E L + L KSF+ + R + + LG+K QL+
Sbjct: 273 LAACLEELKGQIKKFDNLSGEPDEVLDPQKALLKSFEGLFRGMMGKNYVYLGQKANQLIQ 332
Query: 274 DLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAES 315
+++ ++KL+ L+ D V + L+ LR +E+ + IF S
Sbjct: 333 NIRDIKKLMWLLLNQDCVNFYYNLNDLRTNENANNFSIFKYS 374
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSI--------KLKVYFLFYEDSTEVQKFKAGIR 692
L P ++V+Y P + F+R IE+Y AE +++V F+ +E+S E ++ +
Sbjct: 700 LDPKIVVLYEPQLEFMRAIEIYNAERVKFHEDPDSLDQIEVNFMIFEESAEYYQYMNNVE 759
Query: 693 RENGAFESLIRQKSFMMIPI 712
E F+ L+ K + I +
Sbjct: 760 VEKKGFQKLMDIKPKLYIEL 779
>gi|344230428|gb|EGV62313.1| hypothetical protein CANTEDRAFT_131677 [Candida tenuis ATCC 10573]
Length = 965
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 229/519 (44%), Gaps = 87/519 (16%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L++ + I+++LL + L+IL GL ++A++L + + S L + N KS +I
Sbjct: 56 LKYQREIVSDLLAK--DALLILGKGLGWEIIVANILYILNLSNLKDKLPNPPANRKSLLI 113
Query: 63 ---------HYLAPNAPLLPSEITA----DLPANHRHTLYSSGQIFFVTPRILIVDLLTQ 109
H +A + L + +T + R +Y G + +T RIL+VDLL++
Sbjct: 114 LLNANEVENHKIAADLLELQASMTVVGGESTVVDKRRQIYQKGGVVSITSRILVVDLLSE 173
Query: 110 RLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERI 169
L + GL +L+ + E S E+FI + + N +I+AFSD P + +GF
Sbjct: 174 VLKPEEINGLFVLHAERIKETSNESFIVNLYRDQNEWGFIKAFSDDPESF-TGFTPLASR 232
Query: 170 MKSLFIRKLHLWPRFQVNVSEEL-------EREPPVVVDVRVPMSKYMGGIQKAILEVMD 222
++ L + LWPRF V+V E L R+ V ++ + +S M IQ A+L ++
Sbjct: 233 LRHLKLSNTLLWPRFHVDVIESLSFRHKKFHRDLKTVNEINIKLSYKMTRIQSALLTCIE 292
Query: 223 ACLKEM-RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKL 281
CLKE+ R + + +EN F +R L+ WH L + K LV DL L+ L
Sbjct: 293 QCLKELIRHCQSLSTDYWDIENLYDPDFVHRIRNSLESHWHRLTQTPKSLVYDLGFLKGL 352
Query: 282 LDYLVRYDAVTYLKYLDTLRVSESFRSV-------------WIFAESSYKIFDYAKKR-- 326
L L+ D++T+ + + + RSV W+ ++ + I YAK+R
Sbjct: 353 LSSLLTRDSLTFYQIVQSAVDGNLRRSVNTSGTMNLTSMSPWLNSDVAPTITSYAKERAL 412
Query: 327 -VYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWK 385
+ ++ SDGVE +E LE PKW
Sbjct: 413 GMSKYVGSDGVE-----------------------------------SVEYNLEPLPKWI 437
Query: 386 VLREVLEEI--EEERLKQASSR----------EEVLLDGEENDHGIVLVACKDECSCMQL 433
L ++L+EI L AS R ++ ++ GE N ++ + +L
Sbjct: 438 ELNKLLKEIGPNSRILVMASDRMVVEELQCLIQKFIMTGEINSRSYMVSKLRGYLMWKEL 497
Query: 434 EDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSK 472
R S V +E + ++SK RS + +S +++++
Sbjct: 498 SKLRRQLSNDVNDDEQDDIVVSKTFKRSRENASIRRRTR 536
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V + ++D +L+ KP I+ Y P++SF+R++E Y+ + + KVY +FY S E Q
Sbjct: 613 VQSFNSKTDDTLLNEFKPTHIIFYEPNLSFIRRVENYQGVHFNEPAKVYMMFYGTSAEEQ 672
Query: 686 KFKAGIRRENGAFESLIRQKS 706
+++E AF LIR+K+
Sbjct: 673 SSLVQMKKEKEAFTRLIREKA 693
>gi|221482332|gb|EEE20687.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Toxoplasma
gondii GT1]
Length = 1218
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R LY+ G F V+ R+++ DLL+ +LP + +I+++ + E FI R+ +
Sbjct: 359 QRQKLYAKGGCFCVSSRVMVGDLLSGKLPPEVIDCIIVMHAETVCRGFNEAFIVRLYRQR 418
Query: 144 NREAYIRAFSDKPTAM----------VSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
NR ++A D P+A VS F ER MK L+I+K+HL+PR V LE
Sbjct: 419 NRLGGLKAICDNPSAFFSSFLSRRQNVSIFGLLERTMKQLWIQKVHLFPRDASAVQRSLE 478
Query: 194 REP-PVVVDVRVPMSKYMGGIQKAILEVMDACL---KEMRKTNKVDVED---LTVENGLF 246
P ++V + S IQ+AI ++ + L K +R N +V+D L + G F
Sbjct: 479 AAAEPESLEVILRPSASTLEIQRAITLLLQSGLDFLKRVRLLNLENVQDANALILGGGGF 538
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF 306
++F ++ + +WH L KT+Q V+DL LR LL L R DAV + +D L+ S+
Sbjct: 539 ETFAASVKESAEAVWHRLDAKTRQFVADLGVLRNLLWRLYRLDAVAFFSLVDALKSSKVL 598
Query: 307 RSVWIFAESSYKIFDYAKKRVYRFTR 332
W+ + + A+ RV+ R
Sbjct: 599 DPGWMHTTEMHILLHRAQSRVFSLQR 624
>gi|339256812|ref|XP_003370282.1| putative ERCC4 domain protein [Trichinella spiralis]
gi|316965578|gb|EFV50271.1| putative ERCC4 domain protein [Trichinella spiralis]
Length = 789
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 151/310 (48%), Gaps = 5/310 (1%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITADL 80
L+I + GL + +L + L+S +++L + + L P+ +T++
Sbjct: 49 LLIAAKGLCVERLFVRYIELYSDPSVLVIVLGTDAADHTFFSQLLREFGSTEPTRLTSNF 108
Query: 81 PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRII 140
N R Y +G + FVT ILI DLL R+P L G+++ + +++ + F+ R I
Sbjct: 109 SVNERQNAYLAGGVKFVTTNILINDLLAGRIPVDLLTGILVYRAQTVLKSALDAFVLREI 168
Query: 141 KSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVV 200
N + +++AFSD+P+A G K +R + L + ++ PRF +NV L++ P +
Sbjct: 169 IQRNVKCFVKAFSDQPSAFAQGIGKLQRAVSLLQVDRVRFLPRFHINVINALDKAAPDLQ 228
Query: 201 DVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLD- 258
+V V MS ++ + E++ AC++E+R+ N + E LTVE FD ++
Sbjct: 229 EVTVNMSDACRVSERLLNELLTACVQELRQCNTLIPAELLTVEMAATSWFDSAIQNHFGV 288
Query: 259 PIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF---RSVWIFAES 315
+ IL K L+ D+ LR L+D L T+ L + + S W+F E+
Sbjct: 289 DLQDILSSKACLLLKDINRLRHLIDCLESESNRTFASVLTAMFSDKKLFHNNSGWLFTEA 348
Query: 316 SYKIFDYAKK 325
+ K+ KK
Sbjct: 349 AKKLMKEGKK 358
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPS--IKLKVYFLFYEDSTEVQKFKAGIRRENGAF 698
L P +V+Y+ DM VR +E+Y A S +L+V+F+ Y+ S E +K+ +G++RE +F
Sbjct: 458 LNPDNVVIYNADMWIVRHLELYNATACSREKQLRVFFMMYDKSMEERKYLSGLQRERTSF 517
Query: 699 ESLIRQKSFMMIP 711
E L +++ ++IP
Sbjct: 518 EQLFKEEVSLLIP 530
>gi|237842053|ref|XP_002370324.1| DNA excision repair protein, putative [Toxoplasma gondii ME49]
gi|211967988|gb|EEB03184.1| DNA excision repair protein, putative [Toxoplasma gondii ME49]
Length = 1192
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R LY+ G F V+ R+++ DLL+ +LP + +I+++ + E FI R+ +
Sbjct: 340 QRQKLYAKGGCFCVSSRVMVGDLLSGKLPPEVIDCIIVMHAETVCRGFNEAFIVRLYRQR 399
Query: 144 NREAYIRAFSDKPTAM----------VSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
NR ++A D P+A VS F ER MK L+I+K+HL+PR V LE
Sbjct: 400 NRLGGLKAICDNPSAFFSSFLSRRQNVSIFGLLERTMKQLWIQKVHLFPRDASAVQRSLE 459
Query: 194 REP-PVVVDVRVPMSKYMGGIQKAILEVMDACL---KEMRKTNKVDVED---LTVENGLF 246
P ++V + S IQ+AI ++ + L K +R N +V+D L + G F
Sbjct: 460 AAAEPESLEVILRPSASTLEIQRAITLLLQSGLDFLKRVRLLNLENVQDANALILGGGGF 519
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF 306
++F ++ + +WH L KT+Q V+DL LR LL L R DAV + +D L+ S+
Sbjct: 520 ETFAASVKESAEAVWHRLDAKTRQFVADLGVLRNLLWRLYRLDAVAFFSLVDALKSSKVL 579
Query: 307 RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
W+ + + A+ + R D + +K KR+
Sbjct: 580 DPGWMHTTEMHILLHRAQSSLQRIPHRDLLPQRENAKRARYAKRR 624
>gi|221502773|gb|EEE28487.1| DNA excision repair protein, putative [Toxoplasma gondii VEG]
Length = 1192
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R LY+ G F V+ R+++ DLL+ +LP + +I+++ + E FI R+ +
Sbjct: 340 QRQKLYAKGGCFCVSSRVMVGDLLSGKLPPEVIDCIIVMHAETVCRGFNEAFIVRLYRQR 399
Query: 144 NREAYIRAFSDKPTAM----------VSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
NR ++A D P+A VS F ER MK L+I+K+HL+PR V LE
Sbjct: 400 NRLGGLKAICDNPSAFFSSFLSRRQNVSIFGLLERTMKQLWIQKVHLFPRDASAVQRSLE 459
Query: 194 REP-PVVVDVRVPMSKYMGGIQKAILEVMDACL---KEMRKTNKVDVED---LTVENGLF 246
P ++V + S IQ+AI ++ + L K +R N +V+D L + G F
Sbjct: 460 AAAEPESLEVILRPSASTLEIQRAITLLLQSGLDFLKRVRLLNLENVQDANALILGGGGF 519
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF 306
++F ++ + +WH L KT+Q V+DL LR LL L R DAV + +D L+ S+
Sbjct: 520 ETFAASVKESAEAVWHRLDAKTRQFVADLGVLRNLLWRLYRLDAVAFFSLVDALKSSKVL 579
Query: 307 RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
W+ + + A+ + R D + +K KR+
Sbjct: 580 DPGWMHTTEMHILLHRAQSSLQRIPHRDLLPQRENAKRARYAKRR 624
>gi|344302453|gb|EGW32727.1| hypothetical protein SPAPADRAFT_70727 [Spathaspora passalidarum
NRRL Y-27907]
Length = 972
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 182/395 (46%), Gaps = 56/395 (14%)
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
EIT D + R T+YS G I +T R+L+VDLL+ + ++ GL IL+ + E S E+
Sbjct: 139 EITGDSQSGKRKTIYSEGGIISITSRVLVVDLLSGMISPHDITGLFILHAERIKETSNES 198
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE- 193
FI + + N +I+AFSD P + V GF +K L + + LWPR+ + +S+
Sbjct: 199 FIVSLYRDQNEWGFIKAFSDSPESFV-GFTPLATKLKVLRLSNVFLWPRYHLTISQSFNI 257
Query: 194 ----REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKS 248
V+++ +S M IQ AIL + ACL E+++ N ++ E +EN
Sbjct: 258 VKKGETRKNVIEINTKLSYKMNKIQSAILSCIQACLGELKRHNAELATEYWDMENVHDPD 317
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
F +R L+ WH + TK LV DL TL LL+ L+ D+V+Y +++
Sbjct: 318 FVRNIRLSLESQWHRVTYTTKILVVDLGTLLNLLNGLLTLDSVSY------------YQA 365
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT-GKKRKLKKVDNNEDEDGGTSS 367
V +++ K + T S + LN + ++ K+R L K DN
Sbjct: 366 VQGIVDANIK----HQSSSMNATMSPWLNLNESNTIISYAKERALGKYDN---------- 411
Query: 368 TSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDE 427
E +LEE PKW L ++++I E K SS + D G +L+ C
Sbjct: 412 -------EYILEELPKWSELGMLIDDILYE--KSMSSLK---------DQGPILIMCSSS 453
Query: 428 CSCMQLEDCIRNGS-EKVM---REEWEKYLLSKVQ 458
QL + E+V R KY++ KV
Sbjct: 454 RIAKQLNRLLETMKLEQVADLKRFSARKYMIGKVH 488
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
+ Y ++D +L L P I++Y P+++F+R++E+++A N KV+ L+Y +S E Q
Sbjct: 614 IQAYNEDNDLSLLQELSPSHIIMYEPNLTFMRRVEIFQAINHDNPAKVFLLYYGNSIEEQ 673
Query: 686 KFKAGIRRENGAFESLIRQK 705
K I++E AF LI++K
Sbjct: 674 KHLIRIKKEKEAFTKLIKEK 693
>gi|149240381|ref|XP_001526066.1| hypothetical protein LELG_02624 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450189|gb|EDK44445.1| hypothetical protein LELG_02624 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1053
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 168/375 (44%), Gaps = 71/375 (18%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
+ D ++ R T Y +G + ++ R+L+VD+L+ + +++ GL + + + E S F
Sbjct: 164 LAGDSLSSKRKTAYQNGGVIAISARVLVVDMLSGMVDPNDITGLFVFHAERIRETSNNAF 223
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE 195
I + + N+ +++AFSD+P + SGF MK L + + LWPRF V V++ +
Sbjct: 224 IINLYRDKNKWGFVKAFSDEP-ELFSGFTPLATRMKVLRLSNVILWPRFHVTVTQSFKYH 282
Query: 196 P-----PVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDV-EDLTVENGLFKSF 249
V +V V +S M IQ A+L + ACL EM++ N V E +EN F
Sbjct: 283 KGNEARKFVTEVNVKLSYKMNRIQSALLACIQACLGEMKRHNPTLVTEYWDMENVHDPDF 342
Query: 250 DEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL--------- 300
+ +R LD WH L TKQLV DL L +LLD L+ D+VT+ + + ++
Sbjct: 343 VKKVRHPLDSQWHRLTYTTKQLVGDLGVLLELLDALLTVDSVTFYQMIKSIVDANVKQQS 402
Query: 301 -RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNE 359
++ S S W+ + S + YAK R
Sbjct: 403 TGINRSM-SPWLNLDESQTVISYAKDRAL------------------------------- 430
Query: 360 DEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE-IEEERLKQASSREEVLLDGEENDHG 418
GT S VLEE PKW L +++++ I E+ L Q +EN G
Sbjct: 431 ----GTLEGSY------VLEELPKWSHLGQLIDDAIYEKTLSQ-----------DENRKG 469
Query: 419 IVLVACKDECSCMQL 433
+L+ C QL
Sbjct: 470 PILIMCSSRKVAKQL 484
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 616 ESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYF 675
E DS + Y + L+ L P I++Y PD+SF+R++E+Y+A +VYF
Sbjct: 685 EYVDSDDQIIIQVYNEKYSASFLEELSPSFIIMYQPDLSFIRRVEIYQATRGVDAAQVYF 744
Query: 676 LFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
++Y DS E QK I++E AF LI++K+
Sbjct: 745 MYYGDSVEEQKHLLRIKKEKEAFTRLIKEKA 775
>gi|290999116|ref|XP_002682126.1| predicted protein [Naegleria gruberi]
gi|284095752|gb|EFC49382.1| predicted protein [Naegleria gruberi]
Length = 219
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 129/216 (59%), Gaps = 9/216 (4%)
Query: 24 LSSGLSLPKLIASVLL-LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPL-----LPSEIT 77
++ GL + +I L PSQ L+L+ +S + ++I L + L LP IT
Sbjct: 1 MAKGLGIEIMITHFLRKFCDPSQ--LVLIINSKPYEEELIKQLLLESGLIKIENLPKSIT 58
Query: 78 ADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFIC 137
+ N R LY+ G F+T RILIVDLL ++P +++G+++LN H +T+ STE+FI
Sbjct: 59 STFTINERVELYNQGGCLFITSRILIVDLLNDKVPIKHVSGIVVLNAHEITDKSTESFIL 118
Query: 138 RIIKSLN-REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREP 196
R+ + N +A+++AF++ + GF++ E++M+ LFI ++ PRF + VS+ L +
Sbjct: 119 RVFRLSNSMDAFVKAFTENAEELTKGFSRMEQLMRLLFIDRVEFKPRFDLEVSQSLMKYQ 178
Query: 197 PVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
P+V ++ VPMS+ M I+ AI++++ + ++K N
Sbjct: 179 PIVKEIIVPMSQKMRLIENAIIDIITTAINSLKKNN 214
>gi|238883892|gb|EEQ47530.1| hypothetical protein CAWG_06110 [Candida albicans WO-1]
Length = 970
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 43/368 (11%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-LHSP---------SQGTLLLLS 52
L++ Q I+ + L + GL+I+ GL + A++L L +P +G + +L+
Sbjct: 40 LKYQQEIVEDTLTK--DGLLIMGCGLGWDIITANLLYALSTPFVDSRTKKKKRGLIFVLN 97
Query: 53 SSPN----LKSQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDL 106
+ + L+ ++ +++ + I D R LY+ G + ++ R+L+VDL
Sbjct: 98 AQDDELIRLQEEMNDLNWEDESQHERLVIINGDSQPLRRKKLYAEGGVIAISSRVLVVDL 157
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
L+ + +++ GL + + + E S + FI + + N +I+AFSD P + SGF
Sbjct: 158 LSLIVSANDITGLFVFHAERIKETSNDAFIINLYRDNNNWGFIKAFSDDPESF-SGFTPL 216
Query: 167 ERIMKSLFIRKLHLWPRFQVNVSE--------ELEREPPVVVDVRVPMSKYMGGIQKAIL 218
+K L + + LWPRF V +S+ ++ R+ V ++ V ++ M IQ AIL
Sbjct: 217 ATKLKLLRLSNVFLWPRFHVTISQSFNIKNKKDISRKS--VTEISVKLTHNMNKIQSAIL 274
Query: 219 EVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKT 277
+ +CL E+++ N + E +EN + F +R ++ WH + +K +VSDL T
Sbjct: 275 TCIQSCLGELKRHNPTLATEYWDIENVHDRDFVGRIRGSMNSSWHRVSVTSKNIVSDLST 334
Query: 278 LRKLLDYLVRYDAVTYLKYLDTLRVSES--------FRSV--WIFAESSYKIFDYAKKRV 327
L +L L+ D++ + + + + VSES +RS W+ + + + AK+R
Sbjct: 335 LTNMLVGLINLDSIGFYQNVQRI-VSESQKVQAGSKYRSQSPWLNLDEAVTVISCAKERA 393
Query: 328 YRFTRSDG 335
F + DG
Sbjct: 394 --FGKRDG 399
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y + + IL L P I++Y ++ F+R++EVY+A N YF++Y DS E Q
Sbjct: 610 VQAYNDKFNASILQELHPSHIIMYEQNLPFIRRVEVYQAINYENPAHAYFMYYGDSVEEQ 669
Query: 686 KFKAGIRRENGAFESLIRQKS 706
K+ ++RE AF LI++K+
Sbjct: 670 KYLLRVKREKEAFTKLIKEKA 690
>gi|68477619|ref|XP_717122.1| hypothetical protein CaO19.5319 [Candida albicans SC5314]
gi|68477782|ref|XP_717043.1| hypothetical protein CaO19.12779 [Candida albicans SC5314]
gi|46438740|gb|EAK98066.1| hypothetical protein CaO19.12779 [Candida albicans SC5314]
gi|46438822|gb|EAK98147.1| hypothetical protein CaO19.5319 [Candida albicans SC5314]
Length = 399
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%), Gaps = 23/272 (8%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I D R LY+ G + ++ R+L+VDLL+ + +++ GL + + + E S + F
Sbjct: 127 INGDSQPLRRKKLYAEGGVIAISSRVLVVDLLSLIVSANDITGLFVFHAERIKETSNDAF 186
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE----- 190
I + + N +I+AFSD P + SGF +K L + + LWPRF V +S+
Sbjct: 187 IINLYRDNNNWGFIKAFSDDPESF-SGFTPLATKLKLLRLSNVFLWPRFHVTISQSFNIK 245
Query: 191 ---ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLF 246
++ R+ V ++ V ++ M IQ AIL + +CL E+++ N + E +EN
Sbjct: 246 NKKDISRKS--VTEISVKLTHNMNKIQSAILTCIQSCLGELKRHNPTLATEYWDIENVHD 303
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSES- 305
+ F +R ++ WH + +K +VSDL TL +L L+ D + + + + + VSES
Sbjct: 304 RDFVGRIRGSMNSSWHRVSVTSKNIVSDLSTLTNMLVGLINLDCIGFYQNVQRI-VSESQ 362
Query: 306 -------FRSV--WIFAESSYKIFDYAKKRVY 328
+RS W+ + + + AK+R +
Sbjct: 363 KVQAGSKYRSQSPWLNLDEAVTVISCAKERAF 394
>gi|380481588|emb|CCF41753.1| DNA repair protein rad16 [Colletotrichum higginsianum]
Length = 234
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL E LV+L+ GL L +L+ ++L + + L++L + + ++ I
Sbjct: 14 LEYQQSLFQELRNEDE--LVVLARGLGLMRLVTNLLHSYDAAGNNLIILVGADDRENNWI 71
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P+A L T R +Y+ G IF VT RIL+VDLLT L T
Sbjct: 72 GEALAEHAAISMSPSARGLTVVNTDFTSVGAREKMYTRGGIFSVTSRILVVDLLTNLLDT 131
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GLI+L+ + S E FI RI + N+ +++AF+D P +GF+ +M++L
Sbjct: 132 EKVTGLIVLHADRVVATSLEAFILRIYRQKNKAGFLKAFADNPDPFSTGFSPLTTMMRNL 191
Query: 174 FIRKLHLWPRFQVNVSEELE 193
F+RK LWPRF V V++ LE
Sbjct: 192 FLRKASLWPRFHVTVAQSLE 211
>gi|397633965|gb|EJK71209.1| hypothetical protein THAOC_07372 [Thalassiosira oceanica]
Length = 866
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 43/226 (19%)
Query: 147 AYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPM 206
+I+AF+D P+A++ GFAK E+++K+L + KL+L+PRF V+EELE+ PP V ++ P+
Sbjct: 46 GFIKAFTDNPSALLRGFAKVEKVLKALQVPKLYLYPRFHSAVAEELEQNPPKVEELHQPL 105
Query: 207 SKYMGGIQKAILEVMDACLKEM-------------------------------------- 228
+ M IQ + + A ++++
Sbjct: 106 TGKMNEIQDTLAAAIRANIRDLKQKCPLIDFSFSNDTGGGGNKRGRDHGEDQSFLTNYDK 165
Query: 229 --RKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLV 286
R+ N+ + TV + FD +++RQL+ WH L + KQ V DL LR L ++L+
Sbjct: 166 KKRRKNEQENWKATVRQCISTHFDVVIQRQLEGEWHRLSRNVKQSVQDLNRLRSLFEHLL 225
Query: 287 RYDAVTY---LKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYR 329
+D V + L+ L ++ V S WI + S K+F AK R+ R
Sbjct: 226 THDCVQFYGLLEGLKSMSVGSRTPSNWILSSSGEKLFRLAKDRLLR 271
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVY--------KAENPSIKLKVYFLFYEDSTEVQKFK 688
+L+ + P+ +++Y D SF+R +E+Y + + +L+V+FL YE E F
Sbjct: 504 LLNDIDPYAVILYDSDPSFIRSLEIYSNLSKTTSRPSDEDNRLQVFFLLYEACQEHFDFL 563
Query: 689 AGIRRENGAFESLIRQKSFM 708
+ RE AF+ LI + M
Sbjct: 564 KTLDREKDAFDRLIEHRKRM 583
>gi|401881707|gb|EJT45997.1| hypothetical protein A1Q1_05543 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697761|gb|EKD01014.1| hypothetical protein A1Q2_04701 [Trichosporon asahii var. asahii
CBS 8904]
Length = 995
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 168/801 (20%), Positives = 323/801 (40%), Gaps = 176/801 (21%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLP------------KLIASVLLLHSPSQGTLLL 50
L FH+ II E+ + L+I++ GL L K++ ++L + + +L+
Sbjct: 13 LPFHKQIIREICRPQKDDLLIIAKGLGLRRVSSRELMTADLKIVCALLKTYDKKEDLVLV 72
Query: 51 LSSSPNLKSQIIHYLAPNAPLLPSE--ITADLPANHRHTLYSSGQIFFVTPRILIVDLLT 108
+++ P ++ I L P +T ++ + R +Y G ++ VT +IL+ DLL+
Sbjct: 73 INARPEDEAGIGDELGIMGVRDPGFRILTYEMSISERQAMYKGGGLYSVTSKILVTDLLS 132
Query: 109 QR------------LPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKP 156
+R +P + G+++L++ ET++ R+ S N + R
Sbjct: 133 ERTLCALADETEKIVPVELITGIVVLHS--------ETYVYRL-NSSNHQGEARKLGGVC 183
Query: 157 TAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKA 216
A + K ++ +L + + LWPR
Sbjct: 184 RAPLP--EKEPNMLVNLNMNSVMLWPR--------------------------------- 208
Query: 217 ILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLK 276
+D+EDLTV N FK+FD I+ +L P+WH +G KTK V L
Sbjct: 209 ---------------QNLDLEDLTVRNAQFKNFDTIVYMRLRPVWHKVGMKTKIHVQALA 253
Query: 277 TLRKLLDYLVRYDAVTYLKYLDTLRVS-----------ESFRSVWIFAESSYKIFDYAKK 325
LR L +L+ YD+ T+ Y++TL+ + + W A ++ ++ ++
Sbjct: 254 ELRDLQTWLLEYDSATFAAYINTLQRQHFLAQKKTFGPQQYLHDWFNAPAAAELVSASQL 313
Query: 326 RVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLE-EAPKW 384
RV + + + G + ++ + + ++N +G ++ + +E V E EA +
Sbjct: 314 RVSK----PKITIEGTASTLIPDGERHR--ESNATSNGESAREEFEEEMEAVRELEAARD 367
Query: 385 KVLREVLEEIEEERLKQASSREEVLLDGEENDHGIV--------------------LVAC 424
+ + + E E+E + + +S+ E + + + +V
Sbjct: 368 RPIGGIPETEEDEVMVEVASQMETIPQPRQLEIDDNDEDDELQDVTTVEAPPVFRPVVFS 427
Query: 425 KDECSCMQLEDCIRNGSEKVMREEWEKYLLSKV--QLRSVQTSSKKKKSKEPKGYGILDG 482
D ++E +R G E V+ E+ + LL+KV ++ S + + P G
Sbjct: 428 LDADLSSRVETRVRKGHEPVLEEQPKWVLLAKVLKEIEDTIASVSESHANPPFSEG---- 483
Query: 483 VAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRG---K 539
K+ + S+ +++ LA ++ N +D D + K RG
Sbjct: 484 -GGRKMMETLFLSNWQYEKNGDRLANPARYTNGANADQLDASKGAMEKKRQEYRRGVPSY 542
Query: 540 GRNRNGPACVPQSANKDS-KSNS----------KAAIED------KPEISGSG----NEG 578
R R Q + KD+ K N+ ++ED +P+ SG+G +
Sbjct: 543 KRRRQRAGAPMQMSRKDTIKENTMKELSAFASDDTSLEDAQVQSLQPQDSGAGSGEASSA 602
Query: 579 P--ADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKDSKPVPP-----VHFYAL 631
P A+ + ++ +G + E + + +W S D + P + Y
Sbjct: 603 PPLAENATASLLARAGVLEEEDLMPRFHRWMEGEGLLEDWSTDYGLLAPEDSVIIRPYGG 662
Query: 632 ESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGI 691
E D +L L+P +V+Y P+++F+R++E + Y +S E +F A +
Sbjct: 663 EDDDILLQELRPRFVVMYEPNLAFIRRLE---------------MTYTNSFEEDRFLATV 707
Query: 692 RRENGAFESLIRQKSFMMIPI 712
RE AF+ LI + M+IPI
Sbjct: 708 AREAEAFKKLIEDRGGMVIPI 728
>gi|324506753|gb|ADY42875.1| DNA repair endonuclease XPF [Ascaris suum]
Length = 743
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 224/572 (39%), Gaps = 144/572 (25%)
Query: 167 ERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLK 226
+R++ L+IR++ L PRF V+V L+ PP +++V + M +Q A+++++ C+K
Sbjct: 5 QRLVNRLYIRRVRLVPRFDVDVKRVLDLYPPRLIEVTCELPHPMRKVQSALVDIIRTCIK 64
Query: 227 EMRKTNKVDVEDLTVEN-------GLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLR 279
E+++ V D + E+ GL S E+ QL + K ++L++DLK LR
Sbjct: 65 ELKQC--ASVLDTSAEDESTHPSAGLIPSMLEV---QLKAAQFSITDKQQRLLTDLKHLR 119
Query: 280 KLLDYLVRYDAVTYLKYLDTLRVSE---SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGV 336
LL + T L LR + + S W+F ++S K+F A+
Sbjct: 120 TLLYQAEELEPATLYHTLSMLRSDKDQVANNSGWLFTQTSSKLFAEAE------------ 167
Query: 337 ELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEE 396
+ KV + L E PKW L V EEI
Sbjct: 168 -----------------------------AMCKVKVDGDYTLLEPPKWSALSNVFEEI-- 196
Query: 397 ERLKQASSREEVLLDGEENDH------GIVLVACKDECSCMQLEDCIRNGSEKVMREEWE 450
L+ ++NDH I+L+A E C QL + I+ W
Sbjct: 197 ----------RALI--KDNDHLSLKGSPILLLADSSEV-CRQLRNLIK----------WG 233
Query: 451 KYLLSKVQLRSV--QTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLAA 508
K LS +Q R + S K S+EP + D P++I
Sbjct: 234 KRKLSWIQRRQIVDDLPSAKGSSREPPAEPLWD---PMQI-------------------- 270
Query: 509 ASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIEDK 568
T +GS G R N + + A + + K A E+
Sbjct: 271 -----------------TLFGSSAEGESRAD--IVNDVQAIQKLAARQGRKRRKQAEEEM 311
Query: 569 PEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESK-------DSK 621
+ G++ + G+V Y +K V+ D ES DS
Sbjct: 312 KKKKLRGDQPRL--VQFGIVHYKKQSKSADDNDKTVENNEETSADVGESHPEGREEGDST 369
Query: 622 PVPPVHFYALESDQ----PILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLF 677
P+ S++ L P I+++H D+ +R +E+YKA NP L++Y L
Sbjct: 370 EGDPLLVIMPTSERYDLIRQLQAFAPNFIILHHSDLVTLRILEMYKACNPEHDLRIYVLM 429
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMM 709
Y +S E +++ +RRE AFE LIR++ ++
Sbjct: 430 YRESNEEERYLCSLRREQLAFEQLIREQGTLL 461
>gi|150865876|ref|XP_001385267.2| hypothetical protein PICST_19389 [Scheffersomyces stipitis CBS
6054]
gi|149387132|gb|ABN67238.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 388
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 10/218 (4%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R LY G I + R+L+VDLL + ++ GL +L+ L E S +F+ + + N
Sbjct: 128 RKNLYLKGGIISIKSRLLVVDLLAGSISADDITGLFVLHAERLRETSDTSFVVSLFRDEN 187
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-----REPPV- 198
+I+A SD+P + GF +K L + + LWPRF V VS L+ +E
Sbjct: 188 SWGFIKAISDEPESF-GGFTPLATKLKVLRLSNVFLWPRFHVEVSASLKPKGKRKEADTR 246
Query: 199 --VVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRR 255
+++ ++ IQ A++ M+ACL E+R+ N ++ E EN +F +R
Sbjct: 247 QQAIEINTKLTSRSNKIQAALITCMEACLHELRRHNPELATEYWDKENIHDPNFVIRIRI 306
Query: 256 QLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
L+P WH L + +KQL DL+TL LL+ L+ D+V++
Sbjct: 307 SLNPQWHRLSRTSKQLYFDLETLTGLLNKLLSMDSVSF 344
>gi|341881150|gb|EGT37085.1| hypothetical protein CAEBREN_24516 [Caenorhabditis brenneri]
Length = 462
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 207/461 (44%), Gaps = 67/461 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + +A+ L P L +++SGL L +L L+L S + L+L+++ + +S
Sbjct: 24 LLEYERATLAKTL--PASVLFVVASGLGLERLFLEHLILFSDRRLLALVLNTNEHDESYF 81
Query: 62 IHYLAP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+ L N P I +D+ R ++Y G + F + R+L+VDLL R+PT +A ++
Sbjct: 82 VSKLKEHNVNCEPKIINSDVSVKDRQSIYLEGGVQFCSSRVLLVDLLQNRIPTDRIAAVL 141
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H ++FI R+ + + ++AF+D P + S + +R++ L++R + L
Sbjct: 142 VYRAHQTLNAFQDSFILRLYREKKPDGMVKAFTDVPNTL-SSLGQLQRLVDRLYVRHVEL 200
Query: 181 WPRFQVNVSEELER----EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDV 236
PRF + EL R VDV P+ + + + ++E + C++++R ++
Sbjct: 201 MPRFSNIIETELNRYQLKTAIFSVDVPTPLRR----VHRTLIEFIKVCVRDLRTSSTSGK 256
Query: 237 EDLTVENGLFK---SFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
+ + + ++ +R D HI +K ++L++DL +LR++L D T
Sbjct: 257 QSDDQNEEMVHVPWATTQLEKRLRDRRGHI-SEKQQRLLNDLASLREILQLSENMDVATV 315
Query: 294 LKYLDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
L L L+ + S W+ + S +I + D + + G VT K
Sbjct: 316 LSRLQMLKNDRTVLEEHSGWLLSPSFGRIME------------DLLTIAG----VTNGKG 359
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLL 410
KK KW VL EVL E++ +L++
Sbjct: 360 DQKK-----------------------FSTPAKWTVLAEVLREVKNIQLEKK-------- 388
Query: 411 DGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
D + + +V++ ++ S Q D I+ G +K+ W++
Sbjct: 389 DYKHSTPSVVVITNSEDLS-RQAADVIKYGIDKIKWMTWKQ 428
>gi|241952392|ref|XP_002418918.1| DNA repair protein Rad1 homologue, putative [Candida dubliniensis
CD36]
gi|223642257|emb|CAX44226.1| DNA repair protein Rad1 homologue, putative [Candida dubliniensis
CD36]
Length = 970
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 173/366 (47%), Gaps = 39/366 (10%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-LHSP---------SQGTLLLLS 52
L++ Q I+ + L + GL+I+ GL + A++L L +P +G + +L+
Sbjct: 40 LKYQQEIVEDTLTK--DGLLIMGCGLGWDIITANLLYALSTPFVDSRTKKKKRGLIFVLN 97
Query: 53 SSPN----LKSQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDL 106
+ + L+ ++ +++ + I D R LY+ G + ++ R+L+VDL
Sbjct: 98 AQDDELIRLQEEMNDLNWEDESQQERLVVINGDSLPLRRKKLYAEGGVVAISSRVLVVDL 157
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
L+ + ++ GL I + + E S + F+ + + N +I+AFSD + GF
Sbjct: 158 LSLIVSADDITGLFIFHAERIKETSNDAFVINLYRDNNNWGFIKAFSDDSESF-GGFTPL 216
Query: 167 ERIMKSLFIRKLHLWPRFQVNVSEELEREP------PVVVDVRVPMSKYMGGIQKAILEV 220
+K L + + LWPRF V +S+ + ++ V ++ M IQ AIL
Sbjct: 217 ATKLKILRLSNVFLWPRFHVTISQSFNIKNKKDMLRKSATEISVKLTYNMNQIQSAILTC 276
Query: 221 MDACLKEMRKTN-KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLR 279
+ ACL E+++ N + E +EN F +R +D WH + +KQ+VS L TL
Sbjct: 277 IQACLGELKRHNPTLATEYWEMENVHDPDFVRRIRGSMDSSWHRVSFTSKQIVSSLSTLT 336
Query: 280 KLLDYLVRYDAVTYLKYLDTLRVSESFR----------SVWIFAESSYKIFDYAKKRVYR 329
+L L+ D++ + + + + V+E+ + S W+ + + KI AK+R
Sbjct: 337 NMLVGLMNLDSIAFYQNVQRI-VNENQKRQAGSIHRSQSPWLNLDEAVKIISCAKERA-- 393
Query: 330 FTRSDG 335
F + DG
Sbjct: 394 FGKRDG 399
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y + + IL L P I++Y +++F+R++E+Y+A N YF++Y DS E +
Sbjct: 610 VQAYNDKFNASILQELHPSHIIIYEQNLAFIRRVEMYQAINHENPAHAYFMYYGDSVEEE 669
Query: 686 KFKAGIRRENGAFESLIRQKS 706
K ++RE AF LI++K+
Sbjct: 670 KHLRRVKREKEAFTKLIKEKA 690
>gi|17532461|ref|NP_496498.1| Protein C47D12.8 [Caenorhabditis elegans]
gi|6782250|emb|CAA93766.2| Protein C47D12.8 [Caenorhabditis elegans]
Length = 935
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 205/469 (43%), Gaps = 83/469 (17%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + +A+ L P L ++++GL L +L L+L S + L+L+++ + +S
Sbjct: 24 LLEYERATLAKTL--PASVLFVVANGLGLERLFLEHLILFSDRRLLALVLNTNEHDESYF 81
Query: 62 IHYLAP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+ L N P I +++ R ++Y G + F + R+L+VDLL R+PT +A +
Sbjct: 82 VSKLKEHNVECDPKVINSEVSIKDRQSIYLEGGVQFCSSRVLLVDLLQNRIPTDRIAAIF 141
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H ++FI R+ + + ++AF+D P ++ S + +R++ L+IR + L
Sbjct: 142 VYRAHQTLNAFQDSFILRLYREKKPDGTVKAFTDFPNSL-SSLGQLQRLVDRLYIRHVEL 200
Query: 181 WPRFQVNVSEELER----EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR------- 229
PRF + EL R VDV P+ + + + I+E + C++++R
Sbjct: 201 MPRFSSIIESELNRYQLKTAIFSVDVPTPLRR----VHRTIIEFIKVCVRDLRTCSTSGK 256
Query: 230 KTNKVDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYD 289
+T++ + E + V + + +R D HI +K ++L++D+ +LR++L D
Sbjct: 257 QTDEQNEEMIHVPWAATR----LEKRLHDRRGHI-SEKQQRLLNDVASLREILQLSENMD 311
Query: 290 AVTYLKYLDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVT 346
T L L L+ + S W+ + S +I + D + + G VT
Sbjct: 312 VATVLSRLQVLKNDRTVLEEHSGWLLSPSFNRIME------------DLLTIAG----VT 355
Query: 347 GKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSRE 406
K KK KW VL E+L EI+
Sbjct: 356 NGKADYKK-----------------------FATPAKWTVLSEILREIK----------- 381
Query: 407 EVLLDGEENDHG----IVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
+L E+ D G VLV E Q+ D +R G K+ W +
Sbjct: 382 --MLPVEKKDRGNDSPSVLVITSSEDLSRQVTDVVRYGINKMKWMTWRQ 428
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L+ KP IV+Y + +RQIE+Y++ NP+ L VY+L Y +STE ++ I RE
Sbjct: 568 LLETKKPRAIVLYTMSLQTLRQIEIYRSTNPNRSLHVYWLQYTESTEESRYLESINRETM 627
Query: 697 AFESLIRQKSFMMI 710
+FE LIR++ ++I
Sbjct: 628 SFELLIREQGTLLI 641
>gi|341895573|gb|EGT51508.1| hypothetical protein CAEBREN_09583 [Caenorhabditis brenneri]
Length = 481
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 206/461 (44%), Gaps = 67/461 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + +A+ L P L +++SGL L +L L+L S + L+L+++ + +S
Sbjct: 24 LLEYERATLAKTL--PASVLFVVASGLGLERLFLEHLILFSDRRLLALVLNTNEHDESYF 81
Query: 62 IHYLAP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+ L N P I +D+ R ++Y G + F + R+L+VDLL R+PT +A ++
Sbjct: 82 VSKLKEHNVNCEPKIINSDVSVKDRQSIYLEGGVQFCSSRVLLVDLLQNRIPTDRIAAVL 141
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H ++FI R+ + + ++AF+D P + S + +R++ L++R + L
Sbjct: 142 VYRAHQTLNAFQDSFILRLYREKKPDGMVKAFTDVPNTL-SSLGQLQRLVDRLYVRHVEL 200
Query: 181 WPRFQVNVSEELER----EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDV 236
PRF + EL R VDV P+ + + + ++E + C++++R ++
Sbjct: 201 MPRFSNIIETELNRYQLKTAIFSVDVPTPLRR----VHRTLIEFIKVCVRDLRTSSTSGK 256
Query: 237 EDLTVENGLFK---SFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTY 293
+ + + ++ +R D HI +K ++L++DL +LR++L D T
Sbjct: 257 QSDDQNEEMVHVPWATTQLEKRLRDRRGHI-SEKQQRLLNDLASLREILQLSENMDVATV 315
Query: 294 LKYLDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR 350
L L L+ + S W+ + S +I + D + + G VT K
Sbjct: 316 LSRLQMLKNDRTVLEEHSGWLLSPSFGRIME------------DLLTIAG----VTNGKG 359
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLL 410
KK KW VL EVL E++ +L++
Sbjct: 360 DQKK-----------------------FSTPAKWTVLAEVLREVKNIQLEKK-------- 388
Query: 411 DGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
D + +V++ ++ S Q D I+ G +K+ W++
Sbjct: 389 DYNHSTPSVVVITNSEDLS-RQAADVIKYGIDKIKWMTWKQ 428
>gi|302419477|ref|XP_003007569.1| DNA repair protein rad16 [Verticillium albo-atrum VaMs.102]
gi|261353220|gb|EEY15648.1| DNA repair protein rad16 [Verticillium albo-atrum VaMs.102]
Length = 225
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
LE+ Q + EL + LV+++ GL L +L+ ++L + + L+++ + + ++ I
Sbjct: 15 LEYQQTLFQELRSDDE--LVVIAKGLGLMRLVTNLLHSYDAAGNNLIIIVGAEDRENAWI 72
Query: 63 H---------YLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
++P A L T R +Y+ G IF +T RILIVDLLT L
Sbjct: 73 GEALAEHAAISMSPKARGLTVVNTDFTSVGAREKMYARGGIFSITSRILIVDLLTSLLNP 132
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ GL++L+ + S E FI RI + NR +++AFSD P +GF+ +M++L
Sbjct: 133 ETVTGLVVLHADRVVATSLEAFILRIYRQKNRAGFLKAFSDNPDPFATGFSPLSTMMRNL 192
Query: 174 FIRKLHLWPRFQVNVSEELE 193
F++K LWPRF V V+E LE
Sbjct: 193 FLKKASLWPRFHVTVAESLE 212
>gi|308509814|ref|XP_003117090.1| hypothetical protein CRE_02256 [Caenorhabditis remanei]
gi|308242004|gb|EFO85956.1| hypothetical protein CRE_02256 [Caenorhabditis remanei]
Length = 640
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 203/460 (44%), Gaps = 65/460 (14%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + +A+ L P L +++SGL L +L L+L S + ++L+++ + +S
Sbjct: 140 LLEYERATLAKTL--PASVLFVVASGLGLERLFLEHLILFSDRRLLAIVLNTNEHDESYF 197
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+ L ++ P I +D+ R ++Y G + F + R+L+VDLL R+PT +A +
Sbjct: 198 VSKLKEHSVDCDPKVINSDVSVKDRQSIYLEGGVQFCSSRVLLVDLLQNRIPTDRVAAIF 257
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H ++FI R+ + + ++AF+D P + S + +R++ L++R + L
Sbjct: 258 VYRAHQTLNAFQDSFILRLYREKKPDGMVKAFTDVPNTL-SSLGQLQRLVDRLYVRHVEL 316
Query: 181 WPRFQVNVSEELE----REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV-- 234
PRF + EL + VDV P+ + + + ++E + C++++R ++
Sbjct: 317 LPRFSNIIETELNKYQLKTAIFSVDVPTPLRR----VHRTLIEFIKVCVRDLRTSSLAGK 372
Query: 235 DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294
+D E +L ++L + +K ++L++D+ +LR++L D T L
Sbjct: 373 HADDQLEEMVHVPWASTLLEKRLRDRRGNISEKQQRLLNDVASLREILQLSENMDVATVL 432
Query: 295 KYLDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK 351
L L+ + S W+ + S +I + D + + G VT K
Sbjct: 433 SRLQVLKNDRTVLEEHSGWLLSPSFNRIME------------DLLTIAG----VTNGKGD 476
Query: 352 LKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLD 411
KK KW VL EVL EI+ +L++ +
Sbjct: 477 PKK-----------------------FSVPAKWTVLTEVLREIKNIQLEKKEYK------ 507
Query: 412 GEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
N++ VL+ E Q+ D +R G K+ W +
Sbjct: 508 ---NNNPSVLIITSSEDLSRQVTDVVRYGMNKMKWMTWRQ 544
>gi|281208428|gb|EFA82604.1| DNA excision repair protein 4 [Polysphondylium pallidum PN500]
Length = 731
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 37/236 (15%)
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
+++ LF SFD +L +QL PIW + K+TKQ + ++K LR L L+ YD +T+LK L+++
Sbjct: 1 MDDTLFNSFDSMLHQQLKPIWGDINKQTKQTIGNIKVLRTLSTSLLAYDCITFLKLLESV 60
Query: 301 RVSES-FRSVWIFAESSYKIFDYAKKRVYRFTR---------SDGVELNGQSKSVTGKKR 350
++E+ + WI E++ +F +A++RVY T+ D N + K+ K
Sbjct: 61 AITEAEDENSWIHTETANTLFRHARERVYIQTKLNLNKKDKDKDNHSPNKKQKTTKDNKD 120
Query: 351 KLKKVDNNEDEDGGTSSTSTKVVL---------------EEVLEEAPKWKVLREVLEEIE 395
K K +NN ED T+ST E +LEE PKW +L +VLEEIE
Sbjct: 121 KDKDDNNNNSEDESTTSTKNNNSDNNDNNNKQSQNIFKRELILEENPKWNLLLQVLEEIE 180
Query: 396 EERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
+ K+ +D EN VLV KDE +C QL+D + G ++ +++
Sbjct: 181 DINRKR--------MDEPEN----VLVIVKDERTCQQLQDYLNIGGYDMLSNRYDR 224
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%)
Query: 624 PPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTE 683
P V + L+ IL+ L+P IV+Y ++S RQIEVY+AENP+I++ VY LFY +STE
Sbjct: 345 PHVVIHPLDQSLSILNELRPRFIVIYDLEISITRQIEVYQAENPAIQIGVYLLFYGESTE 404
Query: 684 VQKFKAGIRRENGAFESLIRQKSFMMI 710
+K+ + + RE +FE LIR+K+ +++
Sbjct: 405 ERKYLSVLNREKSSFEKLIREKANLVV 431
>gi|401827326|ref|XP_003887755.1| ERCC4-type nuclease [Encephalitozoon hellem ATCC 50504]
gi|392998762|gb|AFM98774.1| ERCC4-type nuclease [Encephalitozoon hellem ATCC 50504]
Length = 733
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 228/508 (44%), Gaps = 48/508 (9%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
M+LE+ + + E E L+++ GL++ +I ++ + +LL++ S +S
Sbjct: 1 MLLEYEEEALREC--EGQSCLLVMGGGLNIQGIIREMIKQYLHKNSLVLLVNFSSEDESL 58
Query: 61 IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
++ +P + S L R Y G +F + + + D++ + + ++
Sbjct: 59 LLRMESPFLQDIRS-----LHKTKRREKYRHGGVFIASNSVFLADMIDGVVDVEKVDAIL 113
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ N A+TE S+E+FI +S N+ IR FS+ P + GF+ +R MKSL + +
Sbjct: 114 VNNVEAITETSSESFIAHFFRSRNKTGVIRGFSESPVPLSLGFSPLDRKMKSLKLTRAVF 173
Query: 181 WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLT 240
+PRF V + L R+ V +++ MS+ +Q +LE+++ L+ + K E++
Sbjct: 174 FPRFHFLVEKSLRRDID-VAEIKFKMSERGSQLQVILLEIINNLLRIVFKGP--SREEVD 230
Query: 241 VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL 300
E +F S +I R+ + +++ DL +R L+ L D T+ +Y+ +
Sbjct: 231 AETIIFGSVHKIFRQ--------MNISNSRIMEDLYDIRGLIFLLFSCDPGTFYEYVKEI 282
Query: 301 ---RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
++ WI S+ + D +++ + VE +++ + G +K +K
Sbjct: 283 VKKQIELGKDGTWINLSISHVLIDESREYF-----EEAVE---KARDLAGGDKKRRKAGT 334
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
+DE G S + PK K L E+L+E +K+ASS V G +N
Sbjct: 335 EKDELGDLPGFSNERP-RTFYTLNPKIKKLVEILQE-----MKEASSVVLVSSRGVKNMV 388
Query: 418 GIVLVA---CKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRSVQTSSKKKKSKEP 474
+LVA EC +Q G+ KVM KY + ++ S + ++
Sbjct: 389 TKILVAFGLVSGECIEIQ------EGAVKVMTHYEFKYYEESYE-SAIFVESGQDSVRKI 441
Query: 475 KGYGILDGVAPVKIAQNAEASSVSKQEH 502
+ YG+ V PVK+ + S+ +Q +
Sbjct: 442 ERYGV---VHPVKVFFLMHSESLEEQRY 466
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
VR+IE Y +P +KV+FL + +S E Q++ + IRRE +FE LI +++ + + +D
Sbjct: 438 VRKIERYGVVHP---VKVFFLMHSESLEEQRYLSEIRREKTSFEKLIEERARLPLRLD 492
>gi|268532382|ref|XP_002631319.1| Hypothetical protein CBG03141 [Caenorhabditis briggsae]
Length = 927
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 206/458 (44%), Gaps = 61/458 (13%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L++ + +A+ L P L +++SGL L +L L+L S + L+L+++ + +S
Sbjct: 17 LLQYERATLAKTL--PASVLFVVASGLGLERLFLEHLILFSDRRLLALVLNTNEHDESYF 74
Query: 62 IHYLAPNA-PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
+ L ++ P I +++ R ++Y G + F + R+L+VDLL R+P +A +
Sbjct: 75 VSKLKEHSVDCDPKVINSEVSIKDRQSIYLEGGVQFCSSRVLLVDLLQNRIPVDRIAAIF 134
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ H ++FI R+ + + ++AF+D P + S + +R++ L+IR + L
Sbjct: 135 VYRAHQTLNAFQDSFILRLYREKKPDGMVKAFTDVPNVL-SSLGQLQRLVDRLYIRHVEL 193
Query: 181 WPRFQVNVSEELERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE- 237
PRF + EL R + V VP + + + + ++E + C++++R ++ +
Sbjct: 194 MPRFSSIIETELNRYQLKTAIFSVDVPTA--LRRVHRTLIEFIKVCVRDLRTSSLSGKQT 251
Query: 238 DLTVENGLFKSFDEI-LRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKY 296
D VE + + L ++L + +K ++L++D+ +LR++L D T L
Sbjct: 252 DEPVEEMIHVPWATTQLEKRLRDRRGNISEKQQRLLNDVASLREILQLSENMDVATVLSR 311
Query: 297 LDTLRVSESF---RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLK 353
L L+ + S W+ + S +I + D + + G VT K K
Sbjct: 312 LQVLKNDRTVLEEHSGWLLSPSFNRIME------------DLLTIAG----VTNGKGDSK 355
Query: 354 KVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGE 413
K KW VL EVL EI+ L++ + +
Sbjct: 356 K-----------------------FAVPAKWTVLAEVLREIKNIPLEKK--------EYK 384
Query: 414 ENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEK 451
+N ++++ ++ S Q+ D +R G K+ W +
Sbjct: 385 DNSPSVLIITNSEDLS-RQVTDVVRYGINKMKWMTWRQ 421
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L+ KP +V+Y + +RQIE+Y++ NP+ +L VY+L Y +STE ++ I RE
Sbjct: 563 LLEQKKPSAMVLYTMSLQTLRQIEIYRSTNPNKQLHVYWLQYTESTEESRYLESINRETL 622
Query: 697 AFESLIRQKSFMMI 710
+FE LIR++ +MI
Sbjct: 623 SFEMLIREQGTLMI 636
>gi|294899843|ref|XP_002776771.1| dna repair endonuclease xp-f / mei-9 / rad1, putative [Perkinsus
marinus ATCC 50983]
gi|239883972|gb|EER08587.1| dna repair endonuclease xp-f / mei-9 / rad1, putative [Perkinsus
marinus ATCC 50983]
Length = 909
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 163/354 (46%), Gaps = 41/354 (11%)
Query: 3 LEFHQHI---IAELLQEPNGGLVILSSGLSLPKLIASVLL---LHSPSQGTLLLLSSSPN 56
L +H I I L+ G LV++ GL + +L++++L P L+L+ ++
Sbjct: 25 LSYHHRIAEHIESKLRAGGGALVVMGQGLGVCELVSALLRRLQACRPVGEPLILIMNARE 84
Query: 57 LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNL 116
+++ I + +TAD+ R +Y +G +T RIL+ DLLT RL T +
Sbjct: 85 GEAECIGA---------TPVTADVAPAQRDEMYLAGGCLSITSRILVTDLLTNRLTTEIV 135
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNRE--AYIRAFSDKPTAMVSGFAKTERIMKSLF 174
AG+++LN H + E F C + + ++ +I AF+D P + E +++ L
Sbjct: 136 AGVVVLNAHG--SSHCEQFACELYRERKQKGRGFIAAFTDNPIRCRT-LMNVESLLRELQ 192
Query: 175 I--RKLHLWPRFQVNVSEELE--------REPPVVVDVRVPMSKYMGGIQKAILEVMDAC 224
I + L PRF+ V + + P V + +P+ + +K + +++A
Sbjct: 193 IGSTSIVLVPRFRSEVMDTFKPSEGDANVAAPSGVRVLSIPLPAQIAEAEKTLNTILEAN 252
Query: 225 LKEMRKTNK-VDVEDLTVENGLFKS-------FDE--ILRRQLDPIWHILGKKTKQLVSD 274
+++ K+ +D + GL K D LR QL +W LG++T+ ++ D
Sbjct: 253 FEDISKSKGIIDAGIVIFPQGLPKGSLRGLAVIDNWFTLRSQLSMVWDQLGRRTQNMIRD 312
Query: 275 LKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVY 328
L KL L DA + L +S S W+ A +++++ A++R+Y
Sbjct: 313 ADALEKLAHKLRSGDATAFFVSL-LESISAHPDSPWVNAGATHQLISQARQRLY 365
>gi|67624749|ref|XP_668657.1| UV endonuclease; Rad1p [Cryptosporidium hominis TU502]
gi|54659867|gb|EAL38429.1| UV endonuclease; Rad1p [Cryptosporidium hominis]
Length = 632
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 12/271 (4%)
Query: 68 NAPLLPSEITA---DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
N LL S++ A ++ N R YS+G I+ +T RIL+ DLL+++L S++ G+I+ N
Sbjct: 84 NGSLLSSKLVAINSEMNLNKRKAFYSNGGIYIITSRILLTDLLSEKLDFSHIDGIILFNA 143
Query: 125 HALT-ENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPR 183
+L N + FI ++ KS N +I+ S +P + G+ M+ L L L+PR
Sbjct: 144 ESLNVRNWNDAFILQLFKSKNPNGFIKGISQRPEILNQGYFGPGITMRYLGATDLFLYPR 203
Query: 184 FQVNVSEELEREPPV-VVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVE 242
+ V E + + V++ V ++Y IQK I +++ L E+ K N ++E LT+
Sbjct: 204 NNIIVEESFKLTQKIKVIEKSVKATEYFYVIQKCIKILLEKGLHEILKFNP-NIE-LTMY 261
Query: 243 NGLFKSFDEILRRQLDP----IWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ L+ S + L+ +++ +W+ + K KQ+ D+ +LR LL+ L DA + L+
Sbjct: 262 DLLYNS-SKKLKNKIESLTQDLWYKMTSKHKQITKDIISLRNLLELLYLSDASEFFFCLE 320
Query: 299 TLRVSESFRSVWIFAESSYKIFDYAKKRVYR 329
+R S+ + W+ ++ ++ R++R
Sbjct: 321 CIRSSKLIDTSWMLTTEFETLYKVSRSRIFR 351
>gi|66357408|ref|XP_625882.1| RAD1, NH2 terminal ERCC4-like helicase domain [Cryptosporidium
parvum Iowa II]
gi|46226847|gb|EAK87813.1| RAD1, NH2 terminal ERCC4-like helicase domain [Cryptosporidium
parvum Iowa II]
Length = 631
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 172/353 (48%), Gaps = 29/353 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGT--LLLLSSSPNLKS 59
+L F + I+ ++ L+ILS GL + +I + L + G +L S P + S
Sbjct: 3 LLPFQKSILNDI-NNHKSCLIILSKGLGIFNIIYNYLTNTEINSGNSIFILNLSVPEVDS 61
Query: 60 ---------QIIH-----YLAPNAPLLPSEITA---DLPANHRHTLYSSGQIFFVTPRIL 102
Q H N LL S++ A ++ N R YS+G I+ +T RIL
Sbjct: 62 FKLFVQNMDQKQHDKNKDKFTRNGSLLSSKLVAINSEMNLNKRKAFYSNGGIYIITSRIL 121
Query: 103 IVDLLTQRLPTSNLAGLIILNTHALT-ENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DLL+++L S++ G+I+ N +L N + FI ++ KS N +I+ S +P +
Sbjct: 122 LTDLLSEKLDFSHIDGIILFNAESLNVRNWNDAFILQLFKSKNPNGFIKGISQRPEILNQ 181
Query: 162 GFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPV-VVDVRVPMSKYMGGIQKAILEV 220
G+ M+ L L L+PR V E + + V++ V ++Y IQK I +
Sbjct: 182 GYFGPGITMRYLGATDLFLYPRNNTIVEESFKLTQKIKVIEKSVKATEYFYVIQKCIKIL 241
Query: 221 MDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDP----IWHILGKKTKQLVSDLK 276
++ L E+ K N ++E LT+ + L+ S + L+ +++ +W+ + K KQ+ D+
Sbjct: 242 LEKGLHEILKFNP-NIE-LTMYDLLYNS-SKKLKNKIESLTQDLWYKMTSKHKQITKDII 298
Query: 277 TLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYR 329
+LR LL+ L DA + L+ +R S+ + W+ ++ ++ R++R
Sbjct: 299 SLRNLLELLYLSDASEFFFCLECIRSSKLIDTSWMLTTEFETLYKVSRSRIFR 351
>gi|71027543|ref|XP_763415.1| DNA repair endonuclease [Theileria parva strain Muguga]
gi|68350368|gb|EAN31132.1| DNA repair endonuclease, putative [Theileria parva]
Length = 1380
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 147/277 (53%), Gaps = 21/277 (7%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I + ++ R LY +G F + R+L+ D+LT ++ + G++++N H +TE+ F
Sbjct: 307 IDGSVVSSSRQQLYVNGGYFCINTRVLLNDILTSKILPEIIGGIVVMNAHQITEDCNIAF 366
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE 195
+ R+++ N+ A+++A S+ G T +K++F + ++L+PR ++ L
Sbjct: 367 VIRLLRMRNKVAFVKAISNN-VHCFKGHNLT-YCLKNVFTKNVNLFPRCHQSIENVLNDT 424
Query: 196 --PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTVENGLFKSFDEI 252
PV +V +P+S+ +IL+++ ++ M++ +VD+ + K +
Sbjct: 425 LVQPVTFEVSLPLSEIASEAYNSILKIIWTIVQSMKRLKYEVDMNKIVYTTN--KLLIRL 482
Query: 253 LRRQLDP--IWHILGKKTK--QLVSD------LKTLRKLLDYLVRYDAVTYLKYLDTLRV 302
LR+Q ++H L KT+ QL S L R+LLD+L+ D +T+L+ LD + +
Sbjct: 483 LRKQAKSTKVYHHLQNKTQNTQLSSKDFYIDVLLKFRRLLDHLLYTDPITFLEELDNI-I 541
Query: 303 SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELN 339
+E+ S W+ + K+F + +R+++ +D +ELN
Sbjct: 542 TEN--SNWVCTPNGIKLFKKSNERLFKI-ENDKIELN 575
>gi|209877923|ref|XP_002140403.1| ERCC4 domain-containing protein [Cryptosporidium muris RN66]
gi|209556009|gb|EEA06054.1| ERCC4 domain-containing protein [Cryptosporidium muris RN66]
Length = 945
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 165/362 (45%), Gaps = 24/362 (6%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL--LLHSPSQGTLLLLSSSP------N 56
++Q I L + LVI S GL L +I L + H +++LL+ + N
Sbjct: 3 YYQKCILNDLIKNRLCLVIFSRGLGLNDIIYYFLKEINHEKRCKSVILLNMTNIEVECLN 62
Query: 57 LKSQII-----HYLAPNA---PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLT 108
+++I+ YL N L ITAD+ + R +Y SG F +T RIL D L+
Sbjct: 63 ERARILDKMDRSYLQGNGLGKTNLVDPITADISLSKRLNIYESGGTFMITSRILTTDALS 122
Query: 109 QRLPTSNLAGLIILNTHAL-TENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTE 167
+L + + G+I++N +L +N + FI ++ K N +I+ S +P + G+
Sbjct: 123 GKLDFTKVEGIIVMNAESLNNKNWNDAFILQVYKQKNPNGFIKGLSQRPELLKIGYFGPG 182
Query: 168 RIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVR-VPMSKYMGGIQKAILEVMDACLK 226
MK + L L+PR V + L V V R V + +Q+ I+ +++
Sbjct: 183 IAMKHIGTTILCLYPRSHEAVEKSLVEHGSVDVTERAVKPTDNFTTVQRYIILLIEKGFN 242
Query: 227 EMRKTNKVDVEDLTVENGLFKS---FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLD 283
E++K N D+++ + LF S F + W+ + + + D+ T R+LL
Sbjct: 243 ELKKINS--DADISLTDTLFSSVRNFQNCIEEATQTKWNQMSLHLRNISRDIVTFRRLLS 300
Query: 284 YLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSK 343
L R DAVT+ Y + LR ++S W ++ ++ RV++ G+ G +
Sbjct: 301 LLHRLDAVTFFYYTEVLRCTQSLDFSWYLTVEFEAMYKASRDRVFQIISRKGIS-KGTTN 359
Query: 344 SV 345
SV
Sbjct: 360 SV 361
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAE---NPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAF 698
+P I++ P+++ +R+IE + A N S LKV L Y+ S ++F ++ E G++
Sbjct: 598 QPHHIILLDPEVATLREIEFFNASGRLNKSSSLKVTILTYQGSFNHERFINTMKVEQGSW 657
Query: 699 ESLIRQKSFMMIPIDQV 715
E LIR K +++P++++
Sbjct: 658 EILIRHKRTLVVPLNEI 674
>gi|396081877|gb|AFN83491.1| Rad1-like DNA repair protein [Encephalitozoon romaleae SJ-2008]
Length = 768
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 187/399 (46%), Gaps = 34/399 (8%)
Query: 1 MVLEFHQHIIAELLQEPNG--GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLK 58
M+LE+ + E L+E G L+++ GL++ +I + + +LL++ S +
Sbjct: 36 MLLEYEE----EALRECRGQSCLLVMGGGLNIQGIIRETIKQYLCRNSLVLLVNFSNEDE 91
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S + L +P L L R Y G +FF + R+ + D++ + +
Sbjct: 92 SLL---LKMESPFLQD--VRSLHRTKRRERYLRGGVFFASNRVFLADMIDGTIDVEKVDS 146
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+++ N ++TE S+E FI + +S N+ I+ FS+ P + GF+ +R MKSL + K
Sbjct: 147 ILVNNVESITETSSEAFIAHLFRSRNKLGVIKGFSESPVPLSLGFSPLDRKMKSLKLVKA 206
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
+PRF V + L+R+ VV+++ MS+ +Q +LE++ L+ + K + E+
Sbjct: 207 IFFPRFHFLVEKSLKRDTD-VVEIKFKMSERRSQLQVVLLEIISNLLRMVFKGSV--REE 263
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ E +F S +I ++ + +++ DL +R L+ L D T+ +Y
Sbjct: 264 VDAETIIFGSVRKIFKQ--------MNITNNRIMEDLYDIRGLVFLLFSCDPGTFYEYTK 315
Query: 299 TL---RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKV 355
+ ++ S WI S+ + D A++ + + +E +++ + +RK KK
Sbjct: 316 EIVKKQMELGKDSTWINLPISHVLVDEAREYFW-----EAIE---KTEYLVEGERKEKKA 367
Query: 356 DNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEI 394
++DE + L PK K L E+LEE+
Sbjct: 368 RADKDELEYLAGLCN-ARLRAFYALNPKIKKLVEILEEV 405
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
VR+IE Y + +KV+FL + +S E Q++ + IRRE +FE LI +K+ + + +D V
Sbjct: 473 VRKIERYGTMH---SVKVFFLMHSESLEEQRYLSEIRREKASFEKLIEEKTRLPLRLDDV 529
>gi|145537335|ref|XP_001454384.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422139|emb|CAK86987.1| unnamed protein product [Paramecium tetraurelia]
Length = 873
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 31/337 (9%)
Query: 17 PNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN-----LKSQIIHYLAPNA-- 69
PNGG +IL+SGLS+ L + L ++++L + N + +Q+ ++ N
Sbjct: 21 PNGGFMILTSGLSIANLTSLFLTYFLEKSKSVIILLNYSNYEIDFIDTQLNFFVTQNQLN 80
Query: 70 ----PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTH 125
L + P+ R Y G IF +TP+ILI DLL L + LII TH
Sbjct: 81 NNKEYALSVVVLTKQPSEKRAAFYKQGGIFSITPQILIQDLLINTLSPFIVTHLIIQQTH 140
Query: 126 AL-TENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
+ ++ E++I IK + E ++ AF+++P A++ T I+K+ ++ + WP
Sbjct: 141 QIKSQYDYESWITNFIKIVKPELFLLAFTNQP-AILQLQQNTPTILKNFYLNNIIPWPMN 199
Query: 185 QVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVD--VEDLTVE 242
+ + L+ P ++++ +SK + IQ ++ ++ C++ + D+ V+
Sbjct: 200 RAEIVNSLKSHPFKWSEIKINLSKTIKDIQDIVISLIKQCIQAVNGQCGTSYLTSDMVVQ 259
Query: 243 NGLFKSFDEILRRQ---LDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
++ +++RQ +D I +Q+ D+ LR+LL L+ A + L
Sbjct: 260 QN-WRKLKALIQRQSFKIDLI-------QQQIFLDIFQLRRLLFALINQSAYQFYFTLTQ 311
Query: 300 LRVSESFRSVWIFAESS-----YKIFDYAKKRVYRFT 331
+ S+W ++ ++ A++RVY F
Sbjct: 312 IINDAPIDSIWYISQPEIEGLVLRLQKLAQERVYSFV 348
>gi|303390268|ref|XP_003073365.1| Rad1-like DNA repair protein [Encephalitozoon intestinalis ATCC
50506]
gi|303302511|gb|ADM12005.1| Rad1-like DNA repair protein [Encephalitozoon intestinalis ATCC
50506]
Length = 735
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 162/331 (48%), Gaps = 25/331 (7%)
Query: 1 MVLEFHQHIIAELLQEPNG--GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLK 58
M+LE+ + E LQ +G L+++ GL++ +I V+ + +LL++ + +
Sbjct: 8 MLLEYEK----EALQTCDGQNSLLVMGGGLNIQGIILEVVKKYLEKTYLVLLVNFNTEDE 63
Query: 59 SQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
S + L +P L T LP R Y +G +F + R+ + D++ + +
Sbjct: 64 SML---LRMESPFLHDVRT--LPRTRRREKYLNGGVFIASSRVFLADMIDGTVDVEKIDC 118
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+++ + +TE S E+FI + +S N+ +I FS+ P + GF+ R MKSL + K+
Sbjct: 119 ILVNHAETVTETSLESFISHVFRSKNKTGFINGFSESPVPLSLGFSPLARKMKSLKMNKV 178
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
+PRF +V + L+ + VV+++ MS+ +Q +LE+++ LK + D E+
Sbjct: 179 VFFPRFHSSVEKSLKGDAD-VVEIKFKMSESRSHLQVILLEIINGLLKMAFRGP--DREE 235
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
+ E +F S + ++ ++L + ++ DL +R L+ L D ++ Y+
Sbjct: 236 VDAEAIIFGSIRKTFKQ-----MNVLNSR---IMEDLYDIRGLIFLLFSCDPGSFYGYVK 287
Query: 299 TL---RVSESFRSVWIFAESSYKIFDYAKKR 326
+ +V S WI S+ + D A+++
Sbjct: 288 EIVKKQVELGKDSTWINLPISHVLIDGAREQ 318
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPID 713
VR+IE Y+ +P +KV+FL + S E Q++ IRRE +FE LI ++S + + +D
Sbjct: 441 VRKIERYRVMHP---VKVFFLMHSSSLEEQRYLNEIRREKTSFEKLIEERSRLPLQLD 495
>gi|428671940|gb|EKX72855.1| conserved hypothetical protein [Babesia equi]
Length = 1091
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
Query: 82 ANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIK 141
+ R LY +G IF + RIL+ D+LT ++ + G+II+N H + ++ F+ R+++
Sbjct: 218 STFRERLYLNGGIFCLPSRILLADILTTKIIPELIGGIIIMNAHRIIDDYNIPFVIRLVR 277
Query: 142 SLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE--REPPVV 199
S NR A+I+A SD +++ K ++KSLF R L+PR+ + L P
Sbjct: 278 SRNRIAFIKALSDSHSSLRPP-GKITFVLKSLFTRDFFLFPRYSTIFEDVLNCSHVQPET 336
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLF-KSFDEILRRQL- 257
+ + +SK I AI+ ++ L ++++ N +DL + ++ +S ++LR
Sbjct: 337 FEAVLELSKAAKDIYFAIVRLIQRLLDDLQR-NDSTFQDLDMNRIIYSRSTSKLLRSIFE 395
Query: 258 DPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSY 317
+ + + K+ + + L+ LLD L+ D ++ Y + LR S+ + W+F
Sbjct: 396 NKVLTVNSNYIKRDIESIVNLKYLLDKLLHMDPASFHAYAEQLRSSDP-EAPWLFTPDGN 454
Query: 318 KIFDYAKKRVYRFTRSDGVE 337
I+ + R+ FT S E
Sbjct: 455 LIYKLSTARL--FTLSSDTE 472
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIK----LKVYFLFYEDSTEVQKFKAGIRRENG 696
+KP +I+V+ P+ R IE Y A N K L+V+ L Y+D E +FK ++ E
Sbjct: 756 IKPTLIIVFTPNTHIFRVIEQYCALNFYAKKRNYLRVHVLSYKDCLETHRFKKDLKTELE 815
Query: 697 AFESLIRQKSFMMIPIDQ 714
++ L ++K ++ +D+
Sbjct: 816 SWGQLQKEKETSVVQLDE 833
>gi|449328745|gb|AGE95021.1| XPF/ERCC4/rad1 family protein [Encephalitozoon cuniculi]
Length = 768
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 184/400 (46%), Gaps = 50/400 (12%)
Query: 12 ELLQEPNG--GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNA 69
E+L+E +G L++++ GL++ ++ + + LL++ S +S + L +
Sbjct: 43 EVLRECDGQSCLLVMAGGLNIQGIMVEMARQYLNKNSLALLVNFSGEDESLL---LRTES 99
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
P L +I A L R Y G + + R+ + D++ + + +++ N +TE
Sbjct: 100 PFL-HDIRA-LQRPKRREKYLCGGVCIASNRVFLADMIDGTIDAEKIDCILVNNVETITE 157
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
S+E+FI + +S NR IR FS+ P + GF+ +R M+SL + K +PRF V
Sbjct: 158 TSSESFIIHVFRSRNRTGLIRGFSESPVPLSLGFSPLDRKMRSLKVSKAVFFPRFHSLVE 217
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKS 248
E L + VV+++ MS+ +Q +LE++ + L+ + R + + +V+ T+ +F S
Sbjct: 218 ESLNGDMD-VVEIKFRMSERKSQLQVVLLEIIGSLLRMVFRGSGREEVDPETI---IFGS 273
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL---RVSES 305
+I ++ + +++ DL +R L+ L D ++ ++ + +V
Sbjct: 274 IHKIFKQ--------MSVSNNRIMEDLYDMRGLVFLLFSSDPGSFYGHVKEVVRKQVELE 325
Query: 306 FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGT 365
S WI S+ + D A+++ + VE K K +D +D G
Sbjct: 326 KDSTWINLPVSHVLVDKAQEQF-----EEAVE-------------KTKGLDGEDDCGGKE 367
Query: 366 SSTSTKVVLEEVLEEA---------PKWKVLREVLEEIEE 396
+ + V L A PK K L EVL+E++E
Sbjct: 368 GERAEETVFLPGLSNARLRAFYALNPKIKKLVEVLQEVKE 407
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
VR+IE Y + +KV+FL + S E Q++ IRRE +FE LI ++S + + +D V
Sbjct: 473 VRKIERYGVAH---SVKVFFLMHTGSLEEQRYLNEIRREKASFEKLIEERSRLPLRLDDV 529
>gi|19173402|ref|NP_597205.1| BELONGS TO THE XPF/ERCC4/RAD1 FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 768
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 184/400 (46%), Gaps = 50/400 (12%)
Query: 12 ELLQEPNG--GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNA 69
E+L+E +G L++++ GL++ ++ + + LL++ S +S + L +
Sbjct: 43 EVLRECDGQSCLLVMAGGLNIQGIMVEMARQYLNKNSLALLVNFSGEDESLL---LRTES 99
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
P L +I A L R Y G + + R+ + D++ + + +++ N +TE
Sbjct: 100 PFL-HDIRA-LQRPKRREKYLCGGVCIASNRVFLADMIDGTIDAEKIDCILVNNVETITE 157
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
S+E+FI + +S NR IR FS+ P + GF+ +R M+SL + K +PRF V
Sbjct: 158 TSSESFIIHVFRSRNRTGLIRGFSESPVPLSLGFSPLDRKMRSLKVSKAVFFPRFHSLVE 217
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKS 248
E L + VV+++ MS+ +Q +LE++ + L+ + R + + +V+ T+ +F S
Sbjct: 218 ESLNGDMD-VVEIKFRMSERKSQLQVVLLEIIGSLLRMVFRGSGREEVDPETI---IFGS 273
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL---RVSES 305
+I ++ + +++ DL +R L+ L D ++ ++ + +V
Sbjct: 274 IHKIFKQ--------MSVSNSRIMEDLYDMRGLVFLLFSSDPGSFYGHVKEVVRKQVELE 325
Query: 306 FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGT 365
S WI S+ + D A+++ + VE K K +D +D G
Sbjct: 326 KDSTWINLPVSHVLVDKAQEQF-----EEAVE-------------KTKGLDGEDDCGGKE 367
Query: 366 SSTSTKVVLEEVLEEA---------PKWKVLREVLEEIEE 396
+ + V L A PK K L EVL+E++E
Sbjct: 368 GERAEETVFLPGLSNARLRAFYALNPKIKKLVEVLQEVKE 407
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
VR+IE Y + +KV+FL + S E Q++ IRRE +FE LI ++S + + +D V
Sbjct: 473 VRKIERYGVAH---SVKVFFLMHTGSLEEQRYLNEIRREKASFEKLIEERSRLPLRLDDV 529
>gi|392512811|emb|CAD26381.2| BELONGS TO THE XPF/ERCC4/RAD1 FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 733
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 184/400 (46%), Gaps = 50/400 (12%)
Query: 12 ELLQEPNG--GLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNA 69
E+L+E +G L++++ GL++ ++ + + LL++ S +S + L +
Sbjct: 8 EVLRECDGQSCLLVMAGGLNIQGIMVEMARQYLNKNSLALLVNFSGEDESLL---LRTES 64
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
P L +I A L R Y G + + R+ + D++ + + +++ N +TE
Sbjct: 65 PFL-HDIRA-LQRPKRREKYLCGGVCIASNRVFLADMIDGTIDAEKIDCILVNNVETITE 122
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
S+E+FI + +S NR IR FS+ P + GF+ +R M+SL + K +PRF V
Sbjct: 123 TSSESFIIHVFRSRNRTGLIRGFSESPVPLSLGFSPLDRKMRSLKVSKAVFFPRFHSLVE 182
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM-RKTNKVDVEDLTVENGLFKS 248
E L + VV+++ MS+ +Q +LE++ + L+ + R + + +V+ T+ +F S
Sbjct: 183 ESLNGDMD-VVEIKFRMSERKSQLQVVLLEIIGSLLRMVFRGSGREEVDPETI---IFGS 238
Query: 249 FDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL---RVSES 305
+I ++ + +++ DL +R L+ L D ++ ++ + +V
Sbjct: 239 IHKIFKQ--------MSVSNSRIMEDLYDMRGLVFLLFSSDPGSFYGHVKEVVRKQVELE 290
Query: 306 FRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGT 365
S WI S+ + D A+++ + VE K K +D +D G
Sbjct: 291 KDSTWINLPVSHVLVDKAQEQF-----EEAVE-------------KTKGLDGEDDCGGKE 332
Query: 366 SSTSTKVVLEEVLEEA---------PKWKVLREVLEEIEE 396
+ + V L A PK K L EVL+E++E
Sbjct: 333 GERAEETVFLPGLSNARLRAFYALNPKIKKLVEVLQEVKE 372
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQV 715
VR+IE Y + +KV+FL + S E Q++ IRRE +FE LI ++S + + +D V
Sbjct: 438 VRKIERYGVAH---SVKVFFLMHTGSLEEQRYLNEIRREKASFEKLIEERSRLPLRLDDV 494
>gi|402470703|gb|EJW04814.1| hypothetical protein EDEG_00984 [Edhazardia aedis USNM 41457]
Length = 961
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPN---- 56
M+LEF ++I+ E N L++L GL K+I L ++ Q +L L+ S N
Sbjct: 1 MLLEFEKNILEETTCCSN--LLVLGKGLGKEKIIYHQLSFYANQQCLVLCLNFSENEIMF 58
Query: 57 ----LKSQIIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLP 112
++ IH+ PN R Y G IF + + + DL+ +P
Sbjct: 59 LKNKFNTKYIHFDVPNN------------IEKRREFYKKGGIFVASENVFVCDLVNNVIP 106
Query: 113 TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKS 172
+++ + I N L ++ST FI I + + IR ++D P F + M
Sbjct: 107 VYSISAVFISNAENLKKDSTFEFIIDYIVDHSEDTVIRGYTDNPI-----FLDLDLAMSI 161
Query: 173 LFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
L + K +PRF V + L + + + + + IQ +LE + L E++ +
Sbjct: 162 LQVGKAFFYPRFSDVVVKSLPNDTKFF-EKSLKLDSELEEIQILLLETIKGILNEIKAID 220
Query: 233 KVDVEDLTVENGLFKSFDEILRRQLDPIWHILGK---------KTKQLVSDLKTLRKLLD 283
K + E L ++ D+ +L I IL K ++L+SD+K+ R L++
Sbjct: 221 KFNYE-------LRENLDDFDATKLPVIMRILRKILDNQGYKSNVRRLISDVKSFRVLMN 273
Query: 284 YLVRYDAVTYLKYLDTL---RVSESFRSVWIFAESSYKIFDYA 323
L V L+++ ++S +S WI ES + + + A
Sbjct: 274 LLFSVGFVCCYNVLESMWEEQISMKEKSTWINTESGFLLIEKA 316
>gi|209945562|gb|ACI97012.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + KSF +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKSFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945580|gb|ACI97021.1| meiotic 9 [Drosophila melanogaster]
Length = 471
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945578|gb|ACI97020.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945538|gb|ACI97000.1| meiotic 9 [Drosophila simulans]
Length = 472
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 54/235 (22%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
++++ E+ VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EVPGDMRRSRRSEQ---------QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945598|gb|ACI97030.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 56/236 (23%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
EI + + S ++ VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945546|gb|ACI97004.1| meiotic 9 [Drosophila simulans]
Length = 471
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 54/235 (22%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 2 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 61
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 62 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 116
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 117 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 139
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
++++ E+ VL+ C+D +C QL+ + G + + ++
Sbjct: 140 EVPGDMRRSRRSEQ---------QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 185
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 324 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 383
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 384 EKAAFEFIIDTKSKMVIP 401
>gi|209945542|gb|ACI97002.1| meiotic 9 [Drosophila simulans]
Length = 472
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 54/235 (22%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
++++ E+ VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EVPGDMRRSRRSEQ---------QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945548|gb|ACI97005.1| meiotic 9 [Drosophila melanogaster]
gi|209945554|gb|ACI97008.1| meiotic 9 [Drosophila melanogaster]
gi|209945558|gb|ACI97010.1| meiotic 9 [Drosophila melanogaster]
gi|209945564|gb|ACI97013.1| meiotic 9 [Drosophila melanogaster]
gi|209945566|gb|ACI97014.1| meiotic 9 [Drosophila melanogaster]
gi|209945576|gb|ACI97019.1| meiotic 9 [Drosophila melanogaster]
gi|209945584|gb|ACI97023.1| meiotic 9 [Drosophila melanogaster]
gi|209945592|gb|ACI97027.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945596|gb|ACI97029.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVY + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYXXIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945568|gb|ACI97015.1| meiotic 9 [Drosophila melanogaster]
gi|209945570|gb|ACI97016.1| meiotic 9 [Drosophila melanogaster]
gi|209945572|gb|ACI97017.1| meiotic 9 [Drosophila melanogaster]
gi|209945574|gb|ACI97018.1| meiotic 9 [Drosophila melanogaster]
gi|209945582|gb|ACI97022.1| meiotic 9 [Drosophila melanogaster]
gi|209945594|gb|ACI97028.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945590|gb|ACI97026.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 54/263 (20%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
++++ E+ VL+ C D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRXXEQ---------QPKVLILCXDARTCHQLKQYLTQGGPRFLLQQALQHE 191
Query: 454 LSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 192 VPVGKLSDNYAKESQTRSAPPKN 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945536|gb|ACI96999.1| meiotic 9 [Drosophila simulans]
gi|209945540|gb|ACI97001.1| meiotic 9 [Drosophila simulans]
Length = 472
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 54/235 (22%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
++++ E+ VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EVPGDMRRSRRSEQ---------QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945544|gb|ACI97003.1| meiotic 9 [Drosophila simulans]
Length = 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 54/235 (22%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
++++ E+ VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EVPGDMRRSRRSEQ---------QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945552|gb|ACI97007.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 56/236 (23%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
EI + + S ++ VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|156083873|ref|XP_001609420.1| DNA repair endonuclease [Babesia bovis T2Bo]
gi|154796671|gb|EDO05852.1| DNA repair endonuclease, putative [Babesia bovis]
Length = 1168
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 142/289 (49%), Gaps = 28/289 (9%)
Query: 60 QIIHYLAPNAPLLPSEITADLP----------ANHRHTLYSSGQIFFVTPRILIVDLLTQ 109
QII+ L + +P+ + LP A+ R +Y G I+ V RIL+VDLLT
Sbjct: 182 QIINQLCYSTADVPNNRSVKLPMPVFIEGSVLAHDREKMYIEGGIYSVPSRILLVDLLTG 241
Query: 110 RLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERI 169
+L ++G++I++ H + + F+ ++++S N+ A+I+A +D +M + +
Sbjct: 242 KLTPEIVSGIVIVHAHRMAHDYNIPFLIKLLRSRNKLAFIKAITDNVISMREE-GRVNFV 300
Query: 170 MKSLFIRKLHLWPRFQVNVSEELEREP---PVVVDVRVPMSKYMGGIQKAILEVMDACLK 226
+KS+F ++PR + L +P P ++ + +S I I++++ +
Sbjct: 301 LKSMFTSDCFIYPRCSSCIDSVLN-DPEVQPETYEINLQLSDNAKQIHNTIVQLLQRLMT 359
Query: 227 EMRKTNKVDVEDLTVENGLFKS-FDEILRRQLDPI------WHILGKKTKQLVSDLKTLR 279
++++ +++ L + ++ S D + L +HI ++ ++ + L+
Sbjct: 360 DLQRQLGDELQHLDMNAIMYTSNVDRLFSNALQKAYVSANSYHI-----RRSMASISNLK 414
Query: 280 KLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVY 328
LL+ L DA+++L + ++++ +ES S W++ I+ A RVY
Sbjct: 415 MLLNQLYNMDAISFLAFGESMKEAES-DSHWLWTSYGNIIYKLATARVY 462
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIK----LKVYFLFYEDSTEVQKFKAGIRRENG 696
KP VI VY P++ R IE Y A + + LKVY + Y D E KF ++ E
Sbjct: 797 FKPTVIAVYRPNVKVFRVIEQYCALHSASGGKRFLKVYIMSYVDCLESHKFARDLKHELE 856
Query: 697 AFESLIRQKSFMMIPIDQV 715
+ +L +Q + I D+
Sbjct: 857 CWRTLQQQLKSLQITYDET 875
>gi|209945588|gb|ACI97025.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 54/263 (20%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
++++ E+ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRPEQ---------QPKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQHE 191
Query: 454 LSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 192 VPVGKLSDNYAKESQTRSAPPKN 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|85000729|ref|XP_955083.1| DNA repair (RAD6) endonuclease [Theileria annulata strain Ankara]
gi|65303229|emb|CAI75607.1| DNA repair (RAD6) endonuclease, putative [Theileria annulata]
Length = 1422
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 143/279 (51%), Gaps = 25/279 (8%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I + ++ R LY +G F + R+L+ D+LT ++ + G++I+N H + E+ F
Sbjct: 300 IDGSVISSSRQQLYVNGGYFCINTRVLLNDILTSKILPEIIGGIVIMNAHQIAEDCNIPF 359
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERI---MKSLFIRKLHLWPRFQVNVSEEL 192
+ R+++ N+ A+++A S+ F K + +K++F + ++L+PR + L
Sbjct: 360 VIRLLRMRNKVAFVKAVSNNV-----HFFKGNNLSYCLKNIFSKNVYLFPRCHHAIEAVL 414
Query: 193 E--REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFD 250
+ P+ +V P+S+ +IL+++ ++ M++ K D++ + K
Sbjct: 415 NDTQVQPLTFEVSFPLSETASEAYNSILKIIWTIVQSMKRL-KYDIDMNKIVYTTNKLLI 473
Query: 251 EILRRQLDP--IWHIL---GKKTKQLVSD-----LKTLRKLLDYLVRYDAVTYLKYLDTL 300
+LR+Q ++ KTK SD L R+LLD+L+ D +T+L+ LD +
Sbjct: 474 RLLRKQSKSTKVYQSTAPQANKTKFNSSDFYIDTLLKFRRLLDHLLFTDPITFLEELDNI 533
Query: 301 RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELN 339
++E+ S W+ + K+F + +R+++ +D +ELN
Sbjct: 534 -ITEN--SNWVCTPNGIKLFKKSNERLFKI-ENDKIELN 568
>gi|209945534|gb|ACI96998.1| meiotic 9 [Drosophila yakuba]
Length = 472
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 56/236 (23%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRV------ 116
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
+NGQ E E PKW+ L ++L +
Sbjct: 117 ----VNGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
EI + Q S R E VL+ C+D +C QL+ + G + + ++
Sbjct: 141 EIPGD--MQRSRRSE--------QXPKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 186
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTVIRQLEVFEARRRLPPAERMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFELIIDTKSKMVIP 402
>gi|68069893|ref|XP_676858.1| DNA repair endonuclease [Plasmodium berghei strain ANKA]
gi|56496742|emb|CAH98150.1| DNA repair endonuclease, putative [Plasmodium berghei]
Length = 1072
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 139/289 (48%), Gaps = 10/289 (3%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
L +E + AN R +Y ++F++ IL++DLLT ++ + G+ I +H L +
Sbjct: 192 LKTEYIRNQKANERIEMYIKRGVYFISSNILLIDLLTYKIIPEIIDGIFICRSHKLMYSM 251
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI + + N+ +I+ ++ + + + I K L+I+K++ +PRF N+
Sbjct: 252 KENFIIDLYRKRNKFGFIKGINNNKKLVKN--QQISNISKKLYIKKIYCYPRFHKNIHIS 309
Query: 192 LERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSF 249
L + P + ++ V + + ++ +IL ++ E++K +K ED + + L+
Sbjct: 310 LNNKLIQPNIYEINVDLPVVLKKMEDSILNLIHYINIEIKKIHK--FEDFDINSLLYSDS 367
Query: 250 DEILRRQLDPIWH-ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
E ++ I + L TK+L+ ++ L LL L YD + + Y++ ++ ++ S
Sbjct: 368 PE--NYTMNYIKNKNLTYNTKKLLKEIIILVNLLYNLYIYDDIIFYNYINNIKEADK-ES 424
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
+W++ + ++F A +R F + + + + K + + N
Sbjct: 425 IWMYCNEANELFYLANERKNNFLNKIDISIESNTLHTSPNKNTMHTIIN 473
>gi|209945586|gb|ACI97024.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ + E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMNFLVLEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|209945560|gb|ACI97011.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M E+++ N+ VD+E +TVEN + K+F +IL+ QLD IWH L +TK +V+DL
Sbjct: 3 ILEIMXXXXXEIKRINRTVDMEAVTVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|82540489|ref|XP_724558.1| DNA repair endonuclease subunit [Plasmodium yoelii yoelii 17XNL]
gi|23479241|gb|EAA16123.1| DNA repair endonuclease, subunit [Plasmodium yoelii yoelii]
Length = 1484
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 141/277 (50%), Gaps = 12/277 (4%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
L +E + AN R +Y ++F++ IL++DLLT ++ + G+ I +H L +
Sbjct: 179 LKTEYIRNQKANERIEMYIKRGVYFISSNILLIDLLTYKIIPEIIDGIFICRSHKLMYSM 238
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI + + N+ +I+ ++ +V+ + I K L+++K++ +PRF N+
Sbjct: 239 KENFIIDLYRKRNKFGFIKGINNNK-KLVNN-QQISNISKKLYMKKIYCYPRFHKNIHIS 296
Query: 192 LERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSF 249
L + P + ++ V + + ++ +IL ++ E++K +K ED + L+
Sbjct: 297 LNNKLIQPNIYEINVDLPIVLKKMEDSILNLIHYINIEIKKIHK--FEDFDINLLLYSDN 354
Query: 250 DEILRRQLDPIWH-ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
E ++ I + L TK+L+ ++ L LL L YD + + Y++ ++ ++ S
Sbjct: 355 PE--NYTMNYIKNKNLTYNTKKLLKEIIILVNLLYNLYIYDDIIFYNYINNIKEADK-ES 411
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSV 345
+W++ + ++F A +R F + +++N +SK++
Sbjct: 412 IWMYCNEANELFYLANERKNIFL--NKIDINIESKTL 446
>gi|260789317|ref|XP_002589693.1| hypothetical protein BRAFLDRAFT_100820 [Branchiostoma floridae]
gi|229274875|gb|EEN45704.1| hypothetical protein BRAFLDRAFT_100820 [Branchiostoma floridae]
Length = 515
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 641 LKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFES 700
+KP +V+Y P+M FVRQ+EVYKA P + L+VYFL Y STE Q++ +RRE AFE
Sbjct: 199 VKPSYVVLYDPEMEFVRQLEVYKAGRPGVPLRVYFLIYTTSTEEQRYLTSLRREKDAFEH 258
Query: 701 LIRQKSFMMIP 711
LI++K+ +++P
Sbjct: 259 LIKEKASLVLP 269
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 364 GTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVA 423
G +++ V + LEE PKW L +VL+E+ EE K LD G VL+A
Sbjct: 24 GKDTSAQPVTPDLRLEENPKWTALWDVLQEVREENTK---------LD----QQGSVLIA 70
Query: 424 CKDECSCMQLEDCIRNGSEKVMREEWEKYL 453
D+ +C Q+++ + +GS ++ + K L
Sbjct: 71 AYDDRTCSQIKEYLCDGSRSLLTRLYNKTL 100
>gi|401402883|ref|XP_003881358.1| protein C47D12.8, partially confirmed by transcript evidence,
related [Neospora caninum Liverpool]
gi|325115770|emb|CBZ51325.1| protein C47D12.8, partially confirmed by transcript evidence,
related [Neospora caninum Liverpool]
Length = 1844
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 10/166 (6%)
Query: 84 HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL 143
R LY+ G F V+ R+L+ DLL+ +LP + +I+++ + + E FI R+ +
Sbjct: 305 QREKLYAKGGCFSVSSRVLVGDLLSGKLPPEVIDCIIVMHAETVCKGFNEAFIVRLYRQR 364
Query: 144 NREAYIRAFSDKPTAM----------VSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
NR ++A D P+A VS F ER MK L+I+K+HL+PR V LE
Sbjct: 365 NRLGGLKAICDNPSAFFSSFLSRKHNVSIFGLLERTMKQLWIQKVHLFPRDSPVVQRSLE 424
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDL 239
P ++V + S IQ+A++ ++ + L +++ +++E++
Sbjct: 425 AAEPESLEVVLQPSTSTLEIQRAVILMLQSGLDFLKRIRLLNLENI 470
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESF 306
++F ++ + +WH L K++Q V+DL LR LL L R DAV + ++TL+ S+
Sbjct: 542 EAFAASVKESAEAVWHKLDAKSRQFVADLGVLRNLLWRLYRLDAVAFFSLVETLKASKVL 601
Query: 307 RSVWIFAESSYKIFDYAKKRVYRFTRSDGVEL 338
W++ + + A+ RV+ R EL
Sbjct: 602 DPGWMYTTEMHVLLHRAQNRVFCLQRIPHSEL 633
>gi|156101553|ref|XP_001616470.1| DNA repair endonuclease [Plasmodium vivax Sal-1]
gi|148805344|gb|EDL46743.1| DNA repair endonuclease, putative [Plasmodium vivax]
Length = 1630
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 130/271 (47%), Gaps = 12/271 (4%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
L +E + +N R LY ++F++ +L++D+LT ++ + G+ + H L N
Sbjct: 286 LKTEYIRNQKSNERIELYIKRGVYFISSNVLLIDMLTFKIIPEIIDGIFLCKNHKLIYNM 345
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI + + N+ +I+ S+ + S + + L I+K++ +PRF NV
Sbjct: 346 KEVFITELYRKRNKFGFIKGISNNRRLVNS--QHIINLSQKLSIKKVYCYPRFHKNVHLS 403
Query: 192 LERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSF 249
L P + ++ + + + +++ +L ++ E++K N D+ N L S
Sbjct: 404 LNNNFLQPTIYEINMQLPSDVNTMEENLLNLIHYLNLEIKKYNNFTDFDI---NALIYS- 459
Query: 250 DEILRRQLDPI-WHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
D ++ I L TK+L+ ++ L +L+ L YD V + YL+ ++ ++ S
Sbjct: 460 DSAENYTMNYIKSKNLTYNTKKLLKEIIILAHVLNNLYVYDQVVFDNYLNNIKEADK-ES 518
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVELN 339
+W++ + +F +++R F + G+ +N
Sbjct: 519 IWLYCNEANDVFFLSRERKLNFLK--GINMN 547
>gi|389584364|dbj|GAB67096.1| DNA repair endonuclease [Plasmodium cynomolgi strain B]
Length = 1577
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
L +E + +N R LY ++F++ IL++D+LT ++ + G+ + H L N
Sbjct: 148 LKTEYIRNQKSNERIELYIKRGVYFISSNILLIDMLTFKIIPEIIDGIFLCKNHKLVYNM 207
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI + + N+ +I+ S+ + S + + L I+K++ +PRF NV
Sbjct: 208 KEVFITELYRKRNKYGFIKGISNNKRLVNS--QHIVNLSQKLSIKKVYCYPRFHKNVHIS 265
Query: 192 LERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSF 249
L P + ++ + + + +++ +L ++ E++K + D+ N L S
Sbjct: 266 LNNNFLQPTIYEINMELPSDINTMEENLLNLIHYLNLEIKKYHTFTDFDI---NALIYS- 321
Query: 250 DEILRRQLDPI-WHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
D ++ I L TK+L+ ++ L ++L+ L YD V + YL+ ++ ++ S
Sbjct: 322 DSAENYTMNYIKSKNLTYNTKKLLKEIIVLTQVLNNLYVYDHVVFDNYLNNIKEADK-ES 380
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVEL 338
+W++ + IF +++R F ++ + L
Sbjct: 381 IWLYCNEANDIFFLSRERKINFLKALNMNL 410
>gi|124514084|ref|XP_001350398.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
gi|23615815|emb|CAD52807.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
Length = 1700
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 136/304 (44%), Gaps = 38/304 (12%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
+E D ++ R +Y ++F++ +L++DLLT ++ + G+ I H L N
Sbjct: 264 FKTEYIRDQKSHERIEMYIKRGVYFISSNVLLIDLLTFKIIPEIIDGIFICKNHRLIYNM 323
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI + + N+ +I+ S+ + + + LF+++++ +PRF ++
Sbjct: 324 KEIFIIELYRKRNKFGFIKGISNNKKLI--NHQHIVNLAQKLFMKRIYCYPRFHKHIHIS 381
Query: 192 LERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSF 249
L + P + ++ + + + I++ IL ++ E++K N F F
Sbjct: 382 LNNKFLQPHIYEINLDIPNVLLKIEENILNILHYLNLEIKK------------NYNFHDF 429
Query: 250 DEILRRQLDPIWH---------------ILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294
D L+P+ + L TK+L+ ++ TL +L L YD++ +
Sbjct: 430 D------LNPLLYSENAEAYVLNYIKTKTLNYNTKKLLKEIITLVNMLCNLFIYDSLIFY 483
Query: 295 KYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKK 354
YL+ L+ ++ +W++ + +IF +++R +F + +N + T + +
Sbjct: 484 NYLNNLKEADK-ECIWLYCNEANEIFYLSRERNNQFLNQMDILVNQNDINNTQNIINVIQ 542
Query: 355 VDNN 358
DNN
Sbjct: 543 YDNN 546
>gi|67971340|dbj|BAE02012.1| unnamed protein product [Macaca fascicularis]
Length = 582
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E
Sbjct: 235 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKE 294
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 295 AFEKLIREKASMVVP 309
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
E VLE PKW L EVL+EIE A ++E L G G VL+ D+ +C QL
Sbjct: 38 ELVLESNPKWGALTEVLKEIE------AENKESEALGGP----GQVLICASDDRTCSQLR 87
Query: 435 DCIRNGSE----KVMREEWEK 451
D I G+E ++ R+ +EK
Sbjct: 88 DYITLGAEAFLLRLYRKTFEK 108
>gi|221057382|ref|XP_002261199.1| DNA repair endonuclease [Plasmodium knowlesi strain H]
gi|194247204|emb|CAQ40604.1| DNA repair endonuclease, putative [Plasmodium knowlesi strain H]
Length = 1653
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 128/270 (47%), Gaps = 10/270 (3%)
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
L +E ++ R LY ++F++ IL++D+LT ++ + G+ + H L N
Sbjct: 226 LKTEYIRSQKSSERIDLYIKRGVYFISSNILLIDMLTFKIIPEIIDGIFLCKNHKLIYNM 285
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEE 191
E FI + + N+ +I+ S + S +++ L I+K++ +PRF NV
Sbjct: 286 KEVFITELYRKRNKYGFIKGISSNKRLVNS--QHIVNLIQRLSIKKVYCYPRFHKNVHIS 343
Query: 192 LERE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSF 249
L P + ++ + + + +++ +L ++ E++K + D+ N L S
Sbjct: 344 LNNNFLQPTIYEINMDVPSDVNTMEENLLNLIHYLNLEIKKYHTFTDFDI---NALIYS- 399
Query: 250 DEILRRQLDPI-WHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRS 308
D ++ I L TK+L+ ++ L +L+ L YD V + YL+ ++ ++ S
Sbjct: 400 DNAENYTMNYIKTKNLTYNTKKLLKEIIVLAHVLNNLYVYDQVVFDNYLNNIKEADK-ES 458
Query: 309 VWIFAESSYKIFDYAKKRVYRFTRSDGVEL 338
+W++ + +F +++R F +S + L
Sbjct: 459 IWLYCNEANDVFFLSRERKINFLKSINLNL 488
>gi|194377974|dbj|BAG63350.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL Y STE Q++ +R+E
Sbjct: 119 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKE 178
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 179 AFEKLIREKASMVVP 193
>gi|355686463|gb|AER98066.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Mustela putorius furo]
Length = 298
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 567 DKPEISGSGNEG-PADEIHSGVVGYSGGMLETAFVE-KEVQWKRSLKTDTAESKDSKPVP 624
D+PE G EG P D +G E++ E K ++ +L +D A P+
Sbjct: 158 DEPEEEGDVKEGGPRD---------TGSSPESSLEEIKHEEFDLNLSSDAAYGLLKDPLT 208
Query: 625 PVHF-------YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLF 677
+H YAL +L ++P +V+Y +++FVRQ+E+Y+A P L+VYFL
Sbjct: 209 ILHPLLGCSDPYALTR---VLHEVEPRYVVLYDSELTFVRQLEIYRASRPGKPLRVYFLI 265
Query: 678 YEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
Y STE Q++ +R+E AFE LIR+K+ M++
Sbjct: 266 YGGSTEEQRYLTALRKEKEAFEKLIREKASMVV 298
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 377 VLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDC 436
VLE PKW+ L EVL+EIE A ++E L G G VL+ D+ +C QL +
Sbjct: 30 VLESNPKWEALTEVLKEIE------AENKESEALGG----PGQVLICASDDRTCSQLREY 79
Query: 437 IRNGSEKVM 445
I G+E +
Sbjct: 80 ITIGAEAFL 88
>gi|347832217|emb|CCD47914.1| hypothetical protein [Botryotinia fuckeliana]
Length = 392
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 57/85 (67%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
VH Y + D+ IL+ +KP I++Y PD SFVR++EVY++ + ++VYFL+Y S E Q
Sbjct: 40 VHAYDGDMDEHILEEVKPRYIIMYEPDTSFVRRVEVYRSSHNDRNVRVYFLYYGGSVEEQ 99
Query: 686 KFKAGIRRENGAFESLIRQKSFMMI 710
++ + RRE AF LI++K+ M +
Sbjct: 100 RYLSSTRREKDAFTKLIKEKANMSV 124
>gi|403223062|dbj|BAM41193.1| uncharacterized protein TOT_030000456 [Theileria orientalis strain
Shintoku]
Length = 1187
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 132/286 (46%), Gaps = 32/286 (11%)
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I ++ A R LY +G + + RIL+ DLL+ ++ + G++++N H + E F
Sbjct: 303 IDGNVLATARQQLYVNGGCYVINSRILLNDLLSGKILPEIIGGIVVMNAHQIMEEYNIAF 362
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTER--IMKSLFIRKLHLWPRFQVNVSEELE 193
+ R+++ N+ A+++A SD V+ F +K++F + +H++PR + L
Sbjct: 363 VVRLLRMRNKLAFVKAISDS----VANFKGNNLSFCLKNIFTKNVHIYPRCHHLIESVLN 418
Query: 194 RE--PPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDE 251
P+ +V +P+S + K+IL+++ ++ M++ K D++ V +K +
Sbjct: 419 DSQIQPLTFEVFLPLSDNATSVYKSILKMIWTVVESMKRL-KYDIDMNKVVYTTYKGLIK 477
Query: 252 ILRRQLDPI-------------------WHILGKKTKQLVSDLKTLRKLLDYLVRYDAVT 292
IL +Q+ + + L R LLD L+ D ++
Sbjct: 478 ILDKQVTNVNVYQLYLNTTSGGGSQTSTSSSSTSGVSYYIDTLLKFRILLDSLLYMDPIS 537
Query: 293 YLKYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVEL 338
+++ L+ ++ W+ + K+F + +R+++ D ++L
Sbjct: 538 FVEKLERMKNDN---PDWLCTPNGIKLFKKSNERLFKIDE-DNIDL 579
>gi|300121212|emb|CBK21593.2| unnamed protein product [Blastocystis hominis]
Length = 332
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSS---P 55
+ F + + +LL++ GL++LS +LIA + ++ + +L++ P
Sbjct: 1 MNFLKQGVIDLLED--DGLLVLSRECGYRELIARFIKYYAMKCNEQHNVVFILNAEHIIP 58
Query: 56 NLKSQIIHYLAPNAPLLPSEITADL-PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
L ++ ++ + L P EITA+ R LY G ++F+T +L +D L +P
Sbjct: 59 FLMDELGE-MSIDKSLFPQEITANSGNVKERQMLYKRGGVYFITSVLLQLDFLQNHIPCD 117
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
N+AGL+I + H L ST T C ++ +++ FSD A F + + L
Sbjct: 118 NIAGLLICDVHMLHPGST-TLFCTLLFRHRCNGFVKCFSDNANACSRAFPQLSSFLNELT 176
Query: 175 IRKLHLWPRFQVNVSEELEREP 196
+ L L+PR++ V+E L + P
Sbjct: 177 VSFLFLYPRYRDIVNETLMQYP 198
>gi|392342769|ref|XP_003754693.1| PREDICTED: DNA repair endonuclease XPF-like, partial [Rattus
norvegicus]
Length = 512
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L ++P +V+Y +++FVRQ+E+Y+A P L+VYF Y STE Q++ +R+E
Sbjct: 165 VLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFFVYGGSTEEQRYLTALRKEKE 224
Query: 697 AFESLIRQKSFMMIP 711
AFE LIR+K+ M++P
Sbjct: 225 AFEKLIREKASMVVP 239
>gi|240273316|gb|EER36837.1| DNA repair protein RAD1 [Ajellomyces capsulatus H143]
Length = 866
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V+ Y + D +L+ +KP I++Y PD +F+R++EVY++ + +++VYFL+Y S E Q
Sbjct: 576 VYSYQGDVDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTDREVRVYFLYYGGSVEEQ 635
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + I
Sbjct: 636 RYLSAVRREKDAFTKLIKEKGSMALTI 662
>gi|325095800|gb|EGC49110.1| DNA repair protein RAD1 [Ajellomyces capsulatus H88]
Length = 975
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V+ Y + D +L+ +KP I++Y PD +F+R++EVY++ + +++VYFL+Y S E Q
Sbjct: 593 VYSYQGDVDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTDREVRVYFLYYGGSVEEQ 652
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + I
Sbjct: 653 RYLSAVRREKDAFTKLIKEKGSMALTI 679
>gi|225558074|gb|EEH06359.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 975
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V+ Y + D +L+ +KP I++Y PD +F+R++EVY++ + +++VYFL+Y S E Q
Sbjct: 593 VYSYQGDVDDHVLEEVKPRYIIMYEPDAAFIRRVEVYRSSHTDREVRVYFLYYGGSVEEQ 652
Query: 686 KFKAGIRRENGAFESLIRQKSFMMIPI 712
++ + +RRE AF LI++K M + I
Sbjct: 653 RYLSAVRREKDAFTKLIKEKGSMALTI 679
>gi|440301255|gb|ELP93670.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Entamoeba
invadens IP1]
Length = 903
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 152/312 (48%), Gaps = 43/312 (13%)
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
PL+ +I + + R LY +G I+F+T RILI DL+++ +N L +++ +
Sbjct: 132 PLM--QIDFRISSESRKELYKNGGIYFITSRILISDLISEDFTWTN-TFLYLVDIEDVIR 188
Query: 130 NSTETFICRIIKSL----NREAYIRAFSDKPTAMVSGFAKT--ERIMKSLFIRKLHLWPR 183
+F+ + SL NR +RAF+ K A + F +T E+I + L I K+ +P
Sbjct: 189 RFHLSFVTHVYASLLTDRNR---VRAFTQK--AHILSFIETSLEQIKQRLLIEKVFFYPY 243
Query: 184 FQVN-VSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVE 242
+ V+ + VV ++V ++ +M I++A+ E M E+R + L E
Sbjct: 244 SRDEAVTARINFTHFVVYSIKVELTLHMQIIERALYETMKVISTEIRARLNLTESALPDE 303
Query: 243 NGLFKSFDEILRRQLDPIWHILGKKTKQLVS----DLKTLRKLLDYLVRYDAVTYLKYLD 298
LF F+ ++ ++ G + + +S DLK+LR ++ + ++ V + ++
Sbjct: 304 KLLFGEFERRVK------YYNRGSRYDEEISSMCLDLKSLRTVMFSMYLFNPVLFYIQVE 357
Query: 299 TLRV----SESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKR--KL 352
+R+ ESF W+ +S +F +AK+R++ NG++ V +K+ +L
Sbjct: 358 IMRLMLWGEESF--FWLEKKSMSLVFTHAKERMW----------NGETFQVEKQKKVEEL 405
Query: 353 KKVDNNEDEDGG 364
K++ E+E G
Sbjct: 406 KEIIQQENEHGN 417
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
KP +V+Y+ + R +E Y ++ Y L Y S E K++ IRRE AFE L
Sbjct: 604 KPRALVLYNCSLWVTRVVETYALRQEE-DVRCYMLTYSGSYESLKYQQSIRREKKAFEDL 662
Query: 702 IRQK 705
I+++
Sbjct: 663 IKKE 666
>gi|429966069|gb|ELA48066.1| hypothetical protein VCUG_00489 [Vavraia culicis 'floridensis']
Length = 773
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 11/231 (4%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII 62
L + + ++ E EP+ L++++ GL+LPK++ ++ L++ L+++S+ +
Sbjct: 4 LSYEKLVLKECSSEPH--LLMMAEGLNLPKMVITLASLYNYPDALCLIINSNDKFDT--- 58
Query: 63 HYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL 122
L N + + L R Y G + + LI DLL + L ++ + ++
Sbjct: 59 --LFANESFTSLKTYSTLK---RIENYKIGGVKICQAQALISDLLNKSLDAKLISAIFVV 113
Query: 123 NTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP 182
N + ENS F+ + + I+AF++ + G + + L +R + L+P
Sbjct: 114 NAEEVKENSITAFVLHYMALNSSNTVIKAFTEDAIKVSKGHFYLDDFLGVLKLRNVVLFP 173
Query: 183 RFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
RFQ +VSEEL V+V++ MS ++ IQ +++++ + E K +K
Sbjct: 174 RFQKDVSEELNTSSE-FVEVKMKMSGWLEEIQLYLMDLIQSVTNEKEKYSK 223
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 638 LDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGA 697
LD+++ ++V+ ++ R+IE + K+ +YFL+Y++S E +++ IR E A
Sbjct: 475 LDVIQQNIVVLVDFNLGTFRKIERMRR-----KMLIYFLYYKESYEEEQYVRRIREEKEA 529
Query: 698 FESLIRQKS 706
FE I +K+
Sbjct: 530 FERFINEKA 538
>gi|440491389|gb|ELQ74038.1| Structure-specific endonuclease ERCC1-XPF, catalytic component
XPF/ERCC4 [Trachipleistophora hominis]
Length = 770
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+L + + I+ E E + L++++ GL+LPK++ ++ L++ L++++
Sbjct: 3 LLNYEKLILKECSSESH--LLVMAEGLNLPKIVTTLASLYNYPDTLCLIINTDDQFD--- 57
Query: 62 IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
+ + + L + T+ N Y G + + LI DLL + L +A + +
Sbjct: 58 VLFADESFTSLKTSSTSKRLEN-----YKVGGVKICQAQTLISDLLNRNLDVQLIAAIFV 112
Query: 122 LNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW 181
+N + ENS FI I + I+AF++ + + + L +R + L+
Sbjct: 113 VNAEDVKENSVIAFILHYIALNSSNTVIKAFTENAIKVSRRYFHLNNFLDILKVRNVILF 172
Query: 182 PRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNK 233
PRFQ ++++EL ++V++ MS ++ IQ +L+++ + EM K NK
Sbjct: 173 PRFQKDINDELSTSSE-FIEVKMKMSGWLEEIQLYLLDLIQSVKNEMEKYNK 223
>gi|429963301|gb|ELA42845.1| hypothetical protein VICG_00160 [Vittaforma corneae ATCC 50505]
Length = 751
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 43/330 (13%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60
M+LE+ + I+ + E L ++S GL +++ ++L ++S LS N+
Sbjct: 1 MLLEYEKEILENINHE--ACLAVMSKGLRYTEIVLALLKMYSNE----YCLSFVLNMNEY 54
Query: 61 IIHYLAP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
Y + + PL + L A+ R Y SG +F+ +P +L D + + + ++ L
Sbjct: 55 ENEYFSKQDIPLFCN--VGKLAASQRSEKYKSGGVFYGSPTVLASDFVNKSVQIEKISTL 112
Query: 120 IILNTHALTENSTETFICRIIKSLNREAYIRAF-SDKPTAMVSGFAKTERIMKSLFIRKL 178
+ILN + +S +FIC + K N I+AF SD SG E+I +SL + K+
Sbjct: 113 MILNAENIEPDSAISFICYLFKENNSLGLIKAFTSDAIKIYESGL---EQIARSLCLNKI 169
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
+PRF V L V V + +++MG +A L + D +K++ V
Sbjct: 170 LFYPRFHELVKSSLSEIN--VTQVHLRQNEFMG---EATLLIEDV-IKKVYSNAHGGV-- 221
Query: 239 LTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
G F+ ++ Q D+ +KL+ L D++T Y
Sbjct: 222 -----GEFEYMKVLIYNQQS--------------HDIANFKKLISLLFNTDSLTTFLYYQ 262
Query: 299 TL---RVSESFRSVWIFAESSYKIFDYAKK 325
+ + + S WIF SS+ + D +K
Sbjct: 263 AMIDQQKKNNSSSSWIFDGSSHALLDVLRK 292
>gi|344240239|gb|EGV96342.1| DNA repair endonuclease XPF [Cricetulus griseus]
Length = 585
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 609 SLKTDTAESKDSKPVPPVHFYALESD----QPILDILKPFVIVVYHPDMSFVRQIEVYKA 664
+L +D+A +P+ +H SD +L ++P +V+Y +++FVRQ+E+Y+A
Sbjct: 200 NLSSDSAYGILKEPLTIIHPLVGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRA 259
Query: 665 ENPSIKLK------VYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIP 711
P L+ VYFL Y STE Q++ +R+E AFE LIR+K+ M++P
Sbjct: 260 SRPGKPLRQVCAWRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVP 312
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 36/137 (26%)
Query: 319 IFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVL 378
+F A+ RVYR V+LN KK +E +G + E VL
Sbjct: 1 MFVNARARVYRVP---DVKLN-------------KKAKMSESAEGQETKK------ELVL 38
Query: 379 EEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIR 438
E PKW+ L EVL+EIE A ++E L G G VL+ D+ +C QL D +
Sbjct: 39 ESNPKWEALSEVLKEIE------AENKESEALGGP----GQVLICASDDRTCCQLRDYLT 88
Query: 439 NGSE----KVMREEWEK 451
G+E ++ R+ +EK
Sbjct: 89 AGAEAFLLRLYRKTFEK 105
>gi|209945556|gb|ACI97009.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 56/264 (21%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TVEN + + L+ QL WH L +TK +DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVENCVXXXXXKXLQAQLXXXWHQLNSQTKLXXADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRS 333
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----- 117
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVL-E 392
NGQ E E PKW+ L ++L +
Sbjct: 118 -----NGQQ--------------------------------EFEPEPCPKWQTLTDLLTK 140
Query: 393 EIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMREEWEKY 452
EI + + S ++ VL+ C+D +C QL+ + G + + ++ ++
Sbjct: 141 EIPGDMRRSRRSEQQ----------PKVLILCQDARTCHQLKQYLTQGGPRFLLQQALQH 190
Query: 453 LLSKVQLRSVQTSSKKKKSKEPKG 476
+ +L + +S PK
Sbjct: 191 EVPVGKLSDNYAKESQTRSAPPKN 214
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P YFL + + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRXXPPXXXXXXYFLIHAXXXXXXXYLXXLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|7716686|gb|AAF68493.1|AF252710_1 meiotic-9, partial [Drosophila simulans]
gi|7716698|gb|AAF68499.1|AF252716_1 meiotic-9, partial [Drosophila simulans]
Length = 255
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 53/211 (25%)
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 1 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 60
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ NGQ
Sbjct: 61 YRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----------NGQQ--------------- 95
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E PKW+ L ++L + ++++ E+
Sbjct: 96 -----------------EFEPEPCPKWQTLTDLLTKEVPGDMRRSRRSEQ---------Q 129
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + G + + ++
Sbjct: 130 PKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 160
>gi|7716688|gb|AAF68494.1|AF252711_1 meiotic-9, partial [Drosophila simulans]
Length = 255
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 53/211 (25%)
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 1 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 60
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ NGQ
Sbjct: 61 YRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----------NGQQ--------------- 95
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E PKW+ L ++L + ++++ E+
Sbjct: 96 -----------------EFEPEPCPKWQTLTDLLTKEVPGDMRRSRRSEQ---------Q 129
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + G + + ++
Sbjct: 130 PKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 160
>gi|7716690|gb|AAF68495.1|AF252712_1 meiotic-9, partial [Drosophila simulans]
gi|7716692|gb|AAF68496.1|AF252713_1 meiotic-9, partial [Drosophila simulans]
gi|7716694|gb|AAF68497.1|AF252714_1 meiotic-9, partial [Drosophila simulans]
gi|7716696|gb|AAF68498.1|AF252715_1 meiotic-9, partial [Drosophila simulans]
Length = 255
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 53/211 (25%)
Query: 240 TVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDT 299
TVEN + K+F +IL+ QLD IWH L +TK +V+DLK LR L+ + +DAV+ ++
Sbjct: 1 TVENCVTKTFHKILQAQLDCIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSAYAFMKR 60
Query: 300 LRVSESF--RSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDN 357
R +E S W +++ +IF +++RV+ NGQ
Sbjct: 61 YRSTEYALSNSGWTLLDAAEQIFKLSRQRVF----------NGQQ--------------- 95
Query: 358 NEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDH 417
E E PKW+ L ++L + ++++ E+
Sbjct: 96 -----------------EFEPEPCPKWQTLTDLLTKEVPGDMRRSRRSEQ---------Q 129
Query: 418 GIVLVACKDECSCMQLEDCIRNGSEKVMREE 448
VL+ C+D +C QL+ + G + + ++
Sbjct: 130 PKVLILCQDARTCHQLKQYLTQGGPRFLLQQ 160
>gi|123505623|ref|XP_001329017.1| ERCC4 domain containing protein [Trichomonas vaginalis G3]
gi|121911967|gb|EAY16794.1| ERCC4 domain containing protein [Trichomonas vaginalis G3]
Length = 723
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL 65
+Q I + L E GLV+ G+ +++ +++ +S + + N K +II
Sbjct: 4 YQKQIWDTLLEQESGLVLCGKGMDTIEIVKQLVVKYSQESKFVFVFGCPENAKYKIIWEC 63
Query: 66 AP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
A LP +I + R Y++ ++F +P IL D L + + + + G+II N
Sbjct: 64 ADCGIEFLPKDIEKAVGKKERDQAYAANNVYFHSPGILAKDFLLETIDPTKIEGIIIYNA 123
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
++ + + KS + + +I+AFS++P + F + +M L+IR ++ PRF
Sbjct: 124 ESILRDPSLQTCIAYYKSHHPKGFIKAFSERP----AEFTELSSVMDLLWIRFVYFSPRF 179
Query: 185 QVNVSEEL 192
+ V +
Sbjct: 180 EETVKNSI 187
>gi|290999114|ref|XP_002682125.1| predicted protein [Naegleria gruberi]
gi|284095751|gb|EFC49381.1| predicted protein [Naegleria gruberi]
Length = 626
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 278 LRKLLDYLVRYDAVTYLKYLDTLRVSESF----RSVWIFAESSYKIFDYAKKRVYRFTRS 333
+R LL YL+ YD VT+ YL+TLR+S+ S W+ +++ I+ YAK R+Y +
Sbjct: 1 MRSLLFYLLNYDCVTFYDYLETLRLSDGKSGIPSSTWLTTDTASDIYQYAKDRIYTVS-- 58
Query: 334 DGVELNGQSKSVTGKKRKLKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEE 393
+ + KS K++ L ++++N D S S + LEE PKWK L +E
Sbjct: 59 -----SNKVKSPLKKQKTLTQMESNRTIDPYVSVDSIQF----HLEENPKWKQLENTIES 109
Query: 394 IEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVM 445
I E + + N +G VL+ +E +C Q+ + G + ++
Sbjct: 110 I----------YETIQNNNNPNINGRVLILASNEKTCSQIRTYLELGGKTLL 151
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYE-DSTEVQKF 687
++L ILD L P +++Y D+SF+R+IE Y+ + P I L VY L Y+ +S E +++
Sbjct: 303 HSLYDTSTILDDLMPSFVILYENDLSFIRRIEHYQCKYPYIPLHVYLLSYDRNSVEYKQY 362
Query: 688 KAGIRRENGAFESLIRQKSFMMIPID 713
+A + RE AF+ LI + I ID
Sbjct: 363 QATVEREKEAFKKLIVSYGRLTIVID 388
>gi|84784047|gb|ABC61988.1| Rad1-like protein [Trichomonas vaginalis]
Length = 547
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL 65
+Q I + L E GLV+ G+ +++ +++ +S + + N K +II
Sbjct: 4 YQKQIWDTLLEQESGLVLCGKGMDTIEIVKQLVVKYSQESKFVFVFGCPENAKYKIIWEC 63
Query: 66 AP-NAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
A LP +I + R Y++ ++F +P IL D L + + + + G+II N
Sbjct: 64 ADCGIEFLPKDIEKAVGKKERDQAYAANNVYFHSPGILAKDFLLETIDPTKIEGIIIYNA 123
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
++ + + KS + + +I+AFS++P + F + +M L+IR ++ PRF
Sbjct: 124 ESILRDPSLQTCIAYYKSHHPKGFIKAFSERP----AEFTELSSVMDLLWIRFVYFSPRF 179
Query: 185 QVNVSEEL 192
+ V +
Sbjct: 180 EETVKNSI 187
>gi|392331615|ref|XP_001077837.3| PREDICTED: uncharacterized protein LOC687284 [Rattus norvegicus]
Length = 261
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+LE+ + + ELL + GLV+ + GL +L+ L LH +L+L++ P +
Sbjct: 146 LLEYERQQVLELLD--SDGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYF 203
Query: 62 IHYLA-PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
I+ L LP +T ++ +N R+ +Y+ G I F T RIL+VD LT R+P+ + G
Sbjct: 204 INQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLTGRIPSDLITG 261
>gi|355686460|gb|AER98065.1| excision repair cross-complementing rodent repair deficiency,
complementation group 4 [Mustela putorius furo]
Length = 73
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 183 RFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN-KVDVEDLTV 241
RF V V+ LE+ P VV++ V M+ M IQ AIL++++ACLKE++ N ++VEDL++
Sbjct: 1 RFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDLSL 60
Query: 242 ENGLFKSFDEILR 254
EN + K FD+ +R
Sbjct: 61 ENAIGKPFDKTIR 73
>gi|209945550|gb|ACI97006.1| meiotic 9 [Drosophila melanogaster]
Length = 472
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 217 ILEVMDACLKEMRKTNK-VDVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDL 275
ILE+M+ ++E+++ N+ VD+E +TV + QLD WH L +TK +V+DL
Sbjct: 3 ILEIMNFLVQEIKRINRTVDMEAVTVXXXXXXXXXKXXXXQLDCXWHQLXXQTKLIVADL 62
Query: 276 KTLRKLLDYLVRYDAVTYLKYLDTLRVSESF--RSVWIFAESSYKIFDYAKKRVY 328
K LR L+ + +DAV+ ++ R +E S W +++ +IF +++RV+
Sbjct: 63 KILRSLMISTMYHDAVSAYAFMKRYRSTEYALSNSGWTLLDAAEQIFKLSRQRVF 117
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 325 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 384
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 385 EKAAFEFIIDTKSKMVIP 402
>gi|399218331|emb|CCF75218.1| unnamed protein product [Babesia microti strain RI]
Length = 1055
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R LY+ G ++ + + ++D+L L ++G++++N H + ++ +F+ + ++ N
Sbjct: 286 REQLYTRGGVYCASAEVFLLDILCNSLLIECISGIVVMNAHKVCSDTRLSFLLNLYRNGN 345
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL--HLWPRFQVNVSEELERE--PPVVV 200
+++A SD ++ F+ I+ + HL PR +S L R+ P
Sbjct: 346 SLGFVKAISDD----INAFSDV-NIVNQFHCEDMSIHLLPRSNSLISGSLSRKNMQPETH 400
Query: 201 DVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV---------DVEDLTVENGLFKSFDE 251
++ VP+ + IQ ++ ++ + ++ K N D+ L E ++
Sbjct: 401 EISVPLPPQLERIQTTLVTILKKIINQLGKDNTTKMLMAEIGFDLNTLIYEWNKISLLEK 460
Query: 252 IL-RRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVW 310
L + + +W KT ++ L L KLL + D +++LK +D R+ + S W
Sbjct: 461 RLGKSSISSVW----DKTSDDLNALSILSKLLHLSQKIDEISFLKKVDIARL-KFIDSPW 515
Query: 311 IFAESSYKIFDYAKKRVYR 329
++ F +++RV++
Sbjct: 516 MWERDVLLFFKLSEERVFK 534
>gi|195565033|ref|XP_002106111.1| mei-9 [Drosophila simulans]
gi|194203482|gb|EDX17058.1| mei-9 [Drosophila simulans]
Length = 602
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAEN---PSIKLKVYFLFYEDSTEVQKFKAGIRR 693
+L+ L+P +V+Y+ +++ +RQ+EV++A P+ ++KVYFL + + E Q + +RR
Sbjct: 217 MLEQLQPHYVVMYNMNVTAIRQLEVFEARRRLPPADRMKVYFLIHARTVEEQAYLTSLRR 276
Query: 694 ENGAFESLIRQKSFMMIP 711
E AFE +I KS M+IP
Sbjct: 277 EKAAFEFIIDTKSKMVIP 294
>gi|150865875|ref|XP_001385266.2| hypothetical protein PICST_60166 [Scheffersomyces stipitis CBS
6054]
gi|149387131|gb|ABN67237.2| DNA repair protein [Scheffersomyces stipitis CBS 6054]
Length = 564
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 140/342 (40%), Gaps = 73/342 (21%)
Query: 375 EEVLEEAPKWKVLREVLEEIEEERLKQASSREEVLLDGEENDHGIVLVACKDECSCMQLE 434
E +LEE PKW L +L++I E K SS + G +L+ C D + QL
Sbjct: 11 EYLLEELPKWHELGNMLDDIFHE--KSLSSE----------NSGPILIMCSDTRTARQLY 58
Query: 435 DCIRNGSE-KVMREEW---EKYLLSKV----QLRSVQTSSKKKKSKEPKGYGILDGVAPV 486
I + E KV +++ ++++SK+ Q + + SK+
Sbjct: 59 QVIESMKEIKVSGKKYFSSRRFMISKLHEYLQWKEINNLSKQ------------------ 100
Query: 487 KIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGP 546
N + Q + ++ + S RN G+ K R G
Sbjct: 101 ---LNEDLEKSEDQTEEQIITSKSFTRN-------------------GQPASKRRRTRGA 138
Query: 547 ACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVV--GYSGGMLETAFVEKEV 604
+ + A S N + A++ + G ++ + VV G +G FVE E
Sbjct: 139 SSTARVAKLYSGEN-RGAVDIDENVLGQMDQEIVESEEDDVVETGPTG-----LFVETED 192
Query: 605 QWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKA 664
SL + + Y + +L + P I++Y P++SF+R+ E+++A
Sbjct: 193 IIVPSLSHINMGDQ-----VIIQVYDEGRNDALLQEISPSYIIMYEPNLSFIRRTEIFQA 247
Query: 665 ENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKS 706
N KV+ +FY +STE QK+ +++E AF LIR+K+
Sbjct: 248 INRDQPAKVFVMFYSNSTEEQKYLLRLKKEKDAFTKLIREKA 289
>gi|308509188|ref|XP_003116777.1| hypothetical protein CRE_02255 [Caenorhabditis remanei]
gi|308241691|gb|EFO85643.1| hypothetical protein CRE_02255 [Caenorhabditis remanei]
Length = 383
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 637 ILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENG 696
+L+ KP IV+Y + +RQIE+Y++ +P +L VY+L Y +STE ++ I RE
Sbjct: 17 LLEQKKPSAIVLYTMSLQTLRQIEIYRSTHPDRQLHVYWLQYTESTEESRYLESINRETL 76
Query: 697 AFESLIRQKSFMMI 710
+FE LIR++ +MI
Sbjct: 77 SFEMLIREQGTLMI 90
>gi|409074913|gb|EKM75301.1| hypothetical protein AGABI1DRAFT_109572 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 477
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 48/73 (65%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
+P IV++ P + F+R++EVY++ P + ++ Y + Y +S E ++ A IR+E +FE L
Sbjct: 149 QPRFIVMFEPSVEFIRRVEVYRSSYPGMAVRAYHMVYANSCEEHRYLAVIRKEKESFEWL 208
Query: 702 IRQKSFMMIPIDQ 714
+++ M++ +++
Sbjct: 209 FKERGSMLLTLEE 221
>gi|68477617|ref|XP_717121.1| hypothetical protein CaO19.5318 [Candida albicans SC5314]
gi|68477780|ref|XP_717042.1| hypothetical protein CaO19.12778 [Candida albicans SC5314]
gi|46438739|gb|EAK98065.1| hypothetical protein CaO19.12778 [Candida albicans SC5314]
gi|46438821|gb|EAK98146.1| hypothetical protein CaO19.5318 [Candida albicans SC5314]
Length = 591
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 626 VHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQ 685
V Y + + IL L P I++Y ++ F+R++EVY+A N YF++Y DS E Q
Sbjct: 231 VQAYNDKFNASILQELHPSHIIMYEQNLPFIRRVEVYQAINYENPAHAYFMYYGDSVEEQ 290
Query: 686 KFKAGIRRENGAFESLIRQKS 706
K+ ++RE AF LI++K+
Sbjct: 291 KYLLRVKREKEAFTKLIKEKA 311
>gi|296109929|ref|YP_003616878.1| DEAD/DEAH box helicase domain protein [methanocaldococcus infernus
ME]
gi|295434743|gb|ADG13914.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus infernus
ME]
Length = 770
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL-LHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q I A L+ + LV+L +GL + A V+ L + G +L+++ + L Q H
Sbjct: 18 YQQLIAASALK--DNTLVVLPTGLGKTAIAALVIAGLLTKKDGKVLIIAPTRPLVEQ--H 73
Query: 64 YLAPNAPLLPS---EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
Y L IT +P R +Y G+IF TP+++ D+L+ RL + LI
Sbjct: 74 YRTFKDILNIDGIVAITGKIPPAKREKIYREGKIFIATPQVIENDILSGRLKVDDFILLI 133
Query: 121 ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
H N F+ KS + +I A + P V K I ++L I+++
Sbjct: 134 ADEAHHTVGNHAYAFVA---KSFKDKCHILALTASPGHDVD---KVMEICENLGIKRIE- 186
Query: 181 WPRFQVNVSEELEREPPVVVDVR-VPMSKYMGGIQKAILEVMDACLKEMRK--------- 230
F+ E+++ P V VR +P+ + K L+++D LKE K
Sbjct: 187 ---FRDESDEDVK---PYVAKVRMIPIRVELLEEFKKALKLLDDALKERLKFLKDHGVID 240
Query: 231 -TNKVDVEDLTVENGLFKSFDEI 252
N E L + N LF DE+
Sbjct: 241 SINVTKTELLELNNKLFSYDDEV 263
>gi|406607066|emb|CCH41581.1| fanconi anemia group M protein [Wickerhamomyces ciferrii]
Length = 1307
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 62 IHYLAPNAPLLPSEITA-----DLPAN-----------HRHTLYSSGQIFFVTPRILIVD 105
I ++AP PL+ +I A D+P+ +R +++S ++FF TP+++ D
Sbjct: 132 IIFMAPTRPLVAQQIQACLGVTDIPSGDTAILLDKTRKNRPEIWNSKRVFFTTPQVVEND 191
Query: 106 LLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAK 165
L T L + L+I H N T + + ++ N + A + P A + G
Sbjct: 192 LKTGILNPKEIVCLVIDEAHRARGNYAYTNVVQFVERFNTSYRVLALTATPAADIEG--- 248
Query: 166 TERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
+ ++ +L I ++ + +++ + ++R+ V ++ V ++ M I + + E +D L
Sbjct: 249 VQEVVNNLHISQIEIRTEESIDIVKYMKRKETVRIN--VGLNSEMEDIIELLSEAIDPVL 306
Query: 226 KEMRKTNKVDVED 238
K+ + + +V D
Sbjct: 307 KQANEAHIYEVTD 319
>gi|341881136|gb|EGT37071.1| hypothetical protein CAEBREN_11761 [Caenorhabditis brenneri]
Length = 354
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 656 VRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMI 710
+RQIE+Y++ NP +L VY+L Y +STE ++ I RE +FE LIR++ +MI
Sbjct: 6 LRQIEIYRSTNPDRQLHVYWLQYTESTEESRYLESINRETLSFEMLIREQGTLMI 60
>gi|407038809|gb|EKE39319.1| DNA repair endonuclease, putative [Entamoeba nuttalli P19]
Length = 882
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 7/235 (2%)
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
PLL I L R LY +G IFFVT RILI DL++ N I + + +
Sbjct: 131 PLLS--IDYKLSIEKRKELYKNGGIFFVTTRILISDLISNEF-NWNSCIFYIFDIEDIQK 187
Query: 130 NSTETFICRIIKSLNR-EAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP-RFQVN 187
+FI ++ +L + + +R + K +V ERI + I K+ + F
Sbjct: 188 RFNISFIGQVFLTLTKNKGLLRCLTQKTHQLVGIPKIYERIKEIFRIDKVFFFSYTFPEL 247
Query: 188 VSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFK 247
+ E + VV +++ MS+ M I++ I E M E+R K+ L LF
Sbjct: 248 IKIRNEFKYFNVVQLKLQMSESMKIIEQGIFESMKYIAIEIRHRLKIQSNVLPDSMLLFG 307
Query: 248 SFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRV 302
F++ + I + + + D+KTLR L+ L + V + L+T+++
Sbjct: 308 EFEKRISNYNKGIDY--DSDIESMCIDIKTLRHLMFSLYILNPVLFFIQLETMKL 360
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
KP I++Y+ + R +E Y + ++K+Y LFYE S E+ K++ I RE AFE L
Sbjct: 580 KPKAIILYNCSLWVTRVLETY-VHSRDEEIKLYLLFYEKSYEMIKYQQTILREKNAFEQL 638
Query: 702 IR-----------QKSFMMIPI 712
++ QK +IPI
Sbjct: 639 VKTEMKSKELNIDQKEIEVIPI 660
>gi|67484578|ref|XP_657509.1| DNA repair endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56474762|gb|EAL52119.1| DNA repair endonuclease, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702148|gb|EMD42842.1| DNA repair endonuclease xpf, putative [Entamoeba histolytica KU27]
Length = 882
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 7/235 (2%)
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
PLL I L R LY +G IFFVT RILI DL++ +N I + + +
Sbjct: 131 PLLS--IDYKLSIEKRKELYKNGGIFFVTTRILISDLISNEFNWNNCI-FYIFDIEDIQK 187
Query: 130 NSTETFICRIIKSLNR-EAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP-RFQVN 187
+FI ++ +L + + +R + K +V ERI + I K+ + F
Sbjct: 188 RFNISFIGQVFLTLTKNKGLLRCLTQKTHQLVVIPKIYERIKEIFRIDKVFFFSYTFPEL 247
Query: 188 VSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFK 247
+ E + VV +++ MS+ M I++ I E M E+R K+ L LF
Sbjct: 248 IKIRNEFKYFNVVQLKLQMSESMKIIEQGIFESMKYIAIEIRHRLKIQPNVLPDSMLLFG 307
Query: 248 SFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRV 302
F++ + I + + + D+KTLR L+ L + V + L+T+++
Sbjct: 308 EFEKRINNYNKGIDY--DSDIELMCIDIKTLRHLMFSLYILNPVLFFIQLETMKL 360
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
KP I++Y+ + R +E Y + ++K+Y LFYE S E+ K++ I RE AFE L
Sbjct: 580 KPKAIILYNCSLWVTRVLETY-VHSRDEEIKLYLLFYEKSYEMIKYQQTILREKNAFEQL 638
Query: 702 IR-----------QKSFMMIPI 712
++ QK +IPI
Sbjct: 639 VKTEMKSKELNIDQKEIEIIPI 660
>gi|148704700|gb|EDL36647.1| mCG118968 [Mus musculus]
Length = 1370
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 64 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 121
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 122 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 180
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P + + ++++ +L I K+ L SEE
Sbjct: 181 YCQVVRELVKYTTHFRILALSATPGSDIKA---VQQVITNLLIGKIEL-------RSEES 230
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 231 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 286
>gi|74197309|dbj|BAC34178.2| unnamed protein product [Mus musculus]
gi|74217148|dbj|BAC39257.2| unnamed protein product [Mus musculus]
Length = 1393
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 96 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 153
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 154 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 212
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P S ++++ +L I K+ L SEE
Sbjct: 213 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIEL-------RSEES 262
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 263 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 318
>gi|241568989|ref|XP_002402624.1| conserved hypothetical protein [Ixodes scapularis]
gi|215500065|gb|EEC09559.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1081
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLPS- 74
+VIL +GL IA+V++ + P+ + + P + QI Y PL +
Sbjct: 108 MVILPTGLG-KTFIAAVVMYNFYRWYPTGKIVFTAPTKPLVAQQIEACYKIMGIPLEDTL 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T ++PA R T + ++FF+TP++++ DLL L ++ L+I H N
Sbjct: 167 EMTGNVPAPRRATAWREKRVFFLTPQVMMNDLLRNALKPQDVKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
+ + I + + A S P + V+ +++ +L I + L +++ + +R
Sbjct: 227 QVVQEIMKYTNQFRVVALSATPGSDVNA---VRQVLSNLMISHVELRSEESIDIQKYTQR 283
Query: 195 EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+ V VP+ + +++ L+V+ L+ + +
Sbjct: 284 R--TIDKVVVPLGHEIVEVKRKFLQVVCMYLERLER 317
>gi|54112418|ref|NP_849243.2| Fanconi anemia group M protein homolog [Mus musculus]
gi|78099255|sp|Q8BGE5.3|FANCM_MOUSE RecName: Full=Fanconi anemia group M protein homolog; Short=Protein
FACM; AltName: Full=ATP-dependent RNA helicase FANCM
Length = 2021
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 96 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 153
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 154 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 212
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P S ++++ +L I K+ L SEE
Sbjct: 213 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIELR-------SEES 262
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 263 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 318
>gi|187957728|gb|AAI50786.1| Fanconi anemia, complementation group M [Mus musculus]
Length = 2021
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 96 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 153
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 154 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 212
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P S ++++ +L I K+ L SEE
Sbjct: 213 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIELR-------SEES 262
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 263 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 318
>gi|333910260|ref|YP_004483993.1| helicase [Methanotorris igneus Kol 5]
gi|333750849|gb|AEF95928.1| helicase domain protein [Methanotorris igneus Kol 5]
Length = 791
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q I+A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQVIVASALKK--NTLCVLGTGLGKTAIAALTIAGILSKKDGKVLIIAPSRPLVEQ--H 73
Query: 64 YLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
Y + L E +T P N R L+ G+IF TP+I+ DL+ RL +
Sbjct: 74 YNSMRNFLNIDEDKIIVLTGKTPPNKREELWKEGKIFIATPQIVENDLIAGRLNVDDFVL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + TF+
Sbjct: 134 LIADEAHHTTGNHSYTFVA 152
>gi|26343661|dbj|BAC35487.1| unnamed protein product [Mus musculus]
Length = 651
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 96 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 153
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 154 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 212
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P S ++++ +L I K+ L SEE
Sbjct: 213 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIELR-------SEES 262
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 263 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 318
>gi|405953921|gb|EKC21486.1| Fanconi anemia group M protein [Crassostrea gigas]
Length = 2327
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLK 58
V ++ +I+ + L + +V L +GL IASV++ + QG ++ ++ + L
Sbjct: 117 VRDYQYNIVQQALFK--NTMVTLPTGLG-KTFIASVVMFNYYRWYPQGKVVFMAPTKPLV 173
Query: 59 SQIIHYLAPNAPLLP----SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
+Q I N +P +E+T +P R + ++FF+TP++L DL P
Sbjct: 174 AQQIEACY-NIMGIPQEHTAEMTGSMPPQERRRAWEEKRVFFLTPQVLTNDLSRGTCPAQ 232
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
+ +++ H N + R + + + E + A S P + + ++++ +L
Sbjct: 233 QVKCVVVDEAHKALGNHAYCQVVRELMNYSNEFRVLALSATPGSDIKAV---QQVLSNLL 289
Query: 175 IRKLHLWPRFQVNVSE-ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
I + L +++ + R+ V + VP S+ + ++ +++MD + ++++
Sbjct: 290 ISHIELRTEDSIDIKQYSFNRQ---VDKIIVPFSQELTEVKNRYIKIMDVIVGKLKR 343
>gi|256086569|ref|XP_002579470.1| hypothetical protein [Schistosoma mansoni]
gi|353229673|emb|CCD75844.1| hypothetical protein Smp_083710 [Schistosoma mansoni]
Length = 1357
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 74 SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
+E+T + N R T++S+ Q+ F+TP++L+ DL T P +++ LI H T N
Sbjct: 189 AEVTGSIAQNKRKTIWSTYQVLFLTPQVLMNDLQTGVCPANSIRLLIFDEAHKATGNHAY 248
Query: 134 TFICRIIKS---LNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ RI+ + +R+ I A S P A + G + ++ +L I L L
Sbjct: 249 CQVLRILTNPPHTHRQFRIVALSATPAADIEG---VQTLIANLLISHLEL 295
>gi|157123248|ref|XP_001660079.1| hypothetical protein AaeL_AAEL009460 [Aedes aegypti]
gi|108874431|gb|EAT38656.1| AAEL009460-PA [Aedes aegypti]
Length = 1557
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 127/292 (43%), Gaps = 26/292 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI 76
LV+L +GL IA+V++ + P+ + + + P + QI +P E
Sbjct: 96 LVVLPTGLG-KTFIAAVVMYNLYRWYPTGKVIFMAPTRPLVNQQIEACYKIMG--IPKED 152
Query: 77 TADLPAN----HRHTLYSSGQIFFVTPRILIVDLLT--QRLPTSNLAGLIILNTHALTEN 130
TA++ +R L+ S ++F+VTP++++ D+ + Q P + + +++ H
Sbjct: 153 TAEMTGKQQRKNRTGLWQSKRVFYVTPQVVLADINSPEQNFPINEVKLVVVDEAHKAKGR 212
Query: 131 STETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE 190
T + + I S NR + A S P + A+ ++K+L I + + ++VS
Sbjct: 213 YAYTEVIKAIASTNRNFRVLALSATPGRTLEDVAE---VIKNLLISHIEVRWENSIDVSP 269
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLF---- 246
++ + V +P+ + I++ L+++D ++ + N + ++ G
Sbjct: 270 YTFKK--NIRTVVIPLGPNLSRIREHYLQILDPYVRRLLDANVISGHVGSLSRGWLIMEQ 327
Query: 247 KSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLD 298
K F E Q P + + VS + L+ LVR+ +L + +
Sbjct: 328 KRFRETNLIQRHPNYTAINSDFITCVS----MYHALELLVRHGVRAFLNFFE 375
>gi|26333531|dbj|BAC30483.1| unnamed protein product [Mus musculus]
Length = 519
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 96 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 153
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 154 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 212
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P S ++++ +L I K+ L SEE
Sbjct: 213 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIEL-------RSEES 262
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 263 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 318
>gi|254567149|ref|XP_002490685.1| ATP-dependent DNA helicase [Komagataella pastoris GS115]
gi|238030481|emb|CAY68405.1| ATP-dependent DNA helicase [Komagataella pastoris GS115]
gi|328351071|emb|CCA37471.1| fanconi anemia group M protein [Komagataella pastoris CBS 7435]
Length = 1001
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 11/213 (5%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLPSE 75
LV L +GL LIAS ++L+ S + + + + P + QI Y P +
Sbjct: 108 LVSLPTGLG-KTLIASTVMLNFYRWSETAKIIFMAPTRPLVAQQIRACYTITGIPPQDTA 166
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
I D R ++ S ++FF TP+++ DL L ++ L+I H +
Sbjct: 167 ILLDKTRRSREEIWDSKRVFFTTPQVVENDLTNGLLNPKDIICLVIDEAHRAKKRYAYNN 226
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE 195
+ + IK N + A + P+A V G + I+ +L I + + +++ + ++
Sbjct: 227 VAQYIKRFNTSFRLLALTATPSADVEG---VQEIVDNLMISSIEIRTDESLDIKKYIKNR 283
Query: 196 P--PVVVDVRVPMSKYMGGIQKAILEVMDACLK 226
V D M+ Y I +AI + + C+K
Sbjct: 284 TLEKVQCDPNERMTAYTELICEAIAPIYEQCVK 316
>gi|294495366|ref|YP_003541859.1| ERCC4 domain protein [Methanohalophilus mahii DSM 5219]
gi|292666365|gb|ADE36214.1| ERCC4 domain protein [Methanohalophilus mahii DSM 5219]
Length = 754
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGT---LLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K I ++L++ S + T +++LS + L Q + + L P E+
Sbjct: 34 LVVLPTGLG--KTIVALLVMASRLETTGKKVVMLSPTKPLVEQHAAFFSQMLNLKPEEVM 91
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T +LP R ++ G++ TP+++ DLLT+R+ ++A + H N + T
Sbjct: 92 TFTGNLPPAKREKMWEKGRVIVSTPQVIENDLLTKRISLRDVAHITFDEAHRAVGNYSYT 151
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+I + +E A + P S K + +SL I K+
Sbjct: 152 YIAEEYFNQAKEPLCLAITASPG---SSDEKIAEVCESLHIEKV 192
>gi|167389195|ref|XP_001738856.1| DNA repair endonuclease xp-f / mei-9 / rad1 [Entamoeba dispar
SAW760]
gi|165897684|gb|EDR24766.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Entamoeba
dispar SAW760]
Length = 882
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 19/300 (6%)
Query: 70 PLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
PLL I L R LY +G IFF+T RILI DL++ +N I + + +
Sbjct: 131 PLLS--IDYKLSVEKRKELYKNGGIFFITTRILISDLISNEFNWNNCI-FYIFDIEDIQK 187
Query: 130 NSTETFICRIIKSLNR-EAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWP-RFQVN 187
+F+ ++ +L + + +R + K +V ERI + I K+ + F
Sbjct: 188 RFNISFVGQVFLTLTKNKGLLRCLTQKTHQLVVVPKIYERIKEIFRIDKVFFFSYTFPEL 247
Query: 188 VSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFK 247
+ E + V+ +++ M+ M I++ I E M E+R + L LF
Sbjct: 248 IKIRSEFKFFNVIQLKLQMADSMKIIEQGIFESMKYIAIEIRHRLNIQSNVLPDSMLLFG 307
Query: 248 SFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFR 307
F++ + I + + + D+KTLR L+ L + V + L+T+++
Sbjct: 308 EFEKRISNYNKGINY--DSDIESMCVDIKTLRHLMFSLYILNPVLFFIQLETMKL----- 360
Query: 308 SVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK---LKKVDNNEDEDGG 364
VW E S +F KK + T + L + K + K+ K + + +E+E G
Sbjct: 361 LVW--GEDS--LFWLGKKTMELVTETTKARLWNKDKFLIEKQPKHIEMMNIIKHENEKGN 416
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 642 KPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDSTEVQKFKAGIRRENGAFESL 701
KP I++Y+ + R +E Y + ++K+Y LFYE S E+ K++ I RE AFE L
Sbjct: 580 KPKAIILYNCSLWVTRVLETY-VHSRDEEIKLYLLFYEKSYEMIKYQQTILREKNAFEHL 638
Query: 702 IR-----------QKSFMMIPI 712
++ QK +IPI
Sbjct: 639 VKTEMKSKELNINQKEIEVIPI 660
>gi|149051314|gb|EDM03487.1| rCG61774 [Rattus norvegicus]
Length = 647
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 64 YLAPNAPLLP-----------------SEITADLPANHRHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +E+T A +R ++SS ++ F+TP++++ DL
Sbjct: 15 FMAPTKPLVTQQMEACFHVMGIPQSHMAEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDL 74
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
+P +++ L++ H N + R + I A S P S
Sbjct: 75 TRGAVPAAHVKCLVVDEAHKALGNYAYCQVVRELVKYTNHFRILALSATPG---SDIKAV 131
Query: 167 ERIMKSLFIRKLHLWPRFQVNV---SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDA 223
++++ +L I K+ L ++ S E E V VP+ + +G IQK +++++
Sbjct: 132 QQVITNLLIEKIELRSEDSPDILPYSHERRVEKLV-----VPLGEELGAIQKTYVQILET 186
Query: 224 CLKEMRKTN---KVDVEDLT 240
+ K N K D+ +LT
Sbjct: 187 FASSLIKRNILMKRDIPNLT 206
>gi|354503753|ref|XP_003513945.1| PREDICTED: Fanconi anemia group M protein homolog, partial
[Cricetulus griseus]
Length = 1914
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 25 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 82
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A R ++ S ++ F+TP++++ DL + P + + L++ H N
Sbjct: 83 -AEMTGSTQAVSRKDIWCSKRVLFLTPQVMVNDLTREACPAARIKCLVVDEAHKALGNYA 141
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---S 189
+ R + I A S P S ++++ +L I K+ L ++ S
Sbjct: 142 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIELRSEDSPDILPYS 198
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E E V VP+ + +G IQK +++++ + + N K D+ +LT
Sbjct: 199 HERRVEKLV-----VPLGEELGAIQKTYIQILETFASPLIQRNVLMKRDIPNLT 247
>gi|301622529|ref|XP_002940588.1| PREDICTED: Fanconi anemia group M protein-like, partial [Xenopus
(Silurana) tropicalis]
Length = 595
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYL----APNAPLL 72
LV L +GL IA+V++ + PS + + + P + QI P +
Sbjct: 232 LVCLPTGLG-KTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACFRVMGIPQDHM- 289
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++ ++FF+TP++++ DL P S + L+I H N
Sbjct: 290 -AEMTGSTQAQNRKDMWEKHRVFFLTPQVMVNDLTRGACPASEIKCLVIDEAHKALGNHA 348
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT-ERIMKSLFIRKLHLWPRFQVNV--- 188
+ R + + + I A S P G K+ ++++ +L I ++ L ++
Sbjct: 349 YCQVVRELTNYTNQFRILALSATP----GGDTKSVQQVVSNLLISQIELRSEDSPDIQPY 404
Query: 189 SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
S E + E V VP+ + + +QK L+V++ + K N + D+ +LT
Sbjct: 405 SHERQLEKFV-----VPLGEELESVQKTYLQVLETFAGRLLKNNVLSRRDIPNLT 454
>gi|26352047|dbj|BAC39660.1| unnamed protein product [Mus musculus]
Length = 433
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLA-PNAPLL 72
LV L +GL IA+V++ + PS + + + P + Q+ H + P + +
Sbjct: 96 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHM- 153
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++SS ++ F+TP++++ DL +P +++ L++ H N
Sbjct: 154 -AEMTGSTQAVNRKEIWSSRRVLFLTPQVMVNDLTRGAVPATHVKCLVVDEAHKALGNYA 212
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R + I A S P S ++++ +L I K+ L SEE
Sbjct: 213 YCQVVRELVKYTTHFRILALSATPG---SDIKAVQQVITNLLIGKIEL-------RSEES 262
Query: 193 EREPPVVVDVR-----VPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
P + R VP+ + +G IQK +++++ + N K D+ +LT
Sbjct: 263 PDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIHRNVLMKRDIPNLT 318
>gi|336122551|ref|YP_004577326.1| helicase domain-containing protein [Methanothermococcus okinawensis
IH1]
gi|334857072|gb|AEH07548.1| helicase domain-containing protein [Methanothermococcus okinawensis
IH1]
Length = 797
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL--LHSPSQGTLLLLSSSPNLKSQII 62
+ Q I+A L++ L +L +GL IA++ + + S G +L+++ S L Q
Sbjct: 18 YQQVIVANALKK--NTLCVLGTGLG-KTAIATLTIAGMLSKKDGKVLIVAPSRPLVEQ-- 72
Query: 63 HYLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
HY + L E +T + + R ++ GQIF TP+I+ D++ R+ T++
Sbjct: 73 HYNSLKNFLNIDEDKIIVLTGKIAPSKRKKMWEEGQIFIATPQIVENDIVANRVNTNDFM 132
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
LI H T N + TF+ + ++ +A++ + P + +
Sbjct: 133 LLIADEAHHTTGNHSYTFVASVFRN---KAHVLGLTASPGSNI 172
>gi|194899456|ref|XP_001979275.1| GG24642 [Drosophila erecta]
gi|190650978|gb|EDV48233.1| GG24642 [Drosophila erecta]
Length = 1450
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLKSQIIHYLAPNAPLLPS--- 74
LV+L +GL IA+VL+ + +G ++ ++ + L SQ IH P PS
Sbjct: 79 LVVLPTGLG-KTFIAAVLMYNFYRWYPKGKIVFMAPTRPLVSQQIHASQKIMPF-PSADT 136
Query: 75 -EITADLPANHRHTLYSSGQIFFVTPRILIVDLLT----QRLPTSNLAGLIILNTHALTE 129
++T LP R L+ S ++FF TP+++ D+LT P ++ +++ H
Sbjct: 137 VQLTGQLPRPKRAELWDSKRVFFATPQVVHSDMLTADGGSNFPFGSIKLIVVDEAHRAKG 196
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
T + + + NR I A S P + A + ++L+I L + ++V
Sbjct: 197 RYAYTQVTDCLMARNRNFRILALSATPGRTMEDVAA---VCQNLYISNLQVRWDTSIDVQ 253
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
+ R + + V + + + ++ +L++++ L+++
Sbjct: 254 PYIHRR--TIRTIVVSLKERIKEPRERLLQIIEPYLRQL 290
>gi|300708054|ref|XP_002996215.1| hypothetical protein NCER_100721 [Nosema ceranae BRL01]
gi|239605496|gb|EEQ82544.1| hypothetical protein NCER_100721 [Nosema ceranae BRL01]
Length = 512
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R +Y G +F + RIL+ D L + ++ +II N + ENS E FI + + N
Sbjct: 92 RKKMYLKGGVFVCSSRILLTDFLENNINIEIISAIIINNADRIRENSLEAFILNVFRRKN 151
Query: 145 REAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRV 204
I+AFS G E+ + L+PRF + + + + +
Sbjct: 152 AHGLIKAFSSNCIPFACGIGSLEKYANTFRCNNFILYPRFHEEIQKSFKNDIKFLQH-EF 210
Query: 205 PMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE 237
M M +Q ++E+ LKE+ K K+DV+
Sbjct: 211 KMPDEMIELQMILIEI----LKELIKYYKLDVD 239
>gi|288931017|ref|YP_003435077.1| helicase [Ferroglobus placidus DSM 10642]
gi|288893265|gb|ADC64802.1| helicase domain protein [Ferroglobus placidus DSM 10642]
Length = 761
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 99/216 (45%), Gaps = 13/216 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHS---PSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K + ++L++ S G +L L+ + L Q +L + EI
Sbjct: 33 LVVLPTGLG--KTVVALLVIASRLHKLDGKVLFLAPTKPLVEQHAFFLKRTLNINEEEIV 90
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T ++P R +Y ++ TP+++ D+++ RL S+ + H N +
Sbjct: 91 SFTGEIPPEKRQRMYEKARVIVSTPQVIENDIISGRLTLSDFVLAVFDEAHRAVGNYSYV 150
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
FI R ++ I A + P S + + ++K+LFI + + + +V + +
Sbjct: 151 FIARRFVEESKNPLILAITASPG---SDPERIKEVVKNLFIENIEIRTEYDPDVRKYIAE 207
Query: 195 EPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
+ + V+V M + + ++A +V++ LK + +
Sbjct: 208 KK--IEWVKVDMPEELEKAKEAFEKVIEIRLKRLER 241
>gi|295148218|ref|NP_001171151.1| Fanconi anemia, complementation group M [Xenopus laevis]
gi|223929916|gb|ACN24616.1| Fanconi anemia protein [Xenopus laevis]
Length = 2166
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLA----PNAPLL 72
LV L +GL IA+V++ + PS + + + P + QI P +
Sbjct: 210 LVCLPTGLG-KTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACFRVMGIPQGHM- 267
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A +R ++ + ++FF+TP++++ DL P + L+I H N
Sbjct: 268 -AEMTGSTQAQNRKNIWETHRVFFLTPQVMVNDLTRGACPALEIKCLVIDEAHKALGNHA 326
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT-ERIMKSLFIRKLHLWPRFQVNV--- 188
+ R + + + I A S P G K+ ++++ +L I ++ L ++
Sbjct: 327 YCQVVRELTNYTNQFRILALSATP----GGDTKSVQQVVSNLLISQIELRSEDSSDIQPY 382
Query: 189 --SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
+ +LE+ VP+ + + +QK L+++D + + N + D+ +LT
Sbjct: 383 SHARQLEK-------FVVPLGEELESVQKTYLQLLDTFAGRLIQNNVLSRRDIPNLT 432
>gi|350579040|ref|XP_003480507.1| PREDICTED: Fanconi anemia group M protein [Sus scrofa]
Length = 2053
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 64 YLAPNAPLLPSEITA-----DLPANHRHTLYSSGQIF------------FVTPRILIVDL 106
++AP PL+ +I A +P +H + S Q+F F+TP++++ DL
Sbjct: 148 FMAPTKPLVTQQIEACYRVMGIPQSHMAEMTGSTQVFTRKEIWDSKRVLFLTPQVMVNDL 207
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A S P S
Sbjct: 208 SRGACPAAEIKCLVIDEAHRALGNYAYCQVVRELVKYTNHFRILALSATPG---SDIKAV 264
Query: 167 ERIMKSLFIRKLHLWPRFQVNV---SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDA 223
++++ +L I ++ L ++ S E E V VP+S+ + IQKA +++++A
Sbjct: 265 QQVITNLLIEQIELRSEDAPDILPYSHERRVEKLV-----VPLSEELAAIQKAYIQILEA 319
Query: 224 CLKEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 320 FAHSLIQRNVLMRRDIPNLT 339
>gi|358341274|dbj|GAA27796.2| fanconi anemia group M protein [Clonorchis sinensis]
Length = 1444
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 47/252 (18%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+ ++ HI + L + LV L +GL L+A+V++ + L P+ KS
Sbjct: 119 IRDYQFHITEQCLYK--NTLVCLPTGLG-KTLVAAVVMYN--------FLRWYPHGKSV- 166
Query: 62 IHYLAPNAPLLPSEITA-----------------DLPANHRHTLYSSGQIFFVTPRILIV 104
++AP PL+ ++TA P R L+++ + FF+TP++L+
Sbjct: 167 --FMAPTRPLVAQQLTACGRLLGLSSDTAIELTGSTPQTKRQRLWTNLRAFFLTPQVLMN 224
Query: 105 DLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSL------NREAYIRAFSDKPTA 158
DL P+++L LI H T N C++I+ L +R + A S P +
Sbjct: 225 DLQAGVCPSADLRLLIFDEAHKATGNHA---YCQVIRLLTAPPHNHRLFRVVALSATPAS 281
Query: 159 MVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE-REPPVVVDVRVPMSKYMGGIQKAI 217
+ G + I+ +L I L L V+V + R+ +V VP+ + + +
Sbjct: 282 DIQGV---QTILANLLISHLELRTDTSVDVKRYTQHRQLETIV---VPLGPELNRFRSQL 335
Query: 218 LEVMDACLKEMR 229
+E L+ +R
Sbjct: 336 IECARIPLERLR 347
>gi|363735044|ref|XP_003641500.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein
homolog [Gallus gallus]
Length = 1880
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLN 144
R L++S ++FF+TP+I++ DL P + L++ H N C+++K L+
Sbjct: 137 RRELWASRRVFFLTPQIMVNDLSRGTCPAVEVKCLVVDEAHKALGNHA---YCQVVKELS 193
Query: 145 R---EAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW----PRFQVNVSEELEREPP 197
R + + A + P S ++++ +L I ++ L P Q E
Sbjct: 194 RYTTQFRVLALTATPG---SDTKAVQQVVSNLLIAQIELCSEDSPEIQPYSHERQ----- 245
Query: 198 VVVDVRVPMSKYMGGIQKAILEVMD 222
V + VP+ + +GGIQ+A + V++
Sbjct: 246 -VEKIVVPLGEELGGIQRAYIHVLE 269
>gi|238568541|ref|XP_002386442.1| hypothetical protein MPER_15289 [Moniliophthora perniciosa FA553]
gi|215438478|gb|EEB87372.1| hypothetical protein MPER_15289 [Moniliophthora perniciosa FA553]
Length = 166
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 671 LKVYFLFYEDSTEVQKFKAGIRRENGAFESLIRQKSFMMIPI 712
++VY + Y DS E K+ AGIRRE +FE LI+++ M++PI
Sbjct: 3 VRVYHMVYSDSCEEHKYLAGIRREKDSFERLIKERGSMLLPI 44
>gi|328698487|ref|XP_001948012.2| PREDICTED: hypothetical protein LOC100166297 [Acyrthosiphon pisum]
Length = 2033
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNL 57
V E+ II L + LV L +G+ IA+V++ + P + + + P +
Sbjct: 175 VREYQMGIIKTALF--HNTLVSLPTGMG-KTFIAAVVMYNFYRWYPMGKIIFMAPTRPLV 231
Query: 58 KSQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
QI H + + E+T ++P R+ ++ ++FF+TP++L DL + P+
Sbjct: 232 AQQIEACHSIMGIPREMTFEMTGNIPPEQRYLAWNKYRVFFLTPQVLANDLSLNKCPSDT 291
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
+I+ H T++ + + + N+ I S P V A TE ++++L I
Sbjct: 292 FRCIIVDEAHRATKDYAYVQVLKRLSEENKVIRIVGLSATPGTNVE--AVTE-VIRNLNI 348
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV- 234
KL +V++ ++ + V+ ++ + I+ L + D LK +++ + +
Sbjct: 349 SKLEFRTDESPDVAKYTNKKDVECISVK--LTNTILDIRTQFLMIYDKYLKRLKQYHALN 406
Query: 235 -DVEDLT 240
+V +LT
Sbjct: 407 GNVANLT 413
>gi|431893730|gb|ELK03551.1| Fanconi anemia group M protein [Pteropus alecto]
Length = 2039
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 112 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQFHMA 170
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++S+ ++ F+TP++++ DL P + + L+I H N
Sbjct: 171 EMTGSTHAVTRKEIWSNKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 230
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + I A S P + + ++++ +L I ++ L ++ S E
Sbjct: 231 QVVRELVKYTNHFRILALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILPYSHE 287
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
+ E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 288 RQVEKLV-----VPLGEELTAIQKAYVQILEAFASSLIQRNLLMRRDIPNLT 334
>gi|340503267|gb|EGR29872.1| hypothetical protein IMG5_146930 [Ichthyophthirius multifiliis]
Length = 622
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 22/180 (12%)
Query: 62 IHYLAPNAPLLPS-----------------EITADLPANHRHTLYSSGQIFFVTPRILIV 104
I +LAP PL+ EI +LP R Y + ++FF TP+ L
Sbjct: 102 IFFLAPTRPLVSQQMECLKIFEKINQQDIIEIVGNLPTKKRKEFYQNKRVFFQTPQTLDN 161
Query: 105 DLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFA 164
DL +R NL ++ H T T I ++ L+ + A S P + F
Sbjct: 162 DLQEKRYEGDNLCLIVFDEAHKATGKYAYTNIINQLEKLHFGYRVLALSATPG---NQFE 218
Query: 165 KTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDAC 224
+ + ++K+L I KL + ++ + + ++ + V+V + + IQ+ I ++ C
Sbjct: 219 QIQEVLKNLKICKLEVKDENDEDIKKYMHKKQ--IFPVKVQNNDQINKIQENISNLIFNC 276
>gi|195058057|ref|XP_001995378.1| GH23128 [Drosophila grimshawi]
gi|193899584|gb|EDV98450.1| GH23128 [Drosophila grimshawi]
Length = 1294
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 21 LVILSSGLSLPKLIASVLL--LHS--PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV+L +GL IASV++ LH P + + + P + QI H + P LP+
Sbjct: 67 LVVLPTGLG-KTFIASVVMYNLHRWFPRSKLIFMAPTRPLVAQQIAACHKIMP----LPA 121
Query: 75 ----EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQ-------RLPTSNLAGLIILN 123
E+T LP R L+ S ++FF TP+++ D+L Q + P ++ L++
Sbjct: 122 SDVVELTGRLPRAKRAELWRSKRVFFATPQVVQSDMLEQQEQADGFQFPYEDIKLLVVDE 181
Query: 124 THALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPR 183
H T + + + N + A S P + A + ++L+I L
Sbjct: 182 AHRAKGRYAYTQVTESLMARNPHFRMLALSATPGRTMEDVAA---VCRNLYISHL----- 233
Query: 184 FQVNVSEELEREPPV----VVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
+V + ++ P V + + VP++ + ++ +L+++D L+++
Sbjct: 234 -EVRCDDSIDVRPYVHHRSLDTIVVPLADRIKEPRERLLQIIDPYLRQL 281
>gi|21752288|dbj|BAC04159.1| unnamed protein product [Homo sapiens]
Length = 669
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A+ R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILTYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVLMRRDIPNLT 330
>gi|374635020|ref|ZP_09706625.1| helicase domain protein [Methanotorris formicicus Mc-S-70]
gi|373563422|gb|EHP89616.1| helicase domain protein [Methanotorris formicicus Mc-S-70]
Length = 753
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q I+A L++ L +L +GL + A ++ + S + G +L+++ S L Q H
Sbjct: 18 YQQVIVANALKK--NTLCVLGTGLGKTAIAALTIAGILSKNDGKVLIIAPSRPLVEQ--H 73
Query: 64 YLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
Y + L E +T N R L+ G+IF TP+I+ DL+ RL +
Sbjct: 74 YNSMRNFLNIDEDKVIVLTGKTQPNKREKLWKDGKIFIATPQIVENDLIAGRLNVEDFVL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + F+
Sbjct: 134 LIADEAHHTTGNHSYAFVA 152
>gi|23273574|gb|AAH36056.1| FANCM protein [Homo sapiens]
gi|119586188|gb|EAW65784.1| Fanconi anemia, complementation group M, isoform CRA_d [Homo
sapiens]
gi|325463111|gb|ADZ15326.1| Fanconi anemia, complementation group M [synthetic construct]
Length = 669
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A+ R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILTYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVLMRRDIPNLT 330
>gi|301786799|ref|XP_002928821.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Ailuropoda melanoleuca]
Length = 2048
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ S ++ F+TP++++ DL
Sbjct: 142 FMAPTKPLVTQQIEACYRVMGIPQSHMAEMTGSTQAFIRKEIWRSKRVLFLTPQVMVNDL 201
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A S P + +
Sbjct: 202 SRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFRILALSATPGSDIKA---V 258
Query: 167 ERIMKSLFIRKLHLWPRFQVNV---SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDA 223
++++ +L I ++ L ++ S E + E V VP+ + + IQKA ++V++A
Sbjct: 259 QQVITNLRIGQIELRSEDSPDILPYSHERQVEKLV-----VPLGEELAAIQKAYIQVLEA 313
Query: 224 CLKEMRKTN---KVDVEDLT 240
+ + + N + D+ +LT
Sbjct: 314 FARSLIQRNVLMRKDIPNLT 333
>gi|118380585|ref|XP_001023456.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|89305223|gb|EAS03211.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 1858
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 4 EFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL---LHSPSQGTLLLLSSSPNLKSQ 60
E+ I+ L N LV L +GL + A+V+L L P +G + L+ + L +Q
Sbjct: 140 EYQYSIVKTCL--SNNTLVALPTGLGKTFIAATVILNYYLWFP-KGKIFFLAPTRPLVNQ 196
Query: 61 IIHYLAPNAPLLPS---EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
+ L+ + + E+T + P R +Y +IFF TP+ L DL+ QR NL+
Sbjct: 197 QMECLSQFELINKNDIFEMTGNYPIPKRRDVYLRKRIFFCTPQTLENDLIEQRYDGYNLS 256
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
+I H T I +SL I A S P + F + + ++K+L I K
Sbjct: 257 LVIFDEAHRGTGKYAYVNIVTHFESLGYGYRILALSATPG---NEFEQIQDVLKNLRISK 313
Query: 178 LHL 180
L +
Sbjct: 314 LEI 316
>gi|344273425|ref|XP_003408522.1| PREDICTED: Fanconi anemia group M protein [Loxodonta africana]
Length = 2066
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IASV++ + PS + + + P + QI Y P +
Sbjct: 111 LVCLPTGLG-KTFIASVVMYNFYRWFPSGKVVFMAPTKPLVAQQIEACYRVMGIPQSHMA 169
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ + ++ F+TP++++ DL P + + L++ H N
Sbjct: 170 EMTGSTQAFTRKDIWHNKRVLFLTPQVMVNDLSRGACPAAEIKCLVVDEAHKALGNYAYC 229
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I K+ L ++ E
Sbjct: 230 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGKIELRSEDSPDILPYSHE 286
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R VV VP+ + + IQKA +++++A + + N + D+ LT
Sbjct: 287 RRVEKVV---VPLGEELAAIQKAYIQILEAFASSLIQRNVLMRRDIPSLT 333
>gi|195344412|ref|XP_002038781.1| GM10427 [Drosophila sechellia]
gi|194133802|gb|EDW55318.1| GM10427 [Drosophila sechellia]
Length = 1593
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE-- 75
LV+L +GL IA+V++ + +G ++ ++ + L SQ IH P PSE
Sbjct: 75 LVVLPTGLG-KTFIAAVVMYNFYRWYPKGKIVFMAPTRPLVSQQIHASQKIMPF-PSEDT 132
Query: 76 --ITADLPANHRHTLYSSGQIFFVTPRILIVDLLT----QRLPTSNLAGLIILNTHALTE 129
+T LP R L++S ++FF TP+++ D+L P ++ +++ H
Sbjct: 133 VQLTGQLPRPKRAELWASKRVFFATPQVVHSDMLEADGGSSFPFGSIKLIVVDEAHRAKG 192
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
T + + + NR + A S P + A + ++L+I L + ++V
Sbjct: 193 RYAYTQVADCLMARNRHFRMLALSATPGRTMEDVAA---VCRNLYISNLQVRWDTSIDVQ 249
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
+ R + + V + + + ++ +L++++ L+++
Sbjct: 250 PYIHRR--TIRTIVVSLKERIKEPRERLLQIIEPYLRQL 286
>gi|195498547|ref|XP_002096570.1| GE25739 [Drosophila yakuba]
gi|194182671|gb|EDW96282.1| GE25739 [Drosophila yakuba]
Length = 1495
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPS-- 74
LV+L +GL IA+VL+ + P +G ++ ++ + L SQ IH P PS
Sbjct: 79 LVVLPTGLG-KTFIAAVLMFNFYRWYP-KGKIVFMAPTRPLVSQQIHASQKIMPF-PSAD 135
Query: 75 --EITADLPANHRHTLYSSGQIFFVTPRILIVDLLT----QRLPTSNLAGLIILNTHALT 128
++T LP R L+ S ++FF TP+++ D+L P ++ +++ H
Sbjct: 136 TVQLTGQLPRPKRAELWGSKRVFFATPQVVHSDMLETDGGSTFPFESIKLIVVDEAHRAK 195
Query: 129 ENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV 188
T + + + NR + A S P + A + ++L+I L + ++V
Sbjct: 196 GRYAYTQVVDCLMARNRNFRMLALSATPGRTMEDVAA---VCQNLYISNLQVRWDTSIDV 252
Query: 189 SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
+ R + + V + + + ++ +L++++ L+++ +++
Sbjct: 253 QPYIHRR--TIRTIVVSLKERIKESRERLLQIIEPYLRQLLESD 294
>gi|195569151|ref|XP_002102574.1| GD19428 [Drosophila simulans]
gi|194198501|gb|EDX12077.1| GD19428 [Drosophila simulans]
Length = 1487
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE-- 75
LV+L +GL IA+V++ + +G ++ ++ + L SQ IH P PSE
Sbjct: 75 LVVLPTGLG-KTFIAAVVMYNFYRWYPKGKIVFMAPTRPLVSQQIHASQKIMPF-PSEDT 132
Query: 76 --ITADLPANHRHTLYSSGQIFFVTPRILIVDLLT----QRLPTSNLAGLIILNTHALTE 129
+T LP R L++S ++FF TP+++ D+L P ++ +++ H
Sbjct: 133 VQLTGQLPRPKRAELWASKRVFFATPQVVHSDMLEADGGSSFPFGSIKLIVVDEAHRAKG 192
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
T + + + NR + A S P + A + ++L+I L + ++V
Sbjct: 193 RYAYTQVADCLMARNRHFRMLALSATPGRTMEDVAA---VCRNLYISNLQVRWDTSIDVQ 249
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
+ R + + V + + + ++ +L++++ L+++
Sbjct: 250 PYIHRR--TIRTIVVSLKERIKEPRERLLQIIEPYLRQL 286
>gi|260951197|ref|XP_002619895.1| hypothetical protein CLUG_01054 [Clavispora lusitaniae ATCC 42720]
gi|238847467|gb|EEQ36931.1| hypothetical protein CLUG_01054 [Clavispora lusitaniae ATCC 42720]
Length = 962
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P +S+II ++AP PL+ +I A
Sbjct: 76 LVALPTGLG-KTFIASTVMLN--------FLRWFP--RSKII-FMAPTKPLVAQQIKACC 123
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R T+++ Q+FF TP+++ DL + ++ L+I
Sbjct: 124 GITGISSSQVAILLDKTRKNRSTIWNEKQVFFTTPQVVENDLTRGIVNPKDVVLLVIDEA 183
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + + N I A + P + V G + I+ +L I K+ +
Sbjct: 184 HRARGNYAYNNVVKFLNRFNNSFRILALTATPASDVDG---VQEIIDNLCISKVEVRTER 240
Query: 185 QVNVSEELERE 195
+++ + L+R+
Sbjct: 241 SIDIFKYLKRK 251
>gi|375298275|ref|NP_001098446.2| Fanconi anemia, complementation group M [Bos taurus]
Length = 2037
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++SS ++ F+TP++++ DL P + + L+I H N
Sbjct: 173 EMTGSTQAFTRKEIWSSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 232
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + + A S P + + ++++ +L I ++ L ++ S E
Sbjct: 233 QVVRELVKYTNHFRVLALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILPYSHE 289
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 290 RRVEKLV-----VPLGEELEAIQKAYIQILEAFASSLIQRNVLMRKDIPNLT 336
>gi|358418015|ref|XP_003583812.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein [Bos
taurus]
Length = 2037
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++SS ++ F+TP++++ DL P + + L+I H N
Sbjct: 173 EMTGSTQAFTRKEIWSSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 232
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + + A S P + + ++++ +L I ++ L ++ S E
Sbjct: 233 QVVRELVKYTNHFRVLALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILPYSHE 289
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 290 RRVEKLV-----VPLGEELEAIQKAYIQILEAFASSLIQRNVLMRKDIPNLT 336
>gi|296421581|ref|XP_002840343.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636558|emb|CAZ84534.1| unnamed protein product [Tuber melanosporum]
Length = 1066
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 21 LVILSSGLSLPKLIASVLL--LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA 78
LV L +GL + A+V+L +G + L+ + L +Q I N +P TA
Sbjct: 183 LVALPTGLGKTLIAATVILNFFRWAPEGQIAFLAPTKPLVAQQIDACF-NIVGIPRSATA 241
Query: 79 DLPAN----HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
++ N R + ++FF+TP+ + D+ + L+I H T N
Sbjct: 242 EMTGNVGVQQRRDYWEEKRVFFLTPQTMQNDIARGICDAKRIVCLVIDEAHRATGNYAYV 301
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMV---------SGFAKTE-RIMKSLFIRKLHLWPRF 184
+ ++++ +N + A + P + + G A TE R ++SL IR +++ RF
Sbjct: 302 QVVKLLRRVNNSFRVLALTATPGSTIDKVQAVIDSCGIAGTEIRNLESLDIRP-YVYKRF 360
Query: 185 Q 185
Q
Sbjct: 361 Q 361
>gi|119586186|gb|EAW65782.1| Fanconi anemia, complementation group M, isoform CRA_b [Homo
sapiens]
Length = 2083
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A+ R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILTYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVLMRRDIPNLT 330
>gi|162312400|ref|NP_593348.2| ATP-dependent 3' to 5' DNA helicase [Schizosaccharomyces pombe
972h-]
gi|121919048|sp|Q9UT23.2|MFH1_SCHPO RecName: Full=ATP-dependent DNA helicase mfh1; AltName: Full=FancM
homolog protein 1
gi|85663622|emb|CAB57423.2| ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1
[Schizosaccharomyces pombe]
Length = 834
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 36/236 (15%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPL--------- 71
LV L +GL IA+V++++ L P KS I+ ++AP PL
Sbjct: 90 LVALPTGLG-KTFIAAVVMMN--------YLRWFP--KSYIV-FMAPTKPLVTQQMEACY 137
Query: 72 ----LPSEITADL----PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILN 123
+P TA+L P R+ Y S +FFVTP+ ++ D+ + ++ L+I
Sbjct: 138 KITGIPKSQTAELSGHVPVTTRNQYYQSRNVFFVTPQTILNDIKHGICDRTRISCLVIDE 197
Query: 124 THALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPR 183
H T N + ++ N+ I A S P + + ++ SL I ++ +
Sbjct: 198 AHRSTGNYAYVEVVHLLSLSNKNFRILALSATPGNKLEAI---QNVIDSLHISRIEIRTE 254
Query: 184 FQVNVSEELEREPPVVVDVR-VPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
+++S+ ++++ VD V +S + I+ +++ L+++ K N +++
Sbjct: 255 NSIDISQYVQKKE---VDFFPVDLSAEITDIRDRFSSILEPMLQKLNKGNYYRIQN 307
>gi|440908633|gb|ELR58630.1| Fanconi anemia group M protein, partial [Bos grunniens mutus]
Length = 2036
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV L +GL IA+V++ + PS + + + P + QI + + + +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGISQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++SS ++ F+TP++++ DL P + + L+I H N
Sbjct: 173 EMTGSTQAFTRKEIWSSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 232
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + + A S P + + ++++ +L I ++ L ++ S E
Sbjct: 233 QVVRELVKYTNHFRVLALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILPYSHE 289
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 290 RRVEKLV-----VPLGEELEAIQKAYIQILEAFASSLIQRNVLMRKDIPNLT 336
>gi|426248444|ref|XP_004017973.1| PREDICTED: Fanconi anemia group M protein [Ovis aries]
Length = 2043
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV L +GL IA+V++ + PS + + + P + QI + + +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIRQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 173 EMTGSTQAFTRKEIWGSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 232
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P + + ++++ +L I ++ L ++ E
Sbjct: 233 QVVRELVKYTNHFRILALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILPYSHE 289
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R +V VP+ + + IQKA +++++A + + N K D+ +LT
Sbjct: 290 RRVEKIV---VPLGEELAAIQKAYVQILEAFASSLIQRNVLMKKDIPNLT 336
>gi|296214902|ref|XP_002753903.1| PREDICTED: Fanconi anemia group M protein [Callithrix jacchus]
Length = 2043
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P + + ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKFTNHFRILALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILAYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK +++++A + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILEAFAHSLIQRNVLMRKDISNLT 330
>gi|347963300|ref|XP_310969.5| AGAP000169-PA [Anopheles gambiae str. PEST]
gi|333467265|gb|EAA06209.5| AGAP000169-PA [Anopheles gambiae str. PEST]
Length = 1326
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 43/241 (17%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLA-----PNAPL 71
LV+L +GL IA+V++ + P+ G ++ ++ + L +Q I A P A
Sbjct: 86 LVVLPTGLG-KTFIAAVVMYNLYRWYPT-GKVIFMAPTRPLVAQQIEACARVVGIPRADT 143
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDL---------------LTQRLPTSNL 116
+E+T P + R TL+ S ++FF TP++++ DL P + +
Sbjct: 144 --AEVTGRQPRSKRATLWRSRRVFFATPQVVLADLQGTDPGGGSGEGGGGGGPLFPANQV 201
Query: 117 AGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIR 176
++I H T + R++ N + A S P + A+ ++K+L I
Sbjct: 202 RLVVIDEAHKAKGRYAYTDVIRLLAETNPCFRVLALSATPGRTLEDVAE---VLKNLLIS 258
Query: 177 KLHLWPRFQVNVSEELEREPPVVV--DVR---VPMSKYMGGIQKAILEVMDACLKEMRKT 231
H+ R+ + S +L+ P V DVR +P+ + ++K +L ++D L+ + +
Sbjct: 259 --HIEVRY--DCSPDLQ---PYVFRRDVRTIVIPLGPTIARLRKELLRLVDPYLQRLLEA 311
Query: 232 N 232
N
Sbjct: 312 N 312
>gi|74959747|ref|NP_065988.1| Fanconi anemia group M protein [Homo sapiens]
gi|78099254|sp|Q8IYD8.2|FANCM_HUMAN RecName: Full=Fanconi anemia group M protein; Short=Protein FACM;
AltName: Full=ATP-dependent RNA helicase FANCM; AltName:
Full=Fanconi anemia-associated polypeptide of 250 kDa;
Short=FAAP250; AltName: Full=Protein Hef ortholog
gi|71912519|gb|AAZ53290.1| Fanconi anemia complementation group M [Homo sapiens]
gi|119586185|gb|EAW65781.1| Fanconi anemia, complementation group M, isoform CRA_a [Homo
sapiens]
gi|162319388|gb|AAI56491.1| Fanconi anemia, complementation group M [synthetic construct]
Length = 2048
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 105/230 (45%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A+ R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P + + ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILTYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVLMRRDIPNLT 330
>gi|149237126|ref|XP_001524440.1| hypothetical protein LELG_04412 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451975|gb|EDK46231.1| hypothetical protein LELG_04412 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 536
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P KS+I+ ++AP PL+ +I A
Sbjct: 150 LVALPTGLG-KTFIASTVMLN--------FLRWFP--KSKIV-FMAPTKPLVAQQIKACC 197
Query: 79 ---DLPAN-----------HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
+PA+ +R +++S Q+FF TP+++ DL + +++ L+I
Sbjct: 198 SITGIPASKVAILLDETRKNRGEIWNSRQVFFTTPQVVENDLAFGLVNPKSISLLVIDEA 257
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
H N + + +K N I A + P A V G + ++ +L I K+ +
Sbjct: 258 HRARGNYSYNNVVNFLKRFNDSFRILALTATPAADVEG---VQNVIDNLMISKVEV 310
>gi|47230040|emb|CAG10454.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1724
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLA----PNAPLL 72
LV L +GL IASV++ + PS + + + P + QI P A +
Sbjct: 167 LVCLPTGLG-KTFIASVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQAHM- 224
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A R ++ + ++FF+TP++++ DL + P + ++I H N
Sbjct: 225 -AELTGSTAAKQRQEVWRTKRVFFLTPQVMVNDLSRETCPAQQVKCVVIDEAHKALGNHA 283
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT-ERIMKSLFIRKLHL 180
+ R + S + I A S P G AK+ + ++ +L I + L
Sbjct: 284 YCQVIRQLSSQTLQFRILALSATP----GGDAKSVQSVVSNLLISHIEL 328
>gi|452209972|ref|YP_007490086.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina mazei
Tuc01]
gi|452099874|gb|AGF96814.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina mazei
Tuc01]
Length = 845
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K I ++ ++ S Q G L+LS + L Q + L E+
Sbjct: 30 LVVLPTGLG--KTIIALFVIASRLQRFGGKALILSPTKPLVEQHAAFFKKVMALPEEEVL 87
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T +P R L+ G++ TP+++ D+LT+R+ N++ + H N T
Sbjct: 88 AFTGSIPPAERERLWEQGKLIVSTPQVIENDILTRRISLENVSHITFDEAHRAVGNYAYT 147
Query: 135 FIC 137
FI
Sbjct: 148 FIA 150
>gi|134045229|ref|YP_001096715.1| Hef nuclease [Methanococcus maripaludis C5]
gi|132662854|gb|ABO34500.1| ERCC4 domain protein [Methanococcus maripaludis C5]
Length = 749
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q ++A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQLVVASALKQ--NTLCVLGTGLGKTAIAALTIAGILSKQDGKVLIIAPSRPLVDQ--H 73
Query: 64 YLAPNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ + N L + SE + + R T++ SG+IF TP++ D++++ L S +
Sbjct: 74 FKSMNQFLNIDSEKIVILNGKISPKKRETMWESGKIFIATPQVAENDIISKILKPSQFSL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + TF+
Sbjct: 134 LIADEAHHTTGNHSYTFVA 152
>gi|328874050|gb|EGG22416.1| ATP-dependent RNA helicase [Dictyostelium fasciculatum]
Length = 1558
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 4 EFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKS 59
++ +II + + LV L +GL IASVL+L+ P+ + ++ + P +
Sbjct: 315 DYQYNIIKHAIYQ--NTLVCLPTGLG-KTFIASVLMLNYYRWFPTSKIIFMVHTKPLVSQ 371
Query: 60 QIIHYL----APNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
QI + P + ++ + T + R L+ ++FF+TP IL D+ +R SN
Sbjct: 372 QIDAFYHTTGVPRSSII--QFTGTVNPTKRSELWEKKRVFFLTPHILNNDIRDKRCDPSN 429
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNR 145
++ +++ +H T+N+ C+ ++ + +
Sbjct: 430 ISLIVMDESHRATKNAA---YCQALREVTK 456
>gi|119586187|gb|EAW65783.1| Fanconi anemia, complementation group M, isoform CRA_c [Homo
sapiens]
Length = 1979
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A+ R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILTYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVLMRRDIPNLT 330
>gi|116008407|ref|NP_650971.2| CG7922, isoform A [Drosophila melanogaster]
gi|442620307|ref|NP_001262806.1| CG7922, isoform B [Drosophila melanogaster]
gi|113194811|gb|AAF55897.2| CG7922, isoform A [Drosophila melanogaster]
gi|440217713|gb|AGB96186.1| CG7922, isoform B [Drosophila melanogaster]
Length = 1489
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE-- 75
LV+L +GL IA+V++ + +G ++ ++ + L SQ IH P PSE
Sbjct: 75 LVVLPTGLG-KTFIAAVVMYNFYRWYPKGKIVFMAPTRPLVSQQIHASQKIMPF-PSEDT 132
Query: 76 --ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQ----RLPTSNLAGLIILNTHALTE 129
+T LP R L++S ++FF TP+++ D+L P ++ +++ H
Sbjct: 133 VQLTGQLPRPKRAELWASKRVFFATPQVVHSDMLEADGECSFPFGSIKLIVVDEAHRAKG 192
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVS 189
T + + + NR + A S P + A + ++L+I L + ++V
Sbjct: 193 RYAYTQVADCLMARNRYFRMLALSATPGRTMEDVAA---VCRNLYISNLQVRWDTSIDVQ 249
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
+ R + + V + + + ++ +L++++ L+++
Sbjct: 250 PYIHRR--TIRTIVVSLKERIKEPRERLLQIIEPYLRQL 286
>gi|284161344|ref|YP_003399967.1| DEAD/DEAH box helicase [Archaeoglobus profundus DSM 5631]
gi|284011341|gb|ADB57294.1| DEAD/DEAH box helicase domain protein [Archaeoglobus profundus DSM
5631]
Length = 736
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV+L +GL K + ++L++ S G L+L+ + L Q ++ + +EI
Sbjct: 33 LVVLPTGLG--KTVIALLVIASRLHNKGGKALVLAPTKPLVEQHANFFRKTLKIPSNEIV 90
Query: 78 A---DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
A ++P + R+ L++ ++ TP+++ DL++ R+ ++ + H N +
Sbjct: 91 ALSGEVPPDKRYQLWNKAKVVVSTPQVIENDLISGRISLEDVVHVTFDEAHRAVGNYSYV 150
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
FI + ++ I A + P S + E ++K+L+I
Sbjct: 151 FIAKAYMEQAKDPLILAITASPG---SDIERIEEVIKNLYI 188
>gi|73963567|ref|XP_537429.2| PREDICTED: Fanconi anemia group M protein [Canis lupus familiaris]
Length = 2047
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGTTQAFTRKEIWRSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + I A S P + + ++++ +L I ++ L ++ S E
Sbjct: 227 QVVRELFKYTNHFRILALSATPGSDIKAI---QQVITNLRIGQIELRSEDSPDILPYSHE 283
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA ++V++A + + N + D+ +LT
Sbjct: 284 RRVEKLV-----VPLGEELAAIQKAYIQVLEAFASSLIQRNILMRRDIPNLT 330
>gi|430814617|emb|CCJ28178.1| unnamed protein product [Pneumocystis jirovecii]
gi|430814620|emb|CCJ28181.1| unnamed protein product [Pneumocystis jirovecii]
Length = 882
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 16/226 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI 76
LV L +GL IA+VL+L+ P + + + P + QI N +P +
Sbjct: 119 LVSLPTGLG-KTFIAAVLMLNYYRWFPKSKIIFVAPTKPLVSQQI--QACYNICGIPLKD 175
Query: 77 TADLPANHRHTLYSSG----QIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
T +L N + L S+ ++FF+TP+ L DL + ++ L+I H T N
Sbjct: 176 TIELSGNTKPILRSAAWNEKRVFFMTPQALQNDLESGICDKKSIVCLVIDEAHRATGNYA 235
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEEL 192
+ R+I+S N+ I A + P + + ++ SL I ++ L +++ +
Sbjct: 236 YCNVVRMIRSENKSFRILALTATPGTDIDS---VQEVVNSLCIAQIELRTEDSIDIRGYI 292
Query: 193 EREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
V + +P+S+ + ++ +++ L+++ N ++D
Sbjct: 293 HNR--TVETILIPLSQELIILRDLYGDIIKPFLQKLNTANACHIQD 336
>gi|424811846|ref|ZP_18237086.1| ERCC4-like helicase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756068|gb|EGQ39651.1| ERCC4-like helicase [Candidatus Nanosalinarum sp. J07AB56]
Length = 741
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL 65
+Q +IA N LV+L +GL +I +++ G +L L+ + L Q H
Sbjct: 14 YQEVIAASASNLNT-LVVLPTGLG-KTVIGAMVAAMKGEDGKVLFLAPTKPLAQQ--HRR 69
Query: 66 APNAPLLPSEI-----TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
N L E+ T D+ + R L++ + FF TP+++ D++ ++P L+ +I
Sbjct: 70 TFNNLLTVPEVDLTLLTGDVRPDERTDLWTQKRFFFATPQVVENDIIDGKVPVEELSLVI 129
Query: 121 ILNTHALTENSTETFIC 137
H T + + FI
Sbjct: 130 FDEAHRATGSYSYNFIS 146
>gi|150402564|ref|YP_001329858.1| Hef nuclease [Methanococcus maripaludis C7]
gi|150033594|gb|ABR65707.1| ERCC4 domain protein [Methanococcus maripaludis C7]
Length = 749
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q ++A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQLVVASALKQ--NTLCVLGTGLGKTAIAALTIAGILSKQNGKVLIIAPSRPLVDQ--H 73
Query: 64 YLAPNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ + N L + SE + + R ++ SG+IF TP++ D++++ L S +
Sbjct: 74 FKSMNQFLNIDSEKIVILNGKISPKKREAMWESGKIFIATPQVAENDIISKMLKPSQFSL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + TF+
Sbjct: 134 LIADEAHHTTGNHSYTFVA 152
>gi|385301513|gb|EIF45700.1| single-stranded dna endonuclease (with rad10p) [Dekkera
bruxellensis AWRI1499]
Length = 118
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 629 YALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAE-NPSIKLKVYFLFYEDSTEVQK 686
Y +SD + + P +++Y P++SF+R+IE Y+AE S + K YF++Y S E Q+
Sbjct: 57 YNSKSDDLLXEEFMPSXVILYEPNLSFIRKIEQYQAERRKSDRAKCYFMYYGGSVEEQR 115
>gi|255729652|ref|XP_002549751.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132820|gb|EER32377.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1162
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L PN K I ++AP PL+ +I A
Sbjct: 108 LVALPTGLG-KTFIASTVMLN--------FLRWFPNSK---IIFMAPTRPLVAQQIKACC 155
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R ++ S Q+FF TP+++ DL+ + +++ L+I
Sbjct: 156 SITGIPSSKVAILLDKTRKNRAEIWDSRQVFFTTPQVVENDLVAGTVDPKSISLLVIDEA 215
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
H N + + + I A + P++ V G + I+ +L I K+ +
Sbjct: 216 HRAKGNFAYNNVVKFLDRFTFSYRILALTATPSSDVEG---VQEIINNLNISKVEV 268
>gi|344305379|gb|EGW35611.1| hypothetical protein SPAPADRAFT_48591 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1151
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P +S+II ++AP PL+ +I A
Sbjct: 103 LVALPTGLG-KTFIASTVMLN--------FLRWFP--QSKII-FMAPTRPLVAQQIKACC 150
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R ++ + Q+FF TP+++ DL L ++ L+I
Sbjct: 151 SITGIPSSKVAILLDKTRKNREEIWDTRQVFFTTPQVVENDLARGILNPKSVVLLVIDEA 210
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + + + N I A + P V G + I+ +L I K+ +
Sbjct: 211 HRARGNYSYNNVVKFLSRFNNSFRILALTATPAGDVEG---VQDIIDNLKISKVEVRTEH 267
Query: 185 QVNVSEELEREPPV--VVDVRVPMSKYMGGIQKAILEVMDAC 224
+++++ ++R+ V V+ + + +G + AI V+ +
Sbjct: 268 AIDITKYMKRKQIVKRTVNASSEIQELIGLLATAISPVLKSA 309
>gi|213405465|ref|XP_002173504.1| helicase C-terminal domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212001551|gb|EEB07211.1| helicase C-terminal domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 794
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV L +GL IA+VL+++ P + L + P + Q+ + +A +
Sbjct: 92 LVALPTGLG-KTFIAAVLMMNYLRWFPQSYVVFLAPTKPLVTQQMEACYKIAGIPKSCTA 150
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E++ +P R LY ++FF+TP+ L DL ++ L++ H N +
Sbjct: 151 ELSGQVPVATRAELYKEKKVFFLTPQTLQNDLKRGICDRMKISCLVVDEAHRSLGNYSYV 210
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
+ R+I NR + A + P + + + I+ SL I + + +++++ + +
Sbjct: 211 EVVRLIYMGNRNFRVLALTATPGSKID---TVQSIVDSLHISCIEIRNENSIDIAQYVYK 267
Query: 195 EPPVVVDVR-VPMSKYMGGIQKAILEVMDACLKEMRKTNKV---DVEDLT 240
+ VD V ++ + I+ E+++ ++ K N D++D+T
Sbjct: 268 KN---VDCYPVDLNPLLCDIRDRYCELLEPFFTKLTKGNLYWVRDIKDIT 314
>gi|159905661|ref|YP_001549323.1| Hef nuclease [Methanococcus maripaludis C6]
gi|159887154|gb|ABX02091.1| ERCC4 domain protein [Methanococcus maripaludis C6]
Length = 751
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q ++A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQLVVASALKQ--NTLCVLGTGLGKTAIAALTIAGILSKQDGKVLIIAPSRPLVDQ--H 73
Query: 64 YLAPNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ + N L + SE + + R ++ SG+IF TP++ D++++ L S +
Sbjct: 74 FKSMNQFLNIDSEKIVILNGKISPKKREAMWESGKIFIATPQVAENDIISKMLKPSQFSL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + TF+
Sbjct: 134 LIADEAHHTTGNHSYTFVA 152
>gi|260836711|ref|XP_002613349.1| hypothetical protein BRAFLDRAFT_118736 [Branchiostoma floridae]
gi|229298734|gb|EEN69358.1| hypothetical protein BRAFLDRAFT_118736 [Branchiostoma floridae]
Length = 2342
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNL 57
V E+ +I+ + L + LV L +GL IA+V++ + P + + + P +
Sbjct: 105 VREYQYNIVHQALFK--NTLVTLPTGLG-KTFIAAVVMYNFYRWYPMGKVIFMAPTKPLV 161
Query: 58 KSQIIHYLAPNAPLLP----SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
QI N +P +E+T +P + R + ++FF+TP++++ DL P
Sbjct: 162 AQQIEACF--NIMGIPQNDTAEMTGSMPPSERKRAWQEKRVFFLTPQVMVNDLSRGACPA 219
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNR---EAYIRAFSDKPTAMVSGFAKTERIM 170
++ L++ H N C++++ L + + + A S P + G ++++
Sbjct: 220 DDVKCLVVDEAHKALGNHA---FCQVVQELVKFTLQFRVLALSATPGGDLKGV---QQVL 273
Query: 171 KSLFIRKLHL 180
+L I + L
Sbjct: 274 SNLLITHVEL 283
>gi|68481063|ref|XP_715573.1| hypothetical protein CaO19.2919 [Candida albicans SC5314]
gi|74679884|sp|Q5A1A0.1|MPH1_CANAL RecName: Full=ATP-dependent DNA helicase MPH1
gi|46437201|gb|EAK96552.1| hypothetical protein CaO19.2919 [Candida albicans SC5314]
Length = 1187
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P S+II ++AP PL+ +I A
Sbjct: 154 LVALPTGLG-KTFIASTVMLN--------FLRWFP--ISKII-FMAPTRPLVAQQIKACC 201
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R +++S Q+FF TP+++ DL + + ++A L+I
Sbjct: 202 SIAGIPSSKVAILLDKTRRNRAEIWNSRQVFFTTPQVVENDLASGVVNPKSIALLVIDEA 261
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + + I + I A + P + V G ++I+ +L I K+ +
Sbjct: 262 HRAKGNYSYNNVVKFINRFSDSYRILALTATPASDVEG---VQQIIDNLNISKVEVRTEQ 318
Query: 185 QVNVSEELERE 195
+++ ++R+
Sbjct: 319 SIDIVRHMKRK 329
>gi|68480950|ref|XP_715628.1| hypothetical protein CaO19.10436 [Candida albicans SC5314]
gi|46437260|gb|EAK96610.1| hypothetical protein CaO19.10436 [Candida albicans SC5314]
Length = 1187
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P S+II ++AP PL+ +I A
Sbjct: 154 LVALPTGLG-KTFIASTVMLN--------FLRWFP--ISKII-FMAPTRPLVAQQIKACC 201
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R +++S Q+FF TP+++ DL + + ++A L+I
Sbjct: 202 SIAGIPSSKVAILLDKTRRNRAEIWNSRQVFFTTPQVVENDLASGVVNPKSIALLVIDEA 261
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + + I + I A + P + V G ++I+ +L I K+ +
Sbjct: 262 HRAKGNYSYNNVVKFINRFSDSYRILALTATPASDVEG---VQQIIDNLNISKVEVRTEQ 318
Query: 185 QVNVSEELERE 195
+++ ++R+
Sbjct: 319 SIDIVRHMKRK 329
>gi|403277961|ref|XP_003930608.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Saimiri
boliviensis boliviensis]
Length = 2047
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ S ++ F+TP++++ DL
Sbjct: 139 FMAPTKPLVTQQIEACYQVMGIPQSHMAQMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDL 198
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A S P + +
Sbjct: 199 SRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKFTNHFRILALSATPGSDIKA---V 255
Query: 167 ERIMKSLFIRKLHLWPRFQVNV-SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
++++ +L I ++ L ++ + ER+ V + VP+ + + IQK +++++A
Sbjct: 256 QQVITNLLIGQIELRSEDSPDILAYSHERK---VEKLIVPLGEELVAIQKTYIQILEAFA 312
Query: 226 KEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 313 HSLIQRNVLMRRDISNLT 330
>gi|238881270|gb|EEQ44908.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 904
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P S+II ++AP PL+ +I A
Sbjct: 154 LVALPTGLG-KTFIASTVMLN--------FLRWFP--ISKII-FMAPTRPLVAQQIKACC 201
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R +++S Q+FF TP+++ DL + + ++A L+I
Sbjct: 202 SIAGIPSSKVAILLDKTRRNRAEIWNSRQVFFTTPQVVENDLASGVVNPKSIALLVIDEA 261
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + + I + I A + P + V G ++I+ +L I K+ +
Sbjct: 262 HRAKGNYSYNNVVKFINRFSDSYRILALTATPASDVEG---VQQIIDNLNISKVEVRTEQ 318
Query: 185 QVNVSEELERE 195
+++ ++R+
Sbjct: 319 SIDIVRHMKRK 329
>gi|402218846|gb|EJT98921.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 1094
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV L +GL IA VL+L+ P + + + P + QI H P+ +
Sbjct: 113 LVALPTGLGK-TFIAGVLMLNYYRWFPDGKVVFVAPTKPLVSQQIKACHETC-GIPVEDA 170
Query: 75 -EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
E+T + P R ++S +I ++TP+ L DLL + + ++ L++ H T N
Sbjct: 171 IEMTGETPQATRQRHWASKRIVYMTPQTLQNDLLREVVDPRDIILLVVDEAHKATGNYAY 230
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
+ R + + N I A + P S + I+ SL + + + +++ + +
Sbjct: 231 ATVVRFMMAKNPHFRILALTATPG---SKPKTVQDIIDSLHVGHIEIRDERSLDLKQYIH 287
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR 229
+ + V M + GI++ +L +M+ +K +R
Sbjct: 288 EK--TMEKCVVQMGASINGIKERLLALMENTVKPLR 321
>gi|296475200|tpg|DAA17315.1| TPA: Fanconi anemia, complementation group M [Bos taurus]
Length = 348
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++SS ++ F+TP++++ DL P + + L+I H N
Sbjct: 173 EMTGSTQAFTRKEIWSSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 232
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + + A S P S ++++ +L I ++ L ++ S E
Sbjct: 233 QVVRELVKYTNHFRVLALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILPYSHE 289
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 290 RRVEKLV-----VPLGEELEAIQKAYIQILEAFASSLIQRNVLMRKDIPNLT 336
>gi|151553733|gb|AAI49287.1| FANCM protein [Bos taurus]
Length = 373
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++SS ++ F+TP++++ DL P + + L+I H N
Sbjct: 173 EMTGSTQAFTRKEIWSSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 232
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + + A S P S ++++ +L I ++ L ++ S E
Sbjct: 233 QVVRELVKYTNHFRVLALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILPYSHE 289
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 290 RRVEKLV-----VPLGEELEAIQKAYIQILEAFASSLIQRNVLMRKDIPNLT 336
>gi|340624705|ref|YP_004743158.1| Hef nuclease [Methanococcus maripaludis X1]
gi|339904973|gb|AEK20415.1| Hef nuclease [Methanococcus maripaludis X1]
Length = 755
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q ++A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQLVVASALKQ--NTLCVLGTGLGKTAIAALTIAGILSKRNGKVLIIAPSRPLVDQ--H 73
Query: 64 YLAPNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ + N L + SE + + R ++ SG+IF TP++ D++++ L S +
Sbjct: 74 FKSMNQFLNIDSEKIVILNGKISPKKREAMWESGKIFIATPQVAENDIISKILKPSQFSL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + TF+
Sbjct: 134 LIADEAHHTTGNHSYTFVA 152
>gi|109083473|ref|XP_001096802.1| PREDICTED: Fanconi anemia group M protein isoform 2 [Macaca
mulatta]
Length = 2050
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILAYSYE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ ++ VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 284 RKIEKLI---VPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 330
>gi|397523571|ref|XP_003831801.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Pan paniscus]
Length = 2048
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ S ++ F+TP++++ DL
Sbjct: 139 FMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDL 198
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A S P S
Sbjct: 199 SRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFRILALSATPG---SDIKAV 255
Query: 167 ERIMKSLFIRKLHLWPRFQVNV-SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
++++ +L I ++ L ++ + ER+ V + VP+ + + IQK ++V+++
Sbjct: 256 QQVITNLLIGQIELRSEDSPDILAYSHERK---VEKLIVPLGEELAAIQKTYIQVLESFA 312
Query: 226 KEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 313 HSLIQRNVLMRRDIPNLT 330
>gi|355778552|gb|EHH63588.1| hypothetical protein EGM_16587 [Macaca fascicularis]
Length = 2052
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILAYSYE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ ++ VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 284 RKIEKLI---VPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 330
>gi|355693246|gb|EHH27849.1| hypothetical protein EGK_18153 [Macaca mulatta]
Length = 2016
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILAYSYE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ ++ VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 284 RKIEKLI---VPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 330
>gi|402876056|ref|XP_003901798.1| PREDICTED: Fanconi anemia group M protein [Papio anubis]
Length = 1980
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILAYSYE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ ++ VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 284 RKIEKLI---VPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 330
>gi|332229232|ref|XP_003263795.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Nomascus
leucogenys]
Length = 2050
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P + + ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPGSDIKA---VQQVITNLLIGQIELRSEDSPDILAYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 330
>gi|194207332|ref|XP_001915885.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein
[Equus caballus]
Length = 2127
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI---IHYLAPNAPLLP 73
LV L +GL IA+V++ + PS + + + P + QI + P +
Sbjct: 185 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQPDM- 242
Query: 74 SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
+E+T + A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 243 AEMTGCIQAFTRKEIWRSKRVLFLTPQVMVNDLSRGSCPAAEIKCLVIDEAHKALGNYAY 302
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SE 190
+ R + I A S P S ++++ +L I ++ L ++ S
Sbjct: 303 CQVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILPYSH 359
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDL 239
E E V VP+ + + IQKA +++++ + + N + D+
Sbjct: 360 ERRVEKLV-----VPLGEELAAIQKAYIQILETFASSLIQRNVLKRRDI 403
>gi|45358958|ref|NP_988515.1| Hef nuclease [Methanococcus maripaludis S2]
gi|45047824|emb|CAF30951.1| Helix-hairpin-helix motif:DEAD/DEAH box helicase:Helicase,
C-terminal:Helix-hairpin-helix DNA-binding, class
1:ERCC4 domain [Methanococcus maripaludis S2]
Length = 752
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q ++A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQLVVASALKQ--NTLCVLGTGLGKTAIAALTIAGILSKRNGKVLIIAPSRPLVDQ--H 73
Query: 64 YLAPNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ + N L + SE + + R ++ SG+IF TP++ D++++ L S +
Sbjct: 74 FKSMNQFLNIDSEKIVILNGKISPKKREAMWESGKIFIATPQVAENDIISKILKPSQFSL 133
Query: 119 LIILNTHALTENSTETFIC 137
LI H T N + TF+
Sbjct: 134 LIADEAHHTTGNHSYTFVA 152
>gi|195380381|ref|XP_002048949.1| GJ21324 [Drosophila virilis]
gi|194143746|gb|EDW60142.1| GJ21324 [Drosophila virilis]
Length = 1366
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 17/242 (7%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPN 56
+ L +QH I + N LV+L +GL IASV++ + P + + + P
Sbjct: 57 LPLRSYQHSIVQAALYRNT-LVVLPTGLG-KTFIASVVMYNLYRWYPKSKLIFMAPTRPL 114
Query: 57 LKSQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLT----QR 110
+ QI + P E+T LP R L+ S ++FF TP+++ D+L +
Sbjct: 115 VSQQIAACQKIMPFPAEDTVELTGRLPRAKRAELWLSKRVFFATPQVVQSDMLDTGDGMQ 174
Query: 111 LPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIM 170
P ++ L++ H T + I + N + A S P + A +
Sbjct: 175 FPYMSIKLLVVDEAHRAKGRYAYTQVTESIMARNPYFRMLALSATPGRTMDDVAA---VC 231
Query: 171 KSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
++L+I L + ++V + + + + + VP+ + + +LE++D L+++
Sbjct: 232 RNLYISHLEVRWEDSIDVRQYVHKR--SMRTIVVPLKDRIKEPRARLLEIIDPYLRQLIA 289
Query: 231 TN 232
N
Sbjct: 290 AN 291
>gi|410962305|ref|XP_003987713.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein
[Felis catus]
Length = 2051
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 111 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 169
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 170 EMTGSTQALTRKEIWRSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 229
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + I A S P + + ++++ +L I ++ L ++ S E
Sbjct: 230 QVVRELVKYTDHFRILALSATPGSDIKA---VQQVITNLRIGQIELRSEDSPDILPYSHE 286
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA ++V++A + + N + D+ +LT
Sbjct: 287 RRVEKLV-----VPLGEELVAIQKAYIQVLEAFASSLIQRNVLMRRDIPNLT 333
>gi|426376787|ref|XP_004055167.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Gorilla
gorilla gorilla]
Length = 2048
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ S ++ F+TP++++ DL
Sbjct: 139 FMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDL 198
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A S P S
Sbjct: 199 SRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFRILALSATPG---SDIKAV 255
Query: 167 ERIMKSLFIRKLHLWPRFQVNV-SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
++++ +L I ++ L ++ + ER+ V + VP+ + + IQK ++++++
Sbjct: 256 QQVITNLLIGQIELRSEDSPDILAYSHERK---VEKLIVPLGEELAAIQKTYIQILESFA 312
Query: 226 KEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 313 HSLIQRNVLMRRDIPNLT 330
>gi|357616345|gb|EHJ70142.1| hypothetical protein KGM_06170 [Danaus plexippus]
Length = 1703
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 39/335 (11%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNL 57
+ ++ +II + E LV L +GL IA+V++ + P + + + P +
Sbjct: 86 IRDYQFNIIKAAMVE--NCLVSLPTGLG-KTFIAAVIMYNFYRWYPLGKVIFMAPTKPLV 142
Query: 58 KSQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
QI + + P E+T + N R + + + ++FF TP+++ D+ + P+
Sbjct: 143 AQQIEACYNIVAMPPKDTIEMTGHMQVNTRKSHWQTKRVFFATPQVIYNDIKSGTCPSDK 202
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAY----IRAFSDKPTAMVSGFAKTERIMK 171
+ L+I H N + IIK+L Y + A S P V I+K
Sbjct: 203 IKCLVIDEAHKAKGNYAYS---SIIKTLTEMGYFIYRVLALSATPGNKVEDVI---HIVK 256
Query: 172 SLFIRKLHLWPRFQVNV-SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
L I +L L +V + R VV V + + +++ +E++D +++ K
Sbjct: 257 HLHISRLELRTENCSDVKAYSHARNINTVV---VELGPELTKLREQYVEILDGYTRKLTK 313
Query: 231 TNKVDVEDL-TVENG----LFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYL 285
N +++L + G L+K F R P + + + + L TL L+ L
Sbjct: 314 FNI--IQNLGNLSKGRIVMLYKEFQNRERGARHPQHSYIMR----IFTLLITLYHGLELL 367
Query: 286 VRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIF 320
V++ + +L + D E W+ ++ F
Sbjct: 368 VKHGSRVFLNFFD-----EHPEKTWVHEDNELTAF 397
>gi|297695020|ref|XP_002824758.1| PREDICTED: Fanconi anemia group M protein [Pongo abelii]
Length = 1967
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 167 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 227 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILAYSHE 283
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 284 RK---VEKLIVPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 330
>gi|393247997|gb|EJD55504.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1053
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 129/295 (43%), Gaps = 26/295 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV L +GL IASV++L+ P+ + + + P + QI H + +
Sbjct: 38 LVALPTGLGK-TFIASVIMLNYWRWFPTGKIIFMCPTKPLVAQQITACHEVCGIPGTDAA 96
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+ ++ + R L+ ++F++TP+ L DL ++ L ++ L++ H T
Sbjct: 97 ELHGEISKDKRARLWEQKRVFYMTPQTLDNDLQSENLDVRDIVLLVVDEAHRATGEYAYA 156
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELER 194
R I + N I A + P+ S K + I+ +L I + + ++ +++
Sbjct: 157 TAIRRITARNPHFRILALTATPS---SDKEKMQPIIDALHISHIEIRSEASPDILPYIKK 213
Query: 195 EPPVVVDVRVP--MSKYMGGIQKAILEVMDACLK-EMRKTNKVDVEDLTVENGLFKSFDE 251
+ +++P ++K G+ K +L ++ E+R T ++ L + KS +
Sbjct: 214 KERKEYIIQMPPHLAKLRDGMAKIMLPILKQFKNGEIRGT----LDPLYIRPFTLKSALD 269
Query: 252 ILR--RQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE 304
LR +Q P W +++L L + Y + Y L++L+ R++E
Sbjct: 270 ALRSSKQSPPPW------VYSNLANLHALSGAMGYFLEYSPKLALEHLEA-RLAE 317
>gi|241954988|ref|XP_002420215.1| ATP-dependent RNA helicase, helicase; DEAD box helicase, putative
[Candida dubliniensis CD36]
gi|223643556|emb|CAX42438.1| ATP-dependent RNA helicase, helicase [Candida dubliniensis CD36]
Length = 1132
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P S+II ++AP PL+ +I A
Sbjct: 107 LVALPTGLG-KTFIASTVMLN--------FLRWFP--ISKII-FMAPTRPLVAQQIKACC 154
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R +++S Q+FF TP+++ DL + + ++A L+I
Sbjct: 155 SIAGIPSSKVAILLDKTRRNRAEIWNSRQVFFTTPQVVENDLASGVVNPKSIALLVIDEA 214
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + + I + I A + P + V G ++I+ +L I K+ +
Sbjct: 215 HRAKGNYSYNNVVKFINRFSDSYRILALTATPASDVEG---VQQIIDNLNISKVEVRTEQ 271
Query: 185 QVNVSEELERE 195
+++ ++++
Sbjct: 272 SIDIVRHMKKK 282
>gi|403415510|emb|CCM02210.1| predicted protein [Fibroporia radiculosa]
Length = 1363
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLKSQII---HYLAPNAPLLPS 74
LV L +GL IA V++L+ S +G ++ L+ S L +Q I H +
Sbjct: 253 LVALPTGLGK-TFIAGVVMLNFYSWFPEGKVIFLAPSKPLVAQQIEACHQTCGIPGAQAA 311
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T + P + R L++ ++F++TP+ L+ DL++ ++ ++I H T +
Sbjct: 312 ELTGETPKSKRLKLWAEKRVFYMTPQTLLSDLISANCDPRDIILIVIDEAHKGTGDYAYA 371
Query: 135 FICRIIKSLNREAYIRAFSDKP 156
+ R + + N + A + P
Sbjct: 372 QVIRFMMAKNPHFRVLALTATP 393
>gi|344228143|gb|EGV60029.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 1038
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 18 NGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
N LV L +GL + A+++L + PN K I ++AP PL+ +I
Sbjct: 147 NNMLVALPTGLGKTFIAATIILNY---------WRWFPNSK---IIFMAPTRPLVAQQIK 194
Query: 78 A---------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL 122
A D +R +++S +IFF TP+++ DL + +++ L++
Sbjct: 195 ACFNIIGLKDQSAVLLDKTKRNRLEIWNSFRIFFTTPQVVENDLCNGLVDPKSVSLLVVD 254
Query: 123 NTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
H N + + + N I A + P++ V G + I+ +L I K+ +
Sbjct: 255 EAHKAKGNYAYNNVAKFLDRFNNSYRILALTATPSSTVEGI---KEIVGNLTINKIEI 309
>gi|114652855|ref|XP_509928.2| PREDICTED: Fanconi anemia group M protein isoform 2 [Pan
troglodytes]
Length = 2048
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ S ++ F+TP++++ DL
Sbjct: 139 FMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDL 198
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A + P S
Sbjct: 199 SRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFRILALTATPG---SDIKAV 255
Query: 167 ERIMKSLFIRKLHLWPRFQVNV-SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
++++ +L I ++ L ++ + ER+ V + VP+ + + IQK ++V+++
Sbjct: 256 QQVITNLLIGQIELRSENSPDILAYSHERK---VEKLIVPLGEELAAIQKTYIQVLESFA 312
Query: 226 KEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 313 HSLIQRNVLMRRDIPNLT 330
>gi|195124341|ref|XP_002006652.1| GI18468 [Drosophila mojavensis]
gi|193911720|gb|EDW10587.1| GI18468 [Drosophila mojavensis]
Length = 1373
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 1 MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL--LHS--PSQGTLLLLSSSPN 56
+ L +QH I + N LV+L +GL IA+V++ LH P + + + P
Sbjct: 56 LPLRSYQHSIVQAALYRNT-LVVLPTGLG-KTFIAAVVMYNLHRWYPESKLIFMAPTRPL 113
Query: 57 LKSQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQ----R 110
+ QI + P P E+T LP R L+++ ++FF TP+++ D+L +
Sbjct: 114 VAQQIAACQKIMPFCPEDTVELTGRLPRAKRAELWATKRVFFATPQVVQSDMLDTGDGLQ 173
Query: 111 LPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIM 170
P ++ L++ H T + + + N + A S P + A +
Sbjct: 174 FPYMSIKLLVVDEAHRAKGRYAYTQVTDSLMARNPYFRMLALSATPGRTMEDVAA---VC 230
Query: 171 KSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRK 230
++L I L + ++V + + + + + VP++ + + +L+++D L+++
Sbjct: 231 RNLCISHLEVRWDDSIDVRQYVHKR--SMRTIVVPLNDRIKEPRAELLQIIDPYLRQLIT 288
Query: 231 TN 232
N
Sbjct: 289 AN 290
>gi|410339047|gb|JAA38470.1| Fanconi anemia, complementation group M [Pan troglodytes]
Length = 2048
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ S ++ F+TP++++ DL
Sbjct: 139 FMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDL 198
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + + L+I H N + R + I A + P S
Sbjct: 199 SRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFRILALTATPG---SDIKAV 255
Query: 167 ERIMKSLFIRKLHLWPRFQVNV-SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
++++ +L I ++ L ++ + ER+ V + VP+ + + IQK ++V+++
Sbjct: 256 QQVITNLLIGQIELRSEDSPDILAYSHERK---VEKLIVPLGEELAAIQKTYIQVLESFA 312
Query: 226 KEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 313 HSLIQRNVLMRRDIPNLT 330
>gi|345306292|ref|XP_003428451.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M
protein-like, partial [Ornithorhynchus anatinus]
Length = 2081
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
+LAP PL+ + A +PA H R +++S ++ F+TP++++ DL
Sbjct: 74 FLAPTKPLVAQQRLACARLMAIPARHMALLTGSTQALTRKEIWTSKRVLFLTPQVMVNDL 133
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + L++ H N + R + + A S P S
Sbjct: 134 SRGTCPAVTVKCLVVDEAHRALGNHAYCQVVRELTKYTTHFRVLALSATPG---SDTKSV 190
Query: 167 ERIMKSLFIRKLHLWPRFQVN-VSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACL 225
++++ +L I ++ L + + ER V + VP+ + + IQ A ++V++A
Sbjct: 191 QQVVSNLLIGQIELRSEDSPDIIPYSHERR---VEKLVVPLGEDLAAIQDAYIQVLEAFA 247
Query: 226 KEMRKTN---KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 248 SPLIRMNVLTRRDISNLT 265
>gi|268325930|emb|CBH39518.1| putative ATP-dependent RNA helicase [uncultured archaeon]
Length = 780
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI---T 77
+V+L +GL IA +L++ ++G +L L+ + L Q +L + PS I T
Sbjct: 39 MVVLPTGLG-KTTIALFVLINRLAKGKVLFLAPTRPLVEQHSAFLNDVLNIDPSVIQTLT 97
Query: 78 ADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFIC 137
++ A+ R L+ +I TP+I+ DLL+ R+ S ++ +I H N + +I
Sbjct: 98 GNVLADKRAKLWDDAKIIVSTPQIIENDLLSNRINLSAVSLIIFDECHRAVGNYSYVYIA 157
>gi|357152779|ref|XP_003576233.1| PREDICTED: uncharacterized protein LOC100835661 [Brachypodium
distachyon]
Length = 1395
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 20/252 (7%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLK 58
V E+ Q+I+ + L LV L +GL IA+V++ + +G ++ + S L
Sbjct: 165 VREYQQYIVQKALF--TNTLVALPTGLG-KTFIAAVVMYNYFRWFPEGKIVFTAPSRPLV 221
Query: 59 SQIIHYLAPNAPLLPSEITADLPAN----HRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
+Q I N +P E D+ N R + + S ++FFVTP+IL D+ +
Sbjct: 222 TQQIEACH-NTVGIPQEWAIDMKGNLSPEKRTSFWKSKRVFFVTPQILENDIRSGICMVK 280
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
L L+I H + N + R + + N I A + P S + ++ +L
Sbjct: 281 QLVCLVIDEAHRASGNHSYCSAVRELVASNVPLRILALTATPG---SKHPDIQGVINNLH 337
Query: 175 IRKL----HLWPRFQVNVSEELEREPPVVVDV--RVPMSKYMGGIQKAILEVMDACLKEM 228
I +L P Q V+ V ++ VP+ I + +LE++ + ++
Sbjct: 338 ISELIHRDESDPEVQRYVNTRTVDLVKVCMNCGKSVPVGSDTAQINEMLLEIIRPHIAQL 397
Query: 229 RKTNKVDVEDLT 240
R +D D +
Sbjct: 398 RAAGVIDNRDAS 409
>gi|21227489|ref|NP_633411.1| Hef nuclease [Methanosarcina mazei Go1]
gi|20905864|gb|AAM31083.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina mazei
Go1]
Length = 864
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K I ++ ++ S Q G L+LS + L Q + L E+
Sbjct: 42 LVVLPTGLG--KTIIALFVIASRLQRFGGKALILSPTKPLVEQHAAFFKKVMALPEEEVL 99
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T + R L+ G++ TP+++ D+LT+R+ N++ + H N T
Sbjct: 100 AFTGSISPAERERLWEQGKLIVSTPQVIENDILTRRISLENVSHITFDEAHRAVGNYAYT 159
Query: 135 FIC 137
FI
Sbjct: 160 FIA 162
>gi|62734194|gb|AAX96303.1| Similar to probable ATP-dependent RNA helicase - fission yeast
(Schizosaccharomyces pombe) [Oryza sativa Japonica
Group]
gi|77548994|gb|ABA91791.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
Length = 1488
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 18/233 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL IA+V++ + +G ++ + + L +Q I N +P E T
Sbjct: 265 LVALPTGLG-KTFIAAVVMYNYFRWFPEGKIVFTAPTRPLVTQQIEACH-NTVGIPQEWT 322
Query: 78 ADLPAN----HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
DL N R + S ++FFVTP++L D+ + + L L+I H + N
Sbjct: 323 IDLKGNLSPSKRSCFWKSKRVFFVTPQVLQNDIQSGICMVNQLVCLVIDEAHRASRNYAY 382
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
+ R +++ I A + P + + ++ +L I +L VS ++
Sbjct: 383 CVVVRELEAARVPLRILALTATPGSKQPAI---QNVINNLRISELVHCDESDPEVSRYIQ 439
Query: 194 R---EPPVVV---DVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLT 240
R EP V D +P+ + +L+V+ L ++R +D D +
Sbjct: 440 RRTVEPLEVCMDSDKFIPVGDEAEQVNDKLLDVIRPHLVKLRSARVIDHRDAS 492
>gi|424814351|ref|ZP_18239529.1| ERCC4-like helicase [Candidatus Nanosalina sp. J07AB43]
gi|339757967|gb|EGQ43224.1| ERCC4-like helicase [Candidatus Nanosalina sp. J07AB43]
Length = 730
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYL 65
+Q +IA + N LV+L +GL + V + +L+++ + L SQ H
Sbjct: 14 YQEVIAASASDRNT-LVVLPTGLGKTIIAVMVASIKMKENQKVLMMAPTKPLASQ--HCQ 70
Query: 66 APNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L +PS+ +T D R+ L+ + FF TP+++ DL++ +P N + +I
Sbjct: 71 TFREFLNVPSDQLKVMTGDTRPEERYDLWKDRKGFFATPQVVENDLISGEVPVQNFSLVI 130
Query: 121 ILNTHALTENSTETFI 136
H T + + FI
Sbjct: 131 FDEAHRATGDYSYVFI 146
>gi|194745250|ref|XP_001955101.1| GF18603 [Drosophila ananassae]
gi|190628138|gb|EDV43662.1| GF18603 [Drosophila ananassae]
Length = 1475
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQI 61
+ Q I+ L + LV+L +GL IA+V++ + QG ++ ++ + L +Q
Sbjct: 65 YQQAIVQSALYK--NTLVVLPTGLG-KTFIAAVVMYNFYRWYPQGKIVFMAPTRPLVAQQ 121
Query: 62 IHY---LAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQR----LPTS 114
I+ + P A ++T L R L+ S ++FFVTP+++ D+L P S
Sbjct: 122 INASQKIMPFAAADTVQLTGQLARPKRAQLWESKRVFFVTPQVVHSDMLEAEGGATFPFS 181
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
++ +++ H T + + + NR + A S P + A + ++LF
Sbjct: 182 SVKLVVVDEAHRAKGRYAYTQVADSMMAHNRNFRMLALSATPGRTMDDVAT---VCQNLF 238
Query: 175 IRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
I L + ++V + R + + V + + ++ +L++++ L+++
Sbjct: 239 ISNLQVRWDTSIDVQPYIHRR--TIRTIVVSIKDRIKEPREQLLQIIEPYLRQL 290
>gi|449504631|ref|XP_002200489.2| PREDICTED: Fanconi anemia group M protein [Taeniopygia guttata]
Length = 1594
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 29/236 (12%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQIIHYLA-----PNAPL 71
LV L +GL +A+V++ + PS G +L L+ + L +Q + P +
Sbjct: 81 LVCLPTGLGK-TFVAAVVMYNFYRWFPS-GKVLFLAPTKPLVAQQMEACGRVMGIPARDM 138
Query: 72 LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENS 131
+E+T A R L+++ ++FF+TP+I++ DL P + L+I H N
Sbjct: 139 --AEMTGGTQALGRRELWNTKRVFFLTPQIMVNDLSRGTCPAVEIKCLVIDEAHKALGNH 196
Query: 132 TETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLW----PRFQVN 187
+ R + + + A S P S ++++ +L I ++ + P Q
Sbjct: 197 AYCQVVRELSKYTDQFRVLALSATPG---SDTKAVQQVISNLLIAQIEVCAEDSPEIQPY 253
Query: 188 VSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKT---NKVDVEDLT 240
E V + VP+ + + IQ ++V++A + K ++ D+ +LT
Sbjct: 254 SHERQ------VEKIVVPLGEELVEIQNTYIKVLEAFAGRLIKVGVLSRRDIPNLT 303
>gi|380803877|gb|AFE73814.1| Fanconi anemia group M protein, partial [Macaca mulatta]
Length = 359
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 24 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 82
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++ S ++ F+TP++++ DL P + + L+I H N
Sbjct: 83 EMTGSTQAFTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYC 142
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
+ R + I A S P S ++++ +L I ++ L ++ + E
Sbjct: 143 QVVRELVKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSPDILAYSYE 199
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ + + VP+ + + IQK ++++++ + + N + D+ +LT
Sbjct: 200 RK---IEKLIVPLGEELAAIQKTYIQILESFAHSLIQRNVLMRRDIPNLT 246
>gi|345566720|gb|EGX49662.1| hypothetical protein AOL_s00078g151 [Arthrobotrys oligospora ATCC
24927]
Length = 1021
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 28/147 (19%)
Query: 58 KSQIIHYLAPNAPLLPSEI-----------------TADLPANHRHTLYSSGQIFFVTPR 100
+SQII ++AP PL+ ++ T + HR ++ ++FF+TP+
Sbjct: 187 ESQII-FMAPTKPLVAQQVDACHKIVGIPKSDTCLLTGHVSPGHRADYWNEKRLFFLTPQ 245
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
L DL + R + +++ H T + R I+ N + A + P + V
Sbjct: 246 TLETDLTSGRCDPKRIVLIVVDEAHRATGEYAYCKVIRYIRRFNNSFRVMALTATPGSKV 305
Query: 161 S---------GFAKTE-RIMKSLFIRK 177
G A+TE R +S+ IR+
Sbjct: 306 ESVQAVITSLGIARTEIRTEESIDIRQ 332
>gi|154150356|ref|YP_001403974.1| Hef nuclease [Methanoregula boonei 6A8]
gi|153998908|gb|ABS55331.1| helicase domain protein [Methanoregula boonei 6A8]
Length = 745
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 21 LVILSSGL---SLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIH----YLAPNAPLLP 73
+VIL +GL ++ L+A+ L + G +L+L+ + L Q + YL +P P
Sbjct: 33 MVILPTGLGKTAIALLVAASRLYNE--GGKVLMLAPTKPLVEQHLRFFEKYLIAKSPTAP 90
Query: 74 -----SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALT 128
+ T + P R + Q+ F TP+++ DL+ R ++A LI+ H
Sbjct: 91 DACQFAMFTGEAPPTERTAEWERSQVIFATPQVVKNDLIAGRYTLQDVALLIVDECHRAV 150
Query: 129 ENSTETFICR 138
N F+ R
Sbjct: 151 GNYAYVFLAR 160
>gi|66820945|ref|XP_644014.1| hypothetical protein DDB_G0274841 [Dictyostelium discoideum AX4]
gi|60472360|gb|EAL70313.1| hypothetical protein DDB_G0274841 [Dictyostelium discoideum AX4]
Length = 1789
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 21 LVILSSGLSLPKLIASVLLL---HSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPS--- 74
++ L +GL IAS+L+L H + L+ L + +L SQ I + + S
Sbjct: 490 MICLPTGLG-KTFIASILMLNYYHWFPKSKLVFLVHTKSLVSQQIEAFHRDTGIPKSDSI 548
Query: 75 EITADLPAN-HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
+ T D + R +L++S ++FF TP+IL D+ + ++ ++I H N
Sbjct: 549 QFTGDTTSKLKRQSLWNSKRVFFSTPQILANDIGSGNCDPRSICCIVIDEAHRAQGNYDY 608
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
++I +NR + A + P S A ++++ +L I + L
Sbjct: 609 CVAIKLILKVNRFFRVLALTATPG---SNNAAIQKVINNLLISNMEL 652
>gi|91772921|ref|YP_565613.1| Hef nuclease [Methanococcoides burtonii DSM 6242]
gi|91711936|gb|ABE51863.1| Hef helicase [Methanococcoides burtonii DSM 6242]
Length = 769
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K I ++L++ S Q G L+LS + L Q +L + EI
Sbjct: 45 LVVLPTGLG--KTIVALLVIASRLQKTGGKALILSPTKPLVEQHAAFLRSTLNIPEDEIL 102
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T + + R L+ G++ TP+++ D+LT+R+ ++ + H N T
Sbjct: 103 TFTGAVAPDKREELWKKGKVIISTPQVIENDILTKRISLEDVTHITFDEAHRAVGNYAYT 162
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+I ++ + A + P S K + +L+IR + +
Sbjct: 163 YIAERYFEDAKKPHCLAITASPG---SSDEKISEVCTNLYIRSVAI 205
>gi|6322192|ref|NP_012267.1| Mph1p [Saccharomyces cerevisiae S288c]
gi|731905|sp|P40562.1|MPH1_YEAST RecName: Full=ATP-dependent DNA helicase MPH1; AltName:
Full=Mutator phenotype protein 1
gi|557851|emb|CAA86204.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190406221|gb|EDV09488.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|259147261|emb|CAY80514.1| Mph1p [Saccharomyces cerevisiae EC1118]
gi|285812649|tpg|DAA08548.1| TPA: Mph1p [Saccharomyces cerevisiae S288c]
gi|346228213|gb|AEO21090.1| MPH1 [synthetic construct]
gi|392298724|gb|EIW09820.1| Mph1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 993
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T +S T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDIVCLVIDEAHRATGSSAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLDISKIEI 264
>gi|256274143|gb|EEU09053.1| Mph1p [Saccharomyces cerevisiae JAY291]
Length = 993
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T +S T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDIVCLVIDEAHRATGSSAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLDISKIEI 264
>gi|20088995|ref|NP_615070.1| Hef nuclease [Methanosarcina acetivorans C2A]
gi|19913848|gb|AAM03550.1| helicase [Methanosarcina acetivorans C2A]
Length = 821
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K I ++ ++ S Q G L+LS + L Q + L EI
Sbjct: 30 LVVLPTGLG--KTIIALFVIASRLQRFGGKALILSPTKPLVDQHAAFFKKVMALPEEEIL 87
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T + R L++ G++ TP+++ DLLT+R+ +++ + H N T
Sbjct: 88 AFTGSIAPAEREKLWAQGKLIVSTPQVIENDLLTKRISLEDVSHITFDEAHRAVGNYAYT 147
Query: 135 FIC 137
FI
Sbjct: 148 FIA 150
>gi|218185362|gb|EEC67789.1| hypothetical protein OsI_35346 [Oryza sativa Indica Group]
Length = 648
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 18/231 (7%)
Query: 21 LVILSSGLSLPKLIASVLL---LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL IA+V++ +G ++ + + L +Q I N +P E T
Sbjct: 187 LVALPTGLG-KTFIAAVVMYNYFRWFPEGKIVFTAPTRPLVTQQIE-ACHNTVGIPQEWT 244
Query: 78 ADLPAN----HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
DL N R + S ++FFVTP++L D+ + + L L+I H + N
Sbjct: 245 IDLKGNLSPSKRSCFWKSKRVFFVTPQVLQNDIQSGICMVNQLVCLVIDEAHRASRNYAY 304
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
+ R +++ I A + P S + ++ +L I +L VS ++
Sbjct: 305 CVVVRELEAARVPLRILALTATPG---SKQPAIQNVINNLRISELVHCDESDPEVSRYIQ 361
Query: 194 R---EPPVVV---DVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
R EP V D +P+ + +L+V+ L ++R +D D
Sbjct: 362 RRTVEPLEVCMDSDKFIPVGDEAEQVNDKLLDVIRPHLVKLRSARVIDHRD 412
>gi|207344252|gb|EDZ71457.1| YIR002Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 993
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T +S T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDIVCLVIDEAHRATGSSAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLDISKIEI 264
>gi|354547651|emb|CCE44386.1| hypothetical protein CPAR2_401880 [Candida parapsilosis]
Length = 1048
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P+ K I ++AP PL+ +I A
Sbjct: 136 LVALPTGLG-KTFIASTVMLN--------FLRWFPSSK---IIFMAPTKPLVAQQIKACC 183
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
+ +R +++S Q+FF TP+++ DL + + ++ L+I
Sbjct: 184 SITGISSSKVAILLEKTKKNREEIWNSRQVFFTTPQVVENDLASGVVNPKSIVLLVIDEA 243
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + ++ N A + P A V G + ++ +L I K+ +
Sbjct: 244 HRARGNYSYNNVVNFLRRFNDSFRTLALTATPAADVDG---VQDVIDNLKISKVEVRTEQ 300
Query: 185 QVNVSEELEREPPV--VVDVRVPMSKYMGGIQKAILEVM 221
+++ + ++R+ +D + + + + KAI ++
Sbjct: 301 SIDIIKYMKRKKICRRTLDTSMEIRNCVALLSKAIAPIL 339
>gi|410670654|ref|YP_006923025.1| Hef nuclease [Methanolobus psychrophilus R15]
gi|409169782|gb|AFV23657.1| Hef nuclease [Methanolobus psychrophilus R15]
Length = 759
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHS---PSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE-- 75
LV+L +GL K I ++L++ S + G +LLLS + L Q +L L+P E
Sbjct: 42 LVVLPTGLG--KTIIALLVIASRLEKAGGKVLLLSPTKPLVEQHASFLK-KVLLIPEEEI 98
Query: 76 --ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
T R L+ G++ TP+++ D+LT+R+ ++ + H T N
Sbjct: 99 LVFTGSTSPAKRTELWDKGRVIVSTPQVIENDVLTKRISLEDVTHITFDEAHRATGNYAY 158
Query: 134 TFICR 138
T+I +
Sbjct: 159 TYIAQ 163
>gi|323333071|gb|EGA74472.1| Mph1p [Saccharomyces cerevisiae AWRI796]
Length = 957
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T +S T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDIVCLVIDEAHRATGSSAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLDISKIEI 264
>gi|150400569|ref|YP_001324335.1| Hef nuclease [Methanococcus aeolicus Nankai-3]
gi|150013272|gb|ABR55723.1| DEAD/DEAH box helicase domain protein [Methanococcus aeolicus
Nankai-3]
Length = 808
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKL----IASVL--LLHSPSQGTLLLLSSSPNLK 58
+ Q ++A L++ L +L +GL + IA +L + +L+++ S L
Sbjct: 18 YQQTMVANALRK--NTLCVLGTGLGKTAIATLTIAGILSKNNNKNINKKVLIIAPSRPLV 75
Query: 59 SQIIHYLAPNAPL-LPSE----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPT 113
Q HY + L +P + +T + R ++ G+IF TP+I+ D++ R+ T
Sbjct: 76 EQ--HYNSLKTFLNIPEDKIVVLTGKIAPAKRQKIWEEGKIFIATPQIVENDIVANRVNT 133
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
+ A LI H T N + +F+ + ++ +++I + P S K + K+L
Sbjct: 134 DDFALLIADEAHHTTGNHSYSFVASVFRN---KSHILGLTASPG---SNIEKILEVCKNL 187
Query: 174 FIRKLHLWPRFQVNVSE 190
I + + ++V E
Sbjct: 188 GIEHVEIRTIDDIDVKE 204
>gi|353238211|emb|CCA70164.1| related to probable RNA helicase MPH1 [Piriformospora indica DSM
11827]
Length = 1197
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T P + R L+ + ++F++TP+ L+ DL Q + ++ L++ H T + T
Sbjct: 294 ELTGQTPRDVRQVLWKTKRVFYMTPQTLVNDLANQLVDPKHIILLVVDEAHKGTGDYAYT 353
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE- 193
I R + + N + A + P + I+ S+ I + + ++V + +
Sbjct: 354 QIVRFMMATNPFFRLLALTATPGGKPEA---VQVIVDSMHISHIEIRNEESMDVRQYMHH 410
Query: 194 ---REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR 229
RE VV D + I++ +L+VMD L +R
Sbjct: 411 KTIREHVVVFDGE------LLKIRELLLKVMDRVLGPLR 443
>gi|281202162|gb|EFA76367.1| hypothetical protein PPL_10132 [Polysphondylium pallidum PN500]
Length = 1441
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI 76
LV L +GL IASV++L+ P + ++ S P + Q+ + + L I
Sbjct: 294 LVCLPTGLG-KTFIASVVMLNFYRWFPKSKIIFMVHSRPLVTQQMSAFHSITGVKLSDSI 352
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T ++ R L+ ++FF+TP+IL D+ R SN++ +++ H T +
Sbjct: 353 QLTGNVKPEARTKLWQDKRVFFITPQILDKDIEAGRCDPSNISLVVVDEAHKATGDFAYC 412
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+I R I A + P + ++++ +L I + +
Sbjct: 413 TSIHLIAKYTRYFRILALTASPGSKRDA---VQKVLSNLLISNMDI 455
>gi|222615621|gb|EEE51753.1| hypothetical protein OsJ_33185 [Oryza sativa Japonica Group]
Length = 726
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 18/231 (7%)
Query: 21 LVILSSGLSLPKLIASVLL---LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL IA+V++ +G ++ + + L +Q I N +P E T
Sbjct: 265 LVALPTGLG-KTFIAAVVMYNYFRWFPEGKIVFTAPTRPLVTQQIE-ACHNTVGIPQEWT 322
Query: 78 ADLPAN----HRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
DL N R + S ++FFVTP++L D+ + + L L+I H + N
Sbjct: 323 IDLKGNLSPSKRSCFWKSKRVFFVTPQVLQNDIQSGICMVNQLVCLVIDEAHRASRNYAY 382
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELE 193
+ R +++ I A + P S + ++ +L I +L VS ++
Sbjct: 383 CVVVRELEAARVPLRILALTATPG---SKQPAIQNVINNLRISELVHCDESDPEVSRYIQ 439
Query: 194 R---EPPVVV---DVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVED 238
R EP V D +P+ + +L+V+ L ++R +D D
Sbjct: 440 RRTVEPLEVCMDSDKFIPVGDEAEQVNDKLLDVIRPHLVKLRSARVIDHRD 490
>gi|452825107|gb|EME32106.1| ATP-dependent RNA helicase-like protein [Galdieria sulphuraria]
Length = 1137
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIH-YLAPNAPL-LPS 74
LV L +GL IA+V++ + P + + + P ++ QI Y P+ +
Sbjct: 256 LVCLPTGLG-KTFIAAVVMYNFLRWYPDGKVVFMAPTKPLVRQQIAACYRVVGIPIESTA 314
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
EIT + R T++ S +FFVTP+++ D+ P S + ++ H T +
Sbjct: 315 EITGAMKTEVRKTMWKSKNVFFVTPQVMKNDIDHGICPASKVICVVFDEAHKAT---GKY 371
Query: 135 FICRIIKSLNREA----YIRAFSDKPTAMVS 161
C +++ LN+ I A S P +S
Sbjct: 372 VYCSLVEDLNKATGGSYRILALSATPGNTIS 402
>gi|326921331|ref|XP_003206914.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Meleagris gallopavo]
Length = 1864
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 80 LPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRI 139
+ A +R L+++ ++FF+TP+I++ DL P + L+I H N C++
Sbjct: 1 MQALNRRELWATRRVFFLTPQIMVNDLSRGTCPAVEIKCLVIDEAHKALGNHA---YCQV 57
Query: 140 IKSLNREAYIRAFSDKP-TAMVSGFAKTERIMKSLFIR 176
+K L+R Y + F TA K R +K F+R
Sbjct: 58 VKELSR--YTKQFRXLALTATPGSDTKVRREIKEGFLR 93
>gi|256810024|ref|YP_003127393.1| Hef nuclease [Methanocaldococcus fervens AG86]
gi|256793224|gb|ACV23893.1| ERCC4 domain protein [Methanocaldococcus fervens AG86]
Length = 767
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 38/272 (13%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKL----IASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+ Q I A L++ L +LS+GL + IA +L + G +L+L+ S L Q
Sbjct: 18 YQQIIAANALKKKT--LCVLSTGLGKTAIAILVIAGIL---TKKDGKVLILAPSRPLVEQ 72
Query: 61 IIHYLAPNAPL---LPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLA 117
+ L + + +T + N R LY G+IF TP+++ D++ R+ +
Sbjct: 73 HCNRLKDVLNIDENMIIALTGKISPNKRAELYKKGKIFVATPQVIENDIIAGRINIDDFV 132
Query: 118 GLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRK 177
LI H T + F+ + K + ++ + P S K I ++L I
Sbjct: 133 LLIADEAHHTTGDHAYAFVAKKFKD---KCHVLGLTASPG---SDIDKVMEICENLGIE- 185
Query: 178 LHLWPRFQVNVSEELEREPPVVVDVRV-PMSKYMGGIQKAILEVMDACLKEMRK------ 230
H+ R +E+ E P V V++ P+ + K L++++ LKE K
Sbjct: 186 -HVEVR-----TEDDEDVKPYVAKVKLTPIRIELPPEFKKALKLINEALKERLKILKDFG 239
Query: 231 -----TNKVDVEDLTVENGLFKSFDEILRRQL 257
N E + + N LF S+DE ++ +L
Sbjct: 240 VINSIANVTKTELIELNNKLF-SYDEEVKYEL 270
>gi|395646185|ref|ZP_10434045.1| helicase domain-containing protein [Methanofollis liminatans DSM
4140]
gi|395442925|gb|EJG07682.1| helicase domain-containing protein [Methanofollis liminatans DSM
4140]
Length = 738
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 31/240 (12%)
Query: 21 LVILSSGL--SLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE--- 75
+V+L +GL + LI + L+ G LL+L+ + L Q + Y + L P E
Sbjct: 33 MVVLPTGLGKTAVALITAASRLYREG-GRLLVLAPTKPLVEQHLRYFSERLAL-PDEGTC 90
Query: 76 --ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
T D + R ++ + F TP+++ DL+ R +++ +++ H N
Sbjct: 91 AIFTGDTGPDERTAMWEGARAIFATPQVIKNDLIAGRYTLADVTLMVVDECHRAVGNYAY 150
Query: 134 TFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH--------LWPRF- 184
F+ R + + A + P K E +M +L I + + P
Sbjct: 151 VFLARRYHQTADKPLLLAMTASPGG---DHGKVEEVMANLGIEGVETRTESDPDVIPYVH 207
Query: 185 -------QVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVE 237
QV++ E+L V D+ + + + +++A D M+ NK++ E
Sbjct: 208 EREVEHRQVDLPEDL---ALAVGDINILIDSRLAALKRAGFFAPDRSKLSMKALNKINAE 264
>gi|384498802|gb|EIE89293.1| hypothetical protein RO3G_14004 [Rhizopus delemar RA 99-880]
Length = 1138
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 18 NGGLVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPL 71
+ LV L +GL IA+V++ + P+ + + + P + QI Y+
Sbjct: 75 HNTLVALPTGLG-KTFIAAVVMYNYWRWFPNSKIIFMAPTRPLVDQQIEACFYICG---- 129
Query: 72 LPSEITADL-----PANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHA 126
LP T D+ PA R L+ + ++FF TP+ + D+++ P + +++ H
Sbjct: 130 LPQSDTCDMTGSTTPAARRE-LWKTKRVFFATPQTIQKDIISNACPVEKVVCIVVDEAHK 188
Query: 127 LTENSTETFICRIIKSLNREAYIRAFSDKP 156
T N T + R I ++ + A + P
Sbjct: 189 ATGNYAYTDVVRRISKKQQDFRVLALTATP 218
>gi|308198038|ref|XP_001387028.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149389001|gb|EAZ63005.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 941
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P +S++I ++AP PL+ +I A
Sbjct: 41 LVALPTGLG-KTFIASTVMLN--------FLRWFP--ESKMI-FVAPTKPLVAQQIKACC 88
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R ++ Q+FF TP+++ DL + + +A L+I
Sbjct: 89 SITGIPSSKVAILLDKTRKNRGEIWDEKQVFFTTPQVVENDLASGLVDPKTIALLVIDEA 148
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N I + + I A + P + V G + I+ +L I K+ +
Sbjct: 149 HRAKGNYAYNNIVKFMDRFTNSYRILALTATPASDVDG---VQEIIDNLNISKVEVRSEE 205
Query: 185 QVNVSEELERE 195
+++ + ++R+
Sbjct: 206 SIDIIKYMKRK 216
>gi|164604840|dbj|BAF98472.1| cytochrome P450 [Coptis japonica var. dissecta]
Length = 534
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 221 MDACLKEMRK-TNKVDVEDLTVENGLFKSFDEILRRQLDPIW---HILGKKTKQLVSDLK 276
MDACLK++ + + K E+ V + K F +I + I HI G KT++ ++ ++
Sbjct: 167 MDACLKKLYELSTKRKDENAGVLVDMSKWFGDISFNVVTRIVAGKHIFGPKTERYMNVME 226
Query: 277 TLRKLLDYLVRYDAVTYLKYLDTLRVSES 305
R+L+D +V D + YL +LD LR +S
Sbjct: 227 EARRLMDVMVFSDVIPYLGWLDRLRGVDS 255
>gi|395838642|ref|XP_003792221.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Otolemur
garnettii]
Length = 2045
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 30/199 (15%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P +H R ++ + ++ F+TP++++ DL
Sbjct: 139 FMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQALTRKEIWCNKRVLFLTPQVMVNDL 198
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + L+I H N + R + I A + P S
Sbjct: 199 SRGVCPAVEIKCLVIDEAHKALGNYAYCQVVRELLKYTNHFRILALTATPG---SDIKAV 255
Query: 167 ERIMKSLFIRKLHLWPRFQVNV---SEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDA 223
++++ +L I ++ L ++ S E E V VP+ + + IQK ++V++A
Sbjct: 256 QQVITNLLIGQIELRSEDSPDILPYSHERRVEKLV-----VPLGEELAAIQKTYVQVLEA 310
Query: 224 CLKEMRKTN--KVDVEDLT 240
+ + N + D+ +LT
Sbjct: 311 FASSLIQRNVLRRDIPNLT 329
>gi|359077950|ref|XP_003587635.1| PREDICTED: Fanconi anemia group M protein [Bos taurus]
Length = 2011
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 47/232 (20%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 114 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMA 172
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A R ++SS ++ F+TP++++ DL P + + L+I H
Sbjct: 173 EMTGSTQAFTRKEIWSSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAH--------- 223
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
K+L AY +A ++++ +L I ++ L ++ S E
Sbjct: 224 ------KALGNYAYCQA--------------VQQVITNLLIGQIELRSEDSPDILPYSHE 263
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQKA +++++A + + N + D+ +LT
Sbjct: 264 RRVEKLV-----VPLGEELEAIQKAYIQILEAFASSLIQRNVLMRKDIPNLT 310
>gi|15669699|ref|NP_248512.1| Hef nuclease [Methanocaldococcus jannaschii DSM 2661]
gi|3915469|sp|Q58900.2|Y1505_METJA RecName: Full=Putative ATP-dependent RNA helicase MJ1505
gi|2826423|gb|AAB99518.1| ATP dependent RNA helicase, putative [Methanocaldococcus jannaschii
DSM 2661]
Length = 778
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 42/274 (15%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKL----IASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+ Q I A L++ L +LS+GL + IA +L + G +L+L+ S L Q
Sbjct: 18 YQQIIAANALKKKT--LCVLSTGLGKTAIAILVIAGIL---TKKDGKVLILAPSRPLVEQ 72
Query: 61 IIHYLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
HY L E +T + R LY G+IF TP+++ D++ R+
Sbjct: 73 --HYNRLKQVLNIDEDKIIALTGKIQPKKRAELYKKGKIFIATPQVIENDIIAGRINVDE 130
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
LI H T + F+ K + +I + P S K I ++L I
Sbjct: 131 FILLIADEAHHTTGDHAYAFVA---KKFKDKCHILGLTASPG---SDIDKVMEICENLGI 184
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVR-VPMSKYMGGIQKAILEVMDACLKEMRKTNK- 233
H+ R +E+ E P + V+ +P+ + K L++++ LKE K K
Sbjct: 185 E--HVEVR-----TEDDEDVKPYIAKVKLIPIRIDLPNEFKRALKLINEALKERLKILKD 237
Query: 234 -------VDV---EDLTVENGLFKSFDEILRRQL 257
DV E + + N LF S+DE ++ +L
Sbjct: 238 AGVINSIADVTKTELIELNNKLF-SYDEEVKYEL 270
>gi|242804208|ref|XP_002484328.1| DEAD box helicase Mph1, putative [Talaromyces stipitatus ATCC
10500]
gi|218717673|gb|EED17094.1| DEAD box helicase Mph1, putative [Talaromyces stipitatus ATCC
10500]
Length = 1101
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 59 SQIIHYLAPNAPLLPSEITA-----------------DLPANHRHTLYSSGQIFFVTPRI 101
+QI+ + AP PL+ ++TA ++P R + + ++FF+TP+
Sbjct: 320 AQIV-FTAPTKPLVSQQVTACLGIAGIPRSHTTLLTGNIPPGTRAEEWQTKRVFFMTPQT 378
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
LI DL T + L++ H T + + ++ N+ + A + P + V
Sbjct: 379 LINDLKTGIADPKRIVLLVVDEAHRATGGYAYVEVVKFLRRFNQSFRVLALTATPGSTVE 438
Query: 162 GFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRV-PMSKYMGGIQKAILEV 220
+ ++ L I ++ + +++ E + VDV+ S+ M + E
Sbjct: 439 AV---QAVIDGLDISRVEIRTEQSLDIREYVHAR---NVDVQTFTNSEEMTLCMDLMTEA 492
Query: 221 MDACLKEMRKTN 232
+ C+ ++R N
Sbjct: 493 LQPCVDQLRNMN 504
>gi|2127880|pir||H64487 eIF-4A family probable ATP-dependent RNA helicase homolog -
Methanococcus jannaschii
Length = 784
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 42/274 (15%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKL----IASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+ Q I A L++ L +LS+GL + IA +L + G +L+L+ S L Q
Sbjct: 24 YQQIIAANALKKKT--LCVLSTGLGKTAIAILVIAGIL---TKKDGKVLILAPSRPLVEQ 78
Query: 61 IIHYLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
HY L E +T + R LY G+IF TP+++ D++ R+
Sbjct: 79 --HYNRLKQVLNIDEDKIIALTGKIQPKKRAELYKKGKIFIATPQVIENDIIAGRINVDE 136
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
LI H T + F+ K + +I + P S K I ++L I
Sbjct: 137 FILLIADEAHHTTGDHAYAFVA---KKFKDKCHILGLTASPG---SDIDKVMEICENLGI 190
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVR-VPMSKYMGGIQKAILEVMDACLKEMRKTNK- 233
H+ R +E+ E P + V+ +P+ + K L++++ LKE K K
Sbjct: 191 E--HVEVR-----TEDDEDVKPYIAKVKLIPIRIDLPNEFKRALKLINEALKERLKILKD 243
Query: 234 -------VDV---EDLTVENGLFKSFDEILRRQL 257
DV E + + N LF S+DE ++ +L
Sbjct: 244 AGVINSIADVTKTELIELNNKLF-SYDEEVKYEL 276
>gi|284018161|sp|A3GH78.3|MPH1_PICST RecName: Full=ATP-dependent DNA helicase MPH1
Length = 1050
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P +S++I ++AP PL+ +I A
Sbjct: 105 LVALPTGLG-KTFIASTVMLN--------FLRWFP--ESKMI-FVAPTKPLVAQQIKACC 152
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
D +R ++ Q+FF TP+++ DL + + +A L+I
Sbjct: 153 SITGIPSSKVAILLDKTRKNRGEIWDEKQVFFTTPQVVENDLASGLVDPKTIALLVIDEA 212
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N I + + I A + P + V G + I+ +L I K+ +
Sbjct: 213 HRAKGNYAYNNIVKFMDRFTNSYRILALTATPASDVDG---VQEIIDNLNISKVEVRSEE 269
Query: 185 QVNVSEELERE 195
+++ + ++R+
Sbjct: 270 SIDIIKYMKRK 280
>gi|443700613|gb|ELT99493.1| hypothetical protein CAPTEDRAFT_222339 [Capitella teleta]
Length = 1565
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 21 LVILSSGLSLPKLIASVLL----LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLP--- 73
+V+L +GL +A+V++ L P QG ++ ++ + L +Q I N +P
Sbjct: 127 MVVLPTGLG-KTFVAAVVMYNFYLWYP-QGKIVFMAPTKPLVAQQIEACY-NVMGIPQSD 183
Query: 74 -SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T + R ++ +IFF+TP+++ DL P++ + L++ H N
Sbjct: 184 MAEMTGAMQPKERVKMWRLKRIFFLTPQVMTNDLGRGACPSAQIKCLVVDEAHKALGNHA 243
Query: 133 ETFICRIIKSLNREAY---IRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
C+++ L++ + + A S P S ++++KSL I + L
Sbjct: 244 ---YCQVVSELSKVSVHFRVLALSATPG---SDIKAVQQVLKSLLISHIEL 288
>gi|73668740|ref|YP_304755.1| Hef nuclease [Methanosarcina barkeri str. Fusaro]
gi|72395902|gb|AAZ70175.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina barkeri
str. Fusaro]
Length = 938
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI- 76
LV+L +GL K I ++ ++ S Q G L+LS + L Q + L +I
Sbjct: 42 LVVLPTGLG--KTIIALFVIVSRLQRFGGKALVLSPTKPLVEQHAAFFKKVMALPEDKIL 99
Query: 77 --TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
T + R L++ G++ TP+++ DLLT+R+ ++ + H N T
Sbjct: 100 TFTGSIAPAEREKLWAQGELIVSTPQVIENDLLTKRISLEDVTHITFDEAHRAVGNYAYT 159
Query: 135 FIC 137
FI
Sbjct: 160 FIA 162
>gi|350419133|ref|XP_003492081.1| PREDICTED: hypothetical protein LOC100743989 [Bombus impatiens]
Length = 1330
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 16/222 (7%)
Query: 19 GGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPS 74
LV L +GL IA+V++ + P + L + P + QI + N +PS
Sbjct: 49 NTLVCLPTGLG-KTFIAAVVMYNFWRWYPCGKVVFLAPTKPLVAQQI--FACHNTMGIPS 105
Query: 75 ----EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTEN 130
E+T + R +S ++ F TP++ DL +P+ + ++I H
Sbjct: 106 IETIELTGAVNHKQREIAWSKKRVIFATPQVFHNDLDKNVVPSDLVKCVVIDEAHKALGK 165
Query: 131 STETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE 190
+ RI+ N+ + A S P + ++++L I + L +++
Sbjct: 166 HSYCECIRILNEKNQTFRVLALSATPGNKIDN---VHEVLQNLLIAHVELRDETSLDIIP 222
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
+ + + + VP++K + ++ + +MD +K + + N
Sbjct: 223 YINKRKVDI--ILVPLNKKLAEYKERYIFIMDRHVKILLQHN 262
>gi|351710100|gb|EHB13019.1| Fanconi anemia group M protein [Heterocephalus glaber]
Length = 1664
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 22/211 (10%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQIIHYLA----PNAPLL 72
LV L +GL IA+V++ + PS + + + P + QI P A +
Sbjct: 109 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQAHM- 166
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+E+T A R ++ S ++ F+TP++++ DL P +++ L++ H N
Sbjct: 167 -AEMTGSTQAFTRKEIWLSKRVLFLTPQVMVNDLTRGACPAADIKCLVVDEAHKALGNYA 225
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---S 189
+ R + I A S P S ++++ +L I ++ L ++ S
Sbjct: 226 YCQVVRELIKYTNHFRILALSATPG---SDIKAVQQVITNLLIGQIELRSEDSADILPYS 282
Query: 190 EELEREPPVVVDVRVPMSKYMGGIQKAILEV 220
E E + VP+ + + IQK ++
Sbjct: 283 HERRVEKLI-----VPLGEELAAIQKTYIQA 308
>gi|261403123|ref|YP_003247347.1| Hef nuclease [Methanocaldococcus vulcanius M7]
gi|261370116|gb|ACX72865.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius
M7]
Length = 783
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKL----IASVLLLHSPSQGTLLLLSSSPNLKSQI 61
+Q IIA N L +LS+GL + IA +L + G +L+L+ S L Q
Sbjct: 18 YQQIIAGNALNKNT-LCVLSTGLGKTAIAILVIAGIL---TKKDGKVLILAPSRPLVEQ- 72
Query: 62 IHYLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNL 116
HY L E +T + R LY G+IF TP+++ D++ R+
Sbjct: 73 -HYKKLKDVLNIDEDKIIALTGKISPKKREDLYKKGKIFIATPQVIENDIIAGRINIDEF 131
Query: 117 AGLIILNTHALTENSTETFICR 138
LI H T + + F+ +
Sbjct: 132 ILLIADEAHHTTGDHSYAFVAK 153
>gi|336476206|ref|YP_004615347.1| helicase domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929587|gb|AEH60128.1| helicase domain protein [Methanosalsum zhilinae DSM 4017]
Length = 776
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 31/271 (11%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQ---GTLLLLSSSPNLKSQI 61
+ ++ E L++P+ LV+L +GL K I +++++ + + G +LLLS + L Q
Sbjct: 24 YQLNLAGEALKKPS--LVVLPTGLG--KTIVALMVMVARLEKYGGRILLLSPTKPLVEQH 79
Query: 62 IHYLAPNAPLLPSEI---TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+L + S I T L R L++ GQI TP+++ DL+ +R+ +++
Sbjct: 80 SLFLRNVLEIEESSILTFTGSLSPAKRAELWNQGQIIISTPQVIENDLIARRIDLGDVSH 139
Query: 119 LIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ H N +FI +I A + P S K ++ +SL I +
Sbjct: 140 ITFDEAHRAVGNYAYSFISEKYFQSCENPHILAITASPG---SSSEKVNQVCESLRIESV 196
Query: 179 HLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM---------- 228
+ +V + ++ V V +P + I++ + +MD K++
Sbjct: 197 IVKTEQDSDVVPYIHKKDIEWVHVNLP--DELKKIKELLERIMDDRFKKLAEAGYPVSNP 254
Query: 229 RKTNKVDVEDLTVENGLFKSFDEILRRQLDP 259
RKT+K ++ G+ K LR DP
Sbjct: 255 RKTSKTEIL------GMQKRLQSQLRGYPDP 279
>gi|348572365|ref|XP_003471963.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
[Cavia porcellus]
Length = 2029
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 21/232 (9%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQTQMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T R ++ + ++ F+TP++++ DL P +++ L+I H N
Sbjct: 167 EMTGSTQVFTRKEIWCNKRVLFLTPQVMVNDLTRGTCPAADIKCLVIDEAHKALGNYAYC 226
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV---SEE 191
+ R + I A + P S ++++ +L I ++ L ++ S E
Sbjct: 227 QVVRELVKYTNHFRILALTATPG---SDIKAVQQVISNLLIGQIELRSEDSPDILPYSHE 283
Query: 192 LEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
E V VP+ + + IQK +++++A + N + D+ +LT
Sbjct: 284 RRVEKLV-----VPLGEELIAIQKMYIQILEAFASPLIHRNVLMRRDISNLT 330
>gi|320033351|gb|EFW15299.1| ATP-dependent DNA helicase MPH1 [Coccidioides posadasii str.
Silveira]
Length = 1104
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 21 LVILSSGLSLPKLIASVLL--LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE--- 75
LV L +GL + A+V+L H ++ ++ + L SQ + A + S+
Sbjct: 335 LVALPTGLGKTFIAATVMLNWFHWTKDAQIVFVAPTKPLVSQQVDACFHIAGIPRSQTTL 394
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
+T + P R + S ++FF+TP+ ++ DL T + L++ H T
Sbjct: 395 LTGNTPPGVRAEEWRSKRVFFMTPQTIVNDLKTGIADPKRIVLLVVDEAHRATGAYAYVE 454
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
I + ++ N + A + P A V + ++ L I ++ +
Sbjct: 455 IVKFLQRFNNSFRVLALTATPGATVEA---VQEVIDGLSISRIEI 496
>gi|303323073|ref|XP_003071528.1| DEAD/DEAH box helicase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111230|gb|EER29383.1| DEAD/DEAH box helicase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1104
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 21 LVILSSGLSLPKLIASVLL--LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE--- 75
LV L +GL + A+V+L H ++ ++ + L SQ + A + S+
Sbjct: 335 LVALPTGLGKTFIAATVMLNWFHWTKDAQIVFVAPTKPLVSQQVDACFHIAGIPRSQTTL 394
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
+T + P R + S ++FF+TP+ ++ DL T + L++ H T
Sbjct: 395 LTGNTPPGVRAEEWRSKRVFFMTPQTIVNDLKTGIADPKRIVLLVVDEAHRATGAYAYVE 454
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
I + ++ N + A + P A V + ++ L I ++ +
Sbjct: 455 IVKFLQRFNNSFRVLALTATPGATVEA---VQEVIDGLSISRIEI 496
>gi|401842847|gb|EJT44883.1| MPH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 992
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 2 VLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNL 57
V E+ +I+ + L E L + +G+ IAS ++L+ + + + P +
Sbjct: 87 VREYQYNIVYKSLFE--NTLCAIPTGMG-KTFIASTVMLNYFRWTKKAKIIFTAPTRPLV 143
Query: 58 KSQIIHYLAPNAPLLPSEITA---DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114
QI L +PS+ TA D +R +++S ++FF TP+++ DL L
Sbjct: 144 AQQIKACLGITG--IPSDQTAILLDKSRKNREDIWASKRVFFATPQVVENDLKRGVLDPK 201
Query: 115 NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174
++ L+I H T + T + I N + A + P + + G + ++ +L
Sbjct: 202 DIVCLVIDEAHRATGSYAYTNVVNFIDRFNSSYRLLALTATPASDLEG---VQEVVNNLG 258
Query: 175 IRKLHL 180
I ++ +
Sbjct: 259 ISRIEI 264
>gi|238578294|ref|XP_002388670.1| hypothetical protein MPER_12283 [Moniliophthora perniciosa FA553]
gi|215450159|gb|EEB89600.1| hypothetical protein MPER_12283 [Moniliophthora perniciosa FA553]
Length = 133
Score = 41.2 bits (95), Expect = 2.0, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 23/83 (27%)
Query: 200 VDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEILRRQLDP 259
V++ ++ MG I AI+ M+ L ++R+ + LDP
Sbjct: 65 VEIAQKLTGCMGEIHGAIVHCMNMILTDLRRV-----------------------KDLDP 101
Query: 260 IWHILGKKTKQLVSDLKTLRKLL 282
+WH +G TK LV DL LR+L+
Sbjct: 102 VWHKVGPITKSLVRDLGVLRRLV 124
>gi|395504025|ref|XP_003756361.1| PREDICTED: Fanconi anemia group M protein, partial [Sarcophilus
harrisii]
Length = 1871
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 42/219 (19%)
Query: 64 YLAPNAPLLPSEITA-----DLPANH------------RHTLYSSGQIFFVTPRILIVDL 106
++AP PL+ +I A +P H R ++ + ++ F+TP+++I DL
Sbjct: 153 FMAPTKPLVAQQIEACSRVMGIPQRHMAEMTGSTQAFARKEIWHNKRVLFLTPQVMINDL 212
Query: 107 LTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKT 166
P + L+I H N + R + + I A S P S
Sbjct: 213 SRGACPAVKIKCLVIDEAHKALGNYAYCQVVRELVKYTKHFRILALSATPG---SDTKAV 269
Query: 167 ERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVR-----VPMSKYMGGIQKAILEVM 221
++++ +L I ++ L SE+ P + R VP+ + + +Q ++V+
Sbjct: 270 QQVVSNLLIGQIELR-------SEDSSDILPFTHERRIEKIVVPLGEELVTVQNTYIQVL 322
Query: 222 DACLKEMRKTN---KVDVEDLTVENGLFKSFDEILRRQL 257
+A + + N + D+ +LT F IL R L
Sbjct: 323 EAFASRLMRVNVLMRKDIPNLT-------KFQIILARDL 354
>gi|393226114|gb|EJD33934.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 574
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQIIHYLAPNAPLLP--- 73
LV L +GL IA V++L+ P+ + L + P + QI+ N +P
Sbjct: 38 LVALPTGLG-KTFIAGVVMLNYWRWFPTGKIIFLCPTKPLVAQQIV--ACHNTCGIPGSD 94
Query: 74 -SEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIIL--NTHALTEN 130
+E+ ++ R L+ ++F++TP+ L DL + + ++ ++I+ H T
Sbjct: 95 ATEMHGEILKVKRAHLWEQKRVFYMTPQTLKNDLTAEIMDLRDIVLMVIVPDEAHKATGA 154
Query: 131 STETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE 190
T R I N I A + P+ S K + I+ +L I + + +++S
Sbjct: 155 HAYTTTVRDITEKNPACRILALTATPS---SDKDKIQPIIDALRIGHIEIRNETSLDISP 211
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMR 229
++R+ + +R P ++ ++ ++ +M + LK +R
Sbjct: 212 YIKRKEKREIVIRFP--PHLASLRDSLANIMLSMLKLLR 248
>gi|289192001|ref|YP_003457942.1| helicase domain protein [Methanocaldococcus sp. FS406-22]
gi|288938451|gb|ADC69206.1| helicase domain protein [Methanocaldococcus sp. FS406-22]
Length = 783
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 42/274 (15%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKL----IASVLLLHSPSQGTLLLLSSSPNLKSQ 60
+ Q I A L++ L +LS+GL + IA +L + G +L+L+ S L Q
Sbjct: 18 YQQIIAANALKKKT--LCVLSTGLGKTAIAILVIAGIL---TKKDGKILILAPSRPLVEQ 72
Query: 61 IIHYLAPNAPLLPSE-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSN 115
HY L E +T + R LY G+IF TP+++ D++ R+
Sbjct: 73 --HYNRLKEVLNIDEDKIIALTGKIQPKKRVELYKKGKIFIATPQVIENDIIAGRINIDE 130
Query: 116 LAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
LI H T + F+ K + ++ + P S + I ++L I
Sbjct: 131 FVLLIADEAHHTTGDHAYAFVA---KKFKDKCHVLGLTASPG---SDIDRVMEICENLGI 184
Query: 176 RKLHLWPRFQVNVSEELEREPPVVVDVRV-PMSKYMGGIQKAILEVMDACLKEMRK---- 230
H+ R +E+ E P + V++ P+ + K L++++ LKE K
Sbjct: 185 E--HVEVR-----TEDDEDVKPYIAKVKLTPIRIDLPDEFKRALKLINEALKERLKILKD 237
Query: 231 -------TNKVDVEDLTVENGLFKSFDEILRRQL 257
+N E + + N LF S+DE ++ +L
Sbjct: 238 AGVIDSISNTTKTELIELNNKLF-SYDEEVKYEL 270
>gi|19114536|ref|NP_593624.1| ATP-dependent 3' to 5' DNA helicase (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698622|sp|Q9HE09.1|MFH2_SCHPO RecName: Full=Putative ATP-dependent RNA helicase mfh2; AltName:
Full=FancM homolog protein 2
gi|12038920|emb|CAC19734.1| ATP-dependent 3' to 5' DNA helicase (predicted)
[Schizosaccharomyces pombe]
Length = 783
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQIIHY--LAPNAPLLPS 74
L+ L +GL IA+V++L+ P + L + P L Q + +A +P +
Sbjct: 128 LLALPTGLG-KTFIAAVVMLNYFRWFPESKIIFLAPTKPLLLQQRVACSNVAGMSPGATA 186
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+ ++ + R Y++ ++FF+TP+ L DL L ++ LI H T N +
Sbjct: 187 ELNGEVSPDRRLFEYNTKRVFFMTPQTLQNDLKEHLLDAKSIICLIFDEAHRATGNHSYA 246
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKL 178
+ R + N + + P S A ++++ L I KL
Sbjct: 247 QVMRAVLRSNSHFRVLGLTATPG---SSTASVQKVVDCLHISKL 287
>gi|392597186|gb|EIW86508.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1287
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQIIHYLAPNAPLLPS--- 74
LV L +GL IA V++L+ +G ++ ++ + L +Q I + S
Sbjct: 234 LVALPTGLGK-TFIAGVVMLNYYRWFPEGKVVFVAPTKPLVAQQIDACHKTCGIPGSDAV 292
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T + P +R ++ + ++F++TP+ L+ DL++ ++ L++ H T +
Sbjct: 293 ELTGNNPRPYRSQMWETKRVFYMTPQTLLNDLISDNCDPGSIVLLVVDEAHKGTGDYAYA 352
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ R + + N + A + P S + I+ SL I ++ +
Sbjct: 353 QVVRYLMAKNPHFRVLALTATPG---SNPEAVQAIVDSLHISRIEI 395
>gi|170516811|gb|ACB15213.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group
II euryarchaeote DeepAnt-15E7]
Length = 596
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 45 QGTLLLLSSSPNLKSQ----IIHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPR 100
+G +L+++ + L Q I L+ +A + P +T P R TL+ S ++ TP+
Sbjct: 59 RGWVLMIAPTVALVEQHLRGIKSVLSDSASVNPISVTGQNPVAKRATLWGSSRLVIATPQ 118
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
++ D+ L S+ + L++ H T N + + S E + A + P
Sbjct: 119 VVRNDVTRGVLDLSDCSLLVVDEAHHATGNHAMAQVGDMYLSQTSEPLVLATTASPG--- 175
Query: 161 SGFAKTERIMKSLFIRKLHLWPRFQVNVSEELEREPPVVVDVRVP 205
S + E I L I ++HL V++ L V VRVP
Sbjct: 176 SKNNQVEEICNRLGIGRIHLKTGADAMVAQHLAGLEIQEVKVRVP 220
>gi|187954507|gb|AAI40777.1| FANCM protein [Homo sapiens]
gi|219518301|gb|AAI44512.1| FANCM protein [Homo sapiens]
Length = 2022
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 43/230 (18%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI-IHYLAPNAPLLP-S 74
LV L +GL IA+V++ + PS + + + P + QI Y P +
Sbjct: 108 LVCLPTGLG-KTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMA 166
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTET 134
E+T A+ R ++ S ++ F+TP++++ DL P + + L+I H
Sbjct: 167 EMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAH--------- 217
Query: 135 FICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNV-SEELE 193
K+L AY +A ++++ +L I ++ L ++ + E
Sbjct: 218 ------KALGNYAYCQA--------------VQQVITNLLIGQIELRSEDSPDILTYSHE 257
Query: 194 REPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN---KVDVEDLT 240
R+ V + VP+ + + IQK ++++++ + + + N + D+ +LT
Sbjct: 258 RK---VEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVLMRRDIPNLT 304
>gi|378728821|gb|EHY55280.1| fanconi anemia group M protein [Exophiala dermatitidis NIH/UT8656]
Length = 1143
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 21 LVILSSGLSLPKLIASVLL--LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE--- 75
LV L +GL + A+++L ++ ++ + L SQ + A + S+
Sbjct: 275 LVALPTGLGKTFIAATIMLNWFRWTENAQMVFVAPTKPLVSQQVDACFHIAGIPRSQTTM 334
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
+T ++P R + ++FF+TP+ LI DL + +++ H T N
Sbjct: 335 LTGEVPPAIRAEEWQEKRVFFMTPQTLINDLKNGMCDPKKIVLIVVDEAHKATGNYAYVE 394
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVS---------GFAKTE-RIMKSLFIRKL 178
+ + ++ N+ + A + P A V G A+ E R SL IR+
Sbjct: 395 VVKFLRRFNQSFRVLALTATPGATVEAVQEVINGLGIARVEIRTEDSLDIREF 447
>gi|195136690|ref|XP_002012487.1| GI16508 [Drosophila mojavensis]
gi|193906452|gb|EDW05319.1| GI16508 [Drosophila mojavensis]
Length = 293
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 3 LEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLL--LHS--PSQGTLLLLSSSPNLK 58
L +QH I + N LV+L +GL IA+V++ LH P + + + P +
Sbjct: 58 LRSYQHSIVQAALYRNT-LVVLPTGLG-KTFIAAVVMYNLHRWYPESKLIFMAPTRPLVA 115
Query: 59 SQI--IHYLAPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQ----RLP 112
QI + P P E+T LP R L+++ ++FF TP+++ D+L + P
Sbjct: 116 QQIAACQKIMPFCPEDTVELTGRLPRAKRAELWATKRVFFATPQVVQSDMLDTGDGLQFP 175
Query: 113 TSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKS 172
++ L++ H T + + + N + A S P + A + ++
Sbjct: 176 YMSIKLLVVDEAHRAKGRYAYTQVTDSLMARNPYFRMLALSATPGRTMEDVAA---VCRN 232
Query: 173 LFIRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEM 228
L I L + ++V + + + + + VP++ + + +L+++D L+ +
Sbjct: 233 LCISHLEVRWDDSIDVRQYVHKR--SMRTIVVPLNDRIKEPRAQLLQIIDPYLQPL 286
>gi|332030741|gb|EGI70417.1| Fanconi anemia group M protein [Acromyrmex echinatior]
Length = 1326
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 128/311 (41%), Gaps = 35/311 (11%)
Query: 19 GGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLA----PNAP 70
+V L +GL IA+V++ + PS + L + P + QI PN
Sbjct: 48 NTMVCLPTGLG-KTFIAAVVMFNFWRWYPSGKIVFLAPTKPLVAQQIKACYEVMGIPNVD 106
Query: 71 LLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTEN 130
++ E+T + +R + +I F TP++ DL +P+ + ++I H
Sbjct: 107 MI--ELTGAVIQKNREIAWLKKRIIFATPQVFHNDLEKSIIPSHLIKCVVIDEAHKALGK 164
Query: 131 STETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE 190
+ RI+ + N+ I A S P + ++++L I L L +++
Sbjct: 165 HSYCECVRILSTQNQYFRILALSATPGNKLDN---VHEVIQNLNISHLELRDENSIDIVP 221
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENGLFKSFD 250
+ + + + VP+S + ++ + +MD +K + + N + + G + F
Sbjct: 222 YINKRKVDI--ILVPLSNELAAFKERYIIIMDRHVKFLMQCNVLQGHTANISKG--RVF- 276
Query: 251 EILRRQLDPIWHILGKKTKQLVSDLKTLRKLL------DYLVRYDAVTYLKYLDTLRVSE 304
+LR + + K+ +KTL LL + ++R+ + K+ +T S+
Sbjct: 277 HLLRE-----FKMKTNKSGNYGQIMKTLNILLTMYHAYELMIRHGLRAFRKFYETH--SD 329
Query: 305 SFRSVWIFAES 315
F WI ES
Sbjct: 330 KF---WIHNES 337
>gi|189082208|sp|A6ZVS0.1|MPH1_YEAS7 RecName: Full=ATP-dependent DNA helicase MPH1; AltName:
Full=Mutator phenotype protein 1
gi|151943160|gb|EDN61495.1| DEAH family protein [Saccharomyces cerevisiae YJM789]
Length = 993
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T + T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDIVCLVIDEAHRATGSYAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLDISKIEI 264
>gi|401625242|gb|EJS43260.1| mph1p [Saccharomyces arboricola H-6]
Length = 990
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T + T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDVVCLVIDEAHRATGSYAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLNISKIEI 264
>gi|297619461|ref|YP_003707566.1| ERCC4 domain-containing protein [Methanococcus voltae A3]
gi|297378438|gb|ADI36593.1| ERCC4 domain protein [Methanococcus voltae A3]
Length = 822
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVL--LLHSPSQGTLLLLSSSPNLKSQII 62
+ Q I+A L+ L +L +GL + + +LH L++ S P L Q
Sbjct: 31 YQQMIVANALK--TNTLCVLGTGLGKTAIATLTIAGILHKKGGKALIIAPSRP-LVEQHF 87
Query: 63 HYLAPNAPLLPSEI---TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGL 119
L + EI + R L+ +G+IF TP+++ D++ RL ++ + L
Sbjct: 88 ESLKKFLNVPEDEILILNGKVQPLKRQELWENGRIFISTPQVVENDIIATRLNPNDFSIL 147
Query: 120 IILNTHALTENSTETFICRIIK 141
+ H T N + TF+ + +
Sbjct: 148 VADEAHHSTGNHSYTFVGNVFR 169
>gi|119189445|ref|XP_001245329.1| hypothetical protein CIMG_04770 [Coccidioides immitis RS]
gi|121921995|sp|Q1DY43.1|MPH1_COCIM RecName: Full=ATP-dependent DNA helicase MPH1
gi|392868234|gb|EAS33985.2| ATP-dependent DNA helicase MPH1 [Coccidioides immitis RS]
Length = 1110
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 21 LVILSSGLSLPKLIASVLL--LHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE--- 75
LV L +GL + A+V+L H ++ ++ + L SQ + A + S+
Sbjct: 341 LVALPTGLGKTFIAATVMLNWFHWTKDAQIVFVAPTKPLVSQQVDACFHIAGIPRSQTTL 400
Query: 76 ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
+T + P R + S ++FF+TP+ ++ DL T + L++ H T
Sbjct: 401 LTGNTPPGVRAEEWRSKRVFFMTPQTIMNDLKTGIADPKRIVLLVVDEAHRATGAYAYVE 460
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
I + ++ N + A + P A V + ++ L I ++ +
Sbjct: 461 IVKFLQRFNNSFRVLALTATPGATVEA---VQEVIDGLSISRIEI 502
>gi|349578953|dbj|GAA24117.1| K7_Mph1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 993
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 58 KSQIIHYLAPNAPL-------------LPSEITA---DLPANHRHTLYSSGQIFFVTPRI 101
K++II + AP PL +PS+ TA D +R ++++ ++FF TP++
Sbjct: 130 KAKII-FTAPTRPLVAQQIKACLGITGIPSDQTAILLDKSRKNREEIWANKRVFFATPQV 188
Query: 102 LIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVS 161
+ DL L ++ L+I H T + T + + I N + A + P + +
Sbjct: 189 VENDLKRGVLDPKDIVCLVIDEAHRATGSYAYTNVVKFIDRFNSSYRLLALTATPASDLE 248
Query: 162 GFAKTERIMKSLFIRKLHL 180
G + ++ +L I K+ +
Sbjct: 249 G---VQEVVNNLDISKIEI 264
>gi|328791598|ref|XP_393083.4| PREDICTED: Fanconi anemia group M protein [Apis mellifera]
Length = 1194
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 16/222 (7%)
Query: 19 GGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPS 74
LV L +GL IA+V++ + P + L + P + QI + N +PS
Sbjct: 49 NTLVCLPTGLG-KTFIAAVVMYNFWRWYPWGKIIFLAPTKPLVTQQI--FACHNTMGIPS 105
Query: 75 ----EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTEN 130
E+T + R +S +I F TP++ DL +P+ + ++I H
Sbjct: 106 AETIELTGAINLKKREVAWSKKRIIFATPQVFHNDLNKNIVPSDLIKCIVIDEAHKALGK 165
Query: 131 STETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE 190
+ RI+ N+ + A S P + ++++L I + L +++
Sbjct: 166 HSYCECIRILNGKNQNFRVLALSATPGNKIDN---VHEVLQNLLIAHVELRDETSLDIVP 222
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
+ ++ + + VP++ + ++ + +MD +K + + N
Sbjct: 223 YINKKKVEI--ILVPLNNKLTEYKEKYIFIMDRHVKILLQNN 262
>gi|71413054|ref|XP_808683.1| DNA repair protein [Trypanosoma cruzi strain CL Brener]
gi|70872939|gb|EAN86832.1| DNA repair protein, putative [Trypanosoma cruzi]
Length = 1166
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 85 RHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE-----TFICRI 139
R T Y +G + ++ R+L DLL +RL + I+L + S F I
Sbjct: 106 RCTYYQTGGVVVLSSRMLCADLLHRRLSRELVGIAIVLLPYGTPMRSDRVVPSIAFCAEI 165
Query: 140 ---------IKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLH-----LWPRFQ 185
+ S R SD P V + RI + F+ K+H L+PRF+
Sbjct: 166 LLRGGGAMQLLSCRRHPPFILISDNP-CFVRYLLQRRRIGQEPFLTKVHVDEIQLFPRFR 224
Query: 186 VNVS---EELEREPPVVVD-VRVPMSKYMGGIQKAILEVMDACLKEM 228
++V E+L +E P+ V+ V V +S + I + +V+ ++E+
Sbjct: 225 LSVMQHFEQLAKERPLNVERVAVGVSSSITAIDGLLCQVIKEVIREL 271
>gi|448529774|ref|XP_003869912.1| Mph1 protein [Candida orthopsilosis Co 90-125]
gi|380354266|emb|CCG23779.1| Mph1 protein [Candida orthopsilosis]
Length = 1067
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEITA-- 78
LV L +GL IAS ++L+ L P+ K I ++AP PL+ +I A
Sbjct: 133 LVALPTGLG-KTFIASTVMLN--------FLRWFPSSK---IIFMAPTKPLVAQQIKACC 180
Query: 79 --------------DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 124
+ +R +++S Q+FF TP+++ DL + ++ L+I
Sbjct: 181 SITGISSSKVAILLEKTRKNREEIWNSRQVFFTTPQVVENDLAFGVVNPKSIVLLVIDEA 240
Query: 125 HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 184
H N + + ++ N A + P A V G + ++ +L I K+ +
Sbjct: 241 HRARGNYSYNNVVNFLRRFNDSFRTLALTATPAADVEG---VQAVIDNLKISKVEVRTEQ 297
Query: 185 QVNVSEELERE 195
+++ + ++R+
Sbjct: 298 SIDIIKYMKRK 308
>gi|334183045|ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
gi|332193686|gb|AEE31807.1| fanconi anemia group M protein [Arabidopsis thaliana]
Length = 1390
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL LIA+V++ + QG ++ + S L Q I N +P E T
Sbjct: 132 LVALPTGLG-KTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACH-NIVGIPQEWT 189
Query: 78 ADLPA----NHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
DL + R L+ S ++FFVTP++L D+ + T+ L L+I H N +
Sbjct: 190 IDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGNYSY 249
Query: 134 TFICRIIKSLNREAYIRAFSDKP 156
+ R + ++ + I A + P
Sbjct: 250 CVVVRELMAVPIQLRILALTATP 272
>gi|195436432|ref|XP_002066172.1| GK22219 [Drosophila willistoni]
gi|194162257|gb|EDW77158.1| GK22219 [Drosophila willistoni]
Length = 1284
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQI 61
+ Q+I+ L + LV+L +GL IA+VL+ + +G ++ ++ + L SQ
Sbjct: 68 YQQNIVQTALYK--NTLVVLPTGLG-KTFIAAVLMYNYYRWYPKGKIIFMAPTRPLVSQQ 124
Query: 62 IHYLAPNAPLLPS---EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQ-----RLPT 113
I P E+T LP R L+ + ++FF TP+++ D+L Q P
Sbjct: 125 IAACQKIMPFTDQDTVELTGRLPRVKRMELWRTKRVFFATPQVVHSDMLDQADQSHSFPF 184
Query: 114 SNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSL 173
++ L++ H T + + + N + + A S P + A + ++L
Sbjct: 185 GSVKLLVVDEAHRAKGRYAYTQVTESLMAHNPQFRMLALSATPGRTMEDVAA---VCRNL 241
Query: 174 FIRKLHL-W 181
+I L + W
Sbjct: 242 YISNLAVRW 250
>gi|193083867|gb|ACF09548.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group
II euryarchaeote KM3-85-F5]
Length = 593
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 73 PSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
P I+ P R L+SS ++ F TP+++ D+L L + + L++ H T N
Sbjct: 91 PISISGQQPVAKRPDLWSSSRLVFATPQVVRNDVLRGTLSLAECSLLVVDEAHHCTGNHA 150
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL 180
+ + S + + I A + P + + + E + L I+++HL
Sbjct: 151 MAQVAELYISQSEDPLILATTASPGSKTN---QVEEVCTRLGIQRIHL 195
>gi|223477217|ref|YP_002581470.1| ATP-dependent RNA helicase [Thermococcus sp. AM4]
gi|214032443|gb|EEB73273.1| ATP-dependent RNA helicase [Thermococcus sp. AM4]
Length = 807
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQ--GTLLLLSSSPNLKSQIIH 63
+Q +I +E N LV+L +GL LIA ++ + S+ G +L L+ + L Q
Sbjct: 28 YQEVIYARCKERNC-LVVLPTGLG-KTLIAMLIADYRLSKYGGKVLFLAPTKPLAMQHAE 85
Query: 64 YLAPNAPLLPSEI---TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P +I T +L + R L+ + TP+ + DLLT R+ ++ L+
Sbjct: 86 SFRKLFNLPPEKINVLTGELSPDKRAELWRKSVVITATPQTIENDLLTGRISLEDVVLLV 145
Query: 121 ILNTHALTENSTETFICR 138
+ H N FI +
Sbjct: 146 VDEAHRAVGNYAYVFIAK 163
>gi|326483398|gb|EGE07408.1| helicase domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 1176
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 58 KSQIIHYLAPNAPLLPSEI-----------------TADLPANHRHTLYSSGQIFFVTPR 100
KS I ++AP PL+ ++ T ++P R T + S ++FF+TP+
Sbjct: 390 KSAQIVFVAPTKPLVAQQVDACFNIVGIPRSQTTMLTGNVPPGLRATEWESKRVFFMTPQ 449
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
LI DL + + L++ H T + R I+ N + A + P + V
Sbjct: 450 TLINDLKSGIADPKRIVLLVVDEAHRATGAYVYVEVVRFIQRFNTSFRVLALTATPGSTV 509
>gi|15219634|ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis thaliana]
gi|332193685|gb|AEE31806.1| fanconi anemia group M protein [Arabidopsis thaliana]
Length = 1324
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL LIA+V++ + QG ++ + S L Q I N +P E T
Sbjct: 132 LVALPTGLG-KTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACH-NIVGIPQEWT 189
Query: 78 ADLPA----NHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
DL + R L+ S ++FFVTP++L D+ + T+ L L+I H N +
Sbjct: 190 IDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGNYSY 249
Query: 134 TFICRIIKSLNREAYIRAFSDKP 156
+ R + ++ + I A + P
Sbjct: 250 CVVVRELMAVPIQLRILALTATP 272
>gi|397780382|ref|YP_006544855.1| fanconi anemia group M protein [Methanoculleus bourgensis MS2]
gi|396938884|emb|CCJ36139.1| fanconi anemia group M protein [Methanoculleus bourgensis MS2]
Length = 773
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 21 LVILSSGL--SLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQII----HYLAPNAPLLPS 74
+V+L +GL + L+ + L+S QG +L+L+ + L Q + +L P
Sbjct: 33 MVVLPTGLGKTAVALLVAASRLYS-HQGKVLMLAPTKPLVEQHLRFFKQFLLFQEGSEPQ 91
Query: 75 E-----ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTE 129
E T D P + R + + +I F TP+++ D L R +++ L++ H
Sbjct: 92 ESDFVMFTGDTPPDERAAAWEACRICFATPQVVKNDCLAGRYSLADVVLLVVDECHRAVG 151
Query: 130 NSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFI 175
N FI + + R + A + P AK + + +L+I
Sbjct: 152 NYAYVFIAQHYCTTARNPLLLAMTASPGG---DQAKVQEVCNNLYI 194
>gi|150399457|ref|YP_001323224.1| Hef nuclease [Methanococcus vannielii SB]
gi|150012160|gb|ABR54612.1| ERCC4 domain protein [Methanococcus vannielii SB]
Length = 776
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIA-SVLLLHSPSQGTLLLLSSSPNLKSQIIH 63
+ Q ++A L++ L +L +GL + A ++ + S G +L+++ S L Q H
Sbjct: 18 YQQLVVANALKQ--NTLCVLGTGLGKTAIAALTIAGILSKRNGKVLIIAPSRPLVDQ--H 73
Query: 64 YLAPNAPLL--PSEI---TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAG 118
+ N+ L P +I + R ++ +G+IF TP++ D+++ L T + +
Sbjct: 74 QKSMNSFLNIDPEKIIVLNGKISPLKREEMWKTGKIFIATPQVAENDIISGILKTKDFSL 133
Query: 119 LIILNTHALTENSTETFICRIIK 141
LI H T N + TF+ K
Sbjct: 134 LIADEAHHTTGNHSYTFVANTFK 156
>gi|390132011|gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
thaliana]
Length = 1344
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHSP---SQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL LIA+V++ + QG ++ + S L Q I N +P E T
Sbjct: 134 LVALPTGLG-KTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACH-NIVGIPQEWT 191
Query: 78 ADLPA----NHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTE 133
DL + R L+ S ++FFVTP++L D+ + T+ L L+I H N +
Sbjct: 192 IDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGNYSY 251
Query: 134 TFICRIIKSLNREAYIRAFSDKP 156
+ R + ++ + I A + P
Sbjct: 252 CVVVRELMAVPIQLRILALTATP 274
>gi|449017481|dbj|BAM80883.1| similar to ATP-dependent RNA helicase [Cyanidioschyzon merolae
strain 10D]
Length = 1770
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 21 LVILSSGLSLPKLIASVLLLHS----PSQGTLLLLSSSPNLKSQI--IHYLAPNAPLLPS 74
LV L +GL LIA+V++L+ P + + + P + Q+ + A AP L +
Sbjct: 201 LVCLPTGLGK-TLIAAVVMLNYMRWYPDGIVVFVAPTRPLVHQQMKACYQSAGIAPQLTA 259
Query: 75 EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALT 128
E+T R L+ S ++FF TP++++ D+L P + ++ H T
Sbjct: 260 ELTGHTRLAARRALWHSRRVFFSTPQVMLNDVLRHICPVQRIVCVVFDEAHRAT 313
>gi|367043588|ref|XP_003652174.1| hypothetical protein THITE_36500 [Thielavia terrestris NRRL 8126]
gi|346999436|gb|AEO65838.1| hypothetical protein THITE_36500 [Thielavia terrestris NRRL 8126]
Length = 1101
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 18 NGGLVILSSGLSLPKLIASVLLLHS--PSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSE 75
N LV L +GL + A+V+L + + ++ ++ + L SQ + A + S+
Sbjct: 175 NNTLVALPTGLGKTFIAATVMLNYYRWTKRAKIVFVAPTKPLASQQVQACLNVAGIPRSQ 234
Query: 76 ---ITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENST 132
+T + P R + + ++FF+TP+ L+ DL ++ L+I H T +
Sbjct: 235 ATLLTGETPPGLREEEWGTKRLFFMTPQTLMNDLSKGYADPKSIVLLVIDEAHRATGDYA 294
Query: 133 ETFICRIIKSLNREAYIRAFSDKPTAMVSG 162
+ I+ ++ + A + P + V G
Sbjct: 295 YVKVVEFIRRFSKSFRVLALTATPGSTVEG 324
>gi|397566992|gb|EJK45331.1| hypothetical protein THAOC_36056 [Thalassiosira oceanica]
Length = 2326
Score = 40.0 bits (92), Expect = 5.0, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 20/177 (11%)
Query: 463 QTSSKKKKSKEPKGYGILDGVAPVK-----IAQNAEASSVSKQEHDALLAAASKIRNQGK 517
Q KS PKG + VK + N A S +K+ +DA L SK
Sbjct: 75 QARQASVKSPRPKGLVLARAGGRVKGVESNLGSNHPARSSTKENYDAPLPPPSKETTARP 134
Query: 518 SDDGDNPETYYGSKGPGRGRGKGR-------NRNGPACVPQ--SANKDSKSN----SKAA 564
+ DGDN +T Y G R + +R G + SA +DS+SN +
Sbjct: 135 ALDGDNGKTIYAPADEGTARKRPNYEAASAFDRTGADLITAKLSAAQDSRSNWSSFQRRR 194
Query: 565 IEDKPEISGSGNEG--PADEIHSGVVGYSGGMLETAFVEKEVQWKRSLKTDTAESKD 619
K +G+ NEG P E + +V G A ++ ++ + D AE+ D
Sbjct: 195 YRGKSPPAGTNNEGLLPLKETAASLVPDGKGEGIDAPAVEQTAREKPHRGDGAEAFD 251
>gi|383319514|ref|YP_005380355.1| ERCC4-like helicase [Methanocella conradii HZ254]
gi|379320884|gb|AFC99836.1| ERCC4-like helicase [Methanocella conradii HZ254]
Length = 765
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEI---T 77
L++L +GL +IA +++L +G L+LS + L Q +L +P ++ T
Sbjct: 49 LIVLPTGLG-KTIIALLVMLERLEKGKALMLSPTKPLVEQHAAFLK-RTLTIPEQVAVFT 106
Query: 78 ADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFIC 137
+ + R ++ +I TP+++ DLLT+R +++ ++ H T + +I
Sbjct: 107 GSVAPSKRVDIWKGSRIIVSTPQVIENDLLTKRFDLKDVSLIVFDEAHRATGDYAYVYIA 166
Query: 138 R 138
+
Sbjct: 167 K 167
>gi|240103224|ref|YP_002959533.1| Hef nuclease [Thermococcus gammatolerans EJ3]
gi|239910778|gb|ACS33669.1| Hef, Helicase-associated endonuclease for fork-structured DNA (Hef)
[Thermococcus gammatolerans EJ3]
Length = 801
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 6 HQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQ--GTLLLLSSSPNLKSQIIH 63
+Q +I +E N LV+L +GL LIA ++ + S+ G +L L+ + L Q
Sbjct: 14 YQEVIYARCKERNC-LVVLPTGLG-KTLIAMLIADYRLSKYGGKVLFLAPTKPLAMQHAE 71
Query: 64 YLAPNAPLLPSEI---TADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI 120
L P +I T +L R L+ + TP+ + D+LT R+ ++ L+
Sbjct: 72 SFRRLFNLPPEKINVLTGELSPEKRAELWRKSVVVTATPQTVENDILTGRISLEDVVLLV 131
Query: 121 ILNTHALTENSTETFICR 138
+ H N FI R
Sbjct: 132 VDEAHRAVGNYAYVFIAR 149
>gi|386002261|ref|YP_005920560.1| Putative ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210317|gb|AET64937.1| Putative ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
Length = 788
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 5 FHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHY 64
F + A LQ LV+L +GL ++A ++L+ ++G +L L+ + L Q +
Sbjct: 20 FQLELAASALQAST--LVVLPTGLG-KTVVALMVLIARLNRGKVLFLAPTKPLVEQHASF 76
Query: 65 LA---PNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLII 121
L ++ ++ S T ++ R ++ +I TP+++ DLL++R+ +++ +I
Sbjct: 77 LENVLADSTIVAS-FTGEILPERRKEMWEEAKIVVSTPQVIENDLLSRRISLRDVSCIIF 135
Query: 122 LNTHALTENSTETFIC 137
H N +I
Sbjct: 136 DEAHRAVGNYAYVYIA 151
>gi|326476158|gb|EGE00168.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1176
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 58 KSQIIHYLAPNAPLLPSEI-----------------TADLPANHRHTLYSSGQIFFVTPR 100
KS I ++AP PL+ ++ T ++P R T + S ++FF+TP+
Sbjct: 390 KSAQIVFVAPTKPLVAQQVDACFNIVGIPRSQTTMLTGNVPPGLRATEWDSKRVFFMTPQ 449
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
LI DL + + L++ H T + + I+ N + A + P + V
Sbjct: 450 TLINDLKSGIADPKRIVLLVVDEAHRATGAYVYVEVVKFIQRFNTSFRVLALTATPGSTV 509
>gi|302661145|ref|XP_003022243.1| hypothetical protein TRV_03646 [Trichophyton verrucosum HKI 0517]
gi|291186180|gb|EFE41625.1| hypothetical protein TRV_03646 [Trichophyton verrucosum HKI 0517]
Length = 1177
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 58 KSQIIHYLAPNAPLLPSEI-----------------TADLPANHRHTLYSSGQIFFVTPR 100
KS I ++AP PL+ ++ T ++P R T + S ++FF+TP+
Sbjct: 392 KSAQIVFVAPTKPLVAQQVDACFNIVGIPRSQTTMLTGNVPPGLRATEWESKRVFFMTPQ 451
Query: 101 ILIVDLLTQRLPTSNLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMV 160
LI DL + + L++ H T + + I+ N + A + P + V
Sbjct: 452 TLINDLKSGIADPKRIVLLVVDEAHRATGAYVYVEVVKFIQRFNTSFRVLALTATPGSTV 511
>gi|294656897|ref|XP_002770326.1| DEHA2D16896p [Debaryomyces hansenii CBS767]
gi|218511696|sp|Q6BRF0.2|MPH1_DEBHA RecName: Full=ATP-dependent DNA helicase MPH1
gi|199431824|emb|CAR65680.1| DEHA2D16896p [Debaryomyces hansenii CBS767]
Length = 1105
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 21 LVILSSGLSLPKLIASVLLLHSPS---QGTLLLLSSSPNLKSQIIHYLAPNAPLLPSEIT 77
LV L +GL IAS ++L+ +G ++ ++ + L +Q I + SE+
Sbjct: 104 LVALPTGLG-KTFIASTVMLNFTRWFPRGKIIFMAPTKPLVAQQIKACCGITGIPTSEVA 162
Query: 78 A--DLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTENSTETF 135
D +R ++ S +FF TP+++ DL + + L+I H N
Sbjct: 163 ILLDKSRRNRADIWDSKTVFFTTPQVVENDLTAGIIDPKEVVLLVIDEAHKSKGNYAYNN 222
Query: 136 ICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSEELERE 195
+ + I N I A + P + V G + I+ +L I K+ + +++++ ++++
Sbjct: 223 VVKFITRFNISFRILALTATPASDVEG---VQEIIDNLSISKVEVRTEQSIDITKYMKQK 279
>gi|380028688|ref|XP_003698023.1| PREDICTED: Fanconi anemia group M protein-like [Apis florea]
Length = 1099
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 16/222 (7%)
Query: 19 GGLVILSSGLSLPKLIASVLLLH----SPSQGTLLLLSSSPNLKSQIIHYLAPNAPLLPS 74
LV L +GL IA+V++ + P + L + P + QI + N +PS
Sbjct: 49 NTLVCLPTGLG-KTFIAAVVMYNFWRWYPWGKIIFLAPTKPLVAQQI--FACHNTMGIPS 105
Query: 75 ----EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNTHALTEN 130
E+T + R +S +I F TP++ DL +P+ + ++I H
Sbjct: 106 AETIELTGAINLKKREIAWSKKRIIFATPQVFHNDLNKNIVPSDLIKCIVIDEAHKALGK 165
Query: 131 STETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRFQVNVSE 190
+ RI+ N+ + A S P + ++++L I + L +++
Sbjct: 166 HSYCECIRILNEKNQNFRVLALSATPGNKIDN---VHEVLQNLLIAHVELRDETSLDIIP 222
Query: 191 ELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTN 232
+ ++ + + VP++ + ++ + +MD +K + + N
Sbjct: 223 YINKKKVEI--ILVPLNDKLTEYKEKYIFIMDRHVKILLQYN 262
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,036,689,876
Number of Sequences: 23463169
Number of extensions: 475374548
Number of successful extensions: 1598600
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 681
Number of HSP's that attempted gapping in prelim test: 1594680
Number of HSP's gapped (non-prelim): 2687
length of query: 715
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 565
effective length of database: 8,839,720,017
effective search space: 4994441809605
effective search space used: 4994441809605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)