Query 005093
Match_columns 715
No_of_seqs 491 out of 3711
Neff 10.2
Searched_HMMs 46136
Date Thu Mar 28 17:56:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005093.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005093hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1506 DAP2 Dipeptidyl aminop 100.0 2E-48 4.3E-53 430.1 52.9 588 3-715 30-618 (620)
2 PRK10115 protease 2; Provision 100.0 2.5E-42 5.3E-47 383.0 50.9 529 45-714 129-676 (686)
3 KOG2100 Dipeptidyl aminopeptid 100.0 5E-34 1.1E-38 316.7 52.0 592 13-714 124-748 (755)
4 KOG2281 Dipeptidyl aminopeptid 100.0 6.3E-33 1.4E-37 280.0 36.3 340 344-712 515-866 (867)
5 PF00326 Peptidase_S9: Prolyl 100.0 2.4E-30 5.3E-35 250.1 14.2 206 498-715 2-211 (213)
6 COG1770 PtrB Protease II [Amin 100.0 2.2E-25 4.7E-30 229.8 43.6 537 49-694 80-658 (682)
7 COG1505 Serine proteases of th 100.0 1E-25 2.2E-30 228.9 36.8 345 336-715 300-648 (648)
8 PRK01029 tolB translocation pr 100.0 3.5E-27 7.6E-32 249.6 27.1 267 1-387 150-425 (428)
9 PRK03629 tolB translocation pr 99.9 1.7E-25 3.8E-30 238.0 27.5 252 12-386 175-427 (429)
10 KOG2237 Predicted serine prote 99.9 2E-23 4.2E-28 213.3 38.3 302 387-714 392-706 (712)
11 PRK05137 tolB translocation pr 99.9 3.3E-24 7.2E-29 229.8 28.2 250 13-386 179-432 (435)
12 PRK04792 tolB translocation pr 99.9 5.2E-24 1.1E-28 227.5 27.9 251 13-386 195-446 (448)
13 PRK04043 tolB translocation pr 99.9 6.5E-24 1.4E-28 222.9 27.1 244 14-377 167-412 (419)
14 PRK02889 tolB translocation pr 99.9 1.1E-23 2.3E-28 224.7 28.0 250 14-386 174-424 (427)
15 PRK04922 tolB translocation pr 99.9 9.9E-24 2.1E-28 225.8 27.7 252 11-385 179-431 (433)
16 PRK00178 tolB translocation pr 99.9 2.4E-23 5.1E-28 223.8 27.8 248 15-385 178-426 (430)
17 PRK05137 tolB translocation pr 99.9 1.7E-22 3.7E-27 216.6 27.8 245 53-412 164-414 (435)
18 PRK01029 tolB translocation pr 99.9 4.2E-22 9.2E-27 210.9 27.1 252 48-413 142-406 (428)
19 PRK04043 tolB translocation pr 99.9 6.7E-22 1.4E-26 207.7 27.6 239 55-412 155-402 (419)
20 PRK13604 luxD acyl transferase 99.9 7.6E-22 1.7E-26 192.7 22.5 224 457-694 14-246 (307)
21 PRK03629 tolB translocation pr 99.9 3.6E-21 7.9E-26 204.9 28.3 241 55-411 164-407 (429)
22 PRK02889 tolB translocation pr 99.9 4.4E-21 9.6E-26 204.6 27.8 239 55-410 164-403 (427)
23 PRK01742 tolB translocation pr 99.9 4.2E-21 9.2E-26 205.0 26.7 243 14-386 182-425 (429)
24 PRK04792 tolB translocation pr 99.9 9.8E-21 2.1E-25 202.3 28.3 241 54-410 182-425 (448)
25 PRK10566 esterase; Provisional 99.9 2.2E-21 4.8E-26 192.8 21.1 226 467-714 14-249 (249)
26 PRK04922 tolB translocation pr 99.9 1.8E-20 4E-25 200.6 27.5 243 53-411 166-412 (433)
27 KOG1455 Lysophospholipase [Lip 99.9 4.3E-21 9.3E-26 180.9 19.4 250 456-713 31-312 (313)
28 PRK00178 tolB translocation pr 99.9 2.6E-20 5.7E-25 200.2 28.3 242 53-410 161-406 (430)
29 PLN02298 hydrolase, alpha/beta 99.9 6.7E-21 1.5E-25 197.5 22.8 251 456-714 36-318 (330)
30 PHA02857 monoglyceride lipase; 99.9 7E-21 1.5E-25 192.4 22.4 242 458-714 6-274 (276)
31 PLN02385 hydrolase; alpha/beta 99.9 1.5E-20 3.3E-25 196.0 22.9 249 457-714 66-346 (349)
32 TIGR02800 propeller_TolB tol-p 99.9 1.8E-19 4E-24 193.7 27.6 242 13-377 167-409 (417)
33 PF00930 DPPIV_N: Dipeptidyl p 99.9 1.8E-20 3.9E-25 194.8 18.6 317 8-402 15-353 (353)
34 PLN02442 S-formylglutathione h 99.8 6E-20 1.3E-24 184.2 19.9 233 461-715 28-282 (283)
35 PF01738 DLH: Dienelactone hyd 99.8 2.2E-20 4.8E-25 181.0 15.6 204 465-714 1-218 (218)
36 PRK05077 frsA fermentation/res 99.8 7.7E-20 1.7E-24 192.4 20.2 235 458-715 174-414 (414)
37 PRK10749 lysophospholipase L2; 99.8 4.2E-19 9.1E-24 183.3 25.2 245 456-713 34-329 (330)
38 COG0823 TolB Periplasmic compo 99.8 1.9E-19 4E-24 187.3 21.8 240 12-373 169-410 (425)
39 TIGR02821 fghA_ester_D S-formy 99.8 3.1E-19 6.6E-24 179.0 19.9 233 461-714 23-275 (275)
40 PRK01742 tolB translocation pr 99.8 1.7E-18 3.7E-23 185.1 26.5 233 54-409 168-403 (429)
41 PRK10162 acetyl esterase; Prov 99.8 1.7E-18 3.7E-23 176.9 23.9 221 464-715 68-317 (318)
42 TIGR02800 propeller_TolB tol-p 99.8 4.3E-18 9.3E-23 183.1 27.8 244 51-410 152-397 (417)
43 PLN02652 hydrolase; alpha/beta 99.8 6.3E-19 1.4E-23 183.8 20.2 246 456-714 114-388 (395)
44 COG1647 Esterase/lipase [Gener 99.8 1.2E-19 2.6E-24 162.3 12.1 212 482-712 16-243 (243)
45 COG2267 PldB Lysophospholipase 99.8 2.1E-18 4.5E-23 172.9 19.0 244 456-714 13-295 (298)
46 COG0412 Dienelactone hydrolase 99.8 5.1E-18 1.1E-22 163.7 20.3 207 462-715 11-235 (236)
47 COG0823 TolB Periplasmic compo 99.8 8.3E-18 1.8E-22 175.0 22.4 206 100-410 196-402 (425)
48 PF05448 AXE1: Acetyl xylan es 99.8 9.1E-19 2E-23 176.1 14.4 242 455-713 59-320 (320)
49 PRK00870 haloalkane dehalogena 99.8 4.9E-17 1.1E-21 166.4 21.8 241 456-713 25-301 (302)
50 PRK05371 x-prolyl-dipeptidyl a 99.8 1.2E-16 2.6E-21 179.1 25.8 208 502-715 271-521 (767)
51 KOG1552 Predicted alpha/beta h 99.8 3.1E-17 6.7E-22 152.1 17.2 209 458-712 41-251 (258)
52 PRK11460 putative hydrolase; P 99.8 8E-17 1.7E-21 156.5 21.1 186 478-714 13-209 (232)
53 TIGR01840 esterase_phb esteras 99.7 5.7E-17 1.2E-21 156.1 17.6 194 467-677 1-197 (212)
54 COG0657 Aes Esterase/lipase [L 99.7 3.3E-17 7.2E-22 168.0 16.9 233 462-714 61-311 (312)
55 KOG1515 Arylacetamide deacetyl 99.7 4.8E-17 1E-21 162.2 15.2 226 463-713 72-335 (336)
56 TIGR03343 biphenyl_bphD 2-hydr 99.7 4.5E-17 9.8E-22 165.3 14.1 218 480-711 29-281 (282)
57 TIGR01607 PST-A Plasmodium sub 99.7 3E-16 6.4E-21 161.4 19.8 243 458-711 3-331 (332)
58 PLN02511 hydrolase 99.7 1.9E-16 4E-21 166.3 18.4 243 460-713 79-365 (388)
59 KOG4178 Soluble epoxide hydrol 99.7 6.8E-16 1.5E-20 148.8 20.4 225 477-714 40-321 (322)
60 PLN02965 Probable pheophorbida 99.7 5.6E-16 1.2E-20 154.4 20.8 214 483-712 5-252 (255)
61 TIGR03611 RutD pyrimidine util 99.7 1.6E-16 3.5E-21 158.7 16.7 216 479-711 11-256 (257)
62 COG3458 Acetyl esterase (deace 99.7 7.5E-17 1.6E-21 148.5 12.3 242 453-712 57-316 (321)
63 PRK10985 putative hydrolase; P 99.7 6.2E-16 1.3E-20 159.2 20.1 227 478-714 55-321 (324)
64 PLN02824 hydrolase, alpha/beta 99.7 2.3E-16 4.9E-21 161.0 16.3 220 481-713 29-294 (294)
65 TIGR02240 PHA_depoly_arom poly 99.7 8.6E-16 1.9E-20 155.1 19.6 229 461-713 10-266 (276)
66 KOG4391 Predicted alpha/beta h 99.7 3.2E-16 7E-21 138.9 13.9 225 456-713 58-282 (300)
67 TIGR00976 /NonD putative hydro 99.7 9.2E-16 2E-20 169.0 20.9 130 460-598 4-135 (550)
68 PF07859 Abhydrolase_3: alpha/ 99.7 1.3E-16 2.9E-21 154.1 10.4 191 484-694 1-210 (211)
69 PF12695 Abhydrolase_5: Alpha/ 99.7 1.2E-15 2.6E-20 137.7 16.0 145 483-692 1-145 (145)
70 PRK03592 haloalkane dehalogena 99.7 2.9E-15 6.3E-20 152.9 20.6 216 481-713 27-289 (295)
71 COG0429 Predicted hydrolase of 99.7 3.4E-15 7.4E-20 143.3 19.2 241 460-714 57-341 (345)
72 PRK10673 acyl-CoA esterase; Pr 99.7 1.3E-15 2.7E-20 152.2 17.1 217 477-712 12-254 (255)
73 PLN02679 hydrolase, alpha/beta 99.7 2.2E-15 4.7E-20 157.3 19.0 219 481-712 88-356 (360)
74 PLN03087 BODYGUARD 1 domain co 99.7 2.6E-15 5.6E-20 158.5 19.5 236 459-712 182-478 (481)
75 TIGR02427 protocat_pcaD 3-oxoa 99.7 5.7E-16 1.2E-20 154.0 13.9 214 480-711 12-251 (251)
76 TIGR03056 bchO_mg_che_rel puta 99.7 2.2E-15 4.7E-20 152.7 18.0 215 480-711 27-278 (278)
77 PF02129 Peptidase_S15: X-Pro 99.7 3.6E-16 7.8E-21 156.6 11.0 223 461-692 1-271 (272)
78 PF06500 DUF1100: Alpha/beta h 99.7 1.7E-15 3.6E-20 152.8 15.5 227 462-714 174-410 (411)
79 PF02230 Abhydrolase_2: Phosph 99.6 3.7E-15 8E-20 143.8 16.6 191 477-714 10-216 (216)
80 PRK11071 esterase YqiA; Provis 99.6 8.3E-15 1.8E-19 137.3 17.7 183 482-711 2-189 (190)
81 TIGR03100 hydr1_PEP hydrolase, 99.6 1.5E-15 3.2E-20 152.2 13.1 238 460-712 9-274 (274)
82 TIGR01250 pro_imino_pep_2 prol 99.6 5.5E-15 1.2E-19 150.3 17.5 218 480-711 24-288 (288)
83 COG4946 Uncharacterized protei 99.6 4.8E-14 1E-18 138.6 22.2 125 248-402 389-514 (668)
84 PF00930 DPPIV_N: Dipeptidyl p 99.6 1.5E-14 3.3E-19 150.4 20.2 262 51-410 1-315 (353)
85 TIGR03695 menH_SHCHC 2-succiny 99.6 1.1E-14 2.3E-19 144.7 18.1 213 482-711 2-251 (251)
86 PLN02894 hydrolase, alpha/beta 99.6 3E-14 6.6E-19 150.2 21.3 222 479-715 103-387 (402)
87 TIGR01738 bioH putative pimelo 99.6 3.2E-15 6.8E-20 148.0 12.2 206 482-710 5-245 (245)
88 PRK03204 haloalkane dehalogena 99.6 1.6E-14 3.5E-19 146.1 17.4 213 481-710 34-285 (286)
89 PLN00021 chlorophyllase 99.6 5.6E-14 1.2E-18 141.5 21.1 182 462-692 36-240 (313)
90 PRK10349 carboxylesterase BioH 99.6 9.1E-15 2E-19 146.0 14.2 207 482-711 14-254 (256)
91 COG4099 Predicted peptidase [G 99.6 7.6E-15 1.6E-19 136.7 12.0 201 460-712 169-384 (387)
92 PRK06489 hypothetical protein; 99.6 1.6E-14 3.5E-19 151.1 16.2 221 481-714 69-358 (360)
93 COG2945 Predicted hydrolase of 99.6 4.1E-14 9E-19 124.2 15.6 189 463-711 14-205 (210)
94 PRK07581 hypothetical protein; 99.6 1.7E-14 3.7E-19 150.2 14.5 223 480-714 40-337 (339)
95 TIGR01836 PHA_synth_III_C poly 99.6 4.3E-14 9.3E-19 147.4 17.5 236 465-713 48-350 (350)
96 TIGR01392 homoserO_Ac_trn homo 99.6 3.7E-14 8.1E-19 148.0 16.7 245 461-711 14-351 (351)
97 TIGR01249 pro_imino_pep_1 prol 99.6 1.1E-13 2.3E-18 141.8 19.6 215 481-714 27-306 (306)
98 PF12697 Abhydrolase_6: Alpha/ 99.6 1.6E-15 3.5E-20 148.1 5.9 197 484-695 1-219 (228)
99 PLN02872 triacylglycerol lipas 99.6 1.1E-14 2.5E-19 151.1 11.8 249 459-714 51-390 (395)
100 PRK14875 acetoin dehydrogenase 99.6 3.9E-14 8.5E-19 149.9 16.1 213 479-712 129-370 (371)
101 PF10503 Esterase_phd: Esteras 99.6 5.5E-14 1.2E-18 132.3 15.1 192 466-676 2-197 (220)
102 PLN02578 hydrolase 99.6 5.9E-14 1.3E-18 146.4 17.0 208 481-711 86-353 (354)
103 KOG4409 Predicted hydrolase/ac 99.6 1.7E-13 3.6E-18 132.5 18.5 221 479-712 88-363 (365)
104 COG0400 Predicted esterase [Ge 99.6 2E-13 4.3E-18 127.1 17.7 188 477-714 14-206 (207)
105 PRK11126 2-succinyl-6-hydroxy- 99.6 8.1E-14 1.8E-18 137.9 16.1 206 481-712 2-241 (242)
106 TIGR03101 hydr2_PEP hydrolase, 99.6 6.3E-13 1.4E-17 130.0 21.9 218 461-689 8-243 (266)
107 PLN02211 methyl indole-3-aceta 99.6 3.1E-13 6.7E-18 135.3 20.1 216 478-710 15-267 (273)
108 PRK00175 metX homoserine O-ace 99.5 1.2E-13 2.5E-18 145.3 17.2 231 480-713 47-374 (379)
109 PLN03084 alpha/beta hydrolase 99.5 1.2E-13 2.6E-18 143.3 16.7 217 480-711 126-382 (383)
110 KOG4667 Predicted esterase [Li 99.5 3.3E-13 7.2E-18 120.1 16.5 210 478-699 30-246 (269)
111 PF12715 Abhydrolase_7: Abhydr 99.5 1.7E-14 3.7E-19 142.6 9.4 214 456-688 92-343 (390)
112 PF14583 Pectate_lyase22: Olig 99.5 3.8E-13 8.2E-18 133.9 16.7 315 25-410 18-383 (386)
113 KOG1838 Alpha/beta hydrolase [ 99.5 8.2E-13 1.8E-17 132.3 18.6 242 461-713 102-388 (409)
114 KOG3043 Predicted hydrolase re 99.5 3.6E-13 7.9E-18 121.4 14.4 172 498-715 55-242 (242)
115 PF08840 BAAT_C: BAAT / Acyl-C 99.5 1.9E-13 4.1E-18 130.4 11.6 174 541-715 3-212 (213)
116 KOG1454 Predicted hydrolase/ac 99.5 5.2E-13 1.1E-17 135.3 14.5 220 479-714 56-325 (326)
117 PRK08775 homoserine O-acetyltr 99.5 4.8E-13 1E-17 139.1 14.0 198 499-712 85-338 (343)
118 PLN02980 2-oxoglutarate decarb 99.4 6.8E-12 1.5E-16 153.1 18.9 224 480-713 1370-1639(1655)
119 PF12740 Chlorophyllase2: Chlo 99.4 3E-11 6.5E-16 115.0 19.0 177 467-692 6-205 (259)
120 KOG0271 Notchless-like WD40 re 99.4 1.2E-10 2.5E-15 112.2 22.5 300 38-392 111-467 (480)
121 PRK06765 homoserine O-acetyltr 99.4 7.5E-12 1.6E-16 130.3 15.4 231 479-712 54-387 (389)
122 TIGR03866 PQQ_ABC_repeats PQQ- 99.4 4E-10 8.6E-15 115.3 28.1 273 13-413 8-282 (300)
123 COG3509 LpqC Poly(3-hydroxybut 99.4 3.6E-11 7.8E-16 113.8 17.8 130 459-595 41-179 (312)
124 PRK10439 enterobactin/ferric e 99.3 6.7E-11 1.5E-15 123.8 20.4 196 461-694 190-393 (411)
125 PRK05855 short chain dehydroge 99.3 1.4E-11 3.1E-16 138.9 16.0 105 460-580 10-114 (582)
126 KOG4627 Kynurenine formamidase 99.3 9.1E-12 2E-16 110.0 9.8 180 479-692 65-247 (270)
127 COG2936 Predicted acyl esteras 99.3 4.3E-11 9.2E-16 125.3 16.2 130 459-597 26-161 (563)
128 PF00756 Esterase: Putative es 99.3 3.3E-12 7.1E-17 127.0 6.9 218 462-710 5-251 (251)
129 KOG2984 Predicted hydrolase [G 99.3 3.3E-12 7.2E-17 112.4 5.3 213 483-712 44-275 (277)
130 TIGR01838 PHA_synth_I poly(R)- 99.3 8.6E-11 1.9E-15 125.7 15.2 124 465-598 174-305 (532)
131 COG2706 3-carboxymuconate cycl 99.2 8.1E-09 1.8E-13 100.0 26.2 284 15-374 15-332 (346)
132 KOG3101 Esterase D [General fu 99.2 1E-10 2.2E-15 103.9 12.1 215 461-695 24-264 (283)
133 COG4757 Predicted alpha/beta h 99.2 2.2E-10 4.9E-15 103.6 14.1 241 457-710 10-280 (281)
134 PRK07868 acyl-CoA synthetase; 99.2 4E-10 8.6E-15 133.2 18.7 234 465-713 49-361 (994)
135 PF07224 Chlorophyllase: Chlor 99.2 1.1E-09 2.3E-14 101.5 16.9 118 463-596 31-158 (307)
136 PF03583 LIP: Secretory lipase 99.2 7E-10 1.5E-14 111.0 16.9 203 502-714 18-282 (290)
137 PF02897 Peptidase_S9_N: Proly 99.2 6.3E-09 1.4E-13 111.6 25.3 267 46-413 127-407 (414)
138 PF05728 UPF0227: Uncharacteri 99.2 9.1E-10 2E-14 101.5 16.1 183 483-710 1-186 (187)
139 PF08538 DUF1749: Protein of u 99.1 3.7E-10 8E-15 109.6 11.6 223 480-711 32-303 (303)
140 KOG0293 WD40 repeat-containing 99.1 3.5E-09 7.7E-14 103.1 18.0 260 38-375 220-480 (519)
141 PF00561 Abhydrolase_1: alpha/ 99.1 1.9E-11 4.1E-16 119.8 2.5 174 511-694 1-217 (230)
142 cd00312 Esterase_lipase Estera 99.1 1.8E-10 3.8E-15 126.5 9.7 128 465-596 79-214 (493)
143 COG4946 Uncharacterized protei 99.1 1.8E-08 3.8E-13 100.1 22.3 204 161-410 422-654 (668)
144 PRK11028 6-phosphogluconolacto 99.1 1.8E-07 3.9E-12 97.0 31.2 277 11-396 7-293 (330)
145 PF03403 PAF-AH_p_II: Platelet 99.1 6.8E-10 1.5E-14 115.0 12.8 190 479-715 98-360 (379)
146 KOG2564 Predicted acetyltransf 99.1 3.1E-09 6.8E-14 99.1 13.7 116 464-592 61-179 (343)
147 COG3571 Predicted hydrolase of 99.1 1.1E-08 2.4E-13 86.9 15.7 185 481-712 14-210 (213)
148 TIGR03866 PQQ_ABC_repeats PQQ- 99.1 5.7E-08 1.2E-12 99.3 24.8 204 45-373 75-288 (300)
149 PF06342 DUF1057: Alpha/beta h 99.0 3.8E-08 8.2E-13 93.3 20.0 106 477-594 31-136 (297)
150 COG0627 Predicted esterase [Ge 99.0 2E-09 4.3E-14 107.3 12.1 227 477-714 50-312 (316)
151 PF10282 Lactonase: Lactonase, 99.0 2.3E-07 5E-12 96.4 28.0 287 15-408 12-322 (345)
152 TIGR02658 TTQ_MADH_Hv methylam 99.0 2.1E-07 4.6E-12 94.1 26.5 126 264-413 197-333 (352)
153 PF10282 Lactonase: Lactonase, 99.0 6.9E-08 1.5E-12 100.3 23.8 226 44-373 88-332 (345)
154 cd00200 WD40 WD40 domain, foun 99.0 9.8E-08 2.1E-12 96.1 23.0 267 43-394 10-279 (289)
155 PF06821 Ser_hydrolase: Serine 99.0 7.4E-09 1.6E-13 94.5 13.0 153 484-694 1-155 (171)
156 PF08662 eIF2A: Eukaryotic tra 99.0 1.2E-08 2.6E-13 95.8 14.6 154 101-352 10-163 (194)
157 COG2272 PnbA Carboxylesterase 99.0 1.6E-09 3.4E-14 110.7 8.9 132 459-596 76-218 (491)
158 KOG2112 Lysophospholipase [Lip 99.0 1.7E-08 3.7E-13 91.2 14.4 188 482-713 4-204 (206)
159 PF14583 Pectate_lyase22: Olig 99.0 2.1E-08 4.6E-13 100.4 16.5 206 99-393 38-299 (386)
160 KOG2382 Predicted alpha/beta h 99.0 2E-08 4.3E-13 97.7 15.6 224 477-714 48-314 (315)
161 PF00135 COesterase: Carboxyle 99.0 8E-10 1.7E-14 123.2 7.1 129 465-594 109-244 (535)
162 COG2382 Fes Enterochelin ester 98.9 1.3E-08 2.7E-13 97.7 13.6 196 463-694 80-282 (299)
163 KOG2624 Triglyceride lipase-ch 98.9 7.7E-09 1.7E-13 105.9 12.6 231 479-713 71-398 (403)
164 PF10340 DUF2424: Protein of u 98.9 2.2E-08 4.8E-13 100.6 15.1 203 467-693 108-350 (374)
165 KOG0318 WD40 repeat stress pro 98.9 2.1E-07 4.4E-12 94.0 21.7 157 185-392 192-378 (603)
166 KOG0271 Notchless-like WD40 re 98.9 1.7E-08 3.7E-13 97.6 13.0 121 160-348 344-467 (480)
167 PF09752 DUF2048: Uncharacteri 98.9 3.8E-08 8.2E-13 97.2 15.6 235 465-711 77-347 (348)
168 PRK11028 6-phosphogluconolacto 98.9 1.1E-06 2.4E-11 91.2 27.7 242 56-410 2-258 (330)
169 PRK13616 lipoprotein LpqB; Pro 98.9 7.1E-08 1.5E-12 105.4 19.3 169 43-306 350-532 (591)
170 KOG0318 WD40 repeat stress pro 98.9 1.5E-06 3.2E-11 88.0 26.3 211 37-281 98-341 (603)
171 COG4188 Predicted dienelactone 98.9 1.4E-08 3E-13 100.5 11.7 119 462-582 49-181 (365)
172 PF08662 eIF2A: Eukaryotic tra 98.9 9.6E-08 2.1E-12 89.7 17.0 150 44-281 7-164 (194)
173 TIGR01839 PHA_synth_II poly(R) 98.9 5.8E-08 1.3E-12 102.8 16.6 121 465-597 201-330 (560)
174 PRK13616 lipoprotein LpqB; Pro 98.9 1.6E-07 3.4E-12 102.7 19.8 180 98-371 351-533 (591)
175 COG3208 GrsT Predicted thioest 98.8 2.7E-08 5.9E-13 92.5 11.2 207 479-710 6-233 (244)
176 PF02897 Peptidase_S9_N: Proly 98.8 6.4E-07 1.4E-11 96.1 23.8 261 51-410 75-357 (414)
177 cd00707 Pancreat_lipase_like P 98.8 1.1E-08 2.4E-13 101.9 9.3 113 479-596 34-148 (275)
178 TIGR03230 lipo_lipase lipoprot 98.8 2.5E-08 5.5E-13 103.7 12.1 112 480-595 40-154 (442)
179 COG0596 MhpC Predicted hydrola 98.8 9.9E-08 2.1E-12 95.1 16.1 100 481-595 21-123 (282)
180 KOG0315 G-protein beta subunit 98.8 5.6E-07 1.2E-11 82.4 18.2 236 14-374 59-297 (311)
181 KOG3847 Phospholipase A2 (plat 98.8 8.6E-08 1.9E-12 91.0 13.5 191 477-714 114-372 (399)
182 PF02273 Acyl_transf_2: Acyl t 98.8 6.6E-08 1.4E-12 88.8 11.9 221 460-694 10-239 (294)
183 KOG0286 G-protein beta subunit 98.8 1.8E-06 4E-11 81.0 21.3 267 38-388 51-327 (343)
184 KOG2055 WD40 repeat protein [G 98.8 5.4E-07 1.2E-11 89.6 18.1 233 43-395 214-454 (514)
185 COG2021 MET2 Homoserine acetyl 98.8 1.5E-07 3.3E-12 92.9 14.1 114 479-594 49-181 (368)
186 KOG0272 U4/U6 small nuclear ri 98.7 3.4E-07 7.3E-12 90.0 14.8 237 43-406 176-416 (459)
187 KOG0315 G-protein beta subunit 98.7 3.1E-06 6.7E-11 77.7 19.6 242 43-406 41-286 (311)
188 KOG0291 WD40-repeat-containing 98.7 4.7E-06 1E-10 88.0 23.4 230 43-396 308-540 (893)
189 KOG2139 WD40 repeat protein [G 98.7 8E-07 1.7E-11 85.8 16.3 217 43-353 141-366 (445)
190 KOG0645 WD40 repeat protein [G 98.7 5.5E-06 1.2E-10 77.1 21.1 229 43-362 62-310 (312)
191 KOG0272 U4/U6 small nuclear ri 98.7 3.5E-07 7.7E-12 89.9 14.0 241 38-405 213-457 (459)
192 KOG0273 Beta-transducin family 98.7 3.5E-06 7.6E-11 84.2 21.1 254 43-395 236-512 (524)
193 KOG0973 Histone transcription 98.7 6.8E-07 1.5E-11 98.2 17.5 157 40-281 67-240 (942)
194 COG2819 Predicted hydrolase of 98.7 1.5E-06 3.3E-11 82.5 17.7 133 461-595 19-172 (264)
195 KOG0279 G protein beta subunit 98.7 3.3E-06 7.2E-11 78.9 19.2 183 13-305 82-266 (315)
196 KOG0279 G protein beta subunit 98.7 6E-06 1.3E-10 77.2 20.7 227 39-388 12-245 (315)
197 KOG0772 Uncharacterized conser 98.7 3.6E-06 7.7E-11 85.0 20.6 282 6-397 179-478 (641)
198 KOG0266 WD40 repeat-containing 98.7 1.5E-06 3.3E-11 93.6 19.8 280 43-405 160-451 (456)
199 KOG1446 Histone H3 (Lys4) meth 98.6 1.9E-05 4E-10 75.4 23.8 252 43-375 15-272 (311)
200 PTZ00421 coronin; Provisional 98.6 5.9E-06 1.3E-10 89.0 23.4 180 162-411 98-291 (493)
201 PRK10115 protease 2; Provision 98.6 7.2E-06 1.6E-10 92.4 24.9 252 52-410 79-346 (686)
202 PF03959 FSH1: Serine hydrolas 98.6 1.5E-07 3.2E-12 90.2 9.7 172 480-694 3-203 (212)
203 TIGR01849 PHB_depoly_PhaZ poly 98.6 5.2E-07 1.1E-11 93.0 14.2 70 644-713 333-406 (406)
204 KOG1407 WD40 repeat protein [F 98.6 1.1E-06 2.5E-11 81.1 14.6 210 12-353 83-293 (313)
205 cd00200 WD40 WD40 domain, foun 98.6 2.4E-06 5.3E-11 85.8 18.9 256 15-360 30-288 (289)
206 PF02239 Cytochrom_D1: Cytochr 98.6 1.4E-05 3E-10 83.1 24.1 262 47-411 41-348 (369)
207 KOG4497 Uncharacterized conser 98.6 3.9E-07 8.5E-12 86.7 11.2 142 47-282 13-155 (447)
208 PTZ00421 coronin; Provisional 98.6 1.3E-05 2.8E-10 86.4 23.4 217 41-372 74-297 (493)
209 COG2706 3-carboxymuconate cycl 98.5 6.6E-05 1.4E-09 73.4 25.0 213 100-412 43-278 (346)
210 KOG1407 WD40 repeat protein [F 98.5 3.8E-05 8.2E-10 71.3 21.7 229 43-400 65-296 (313)
211 KOG0275 Conserved WD40 repeat- 98.5 2.6E-06 5.7E-11 80.7 14.4 246 45-413 216-470 (508)
212 COG1073 Hydrolases of the alph 98.5 1.5E-06 3.3E-11 88.6 14.3 248 463-715 31-299 (299)
213 KOG0291 WD40-repeat-containing 98.5 1.5E-05 3.2E-10 84.4 20.9 184 43-353 351-541 (893)
214 PRK04940 hypothetical protein; 98.5 1.9E-06 4E-11 77.7 12.4 118 560-711 60-178 (180)
215 KOG2551 Phospholipase/carboxyh 98.5 7.1E-06 1.5E-10 75.0 15.7 122 544-714 92-221 (230)
216 PTZ00420 coronin; Provisional 98.5 5.9E-05 1.3E-09 81.9 25.2 165 41-302 73-249 (568)
217 KOG0293 WD40 repeat-containing 98.5 2.7E-06 5.8E-11 83.5 13.0 155 183-410 269-425 (519)
218 KOG2055 WD40 repeat protein [G 98.5 1.1E-05 2.3E-10 80.6 17.3 261 10-393 229-499 (514)
219 TIGR03502 lipase_Pla1_cef extr 98.5 1.4E-06 2.9E-11 96.8 12.5 96 480-580 448-575 (792)
220 KOG0296 Angio-associated migra 98.4 6.7E-05 1.5E-09 72.9 21.8 300 14-395 86-387 (399)
221 KOG0265 U5 snRNP-specific prot 98.4 3.5E-05 7.7E-10 72.9 19.2 275 38-391 43-323 (338)
222 PF10230 DUF2305: Uncharacteri 98.4 1.2E-05 2.6E-10 79.7 17.1 110 481-595 2-122 (266)
223 KOG0973 Histone transcription 98.4 7.1E-06 1.5E-10 90.4 16.5 107 184-351 130-238 (942)
224 PF08450 SGL: SMP-30/Gluconola 98.4 0.00016 3.5E-09 71.3 25.1 237 46-396 3-245 (246)
225 KOG0282 mRNA splicing factor [ 98.4 5.6E-06 1.2E-10 83.1 14.1 153 38-282 210-364 (503)
226 KOG1553 Predicted alpha/beta h 98.4 7.7E-07 1.7E-11 85.5 7.1 180 458-664 220-399 (517)
227 PTZ00420 coronin; Provisional 98.4 0.00013 2.9E-09 79.2 25.1 156 50-305 34-201 (568)
228 PF06433 Me-amine-dh_H: Methyl 98.4 0.00026 5.6E-09 70.2 24.5 267 43-413 36-323 (342)
229 PF12146 Hydrolase_4: Putative 98.3 1.1E-06 2.5E-11 68.4 5.8 58 462-528 1-58 (79)
230 KOG2314 Translation initiation 98.3 0.00025 5.4E-09 72.8 23.4 278 14-398 280-559 (698)
231 KOG1516 Carboxylesterase and r 98.3 1.2E-06 2.7E-11 97.4 7.6 127 465-595 97-232 (545)
232 KOG0263 Transcription initiati 98.3 1.9E-05 4.1E-10 84.1 15.7 203 38-302 447-650 (707)
233 PF06057 VirJ: Bacterial virul 98.3 1.7E-05 3.7E-10 71.7 13.1 181 483-711 4-190 (192)
234 TIGR02658 TTQ_MADH_Hv methylam 98.3 0.00014 3E-09 74.0 20.5 215 46-305 108-334 (352)
235 KOG0296 Angio-associated migra 98.2 0.00016 3.4E-09 70.4 19.3 213 38-375 60-273 (399)
236 PF11339 DUF3141: Protein of u 98.2 5E-05 1.1E-09 78.2 16.7 50 643-692 292-348 (581)
237 PF02239 Cytochrom_D1: Cytochr 98.2 7.5E-05 1.6E-09 77.7 18.6 198 55-374 5-211 (369)
238 PF11144 DUF2920: Protein of u 98.2 0.00012 2.5E-09 74.3 19.0 152 537-688 159-333 (403)
239 PF06028 DUF915: Alpha/beta hy 98.2 1.8E-05 4E-10 76.8 12.9 209 482-710 12-252 (255)
240 PF10142 PhoPQ_related: PhoPQ- 98.2 0.00015 3.2E-09 73.9 19.8 151 554-714 166-321 (367)
241 KOG4497 Uncharacterized conser 98.2 0.00028 6.1E-09 67.7 19.9 104 260-395 318-421 (447)
242 COG3243 PhaC Poly(3-hydroxyalk 98.2 1.7E-05 3.7E-10 79.7 12.3 90 500-597 129-219 (445)
243 KOG0266 WD40 repeat-containing 98.2 0.00015 3.2E-09 78.4 20.6 188 10-306 219-414 (456)
244 KOG2096 WD40 repeat protein [G 98.2 0.00028 6.1E-09 67.4 19.2 242 43-395 133-392 (420)
245 KOG0305 Anaphase promoting com 98.2 0.00018 4E-09 75.2 19.4 227 46-400 181-411 (484)
246 PLN00181 protein SPA1-RELATED; 98.1 0.00063 1.4E-08 79.4 26.1 94 162-304 555-651 (793)
247 COG3545 Predicted esterase of 98.1 0.00015 3.2E-09 64.0 15.2 140 535-712 37-178 (181)
248 KOG0263 Transcription initiati 98.1 1.9E-05 4E-10 84.2 11.4 194 98-364 453-648 (707)
249 KOG1273 WD40 repeat protein [G 98.1 0.0002 4.3E-09 68.4 16.9 244 45-377 26-292 (405)
250 PF07433 DUF1513: Protein of u 98.1 0.0013 2.8E-08 64.6 23.2 250 43-390 5-269 (305)
251 KOG2314 Translation initiation 98.1 0.0011 2.5E-08 68.1 23.0 262 44-410 251-525 (698)
252 KOG0282 mRNA splicing factor [ 98.1 6.5E-05 1.4E-09 75.7 13.8 232 17-360 238-502 (503)
253 COG3386 Gluconolactonase [Carb 98.1 0.0035 7.5E-08 63.0 26.2 190 163-401 86-280 (307)
254 KOG0645 WD40 repeat protein [G 98.1 0.00096 2.1E-08 62.6 20.2 151 42-282 14-172 (312)
255 KOG0643 Translation initiation 98.1 0.0019 4.1E-08 60.5 22.0 176 160-393 72-248 (327)
256 KOG0286 G-protein beta subunit 98.1 0.00025 5.4E-09 67.1 16.2 261 14-360 75-342 (343)
257 KOG0772 Uncharacterized conser 98.0 6E-05 1.3E-09 76.4 12.6 84 15-117 253-338 (641)
258 KOG0284 Polyadenylation factor 98.0 8E-05 1.7E-09 73.4 13.2 236 45-363 99-337 (464)
259 KOG1274 WD40 repeat protein [G 98.0 0.0003 6.5E-09 76.5 18.5 154 44-302 98-263 (933)
260 KOG3253 Predicted alpha/beta h 98.0 6.9E-05 1.5E-09 77.9 13.1 169 479-696 174-349 (784)
261 KOG0273 Beta-transducin family 98.0 0.00038 8.3E-09 70.1 17.9 145 98-281 361-514 (524)
262 KOG1009 Chromatin assembly com 98.0 0.00031 6.7E-09 69.4 16.4 133 14-206 36-184 (434)
263 KOG2315 Predicted translation 98.0 0.00069 1.5E-08 69.9 19.1 156 185-397 219-375 (566)
264 KOG2139 WD40 repeat protein [G 98.0 0.00011 2.3E-09 71.5 12.6 161 44-281 197-366 (445)
265 PF07819 PGAP1: PGAP1-like pro 98.0 5.8E-05 1.3E-09 72.6 10.9 104 481-593 4-121 (225)
266 COG3150 Predicted esterase [Ge 98.0 0.0002 4.3E-09 62.2 12.7 143 541-711 42-187 (191)
267 KOG1274 WD40 repeat protein [G 98.0 0.00068 1.5E-08 73.9 19.3 154 100-366 100-263 (933)
268 KOG0305 Anaphase promoting com 97.9 0.00061 1.3E-08 71.4 18.5 232 43-395 218-450 (484)
269 PF05577 Peptidase_S28: Serine 97.9 4.3E-05 9.4E-10 82.2 10.4 112 481-596 29-149 (434)
270 KOG2096 WD40 repeat protein [G 97.9 0.0013 2.8E-08 63.1 18.6 100 223-365 208-310 (420)
271 KOG2315 Predicted translation 97.9 0.0027 5.9E-08 65.6 22.2 204 43-352 166-374 (566)
272 PF12048 DUF3530: Protein of u 97.9 0.00043 9.4E-09 70.0 16.4 207 461-713 70-309 (310)
273 KOG0771 Prolactin regulatory e 97.9 0.00018 3.9E-09 71.5 13.0 210 42-364 144-355 (398)
274 COG4814 Uncharacterized protei 97.9 0.00065 1.4E-08 63.5 15.5 211 480-712 45-286 (288)
275 PLN02919 haloacid dehalogenase 97.9 0.059 1.3E-06 64.2 35.9 134 263-413 742-891 (1057)
276 PF10647 Gmad1: Lipoprotein Lp 97.9 0.0011 2.3E-08 65.4 18.3 176 100-375 27-207 (253)
277 PLN00181 protein SPA1-RELATED; 97.9 0.0016 3.4E-08 76.1 22.9 231 14-361 553-791 (793)
278 KOG2931 Differentiation-relate 97.9 0.00044 9.6E-09 66.1 14.5 122 464-596 33-158 (326)
279 KOG0643 Translation initiation 97.9 0.00082 1.8E-08 62.9 15.5 244 8-364 66-318 (327)
280 COG4947 Uncharacterized protei 97.8 4.5E-05 9.7E-10 66.1 6.7 119 545-693 88-216 (227)
281 PF10647 Gmad1: Lipoprotein Lp 97.8 0.0021 4.6E-08 63.2 19.5 58 44-114 25-82 (253)
282 PF00151 Lipase: Lipase; Inte 97.8 2.1E-05 4.6E-10 79.9 5.0 114 478-595 68-187 (331)
283 COG5354 Uncharacterized protei 97.8 0.0019 4.1E-08 66.0 18.3 240 47-398 136-381 (561)
284 PF05677 DUF818: Chlamydia CHL 97.8 0.00024 5.2E-09 69.8 11.5 111 461-581 120-236 (365)
285 PF03096 Ndr: Ndr family; Int 97.8 0.00028 6.2E-09 68.4 11.7 231 464-711 10-277 (283)
286 KOG1445 Tumor-specific antigen 97.8 0.00045 9.6E-09 71.9 13.5 160 95-302 626-799 (1012)
287 PF01674 Lipase_2: Lipase (cla 97.7 9.9E-05 2.1E-09 69.8 7.8 89 484-580 4-95 (219)
288 KOG0640 mRNA cleavage stimulat 97.7 0.0024 5.3E-08 61.0 16.6 255 2-376 120-394 (430)
289 PF08450 SGL: SMP-30/Gluconola 97.7 0.0031 6.6E-08 62.2 18.5 177 162-410 22-213 (246)
290 KOG1446 Histone H3 (Lys4) meth 97.7 0.023 5E-07 54.8 22.6 197 99-413 17-220 (311)
291 PF05705 DUF829: Eukaryotic pr 97.7 0.00044 9.6E-09 67.9 11.5 65 646-710 176-240 (240)
292 PLN02733 phosphatidylcholine-s 97.6 0.0001 2.2E-09 77.7 7.2 91 496-595 107-201 (440)
293 KOG0278 Serine/threonine kinas 97.6 0.001 2.2E-08 61.6 12.4 135 162-365 165-299 (334)
294 KOG0283 WD40 repeat-containing 97.6 0.004 8.6E-08 67.6 18.8 99 145-281 374-472 (712)
295 PF07676 PD40: WD40-like Beta 97.6 8.3E-05 1.8E-09 49.1 4.1 38 254-297 2-39 (39)
296 COG5354 Uncharacterized protei 97.6 0.014 3.1E-07 59.8 21.1 158 43-282 174-337 (561)
297 KOG0278 Serine/threonine kinas 97.6 0.0027 6E-08 58.8 14.5 171 2-275 108-282 (334)
298 PF07676 PD40: WD40-like Beta 97.6 0.00012 2.5E-09 48.5 4.3 36 31-71 2-38 (39)
299 KOG1524 WD40 repeat-containing 97.6 0.00027 5.8E-09 72.2 8.7 135 40-194 102-238 (737)
300 KOG4840 Predicted hydrolases o 97.6 0.0029 6.3E-08 57.7 14.0 108 481-598 36-147 (299)
301 KOG0639 Transducin-like enhanc 97.5 0.0021 4.5E-08 65.4 14.3 227 45-392 422-649 (705)
302 COG1506 DAP2 Dipeptidyl aminop 97.5 0.011 2.3E-07 66.6 21.5 225 43-371 13-259 (620)
303 KOG0294 WD40 repeat-containing 97.5 0.017 3.7E-07 55.7 19.2 178 8-281 3-189 (362)
304 KOG1273 WD40 repeat protein [G 97.5 0.0057 1.2E-07 58.7 16.0 185 100-394 27-214 (405)
305 KOG3975 Uncharacterized conser 97.5 0.013 2.7E-07 54.9 17.7 129 462-593 10-145 (301)
306 PF07433 DUF1513: Protein of u 97.5 0.035 7.6E-07 54.8 22.0 213 15-305 27-251 (305)
307 PTZ00472 serine carboxypeptida 97.5 0.0012 2.5E-08 71.0 12.9 131 462-597 60-218 (462)
308 COG3391 Uncharacterized conser 97.5 0.062 1.3E-06 56.6 25.5 187 162-411 96-284 (381)
309 KOG0288 WD40 repeat protein Ti 97.5 0.00095 2.1E-08 66.2 10.6 261 11-360 192-458 (459)
310 PF00975 Thioesterase: Thioest 97.5 0.001 2.2E-08 64.9 11.0 98 483-594 2-103 (229)
311 KOG0289 mRNA splicing factor [ 97.4 0.054 1.2E-06 54.6 21.9 124 183-374 347-471 (506)
312 KOG0639 Transducin-like enhanc 97.4 0.002 4.4E-08 65.4 12.2 171 14-282 485-655 (705)
313 PF04762 IKI3: IKI3 family; I 97.4 0.042 9.2E-07 64.1 24.1 88 161-280 236-324 (928)
314 KOG0275 Conserved WD40 repeat- 97.3 0.003 6.5E-08 60.5 11.9 241 9-374 228-476 (508)
315 COG3386 Gluconolactonase [Carb 97.3 0.019 4.2E-07 57.7 18.5 78 263-365 113-193 (307)
316 KOG2110 Uncharacterized conser 97.3 0.016 3.4E-07 57.1 17.0 144 162-366 106-251 (391)
317 KOG0306 WD40-repeat-containing 97.3 0.011 2.5E-07 63.3 17.3 169 14-282 432-613 (888)
318 KOG0264 Nucleosome remodeling 97.3 0.037 8E-07 56.0 19.5 151 162-363 250-404 (422)
319 KOG4389 Acetylcholinesterase/B 97.3 0.00045 9.8E-09 70.5 6.1 125 465-596 121-256 (601)
320 PF05990 DUF900: Alpha/beta hy 97.3 0.0016 3.5E-08 63.0 9.8 112 479-596 16-138 (233)
321 KOG0306 WD40-repeat-containing 97.3 0.027 5.9E-07 60.6 19.1 197 161-392 433-650 (888)
322 KOG0284 Polyadenylation factor 97.2 0.0039 8.6E-08 61.9 11.7 241 43-364 139-381 (464)
323 PF07082 DUF1350: Protein of u 97.2 0.0038 8.1E-08 59.1 11.1 192 467-692 8-204 (250)
324 PF04762 IKI3: IKI3 family; I 97.2 0.23 5E-06 58.2 28.0 109 262-395 211-323 (928)
325 KOG0647 mRNA export protein (c 97.2 0.12 2.6E-06 49.7 20.7 99 43-196 28-126 (347)
326 KOG2919 Guanine nucleotide-bin 97.2 0.0068 1.5E-07 58.5 12.4 136 162-365 133-281 (406)
327 KOG0289 mRNA splicing factor [ 97.2 0.088 1.9E-06 53.1 20.5 143 43-279 304-451 (506)
328 KOG0319 WD40-repeat-containing 97.2 0.019 4.1E-07 61.6 16.8 207 48-375 25-232 (775)
329 TIGR02171 Fb_sc_TIGR02171 Fibr 97.2 0.048 1E-06 61.2 20.6 97 55-208 319-420 (912)
330 COG3490 Uncharacterized protei 97.2 0.15 3.2E-06 48.9 20.7 42 160-206 138-180 (366)
331 KOG0771 Prolactin regulatory e 97.1 0.0074 1.6E-07 60.4 12.7 168 162-393 166-341 (398)
332 KOG0268 Sof1-like rRNA process 97.1 0.002 4.4E-08 62.9 8.5 137 161-364 209-346 (433)
333 KOG0319 WD40-repeat-containing 97.1 0.026 5.6E-07 60.6 17.3 146 42-206 62-211 (775)
334 KOG2182 Hydrolytic enzymes of 97.1 0.002 4.3E-08 66.5 8.9 136 456-595 62-207 (514)
335 KOG2183 Prolylcarboxypeptidase 97.1 0.0024 5.1E-08 64.1 9.1 132 461-595 61-203 (492)
336 PLN02919 haloacid dehalogenase 97.1 0.065 1.4E-06 63.9 22.7 86 263-369 806-892 (1057)
337 KOG0310 Conserved WD40 repeat- 97.1 0.04 8.7E-07 56.3 17.6 229 43-397 69-300 (487)
338 KOG0650 WD40 repeat nucleolar 97.1 0.024 5.2E-07 59.3 16.2 271 41-406 399-678 (733)
339 PF15492 Nbas_N: Neuroblastoma 97.1 0.11 2.4E-06 49.8 19.4 55 48-114 3-61 (282)
340 KOG2048 WD40 repeat protein [G 97.1 0.12 2.7E-06 55.0 21.4 157 43-305 26-188 (691)
341 KOG0295 WD40 repeat-containing 97.1 0.043 9.2E-07 54.0 16.7 175 164-395 174-353 (406)
342 KOG2048 WD40 repeat protein [G 97.1 0.032 7E-07 59.3 17.1 164 41-302 381-549 (691)
343 KOG2106 Uncharacterized conser 97.0 0.073 1.6E-06 54.7 18.8 83 160-279 426-510 (626)
344 KOG0265 U5 snRNP-specific prot 97.0 0.036 7.9E-07 53.1 15.5 260 2-348 55-324 (338)
345 KOG1445 Tumor-specific antigen 97.0 0.005 1.1E-07 64.5 10.3 135 9-207 645-784 (1012)
346 KOG2919 Guanine nucleotide-bin 97.0 0.042 9.1E-07 53.2 15.7 113 145-302 163-282 (406)
347 KOG2565 Predicted hydrolases o 97.0 0.0044 9.5E-08 61.3 9.3 117 461-588 132-257 (469)
348 KOG3967 Uncharacterized conser 96.9 0.012 2.7E-07 53.3 10.9 143 434-590 62-222 (297)
349 COG3204 Uncharacterized protei 96.9 0.2 4.3E-06 48.5 19.5 93 262-377 182-275 (316)
350 KOG0288 WD40 repeat protein Ti 96.9 0.021 4.5E-07 57.1 13.1 115 249-392 330-447 (459)
351 KOG1524 WD40 repeat-containing 96.8 0.024 5.3E-07 58.4 13.6 77 162-276 126-202 (737)
352 COG3391 Uncharacterized conser 96.8 0.44 9.5E-06 50.2 23.9 211 45-374 76-292 (381)
353 KOG2110 Uncharacterized conser 96.8 0.023 5E-07 56.0 12.8 130 17-207 107-238 (391)
354 KOG0313 Microtubule binding pr 96.7 0.49 1.1E-05 47.2 21.2 128 185-376 262-389 (423)
355 PRK02888 nitrous-oxide reducta 96.7 0.15 3.2E-06 55.4 19.2 36 259-304 319-354 (635)
356 KOG0299 U3 snoRNP-associated p 96.7 0.095 2.1E-06 53.3 16.6 96 291-394 346-443 (479)
357 PF00450 Peptidase_S10: Serine 96.7 0.013 2.9E-07 62.9 11.6 134 461-597 22-183 (415)
358 KOG0303 Actin-binding protein 96.7 0.037 8E-07 55.0 13.1 152 38-279 77-234 (472)
359 PF06977 SdiA-regulated: SdiA- 96.7 0.15 3.2E-06 49.6 17.2 171 100-370 25-205 (248)
360 KOG0640 mRNA cleavage stimulat 96.6 0.057 1.2E-06 51.9 13.6 147 162-376 194-346 (430)
361 KOG1538 Uncharacterized conser 96.6 0.095 2.1E-06 55.7 16.2 58 44-116 14-73 (1081)
362 KOG2394 WD40 protein DMR-N9 [G 96.5 0.029 6.2E-07 58.0 11.8 77 256-363 286-362 (636)
363 COG4782 Uncharacterized protei 96.5 0.0093 2E-07 59.4 8.1 113 479-597 114-236 (377)
364 KOG0295 WD40 repeat-containing 96.5 0.17 3.6E-06 50.1 16.3 68 334-405 336-403 (406)
365 TIGR02171 Fb_sc_TIGR02171 Fibr 96.5 0.01 2.2E-07 66.2 9.1 59 225-306 330-390 (912)
366 KOG2394 WD40 protein DMR-N9 [G 96.4 0.02 4.3E-07 59.2 9.7 65 91-206 285-351 (636)
367 KOG1920 IkappaB kinase complex 96.4 1.1 2.5E-05 51.6 23.9 88 162-281 222-310 (1265)
368 KOG0264 Nucleosome remodeling 96.4 0.31 6.7E-06 49.6 17.7 141 161-364 199-348 (422)
369 KOG4388 Hormone-sensitive lipa 96.4 0.0088 1.9E-07 62.4 7.1 90 480-580 395-489 (880)
370 PF13360 PQQ_2: PQQ-like domai 96.4 0.89 1.9E-05 44.2 21.4 61 343-413 173-233 (238)
371 COG3204 Uncharacterized protei 96.3 0.68 1.5E-05 45.0 18.7 62 38-110 81-142 (316)
372 KOG1539 WD repeat protein [Gen 96.3 0.19 4.1E-06 55.0 16.6 85 160-281 554-638 (910)
373 KOG0283 WD40 repeat-containing 96.3 0.16 3.4E-06 55.6 16.0 34 162-197 432-465 (712)
374 PF06977 SdiA-regulated: SdiA- 96.2 0.26 5.6E-06 47.9 15.9 56 43-109 22-77 (248)
375 PF08386 Abhydrolase_4: TAP-li 96.1 0.011 2.4E-07 48.9 5.4 59 648-711 34-92 (103)
376 KOG0303 Actin-binding protein 96.1 0.57 1.2E-05 47.0 17.8 74 185-305 133-207 (472)
377 COG3319 Thioesterase domains o 96.1 0.022 4.7E-07 55.4 8.1 100 482-596 1-104 (257)
378 KOG0307 Vesicle coat complex C 96.1 0.074 1.6E-06 60.2 13.0 183 161-408 138-327 (1049)
379 KOG2106 Uncharacterized conser 96.1 0.54 1.2E-05 48.7 17.6 108 294-408 370-477 (626)
380 COG1075 LipA Predicted acetylt 96.0 0.023 5E-07 58.5 8.1 100 483-596 61-165 (336)
381 COG3490 Uncharacterized protei 96.0 1 2.2E-05 43.4 18.0 204 70-374 51-270 (366)
382 PF11187 DUF2974: Protein of u 96.0 0.014 3E-07 55.9 5.9 49 545-593 69-121 (224)
383 KOG1009 Chromatin assembly com 95.9 0.21 4.6E-06 50.1 13.9 63 185-282 125-187 (434)
384 KOG4378 Nuclear protein COP1 [ 95.9 0.77 1.7E-05 47.4 18.0 136 162-367 143-282 (673)
385 PF05057 DUF676: Putative seri 95.9 0.014 2.9E-07 56.1 5.7 22 559-580 77-98 (217)
386 COG1770 PtrB Protease II [Amin 95.9 2.1 4.5E-05 46.6 21.9 66 43-120 129-197 (682)
387 KOG0316 Conserved WD40 repeat- 95.8 1.6 3.5E-05 40.8 20.3 101 43-207 18-120 (307)
388 KOG1332 Vesicle coat complex C 95.8 1.7 3.7E-05 40.9 18.3 60 335-394 210-274 (299)
389 KOG1063 RNA polymerase II elon 95.8 0.47 1E-05 51.0 16.6 117 93-281 521-639 (764)
390 PF04053 Coatomer_WDAD: Coatom 95.8 0.36 7.9E-06 51.4 16.1 38 225-281 127-165 (443)
391 PF02450 LCAT: Lecithin:choles 95.8 0.031 6.7E-07 58.9 8.0 83 498-595 66-160 (389)
392 KOG3724 Negative regulator of 95.7 0.027 5.8E-07 61.4 7.4 49 539-588 154-209 (973)
393 TIGR03712 acc_sec_asp2 accesso 95.7 0.47 1E-05 49.6 16.0 123 460-602 273-397 (511)
394 PRK10252 entF enterobactin syn 95.7 0.051 1.1E-06 67.8 11.3 100 481-594 1068-1170(1296)
395 PF06433 Me-amine-dh_H: Methyl 95.7 0.3 6.5E-06 49.0 14.1 158 14-231 155-319 (342)
396 KOG0302 Ribosome Assembly prot 95.7 0.46 1E-05 47.3 15.0 140 162-364 234-379 (440)
397 KOG1551 Uncharacterized conser 95.6 0.063 1.4E-06 50.7 8.2 102 479-587 111-222 (371)
398 KOG1539 WD repeat protein [Gen 95.5 0.15 3.3E-06 55.8 11.9 90 224-363 556-646 (910)
399 KOG0316 Conserved WD40 repeat- 95.4 0.95 2.1E-05 42.2 15.0 162 162-375 39-223 (307)
400 KOG4328 WD40 protein [Function 95.4 0.39 8.5E-06 49.0 13.6 169 161-395 209-388 (498)
401 KOG1282 Serine carboxypeptidas 95.3 0.17 3.7E-06 53.5 11.3 138 458-597 52-215 (454)
402 KOG1007 WD repeat protein TSSC 95.3 0.92 2E-05 43.7 14.8 231 4-282 31-280 (370)
403 PLN03016 sinapoylglucose-malat 95.2 0.14 3E-06 54.5 10.7 62 649-712 348-430 (433)
404 KOG0290 Conserved WD40 repeat- 95.2 1.8 3.9E-05 41.8 16.5 136 163-363 174-318 (364)
405 KOG0641 WD40 repeat protein [G 95.2 2.6 5.6E-05 39.0 17.8 72 43-122 33-115 (350)
406 KOG1332 Vesicle coat complex C 95.2 1.6 3.5E-05 41.1 15.8 38 335-374 259-296 (299)
407 KOG4378 Nuclear protein COP1 [ 95.2 0.69 1.5E-05 47.7 14.7 96 162-304 187-283 (673)
408 KOG4283 Transcription-coupled 95.1 3.5 7.5E-05 40.0 19.0 86 162-282 124-210 (397)
409 PF13360 PQQ_2: PQQ-like domai 95.1 2.4 5.3E-05 41.1 18.7 28 341-371 209-236 (238)
410 KOG0277 Peroxisomal targeting 95.1 0.26 5.7E-06 46.3 10.5 234 15-370 37-272 (311)
411 COG4257 Vgb Streptogramin lyas 95.0 1.4 2.9E-05 42.4 15.1 175 161-410 82-262 (353)
412 KOG1007 WD repeat protein TSSC 95.0 2.3 5E-05 41.0 16.5 143 186-395 126-277 (370)
413 PLN02209 serine carboxypeptida 94.9 0.23 4.9E-06 52.9 11.1 61 649-711 352-433 (437)
414 KOG1963 WD40 repeat protein [G 94.9 1 2.2E-05 49.9 16.0 95 45-197 208-306 (792)
415 KOG0269 WD40 repeat-containing 94.8 0.18 3.9E-06 54.8 10.0 139 162-365 156-296 (839)
416 KOG0641 WD40 repeat protein [G 94.8 3.3 7.3E-05 38.3 17.2 140 161-363 203-349 (350)
417 KOG0269 WD40 repeat-containing 94.8 0.39 8.4E-06 52.3 12.3 125 12-197 152-277 (839)
418 KOG0268 Sof1-like rRNA process 94.8 0.27 5.9E-06 48.6 10.2 144 43-281 188-336 (433)
419 KOG0285 Pleiotropic regulator 94.7 5.1 0.00011 40.0 19.4 183 41-276 150-335 (460)
420 KOG0310 Conserved WD40 repeat- 94.7 2 4.4E-05 44.4 16.6 139 162-370 90-230 (487)
421 KOG1523 Actin-related protein 94.6 5.1 0.00011 39.4 18.5 66 43-117 11-76 (361)
422 KOG0302 Ribosome Assembly prot 94.5 1.5 3.3E-05 43.9 14.6 117 100-302 261-379 (440)
423 KOG2521 Uncharacterized conser 94.5 1.4 3.1E-05 44.8 15.0 222 478-713 36-290 (350)
424 KOG1963 WD40 repeat protein [G 94.4 5.8 0.00013 44.3 20.2 72 26-117 240-313 (792)
425 PF07519 Tannase: Tannase and 94.3 0.15 3.4E-06 54.9 8.4 129 463-598 15-153 (474)
426 KOG1523 Actin-related protein 94.3 2.2 4.7E-05 41.9 14.8 63 42-116 55-120 (361)
427 PF01764 Lipase_3: Lipase (cla 94.3 0.11 2.3E-06 46.0 6.0 53 541-595 47-106 (140)
428 KOG2321 WD40 repeat protein [G 94.2 4.1 8.9E-05 43.2 17.7 116 262-410 230-346 (703)
429 KOG0646 WD40 repeat protein [G 94.1 0.78 1.7E-05 47.0 12.1 217 43-305 82-311 (476)
430 PRK02888 nitrous-oxide reducta 94.0 6.5 0.00014 43.2 19.6 111 262-411 236-352 (635)
431 cd00741 Lipase Lipase. Lipase 94.0 0.13 2.9E-06 46.2 6.1 39 543-583 13-51 (153)
432 KOG1063 RNA polymerase II elon 93.9 0.3 6.5E-06 52.5 9.2 120 185-364 527-649 (764)
433 PF11768 DUF3312: Protein of u 93.9 3 6.5E-05 44.6 16.5 140 11-231 179-328 (545)
434 PF11288 DUF3089: Protein of u 93.7 0.081 1.8E-06 49.3 4.2 71 510-581 45-116 (207)
435 KOG0650 WD40 repeat nucleolar 93.7 0.91 2E-05 48.1 11.9 85 162-282 587-682 (733)
436 PRK13614 lipoprotein LpqB; Pro 93.5 4.4 9.6E-05 44.6 17.6 56 44-114 344-399 (573)
437 KOG0294 WD40 repeat-containing 93.5 2.8 6.1E-05 41.0 14.0 135 4-206 51-187 (362)
438 PRK11138 outer membrane biogen 93.4 12 0.00027 39.6 22.3 64 343-413 293-356 (394)
439 KOG1920 IkappaB kinase complex 93.4 2.5 5.4E-05 49.0 15.6 64 183-282 68-131 (1265)
440 smart00824 PKS_TE Thioesterase 93.3 0.52 1.1E-05 44.7 9.4 84 497-593 13-100 (212)
441 KOG1538 Uncharacterized conser 93.3 1.2 2.6E-05 47.8 12.2 59 185-279 14-72 (1081)
442 KOG0307 Vesicle coat complex C 93.2 0.36 7.8E-06 54.9 8.9 142 162-363 184-327 (1049)
443 KOG0292 Vesicle coat complex C 93.2 18 0.00039 40.9 22.2 98 2-119 59-158 (1202)
444 TIGR03300 assembly_YfgL outer 93.1 13 0.00029 39.1 25.7 60 344-413 241-300 (377)
445 KOG0647 mRNA export protein (c 92.9 2 4.3E-05 41.8 12.0 119 180-366 24-146 (347)
446 PF02089 Palm_thioest: Palmito 92.9 0.3 6.5E-06 47.8 6.8 107 479-594 4-115 (279)
447 KOG0277 Peroxisomal targeting 92.8 2.6 5.7E-05 39.9 12.4 173 160-395 36-209 (311)
448 PLN02606 palmitoyl-protein thi 92.6 1.2 2.6E-05 44.1 10.5 102 480-593 26-130 (306)
449 TIGR02604 Piru_Ver_Nterm putat 92.4 7 0.00015 41.0 17.1 73 185-280 125-202 (367)
450 KOG4328 WD40 protein [Function 92.4 3.4 7.5E-05 42.5 13.6 208 43-361 187-397 (498)
451 PF03022 MRJP: Major royal jel 92.4 5.5 0.00012 40.0 15.4 58 337-397 190-255 (287)
452 KOG1408 WD40 repeat protein [F 92.3 1.3 2.7E-05 48.1 10.9 145 45-281 40-186 (1080)
453 KOG0270 WD40 repeat-containing 92.3 9.6 0.00021 39.2 16.5 145 161-368 265-409 (463)
454 TIGR03300 assembly_YfgL outer 92.3 17 0.00036 38.3 24.4 64 343-413 278-341 (377)
455 KOG2041 WD40 repeat protein [G 92.3 2.2 4.8E-05 46.3 12.6 64 41-117 70-136 (1189)
456 PLN02633 palmitoyl protein thi 91.8 1.7 3.6E-05 43.2 10.5 104 479-594 24-130 (314)
457 cd00519 Lipase_3 Lipase (class 91.8 0.31 6.7E-06 47.3 5.6 52 542-595 112-168 (229)
458 COG2939 Carboxypeptidase C (ca 91.7 0.98 2.1E-05 47.6 9.3 110 465-579 87-217 (498)
459 PLN02517 phosphatidylcholine-s 91.7 0.32 7E-06 52.3 5.9 75 498-579 157-232 (642)
460 PRK13614 lipoprotein LpqB; Pro 91.6 25 0.00055 38.9 20.3 89 262-373 435-526 (573)
461 PLN02454 triacylglycerol lipas 91.5 0.55 1.2E-05 48.7 7.1 55 541-595 209-271 (414)
462 PRK13615 lipoprotein LpqB; Pro 91.4 11 0.00025 41.3 17.4 160 46-304 337-505 (557)
463 KOG3914 WD repeat protein WDR4 91.4 5.8 0.00013 40.2 13.8 38 162-205 132-169 (390)
464 PF11768 DUF3312: Protein of u 91.1 8.7 0.00019 41.2 15.5 82 17-115 237-318 (545)
465 PF07519 Tannase: Tannase and 91.1 0.45 9.7E-06 51.4 6.4 65 648-712 353-426 (474)
466 COG2319 FOG: WD40 repeat [Gene 90.6 24 0.00052 36.9 21.2 35 162-197 178-212 (466)
467 KOG2041 WD40 repeat protein [G 90.5 11 0.00025 41.2 15.6 23 261-283 259-281 (1189)
468 KOG1408 WD40 repeat protein [F 90.3 8.9 0.00019 42.0 14.7 111 145-302 601-714 (1080)
469 TIGR02604 Piru_Ver_Nterm putat 90.2 6.6 0.00014 41.2 14.2 33 162-196 164-196 (367)
470 KOG0292 Vesicle coat complex C 90.0 33 0.00071 39.0 18.9 205 43-364 10-237 (1202)
471 KOG4547 WD40 repeat-containing 89.7 20 0.00042 38.4 16.5 97 160-305 78-176 (541)
472 KOG4499 Ca2+-binding protein R 89.7 5.7 0.00012 37.4 11.2 99 249-371 146-247 (310)
473 KOG0285 Pleiotropic regulator 89.7 11 0.00023 37.8 13.6 165 161-400 172-341 (460)
474 PLN02408 phospholipase A1 89.7 0.52 1.1E-05 48.2 5.1 40 541-580 181-220 (365)
475 KOG3621 WD40 repeat-containing 89.2 20 0.00043 39.4 16.3 63 43-113 77-141 (726)
476 PRK13613 lipoprotein LpqB; Pro 89.1 25 0.00053 39.3 17.8 86 262-369 456-543 (599)
477 PRK13613 lipoprotein LpqB; Pro 89.0 25 0.00054 39.3 17.8 167 44-305 364-543 (599)
478 KOG2100 Dipeptidyl aminopeptid 88.9 44 0.00095 38.7 20.3 66 48-118 102-169 (755)
479 PLN02571 triacylglycerol lipas 88.9 0.62 1.3E-05 48.4 5.0 40 541-580 207-246 (413)
480 PF03283 PAE: Pectinacetyleste 88.8 0.25 5.3E-06 51.1 2.1 38 541-578 137-174 (361)
481 KOG0321 WD40 repeat-containing 88.7 18 0.00038 39.2 15.3 36 162-197 122-158 (720)
482 KOG1036 Mitotic spindle checkp 88.6 26 0.00057 34.5 21.7 94 43-196 14-107 (323)
483 KOG2369 Lecithin:cholesterol a 88.2 0.85 1.8E-05 47.6 5.4 75 498-583 125-205 (473)
484 KOG0308 Conserved WD40 repeat- 88.2 6.2 0.00013 42.6 11.7 42 250-302 203-244 (735)
485 PRK11138 outer membrane biogen 88.1 39 0.00085 35.8 22.5 59 345-413 257-315 (394)
486 PLN02324 triacylglycerol lipas 88.0 0.78 1.7E-05 47.6 5.1 39 541-579 196-234 (415)
487 PF06850 PHB_depo_C: PHB de-po 87.6 0.87 1.9E-05 41.6 4.5 65 649-713 135-202 (202)
488 KOG0646 WD40 repeat protein [G 87.1 15 0.00031 38.2 13.1 34 162-197 103-137 (476)
489 PLN02802 triacylglycerol lipas 87.0 0.94 2E-05 48.1 5.1 40 541-580 311-350 (509)
490 PF09994 DUF2235: Uncharacteri 86.7 5.5 0.00012 39.8 10.2 41 539-580 72-112 (277)
491 KOG1036 Mitotic spindle checkp 86.6 22 0.00048 34.9 13.4 89 99-270 16-104 (323)
492 PLN00413 triacylglycerol lipas 86.4 1.2 2.5E-05 47.0 5.3 37 541-579 267-303 (479)
493 KOG2111 Uncharacterized conser 86.1 4.3 9.4E-05 39.8 8.5 89 15-119 158-249 (346)
494 KOG0313 Microtubule binding pr 86.0 17 0.00036 36.8 12.6 102 40-206 258-364 (423)
495 PF06259 Abhydrolase_8: Alpha/ 85.6 2.2 4.7E-05 39.1 6.1 52 541-593 91-143 (177)
496 PF07995 GSDH: Glucose / Sorbo 85.5 47 0.001 34.2 16.7 184 42-298 1-211 (331)
497 PF01083 Cutinase: Cutinase; 85.3 1.5 3.3E-05 40.5 5.0 51 541-593 64-120 (179)
498 COG4287 PqaA PhoPQ-activated p 85.3 1.4 2.9E-05 44.2 4.8 147 541-694 214-372 (507)
499 PLN02162 triacylglycerol lipas 85.3 1.4 3.1E-05 46.3 5.2 37 541-579 261-297 (475)
500 PF13449 Phytase-like: Esteras 84.8 50 0.0011 33.9 21.4 144 47-231 89-250 (326)
No 1
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-48 Score=430.11 Aligned_cols=588 Identities=22% Similarity=0.303 Sum_probs=408.2
Q ss_pred cccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEE
Q 005093 3 SISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKE 82 (715)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~ 82 (715)
..+..+...+.+.+.+|+.+... ...++ .-+.+..+.|||||+.++|..+.+....++|.+..+| .+
T Consensus 30 i~~~~~~~~~~~~~~~~~~d~~~----~~~~~------~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g---~~ 96 (620)
T COG1506 30 ILTGLDFLKPLYKSSLWVSDGKT----VRLLT------FGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG---LI 96 (620)
T ss_pred eeccccccccccccceEEEeccc----ccccc------cCCcccccccCCCCCEEEEEeccCCCcceEEEEecCC---ce
Confidence 34445677788888999854433 11111 1256889999999999999985554567888887444 22
Q ss_pred EecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCc
Q 005093 83 FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 162 (715)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (715)
......+ +...|+|+|+.+++......... .+. +......-..|.. +.+ ..+.
T Consensus 97 ~~~~~~v----------~~~~~~~~g~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~--~~g---~~~~ 149 (620)
T COG1506 97 TKTAFGV----------SDARWSPDGDRIAFLTAEGASKR---------DGG---DHLFVDRLPVWFD--GRG---GERS 149 (620)
T ss_pred eeeeccc----------ccceeCCCCCeEEEEeccccccc---------CCc---eeeeecccceeec--CCC---Cccc
Confidence 2223344 68999999999999433221110 000 0000000000110 111 2358
Q ss_pred eEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhh
Q 005093 163 SLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE 242 (715)
Q Consensus 163 ~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (715)
.++++|.++ ....+ ......+..+++.++++. ++....... ... .....+....
T Consensus 150 ~l~~~d~~~-~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~------~~~~~~~~~~----------- 203 (620)
T COG1506 150 DLYVVDIES-KLIKL--GLGNLDVVSFATDGDGRL----VASIRLDDD--ADP------WVTNLYVLIE----------- 203 (620)
T ss_pred ceEEEccCc-ccccc--cCCCCceeeeeeCCCCce----eEEeeeccc--cCC------ceEeeEEEec-----------
Confidence 899999977 44444 455556666677777775 555543221 000 1112333332
Q ss_pred hhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecC
Q 005093 243 LKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA 322 (715)
Q Consensus 243 ~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~ 322 (715)
.++....++........+.|.+||+.+++.+..... .......+++++...+..... .....
T Consensus 204 ------~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~-------~~~~~-- 265 (620)
T COG1506 204 ------GNGELESLTPGEGSISKLAFDADGKSIALLGTESDR---GLAEGDFILLLDGELGEVDGD-------LSSGD-- 265 (620)
T ss_pred ------CCCceEEEcCCCceeeeeeeCCCCCeeEEeccCCcc---CccccceEEEEecccccccee-------eccCC--
Confidence 467888888888889999999999999999887641 123344566666222222110 00000
Q ss_pred CCCCccccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCC
Q 005093 323 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDV 401 (715)
Q Consensus 323 ~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p 401 (715)
. .. +.....+.-++..+++.... .+...++.++...+....+....+ ....|+.+++.+++..+++..|
T Consensus 266 --~-~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~--~v~~f~~~~~~~~~~~s~~~~p 335 (620)
T COG1506 266 --D-TR-----GAWAVEGGLDGDGLLFIATDGGGSSPLFRVDDLGGGVEGLSGDDG--GVPGFDVDGRKLALAYSSPTEP 335 (620)
T ss_pred --c-cc-----CcHHhccccCCCcEEEEEecCCCceEEEEEeccCCceeeecCCCc--eEEEEeeCCCEEEEEecCCCCc
Confidence 0 00 01111122345557776665 677778888765555554544434 4467777999999999999999
Q ss_pred CeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCC
Q 005093 402 PQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCD 481 (715)
Q Consensus 402 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~ 481 (715)
+++++.+.+ .+ .++ +..+. ..+....+ .. ...+++...+|.++++++++|.++++.+++
T Consensus 336 ~~i~~~~~~-~~--~~~---------~~~~~---~~~~~~~~-----~~-~e~~~~~~~dG~~i~~~l~~P~~~~~~k~y 394 (620)
T COG1506 336 PEIYLYDRG-EE--AKL---------TSSNN---SGLKKVKL-----AE-PEPVTYKSNDGETIHGWLYKPPGFDPRKKY 394 (620)
T ss_pred cceEEEcCC-Cc--eEE---------eeccc---cccccccc-----CC-ceEEEEEcCCCCEEEEEEecCCCCCCCCCC
Confidence 999998862 11 111 01111 01111111 00 112356677899999999999999888889
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
|+||++||||.......+...++.|+.+||+|+.+|+||+.|||.+|.+....+++..+.+|+.++++++.+.+.+|++|
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 474 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPER 474 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHH
Confidence 99999999998887778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCch
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI 641 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 641 (715)
|+|+|+|+||+|+++++++.| +|++++...+.+++..+........+....... ..+.+ +.+.+...||+
T Consensus 475 i~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~sp~ 544 (620)
T COG1506 475 IGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENG--------GGPPE-DREKYEDRSPI 544 (620)
T ss_pred eEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhC--------CCccc-ChHHHHhcChh
Confidence 999999999999999999876 899999999988877665544433222111111 11112 66889999999
Q ss_pred hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 642 SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 642 ~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+++++++|+|+|||+.|.+||.+|+++++++|+.+|+++++++||+++|++..+++....++++++||+++++
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=2.5e-42 Score=383.04 Aligned_cols=529 Identities=14% Similarity=0.117 Sum_probs=357.5
Q ss_pred ceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
.....|||||++|||..+.++ +..+++.+. .+|.... ..++... ..+.|++||+.|+|........
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~-~~i~~~~----------~~~~w~~D~~~~~y~~~~~~~~- 196 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYP-ELLDNVE----------PSFVWANDSWTFYYVRKHPVTL- 196 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCC-ccccCcc----------eEEEEeeCCCEEEEEEecCCCC-
Confidence 566789999999999987653 445677777 5564210 0111111 3589999999999987642100
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC--ceEeecCCCCCCccceEEEec-CCCCCc
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--EVQAVKGIPKSLSVGQVVWAP-LNEGLH 199 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g--~~~~l~~~~~~~~~~~~~~sp-dg~~~~ 199 (715)
...+||++++.++ +.+.+. ...+....-..|.+ |++.
T Consensus 197 -------------------------------------~~~~v~~h~lgt~~~~d~lv~-~e~~~~~~~~~~~s~d~~~-- 236 (686)
T PRK10115 197 -------------------------------------LPYQVWRHTIGTPASQDELVY-EEKDDTFYVSLHKTTSKHY-- 236 (686)
T ss_pred -------------------------------------CCCEEEEEECCCChhHCeEEE-eeCCCCEEEEEEEcCCCCE--
Confidence 2378999999988 444452 11111111123444 8887
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-CCCccccceeEcCCCCeEEEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l~~~ 278 (715)
++...... ..+++++++.+ ...+....+. ........+ ...+..+++.
T Consensus 237 --l~i~~~~~------------~~~~~~l~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~~~~ly~~ 285 (686)
T PRK10115 237 --VVIHLASA------------TTSEVLLLDAE---------------LADAEPFVFLPRRKDHEYSL--DHYQHRFYLR 285 (686)
T ss_pred --EEEEEECC------------ccccEEEEECc---------------CCCCCceEEEECCCCCEEEE--EeCCCEEEEE
Confidence 66444221 22467777641 0233333332 222222222 2345667777
Q ss_pred ecCCCCCCCCccccceeEeeecCC-CCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
++.. .....|..+++.+ ++.+.+ +....+. .+..+.+. ++.|+++...++..
T Consensus 286 tn~~-------~~~~~l~~~~~~~~~~~~~l----------~~~~~~~--------~i~~~~~~--~~~l~~~~~~~g~~ 338 (686)
T PRK10115 286 SNRH-------GKNFGLYRTRVRDEQQWEEL----------IPPRENI--------MLEGFTLF--TDWLVVEERQRGLT 338 (686)
T ss_pred EcCC-------CCCceEEEecCCCcccCeEE----------ECCCCCC--------EEEEEEEE--CCEEEEEEEeCCEE
Confidence 7653 3345688888763 111111 1111111 12234454 55798999999999
Q ss_pred EEEEEECCCCcEEEecC-CCCCceeEEEe--ecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhh
Q 005093 358 VIISVNVSSGELLRITP-AESNFSWSLLT--LDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKV 434 (715)
Q Consensus 358 ~l~~~d~~tg~~~~l~~-~~~~~~~~~~s--~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (715)
+|+.+++.+++...|.. .........++ .+++.+++..+++..|+++|.+++.+++ ... ++..+.
T Consensus 339 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~-~~~---------l~~~~~-- 406 (686)
T PRK10115 339 SLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE-RRV---------LKQTEV-- 406 (686)
T ss_pred EEEEEcCCCCceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc-EEE---------EEecCC--
Confidence 99999988777777763 22211222233 4567899999999999999999987543 111 111110
Q ss_pred hhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEE
Q 005093 435 KSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLL 514 (715)
Q Consensus 435 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi 514 (715)
..+....+....+ .+++.||.+|+++++.+++....++.|+||++|||+.......|....+.|+++||+|+
T Consensus 407 -~~~~~~~~~~e~v-------~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~ 478 (686)
T PRK10115 407 -PGFDAANYRSEHL-------WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYA 478 (686)
T ss_pred -CCcCccccEEEEE-------EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEE
Confidence 0011112222222 55678999999966665543345677999999999998877889888899999999999
Q ss_pred EEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 515 IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 515 ~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
.+++||+++||+.|.+.....++..+++|+++++++|++++.+|++|++++|.|+||+++.+++.++|++|+|+|+..|+
T Consensus 479 ~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 479 IVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred EEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 99999999999999987777777788999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCC-ceeeeccCCCCCCCCCCCCC-hhhHHHHHhcCchhhccCCCCc-EEEEeeCCCCcCCchHHHHHH
Q 005093 595 CNLALMVGTTDIPD-WCYVESYGSKGKDSFTESPS-VEDLTRFHSKSPISHISKVKTP-TIFLLGAQDLRVPVSNGLQYA 671 (715)
Q Consensus 595 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~P-~Lii~G~~D~~v~~~~~~~~~ 671 (715)
+|+.........+. +.....+|. |. .+..+.+..+||+.++.+++.| +||+||.+|.+||+.++.+++
T Consensus 559 ~D~~~~~~~~~~p~~~~~~~e~G~---------p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~ 629 (686)
T PRK10115 559 VDVVTTMLDESIPLTTGEFEEWGN---------PQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWV 629 (686)
T ss_pred hhHhhhcccCCCCCChhHHHHhCC---------CCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHH
Confidence 99887654333332 222222332 32 3445666789999999999989 678899999999999999999
Q ss_pred HHHHHcCCcEEEEEe---CCCCccCCCCCchHHHHH---HHHHHHHHhc
Q 005093 672 RALREKGVETKVIVF---PNDVHGIERPQSDFESFL---NIGLWFKKYC 714 (715)
Q Consensus 672 ~~l~~~g~~~~~~~~---~~~~H~~~~~~~~~~~~~---~i~~wl~~~l 714 (715)
.+|++++.+++++++ +++||+. ..++...++ ....|+-..+
T Consensus 630 a~Lr~~~~~~~~vl~~~~~~~GHg~--~~~r~~~~~~~A~~~aFl~~~~ 676 (686)
T PRK10115 630 AKLRELKTDDHLLLLCTDMDSGHGG--KSGRFKSYEGVAMEYAFLIALA 676 (686)
T ss_pred HHHHhcCCCCceEEEEecCCCCCCC--CcCHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888 9999984 333334433 4466665543
No 3
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-34 Score=316.73 Aligned_cols=592 Identities=19% Similarity=0.249 Sum_probs=375.7
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEec------
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV------ 85 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 85 (715)
.+....++.+++++.. + .+...+-.......|||.|+.|+|+.+++ ++.-. ......+++..
T Consensus 124 s~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~wsp~~~~l~yv~~~n-----iy~~~~~~~~~~~~~~~~~~~~i 192 (755)
T KOG2100|consen 124 SYTAKYHLYDLNTGEK----L--HPPEYEGSKIQYASWSPLGNDLAYVLHNN-----IYYQSSEEDEDVRIVSNGGEDVI 192 (755)
T ss_pred eeEEEEEEEEcCCCCc----c--cCcccCCCeeEEEEEcCCCCEEEEEEecc-----cccccCcCCCceEEEecCCCceE
Confidence 3445555666666551 0 11111123357899999999999998865 22111 12222222221
Q ss_pred CccccccccCCCcc---cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCc
Q 005093 86 PQTVHGSVYADGWF---EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 162 (715)
Q Consensus 86 ~~~~~~~~~~~~~~---~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (715)
-.+..+++|.++.+ ....|||||.+++|.......-. ......-......+. ...+.|... |. .....
T Consensus 193 ~ng~~Dw~yeeEv~~~~~a~wwsp~g~~la~~~~~dt~V~-~~~~~~~~~~~~yp~----~~~~~ypk~-g~---~np~v 263 (755)
T KOG2100|consen 193 FNGKPDWIYEEEVLSSDSAIWWSPDGDRLAYASFNDTKVE-TINLPGYTDDDQYPK----STNFHYPKA-GA---PNPAV 263 (755)
T ss_pred EcCCCCceeehhhcccCccceeCCCCceeEEEEecccccc-eEEeccccccccCcc----cceeecCCC-CC---CCCeE
Confidence 12445667775533 46779999999999876553311 111100000000000 001112111 22 11335
Q ss_pred eEEEEEccCCceEeec----CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 163 SLFVININSGEVQAVK----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 163 ~l~~~~~~~g~~~~l~----~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
.|+++|+.+.....+. ............|.-+.+ +++.. .++.+.+-...++.
T Consensus 264 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-----~~~~~-------------~~r~~~~~~~~~cd----- 320 (755)
T KOG2100|consen 264 SLFVVDLHDPPRLGIPPPTNQRSGEYYVTNVKWDTTEK-----VLVVW-------------TNREQNISVETLCD----- 320 (755)
T ss_pred EEEEEeCCCceeeccCCccccccCceEEEEEEEecCcc-----EEEEE-------------EccCCCeeeeEEec-----
Confidence 7888886555443321 011122344566766644 44332 11222233332210
Q ss_pred hhhhhhccCCCCCC--ceecCCCCc-c----ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC-CCCCccc
Q 005093 239 SELELKESSSEDLP--VVNLTESIS-S----AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFSSLE 310 (715)
Q Consensus 239 ~~~~~~~~~~~~~~--~~~lt~~~~-~----~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~-~~~~lt~ 310 (715)
..+. ......... + ...|.++.|+....+...... ....++..+....+ ..+.+|.
T Consensus 321 ----------~~~~~~~~~~~~~~~~W~~~~~~~~~~~~d~~~~~~~~~~~~------~~~~hi~~~~~~~~~~~~~lt~ 384 (755)
T KOG2100|consen 321 ----------TPGICRVVYEESSDGGWVEHQNVEPVFSSDGSSYLKVDSVSD------GGYNHIAYLKLSNGSEPRMLTS 384 (755)
T ss_pred ----------CcccceeeEeccccccccccccccceEeecCCceeEEEeecc------CCEEEEEEEEcCCCCccccccc
Confidence 1111 111111111 1 234778888865555554432 11567777776666 5566777
Q ss_pred ceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee--CCeeEEEEEECCCCcEEEecCCCC----CceeEEE
Q 005093 311 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQVIISVNVSSGELLRITPAES----NFSWSLL 384 (715)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~--~~~~~l~~~d~~tg~~~~l~~~~~----~~~~~~~ 384 (715)
+.+++..+ +.|..+++.++|.+.. .+..+||.+++.++....++.... .+....+
T Consensus 385 g~w~v~~i-------------------~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~~~~lt~~~~~~~~~~~~~~~ 445 (755)
T KOG2100|consen 385 GNWEVTSI-------------------LGYDKDSNRIYFDAYEEDPSERHLYSISLGSGTVESLTCSLITGPCTYLSVSF 445 (755)
T ss_pred cceEEEEe-------------------ccccCCCceEEEEecCCCCCceEEEEEEccccccccccccCCCCcceEEEEec
Confidence 77665432 2345677889998886 467789999999888887765544 2222345
Q ss_pred eecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCce
Q 005093 385 TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKP 464 (715)
Q Consensus 385 s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~ 464 (715)
+.....++..++++..|.. .+-...+.. ... +.. | +.|+.+.+.+.... +|...+ ....-+|..
T Consensus 446 ~~~~~~~v~~~~gP~~p~~-~~~~~~~~~-~~~--~~~----L-e~n~~~~~~~~~~~-----~p~~~~--~~i~~~~~~ 509 (755)
T KOG2100|consen 446 SKSAKYYVLSCSGPKVPDG-QLTRHSSKN-SKT--IVV----L-ETNEELKKTIENVA-----LPIVEF--GKIEIDGIT 509 (755)
T ss_pred CCcccEEEEEccCCCCCcc-eeecccccc-ceE--EEE----e-ccChhhHHHhhccc-----CCccee--EEEEeccEE
Confidence 5556777788888888754 221222221 111 111 1 34454444443222 221111 111127889
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc---cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~---~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
....+++|+++++.+++|++|.+|||+.+.... ........+...|++|+.+|+||++++|..+...+++++|..++
T Consensus 510 ~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev 589 (755)
T KOG2100|consen 510 ANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEV 589 (755)
T ss_pred EEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcch
Confidence 999999999999999999999999999743221 22223345689999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCC-CceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCC
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP-DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 620 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (715)
+|+..+++++.+++.+|.+||+|+|+|+||++++.++...+ +.|+|+++++|+.++. +..... .
T Consensus 590 ~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~--------------t 654 (755)
T KOG2100|consen 590 KDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTY--------------T 654 (755)
T ss_pred HHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccc--------------c
Confidence 99999999999999999999999999999999999999887 7899999999999876 332221 1
Q ss_pred CCCCCCCChhhHHHHHhcCchhhccCCCCcE-EEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch
Q 005093 621 DSFTESPSVEDLTRFHSKSPISHISKVKTPT-IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD 699 (715)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~-Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 699 (715)
+++++.+. .+...|.+.++...+..++.|. |++||+.|..|+++++.+++++|+.+|+++++++||++.|++......
T Consensus 655 erymg~p~-~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~ 733 (755)
T KOG2100|consen 655 ERYMGLPS-ENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVI 733 (755)
T ss_pred HhhcCCCc-cccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccch
Confidence 22334443 2333378888888888888775 999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHhc
Q 005093 700 FESFLNIGLWFKKYC 714 (715)
Q Consensus 700 ~~~~~~i~~wl~~~l 714 (715)
...+..+..||+..+
T Consensus 734 ~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 734 SHLYEKLDRFLRDCF 748 (755)
T ss_pred HHHHHHHHHHHHHHc
Confidence 789999999998654
No 4
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.3e-33 Score=280.05 Aligned_cols=340 Identities=19% Similarity=0.263 Sum_probs=262.3
Q ss_pred CCEEEEEeeeCC--eeEEEEEECC-CCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCcceee
Q 005093 344 GCTMLLSSIWGS--SQVIISVNVS-SGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSW 420 (715)
Q Consensus 344 g~~l~~~~~~~~--~~~l~~~d~~-tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~ 420 (715)
.+.+||....+. ..+||.+... .|+..+++...-.++ ..++.+=+.++...++...|+++.++.+...++.
T Consensus 515 ~~LVYf~gt~d~PlE~hLyvvsye~~g~~~rlt~~g~sh~-~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~~----- 588 (867)
T KOG2281|consen 515 RKLVYFVGTKDTPLEHHLYVVSYENPGEIARLTEPGYSHS-CELDQQCDHFVSYYSSVGSPPCVSLYSLSWPEND----- 588 (867)
T ss_pred ceEEEEEccCCCCceeeEEEEEEecCCceeeccCCCcccc-hhhhhhhhhHhhhhhcCCCCceEEEEeccCCccC-----
Confidence 346777776554 4579999887 899999998765343 2355544557778899999999999998766522
Q ss_pred eccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cc
Q 005093 421 LNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SY 499 (715)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~ 499 (715)
++........-+++.......-.|- .-+.|....|..+.|.+|.|.++++.+++|+|++++|||...... .|
T Consensus 589 -----~l~~q~~~~~~l~~~~~~~Pdy~p~--eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsf 661 (867)
T KOG2281|consen 589 -----PLPKQVSFWAILVSGAPPPPDYVPP--EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSF 661 (867)
T ss_pred -----cccchhhHHHHHHhcCCCCCccCCh--hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccc
Confidence 1111111111222222222111111 113456678899999999999999999999999999999754221 22
Q ss_pred h----HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC-CCCCceEEEEEeChhHHHH
Q 005093 500 S----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLT 574 (715)
Q Consensus 500 ~----~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~d~~~i~l~G~S~GG~~a 574 (715)
. ..+..||.+||.|+.+|-||+...|..|...+..++|..+++|..+.+++|.++. .+|.+||+|-|+|+||+++
T Consensus 662 kgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLS 741 (867)
T KOG2281|consen 662 KGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLS 741 (867)
T ss_pred cceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHH
Confidence 2 2346789999999999999999999999999999999999999999999999985 7999999999999999999
Q ss_pred HHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC---CcE
Q 005093 575 THLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK---TPT 651 (715)
Q Consensus 575 ~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~---~P~ 651 (715)
+++++++|+.|+++|+.+|+.+|..+ .....++||+.|. .+...|.+-|...++.++. ..+
T Consensus 742 lm~L~~~P~IfrvAIAGapVT~W~~Y---------------DTgYTERYMg~P~-~nE~gY~agSV~~~VeklpdepnRL 805 (867)
T KOG2281|consen 742 LMGLAQYPNIFRVAIAGAPVTDWRLY---------------DTGYTERYMGYPD-NNEHGYGAGSVAGHVEKLPDEPNRL 805 (867)
T ss_pred HHHhhcCcceeeEEeccCcceeeeee---------------cccchhhhcCCCc-cchhcccchhHHHHHhhCCCCCceE
Confidence 99999999999999999999875422 2223456777664 3345566666666666664 459
Q ss_pred EEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 652 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 652 Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
|++||--|+.|.+.+...+..+|.++|++.++++||++.|+...++..+-.-.+++.|+++
T Consensus 806 lLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 806 LLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988887777789999875
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.97 E-value=2.4e-30 Score=250.08 Aligned_cols=206 Identities=34% Similarity=0.581 Sum_probs=173.7
Q ss_pred cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHH
Q 005093 498 SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHL 577 (715)
Q Consensus 498 ~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 577 (715)
.|....+.|+++||+|+.+||||++++|..+......+++..+++|+.++++++++++.+|++||+|+|+|+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 35677889999999999999999999999999988888998899999999999999999999999999999999999999
Q ss_pred HhhCCCceeEEEecCCcchhhhhccCCCCCCcee--eeccCCCCCCCCCCCCChhhHHHHHhcCchhhccC--CCCcEEE
Q 005093 578 IGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY--VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISK--VKTPTIF 653 (715)
Q Consensus 578 a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~--i~~P~Li 653 (715)
+.++|++|+++++.+|+.++.......+. +.. ...++ ......+.+...+|+..+.+ +++|+||
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~P~li 149 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYG----------DPWDNPEFYRELSPISPADNVQIKPPVLI 149 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHS----------STTTSHHHHHHHHHGGGGGGCGGGSEEEE
T ss_pred hcccceeeeeeeccceecchhcccccccc--cccccccccC----------ccchhhhhhhhhccccccccccCCCCEEE
Confidence 99999999999999999987655443322 100 00011 11235566777788888888 8899999
Q ss_pred EeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 654 LLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 654 i~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+||++|.+||+.++.+++++|+++|++++++++|+++|++..++...+..+++++||+++|+
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred EccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999998888888999999999999986
No 6
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.96 E-value=2.2e-25 Score=229.80 Aligned_cols=537 Identities=17% Similarity=0.150 Sum_probs=337.8
Q ss_pred eeCCCCceEEEEecCCCCCCeEEEE-e-cCCc-cEEEEecCccccc-cccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 49 VPSPSGSKLLVVRNPENESPIQFEL-W-SQSQ-LEKEFHVPQTVHG-SVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 49 ~~Spdg~~la~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
....+|.+-.|.+...+...-++.. . .++. .+.+++......+ .+| .+..++.|||++.+||+.+..
T Consensus 80 vp~~~~~~~Yy~r~~~g~~y~~~~R~~~~g~~~eevlLD~n~~A~g~~f~---~Lg~~~~s~D~~~la~s~D~~------ 150 (682)
T COG1770 80 VPYRKGPYEYYSRTEEGKEYPIYCRQPDEGGEGEEVLLDVNKEAEGHDFF---SLGAASISPDHNLLAYSVDVL------ 150 (682)
T ss_pred CccccCCeeEEEEecCCCcceeEEeccCCCCCceeEeecchhccCcccce---eeeeeeeCCCCceEEEEEecc------
Confidence 3456888888887665443344444 2 3444 3444443222111 111 235789999999999986543
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 204 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~ 204 (715)
|. .+..|.+.|+++|+..... - ......+.|.+|++. +.|
T Consensus 151 ----------------------------G~-----e~y~lr~kdL~tg~~~~d~--i-~~~~~~~~Wa~d~~~----lfY 190 (682)
T COG1770 151 ----------------------------GD-----EQYTLRFKDLATGEELPDE--I-TNTSGSFAWAADGKT----LFY 190 (682)
T ss_pred ----------------------------cc-----cEEEEEEEecccccccchh--h-cccccceEEecCCCe----EEE
Confidence 22 3477999999999865441 1 113557899999999 999
Q ss_pred EeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc--cccceeEcCCCCeEEEEecCC
Q 005093 205 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 205 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~~~~spdg~~l~~~~~~~ 282 (715)
+..... .++..||...+.. ...+-+.+.++.. ..-++.=|...++|+...+..
T Consensus 191 t~~d~~----------~rp~kv~~h~~gt---------------~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~ 245 (682)
T COG1770 191 TRLDEN----------HRPDKVWRHRLGT---------------PGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSH 245 (682)
T ss_pred EEEcCC----------CCcceEEEEecCC---------------CCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCC
Confidence 874332 2556788877621 0122222322211 112222244444554443221
Q ss_pred CCCCCCccccceeEeeecCCCCC--CCccccee----------e--eeeceecCCCC--------CccccccCCCC----
Q 005093 283 SVDSGAHSATDSLHRIDWPTNGN--FSSLEKIV----------D--VIPVVQCAEGD--------CFPGLYSSSIL---- 336 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~~--~~lt~~~~----------~--~~~~~~~~~~~--------~~~g~~~~~~~---- 336 (715)
..+++++++.+..+. +.+..... + .+.....+++. ..+..|...+.
T Consensus 246 --------~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~~d~f~i~sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~ 317 (682)
T COG1770 246 --------ITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHGGDRFYILSNADGKNFKLVRAPVSADKSNWRELIPHRED 317 (682)
T ss_pred --------cceeEEEEecCCCCCceEEEEEcCCCcEEeeeecCcEEEEEecCCCcceEEEEccCCCChhcCeeeeccCCC
Confidence 123444444433222 11111000 0 00000000000 00011111000
Q ss_pred --CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeE-EEe--ecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 337 --SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS-LLT--LDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 337 --~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~-~~s--~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
--.++--.+.|++....++..+++..+.++++...|......++.. ..+ .+...|.+.+++.++|.+++-+|+.+
T Consensus 318 ~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t 397 (682)
T COG1770 318 VRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMAT 397 (682)
T ss_pred ceeeeeeeeccEEEEEecccCCceEEEEecCCCceeeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeeccC
Confidence 0011112334556666678889999999888888887665533211 222 35678999999999999999999987
Q ss_pred cCCCcceeeeccCCCCCC-CchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCC
Q 005093 412 KANKGTWSWLNVSSPISR-CPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGG 490 (715)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg 490 (715)
++ ...+ . ..++.. +++ .+.....+. .+..+|..|...++.-++.+..++.|++|+.+|.
T Consensus 398 ~e-r~~L---k-qqeV~~g~dp--------~~Y~s~riw-------a~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGa 457 (682)
T COG1770 398 GE-RTLL---K-QQEVPGGFDP--------EDYVSRRIW-------ATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGA 457 (682)
T ss_pred Cc-EEEE---E-eccCCCCCCh--------hHeEEEEEE-------EEcCCCcEeeEEEEEecccCCCCCCcEEEEEecc
Confidence 75 1110 0 011112 332 122222222 1235777777778777766678899999999997
Q ss_pred CCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChh
Q 005093 491 PHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHG 570 (715)
Q Consensus 491 ~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~G 570 (715)
.+......|....--|..+||+......||.+.-|..|.+..........+.|++++.++|+++++.++++|+++|.|+|
T Consensus 458 YG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAG 537 (682)
T COG1770 458 YGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAG 537 (682)
T ss_pred ccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCch
Confidence 77766777776666788999999999999999999999887766666778999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC-C
Q 005093 571 GFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-T 649 (715)
Q Consensus 571 G~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~ 649 (715)
|+++..++.+.|++|+++|+..|++|.........++- .......+.+....+..+.+..+||+.++..-. +
T Consensus 538 GmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPL-------T~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP 610 (682)
T COG1770 538 GMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPL-------TVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYP 610 (682)
T ss_pred hHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCC-------CccchhhhCCcCCHHHHHHHhhcCchhccccCCCC
Confidence 99999999999999999999999999764443333221 111111122233456678888999999987744 6
Q ss_pred cEEEEeeCCCCcCCchHHHHHHHHHHHcCC---cEEEEEeCCCCccCC
Q 005093 650 PTIFLLGAQDLRVPVSNGLQYARALREKGV---ETKVIVFPNDVHGIE 694 (715)
Q Consensus 650 P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~~ 694 (715)
|+|++.|..|+.|...+..+...+|+..+. ++-+..--.+||+-.
T Consensus 611 ~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 611 AILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred ceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCC
Confidence 799999999999999999999999998754 455555457899754
No 7
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.96 E-value=1e-25 Score=228.95 Aligned_cols=345 Identities=17% Similarity=0.221 Sum_probs=263.7
Q ss_pred CCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCC
Q 005093 336 LSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKAN 414 (715)
Q Consensus 336 ~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~ 414 (715)
..+.+.+| .++....++...++...+...-+.+.+.... +.......+.++..+++...+...|+.+++.++.+.+
T Consensus 300 e~v~tt~~--~~va~~l~nv~~~l~v~~~~g~~~~~v~l~~~ga~~~~~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~e- 376 (648)
T COG1505 300 EQVVTTKD--KLVAGTLDNVSGRLEVYDLKGERIEEVELPPPGALGMGSADKDGDEVFLAFTSFTTPSTLYRLDLFGGE- 376 (648)
T ss_pred eeeEEEcC--eEEeeeehhccceEEEeccCceEeeecccCCccceeeccCCCCCcEEEEEeecccCCCceEEEecCCce-
Confidence 34556644 3666666555556666676553444443322 2222223344678899999999999999999987664
Q ss_pred CcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC
Q 005093 415 KGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV 494 (715)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~ 494 (715)
... +-++..++ ...++++.+. ...+.||+.|+.++.. ++.+.. +.|++|+-+||....
T Consensus 377 Le~-----ik~~p~~F--------Da~~~~veQ~-------~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vs 434 (648)
T COG1505 377 LEV-----IREQPVQF--------DADNYEVEQF-------FATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNIS 434 (648)
T ss_pred ehh-----hhhccCCc--------CccCceEEEE-------EEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccc
Confidence 111 10011111 1223333332 4466789999999998 776555 899999999998888
Q ss_pred CCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHH
Q 005093 495 SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLT 574 (715)
Q Consensus 495 ~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a 574 (715)
..+.|......+.++|.+.++.+.||.++||..|+++..+...+..++|+.++++.|+++++..+++++|.|.|-||.++
T Consensus 435 ltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLv 514 (648)
T COG1505 435 LTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLV 514 (648)
T ss_pred cCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEE
Confidence 88888888888899999999999999999999999988877777789999999999999999999999999999999999
Q ss_pred HHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCC--CCcEE
Q 005093 575 THLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTI 652 (715)
Q Consensus 575 ~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~L 652 (715)
..++.+.|++|.|+|+..|+.||..+........| +..|+ .....++...+.++||++++..- -+|+|
T Consensus 515 g~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW--~~EYG--------~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~L 584 (648)
T COG1505 515 GAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSW--IAEYG--------NPDDPEDRAFLLAYSPYHNLKPGQKYPPTL 584 (648)
T ss_pred EeeeccChhhhCceeeccchhhhhhhcccccchhh--HhhcC--------CCCCHHHHHHHHhcCchhcCCccccCCCeE
Confidence 99999999999999999999998876544333222 33444 34556788899999999998763 37899
Q ss_pred EEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch-HHHHHHHHHHHHHhcC
Q 005093 653 FLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD-FESFLNIGLWFKKYCK 715 (715)
Q Consensus 653 ii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~-~~~~~~i~~wl~~~l~ 715 (715)
|..+.+|.+|.+.+++.|+.+|++.+.++-+.+-.++||+-..+... .+....+..||.+.|+
T Consensus 585 ITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 585 ITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred EEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999888888899987655444 3455678889988874
No 8
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.96 E-value=3.5e-27 Score=249.63 Aligned_cols=267 Identities=17% Similarity=0.202 Sum_probs=200.7
Q ss_pred CccccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCce--EEEEecCCCCCCeEEEEe-cCC
Q 005093 1 MFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSK--LLVVRNPENESPIQFELW-SQS 77 (715)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~--la~~~~~~~~~~~~~~~~-~~~ 77 (715)
+|++++.+.+++++.+.||++|.++. ++.+||... +....|+|||||++ ++|++.++ +..++|.++ .+|
T Consensus 150 ayv~~~~~~~~~~~~~~l~~~d~dG~--~~~~lt~~~-----~~~~sP~wSPDG~~~~~~y~S~~~-g~~~I~~~~l~~g 221 (428)
T PRK01029 150 IFSLSTTNSDTELKQGELWSVDYDGQ--NLRPLTQEH-----SLSITPTWMHIGSGFPYLYVSYKL-GVPKIFLGSLENP 221 (428)
T ss_pred EEEEeeCCcccccccceEEEEcCCCC--CceEcccCC-----CCcccceEccCCCceEEEEEEccC-CCceEEEEECCCC
Confidence 47888888888888999999776554 567777755 55789999999988 55687766 778999999 788
Q ss_pred ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccC
Q 005093 78 QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYA 157 (715)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 157 (715)
+.++++..+... ..++|||||++|+|.++.. |
T Consensus 222 ~~~~lt~~~g~~----------~~p~wSPDG~~Laf~s~~~----------------------------------g---- 253 (428)
T PRK01029 222 AGKKILALQGNQ----------LMPTFSPRKKLLAFISDRY----------------------------------G---- 253 (428)
T ss_pred CceEeecCCCCc----------cceEECCCCCEEEEEECCC----------------------------------C----
Confidence 888888765554 5799999999999987532 1
Q ss_pred CccCceEEE--EEccC---CceEeecCCCCC-CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 158 GKRQPSLFV--ININS---GEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 158 ~~~~~~l~~--~~~~~---g~~~~l~~~~~~-~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
...+|+ +++++ ++.+++ +... .....++|||||+. |+|.+...+ ..+||.+++
T Consensus 254 ---~~di~~~~~~~~~g~~g~~~~l--t~~~~~~~~~p~wSPDG~~----Laf~s~~~g------------~~~ly~~~~ 312 (428)
T PRK01029 254 ---NPDLFIQSFSLETGAIGKPRRL--LNEAFGTQGNPSFSPDGTR----LVFVSNKDG------------RPRIYIMQI 312 (428)
T ss_pred ---CcceeEEEeecccCCCCcceEe--ecCCCCCcCCeEECCCCCE----EEEEECCCC------------CceEEEEEC
Confidence 134555 45554 566777 3332 23457899999999 999874322 247999986
Q ss_pred ccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccc
Q 005093 232 SLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 311 (715)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~ 311 (715)
+. .++..++++........|.|||||++|+|.+... +..+|+++|+.+++.+.++..
T Consensus 313 ~~---------------~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~--------g~~~I~v~dl~~g~~~~Lt~~ 369 (428)
T PRK01029 313 DP---------------EGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK--------GVRQICVYDLATGRDYQLTTS 369 (428)
T ss_pred cc---------------cccceEEeccCCCCccceeECCCCCEEEEEEcCC--------CCcEEEEEECCCCCeEEccCC
Confidence 20 2355777887766778899999999999998763 245799999999887766643
Q ss_pred eeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeec
Q 005093 312 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 387 (715)
Q Consensus 312 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~ 387 (715)
.. ....+.|+|||+.|+|++...+...||.+|+++++.++++...+....+.|++-
T Consensus 370 ~~--------------------~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~ 425 (428)
T PRK01029 370 PE--------------------NKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAF 425 (428)
T ss_pred CC--------------------CccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCC
Confidence 10 234578999999999988877788999999999999999876654455666653
No 9
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.94 E-value=1.7e-25 Score=237.97 Aligned_cols=252 Identities=16% Similarity=0.196 Sum_probs=190.7
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (715)
+++.+.||++|.++. +..++|..+ ..+..|+|||||++|||++..+ +..+++.++ .+|+.+.++......
T Consensus 175 ~~~~~~l~~~d~dg~--~~~~lt~~~-----~~~~~p~wSPDG~~la~~s~~~-g~~~i~i~dl~~G~~~~l~~~~~~~- 245 (429)
T PRK03629 175 GQFPYELRVSDYDGY--NQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASFPRHN- 245 (429)
T ss_pred CCcceeEEEEcCCCC--CCEEeecCC-----CceeeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCCeEEccCCCCCc-
Confidence 467889999877655 446676655 5678999999999999997654 567888877 677777776554433
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
..+.|||||++|+|..... +..+||++|++
T Consensus 246 ---------~~~~~SPDG~~La~~~~~~-----------------------------------------g~~~I~~~d~~ 275 (429)
T PRK03629 246 ---------GAPAFSPDGSKLAFALSKT-----------------------------------------GSLNLYVMDLA 275 (429)
T ss_pred ---------CCeEECCCCCEEEEEEcCC-----------------------------------------CCcEEEEEECC
Confidence 5799999999999975432 22579999999
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
+++.+++ +........+.|||||+. |+|++... ...+||.+|+ .+
T Consensus 276 tg~~~~l--t~~~~~~~~~~wSPDG~~----I~f~s~~~------------g~~~Iy~~d~-----------------~~ 320 (429)
T PRK03629 276 SGQIRQV--TDGRSNNTEPTWFPDSQN----LAYTSDQA------------GRPQVYKVNI-----------------NG 320 (429)
T ss_pred CCCEEEc--cCCCCCcCceEECCCCCE----EEEEeCCC------------CCceEEEEEC-----------------CC
Confidence 9999999 454445678999999999 99988432 2248999997 77
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccc
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 330 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~ 330 (715)
+..++++........+.|||||++|+|.+... ...+|+++|+.++..+.|+...
T Consensus 321 g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~--------g~~~I~~~dl~~g~~~~Lt~~~------------------ 374 (429)
T PRK03629 321 GAPQRITWEGSQNQDADVSSDGKFMVMVSSNG--------GQQHIAKQDLATGGVQVLTDTF------------------ 374 (429)
T ss_pred CCeEEeecCCCCccCEEECCCCCEEEEEEccC--------CCceEEEEECCCCCeEEeCCCC------------------
Confidence 78888877655667899999999999998764 2357999999887766665321
Q ss_pred ccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEee
Q 005093 331 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 386 (715)
Q Consensus 331 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~ 386 (715)
....+.|+|||+.|++.+.+++...|+.++++++..+++....+....+.|+|
T Consensus 375 ---~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 375 ---LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred ---CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcCCcccCC
Confidence 12356799999999999988777889999997777777765444333344543
No 10
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2e-23 Score=213.28 Aligned_cols=302 Identities=20% Similarity=0.228 Sum_probs=224.4
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEE
Q 005093 387 DGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFE 466 (715)
Q Consensus 387 ~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 466 (715)
+...+.|..+++.+|+.||.+|+..+. ...-.+.+++..+..+ ....+....+ ...+.||..|.
T Consensus 392 ~~~~~~f~~sS~l~P~~iy~yDl~~~~-~e~~vf~e~~~~lpg~--------~~s~y~~~r~-------~~~SkDGt~VP 455 (712)
T KOG2237|consen 392 KSSTIRFQFSSFLTPGSIYDYDLANGK-PEPSVFREITVVLPGF--------DASDYVVERI-------EVSSKDGTKVP 455 (712)
T ss_pred CCceEEEEEeccCCCCeEEEeeccCCC-CCCcceeeeccccCcc--------cccceEEEEE-------EEecCCCCccc
Confidence 456888999999999999999998764 1111122232212111 1122233333 44666888888
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHH
Q 005093 467 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 546 (715)
Q Consensus 467 ~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~ 546 (715)
..++.-+..+..++.|++|+.||+........|......|..+|++.+..|.||.|++|..|++..........++|+++
T Consensus 456 M~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia 535 (712)
T KOG2237|consen 456 MFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIA 535 (712)
T ss_pred eEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHH
Confidence 88888766667789999999999887776677776555566799999999999999999999988777777778999999
Q ss_pred HHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCC
Q 005093 547 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTES 626 (715)
Q Consensus 547 ~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (715)
++++|++++++.++++++.|.|.||.++..++.++|++|.|+|+..|+.|+......+..+.|.. .++. .
T Consensus 536 ~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~s--d~ee--------~ 605 (712)
T KOG2237|consen 536 CAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTS--DYEE--------W 605 (712)
T ss_pred HHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchh--hhcc--------c
Confidence 99999999999999999999999999999999999999999999999999887765555554421 1111 1
Q ss_pred CChhhHHHHHhcCchhhccCCC-----CcEEEEeeCCCCcCCchHHHHHHHHHHHc-------CCcEEEEEeCCCCccCC
Q 005093 627 PSVEDLTRFHSKSPISHISKVK-----TPTIFLLGAQDLRVPVSNGLQYARALREK-------GVETKVIVFPNDVHGIE 694 (715)
Q Consensus 627 ~~~~~~~~~~~~sp~~~~~~i~-----~P~Lii~G~~D~~v~~~~~~~~~~~l~~~-------g~~~~~~~~~~~~H~~~ 694 (715)
...++.+.+..++|+..+++++ +-+|+..+.+|.+|++.++..+..+|+.+ ..++-+.+..++||+.-
T Consensus 606 g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~ 685 (712)
T KOG2237|consen 606 GNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAE 685 (712)
T ss_pred CChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccC
Confidence 1234555566666666555543 45899999999999999999999998865 24577889999999765
Q ss_pred CCC-chHHHHHHHHHHHHHhc
Q 005093 695 RPQ-SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 695 ~~~-~~~~~~~~i~~wl~~~l 714 (715)
.+. ...+......+|+.+.+
T Consensus 686 ~~~~k~~~E~a~~yaFl~K~~ 706 (712)
T KOG2237|consen 686 KPRFKQIEEAAFRYAFLAKML 706 (712)
T ss_pred CchHHHHHHHHHHHHHHHHHh
Confidence 432 22333445667776543
No 11
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.93 E-value=3.3e-24 Score=229.81 Aligned_cols=250 Identities=13% Similarity=0.115 Sum_probs=187.3
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (715)
++...||++|.++ .++++||... ..+..|+|||||++|||++..+ +..++|.++ .+|+.++++......
T Consensus 179 ~~~~~l~~~d~dg--~~~~~lt~~~-----~~v~~p~wSpDG~~lay~s~~~-g~~~i~~~dl~~g~~~~l~~~~g~~-- 248 (435)
T PRK05137 179 KRIKRLAIMDQDG--ANVRYLTDGS-----SLVLTPRFSPNRQEITYMSYAN-GRPRVYLLDLETGQRELVGNFPGMT-- 248 (435)
T ss_pred CcceEEEEECCCC--CCcEEEecCC-----CCeEeeEECCCCCEEEEEEecC-CCCEEEEEECCCCcEEEeecCCCcc--
Confidence 3477999977744 4557777655 5689999999999999998765 567888887 677777776544333
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
..++|||||++|+|..... +..+||++|+++
T Consensus 249 --------~~~~~SPDG~~la~~~~~~-----------------------------------------g~~~Iy~~d~~~ 279 (435)
T PRK05137 249 --------FAPRFSPDGRKVVMSLSQG-----------------------------------------GNTDIYTMDLRS 279 (435)
T ss_pred --------cCcEECCCCCEEEEEEecC-----------------------------------------CCceEEEEECCC
Confidence 6899999999999975432 237899999999
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
++.+++ +........+.|||||+. |+|.+...+ ..+||++|+ .++
T Consensus 280 ~~~~~L--t~~~~~~~~~~~spDG~~----i~f~s~~~g------------~~~Iy~~d~-----------------~g~ 324 (435)
T PRK05137 280 GTTTRL--TDSPAIDTSPSYSPDGSQ----IVFESDRSG------------SPQLYVMNA-----------------DGS 324 (435)
T ss_pred CceEEc--cCCCCccCceeEcCCCCE----EEEEECCCC------------CCeEEEEEC-----------------CCC
Confidence 999999 444444567899999999 999874322 248999997 788
Q ss_pred CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 252 PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 252 ~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
..++++...+....|.|||||++|+|.+... +..+|+++++.++..+.++.+.
T Consensus 325 ~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~--------~~~~i~~~d~~~~~~~~lt~~~------------------- 377 (435)
T PRK05137 325 NPRRISFGGGRYSTPVWSPRGDLIAFTKQGG--------GQFSIGVMKPDGSGERILTSGF------------------- 377 (435)
T ss_pred CeEEeecCCCcccCeEECCCCCEEEEEEcCC--------CceEEEEEECCCCceEeccCCC-------------------
Confidence 8889987666677899999999999998653 2357999998776655444221
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCe---eEEEEEECCCCcEEEecCCCCCceeEEEee
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSS---QVIISVNVSSGELLRITPAESNFSWSLLTL 386 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~---~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~ 386 (715)
....+.|+|||+.|+|.+...+. ..||.+|++++..+++.. .+....+.|++
T Consensus 378 --~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~~l~~-~~~~~~p~Wsp 432 (435)
T PRK05137 378 --LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNEREVPT-PGDASDPAWSP 432 (435)
T ss_pred --CCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceEEccC-CCCccCcccCC
Confidence 23467899999999998876554 589999998888877764 33333444443
No 12
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.93 E-value=5.2e-24 Score=227.48 Aligned_cols=251 Identities=17% Similarity=0.178 Sum_probs=187.0
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (715)
++...||+.|.++. +..+||..+ ..+..|+|||||++|+|++..+ +..++|.++ .+|+.++++......
T Consensus 195 ~~~~~l~i~d~dG~--~~~~l~~~~-----~~~~~p~wSPDG~~La~~s~~~-g~~~L~~~dl~tg~~~~lt~~~g~~-- 264 (448)
T PRK04792 195 KYPYQLMIADYDGY--NEQMLLRSP-----EPLMSPAWSPDGRKLAYVSFEN-RKAEIFVQDIYTQVREKVTSFPGIN-- 264 (448)
T ss_pred CCceEEEEEeCCCC--CceEeecCC-----CcccCceECCCCCEEEEEEecC-CCcEEEEEECCCCCeEEecCCCCCc--
Confidence 45678998766554 446676665 5678999999999999998765 667899988 677776666544332
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
..++|||||++|+|..... +..+||++|+++
T Consensus 265 --------~~~~wSPDG~~La~~~~~~-----------------------------------------g~~~Iy~~dl~t 295 (448)
T PRK04792 265 --------GAPRFSPDGKKLALVLSKD-----------------------------------------GQPEIYVVDIAT 295 (448)
T ss_pred --------CCeeECCCCCEEEEEEeCC-----------------------------------------CCeEEEEEECCC
Confidence 5789999999999975432 236899999999
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
++.+++ +........+.|||||+. |+|++... ...+||.+|+ .++
T Consensus 296 g~~~~l--t~~~~~~~~p~wSpDG~~----I~f~s~~~------------g~~~Iy~~dl-----------------~~g 340 (448)
T PRK04792 296 KALTRI--TRHRAIDTEPSWHPDGKS----LIFTSERG------------GKPQIYRVNL-----------------ASG 340 (448)
T ss_pred CCeEEC--ccCCCCccceEECCCCCE----EEEEECCC------------CCceEEEEEC-----------------CCC
Confidence 999998 444445567899999999 99987432 2248999997 778
Q ss_pred CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 252 PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 252 ~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
+.++++........|.|||||++|+|.+... ...+||++|+.+++.+.++...
T Consensus 341 ~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~--------g~~~I~~~dl~~g~~~~lt~~~------------------- 393 (448)
T PRK04792 341 KVSRLTFEGEQNLGGSITPDGRSMIMVNRTN--------GKFNIARQDLETGAMQVLTSTR------------------- 393 (448)
T ss_pred CEEEEecCCCCCcCeeECCCCCEEEEEEecC--------CceEEEEEECCCCCeEEccCCC-------------------
Confidence 8888875444456799999999999987653 2457999999887765555321
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEee
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 386 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~ 386 (715)
....+.|+|||+.|++++..++...||.++.+++..++++...+....+.|+|
T Consensus 394 --~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 394 --LDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred --CCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCCccCC
Confidence 01245799999999999988888889999997666777765544344445543
No 13
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.93 E-value=6.5e-24 Score=222.90 Aligned_cols=244 Identities=9% Similarity=0.008 Sum_probs=181.8
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCce-EEEEecCCCCCCeEEEEe-cCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSK-LLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~-la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (715)
+...||+.|.++.+ +.+++.. +....|+|||||++ ++|++..+ +..++|.++ .+|+.++++......
T Consensus 167 ~~~~l~~~d~dg~~--~~~~~~~------~~~~~p~wSpDG~~~i~y~s~~~-~~~~Iyv~dl~tg~~~~lt~~~g~~-- 235 (419)
T PRK04043 167 KKSNIVLADYTLTY--QKVIVKG------GLNIFPKWANKEQTAFYYTSYGE-RKPTLYKYNLYTGKKEKIASSQGML-- 235 (419)
T ss_pred CcceEEEECCCCCc--eeEEccC------CCeEeEEECCCCCcEEEEEEccC-CCCEEEEEECCCCcEEEEecCCCcE--
Confidence 46899997776654 4555543 23578999999997 66666553 567999999 788888887643333
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
..+.|||||++|+|..... +..+||++|+++
T Consensus 236 --------~~~~~SPDG~~la~~~~~~-----------------------------------------g~~~Iy~~dl~~ 266 (419)
T PRK04043 236 --------VVSDVSKDGSKLLLTMAPK-----------------------------------------GQPDIYLYDTNT 266 (419)
T ss_pred --------EeeEECCCCCEEEEEEccC-----------------------------------------CCcEEEEEECCC
Confidence 5688999999999986532 237899999999
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
++.++++ ........+.|||||++ |+|+++.. ...+||++|+ +++
T Consensus 267 g~~~~LT--~~~~~d~~p~~SPDG~~----I~F~Sdr~------------g~~~Iy~~dl-----------------~~g 311 (419)
T PRK04043 267 KTLTQIT--NYPGIDVNGNFVEDDKR----IVFVSDRL------------GYPNIFMKKL-----------------NSG 311 (419)
T ss_pred CcEEEcc--cCCCccCccEECCCCCE----EEEEECCC------------CCceEEEEEC-----------------CCC
Confidence 9999994 44333456789999999 99998542 2248999998 788
Q ss_pred CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 252 PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 252 ~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
+.++++.... ..+.|||||++|+|++...... ......+||++|++++..++||...
T Consensus 312 ~~~rlt~~g~--~~~~~SPDG~~Ia~~~~~~~~~--~~~~~~~I~v~d~~~g~~~~LT~~~------------------- 368 (419)
T PRK04043 312 SVEQVVFHGK--NNSSVSTYKNYIVYSSRETNNE--FGKNTFNLYLISTNSDYIRRLTANG------------------- 368 (419)
T ss_pred CeEeCccCCC--cCceECCCCCEEEEEEcCCCcc--cCCCCcEEEEEECCCCCeEECCCCC-------------------
Confidence 8888886433 2469999999999999764211 0012368999999998887777532
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES 377 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~ 377 (715)
....+.|+|||+.|+|.+..++...|+.+++++....++....+
T Consensus 369 --~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l~~~~g 412 (419)
T PRK04043 369 --VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLFPLKVG 412 (419)
T ss_pred --CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEeecCCC
Confidence 11246799999999999888888889999997777777765444
No 14
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.93 E-value=1.1e-23 Score=224.67 Aligned_cols=250 Identities=15% Similarity=0.164 Sum_probs=184.3
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 92 (715)
....||.+|.++ .++.+++... ..+..|+|||||++|||++..+ +..++|..+ .+|+..+++......
T Consensus 174 ~~~~L~~~D~dG--~~~~~l~~~~-----~~v~~p~wSPDG~~la~~s~~~-~~~~I~~~dl~~g~~~~l~~~~g~~--- 242 (427)
T PRK02889 174 NRYQLQISDADG--QNAQSALSSP-----EPIISPAWSPDGTKLAYVSFES-KKPVVYVHDLATGRRRVVANFKGSN--- 242 (427)
T ss_pred CccEEEEECCCC--CCceEeccCC-----CCcccceEcCCCCEEEEEEccC-CCcEEEEEECCCCCEEEeecCCCCc---
Confidence 356899976643 4456666544 5678999999999999998764 567888877 677777766544333
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
..++|||||++|+|..... +..+||++|++++
T Consensus 243 -------~~~~~SPDG~~la~~~~~~-----------------------------------------g~~~Iy~~d~~~~ 274 (427)
T PRK02889 243 -------SAPAWSPDGRTLAVALSRD-----------------------------------------GNSQIYTVNADGS 274 (427)
T ss_pred -------cceEECCCCCEEEEEEccC-----------------------------------------CCceEEEEECCCC
Confidence 5899999999999975432 2378999999999
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
+.+++ +........+.|||||+. |+|+++..+ ..+||.+++ .++.
T Consensus 275 ~~~~l--t~~~~~~~~~~wSpDG~~----l~f~s~~~g------------~~~Iy~~~~-----------------~~g~ 319 (427)
T PRK02889 275 GLRRL--TQSSGIDTEPFFSPDGRS----IYFTSDRGG------------APQIYRMPA-----------------SGGA 319 (427)
T ss_pred CcEEC--CCCCCCCcCeEEcCCCCE----EEEEecCCC------------CcEEEEEEC-----------------CCCc
Confidence 98888 444334567899999999 999874322 247999997 6777
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
.++++........|.|||||++|+|.+... ...+|+++|+.+++.+.++...
T Consensus 320 ~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~--------g~~~I~v~d~~~g~~~~lt~~~-------------------- 371 (427)
T PRK02889 320 AQRVTFTGSYNTSPRISPDGKLLAYISRVG--------GAFKLYVQDLATGQVTALTDTT-------------------- 371 (427)
T ss_pred eEEEecCCCCcCceEECCCCCEEEEEEccC--------CcEEEEEEECCCCCeEEccCCC--------------------
Confidence 777775555566799999999999998763 2357999999887766665321
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEee
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 386 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~ 386 (715)
....+.|+|||+.|++.+..++...|+.++++++..+++....+....+.|+|
T Consensus 372 -~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 372 -RDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred -CccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEEeecCCCCCCCCccCC
Confidence 12356899999999999998888889999996555666654444444445544
No 15
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.93 E-value=9.9e-24 Score=225.80 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=187.4
Q ss_pred cccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccc
Q 005093 11 ANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTV 89 (715)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 89 (715)
.++....||++|.++ .++.+||... ..+..|+|||||++|||++..+ +..++|.++ .+|+.++++......
T Consensus 179 ~~~~~~~l~i~D~~g--~~~~~lt~~~-----~~v~~p~wSpDg~~la~~s~~~-~~~~l~~~dl~~g~~~~l~~~~g~~ 250 (433)
T PRK04922 179 GGAMRYALQVADSDG--YNPQTILRSA-----EPILSPAWSPDGKKLAYVSFER-GRSAIYVQDLATGQRELVASFRGIN 250 (433)
T ss_pred CCCceEEEEEECCCC--CCceEeecCC-----CccccccCCCCCCEEEEEecCC-CCcEEEEEECCCCCEEEeccCCCCc
Confidence 344677899977754 4556776654 5678999999999999998664 567888888 677776666543322
Q ss_pred cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 90 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
..++|||||++|+|..... +..+||++|+
T Consensus 251 ----------~~~~~SpDG~~l~~~~s~~-----------------------------------------g~~~Iy~~d~ 279 (433)
T PRK04922 251 ----------GAPSFSPDGRRLALTLSRD-----------------------------------------GNPEIYVMDL 279 (433)
T ss_pred ----------cCceECCCCCEEEEEEeCC-----------------------------------------CCceEEEEEC
Confidence 5789999999999976432 2368999999
Q ss_pred cCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 170 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 170 ~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
++++.+++ +........+.|||||+. |+|.++..+ ..+||.+++ .
T Consensus 280 ~~g~~~~l--t~~~~~~~~~~~spDG~~----l~f~sd~~g------------~~~iy~~dl-----------------~ 324 (433)
T PRK04922 280 GSRQLTRL--TNHFGIDTEPTWAPDGKS----IYFTSDRGG------------RPQIYRVAA-----------------S 324 (433)
T ss_pred CCCCeEEC--ccCCCCccceEECCCCCE----EEEEECCCC------------CceEEEEEC-----------------C
Confidence 99999988 343334457899999999 999874322 237999997 7
Q ss_pred CCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 250 DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 250 ~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
+++.++++........|+|||||++|+|.+... ...+|+++|+.+++.+.++.+.
T Consensus 325 ~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~--------~~~~I~v~d~~~g~~~~Lt~~~----------------- 379 (433)
T PRK04922 325 GGSAERLTFQGNYNARASVSPDGKKIAMVHGSG--------GQYRIAVMDLSTGSVRTLTPGS----------------- 379 (433)
T ss_pred CCCeEEeecCCCCccCEEECCCCCEEEEEECCC--------CceeEEEEECCCCCeEECCCCC-----------------
Confidence 778888876555566799999999999987642 2357999999887776665332
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEe
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLT 385 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s 385 (715)
....+.|+|||+.|+|.+...+...||.++++++..++++...+....+.|+
T Consensus 380 ----~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~~~~g~~~~p~ws 431 (433)
T PRK04922 380 ----LDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRLVSADGEVREPAWS 431 (433)
T ss_pred ----CCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEcccCCCCCCCCccC
Confidence 1234679999999999998888889999999877777776544433334444
No 16
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.92 E-value=2.4e-23 Score=223.83 Aligned_cols=248 Identities=16% Similarity=0.169 Sum_probs=183.5
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
...||++|.++. +..+++... ..+..|+|||||++|||++..+ +..++|.++ .+|+.++++......
T Consensus 178 ~~~l~~~d~~g~--~~~~l~~~~-----~~~~~p~wSpDG~~la~~s~~~-~~~~l~~~~l~~g~~~~l~~~~g~~---- 245 (430)
T PRK00178 178 RYTLQRSDYDGA--RAVTLLQSR-----EPILSPRWSPDGKRIAYVSFEQ-KRPRIFVQNLDTGRREQITNFEGLN---- 245 (430)
T ss_pred ceEEEEECCCCC--CceEEecCC-----CceeeeeECCCCCEEEEEEcCC-CCCEEEEEECCCCCEEEccCCCCCc----
Confidence 336888766544 446665544 4578999999999999998765 567899888 677777766543322
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
..++|||||++|+|..... +..+||++|+++++
T Consensus 246 ------~~~~~SpDG~~la~~~~~~-----------------------------------------g~~~Iy~~d~~~~~ 278 (430)
T PRK00178 246 ------GAPAWSPDGSKLAFVLSKD-----------------------------------------GNPEIYVMDLASRQ 278 (430)
T ss_pred ------CCeEECCCCCEEEEEEccC-----------------------------------------CCceEEEEECCCCC
Confidence 5799999999999976432 22689999999999
Q ss_pred eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc
Q 005093 174 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 253 (715)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (715)
.+++ +........+.|||||+. |+|.+... ...+||.+++ .+++.
T Consensus 279 ~~~l--t~~~~~~~~~~~spDg~~----i~f~s~~~------------g~~~iy~~d~-----------------~~g~~ 323 (430)
T PRK00178 279 LSRV--TNHPAIDTEPFWGKDGRT----LYFTSDRG------------GKPQIYKVNV-----------------NGGRA 323 (430)
T ss_pred eEEc--ccCCCCcCCeEECCCCCE----EEEEECCC------------CCceEEEEEC-----------------CCCCE
Confidence 9988 444444567899999999 99987432 2247999997 77888
Q ss_pred eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccC
Q 005093 254 VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 333 (715)
Q Consensus 254 ~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~ 333 (715)
++++........|.|||||++|+|.+... ...+|+++|+.+++.+.++...
T Consensus 324 ~~lt~~~~~~~~~~~Spdg~~i~~~~~~~--------~~~~l~~~dl~tg~~~~lt~~~--------------------- 374 (430)
T PRK00178 324 ERVTFVGNYNARPRLSADGKTLVMVHRQD--------GNFHVAAQDLQRGSVRILTDTS--------------------- 374 (430)
T ss_pred EEeecCCCCccceEECCCCCEEEEEEccC--------CceEEEEEECCCCCEEEccCCC---------------------
Confidence 88876555566799999999999998653 2457999999988776665321
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEe
Q 005093 334 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLT 385 (715)
Q Consensus 334 ~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s 385 (715)
....+.|+|||+.++|++...+...||.+++.++..+++....+....+.|+
T Consensus 375 ~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p~ws 426 (430)
T PRK00178 375 LDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWS 426 (430)
T ss_pred CCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCCccC
Confidence 1124579999999999998888889999999766666776544433334444
No 17
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.91 E-value=1.7e-22 Score=216.60 Aligned_cols=245 Identities=13% Similarity=0.113 Sum_probs=186.9
Q ss_pred CCceEEEEecCCCC---CCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 005093 53 SGSKLLVVRNPENE---SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 128 (715)
Q Consensus 53 dg~~la~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 128 (715)
-+.+|||+++..+. ..++|.++ +++..++++...... ..++|||||++|+|++...
T Consensus 164 f~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v----------~~p~wSpDG~~lay~s~~~---------- 223 (435)
T PRK05137 164 FDTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLV----------LTPRFSPNRQEITYMSYAN---------- 223 (435)
T ss_pred CCCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCe----------EeeEECCCCCEEEEEEecC----------
Confidence 45689999876532 45788777 566677777544333 7899999999999986532
Q ss_pred CCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeec
Q 005093 129 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 208 (715)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~ 208 (715)
+..+||++|+++|+.+++ +........++|||||++ |+|+...
T Consensus 224 -------------------------------g~~~i~~~dl~~g~~~~l--~~~~g~~~~~~~SPDG~~----la~~~~~ 266 (435)
T PRK05137 224 -------------------------------GRPRVYLLDLETGQRELV--GNFPGMTFAPRFSPDGRK----VVMSLSQ 266 (435)
T ss_pred -------------------------------CCCEEEEEECCCCcEEEe--ecCCCcccCcEECCCCCE----EEEEEec
Confidence 237899999999999888 333335568899999999 9998642
Q ss_pred CccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCC
Q 005093 209 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 288 (715)
Q Consensus 209 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~ 288 (715)
+ .+.+||++|+ +++..++|+........|.|||||++|+|.+.+.
T Consensus 267 ~------------g~~~Iy~~d~-----------------~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~------ 311 (435)
T PRK05137 267 G------------GNTDIYTMDL-----------------RSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRS------ 311 (435)
T ss_pred C------------CCceEEEEEC-----------------CCCceEEccCCCCccCceeEcCCCCEEEEEECCC------
Confidence 2 3358999997 7888899998777778899999999999998764
Q ss_pred ccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 289 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
+..+||++|+.+++.++++... .....+.|+|||+.|++.....+..+|+.+|++++.
T Consensus 312 --g~~~Iy~~d~~g~~~~~lt~~~--------------------~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~ 369 (435)
T PRK05137 312 --GSPQLYVMNADGSNPRRISFGG--------------------GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG 369 (435)
T ss_pred --CCCeEEEEECCCCCeEEeecCC--------------------CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence 2357999999887766665321 023456799999999998876677899999998888
Q ss_pred EEEecCCCCCceeEEEeecCCEEEEEEeCCCCC--CeEEEEeeccc
Q 005093 369 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDV--PQVKYGYFVDK 412 (715)
Q Consensus 369 ~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p--~~l~~~~~~~~ 412 (715)
.+.++... ......|++||+.|+++....... ..|++++++++
T Consensus 370 ~~~lt~~~-~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~ 414 (435)
T PRK05137 370 ERILTSGF-LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR 414 (435)
T ss_pred eEeccCCC-CCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC
Confidence 77776543 344578999999999988766553 57999987654
No 18
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.90 E-value=4.2e-22 Score=210.95 Aligned_cols=252 Identities=14% Similarity=0.143 Sum_probs=180.7
Q ss_pred EeeCCCCceEEEEecCCC-----CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeE--EEEeecCC
Q 005093 48 VVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLI--AYVAEEPS 119 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~l--a~~~~~~~ 119 (715)
+.++ +++|||+....+ ....+|.++ +++..+++|...... ..++|||||+++ +|++...
T Consensus 142 ~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~----------~sP~wSPDG~~~~~~y~S~~~- 208 (428)
T PRK01029 142 PGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLS----------ITPTWMHIGSGFPYLYVSYKL- 208 (428)
T ss_pred Cccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCc----------ccceEccCCCceEEEEEEccC-
Confidence 4444 899999986532 145788888 777888887643333 689999999984 4565432
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
+..+||++++++|+.++++ ........++|||||++
T Consensus 209 ----------------------------------------g~~~I~~~~l~~g~~~~lt--~~~g~~~~p~wSPDG~~-- 244 (428)
T PRK01029 209 ----------------------------------------GVPKIFLGSLENPAGKKIL--ALQGNQLMPTFSPRKKL-- 244 (428)
T ss_pred ----------------------------------------CCceEEEEECCCCCceEee--cCCCCccceEECCCCCE--
Confidence 2378999999999999994 44444557899999999
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEE--ecccccchhhhhhhhccCCCCCCceecCCCC-ccccceeEcCCCCeEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAV--RVSLYKSEASELELKESSSEDLPVVNLTESI-SSAFFPRFSPDGKFLV 276 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-~~~~~~~~spdg~~l~ 276 (715)
|+|+....+ ..+||+. +++. ..++..++++... .....|+|||||++|+
T Consensus 245 --Laf~s~~~g------------~~di~~~~~~~~~--------------g~~g~~~~lt~~~~~~~~~p~wSPDG~~La 296 (428)
T PRK01029 245 --LAFISDRYG------------NPDLFIQSFSLET--------------GAIGKPRRLLNEAFGTQGNPSFSPDGTRLV 296 (428)
T ss_pred --EEEEECCCC------------CcceeEEEeeccc--------------CCCCcceEeecCCCCCcCCeEECCCCCEEE
Confidence 999874322 2356664 4310 0135667788654 3457899999999999
Q ss_pred EEecCCCCCCCCccccceeEeeecCCC--CCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTN--GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~--~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
|.+.+. +..+||++++... ..++++... .....+.|+|||+.|+|.....
T Consensus 297 f~s~~~--------g~~~ly~~~~~~~g~~~~~lt~~~--------------------~~~~~p~wSPDG~~Laf~~~~~ 348 (428)
T PRK01029 297 FVSNKD--------GRPRIYIMQIDPEGQSPRLLTKKY--------------------RNSSCPAWSPDGKKIAFCSVIK 348 (428)
T ss_pred EEECCC--------CCceEEEEECcccccceEEeccCC--------------------CCccceeECCCCCEEEEEEcCC
Confidence 998764 2357999988642 233343211 0234678999999999988877
Q ss_pred CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 355 SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
+...|+.+|+++|+.++++..........|++||+.|+++.... ....||+.++.+++
T Consensus 349 g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl~~g~ 406 (428)
T PRK01029 349 GVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNS-NESELYLISLITKK 406 (428)
T ss_pred CCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCC-CCceEEEEECCCCC
Confidence 77899999999999999987654445578999999999887643 34679998886553
No 19
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.90 E-value=6.7e-22 Score=207.72 Aligned_cols=239 Identities=11% Similarity=0.044 Sum_probs=179.5
Q ss_pred ceEEEEec-CCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCe-EEEEeecCCCCCCCccCCCCC
Q 005093 55 SKLLVVRN-PENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSKPTFSLGSTK 131 (715)
Q Consensus 55 ~~la~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~-la~~~~~~~~~~~~~~~~~~~ 131 (715)
.++||+.. .+....+++.++ ++...+.++.. ... ..+.|||||++ ++|.+...
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~-~~~----------~~p~wSpDG~~~i~y~s~~~------------- 210 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKG-GLN----------IFPKWANKEQTAFYYTSYGE------------- 210 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccC-CCe----------EeEEECCCCCcEEEEEEccC-------------
Confidence 57777765 332367888888 55555555543 222 58999999997 55554431
Q ss_pred CCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCcc
Q 005093 132 GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSET 211 (715)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~ 211 (715)
+.++||++|+.+|+.+++ +........+.|||||++ |+|+....
T Consensus 211 ----------------------------~~~~Iyv~dl~tg~~~~l--t~~~g~~~~~~~SPDG~~----la~~~~~~-- 254 (419)
T PRK04043 211 ----------------------------RKPTLYKYNLYTGKKEKI--ASSQGMLVVSDVSKDGSK----LLLTMAPK-- 254 (419)
T ss_pred ----------------------------CCCEEEEEECCCCcEEEE--ecCCCcEEeeEECCCCCE----EEEEEccC--
Confidence 237899999999999999 444434556889999999 99987432
Q ss_pred ceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccc
Q 005093 212 RKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 291 (715)
Q Consensus 212 ~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~ 291 (715)
.+.+||++|+ .++..++||........|.|||||++|+|++++. +
T Consensus 255 ----------g~~~Iy~~dl-----------------~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~--------g 299 (419)
T PRK04043 255 ----------GQPDIYLYDT-----------------NTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRL--------G 299 (419)
T ss_pred ----------CCcEEEEEEC-----------------CCCcEEEcccCCCccCccEECCCCCEEEEEECCC--------C
Confidence 3458999997 7888999998777677899999999999999874 2
Q ss_pred cceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC------CeeEEEEEECC
Q 005093 292 TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG------SSQVIISVNVS 365 (715)
Q Consensus 292 ~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~------~~~~l~~~d~~ 365 (715)
..+||++|+.+++.++++... .....|+|||+.|+++.... +..+||.+|++
T Consensus 300 ~~~Iy~~dl~~g~~~rlt~~g----------------------~~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~ 357 (419)
T PRK04043 300 YPNIFMKKLNSGSVEQVVFHG----------------------KNNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN 357 (419)
T ss_pred CceEEEEECCCCCeEeCccCC----------------------CcCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC
Confidence 468999999988876665321 11347999999999988654 33689999999
Q ss_pred CCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 366 SGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 366 tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+|+.++|+.... ...+.|+|||+.|+++... ..-..|+.++++..
T Consensus 358 ~g~~~~LT~~~~-~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~ 402 (419)
T PRK04043 358 SDYIRRLTANGV-NQFPRFSSDGGSIMFIKYL-GNQSALGIIRLNYN 402 (419)
T ss_pred CCCeEECCCCCC-cCCeEECCCCCEEEEEEcc-CCcEEEEEEecCCC
Confidence 999999998643 2347899999999998765 44556888887643
No 20
>PRK13604 luxD acyl transferase; Provisional
Probab=99.89 E-value=7.6e-22 Score=192.70 Aligned_cols=224 Identities=13% Similarity=0.088 Sum_probs=152.2
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCC-CCCchhhhhcCCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGS-LGFGEEALQSLPGK 535 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~-~~~g~~~~~~~~~~ 535 (715)
....+|..|.||+..|++. ..++.++||++||-... ...+...+.+|+++||.|+.+|+||. |+++.++...
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~--~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~---- 86 (307)
T PRK13604 14 ICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARR--MDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF---- 86 (307)
T ss_pred EEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCC--hHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC----
Confidence 3456899999999999742 35678899999995443 23477889999999999999999875 5544433211
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeecc
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 615 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (715)
.......|+.++++|+.++. .++|+|+||||||.+++.+|.. + .++++|+.||+.++.......-...+......
T Consensus 87 t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~-~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~ 161 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINE-I-DLSFLITAVGVVNLRDTLERALGYDYLSLPID 161 (307)
T ss_pred cccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcC-C-CCCEEEEcCCcccHHHHHHHhhhcccccCccc
Confidence 11123789999999998863 4689999999999998766653 3 49999999999986533321000000000000
Q ss_pred CCCCCCCCCCCCC--hhhHHHH------HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC
Q 005093 616 GSKGKDSFTESPS--VEDLTRF------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 687 (715)
Q Consensus 616 ~~~~~~~~~~~~~--~~~~~~~------~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 687 (715)
.......+.+... ....... ...+|+..+.+++.|+|++||+.|..||++.+++++++++. .++++++++
T Consensus 162 ~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~ 239 (307)
T PRK13604 162 ELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLI 239 (307)
T ss_pred ccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeC
Confidence 0000000111111 0111111 12455677888899999999999999999999999998753 468899999
Q ss_pred CCCccCC
Q 005093 688 NDVHGIE 694 (715)
Q Consensus 688 ~~~H~~~ 694 (715)
|+.|.+.
T Consensus 240 Ga~H~l~ 246 (307)
T PRK13604 240 GSSHDLG 246 (307)
T ss_pred CCccccC
Confidence 9999886
No 21
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.89 E-value=3.6e-21 Score=204.90 Aligned_cols=241 Identities=17% Similarity=0.156 Sum_probs=180.5
Q ss_pred ceEEEEecCCCC--CCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCC
Q 005093 55 SKLLVVRNPENE--SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK 131 (715)
Q Consensus 55 ~~la~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~ 131 (715)
++|||+....++ ..+++.++ +++..++++...... ..++|||||++|+|++...
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~----------~~p~wSPDG~~la~~s~~~------------- 220 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPL----------MSPAWSPDGSKLAYVTFES------------- 220 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCce----------eeeEEcCCCCEEEEEEecC-------------
Confidence 789999875322 45677777 566677776543333 6899999999999986432
Q ss_pred CCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCcc
Q 005093 132 GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSET 211 (715)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~ 211 (715)
+..+||++++++|+.+.+ +........+.|||||+. |+|+....
T Consensus 221 ----------------------------g~~~i~i~dl~~G~~~~l--~~~~~~~~~~~~SPDG~~----La~~~~~~-- 264 (429)
T PRK03629 221 ----------------------------GRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDGSK----LAFALSKT-- 264 (429)
T ss_pred ----------------------------CCcEEEEEECCCCCeEEc--cCCCCCcCCeEECCCCCE----EEEEEcCC--
Confidence 237899999999998888 333334567899999999 99986422
Q ss_pred ceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccc
Q 005093 212 RKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 291 (715)
Q Consensus 212 ~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~ 291 (715)
...+||++|+ ++++.++++........|.|||||++|+|.+.+. +
T Consensus 265 ----------g~~~I~~~d~-----------------~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~--------g 309 (429)
T PRK03629 265 ----------GSLNLYVMDL-----------------ASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQA--------G 309 (429)
T ss_pred ----------CCcEEEEEEC-----------------CCCCEEEccCCCCCcCceEECCCCCEEEEEeCCC--------C
Confidence 2247999997 7888899998777788999999999999999764 2
Q ss_pred cceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 005093 292 TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 371 (715)
Q Consensus 292 ~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 371 (715)
..+||++++.+++.++++... .....+.|+|||+.|++.....+...|+.+|+++++.+.
T Consensus 310 ~~~Iy~~d~~~g~~~~lt~~~--------------------~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~ 369 (429)
T PRK03629 310 RPQVYKVNINGGAPQRITWEG--------------------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV 369 (429)
T ss_pred CceEEEEECCCCCeEEeecCC--------------------CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEE
Confidence 358999999887665554211 012356799999999998877777889999999999999
Q ss_pred ecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 372 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 372 l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
|+.... .....|++||..|++...... ...+++.+++.
T Consensus 370 Lt~~~~-~~~p~~SpDG~~i~~~s~~~~-~~~l~~~~~~G 407 (429)
T PRK03629 370 LTDTFL-DETPSIAPNGTMVIYSSSQGM-GSVLNLVSTDG 407 (429)
T ss_pred eCCCCC-CCCceECCCCCEEEEEEcCCC-ceEEEEEECCC
Confidence 886432 234689999999998876433 34577777643
No 22
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.89 E-value=4.4e-21 Score=204.57 Aligned_cols=239 Identities=17% Similarity=0.193 Sum_probs=179.1
Q ss_pred ceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC
Q 005093 55 SKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 133 (715)
Q Consensus 55 ~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 133 (715)
.+|||+...+ +..+++.++ ++...++++...... ..++|||||++|+|.+...
T Consensus 164 ~~iayv~~~~-~~~~L~~~D~dG~~~~~l~~~~~~v----------~~p~wSPDG~~la~~s~~~--------------- 217 (427)
T PRK02889 164 TRIAYVIKTG-NRYQLQISDADGQNAQSALSSPEPI----------ISPAWSPDGTKLAYVSFES--------------- 217 (427)
T ss_pred cEEEEEEccC-CccEEEEECCCCCCceEeccCCCCc----------ccceEcCCCCEEEEEEccC---------------
Confidence 6799998653 556788777 454556666443333 7899999999999986432
Q ss_pred CCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccce
Q 005093 134 SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRK 213 (715)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~ 213 (715)
...+||++|+++|+.+++ +........++|||||++ |+|+...+
T Consensus 218 --------------------------~~~~I~~~dl~~g~~~~l--~~~~g~~~~~~~SPDG~~----la~~~~~~---- 261 (427)
T PRK02889 218 --------------------------KKPVVYVHDLATGRRRVV--ANFKGSNSAPAWSPDGRT----LAVALSRD---- 261 (427)
T ss_pred --------------------------CCcEEEEEECCCCCEEEe--ecCCCCccceEECCCCCE----EEEEEccC----
Confidence 237799999999998888 333334567899999999 99976322
Q ss_pred eeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccc
Q 005093 214 LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 293 (715)
Q Consensus 214 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~ 293 (715)
...+||.+|+ .++..++++........|.|||||++|+|.+++. +..
T Consensus 262 --------g~~~Iy~~d~-----------------~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~--------g~~ 308 (427)
T PRK02889 262 --------GNSQIYTVNA-----------------DGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRG--------GAP 308 (427)
T ss_pred --------CCceEEEEEC-----------------CCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCC--------CCc
Confidence 2358999997 7778889988776678899999999999998763 235
Q ss_pred eeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 294 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 294 ~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
+||.+++.++..++++... .....+.|+|||+.|++.+...+...|+.+|+.+++.++++
T Consensus 309 ~Iy~~~~~~g~~~~lt~~g--------------------~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt 368 (427)
T PRK02889 309 QIYRMPASGGAAQRVTFTG--------------------SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALT 368 (427)
T ss_pred EEEEEECCCCceEEEecCC--------------------CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEcc
Confidence 7999998776654443111 01235679999999998887777778999999999999887
Q ss_pred CCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 374 PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 374 ~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
..... ....|+++++.|++....... ..++..+++
T Consensus 369 ~~~~~-~~p~~spdg~~l~~~~~~~g~-~~l~~~~~~ 403 (427)
T PRK02889 369 DTTRD-ESPSFAPNGRYILYATQQGGR-SVLAAVSSD 403 (427)
T ss_pred CCCCc-cCceECCCCCEEEEEEecCCC-EEEEEEECC
Confidence 65332 446899999999998876554 568877764
No 23
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.89 E-value=4.2e-21 Score=205.04 Aligned_cols=243 Identities=14% Similarity=0.131 Sum_probs=172.0
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 92 (715)
+...||++|.++.+ ..+|+... ..+..|+|||||++|||++..+ +..+++..+ .+|+.+.++......
T Consensus 182 ~~~~i~i~d~dg~~--~~~lt~~~-----~~v~~p~wSPDG~~la~~s~~~-~~~~i~i~dl~tg~~~~l~~~~g~~--- 250 (429)
T PRK01742 182 QPYEVRVADYDGFN--QFIVNRSS-----QPLMSPAWSPDGSKLAYVSFEN-KKSQLVVHDLRSGARKVVASFRGHN--- 250 (429)
T ss_pred ceEEEEEECCCCCC--ceEeccCC-----CccccceEcCCCCEEEEEEecC-CCcEEEEEeCCCCceEEEecCCCcc---
Confidence 45789998776554 45555544 5678999999999999998654 566788777 666666665443322
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
..++|||||++|+|..... +..+||++|++++
T Consensus 251 -------~~~~wSPDG~~La~~~~~~-----------------------------------------g~~~Iy~~d~~~~ 282 (429)
T PRK01742 251 -------GAPAFSPDGSRLAFASSKD-----------------------------------------GVLNIYVMGANGG 282 (429)
T ss_pred -------CceeECCCCCEEEEEEecC-----------------------------------------CcEEEEEEECCCC
Confidence 5799999999999975432 1257999999999
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
+.+++ +........+.|||||+. |+|.+...+ ..+||.+++ .++.
T Consensus 283 ~~~~l--t~~~~~~~~~~wSpDG~~----i~f~s~~~g------------~~~I~~~~~-----------------~~~~ 327 (429)
T PRK01742 283 TPSQL--TSGAGNNTEPSWSPDGQS----ILFTSDRSG------------SPQVYRMSA-----------------SGGG 327 (429)
T ss_pred CeEee--ccCCCCcCCEEECCCCCE----EEEEECCCC------------CceEEEEEC-----------------CCCC
Confidence 99998 444445678999999999 999874322 248999986 5565
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
.+.++. .. ..+.|||||++|++.+.. .++++|+.++..+.++...
T Consensus 328 ~~~l~~-~~--~~~~~SpDG~~ia~~~~~------------~i~~~Dl~~g~~~~lt~~~-------------------- 372 (429)
T PRK01742 328 ASLVGG-RG--YSAQISADGKTLVMINGD------------NVVKQDLTSGSTEVLSSTF-------------------- 372 (429)
T ss_pred eEEecC-CC--CCccCCCCCCEEEEEcCC------------CEEEEECCCCCeEEecCCC--------------------
Confidence 555532 22 468999999999998642 3788898887654443221
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEee
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 386 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~ 386 (715)
....+.|+|||+.|++.+.+++...++.++.+++..+++....+....+.|+|
T Consensus 373 -~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 373 -LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred -CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCC
Confidence 12356799999999888876666667777876666777765444334445554
No 24
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.88 E-value=9.8e-21 Score=202.31 Aligned_cols=241 Identities=16% Similarity=0.181 Sum_probs=178.6
Q ss_pred CceEEEEecCCCC--CCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCC
Q 005093 54 GSKLLVVRNPENE--SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST 130 (715)
Q Consensus 54 g~~la~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~ 130 (715)
..++||+....+. ..+++.++ ++...+.++...... ..++|||||++|+|++...
T Consensus 182 ~~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~~~----------~~p~wSPDG~~La~~s~~~------------ 239 (448)
T PRK04792 182 LTRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPEPL----------MSPAWSPDGRKLAYVSFEN------------ 239 (448)
T ss_pred cCEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCCcc----------cCceECCCCCEEEEEEecC------------
Confidence 4688898765422 34666666 455566666554433 6899999999999986532
Q ss_pred CCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCc
Q 005093 131 KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSE 210 (715)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~ 210 (715)
+..+||++|+++|+.+.++ ........+.|||||+. |+|+...+
T Consensus 240 -----------------------------g~~~L~~~dl~tg~~~~lt--~~~g~~~~~~wSPDG~~----La~~~~~~- 283 (448)
T PRK04792 240 -----------------------------RKAEIFVQDIYTQVREKVT--SFPGINGAPRFSPDGKK----LALVLSKD- 283 (448)
T ss_pred -----------------------------CCcEEEEEECCCCCeEEec--CCCCCcCCeeECCCCCE----EEEEEeCC-
Confidence 2378999999999988883 33333457899999999 99986432
Q ss_pred cceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCcc
Q 005093 211 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHS 290 (715)
Q Consensus 211 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~ 290 (715)
...+||++|+ ++++.++++........|.|||||++|+|.+.+.
T Consensus 284 -----------g~~~Iy~~dl-----------------~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~-------- 327 (448)
T PRK04792 284 -----------GQPEIYVVDI-----------------ATKALTRITRHRAIDTEPSWHPDGKSLIFTSERG-------- 327 (448)
T ss_pred -----------CCeEEEEEEC-----------------CCCCeEECccCCCCccceEECCCCCEEEEEECCC--------
Confidence 2348999997 7888899988766678899999999999998764
Q ss_pred ccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 291 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 291 ~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
...+||++|+.+++.++++... . ....+.|+|||+.|+|.....+..+||.+|+++++.+
T Consensus 328 g~~~Iy~~dl~~g~~~~Lt~~g-----------------~---~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~ 387 (448)
T PRK04792 328 GKPQIYRVNLASGKVSRLTFEG-----------------E---QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ 387 (448)
T ss_pred CCceEEEEECCCCCEEEEecCC-----------------C---CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE
Confidence 2358999999887765554211 0 1124579999999999887777789999999999998
Q ss_pred EecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 371 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 371 ~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.++....+ ....|+++|+.|+++.... ....|++.+..
T Consensus 388 ~lt~~~~d-~~ps~spdG~~I~~~~~~~-g~~~l~~~~~~ 425 (448)
T PRK04792 388 VLTSTRLD-ESPSVAPNGTMVIYSTTYQ-GKQVLAAVSID 425 (448)
T ss_pred EccCCCCC-CCceECCCCCEEEEEEecC-CceEEEEEECC
Confidence 88765332 2358999999999877644 34468877764
No 25
>PRK10566 esterase; Provisional
Probab=99.88 E-value=2.2e-21 Score=192.85 Aligned_cols=226 Identities=16% Similarity=0.186 Sum_probs=149.6
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC----CC--ccc
Q 005093 467 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK----VG--SQD 540 (715)
Q Consensus 467 ~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~----~~--~~~ 540 (715)
.+.+.|.+ ..+++.|+||++||.+.. ...+...+..|+++||.|+++|+||. |.+........ +. ...
T Consensus 14 ~~~~~p~~-~~~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~---G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 14 VLHAFPAG-QRDTPLPTVFFYHGFTSS--KLVYSYFAVALAQAGFRVIMPDAPMH---GARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred eEEEcCCC-CCCCCCCEEEEeCCCCcc--cchHHHHHHHHHhCCCEEEEecCCcc---cccCCCccccchhhHHHHHHHH
Confidence 45666763 134568999999996554 34567788899999999999999994 33211000000 00 123
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecC-CcchhhhhccCCCCCCceeeeccCCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN-PLCNLALMVGTTDIPDWCYVESYGSKG 619 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (715)
.+|+.++++++.++..++.++|+++|||+||.+++.++.++|+...++++.. +... ...... .+. .... .
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~-----~~~~-~ 158 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFT--SLARTL-FPP-----LIPE-T 158 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHH--HHHHHh-ccc-----cccc-c
Confidence 5778888999988877899999999999999999999988876444433322 2211 110000 000 0000 0
Q ss_pred CCCCCCCCChhhHHHHHhcCchhhccCC-CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCc--EEEEEeCCCCccCCCC
Q 005093 620 KDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALREKGVE--TKVIVFPNDVHGIERP 696 (715)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~ 696 (715)
.... .........+...++...+.++ .+|+|++||++|.++|++++.+++++++.+|.+ ++++.+++++|.+.
T Consensus 159 ~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~-- 234 (249)
T PRK10566 159 AAQQ--AEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT-- 234 (249)
T ss_pred cccH--HHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--
Confidence 0000 0000111223334455556666 699999999999999999999999999988864 78899999999874
Q ss_pred CchHHHHHHHHHHHHHhc
Q 005093 697 QSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 697 ~~~~~~~~~i~~wl~~~l 714 (715)
.+.+..+.+||+++|
T Consensus 235 ---~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 ---PEALDAGVAFFRQHL 249 (249)
T ss_pred ---HHHHHHHHHHHHhhC
Confidence 357899999999875
No 26
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.88 E-value=1.8e-20 Score=200.62 Aligned_cols=243 Identities=14% Similarity=0.136 Sum_probs=179.3
Q ss_pred CCceEEEEecCCCC---CCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 005093 53 SGSKLLVVRNPENE---SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 128 (715)
Q Consensus 53 dg~~la~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 128 (715)
=+.+|||+....++ ..+++.++ .++..++++...... ..++|||||++|+|.+...
T Consensus 166 f~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v----------~~p~wSpDg~~la~~s~~~---------- 225 (433)
T PRK04922 166 FWTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPI----------LSPAWSPDGKKLAYVSFER---------- 225 (433)
T ss_pred ccceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCcc----------ccccCCCCCCEEEEEecCC----------
Confidence 35679998765322 23455555 455666776543333 6899999999999986432
Q ss_pred CCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeec
Q 005093 129 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 208 (715)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~ 208 (715)
+..+||++|+++|+.+.++ ........++|||||++ |+|+...
T Consensus 226 -------------------------------~~~~l~~~dl~~g~~~~l~--~~~g~~~~~~~SpDG~~----l~~~~s~ 268 (433)
T PRK04922 226 -------------------------------GRSAIYVQDLATGQRELVA--SFRGINGAPSFSPDGRR----LALTLSR 268 (433)
T ss_pred -------------------------------CCcEEEEEECCCCCEEEec--cCCCCccCceECCCCCE----EEEEEeC
Confidence 2378999999999988883 33334457899999999 9998643
Q ss_pred CccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCC
Q 005093 209 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 288 (715)
Q Consensus 209 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~ 288 (715)
. .+.+||++|+ .+++.++++........|.|||||++|+|.+.+.
T Consensus 269 ~------------g~~~Iy~~d~-----------------~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~------ 313 (433)
T PRK04922 269 D------------GNPEIYVMDL-----------------GSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRG------ 313 (433)
T ss_pred C------------CCceEEEEEC-----------------CCCCeEECccCCCCccceEECCCCCEEEEEECCC------
Confidence 2 2358999997 7888889987766677899999999999998764
Q ss_pred ccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 289 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
+..+||++++.+++.++++.... ....+.|+|||+.|++.....+...|+.+|+.+++
T Consensus 314 --g~~~iy~~dl~~g~~~~lt~~g~--------------------~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 314 --GRPQIYRVAASGGSAERLTFQGN--------------------YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred --CCceEEEEECCCCCeEEeecCCC--------------------CccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 23579999998877655542110 12356899999999998776667789999999999
Q ss_pred EEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 369 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 369 ~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
.+.++..... ....|+++|+.+++++... .-..|+..++.+
T Consensus 372 ~~~Lt~~~~~-~~p~~spdG~~i~~~s~~~-g~~~L~~~~~~g 412 (433)
T PRK04922 372 VRTLTPGSLD-ESPSFAPNGSMVLYATREG-GRGVLAAVSTDG 412 (433)
T ss_pred eEECCCCCCC-CCceECCCCCEEEEEEecC-CceEEEEEECCC
Confidence 9988865432 3468999999999988764 345688888753
No 27
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.87 E-value=4.3e-21 Score=180.93 Aligned_cols=250 Identities=15% Similarity=0.194 Sum_probs=171.7
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
.+.+.+|..+....+.|.. ..++..+|+++||.+... ...|...+..|+..||.|+++|++| +|.+......-.
T Consensus 31 ~~~n~rG~~lft~~W~p~~--~~~pr~lv~~~HG~g~~~-s~~~~~~a~~l~~~g~~v~a~D~~G---hG~SdGl~~yi~ 104 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLS--GTEPRGLVFLCHGYGEHS-SWRYQSTAKRLAKSGFAVYAIDYEG---HGRSDGLHAYVP 104 (313)
T ss_pred eEEcCCCCEeEEEecccCC--CCCCceEEEEEcCCcccc-hhhHHHHHHHHHhCCCeEEEeeccC---CCcCCCCcccCC
Confidence 4566788889888999963 347788999999954432 3567778999999999999999999 665542222222
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc------------C
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------T 603 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~------------~ 603 (715)
-...-++|+...++.+..+.....-+.+++||||||.+++.++.++|..+.++|+++|++-+..-.. .
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~ 184 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLS 184 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHH
Confidence 2223377888888877776555567899999999999999999999999999999999875432111 0
Q ss_pred CCCCCceeeecc-------CC--------CCCCCCCCCCChhhHHHHHh--cCchhhccCCCCcEEEEeeCCCCcCCchH
Q 005093 604 TDIPDWCYVESY-------GS--------KGKDSFTESPSVEDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSN 666 (715)
Q Consensus 604 ~~~~~~~~~~~~-------~~--------~~~~~~~~~~~~~~~~~~~~--~sp~~~~~~i~~P~Lii~G~~D~~v~~~~ 666 (715)
.-++.|.....- .. .....+.+.+.......+.. .+...++.++..|+||+||+.|.++.+..
T Consensus 185 ~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~ 264 (313)
T KOG1455|consen 185 KLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKV 264 (313)
T ss_pred HhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHH
Confidence 112333211100 00 00011111111111111111 11224577889999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEeCCCCccCC---CCCchHHHHHHHHHHHHHh
Q 005093 667 GLQYARALREKGVETKVIVFPNDVHGIE---RPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 667 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~wl~~~ 713 (715)
++++|+....+ +.++.+|||.-|.+. .+++.+.++..|++|++++
T Consensus 265 Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 265 SKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999988664 455779999999976 4677778999999999875
No 28
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.87 E-value=2.6e-20 Score=200.22 Aligned_cols=242 Identities=14% Similarity=0.161 Sum_probs=178.8
Q ss_pred CCceEEEEecCCC---CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 005093 53 SGSKLLVVRNPEN---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 128 (715)
Q Consensus 53 dg~~la~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 128 (715)
...+|||+..... +..+++.++ +++..+.++...... ..++|||||++|+|.+...
T Consensus 161 f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~----------~~p~wSpDG~~la~~s~~~---------- 220 (430)
T PRK00178 161 FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPI----------LSPRWSPDGKRIAYVSFEQ---------- 220 (430)
T ss_pred ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCce----------eeeeECCCCCEEEEEEcCC----------
Confidence 5568999875432 233566666 555666665543332 6899999999999986432
Q ss_pred CCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeec
Q 005093 129 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 208 (715)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~ 208 (715)
...+||++++++|+.+.++ ........+.|||||++ |+|+...
T Consensus 221 -------------------------------~~~~l~~~~l~~g~~~~l~--~~~g~~~~~~~SpDG~~----la~~~~~ 263 (430)
T PRK00178 221 -------------------------------KRPRIFVQNLDTGRREQIT--NFEGLNGAPAWSPDGSK----LAFVLSK 263 (430)
T ss_pred -------------------------------CCCEEEEEECCCCCEEEcc--CCCCCcCCeEECCCCCE----EEEEEcc
Confidence 2378999999999998883 33334557899999999 9998743
Q ss_pred CccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCC
Q 005093 209 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 288 (715)
Q Consensus 209 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~ 288 (715)
. ...+||++|+ ++++.++++........|.|||||++|+|.+.+.
T Consensus 264 ~------------g~~~Iy~~d~-----------------~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~------ 308 (430)
T PRK00178 264 D------------GNPEIYVMDL-----------------ASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRG------ 308 (430)
T ss_pred C------------CCceEEEEEC-----------------CCCCeEEcccCCCCcCCeEECCCCCEEEEEECCC------
Confidence 2 2358999997 7888889998777778899999999999998764
Q ss_pred ccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 289 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
+..+||++++.+++.++++... .....+.|+|||+.|++.....+...|+.+|+++++
T Consensus 309 --g~~~iy~~d~~~g~~~~lt~~~--------------------~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 309 --GKPQIYKVNVNGGRAERVTFVG--------------------NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred --CCceEEEEECCCCCEEEeecCC--------------------CCccceEECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence 2357999999887765554211 012346799999999998876677789999999999
Q ss_pred EEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 369 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 369 ~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.+.++....+. ...|+++|+.++++.....+ ..|+..++.
T Consensus 367 ~~~lt~~~~~~-~p~~spdg~~i~~~~~~~g~-~~l~~~~~~ 406 (430)
T PRK00178 367 VRILTDTSLDE-SPSVAPNGTMLIYATRQQGR-GVLMLVSIN 406 (430)
T ss_pred EEEccCCCCCC-CceECCCCCEEEEEEecCCc-eEEEEEECC
Confidence 99988754333 46899999999988765433 458887764
No 29
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=6.7e-21 Score=197.52 Aligned_cols=251 Identities=15% Similarity=0.185 Sum_probs=158.8
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
.+...+|..+++..+.|.+ .....++||++||.+... ...+...+..|+++||.|+++|+|| ||.+........
T Consensus 36 ~~~~~dg~~l~~~~~~~~~--~~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D~rG---hG~S~~~~~~~~ 109 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSS--SSPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALDLEG---HGRSEGLRAYVP 109 (330)
T ss_pred eEEcCCCCEEEEEEEecCC--CCCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEecCCC---CCCCCCccccCC
Confidence 3445689999998888753 224678999999965332 2245556778999999999999999 555431110001
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC-----------
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------- 604 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~----------- 604 (715)
......+|+.++++++......+..+++|+||||||.+++.++.++|++++++|+++|...........
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVA 189 (330)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHH
Confidence 112236788889998877543445689999999999999999999999999999999875432110000
Q ss_pred -CCCCceeee---ccCCC------------CCCCCCCCCChhhHHHHHh-c-CchhhccCCCCcEEEEeeCCCCcCCchH
Q 005093 605 -DIPDWCYVE---SYGSK------------GKDSFTESPSVEDLTRFHS-K-SPISHISKVKTPTIFLLGAQDLRVPVSN 666 (715)
Q Consensus 605 -~~~~~~~~~---~~~~~------------~~~~~~~~~~~~~~~~~~~-~-sp~~~~~~i~~P~Lii~G~~D~~v~~~~ 666 (715)
..+...... .+... ....+...+.......... . .....+.++++|+||+||++|.++|++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~ 269 (330)
T PLN02298 190 RFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDV 269 (330)
T ss_pred HHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHH
Confidence 000000000 00000 0000000000000000000 0 0123456788999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc---hHHHHHHHHHHHHHhc
Q 005093 667 GLQYARALREKGVETKVIVFPNDVHGIERPQS---DFESFLNIGLWFKKYC 714 (715)
Q Consensus 667 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~---~~~~~~~i~~wl~~~l 714 (715)
+..+++.+.. ...+++++++++|.+...+. ...+.+.+.+|+++++
T Consensus 270 ~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 270 SRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred HHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 9988887753 34678899999998764332 3457888999999875
No 30
>PHA02857 monoglyceride lipase; Provisional
Probab=99.87 E-value=7e-21 Score=192.45 Aligned_cols=242 Identities=16% Similarity=0.172 Sum_probs=158.1
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|..+.+.+|.|. ..+.|+|+++||.+.. ...|...+..|+++||.|+++|+|| +|.+..........
T Consensus 6 ~~~~g~~l~~~~~~~~----~~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G---~G~S~~~~~~~~~~ 76 (276)
T PHA02857 6 FNLDNDYIYCKYWKPI----TYPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIG---HGRSNGEKMMIDDF 76 (276)
T ss_pred ecCCCCEEEEEeccCC----CCCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCC---CCCCCCccCCcCCH
Confidence 4558899999999884 3456889999996543 5678888999999999999999999 55543211100111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-------------ccCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-------------VGTT 604 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-------------~~~~ 604 (715)
...++|+.++++++.+.. ...+++|+|||+||.+++.++.++|++++++|+.+|....... ....
T Consensus 77 ~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPN 154 (276)
T ss_pred HHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCC
Confidence 112567777777765542 3468999999999999999999999999999999997542110 0000
Q ss_pred C-CCCceeeeccCCC--------CCCCC-CCCCChhhHHHHHh--cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHH
Q 005093 605 D-IPDWCYVESYGSK--------GKDSF-TESPSVEDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 672 (715)
Q Consensus 605 ~-~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~--~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~ 672 (715)
. ...+. ...+... ..... .............. ......+.++++|+|+++|++|.++|++.+..+++
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~ 233 (276)
T PHA02857 155 KIVGKLC-PESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQ 233 (276)
T ss_pred CccCCCC-HhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHH
Confidence 0 00000 0000000 00000 00000000000000 01123567889999999999999999999988877
Q ss_pred HHHHcCCcEEEEEeCCCCccCCCCCc--hHHHHHHHHHHHHHhc
Q 005093 673 ALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 714 (715)
Q Consensus 673 ~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~wl~~~l 714 (715)
.+.. .+++.++++++|.+..+.. +.++++.+++||+++.
T Consensus 234 ~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 234 HANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 7633 4789999999998876544 7789999999998864
No 31
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=1.5e-20 Score=195.97 Aligned_cols=249 Identities=15% Similarity=0.172 Sum_probs=156.8
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
+.+.+|.++.+..+.|. ..++.|+||++||.+... ...|...+..|+++||.|+++|+|| +|.+.........
T Consensus 66 ~~~~~g~~l~~~~~~p~---~~~~~~~iv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G---~G~S~~~~~~~~~ 138 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPE---NSRPKAAVCFCHGYGDTC-TFFFEGIARKIASSGYGVFAMDYPG---FGLSEGLHGYIPS 138 (349)
T ss_pred EEcCCCCEEEEEEEecC---CCCCCeEEEEECCCCCcc-chHHHHHHHHHHhCCCEEEEecCCC---CCCCCCCCCCcCC
Confidence 34568899999999886 335678999999965432 1234567788999999999999999 5554311000001
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC------------C
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT------------T 604 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~------------~ 604 (715)
....++|+.++++.+......+..+++|+||||||.+++.++.++|++++++|+++|.......... .
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHH
Confidence 1112566667777665543344568999999999999999999999999999999986542110000 0
Q ss_pred CCCCceee------ec-cCCC---CC-----CCCCCCCCh-hhHHHHHh-cCchhhccCCCCcEEEEeeCCCCcCCchHH
Q 005093 605 DIPDWCYV------ES-YGSK---GK-----DSFTESPSV-EDLTRFHS-KSPISHISKVKTPTIFLLGAQDLRVPVSNG 667 (715)
Q Consensus 605 ~~~~~~~~------~~-~~~~---~~-----~~~~~~~~~-~~~~~~~~-~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~ 667 (715)
..+.+... .. +... .. ..+...... ...+.+.. ......+.++++|+|++||++|.++|+..+
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~ 298 (349)
T PLN02385 219 LLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVS 298 (349)
T ss_pred HCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHH
Confidence 00000000 00 0000 00 000000000 00111111 111234678899999999999999999998
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCccCCCCCc---hHHHHHHHHHHHHHhc
Q 005093 668 LQYARALREKGVETKVIVFPNDVHGIERPQS---DFESFLNIGLWFKKYC 714 (715)
Q Consensus 668 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~---~~~~~~~i~~wl~~~l 714 (715)
..+++.+.. ...+++++++++|.+...+. ...++..|++||++++
T Consensus 299 ~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 299 KFLYEKASS--SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHHHHcCC--CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 888877643 24678899999998765443 3348889999999875
No 32
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.85 E-value=1.8e-19 Score=193.66 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=176.0
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (715)
+....||+.|.++. +..+|+... ..+..|+|||||++|||+...+ +..+++.+. .+|+...+.......
T Consensus 167 ~~~~~l~~~d~~g~--~~~~l~~~~-----~~~~~p~~Spdg~~la~~~~~~-~~~~i~v~d~~~g~~~~~~~~~~~~-- 236 (417)
T TIGR02800 167 SRRYELQVADYDGA--NPQTITRSR-----EPILSPAWSPDGQKLAYVSFES-GKPEIYVQDLATGQREKVASFPGMN-- 236 (417)
T ss_pred CCcceEEEEcCCCC--CCEEeecCC-----CceecccCCCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEeecCCCCc--
Confidence 45678998776543 446665543 4478899999999999997665 556788777 566665555433322
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
..++|||||++|+|..... ...+||++++++
T Consensus 237 --------~~~~~spDg~~l~~~~~~~-----------------------------------------~~~~i~~~d~~~ 267 (417)
T TIGR02800 237 --------GAPAFSPDGSKLAVSLSKD-----------------------------------------GNPDIYVMDLDG 267 (417)
T ss_pred --------cceEECCCCCEEEEEECCC-----------------------------------------CCccEEEEECCC
Confidence 5789999999999975432 236799999999
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
++.+.++ ........+.|+|||+. |+|.+...+ ..+||.+++ .++
T Consensus 268 ~~~~~l~--~~~~~~~~~~~s~dg~~----l~~~s~~~g------------~~~iy~~d~-----------------~~~ 312 (417)
T TIGR02800 268 KQLTRLT--NGPGIDTEPSWSPDGKS----IAFTSDRGG------------SPQIYMMDA-----------------DGG 312 (417)
T ss_pred CCEEECC--CCCCCCCCEEECCCCCE----EEEEECCCC------------CceEEEEEC-----------------CCC
Confidence 9988883 33333457899999999 999874322 237999997 677
Q ss_pred CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 252 PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 252 ~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
..++++........|.|||||++|+|+.... ...+|+++|+.++..+.++...
T Consensus 313 ~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~--------~~~~i~~~d~~~~~~~~l~~~~------------------- 365 (417)
T TIGR02800 313 EVRRLTFRGGYNASPSWSPDGDLIAFVHREG--------GGFNIAVMDLDGGGERVLTDTG------------------- 365 (417)
T ss_pred CEEEeecCCCCccCeEECCCCCEEEEEEccC--------CceEEEEEeCCCCCeEEccCCC-------------------
Confidence 7778887666778899999999999998753 2457999999886554443211
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES 377 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~ 377 (715)
....+.|+|||+.|++.+..++...|+.++..++..+.++...+
T Consensus 366 --~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g 409 (417)
T TIGR02800 366 --LDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRARLPLGNG 409 (417)
T ss_pred --CCCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeECCCCCC
Confidence 12345799999999999988887788888876666666765443
No 33
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.85 E-value=1.8e-20 Score=194.81 Aligned_cols=317 Identities=15% Similarity=0.139 Sum_probs=203.9
Q ss_pred ccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecC
Q 005093 8 NLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP 86 (715)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 86 (715)
..-.......+|++|+++... ++|+.. ......+.|||||++|||+.+. .+|... .+++.+++|...
T Consensus 15 ~~~r~s~~~~y~i~d~~~~~~--~~l~~~-----~~~~~~~~~sP~g~~~~~v~~~-----nly~~~~~~~~~~~lT~dg 82 (353)
T PF00930_consen 15 KQWRHSFKGDYYIYDIETGEI--TPLTPP-----PPKLQDAKWSPDGKYIAFVRDN-----NLYLRDLATGQETQLTTDG 82 (353)
T ss_dssp EESSSEEEEEEEEEETTTTEE--EESS-E-----ETTBSEEEE-SSSTEEEEEETT-----EEEEESSTTSEEEESES--
T ss_pred EeeeeccceeEEEEecCCCce--EECcCC-----ccccccceeecCCCeeEEEecC-----ceEEEECCCCCeEEecccc
Confidence 334455778899988877543 444333 2568999999999999999876 488877 567777777642
Q ss_pred -----ccccccccCCC---cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCC
Q 005093 87 -----QTVHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAG 158 (715)
Q Consensus 87 -----~~~~~~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 158 (715)
.+..++||.++ ....+.|||||++|||...+...-.......+.......+. ...+.| |.-|+..
T Consensus 83 ~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~----~~~~~Y-Pk~G~~n-- 155 (353)
T PF00930_consen 83 EPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPE----VESIRY-PKAGDPN-- 155 (353)
T ss_dssp TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-E----EEEEE---BTTS----
T ss_pred ceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCc----cccccc-CCCCCcC--
Confidence 23344556554 34588999999999999866543222111111111110000 001112 2223321
Q ss_pred ccCceEEEEEccCCceEeecC----CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccc
Q 005093 159 KRQPSLFVININSGEVQAVKG----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 234 (715)
Q Consensus 159 ~~~~~l~~~~~~~g~~~~l~~----~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 234 (715)
....|+++++++++...+.. ...+.....+.|++|++. +++...... .....|+.+|+
T Consensus 156 -p~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~----l~~~~~nR~----------q~~~~l~~~d~--- 217 (353)
T PF00930_consen 156 -PRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKR----LWVQWLNRD----------QNRLDLVLCDA--- 217 (353)
T ss_dssp --EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEE----EEEEEEETT----------STEEEEEEEEE---
T ss_pred -CceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcE----EEEEEcccC----------CCEEEEEEEEC---
Confidence 33679999999998766531 123446778999999997 666532111 12235778886
Q ss_pred cchhhhhhhhccCCCCCCceecCCC--Ccc---ccceeEc-CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCc
Q 005093 235 KSEASELELKESSSEDLPVVNLTES--ISS---AFFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 308 (715)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~lt~~--~~~---~~~~~~s-pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~l 308 (715)
.++..+.+..+ .+. ...+.|. ++|..++|.+.++ +..+||+++..++..++|
T Consensus 218 --------------~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~--------G~~hly~~~~~~~~~~~l 275 (353)
T PF00930_consen 218 --------------STGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERD--------GYRHLYLYDLDGGKPRQL 275 (353)
T ss_dssp --------------CTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETT--------SSEEEEEEETTSSEEEES
T ss_pred --------------CCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcC--------CCcEEEEEcccccceecc
Confidence 55555444322 222 3345555 9999999999964 367999999999888899
Q ss_pred ccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee--CCeeEEEEEECC-CCcEEEecCCCCCceeEEEe
Q 005093 309 LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQVIISVNVS-SGELLRITPAESNFSWSLLT 385 (715)
Q Consensus 309 t~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~--~~~~~l~~~d~~-tg~~~~l~~~~~~~~~~~~s 385 (715)
|.+..++..+ +.|.++++.|||++.. ....+||+++++ +++.++|+...+.+....||
T Consensus 276 T~G~~~V~~i-------------------~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~S 336 (353)
T PF00930_consen 276 TSGDWEVTSI-------------------LGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFS 336 (353)
T ss_dssp S-SSS-EEEE-------------------EEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-
T ss_pred ccCceeeccc-------------------ceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEEC
Confidence 9887665432 3578888999999885 357899999999 99999999988766457999
Q ss_pred ecCCEEEEEEeCCCCCC
Q 005093 386 LDGDNIIAVSSSPVDVP 402 (715)
Q Consensus 386 ~~~~~l~~~~~~~~~p~ 402 (715)
++++.++..+++++.|+
T Consensus 337 pdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 337 PDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp TTSSEEEEEEESSSSCE
T ss_pred CCCCEEEEEEcCCCCCC
Confidence 99999999999999985
No 34
>PLN02442 S-formylglutathione hydrolase
Probab=99.85 E-value=6e-20 Score=184.19 Aligned_cols=233 Identities=15% Similarity=0.139 Sum_probs=149.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc---hHHHHHHHhCCcEEEEEcCCCCC--C----------Cc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY---SKSLAFLSSVGYSLLIVNYRGSL--G----------FG 525 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~---~~~~~~la~~G~~vi~~d~rG~~--~----------~g 525 (715)
-+..+...+|+|+. ...+++|+|+++||++... ..| ......++..|+.|++||..+.+ . .+
T Consensus 28 l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~--~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~ 104 (283)
T PLN02442 28 LGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTD--ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVG 104 (283)
T ss_pred cCCceEEEEEcCCc-ccCCCCCEEEEecCCCcCh--HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCC
Confidence 45678888999983 3457899999999966543 222 22345667889999999975422 0 01
Q ss_pred hhhh-hcCCCCCC-----ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh
Q 005093 526 EEAL-QSLPGKVG-----SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 599 (715)
Q Consensus 526 ~~~~-~~~~~~~~-----~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 599 (715)
.++. +.....+. ....+++...++.... .+|.++++|+|+||||++++.++.++|++|+++++.+|++++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~ 182 (283)
T PLN02442 105 AGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPIN 182 (283)
T ss_pred cceeeccccCCCcccchhhhHHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCccc
Confidence 1110 00001111 1112333333333222 26889999999999999999999999999999999999876331
Q ss_pred hccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCch-HHHHHHHHHHHcC
Q 005093 600 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVS-NGLQYARALREKG 678 (715)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~-~~~~~~~~l~~~g 678 (715)
.. +. ......+.+.+ ....+.+...+++..+...++|+|++||++|..++.. ++..+++++++.|
T Consensus 183 ~~-------~~------~~~~~~~~g~~-~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g 248 (283)
T PLN02442 183 CP-------WG------QKAFTNYLGSD-KADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAG 248 (283)
T ss_pred Cc-------hh------hHHHHHHcCCC-hhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcC
Confidence 10 10 00001111112 2233444445555666667899999999999999863 5788999999999
Q ss_pred CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 679 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+++++++++.+|.+. ....++++.+.|..+++|
T Consensus 249 ~~~~~~~~pg~~H~~~---~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 249 APVTLRLQPGYDHSYF---FIATFIDDHINHHAQALK 282 (283)
T ss_pred CCeEEEEeCCCCccHH---HHHHHHHHHHHHHHHHhc
Confidence 9999999999999875 222344455555555543
No 35
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.84 E-value=2.2e-20 Score=181.00 Aligned_cols=204 Identities=24% Similarity=0.325 Sum_probs=142.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCC--Cchh-----hhhcCCCCCC
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLG--FGEE-----ALQSLPGKVG 537 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~--~g~~-----~~~~~~~~~~ 537 (715)
+.+++..|++ .++.|.||++|+..+. .......++.|+++||.|++||+-+... .... ..........
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~~G~--~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDIFGL--NPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRP 75 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSH
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCCCCC--chHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhH
Confidence 4688999983 3789999999995433 2455567889999999999999764333 1110 0000000011
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 617 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (715)
.....|+.+++++|.+++.++.+||+++|+|+||.+++.++.+. +.++++|+..|...
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~--------------------- 133 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP--------------------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS---------------------
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC---------------------
Confidence 12356788999999999878899999999999999999998876 68999998877100
Q ss_pred CCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC
Q 005093 618 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 697 (715)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 697 (715)
+ ..+.....++++|+|+++|++|+.++.+....+.+.+++++.++++++|+|++|+|..+.
T Consensus 134 ---------~----------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 134 ---------P----------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPS 194 (218)
T ss_dssp ---------G----------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTT
T ss_pred ---------C----------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCC
Confidence 0 001223456789999999999999999999999999999999999999999999998643
Q ss_pred -------chHHHHHHHHHHHHHhc
Q 005093 698 -------SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 698 -------~~~~~~~~i~~wl~~~l 714 (715)
...+.++++++||++||
T Consensus 195 ~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 195 RPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp STT--HHHHHHHHHHHHHHHCC--
T ss_pred CcccCHHHHHHHHHHHHHHHHhcC
Confidence 24578889999999987
No 36
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=7.7e-20 Score=192.41 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=149.8
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|.++.|+++.|+ ..++.|+||++||.... ....|....+.|+++||.|+++|+||. |.+... + .
T Consensus 174 ~~~~g~~l~g~l~~P~---~~~~~P~Vli~gG~~~~-~~~~~~~~~~~La~~Gy~vl~~D~pG~---G~s~~~--~--~- 241 (414)
T PRK05077 174 PIPGGGPITGFLHLPK---GDGPFPTVLVCGGLDSL-QTDYYRLFRDYLAPRGIAMLTIDMPSV---GFSSKW--K--L- 241 (414)
T ss_pred EcCCCcEEEEEEEECC---CCCCccEEEEeCCcccc-hhhhHHHHHHHHHhCCCEEEEECCCCC---CCCCCC--C--c-
Confidence 3446778999999997 34678988876663322 123456677889999999999999994 433211 0 0
Q ss_pred ccch-hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh-hhcc-CCCCCCceeeec
Q 005093 538 SQDV-NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-LMVG-TTDIPDWCYVES 614 (715)
Q Consensus 538 ~~~~-~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~-~~~~-~~~~~~~~~~~~ 614 (715)
..+. ....++++++.+.+.+|.++|+++|||+||++++.++..+|++++++|+.+|+++.. .... ....+.. +...
T Consensus 242 ~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~-~~~~ 320 (414)
T PRK05077 242 TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEM-YLDV 320 (414)
T ss_pred cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHH-HHHH
Confidence 1112 223577889988888899999999999999999999998899999999999876421 0000 0000000 0000
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCch--hh-ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCc
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPI--SH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 691 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~--~~-~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 691 (715)
+... . .+...........+...+.. .. ..++++|+|+++|++|+++|++++..+.+.. .+.+++++|++ |
T Consensus 321 la~~-l-g~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~l~~i~~~-~ 393 (414)
T PRK05077 321 LASR-L-GMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGKLLEIPFK-P 393 (414)
T ss_pred HHHH-h-CCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCeEEEccCC-C
Confidence 0000 0 00000000111111112211 11 2568899999999999999999888665443 34778899986 3
Q ss_pred cCCCCCchHHHHHHHHHHHHHhcC
Q 005093 692 GIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+ +...+++..+.+||+++|.
T Consensus 394 ~~---e~~~~~~~~i~~wL~~~l~ 414 (414)
T PRK05077 394 VY---RNFDKALQEISDWLEDRLC 414 (414)
T ss_pred cc---CCHHHHHHHHHHHHHHHhC
Confidence 23 3456889999999999873
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=99.84 E-value=4.2e-19 Score=183.34 Aligned_cols=245 Identities=20% Similarity=0.225 Sum_probs=153.8
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
.+...+|..++...+.|. .+.++||++||.... ...|...+..|+++||.|+++|+|| +|.+........
T Consensus 34 ~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~--~~~y~~~~~~l~~~g~~v~~~D~~G---~G~S~~~~~~~~ 103 (330)
T PRK10749 34 EFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIES--YVKYAELAYDLFHLGYDVLIIDHRG---QGRSGRLLDDPH 103 (330)
T ss_pred EEEcCCCCEEEEEEccCC-----CCCcEEEEECCccch--HHHHHHHHHHHHHCCCeEEEEcCCC---CCCCCCCCCCCC
Confidence 445668888888777653 235789999995432 3456677778899999999999999 554421100000
Q ss_pred CC-----ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc--------
Q 005093 536 VG-----SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-------- 602 (715)
Q Consensus 536 ~~-----~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------- 602 (715)
.+ ..-++|+.++++.+... .+..++.++||||||.+++.++.++|++++++|+.+|.........
T Consensus 104 ~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 181 (330)
T PRK10749 104 RGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRIL 181 (330)
T ss_pred cCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHH
Confidence 01 11144555555554433 2457899999999999999999999999999999998653210000
Q ss_pred -----CCCCCC-cee-eeccCC-CCCCCCCCCCChhh---HHHHHhcC----------------------chhhccCCCC
Q 005093 603 -----TTDIPD-WCY-VESYGS-KGKDSFTESPSVED---LTRFHSKS----------------------PISHISKVKT 649 (715)
Q Consensus 603 -----~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~~---~~~~~~~s----------------------p~~~~~~i~~ 649 (715)
...... ... ...+.. ........ ..... .......+ ....+.++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (330)
T PRK10749 182 NWAEGHPRIRDGYAIGTGRWRPLPFAINVLT-HSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT 260 (330)
T ss_pred HHHHHhcCCCCcCCCCCCCCCCCCcCCCCCC-CCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC
Confidence 000000 000 000000 00000000 00000 00000011 1234567889
Q ss_pred cEEEEeeCCCCcCCchHHHHHHHHHHHcCC---cEEEEEeCCCCccCCCCCc--hHHHHHHHHHHHHHh
Q 005093 650 PTIFLLGAQDLRVPVSNGLQYARALREKGV---ETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKY 713 (715)
Q Consensus 650 P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~wl~~~ 713 (715)
|+|+++|++|.+++++.+..+++.+++++. .++++++++++|....+.. +..+++.|++||+++
T Consensus 261 P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 261 PLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999887653 4589999999999876554 667899999999875
No 38
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.84 E-value=1.9e-19 Score=187.31 Aligned_cols=240 Identities=17% Similarity=0.180 Sum_probs=179.0
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (715)
......+|+.|-+ +.+...++... ..+..|.|||||+.|+|+.-..+.++++|.+. ..++..++.......
T Consensus 169 ~~~~~~l~~~D~d--g~~~~~l~~~~-----~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~- 240 (425)
T COG0823 169 GPLPYELALGDYD--GYNQQKLTDSG-----SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNN- 240 (425)
T ss_pred CCCCceEEEEccC--CcceeEecccC-----cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCcc-
Confidence 3456678886655 33445554444 45688999999999999976654447888888 777777776644433
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
..++|||||++|+|...+. +..+||++|+.
T Consensus 241 ---------~~P~fspDG~~l~f~~~rd-----------------------------------------g~~~iy~~dl~ 270 (425)
T COG0823 241 ---------GAPAFSPDGSKLAFSSSRD-----------------------------------------GSPDIYLMDLD 270 (425)
T ss_pred ---------CCccCCCCCCEEEEEECCC-----------------------------------------CCccEEEEcCC
Confidence 6899999999999987654 34889999999
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
++..++|+ ........+.|||||+. |+|++.+.+ ..+||++++ ++
T Consensus 271 ~~~~~~Lt--~~~gi~~~Ps~spdG~~----ivf~Sdr~G------------~p~I~~~~~-----------------~g 315 (425)
T COG0823 271 GKNLPRLT--NGFGINTSPSWSPDGSK----IVFTSDRGG------------RPQIYLYDL-----------------EG 315 (425)
T ss_pred CCcceecc--cCCccccCccCCCCCCE----EEEEeCCCC------------CcceEEECC-----------------CC
Confidence 99988884 44444458999999999 999985433 248999997 88
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC-CCCcccceeeeeeceecCCCCCccc
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG-NFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
+..+++|...+....|.|||||++|+|.+... | ..++...++.++. .+.++...
T Consensus 316 ~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~----g----~~~i~~~~~~~~~~~~~lt~~~----------------- 370 (425)
T COG0823 316 SQVTRLTFSGGGNSNPVWSPDGDKIVFESSSG----G----QWDIDKNDLASGGKIRILTSTY----------------- 370 (425)
T ss_pred CceeEeeccCCCCcCccCCCCCCEEEEEeccC----C----ceeeEEeccCCCCcEEEccccc-----------------
Confidence 88899998888777999999999999999542 2 2678888887766 33343322
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
....+.|.+||+.+.+.+...+...|+.+...+.....+.
T Consensus 371 ----~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~g~~~~~~~ 410 (425)
T COG0823 371 ----LNESPSWAPNGRMIMFSSGQGGGSVLSLVSLDGRVSRPLP 410 (425)
T ss_pred ----cCCCCCcCCCCceEEEeccCCCCceEEEeeccceeEEEEe
Confidence 2346689999999999888777888998887444333333
No 39
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.83 E-value=3.1e-19 Score=178.96 Aligned_cols=233 Identities=12% Similarity=0.075 Sum_probs=150.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHH-HhCCcEEEEEcC--CCCCCCch--hhh------
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFL-SSVGYSLLIVNY--RGSLGFGE--EAL------ 529 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~l-a~~G~~vi~~d~--rG~~~~g~--~~~------ 529 (715)
.+.++...+|.|+++. .++.|+|+++||.+.......+...+..+ ++.||.|++||. ||.+..+. .|.
T Consensus 23 ~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred cCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 4677888999998653 35689999999976543222222223334 567999999997 55332111 110
Q ss_pred ---hcCCCCCC--ccchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC
Q 005093 530 ---QSLPGKVG--SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT 603 (715)
Q Consensus 530 ---~~~~~~~~--~~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~ 603 (715)
+.....+. ......+.+.+..+++. ..++.++++|+|+||||++++.++.++|++++++++++|+.+....
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~--- 178 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC--- 178 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC---
Confidence 00000000 01122334444444443 4478899999999999999999999999999999999998764211
Q ss_pred CCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhcc--CCCCcEEEEeeCCCCcCCc-hHHHHHHHHHHHcCCc
Q 005093 604 TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHIS--KVKTPTIFLLGAQDLRVPV-SNGLQYARALREKGVE 680 (715)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~--~i~~P~Lii~G~~D~~v~~-~~~~~~~~~l~~~g~~ 680 (715)
.+. ......+.+... +.+...+|...+. ...+|+++.||+.|+.++. .++..+.++++++|++
T Consensus 179 ----~~~------~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~ 244 (275)
T TIGR02821 179 ----PWG------QKAFSAYLGADE----AAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQA 244 (275)
T ss_pred ----cch------HHHHHHHhcccc----cchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCC
Confidence 010 000001111111 1122334443333 2457999999999999998 6888999999999999
Q ss_pred EEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 681 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 681 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+++.++|+++|+|.... ..+...++|+.+++
T Consensus 245 v~~~~~~g~~H~f~~~~---~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 245 LTLRRQAGYDHSYYFIA---SFIADHLRHHAERL 275 (275)
T ss_pred eEEEEeCCCCccchhHH---HhHHHHHHHHHhhC
Confidence 99999999999987543 56778888887764
No 40
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.83 E-value=1.7e-18 Score=185.07 Aligned_cols=233 Identities=17% Similarity=0.161 Sum_probs=163.5
Q ss_pred CceEEEEecCCCC--CCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCC
Q 005093 54 GSKLLVVRNPENE--SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST 130 (715)
Q Consensus 54 g~~la~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~ 130 (715)
+++|||+....++ ...++..+ ++...+.++...... ..++|||||++|+|.+...
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v----------~~p~wSPDG~~la~~s~~~------------ 225 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPL----------MSPAWSPDGSKLAYVSFEN------------ 225 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCcc----------ccceEcCCCCEEEEEEecC------------
Confidence 6899999865422 24565555 454555555433333 7899999999999986532
Q ss_pred CCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCc
Q 005093 131 KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSE 210 (715)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~ 210 (715)
...+||++|+++|+.+.++ ........++|||||+. |+|....+
T Consensus 226 -----------------------------~~~~i~i~dl~tg~~~~l~--~~~g~~~~~~wSPDG~~----La~~~~~~- 269 (429)
T PRK01742 226 -----------------------------KKSQLVVHDLRSGARKVVA--SFRGHNGAPAFSPDGSR----LAFASSKD- 269 (429)
T ss_pred -----------------------------CCcEEEEEeCCCCceEEEe--cCCCccCceeECCCCCE----EEEEEecC-
Confidence 2378999999999887773 32233457899999999 99976322
Q ss_pred cceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCcc
Q 005093 211 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHS 290 (715)
Q Consensus 211 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~ 290 (715)
...+||.+|+ .++..++++........|.|||||++|+|.+.+.
T Consensus 270 -----------g~~~Iy~~d~-----------------~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~-------- 313 (429)
T PRK01742 270 -----------GVLNIYVMGA-----------------NGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRS-------- 313 (429)
T ss_pred -----------CcEEEEEEEC-----------------CCCCeEeeccCCCCcCCEEECCCCCEEEEEECCC--------
Confidence 2237999997 7788889998777788999999999999998764
Q ss_pred ccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 291 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 291 ~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
+..+||.++..++..+.++.. . ..+.|+|||+.|++... ..++.+|+.+|+.+
T Consensus 314 g~~~I~~~~~~~~~~~~l~~~----------------------~-~~~~~SpDG~~ia~~~~----~~i~~~Dl~~g~~~ 366 (429)
T PRK01742 314 GSPQVYRMSASGGGASLVGGR----------------------G-YSAQISADGKTLVMING----DNVVKQDLTSGSTE 366 (429)
T ss_pred CCceEEEEECCCCCeEEecCC----------------------C-CCccCCCCCCEEEEEcC----CCEEEEECCCCCeE
Confidence 235799998776544322100 1 24579999998888654 35888999999988
Q ss_pred EecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 371 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 371 ~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
.++.... .....|+++|+.|++.... ..-..+++.+.
T Consensus 367 ~lt~~~~-~~~~~~sPdG~~i~~~s~~-g~~~~l~~~~~ 403 (429)
T PRK01742 367 VLSSTFL-DESPSISPNGIMIIYSSTQ-GLGKVLQLVSA 403 (429)
T ss_pred EecCCCC-CCCceECCCCCEEEEEEcC-CCceEEEEEEC
Confidence 8765432 2346799999988887653 23333444443
No 41
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=1.7e-18 Score=176.87 Aligned_cols=221 Identities=15% Similarity=0.163 Sum_probs=154.5
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~-~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
.+...+|.|.. ...|+||++|||++.... ..+...+..|+. .|+.|+++|||.++++ .....+
T Consensus 68 ~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-----------~~p~~~ 132 (318)
T PRK10162 68 QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-----------RFPQAI 132 (318)
T ss_pred ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-----------CCCCcH
Confidence 58889999952 246999999999876543 345667777776 6999999999986653 122348
Q ss_pred hhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhC------CCceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 542 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 542 ~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
+|+.++++|+.++ ..+|+++|+|+|+|+||.+++.++.+. +.+++++++++|+.+..... .+.
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~------s~~-- 204 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSV------SRR-- 204 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCCh------hHH--
Confidence 8999999998764 347889999999999999999888643 35789999999987642110 000
Q ss_pred eccCCCCCCCCCCCCChhhHHHHH---------hcCchh-----hccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC
Q 005093 613 ESYGSKGKDSFTESPSVEDLTRFH---------SKSPIS-----HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 678 (715)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~sp~~-----~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g 678 (715)
.+... +.. ......+.+. ..+|.. .+...-+|++|++|+.|..+ +++..++++|+++|
T Consensus 205 -~~~~~----~~~-l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aG 276 (318)
T PRK10162 205 -LLGGV----WDG-LTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQ 276 (318)
T ss_pred -HhCCC----ccc-cCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcC
Confidence 00000 000 0001111110 112221 12123379999999999987 68999999999999
Q ss_pred CcEEEEEeCCCCccCCCC----CchHHHHHHHHHHHHHhcC
Q 005093 679 VETKVIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~~l~ 715 (715)
++++++++++..|+|... ....+.++.+.+||+++++
T Consensus 277 v~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 277 QPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998643 2244678899999999875
No 42
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.82 E-value=4.3e-18 Score=183.07 Aligned_cols=244 Identities=15% Similarity=0.145 Sum_probs=178.4
Q ss_pred CCCCceEEEEecCC-CCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 005093 51 SPSGSKLLVVRNPE-NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 128 (715)
Q Consensus 51 Spdg~~la~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 128 (715)
.+.+.+++|++..+ ++...++.++ +++..++++...... ..+.|||||++|+|.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~----------~~p~~Spdg~~la~~~~~~---------- 211 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPI----------LSPAWSPDGQKLAYVSFES---------- 211 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCce----------ecccCCCCCCEEEEEEcCC----------
Confidence 45678999998764 3556688777 556677776543323 5889999999999975432
Q ss_pred CCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeec
Q 005093 129 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 208 (715)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~ 208 (715)
+..+|+++|+++|+.+.+. ........+.|||||+. |+|+...
T Consensus 212 -------------------------------~~~~i~v~d~~~g~~~~~~--~~~~~~~~~~~spDg~~----l~~~~~~ 254 (417)
T TIGR02800 212 -------------------------------GKPEIYVQDLATGQREKVA--SFPGMNGAPAFSPDGSK----LAVSLSK 254 (417)
T ss_pred -------------------------------CCcEEEEEECCCCCEEEee--cCCCCccceEECCCCCE----EEEEECC
Confidence 2367999999999887773 33333456899999999 9987632
Q ss_pred CccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCC
Q 005093 209 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 288 (715)
Q Consensus 209 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~ 288 (715)
. ...+||.+++ .++..++++........|.|+|||++|+|.+.+.
T Consensus 255 ~------------~~~~i~~~d~-----------------~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~------ 299 (417)
T TIGR02800 255 D------------GNPDIYVMDL-----------------DGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRG------ 299 (417)
T ss_pred C------------CCccEEEEEC-----------------CCCCEEECCCCCCCCCCEEECCCCCEEEEEECCC------
Confidence 2 2347999997 7778888887666667899999999999998764
Q ss_pred ccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 289 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
...+||++++.+++.+.++... .....+.|+|||+.|+++....+..+|+.+|+.++.
T Consensus 300 --g~~~iy~~d~~~~~~~~l~~~~--------------------~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 300 --GSPQIYMMDADGGEVRRLTFRG--------------------GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG 357 (417)
T ss_pred --CCceEEEEECCCCCEEEeecCC--------------------CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence 2347999998876654443211 023466899999999998877777899999999988
Q ss_pred EEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 369 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 369 ~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.+.++.... .....|+++++.|++.+..... ..+++.+.+
T Consensus 358 ~~~l~~~~~-~~~p~~spdg~~l~~~~~~~~~-~~l~~~~~~ 397 (417)
T TIGR02800 358 ERVLTDTGL-DESPSFAPNGRMILYATTRGGR-GVLGLVSTD 397 (417)
T ss_pred eEEccCCCC-CCCceECCCCCEEEEEEeCCCc-EEEEEEECC
Confidence 887775433 2335899999999988876544 466666643
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.82 E-value=6.3e-19 Score=183.79 Aligned_cols=246 Identities=13% Similarity=0.111 Sum_probs=155.9
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
.+...++..+....+.|. ...+.|+||++||.+.. ...|...+..|+++||.|+++|+|| ||.+........
T Consensus 114 ~~~~~~~~~l~~~~~~p~---~~~~~~~Vl~lHG~~~~--~~~~~~~a~~L~~~Gy~V~~~D~rG---hG~S~~~~~~~~ 185 (395)
T PLN02652 114 LFYGARRNALFCRSWAPA---AGEMRGILIIIHGLNEH--SGRYLHFAKQLTSCGFGVYAMDWIG---HGGSDGLHGYVP 185 (395)
T ss_pred EEECCCCCEEEEEEecCC---CCCCceEEEEECCchHH--HHHHHHHHHHHHHCCCEEEEeCCCC---CCCCCCCCCCCc
Confidence 455667778888888885 34457899999996543 3456778889999999999999999 554432111001
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcchhhhhcc---------C
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLALMVG---------T 603 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~~~~~~~~---------~ 603 (715)
......+|+.++++++.... +..+++|+||||||.+++.++. +|+ +++++|+.+|...+..... .
T Consensus 186 ~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~ 262 (395)
T PLN02652 186 SLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFS 262 (395)
T ss_pred CHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHH
Confidence 11122567888888887652 3357999999999999987764 564 7999999999764321000 0
Q ss_pred CCCCCceeee--ccCCCC-------CCCC------CCCCChhhHHHHHhcC--chhhccCCCCcEEEEeeCCCCcCCchH
Q 005093 604 TDIPDWCYVE--SYGSKG-------KDSF------TESPSVEDLTRFHSKS--PISHISKVKTPTIFLLGAQDLRVPVSN 666 (715)
Q Consensus 604 ~~~~~~~~~~--~~~~~~-------~~~~------~~~~~~~~~~~~~~~s--p~~~~~~i~~P~Lii~G~~D~~v~~~~ 666 (715)
.-.+.+.+.. ..+... ...+ .+.............. ....+.++++|+|++||++|.++|++.
T Consensus 263 ~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~ 342 (395)
T PLN02652 263 LVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLA 342 (395)
T ss_pred HhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHH
Confidence 0000000000 000000 0000 0000000000000000 123457789999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 667 GLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 667 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+..+++.+.. ...+++++++++|....+....++++.+.+||+.++
T Consensus 343 a~~l~~~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 343 SQDLYNEAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred HHHHHHhcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 9988887643 345688899999998766667789999999999875
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.81 E-value=1.2e-19 Score=162.27 Aligned_cols=212 Identities=17% Similarity=0.182 Sum_probs=150.9
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
.+|+++||..++ ......+.++|.++||.|.+|.|+|.+-....+.+..+.+| ++|+.++.++|.+.++ +.
T Consensus 16 ~AVLllHGFTGt--~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~e 86 (243)
T COG1647 16 RAVLLLHGFTGT--PRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---DE 86 (243)
T ss_pred EEEEEEeccCCC--cHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---Ce
Confidence 789999994433 55777888999999999999999995544444443333333 7899999999998764 78
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcC--
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKS-- 639 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-- 639 (715)
|+++|.||||.+++.+|.+.| .+++|.+|+............. ...+.. ..+.+.+.......+.+....
T Consensus 87 I~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~-~l~y~~-----~~kk~e~k~~e~~~~e~~~~~~~ 158 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEG-LLEYFR-----NAKKYEGKDQEQIDKEMKSYKDT 158 (243)
T ss_pred EEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHH-HHHHHH-----HhhhccCCCHHHHHHHHHHhhcc
Confidence 999999999999999999888 7888888876653211100000 000000 011111111111112222222
Q ss_pred --------------chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHH
Q 005093 640 --------------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLN 705 (715)
Q Consensus 640 --------------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 705 (715)
....++.|..|++++.|.+|+.+|.+.+..+++.+.. .+.++.+|++.||.+.....++++.+.
T Consensus 159 ~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~KeL~~~e~SgHVIt~D~Erd~v~e~ 236 (243)
T COG1647 159 PMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES--DDKELKWLEGSGHVITLDKERDQVEED 236 (243)
T ss_pred hHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC--CcceeEEEccCCceeecchhHHHHHHH
Confidence 2245678889999999999999999999999988865 467799999999999999999999999
Q ss_pred HHHHHHH
Q 005093 706 IGLWFKK 712 (715)
Q Consensus 706 i~~wl~~ 712 (715)
++.||+.
T Consensus 237 V~~FL~~ 243 (243)
T COG1647 237 VITFLEK 243 (243)
T ss_pred HHHHhhC
Confidence 9999963
No 45
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.80 E-value=2.1e-18 Score=172.87 Aligned_cols=244 Identities=15% Similarity=0.183 Sum_probs=155.1
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhh-hcCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL-QSLPG 534 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~-~~~~~ 534 (715)
.+...+|..+....+.+. ..+..+||++||.... ...|...+..|+.+||.|+++|.|| +|.+.. ....-
T Consensus 13 ~~~~~d~~~~~~~~~~~~----~~~~g~Vvl~HG~~Eh--~~ry~~la~~l~~~G~~V~~~D~RG---hG~S~r~~rg~~ 83 (298)
T COG2267 13 YFTGADGTRLRYRTWAAP----EPPKGVVVLVHGLGEH--SGRYEELADDLAARGFDVYALDLRG---HGRSPRGQRGHV 83 (298)
T ss_pred eeecCCCceEEEEeecCC----CCCCcEEEEecCchHH--HHHHHHHHHHHHhCCCEEEEecCCC---CCCCCCCCcCCc
Confidence 455668888888888764 2233899999996544 4467778999999999999999999 555531 11111
Q ss_pred CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh--hc-c--------C
Q 005093 535 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--MV-G--------T 603 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~--~~-~--------~ 603 (715)
.....-..|+...++.+... ....+++|+||||||.+++.++.+++..+.++|+.+|.+.... .. . .
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~ 161 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLL 161 (298)
T ss_pred hhHHHHHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccc
Confidence 11111134444444444433 2357899999999999999999999999999999999887652 10 0 0
Q ss_pred C-CCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCch-----------------------hhccCCCCcEEEEeeCCC
Q 005093 604 T-DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI-----------------------SHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 604 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-----------------------~~~~~i~~P~Lii~G~~D 659 (715)
. ..+.+...... ......-........ ......+|. .....+++|+||++|+.|
T Consensus 162 ~~~~p~~~~~~~~-~~~~~~~~~sr~~~~-~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D 239 (298)
T COG2267 162 GRIRPKLPVDSNL-LEGVLTDDLSRDPAE-VAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDD 239 (298)
T ss_pred cccccccccCccc-ccCcCcchhhcCHHH-HHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCC
Confidence 0 00000000000 000000000000111 111112221 124466799999999999
Q ss_pred CcCC-chHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch--HHHHHHHHHHHHHhc
Q 005093 660 LRVP-VSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD--FESFLNIGLWFKKYC 714 (715)
Q Consensus 660 ~~v~-~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~wl~~~l 714 (715)
.+++ .+...++++++... ..++++++|+.|....+... .++++.+.+|+.+++
T Consensus 240 ~vv~~~~~~~~~~~~~~~~--~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 240 RVVDNVEGLARFFERAGSP--DKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccccCcHHHHHHHHhcCCC--CceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 9998 56666665555332 36899999999998887777 889999999999875
No 46
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=5.1e-18 Score=163.69 Aligned_cols=207 Identities=20% Similarity=0.253 Sum_probs=159.6
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhh----hcCC----
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL----QSLP---- 533 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~----~~~~---- 533 (715)
+.++.+++..|+ ...+.|+||++|+..+. .......++.||.+||.|++||+-+..+-..... ....
T Consensus 11 ~~~~~~~~a~P~---~~~~~P~VIv~hei~Gl--~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 11 DGELPAYLARPA---GAGGFPGVIVLHEIFGL--NPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred CceEeEEEecCC---cCCCCCEEEEEecccCC--chHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 388999999998 44445999999995444 3467778999999999999999754222111110 0000
Q ss_pred CCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
.........|+.+++++|.+++.++.++|+++|+||||.+++.++.+.| .++++++..|..-..
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~--------------- 149 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD--------------- 149 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC---------------
Confidence 1111344789999999999998889999999999999999999998766 799999887743100
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
. .....++++|+|+.+|+.|..+|......+.+++..+++.+++.+|+++.|+|
T Consensus 150 --------------~------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F 203 (236)
T COG0412 150 --------------D------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGF 203 (236)
T ss_pred --------------c------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcccc
Confidence 0 01145788999999999999999999999999999988899999999999999
Q ss_pred CCCC----------chHHHHHHHHHHHHHhcC
Q 005093 694 ERPQ----------SDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 694 ~~~~----------~~~~~~~~i~~wl~~~l~ 715 (715)
..+. ...+.++++++||+++++
T Consensus 204 ~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 204 ANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred ccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 8542 235788999999999874
No 47
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.79 E-value=8.3e-18 Score=175.05 Aligned_cols=206 Identities=18% Similarity=0.217 Sum_probs=160.8
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
..+.|||||++|+|+..... +...+|++++++++...+
T Consensus 196 ~~p~ws~~~~~~~y~~f~~~----------------------------------------~~~~i~~~~l~~g~~~~i-- 233 (425)
T COG0823 196 LTPAWSPDGKKLAYVSFELG----------------------------------------GCPRIYYLDLNTGKRPVI-- 233 (425)
T ss_pred eccccCcCCCceEEEEEecC----------------------------------------CCceEEEEeccCCcccee--
Confidence 68999999999999854320 127899999999998877
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 259 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 259 (715)
.........++|||||++ |+|+..++ ...+||++|+ .+++..+|+..
T Consensus 234 ~~~~g~~~~P~fspDG~~----l~f~~~rd------------g~~~iy~~dl-----------------~~~~~~~Lt~~ 280 (425)
T COG0823 234 LNFNGNNGAPAFSPDGSK----LAFSSSRD------------GSPDIYLMDL-----------------DGKNLPRLTNG 280 (425)
T ss_pred eccCCccCCccCCCCCCE----EEEEECCC------------CCccEEEEcC-----------------CCCcceecccC
Confidence 455667778999999999 99998544 3358999998 77788889999
Q ss_pred CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCc
Q 005093 260 ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 339 (715)
Q Consensus 260 ~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 339 (715)
.+....|.|||||++|+|++.+. +..+||++++.++..+++|.... ....+.
T Consensus 281 ~gi~~~Ps~spdG~~ivf~Sdr~--------G~p~I~~~~~~g~~~~riT~~~~--------------------~~~~p~ 332 (425)
T COG0823 281 FGINTSPSWSPDGSKIVFTSDRG--------GRPQIYLYDLEGSQVTRLTFSGG--------------------GNSNPV 332 (425)
T ss_pred CccccCccCCCCCCEEEEEeCCC--------CCcceEEECCCCCceeEeeccCC--------------------CCcCcc
Confidence 99888999999999999999884 34589999999988877764431 122678
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCc-EEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
|+|||+.|+|.+..++...+...|+.++. .+.++.... .....+++++..+++..... .-+.++..+++
T Consensus 333 ~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~-~e~ps~~~ng~~i~~~s~~~-~~~~l~~~s~~ 402 (425)
T COG0823 333 WSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYL-NESPSWAPNGRMIMFSSGQG-GGSVLSLVSLD 402 (425)
T ss_pred CCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcccccc-CCCCCcCCCCceEEEeccCC-CCceEEEeecc
Confidence 99999999998866666778888888777 555555443 33467889999888887766 44556666644
No 48
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.79 E-value=9.1e-19 Score=176.11 Aligned_cols=242 Identities=18% Similarity=0.195 Sum_probs=150.5
Q ss_pred ccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC--
Q 005093 455 ANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-- 532 (715)
Q Consensus 455 ~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~-- 532 (715)
++|.+-+|.+|+|+++.|++ ..++.|+||.+||.+.. ...+.. ...++.+||+|+.+|.||.++.........
T Consensus 59 v~f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~--~~~~~~-~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~ 133 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGR--SGDPFD-LLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGG 133 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT----GGGHHH-HHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS
T ss_pred EEEEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCC--CCCccc-ccccccCCeEEEEecCCCCCCCCCCccccCCC
Confidence 46677789999999999985 45789999999995543 222322 335789999999999999663222211000
Q ss_pred --CC----CCC--------ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc-hh
Q 005093 533 --PG----KVG--------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NL 597 (715)
Q Consensus 533 --~~----~~~--------~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~-~~ 597 (715)
.+ ... ...+.|+..++++|.+++.+|.++|++.|.|.||.+++.+|+..+ +++++++..|.. ++
T Consensus 134 ~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~ 212 (320)
T PF05448_consen 134 TLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF 212 (320)
T ss_dssp -SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH
T ss_pred CCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch
Confidence 00 000 112579999999999999999999999999999999999999865 699888888854 44
Q ss_pred hhhccCCC-CCCceeeeccCCCCCCCCCCCC--ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHH
Q 005093 598 ALMVGTTD-IPDWCYVESYGSKGKDSFTESP--SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 674 (715)
Q Consensus 598 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l 674 (715)
........ ...+.-...+.. .....+ ..+..+.+...+....+.+|++|+|+..|-.|++||+......++.+
T Consensus 213 ~~~~~~~~~~~~y~~~~~~~~----~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i 288 (320)
T PF05448_consen 213 RRALELRADEGPYPEIRRYFR----WRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAI 288 (320)
T ss_dssp HHHHHHT--STTTHHHHHHHH----HHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC-
T ss_pred hhhhhcCCccccHHHHHHHHh----ccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhcc
Confidence 32221111 111100000000 000001 11223445667778889999999999999999999999998888888
Q ss_pred HHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 675 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 675 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.. +.++.+||..+|... .....++.++||.+|
T Consensus 289 ~~---~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 289 PG---PKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp -S---SEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred CC---CeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 53 589999999999664 222267899999875
No 49
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.76 E-value=4.9e-17 Score=166.44 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=140.4
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
....++|..++.. |... .....|.||++||.+.. ...|...+..|+++||.|+++|+|| ||.+.. +..
T Consensus 25 ~~~~~~~~~~~i~-y~~~---G~~~~~~lvliHG~~~~--~~~w~~~~~~L~~~gy~vi~~Dl~G---~G~S~~---~~~ 92 (302)
T PRK00870 25 DVDDGDGGPLRMH-YVDE---GPADGPPVLLLHGEPSW--SYLYRKMIPILAAAGHRVIAPDLIG---FGRSDK---PTR 92 (302)
T ss_pred eecCCCCceEEEE-EEec---CCCCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCEEEEECCCC---CCCCCC---CCC
Confidence 3344455555422 2222 22235789999996543 5578888888988899999999999 665521 111
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh------h---ccCC-C
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL------M---VGTT-D 605 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~------~---~~~~-~ 605 (715)
......++..+.+..++++ .+.+++.|+|||+||.+++.++.++|++++++|++++...... . .... .
T Consensus 93 ~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (302)
T PRK00870 93 REDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQY 170 (302)
T ss_pred cccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhccccc
Confidence 1122355555555555554 2457899999999999999999999999999999886421100 0 0000 0
Q ss_pred CCCc--------eeeeccCCCCCCCCCCCC-C--h-hhHHHHHh---cC-----------chhhccCCCCcEEEEeeCCC
Q 005093 606 IPDW--------CYVESYGSKGKDSFTESP-S--V-EDLTRFHS---KS-----------PISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 606 ~~~~--------~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~---~s-----------p~~~~~~i~~P~Lii~G~~D 659 (715)
.+.. .............+.... . . .....+.. .. -...+.++++|+|+++|++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 250 (302)
T PRK00870 171 SPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSD 250 (302)
T ss_pred CchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCC
Confidence 0000 000000000000000000 0 0 00000000 00 01235678999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
..+|... ..+.+.+... ....+++++++||....+. ...+.+.+.+|++++
T Consensus 251 ~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~-p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 251 PITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFLQEDS-GEELAEAVLEFIRAT 301 (302)
T ss_pred CcccCch-HHHHhhcccc-cccceeeecCCCccchhhC-hHHHHHHHHHHHhcC
Confidence 9998755 6665555431 1134778999999876444 468899999999875
No 50
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.76 E-value=1.2e-16 Score=179.12 Aligned_cols=208 Identities=14% Similarity=0.193 Sum_probs=147.0
Q ss_pred HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC--CC------------CceEEEEEe
Q 005093 502 SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL--AN------------PSKVTVVGG 567 (715)
Q Consensus 502 ~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~d------------~~~i~l~G~ 567 (715)
..++|+.+||+|+..|.||.++++..+ ...+..+.+|..++|+||..+.. .| ..+|+++|.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~-----~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCP-----TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcC-----ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 457899999999999999987665443 22345568999999999985421 12 579999999
Q ss_pred ChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCC----CCce------eee-ccCCC-CCCCCCC-CC-------
Q 005093 568 SHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI----PDWC------YVE-SYGSK-GKDSFTE-SP------- 627 (715)
Q Consensus 568 S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~----~~~~------~~~-~~~~~-~~~~~~~-~~------- 627 (715)
||||++++.+|+..|+.++++|..+++.++..++..... ..|. ... .+... ....+.. .+
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~ 425 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLA 425 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHh
Confidence 999999999999889999999999998876543311100 0000 000 00000 0000000 00
Q ss_pred ---------ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc
Q 005093 628 ---------SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 698 (715)
Q Consensus 628 ---------~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 698 (715)
.....+.|...++...++++++|+|++||..|..+++.++.++++++++++.+.++.+.++ +|.......
T Consensus 426 ~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~~~ 504 (767)
T PRK05371 426 ELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNNWQ 504 (767)
T ss_pred hhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCchh
Confidence 0011233455677788899999999999999999999999999999999899988877765 686554445
Q ss_pred hHHHHHHHHHHHHHhcC
Q 005093 699 DFESFLNIGLWFKKYCK 715 (715)
Q Consensus 699 ~~~~~~~i~~wl~~~l~ 715 (715)
..++.+.+.+||+++|+
T Consensus 505 ~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 505 SIDFRDTMNAWFTHKLL 521 (767)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 56788999999999985
No 51
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=3.1e-17 Score=152.12 Aligned_cols=209 Identities=16% Similarity=0.233 Sum_probs=147.8
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHH-HhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
++..|..+.+..+.|.. ...++++|.||.....+ ........| ...++.|+.+||+| +|.+.....
T Consensus 41 ~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYSG---yG~S~G~ps---- 107 (258)
T KOG1552|consen 41 KTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYSG---YGRSSGKPS---- 107 (258)
T ss_pred ecCCCCEEEEEEEcCcc----ccceEEEEcCCcccchH--HHHHHHHHHhhcccceEEEEeccc---ccccCCCcc----
Confidence 44567778888888752 35699999999633321 111122222 23589999999999 554432211
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-CCCCCceeeecc
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-TDIPDWCYVESY 615 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~ 615 (715)
.....+|+.++.+||.+... ..++|+|+|+|+|...++.+|++.| .+|+|+.+|+.+....... .....|
T Consensus 108 E~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~~------ 178 (258)
T KOG1552|consen 108 ERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTYC------ 178 (258)
T ss_pred cccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEEe------
Confidence 12458999999999999976 7899999999999999999999988 9999999999886544322 111100
Q ss_pred CCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 616 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
+..+.-+..+..+++|+|++||+.|+++++.++.+++++.+.+ ++-.+..|+||....
T Consensus 179 -------------------~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~ 236 (258)
T KOG1552|consen 179 -------------------FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIE 236 (258)
T ss_pred -------------------eccccccCcceeccCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCcccc
Confidence 0001114567778899999999999999999999999998763 677788899996542
Q ss_pred CCchHHHHHHHHHHHHH
Q 005093 696 PQSDFESFLNIGLWFKK 712 (715)
Q Consensus 696 ~~~~~~~~~~i~~wl~~ 712 (715)
-. .++++.+..|+..
T Consensus 237 ~~--~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 237 LY--PEYIEHLRRFISS 251 (258)
T ss_pred cC--HHHHHHHHHHHHH
Confidence 22 2466666666653
No 52
>PRK11460 putative hydrolase; Provisional
Probab=99.76 E-value=8e-17 Score=156.52 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=132.6
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCC----CCchhhhhcCCCCCCccc-------hhhHHH
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSL----GFGEEALQSLPGKVGSQD-------VNDVLT 546 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~----~~g~~~~~~~~~~~~~~~-------~~d~~~ 546 (715)
....|+||++||.+.+ ...+...+..|+..++.+..+.++|.. +.|..|.... ....... ...+.+
T Consensus 13 ~~~~~~vIlLHG~G~~--~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHGVGDN--PVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeCCCCC--hHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHHH
Confidence 4567899999996554 446777888888877655555555532 1123332111 0011111 223445
Q ss_pred HHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCC
Q 005093 547 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTES 626 (715)
Q Consensus 547 ~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (715)
.++++.++..++.++|+++|+|+||.+++.++.++|+.+.++++.++.... .
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-----------------~----------- 141 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-----------------L----------- 141 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-----------------c-----------
Confidence 566666666688899999999999999999998889888888776653210 0
Q ss_pred CChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHH
Q 005093 627 PSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNI 706 (715)
Q Consensus 627 ~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i 706 (715)
+. .....+|+|++||++|+++|++.+.++.+.|++.+.+++++++++++|.+. .+..+.+
T Consensus 142 ~~---------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~-----~~~~~~~ 201 (232)
T PRK11460 142 PE---------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID-----PRLMQFA 201 (232)
T ss_pred cc---------------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC-----HHHHHHH
Confidence 00 011358999999999999999999999999999999999999999999986 3567788
Q ss_pred HHHHHHhc
Q 005093 707 GLWFKKYC 714 (715)
Q Consensus 707 ~~wl~~~l 714 (715)
.+||.+.|
T Consensus 202 ~~~l~~~l 209 (232)
T PRK11460 202 LDRLRYTV 209 (232)
T ss_pred HHHHHHHc
Confidence 88888765
No 53
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.74 E-value=5.7e-17 Score=156.07 Aligned_cols=194 Identities=18% Similarity=0.116 Sum_probs=124.2
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHhCCcEEEEEcCCCCCCCchhh--hhcCCCCCCccchhh
Q 005093 467 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEA--LQSLPGKVGSQDVND 543 (715)
Q Consensus 467 ~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la~~G~~vi~~d~rG~~~~g~~~--~~~~~~~~~~~~~~d 543 (715)
+++|+|++. .+++|+||++||++........ ..+...+.+.||.|++||++|.++.+..+ ........+..+..+
T Consensus 1 ~~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 1 MYVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred CEEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 368899863 4678999999997755321110 12344556789999999999865332211 111111122345778
Q ss_pred HHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCC
Q 005093 544 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSF 623 (715)
Q Consensus 544 ~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (715)
+.++++++.++..+|+++|+|+|+|+||.+++.++.++|+++++++++++....... .. ..... .+
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~----~~-----~~~~~-----~~ 144 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS----SS-----ISATP-----QM 144 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc----cc-----hhhHh-----hc
Confidence 889999999887789999999999999999999999999999999888875321100 00 00000 00
Q ss_pred CCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHc
Q 005093 624 TESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 677 (715)
Q Consensus 624 ~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~ 677 (715)
...........+.... ........+|++|+||++|.+||++.+..+++++++.
T Consensus 145 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 145 CTAATAASVCRLVRGM-QSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CCCCCHHHHHHHHhcc-CCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 0001111111111110 1112233456889999999999999999999999875
No 54
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.74 E-value=3.3e-17 Score=168.04 Aligned_cols=233 Identities=21% Similarity=0.296 Sum_probs=157.7
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch--HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS--KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~--~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
+..+...+|.| ......+.|+||++|||++........ .....++..|+.|+.+|||..+++ ....
T Consensus 61 ~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-----------~~p~ 128 (312)
T COG0657 61 GDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-----------PFPA 128 (312)
T ss_pred CCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------CCCc
Confidence 34466789999 223556799999999999887655443 344566789999999999987664 2334
Q ss_pred chhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 540 DVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
.++|+.+++.|+.++. .+|+++|+++|+|.||.+++.++....+ ..++.++++|..+... . ......+...
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~~~~~~ 206 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLPGYGEA 206 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchhhcCCc
Confidence 5899999999999873 4899999999999999999998876443 5789999999988664 1 1111000000
Q ss_pred eccCCCC-----CCCCCCCCChhhHHHHHhcCchhh--ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEE
Q 005093 613 ESYGSKG-----KDSFTESPSVEDLTRFHSKSPISH--ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 685 (715)
Q Consensus 613 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~sp~~~--~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~ 685 (715)
..+.... ...+..... + ......+|+.. +.. -+|+++++|+.|.+.+ ++..+.++|+++|+++++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~--~-~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~ 280 (312)
T COG0657 207 DLLDAAAILAWFADLYLGAAP--D-REDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRV 280 (312)
T ss_pred cccCHHHHHHHHHHHhCcCcc--c-cCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEE
Confidence 0000000 000000000 0 00012333322 233 4789999999999986 88999999999999999999
Q ss_pred eCCCCccCCCCC--chHHHHHHHHHHHHHhc
Q 005093 686 FPNDVHGIERPQ--SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 686 ~~~~~H~~~~~~--~~~~~~~~i~~wl~~~l 714 (715)
+++..|.|.... .....+.++.+|++..+
T Consensus 281 ~~g~~H~f~~~~~~~a~~~~~~~~~~l~~~~ 311 (312)
T COG0657 281 YPGMIHGFDLLTGPEARSALRQIAAFLRAAL 311 (312)
T ss_pred eCCcceeccccCcHHHHHHHHHHHHHHHHhc
Confidence 999999884322 23455677888887544
No 55
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.73 E-value=4.8e-17 Score=162.22 Aligned_cols=226 Identities=19% Similarity=0.266 Sum_probs=158.5
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC---ccchHHHHHH-HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL---SSYSKSLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~---~~~~~~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+..++|+|.......+.|+|||+|||++...+ ..|......+ ++.+..|+.+|||-.+++ ...
T Consensus 72 ~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-----------~~P 140 (336)
T KOG1515|consen 72 TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-----------PFP 140 (336)
T ss_pred CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-----------CCC
Confidence 4467789999876555789999999999987653 4555556555 688999999999987664 344
Q ss_pred cchhhHHHHHHHHHHc----CCCCCceEEEEEeChhHHHHHHHHhhC------CCceeEEEecCCcchhhhhccCCCCCC
Q 005093 539 QDVNDVLTAIDHVIDM----GLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPD 608 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~----~~~d~~~i~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~~~~~~~~~~~~~~~~~ 608 (715)
..++|..+++.|+.++ ..+|.+||+|+|.|.||.+|..++.+. +..+++.|++.|++.............
T Consensus 141 a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~ 220 (336)
T KOG1515|consen 141 AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQN 220 (336)
T ss_pred ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHh
Confidence 4589999999999885 458999999999999999999887653 357899999999886543322110000
Q ss_pred ceeeeccCCCCCCCCCCCCChhhHHHHH--------------hcCchh-----hc-cCCCCcEEEEeeCCCCcCCchHHH
Q 005093 609 WCYVESYGSKGKDSFTESPSVEDLTRFH--------------SKSPIS-----HI-SKVKTPTIFLLGAQDLRVPVSNGL 668 (715)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~sp~~-----~~-~~i~~P~Lii~G~~D~~v~~~~~~ 668 (715)
...... ......+.++ ..+|.. .. ...-+|+|++.++.|... +++.
T Consensus 221 ~~~~~~------------~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~ 286 (336)
T KOG1515|consen 221 LNGSPE------------LARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGL 286 (336)
T ss_pred hcCCcc------------hhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhH
Confidence 000000 0000001110 112221 11 122356999999999877 8899
Q ss_pred HHHHHHHHcCCcEEEEEeCCCCccCCC--C--CchHHHHHHHHHHHHHh
Q 005093 669 QYARALREKGVETKVIVFPNDVHGIER--P--QSDFESFLNIGLWFKKY 713 (715)
Q Consensus 669 ~~~~~l~~~g~~~~~~~~~~~~H~~~~--~--~~~~~~~~~i~~wl~~~ 713 (715)
.+.++|++.|++++++.++++.|++.. + ....+..+.+.+|+++.
T Consensus 287 ~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 287 AYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999999999999999998653 2 24566778888888764
No 56
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.72 E-value=4.5e-17 Score=165.32 Aligned_cols=218 Identities=17% Similarity=0.238 Sum_probs=126.9
Q ss_pred CCcEEEEEcCCCCCCC-CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 480 CDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~-~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
..|.||++||.+.... +..+...+..+++.||.|+++|+|| +|.+..............+|+.++++. .+
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~l~~~l~~------l~ 99 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPG---FNKSDAVVMDEQRGLVNARAVKGLMDA------LD 99 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCC---CCCCCCCcCcccccchhHHHHHHHHHH------cC
Confidence 3467999999654421 1122234556778899999999999 555532110001111123444444333 25
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC------------CCCce----eeec--cCCCCC
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWC----YVES--YGSKGK 620 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~------------~~~~~----~~~~--~~~~~~ 620 (715)
.++++++||||||.+++.++.++|++++++|+++|............ ..... +... +.....
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLI 179 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccC
Confidence 67999999999999999999999999999999887421100000000 00000 0000 000000
Q ss_pred C-----CCC--CCCChhhHHHHH---------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 621 D-----SFT--ESPSVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 621 ~-----~~~--~~~~~~~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
. ... ..........+. ..+....+.++++|+|+++|++|..++++.+.++++.+. +++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~ 255 (282)
T TIGR03343 180 TEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLH 255 (282)
T ss_pred cHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEE
Confidence 0 000 000000000110 011123466889999999999999999888877776664 48889
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
+++++||....+. ...+.+.|.+|++
T Consensus 256 ~i~~agH~~~~e~-p~~~~~~i~~fl~ 281 (282)
T TIGR03343 256 VFSRCGHWAQWEH-ADAFNRLVIDFLR 281 (282)
T ss_pred EeCCCCcCCcccC-HHHHHHHHHHHhh
Confidence 9999999876444 4578888999985
No 57
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.72 E-value=3e-16 Score=161.43 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=144.1
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc--------------------c---c-hHHHHHHHhCCcEE
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS--------------------S---Y-SKSLAFLSSVGYSL 513 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~--------------------~---~-~~~~~~la~~G~~v 513 (715)
.+.+|..|..+.+.|+ .+..+|+++||-+...... . | ..+++.|+++||.|
T Consensus 3 ~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V 77 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSV 77 (332)
T ss_pred cCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcE
Confidence 4558888988888874 3567999999943322111 1 1 35688999999999
Q ss_pred EEEcCCCCCCCchhhhhcC-CCCCC--ccchhhHHHHHHHHHHc------------------CCCCCceEEEEEeChhHH
Q 005093 514 LIVNYRGSLGFGEEALQSL-PGKVG--SQDVNDVLTAIDHVIDM------------------GLANPSKVTVVGGSHGGF 572 (715)
Q Consensus 514 i~~d~rG~~~~g~~~~~~~-~~~~~--~~~~~d~~~~i~~l~~~------------------~~~d~~~i~l~G~S~GG~ 572 (715)
+++|+|| +|.+..... ..... ..-++|+...++.+.+. ..-...+++|+||||||.
T Consensus 78 ~~~D~rG---HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~ 154 (332)
T TIGR01607 78 YGLDLQG---HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN 154 (332)
T ss_pred EEecccc---cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH
Confidence 9999999 554331110 11111 11245666666665541 011135799999999999
Q ss_pred HHHHHHhhCCC--------ceeEEEecCCcchhhhhc----------------------cCCCCC--Cceee-----ecc
Q 005093 573 LTTHLIGQAPD--------KFVAAAARNPLCNLALMV----------------------GTTDIP--DWCYV-----ESY 615 (715)
Q Consensus 573 ~a~~~a~~~p~--------~~~~~v~~~~~~~~~~~~----------------------~~~~~~--~~~~~-----~~~ 615 (715)
+++.++.+++. .++++|+.+|...+.... ...... .+... ..+
T Consensus 155 i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 155 IALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDII 234 (332)
T ss_pred HHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHH
Confidence 99988765432 588999888875431100 000000 00000 000
Q ss_pred CCCCCCCCCCCCChhhHHHHHhcC--chhhccCC--CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCc
Q 005093 616 GSKGKDSFTESPSVEDLTRFHSKS--PISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 691 (715)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~s--p~~~~~~i--~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 691 (715)
..+ ...+...........+.... ....+.++ ++|+|+++|++|.+++++.+..+++++.. ..++++++++++|
T Consensus 235 ~~D-p~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~H 311 (332)
T TIGR01607 235 KFD-KFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMDH 311 (332)
T ss_pred hcC-ccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCCC
Confidence 000 00000000111111111110 01123445 68999999999999999888887776543 3467889999999
Q ss_pred cCCCCCchHHHHHHHHHHHH
Q 005093 692 GIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~ 711 (715)
.+..+....++++.+++||+
T Consensus 312 ~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 312 VITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCccCCCHHHHHHHHHHHhh
Confidence 98877667789999999986
No 58
>PLN02511 hydrolase
Probab=99.72 E-value=1.9e-16 Score=166.34 Aligned_cols=243 Identities=14% Similarity=0.106 Sum_probs=144.3
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.||..+....+.+.........|+||++||..+......+...+..+.++||.|+++|+||.++ +... .+..+...
T Consensus 79 ~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~---s~~~-~~~~~~~~ 154 (388)
T PLN02511 79 PDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCAD---SPVT-TPQFYSAS 154 (388)
T ss_pred CCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCC---CCCC-CcCEEcCC
Confidence 4555665433333211123457899999996554322122345666778999999999999543 3211 11112233
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCc--eeEEEecCCcchhhhhc----cCC---------
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK--FVAAAARNPLCNLALMV----GTT--------- 604 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~--~~~~v~~~~~~~~~~~~----~~~--------- 604 (715)
..+|+.++++++..+. ...++.++||||||.+++.++.++++. +.+++++++..++.... ...
T Consensus 155 ~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~ 232 (388)
T PLN02511 155 FTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALA 232 (388)
T ss_pred chHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHH
Confidence 4789999999998863 346899999999999999999999886 77777777655431000 000
Q ss_pred ---------------CCCCceeeeccCC-CC--------CCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCC
Q 005093 605 ---------------DIPDWCYVESYGS-KG--------KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL 660 (715)
Q Consensus 605 ---------------~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~ 660 (715)
....+.-...... .. .....+.. ...+.|...++...+.++++|+|+++|++|+
T Consensus 233 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~--~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDp 310 (388)
T PLN02511 233 KALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFK--SVDAYYSNSSSSDSIKHVRVPLLCIQAANDP 310 (388)
T ss_pred HHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCC--CHHHHHHHcCchhhhccCCCCeEEEEcCCCC
Confidence 0000000000000 00 00000000 1112344566777888999999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchH-----HHHHHHHHHHHHh
Q 005093 661 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF-----ESFLNIGLWFKKY 713 (715)
Q Consensus 661 ~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~-----~~~~~i~~wl~~~ 713 (715)
++|...... .+.+....+++++++++||....+.... -+.+.+.+||+..
T Consensus 311 i~p~~~~~~---~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 311 IAPARGIPR---EDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCCcccCcH---hHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 998764321 1222345688999999999755433221 1356788888764
No 59
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.72 E-value=6.8e-16 Score=148.75 Aligned_cols=225 Identities=18% Similarity=0.238 Sum_probs=139.5
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
..+..|+|+++||-+.. +..|......|+.+||.|+++|+|| ||.+.. +.......+..+...+..++..-
T Consensus 40 g~~~gP~illlHGfPe~--wyswr~q~~~la~~~~rviA~DlrG---yG~Sd~---P~~~~~Yt~~~l~~di~~lld~L- 110 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPES--WYSWRHQIPGLASRGYRVIAPDLRG---YGFSDA---PPHISEYTIDELVGDIVALLDHL- 110 (322)
T ss_pred cCCCCCEEEEEccCCcc--chhhhhhhhhhhhcceEEEecCCCC---CCCCCC---CCCcceeeHHHHHHHHHHHHHHh-
Confidence 45578999999997765 6688889999999999999999999 766542 33333344444444444444432
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-----CCCCCce---eeeccCCC----------
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDWC---YVESYGSK---------- 618 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~---------- 618 (715)
..+|+.++||++|+.+|..++..+|+++++.|+++........... .....+. +......+
T Consensus 111 -g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~ 189 (322)
T KOG4178|consen 111 -GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEM 189 (322)
T ss_pred -ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHH
Confidence 2589999999999999999999999999999988765541000000 0000000 00000000
Q ss_pred --------CCCC--CCC-----CC---Chhh-------------------HHHHHhcCc--hhhccCCCCcEEEEeeCCC
Q 005093 619 --------GKDS--FTE-----SP---SVED-------------------LTRFHSKSP--ISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 619 --------~~~~--~~~-----~~---~~~~-------------------~~~~~~~sp--~~~~~~i~~P~Lii~G~~D 659 (715)
.... +.. .+ .+++ .+.+....+ .....++++|+++++|+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D 269 (322)
T KOG4178|consen 190 LVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLD 269 (322)
T ss_pred hHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCc
Confidence 0000 000 00 0111 111111211 2345678899999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
.+.+...-.+.+++.... -.+.++++++||...+++ ..++.+.++.||++..
T Consensus 270 ~v~~~p~~~~~~rk~vp~--l~~~vv~~~~gH~vqqe~-p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 270 PVLPYPIFGELYRKDVPR--LTERVVIEGIGHFVQQEK-PQEVNQAILGFINSFS 321 (322)
T ss_pred ccccchhHHHHHHHhhcc--ccceEEecCCcccccccC-HHHHHHHHHHHHHhhc
Confidence 998876333444443221 236789999999776555 4589999999999864
No 60
>PLN02965 Probable pheophorbidase
Probab=99.72 E-value=5.6e-16 Score=154.36 Aligned_cols=214 Identities=17% Similarity=0.161 Sum_probs=129.4
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC-ce
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP-SK 561 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~-~~ 561 (715)
+||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... .. .....+++.+.+..+++. .+. ++
T Consensus 5 ~vvllHG~~~~--~~~w~~~~~~L~~~~~~via~Dl~G---~G~S~~~---~~-~~~~~~~~a~dl~~~l~~--l~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHG--AWCWYKLATLLDAAGFKSTCVDLTG---AGISLTD---SN-TVSSSDQYNRPLFALLSD--LPPDHK 73 (255)
T ss_pred EEEEECCCCCC--cCcHHHHHHHHhhCCceEEEecCCc---CCCCCCC---cc-ccCCHHHHHHHHHHHHHh--cCCCCC
Confidence 49999997654 4568888899989999999999999 5554211 11 122345555544444443 223 58
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc---hh---hhhc--cCCCCCCceee-eccCCCC-----C------C
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC---NL---ALMV--GTTDIPDWCYV-ESYGSKG-----K------D 621 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~---~~---~~~~--~~~~~~~~~~~-~~~~~~~-----~------~ 621 (715)
+.++||||||.+++.++.++|++++++|++++.. .. .... .......|... ....... . .
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999999999999999999999999888642 10 0000 00000011000 0000000 0 0
Q ss_pred CCCCCCChhhHHHH-Hh--cCch----------hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 622 SFTESPSVEDLTRF-HS--KSPI----------SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 622 ~~~~~~~~~~~~~~-~~--~sp~----------~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
.+............ .. ..+. ..+.++++|+|+++|++|..+|+..++.+.+.+.. .+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~----a~~~~i~~ 229 (255)
T PLN02965 154 YYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP----AQTYVLED 229 (255)
T ss_pred HHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc----ceEEEecC
Confidence 00000000000000 00 0000 12346889999999999999999877777666543 67889999
Q ss_pred CCccCCCCCchHHHHHHHHHHHHH
Q 005093 689 DVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+||....++ .+++.+.+.+|++.
T Consensus 230 ~GH~~~~e~-p~~v~~~l~~~~~~ 252 (255)
T PLN02965 230 SDHSAFFSV-PTTLFQYLLQAVSS 252 (255)
T ss_pred CCCchhhcC-HHHHHHHHHHHHHH
Confidence 999877544 44788888888765
No 61
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.71 E-value=1.6e-16 Score=158.75 Aligned_cols=216 Identities=15% Similarity=0.240 Sum_probs=132.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
.+.|+||++||.+.. ...|...+..|. +||.|+++|+|| +|.+.... ......++..+.+..+++. .+
T Consensus 11 ~~~~~iv~lhG~~~~--~~~~~~~~~~l~-~~~~vi~~D~~G---~G~S~~~~----~~~~~~~~~~~~~~~~i~~--~~ 78 (257)
T TIGR03611 11 ADAPVVVLSSGLGGS--GSYWAPQLDVLT-QRFHVVTYDHRG---TGRSPGEL----PPGYSIAHMADDVLQLLDA--LN 78 (257)
T ss_pred CCCCEEEEEcCCCcc--hhHHHHHHHHHH-hccEEEEEcCCC---CCCCCCCC----cccCCHHHHHHHHHHHHHH--hC
Confidence 457899999996554 445666666664 579999999999 55442110 1112355555555444444 24
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-----------cCCCCCCc-------eeeeccCCCC-
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-----------GTTDIPDW-------CYVESYGSKG- 619 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~-------~~~~~~~~~~- 619 (715)
..++.++|||+||.+++.++.++|++++++|++++........ .......+ .+...+....
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENA 158 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccc
Confidence 5789999999999999999999999999999888754321000 00000000 0000000000
Q ss_pred -------CCCCCCC-CCh---hhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 620 -------KDSFTES-PSV---EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 620 -------~~~~~~~-~~~---~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
....... ... .....+...+....+.++++|+|+++|++|..+|++.+..+++.+. ..+++.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~ 234 (257)
T TIGR03611 159 ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPY 234 (257)
T ss_pred hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECC
Confidence 0000000 000 0011122233345567889999999999999999988887776653 367888999
Q ss_pred CCccCCCCCchHHHHHHHHHHHH
Q 005093 689 DVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
+||.+... +..++.+.+.+||+
T Consensus 235 ~gH~~~~~-~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 235 GGHASNVT-DPETFNRALLDFLK 256 (257)
T ss_pred CCCCcccc-CHHHHHHHHHHHhc
Confidence 99987654 45578888988885
No 62
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=7.5e-17 Score=148.50 Aligned_cols=242 Identities=16% Similarity=0.196 Sum_probs=157.2
Q ss_pred ccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhh----
Q 005093 453 VSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEA---- 528 (715)
Q Consensus 453 ~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~---- 528 (715)
..++|+.-+|.+|.||+.+|.. ..++.|+||..||-....+ .| ..+-.++..||+|+.+|.||.+++..+-
T Consensus 57 ydvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g--~~-~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 57 YDVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGG--EW-HDMLHWAVAGYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred EEEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCC--Cc-cccccccccceeEEEEecccCCCccccCCCCC
Confidence 3457888899999999999984 4489999999999433321 22 1233467899999999999965542211
Q ss_pred hh-cCCCC-----------C-CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 529 LQ-SLPGK-----------V-GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 529 ~~-~~~~~-----------~-~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.. ..++. + ...-+.|+..+++-+.+...+|.+||++.|.|.||.+++.+++.. .+++++++..|.+
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl 210 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFL 210 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhccccccccc
Confidence 00 00100 0 011256899999999999889999999999999999999888864 5899999999976
Q ss_pred hhhhh-ccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHH
Q 005093 596 NLALM-VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 674 (715)
Q Consensus 596 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l 674 (715)
.-... ........+.-...|.. .......+-.+.+...+..+.+.+++.|+|+..|-.|++||+.-...+++++
T Consensus 211 ~df~r~i~~~~~~~ydei~~y~k-----~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l 285 (321)
T COG3458 211 SDFPRAIELATEGPYDEIQTYFK-----RHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNAL 285 (321)
T ss_pred ccchhheeecccCcHHHHHHHHH-----hcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcc
Confidence 42111 10000000000000000 0011112223344445556678899999999999999999999888888888
Q ss_pred HHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 675 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 675 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
.. +.++.+|+.-.|.-... -..+++..|++.
T Consensus 286 ~~---~K~i~iy~~~aHe~~p~----~~~~~~~~~l~~ 316 (321)
T COG3458 286 TT---SKTIEIYPYFAHEGGPG----FQSRQQVHFLKI 316 (321)
T ss_pred cC---CceEEEeeccccccCcc----hhHHHHHHHHHh
Confidence 54 35566777777854321 123346666654
No 63
>PRK10985 putative hydrolase; Provisional
Probab=99.71 E-value=6.2e-16 Score=159.19 Aligned_cols=227 Identities=14% Similarity=0.102 Sum_probs=136.9
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
..+.|+||++||.+...........+..|+++||.|+++|+||.++..... +........+|+..+++++.++.
T Consensus 55 ~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~----~~~~~~~~~~D~~~~i~~l~~~~-- 128 (324)
T PRK10985 55 ARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL----HRIYHSGETEDARFFLRWLQREF-- 128 (324)
T ss_pred CCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC----cceECCCchHHHHHHHHHHHHhC--
Confidence 345799999999655432223345778899999999999999954321111 11111224789999999998863
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCCc--eeEEEecCCcchhhhhccCCC----------------------CCCceee-
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPDK--FVAAAARNPLCNLALMVGTTD----------------------IPDWCYV- 612 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~~--~~~~v~~~~~~~~~~~~~~~~----------------------~~~~~~~- 612 (715)
...+++++||||||.+++.+++++++. +.++|++++..++........ ...|.-.
T Consensus 129 ~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 208 (324)
T PRK10985 129 GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTL 208 (324)
T ss_pred CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 346899999999999888777776543 788888887754321100000 0000000
Q ss_pred ----eccC-CCCCC----CCCCC--CChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcE
Q 005093 613 ----ESYG-SKGKD----SFTES--PSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 681 (715)
Q Consensus 613 ----~~~~-~~~~~----~~~~~--~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~ 681 (715)
.... ..... .+... ......+.+...++...+.++++|+|+++|++|++++.+....+. +....+
T Consensus 209 ~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~----~~~~~~ 284 (324)
T PRK10985 209 PINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPE----SLPPNV 284 (324)
T ss_pred cCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHH----HhCCCe
Confidence 0000 00000 00000 011223444456666778899999999999999999876554432 223457
Q ss_pred EEEEeCCCCccCCCCC----chHHHHHHHHHHHHHhc
Q 005093 682 KVIVFPNDVHGIERPQ----SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 682 ~~~~~~~~~H~~~~~~----~~~~~~~~i~~wl~~~l 714 (715)
++++++++||...... ...=.-+.+.+||+..+
T Consensus 285 ~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 285 EYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred EEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 8899999999644321 12123456888887654
No 64
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.70 E-value=2.3e-16 Score=160.97 Aligned_cols=220 Identities=16% Similarity=0.167 Sum_probs=132.7
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCC--CCCccchhhHHHHHHHHHHcCCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG--KVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~--~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
.|.||++||.+.+ ...|...+..|+++ |.|+++|+|| +|.+....... ......++++.+.+..+++.. .
T Consensus 29 ~~~vlllHG~~~~--~~~w~~~~~~L~~~-~~vi~~DlpG---~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l--~ 100 (294)
T PLN02824 29 GPALVLVHGFGGN--ADHWRKNTPVLAKS-HRVYAIDLLG---YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV--V 100 (294)
T ss_pred CCeEEEECCCCCC--hhHHHHHHHHHHhC-CeEEEEcCCC---CCCCCCCccccccccccCCHHHHHHHHHHHHHHh--c
Confidence 3789999996655 55788888888776 6999999999 55543211000 001234566666655555542 2
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC--------------CCCCc--eeee---------
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT--------------DIPDW--CYVE--------- 613 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~--------------~~~~~--~~~~--------- 613 (715)
.+++.|+||||||.+++.++.++|++++++|++++........... ....+ .+..
T Consensus 101 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (294)
T PLN02824 101 GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVK 180 (294)
T ss_pred CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHH
Confidence 4789999999999999999999999999999998753110000000 00000 0000
Q ss_pred -----ccCCC-C-----CCCCC---CCCC-hhhHHHHHhc----CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHH
Q 005093 614 -----SYGSK-G-----KDSFT---ESPS-VEDLTRFHSK----SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 674 (715)
Q Consensus 614 -----~~~~~-~-----~~~~~---~~~~-~~~~~~~~~~----sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l 674 (715)
.+... . ...+. ..+. ......+... .....+.++++|+|+++|++|..+|.+.+..+.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~-- 258 (294)
T PLN02824 181 NILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYAN-- 258 (294)
T ss_pred HHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHh--
Confidence 00000 0 00000 0000 0000011111 1123467889999999999999999877655433
Q ss_pred HHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 675 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 675 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.....++++++++||.... +....+.+.+.+|++++
T Consensus 259 --~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 259 --FDAVEDFIVLPGVGHCPQD-EAPELVNPLIESFVARH 294 (294)
T ss_pred --cCCccceEEeCCCCCChhh-hCHHHHHHHHHHHHhcC
Confidence 2234678999999997664 44557899999999864
No 65
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.70 E-value=8.6e-16 Score=155.06 Aligned_cols=229 Identities=13% Similarity=0.153 Sum_probs=137.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|.+++.+... .+...|.||++||.+.+ ...|...+..|.+ +|.|+++|+|| +|.+.... ....
T Consensus 10 ~~~~~~~~~~~-----~~~~~~plvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~~-----~~~~ 73 (276)
T TIGR02240 10 DGQSIRTAVRP-----GKEGLTPLLIFNGIGAN--LELVFPFIEALDP-DLEVIAFDVPG---VGGSSTPR-----HPYR 73 (276)
T ss_pred CCcEEEEEEec-----CCCCCCcEEEEeCCCcc--hHHHHHHHHHhcc-CceEEEECCCC---CCCCCCCC-----CcCc
Confidence 56677654432 11223579999995544 4467777777754 69999999999 66553211 1223
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-------CCCCCCc----
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-------TTDIPDW---- 609 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~~~~~---- 609 (715)
.+++.+.+..+++. .+.+++.|+||||||.+++.+|.++|++++++|++++......... .......
T Consensus 74 ~~~~~~~~~~~i~~--l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T TIGR02240 74 FPGLAKLAARMLDY--LDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS 151 (276)
T ss_pred HHHHHHHHHHHHHH--hCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc
Confidence 45555555444444 2457899999999999999999999999999999987653210000 0000000
Q ss_pred e---e-eeccCCC------CCCC----CCCCCChh-hHHHH--HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHH
Q 005093 610 C---Y-VESYGSK------GKDS----FTESPSVE-DLTRF--HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 672 (715)
Q Consensus 610 ~---~-~~~~~~~------~~~~----~~~~~~~~-~~~~~--~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~ 672 (715)
. . ...+... .... ........ ..... ........+.++++|+|+++|++|+.+|+..+.++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 152 HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0 0 0000000 0000 00000000 00000 0111224467889999999999999999988877776
Q ss_pred HHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 673 ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 673 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.+. ..+++++++ ||....+ ...++.+.+.+|+++.
T Consensus 232 ~~~----~~~~~~i~~-gH~~~~e-~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 232 RIP----NAELHIIDD-GHLFLIT-RAEAVAPIIMKFLAEE 266 (276)
T ss_pred hCC----CCEEEEEcC-CCchhhc-cHHHHHHHHHHHHHHh
Confidence 653 367778875 9976644 4568889999999864
No 66
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.70 E-value=3.2e-16 Score=138.86 Aligned_cols=225 Identities=19% Similarity=0.283 Sum_probs=157.2
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
+....|..++++++..- +...|+++++|+..++++. ...-..-.+.+.+..|+.++||| ||.+... +..
T Consensus 58 ~l~T~D~vtL~a~~~~~-----E~S~pTlLyfh~NAGNmGh-r~~i~~~fy~~l~mnv~ivsYRG---YG~S~Gs--psE 126 (300)
T KOG4391|consen 58 ELRTRDKVTLDAYLMLS-----ESSRPTLLYFHANAGNMGH-RLPIARVFYVNLKMNVLIVSYRG---YGKSEGS--PSE 126 (300)
T ss_pred EEEcCcceeEeeeeecc-----cCCCceEEEEccCCCcccc-hhhHHHHHHHHcCceEEEEEeec---cccCCCC--ccc
Confidence 44667889999999883 2378999999997666532 11122335678899999999999 6655321 111
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeecc
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 615 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (715)
. .-.-|..++++||..++..|..+++++|.|.||.+|..+|+++.+++.|+++...+..+..+.-..-.+ +
T Consensus 127 ~--GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p-------~ 197 (300)
T KOG4391|consen 127 E--GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP-------F 197 (300)
T ss_pred c--ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc-------c
Confidence 1 125688999999999999999999999999999999999999999999999988877664332111100 0
Q ss_pred CCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 616 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
.. +. .+.+-....| +....+.+-+.|.|++.|.+|++||+.+.+++++.-..+. .++..||++.|+-..
T Consensus 198 ~~---k~---i~~lc~kn~~---~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~--Krl~eFP~gtHNDT~ 266 (300)
T KOG4391|consen 198 PM---KY---IPLLCYKNKW---LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRT--KRLAEFPDGTHNDTW 266 (300)
T ss_pred hh---hH---HHHHHHHhhh---cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhh--hhheeCCCCccCceE
Confidence 00 00 0001111111 2223345667899999999999999999999988765543 458899999997442
Q ss_pred CCchHHHHHHHHHHHHHh
Q 005093 696 PQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 696 ~~~~~~~~~~i~~wl~~~ 713 (715)
.. ...++.|.+|+.+.
T Consensus 267 i~--dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 267 IC--DGYFQAIEDFLAEV 282 (300)
T ss_pred Ee--ccHHHHHHHHHHHh
Confidence 22 24677888888764
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.69 E-value=9.2e-16 Score=169.00 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=101.1
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC--CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS--LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~--~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
.+|.+|.+.+++|+ ..++.|+||++||.+.... ..........|+++||+|+++|+||.+.++..+. ...
T Consensus 4 ~DG~~L~~~~~~P~---~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~-----~~~ 75 (550)
T TIGR00976 4 RDGTRLAIDVYRPA---GGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD-----LLG 75 (550)
T ss_pred CCCCEEEEEEEecC---CCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE-----ecC
Confidence 47899999999997 3457999999999543321 0011224567899999999999999655443321 111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 598 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 598 (715)
....+|+.++|+|+.+++..+ .+|+++|+|+||.+++.+|..+|+.++++++.++..++.
T Consensus 76 ~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred cccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 346899999999999987655 699999999999999999999999999999999887754
No 68
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.68 E-value=1.3e-16 Score=154.09 Aligned_cols=191 Identities=24% Similarity=0.355 Sum_probs=123.2
Q ss_pred EEEEcCCCCCCCCccc-hHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHc---CCCC
Q 005093 484 IVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM---GLAN 558 (715)
Q Consensus 484 vv~iHGg~~~~~~~~~-~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~d 558 (715)
||++|||++....... ...+..+++ .|+.|+.+|||-+++ ......++|+.++++|+.++ ..+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-----------~~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-----------APFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-----------SSTTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-----------ccccccccccccceeeecccccccccc
Confidence 7999999988765433 345566664 999999999998544 23345689999999999997 3478
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhh-HH
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED-LT 633 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 633 (715)
.++|+|+|+|.||.+++.++....+ .++++++++|+.++..... ..+........ ..+........ ..
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~ 142 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDG----PSYDDSNENKD---DPFLPAPKIDWFWK 142 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSC----HHHHHHHHHST---TSSSBHHHHHHHHH
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccc----ccccccccccc---cccccccccccccc
Confidence 9999999999999999999875332 4899999999876610000 00000000000 00000000000 01
Q ss_pred H--------HHhcCchhh-ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC
Q 005093 634 R--------FHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 694 (715)
Q Consensus 634 ~--------~~~~sp~~~-~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 694 (715)
. ....+|+.. -.+--+|+++++|+.|..+ .++..++++|++.|++++++++++.+|.|.
T Consensus 143 ~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 143 LYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 1 113445443 1112368999999999876 688999999999999999999999999874
No 69
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.68 E-value=1.2e-15 Score=137.73 Aligned_cols=145 Identities=21% Similarity=0.369 Sum_probs=111.4
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceE
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 562 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i 562 (715)
+||++||++.. ...|...++.|+++||.|+.+|+++.+.. . ...++.++++++.+.. .+.++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~-~~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDS---D-----------GADAVERVLADIRAGY-PDPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTS---H-----------HSHHHHHHHHHHHHHH-CTCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCcc---c-----------hhHHHHHHHHHHHhhc-CCCCcE
Confidence 58999997654 55678889999999999999999984332 1 1235556666654432 278999
Q ss_pred EEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchh
Q 005093 563 TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS 642 (715)
Q Consensus 563 ~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 642 (715)
+++|||+||.+++.++.++ ++++++|+++|..+ ..
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~--------------------------------------------~~ 98 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD--------------------------------------------SE 98 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------------CH
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------------hh
Confidence 9999999999999999987 78999999888311 01
Q ss_pred hccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc
Q 005093 643 HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 643 ~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
.+.+.+.|+++++|++|..+++++..+++++++ .+.+++++++++|+
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 123455699999999999999998888888886 56899999999995
No 70
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.68 E-value=2.9e-15 Score=152.89 Aligned_cols=216 Identities=16% Similarity=0.222 Sum_probs=130.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.+ ...|...+..|++++ .|+++|+|| +|.+.... ......+..+.+..+++. +..+
T Consensus 27 g~~vvllHG~~~~--~~~w~~~~~~L~~~~-~via~D~~G---~G~S~~~~-----~~~~~~~~a~dl~~ll~~--l~~~ 93 (295)
T PRK03592 27 GDPIVFLHGNPTS--SYLWRNIIPHLAGLG-RCLAPDLIG---MGASDKPD-----IDYTFADHARYLDAWFDA--LGLD 93 (295)
T ss_pred CCEEEEECCCCCC--HHHHHHHHHHHhhCC-EEEEEcCCC---CCCCCCCC-----CCCCHHHHHHHHHHHHHH--hCCC
Confidence 4789999997654 457778888898886 999999999 66553211 112345555555555544 2347
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh---h----------ccCCCCCCceee--eccCCCCC-CCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL---M----------VGTTDIPDWCYV--ESYGSKGK-DSFT 624 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~---~----------~~~~~~~~~~~~--~~~~~~~~-~~~~ 624 (715)
++.++|||+||.+++.++.++|++++++|++++...... + ............ ..+..... ..+.
T Consensus 94 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
T PRK03592 94 DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSIL 173 (295)
T ss_pred CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCccc
Confidence 899999999999999999999999999999887432100 0 000000000000 00000000 0000
Q ss_pred CCCChhhHHHH-----------------HhcC--------------chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 625 ESPSVEDLTRF-----------------HSKS--------------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 625 ~~~~~~~~~~~-----------------~~~s--------------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
.....+....+ .... ....+.++++|+|+++|++|..+++....++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 253 (295)
T PRK03592 174 RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRS 253 (295)
T ss_pred ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHH
Confidence 00000000000 0000 0122466899999999999999966555555443
Q ss_pred HHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 674 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+.. ..++++++++||....+ ...++.+.+.+|+++.
T Consensus 254 ~~~---~~~~~~i~~~gH~~~~e-~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 254 WPN---QLEITVFGAGLHFAQED-SPEEIGAAIAAWLRRL 289 (295)
T ss_pred hhh---hcceeeccCcchhhhhc-CHHHHHHHHHHHHHHh
Confidence 322 36788999999987754 4568899999999864
No 71
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.67 E-value=3.4e-15 Score=143.31 Aligned_cols=241 Identities=16% Similarity=0.141 Sum_probs=150.4
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
++|..+......++ ...+.|.||.+||-.++........++..+.++||.|+++|.||+++.-.. .+.-+...
T Consensus 57 pdg~~~~ldw~~~p---~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~----~p~~yh~G 129 (345)
T COG0429 57 PDGGFIDLDWSEDP---RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT----SPRLYHSG 129 (345)
T ss_pred CCCCEEEEeeccCc---cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc----Ccceeccc
Confidence 34444443344432 445669999999955554455555678889999999999999997653221 23333344
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhH-HHHHHHHhhCCC-ceeEEEecCCcchhhhhccCCCCCCc-eee----
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGG-FLTTHLIGQAPD-KFVAAAARNPLCNLALMVGTTDIPDW-CYV---- 612 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG-~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~---- 612 (715)
..+|+..+++++.++. .+.++..+|.|+|| +++.+++.+..+ .+.+++.++...|+.......+...+ ...
T Consensus 130 ~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l 207 (345)
T COG0429 130 ETEDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYL 207 (345)
T ss_pred chhHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHH
Confidence 5699999999999974 46899999999999 555555544322 45666666655555322111111111 000
Q ss_pred ------------e---------------------ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCC
Q 005093 613 ------------E---------------------SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 613 ------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D 659 (715)
. .+.........+. .+..++|...|.+..+.+|.+|+||||..+|
T Consensus 208 ~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf--~da~dYYr~aSs~~~L~~Ir~PtLii~A~DD 285 (345)
T COG0429 208 LRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGF--ADAEDYYRQASSLPLLPKIRKPTLIINAKDD 285 (345)
T ss_pred HHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCC--CcHHHHHHhccccccccccccceEEEecCCC
Confidence 0 0000001111111 2455778888999999999999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC--C-ch-HHHHHHHHHHHHHhc
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP--Q-SD-FESFLNIGLWFKKYC 714 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~-~~-~~~~~~i~~wl~~~l 714 (715)
++++++........ .+..+.+...+.+||.-... . .. .=..+++.+||+.++
T Consensus 286 P~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 286 PFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred CCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 99986543322211 45678899999999963322 1 11 124567999998875
No 72
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.67 E-value=1.3e-15 Score=152.22 Aligned_cols=217 Identities=15% Similarity=0.147 Sum_probs=126.0
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
.....|.||++||.+.. ...|...+..|+ .+|.|+++|+|| +|.+.. ... ..+++..+.+..+++.
T Consensus 12 ~~~~~~~iv~lhG~~~~--~~~~~~~~~~l~-~~~~vi~~D~~G---~G~s~~---~~~---~~~~~~~~d~~~~l~~-- 77 (255)
T PRK10673 12 NPHNNSPIVLVHGLFGS--LDNLGVLARDLV-NDHDIIQVDMRN---HGLSPR---DPV---MNYPAMAQDLLDTLDA-- 77 (255)
T ss_pred CCCCCCCEEEECCCCCc--hhHHHHHHHHHh-hCCeEEEECCCC---CCCCCC---CCC---CCHHHHHHHHHHHHHH--
Confidence 44567889999996555 345666777774 579999999999 554431 111 2334433333333333
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc-hhh-----hhc----c--CCCCCCcee-e----eccCCCC
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NLA-----LMV----G--TTDIPDWCY-V----ESYGSKG 619 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~-~~~-----~~~----~--~~~~~~~~~-~----~~~~~~~ 619 (715)
...+++.|+||||||.+++.++.++|++++++|++++.. ... ... . ......... . ..+....
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEG 157 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHH
Confidence 234679999999999999999999999999999875321 100 000 0 000000000 0 0000000
Q ss_pred -----CCCCCCCC----ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCC
Q 005093 620 -----KDSFTESP----SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 690 (715)
Q Consensus 620 -----~~~~~~~~----~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 690 (715)
...+.... .......+........+..+++|+|+++|++|..++.+....+.+.+ ..+++++++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~g 233 (255)
T PRK10673 158 VIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAG 233 (255)
T ss_pred HHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCC
Confidence 00000000 00000111111112235567899999999999999876655554443 357888999999
Q ss_pred ccCCCCCchHHHHHHHHHHHHH
Q 005093 691 HGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 691 H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
|.... +....+.+.+.+||.+
T Consensus 234 H~~~~-~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 234 HWVHA-EKPDAVLRAIRRYLND 254 (255)
T ss_pred Ceeec-cCHHHHHHHHHHHHhc
Confidence 97654 4455788999999875
No 73
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.67 E-value=2.2e-15 Score=157.33 Aligned_cols=219 Identities=17% Similarity=0.252 Sum_probs=130.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|++ +|.|+++|+|| ||.+.. +.. .....++..+.+..+++. ...+
T Consensus 88 gp~lvllHG~~~~--~~~w~~~~~~L~~-~~~via~Dl~G---~G~S~~---~~~-~~~~~~~~a~~l~~~l~~--l~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGAS--IPHWRRNIGVLAK-NYTVYAIDLLG---FGASDK---PPG-FSYTMETWAELILDFLEE--VVQK 155 (360)
T ss_pred CCeEEEECCCCCC--HHHHHHHHHHHhc-CCEEEEECCCC---CCCCCC---CCC-ccccHHHHHHHHHHHHHH--hcCC
Confidence 4789999996654 5578788888865 79999999999 665432 111 112344555444433333 2347
Q ss_pred eEEEEEeChhHHHHHHHHh-hCCCceeEEEecCCcchhhhhccCCC------CC-Ccee-------------eeccC-CC
Q 005093 561 KVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTD------IP-DWCY-------------VESYG-SK 618 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~~~~~~~~~~~~~~------~~-~~~~-------------~~~~~-~~ 618 (715)
++.|+|||+||.+++.++. .+|++++++|++++............ .+ .+.+ ..... ..
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRD 235 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHH
Confidence 8999999999999988876 46999999999887532110000000 00 0000 00000 00
Q ss_pred CC-----CCCCCCC--Chhh-------------HHHHH---h----cCchhhccCCCCcEEEEeeCCCCcCCchHH-HHH
Q 005093 619 GK-----DSFTESP--SVED-------------LTRFH---S----KSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQY 670 (715)
Q Consensus 619 ~~-----~~~~~~~--~~~~-------------~~~~~---~----~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~-~~~ 670 (715)
.. ..+.... .... ...+. . .+....+.++++|+|+++|++|..+|+... .++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~ 315 (360)
T PLN02679 236 NLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKY 315 (360)
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHH
Confidence 00 0000000 0000 00111 0 112234667899999999999999988743 234
Q ss_pred HHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 671 ARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 671 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
++.+.+.-...++++++++||.... +..+++.+.|.+||++
T Consensus 316 ~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 316 FSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHh
Confidence 4555554456889999999997654 4466889999999976
No 74
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.67 E-value=2.6e-15 Score=158.50 Aligned_cols=236 Identities=14% Similarity=0.137 Sum_probs=139.2
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-HHHHHH---hCCcEEEEEcCCCCCCCchhhhhcCCC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLS---SVGYSLLIVNYRGSLGFGEEALQSLPG 534 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la---~~G~~vi~~d~rG~~~~g~~~~~~~~~ 534 (715)
+..+.+++.....|.+ ....|.||++||.+.. ...|.. .+..|+ +++|.|+++|+|| ||.+... .
T Consensus 182 ~~~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~s--~~~W~~~~~~~L~~~~~~~yrVia~Dl~G---~G~S~~p---~ 250 (481)
T PLN03087 182 SSSNESLFVHVQQPKD---NKAKEDVLFIHGFISS--SAFWTETLFPNFSDAAKSTYRLFAVDLLG---FGRSPKP---A 250 (481)
T ss_pred eeCCeEEEEEEecCCC---CCCCCeEEEECCCCcc--HHHHHHHHHHHHHHHhhCCCEEEEECCCC---CCCCcCC---C
Confidence 3345677777766652 2335789999996654 334543 334444 4799999999999 6655321 1
Q ss_pred CCCccchhhHHHHH-HHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh--------c-cCC
Q 005093 535 KVGSQDVNDVLTAI-DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM--------V-GTT 604 (715)
Q Consensus 535 ~~~~~~~~d~~~~i-~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--------~-~~~ 604 (715)
. ....+++..+.+ ..+.+. .+.+++.++||||||.+++.++.++|++++++|++++....... . ...
T Consensus 251 ~-~~ytl~~~a~~l~~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~ 327 (481)
T PLN03087 251 D-SLYTLREHLEMIERSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVA 327 (481)
T ss_pred C-CcCCHHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhc
Confidence 1 112355555555 244444 24578999999999999999999999999999999864321100 0 000
Q ss_pred CCCCcee----------eeccCCCC----------CCC----CCCCCChhh-HHHH---------------Hhc-----C
Q 005093 605 DIPDWCY----------VESYGSKG----------KDS----FTESPSVED-LTRF---------------HSK-----S 639 (715)
Q Consensus 605 ~~~~~~~----------~~~~~~~~----------~~~----~~~~~~~~~-~~~~---------------~~~-----s 639 (715)
....|.. ........ ... ......... .+.+ ... .
T Consensus 328 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~ 407 (481)
T PLN03087 328 PRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLD 407 (481)
T ss_pred ccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhh
Confidence 0000000 00000000 000 000000000 0000 000 0
Q ss_pred c-h-hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 640 P-I-SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 640 p-~-~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
. + ....++++|+|+++|++|..+|++.+..+.+.+. .+++++++++||.....+....+.+.+.+|++.
T Consensus 408 ~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 408 GYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred hHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 0 0 1123688999999999999999998877766663 478999999999866434456788888888754
No 75
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.67 E-value=5.7e-16 Score=153.95 Aligned_cols=214 Identities=15% Similarity=0.184 Sum_probs=128.6
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|+||++||.+.. ...|...++.| ..||.|+++|+|| +|.+.. . ......++..+.+..+++. .+.
T Consensus 12 ~~~~li~~hg~~~~--~~~~~~~~~~l-~~~~~v~~~d~~G---~G~s~~---~--~~~~~~~~~~~~~~~~i~~--~~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTD--LRMWDPVLPAL-TPDFRVLRYDKRG---HGLSDA---P--EGPYSIEDLADDVLALLDH--LGI 78 (251)
T ss_pred CCCeEEEEcCcccc--hhhHHHHHHHh-hcccEEEEecCCC---CCCCCC---C--CCCCCHHHHHHHHHHHHHH--hCC
Confidence 56899999995544 44566677777 4689999999999 444421 1 1122455666656555554 245
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC----CCCCCceee---e-ccCCCCCCCCCCCCC--h
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT----TDIPDWCYV---E-SYGSKGKDSFTESPS--V 629 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~---~-~~~~~~~~~~~~~~~--~ 629 (715)
+++.++|||+||.+++.+|.++|++++++++.++.......... ......... . .........+..... .
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 78999999999999999999999999999888764321100000 000000000 0 000000000000000 0
Q ss_pred hh----------------HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 630 ED----------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 630 ~~----------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
.. ...+...+....+.++++|+|+++|++|..+|.+....+.+.+. ..+++.+++++|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~ 234 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGHIP 234 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCCcc
Confidence 00 00111122234466788999999999999999887776665553 36788999999977
Q ss_pred CCCCchHHHHHHHHHHHH
Q 005093 694 ERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~ 711 (715)
.... ...+.+.+.+||+
T Consensus 235 ~~~~-p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CVEQ-PEAFNAALRDFLR 251 (251)
T ss_pred cccC-hHHHHHHHHHHhC
Confidence 6543 4567777777763
No 76
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.67 E-value=2.2e-15 Score=152.66 Aligned_cols=215 Identities=15% Similarity=0.134 Sum_probs=130.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|+||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+... . .....+++..+.+..+++.. +.
T Consensus 27 ~~~~vv~~hG~~~~--~~~~~~~~~~l~~-~~~vi~~D~~G---~G~S~~~---~-~~~~~~~~~~~~l~~~i~~~--~~ 94 (278)
T TIGR03056 27 AGPLLLLLHGTGAS--THSWRDLMPPLAR-SFRVVAPDLPG---HGFTRAP---F-RFRFTLPSMAEDLSALCAAE--GL 94 (278)
T ss_pred CCCeEEEEcCCCCC--HHHHHHHHHHHhh-CcEEEeecCCC---CCCCCCc---c-ccCCCHHHHHHHHHHHHHHc--CC
Confidence 35889999996544 4567777777755 69999999999 5544311 1 11234566666666666542 34
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCC---c----eeee------ccCCCCCCCC---
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD---W----CYVE------SYGSKGKDSF--- 623 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~---~----~~~~------~~~~~~~~~~--- 623 (715)
++++|+||||||.+++.++.++|++++++|++++......-......+. . .... .........+
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRD 174 (278)
T ss_pred CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhc
Confidence 6789999999999999999999999999988877543110000000000 0 0000 0000000000
Q ss_pred ----CCCCChh--------------hHHHHHhc--C-chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE
Q 005093 624 ----TESPSVE--------------DLTRFHSK--S-PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 624 ----~~~~~~~--------------~~~~~~~~--s-p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
....... ........ . ....+.++++|+|+++|++|..+|......+.+.+. .++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~ 250 (278)
T TIGR03056 175 TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVP----TAT 250 (278)
T ss_pred cccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCe
Confidence 0000000 00000000 0 122456788999999999999999887776655543 367
Q ss_pred EEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 683 VIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 683 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
+++++++||.+.... ..++.+.|.+|++
T Consensus 251 ~~~~~~~gH~~~~e~-p~~~~~~i~~f~~ 278 (278)
T TIGR03056 251 LHVVPGGGHLVHEEQ-ADGVVGLILQAAE 278 (278)
T ss_pred EEEECCCCCcccccC-HHHHHHHHHHHhC
Confidence 889999999876544 5578888888874
No 77
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.66 E-value=3.6e-16 Score=156.60 Aligned_cols=223 Identities=18% Similarity=0.216 Sum_probs=139.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH--------HHHHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--------SLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~--------~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
||.+|.+.+|+| +....++.|+||..|+.+.......-.. ....|+++||+|+..|.||.++++..+..
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~-- 77 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP-- 77 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T--
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc--
Confidence 689999999999 4447899999999998443210000000 11238999999999999997776655521
Q ss_pred CCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh-hccCC---CC--
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-MVGTT---DI-- 606 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-~~~~~---~~-- 606 (715)
....+.+|..++|+|+.++++ ...||+++|.|++|..++.+|+..|..++|++..++..++.. ..... ..
T Consensus 78 ---~~~~e~~D~~d~I~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~ 153 (272)
T PF02129_consen 78 ---MSPNEAQDGYDTIEWIAAQPW-SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGF 153 (272)
T ss_dssp ---TSHHHHHHHHHHHHHHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCH
T ss_pred ---CChhHHHHHHHHHHHHHhCCC-CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccc
Confidence 155578999999999999975 457999999999999999999988899999999988877653 11000 00
Q ss_pred -CCce---e-eeccCCCC--CC------------------CCCCC-C-------ChhhHHHHHhcCchhhccCCCCcEEE
Q 005093 607 -PDWC---Y-VESYGSKG--KD------------------SFTES-P-------SVEDLTRFHSKSPISHISKVKTPTIF 653 (715)
Q Consensus 607 -~~~~---~-~~~~~~~~--~~------------------~~~~~-~-------~~~~~~~~~~~sp~~~~~~i~~P~Li 653 (715)
..|. . ........ .. ..... + .......+...++...+.++++|+|+
T Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~ 233 (272)
T PF02129_consen 154 FAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLI 233 (272)
T ss_dssp HHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEE
T ss_pred hhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEE
Confidence 0110 0 00000000 00 00000 0 00011223344444567899999999
Q ss_pred EeeCCCCcCCchHHHHHHHHHHHcC-CcEEEEEeCCCCcc
Q 005093 654 LLGAQDLRVPVSNGLQYARALREKG-VETKVIVFPNDVHG 692 (715)
Q Consensus 654 i~G~~D~~v~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~ 692 (715)
+.|..|.... ..+.+.+++++..+ .+.++++-|. +|+
T Consensus 234 v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 234 VGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred ecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 9999997666 88899999999888 6778888775 564
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.66 E-value=1.7e-15 Score=152.80 Aligned_cols=227 Identities=17% Similarity=0.177 Sum_probs=131.1
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
|.+|.|++..|+ ..++.|+||++-|.... ...+.. ...+|+.+|++++++|.+|.+ .+....+..+ .
T Consensus 174 g~~I~g~LhlP~---~~~p~P~VIv~gGlDs~--qeD~~~l~~~~l~~rGiA~LtvDmPG~G---~s~~~~l~~D----~ 241 (411)
T PF06500_consen 174 GKTIPGYLHLPS---GEKPYPTVIVCGGLDSL--QEDLYRLFRDYLAPRGIAMLTVDMPGQG---ESPKWPLTQD----S 241 (411)
T ss_dssp TCEEEEEEEESS---SSS-EEEEEEE--TTS---GGGGHHHHHCCCHHCT-EEEEE--TTSG---GGTTT-S-S-----C
T ss_pred CcEEEEEEEcCC---CCCCCCEEEEeCCcchh--HHHHHHHHHHHHHhCCCEEEEEccCCCc---ccccCCCCcC----H
Confidence 478999999998 67889988887663322 333333 345789999999999999954 3322111111 1
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch-hhhhc-cCCCCCCceeeeccCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LALMV-GTTDIPDWCYVESYGSK 618 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 618 (715)
-.-..++++||.+.+.+|.+||+++|.|+||++|.++|..++++++++|+.+|++. +..-. .....+ ..+...+..
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P-~my~d~LA~- 319 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVP-DMYLDVLAS- 319 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS--HHHHHHHHH-
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCC-HHHHHHHHH-
Confidence 12345789999999999999999999999999999999888899999999888653 21110 001111 111111100
Q ss_pred CCCCCCC-CCChhh-HHHHHhcCchh--hc--cCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCC-c
Q 005093 619 GKDSFTE-SPSVED-LTRFHSKSPIS--HI--SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV-H 691 (715)
Q Consensus 619 ~~~~~~~-~~~~~~-~~~~~~~sp~~--~~--~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~-H 691 (715)
++.. ....+. ...+...|... .+ .+..+|+|.+.|++|+++|.+++..+ ...+.+-+...++... |
T Consensus 320 ---rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~li----a~~s~~gk~~~~~~~~~~ 392 (411)
T PF06500_consen 320 ---RLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLI----AESSTDGKALRIPSKPLH 392 (411)
T ss_dssp ---HCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHH----HHTBTT-EEEEE-SSSHH
T ss_pred ---HhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHH----HhcCCCCceeecCCCccc
Confidence 0000 011111 12233444422 23 56678999999999999998876544 3334445566666544 5
Q ss_pred cCCCCCchHHHHHHHHHHHHHhc
Q 005093 692 GIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
.-. ...+..+.+||++.|
T Consensus 393 ~gy-----~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 393 MGY-----PQALDEIYKWLEDKL 410 (411)
T ss_dssp HHH-----HHHHHHHHHHHHHHH
T ss_pred cch-----HHHHHHHHHHHHHhc
Confidence 432 467889999999865
No 79
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.65 E-value=3.7e-15 Score=143.81 Aligned_cols=191 Identities=19% Similarity=0.231 Sum_probs=114.1
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHH-HHHhCCcEEEEEcCCC---CCCCch---hhhhcCCCCCCc-cchhhH----
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLA-FLSSVGYSLLIVNYRG---SLGFGE---EALQSLPGKVGS-QDVNDV---- 544 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~-~la~~G~~vi~~d~rG---~~~~g~---~~~~~~~~~~~~-~~~~d~---- 544 (715)
..+..|+||++||.+... ..+..... .+......++.++-+. ....|. .|.......... .+.+++
T Consensus 10 ~~~~~~lvi~LHG~G~~~--~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSE--DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--TTS-H--HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCceEEEEECCCCCCc--chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 456789999999955442 22222222 2234567777776431 111222 343221111111 122222
Q ss_pred ---HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCC
Q 005093 545 ---LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 621 (715)
Q Consensus 545 ---~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (715)
.+.|+...+.+ ++.+||++.|+|.||.+++.++.++|..+.++|++++.......
T Consensus 88 ~~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------------------- 145 (216)
T PF02230_consen 88 ERLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------------------- 145 (216)
T ss_dssp HHHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---------------------
T ss_pred HHHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---------------------
Confidence 23333333333 89999999999999999999999999999999999986521100
Q ss_pred CCCCCCChhhHHHHHhcCchhhccC-CCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchH
Q 005093 622 SFTESPSVEDLTRFHSKSPISHISK-VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 700 (715)
Q Consensus 622 ~~~~~~~~~~~~~~~~~sp~~~~~~-i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 700 (715)
.. ..... -++|++++||..|+++|.+.++..++.|++.+.++++..|++.||.+. .
T Consensus 146 -------~~-----------~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~-----~ 202 (216)
T PF02230_consen 146 -------LE-----------DRPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS-----P 202 (216)
T ss_dssp -------CH-----------CCHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------H
T ss_pred -------cc-----------ccccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC-----H
Confidence 00 00011 158999999999999999999999999999999999999999999886 4
Q ss_pred HHHHHHHHHHHHhc
Q 005093 701 ESFLNIGLWFKKYC 714 (715)
Q Consensus 701 ~~~~~i~~wl~~~l 714 (715)
+.++.+.+||++++
T Consensus 203 ~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 203 EELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhC
Confidence 67889999999874
No 80
>PRK11071 esterase YqiA; Provisional
Probab=99.64 E-value=8.3e-15 Score=137.35 Aligned_cols=183 Identities=14% Similarity=0.125 Sum_probs=116.8
Q ss_pred cEEEEEcCCCCCCCCccch--HHHHHHHh--CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 482 PLIVVLHGGPHSVSLSSYS--KSLAFLSS--VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~--~~~~~la~--~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
|.||++||.+.+ ...|. .....+++ .+|.|+++|++| ++ ++..+.+..+.++.
T Consensus 2 p~illlHGf~ss--~~~~~~~~~~~~l~~~~~~~~v~~~dl~g---~~----------------~~~~~~l~~l~~~~-- 58 (190)
T PRK11071 2 STLLYLHGFNSS--PRSAKATLLKNWLAQHHPDIEMIVPQLPP---YP----------------ADAAELLESLVLEH-- 58 (190)
T ss_pred CeEEEECCCCCC--cchHHHHHHHHHHHHhCCCCeEEeCCCCC---CH----------------HHHHHHHHHHHHHc--
Confidence 679999995554 33444 23455555 379999999998 42 24455555555552
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh-hccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHH
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 636 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (715)
+.+++.++|+|+||.+++.++.++|. .+|+++|..+... ......... ..+.. ..+. ......+...
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~--~~~~~~~d~~ 126 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPFELLTDYLGENE----NPYTG---QQYV--LESRHIYDLK 126 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHHHHHHHhcCCcc----cccCC---CcEE--EcHHHHHHHH
Confidence 34689999999999999999999883 3577777665321 110000000 00000 0000 0122333333
Q ss_pred hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 637 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 637 ~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
...+.. +. ..+|++++||++|++||++.+.++++. +++++++|++|.+... ++.++.+.+|+.
T Consensus 127 ~~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~~~---~~~~~~i~~fl~ 189 (190)
T PRK11071 127 VMQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFVGF---ERYFNQIVDFLG 189 (190)
T ss_pred hcCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchhhH---HHhHHHHHHHhc
Confidence 333322 33 567899999999999999999998884 3566889999999544 578888999875
No 81
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.64 E-value=1.5e-15 Score=152.22 Aligned_cols=238 Identities=13% Similarity=0.159 Sum_probs=140.2
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC--CCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~--~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
.+|..+.|+++.|.+ . +.+.||++|||.... ....+...++.|+++||.|+++|+|| +|.+... ...+
T Consensus 9 ~~~~~l~g~~~~p~~---~-~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G---~G~S~~~--~~~~- 78 (274)
T TIGR03100 9 CEGETLVGVLHIPGA---S-HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRG---MGDSEGE--NLGF- 78 (274)
T ss_pred cCCcEEEEEEEcCCC---C-CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCC---CCCCCCC--CCCH-
Confidence 357889999999963 2 245677777765332 12234566788999999999999999 5554311 0111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 617 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (715)
....+|+.++++++.+.. ...++|+++|||+||.+++.++.. +.+++++|+++|.............. ..+......
T Consensus 79 ~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~-~~~~~~~~~ 155 (274)
T TIGR03100 79 EGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIR-HYYLGQLLS 155 (274)
T ss_pred HHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHH-HHHHHHHhC
Confidence 123578999999998752 123679999999999999988764 56899999999874311100000000 000000000
Q ss_pred -CCCC-CCCCCCChh-hHHHHHh----c---C-----------chhhccCCCCcEEEEeeCCCCcCCchHH-----HHHH
Q 005093 618 -KGKD-SFTESPSVE-DLTRFHS----K---S-----------PISHISKVKTPTIFLLGAQDLRVPVSNG-----LQYA 671 (715)
Q Consensus 618 -~~~~-~~~~~~~~~-~~~~~~~----~---s-----------p~~~~~~i~~P~Lii~G~~D~~v~~~~~-----~~~~ 671 (715)
.... ...+..... ....+.. . . -...+.++.+|+|+++|..|...+.... ....
T Consensus 156 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~ 235 (274)
T TIGR03100 156 ADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWR 235 (274)
T ss_pred hHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhH
Confidence 0000 000000000 0000000 0 0 0123456789999999999987521100 1111
Q ss_pred HHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 672 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 672 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+.+. ...++++.+++++|.+..+..+.++.+.|.+||++
T Consensus 236 ~~l~--~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 236 GALE--DPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHhh--cCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 2122 14588999999999887777778899999999963
No 82
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.64 E-value=5.5e-15 Score=150.34 Aligned_cols=218 Identities=15% Similarity=0.207 Sum_probs=125.8
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|.||++||++... ...+......+.+.||.|+++|+|| +|.+.... .......++++.+.+..+.+.. +.
T Consensus 24 ~~~~vl~~hG~~g~~-~~~~~~~~~~l~~~g~~vi~~d~~G---~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~ 95 (288)
T TIGR01250 24 EKIKLLLLHGGPGMS-HEYLENLRELLKEEGREVIMYDQLG---CGYSDQPD--DSDELWTIDYFVDELEEVREKL--GL 95 (288)
T ss_pred CCCeEEEEcCCCCcc-HHHHHHHHHHHHhcCCEEEEEcCCC---CCCCCCCC--cccccccHHHHHHHHHHHHHHc--CC
Confidence 357899999976553 2233444455566699999999999 55443110 0100134566666666666652 45
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-----CCCCCCc-e-eeecc------CCC----CCCC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----TTDIPDW-C-YVESY------GSK----GKDS 622 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~-~-~~~~~------~~~----~~~~ 622 (715)
+++.++|||+||.+++.++.++|++++++++.+++........ ....... . ..... ... ....
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEV 175 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHH
Confidence 6799999999999999999999999999998887543211100 0000000 0 00000 000 0000
Q ss_pred C------CCCCChhhHHH------------------------HHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHH
Q 005093 623 F------TESPSVEDLTR------------------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 672 (715)
Q Consensus 623 ~------~~~~~~~~~~~------------------------~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~ 672 (715)
+ ........... +...+....+.++++|+|+++|+.|.. ++..+..+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~ 254 (288)
T TIGR01250 176 FYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQE 254 (288)
T ss_pred HHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHH
Confidence 0 00000000000 001112234567889999999999984 5565555554
Q ss_pred HHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 673 ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 673 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.+. .+++++++++||..... ...++.+.|.+|++
T Consensus 255 ~~~----~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIA----GSRLVVFPDGSHMTMIE-DPEVYFKLLSDFIR 288 (288)
T ss_pred hcc----CCeEEEeCCCCCCcccC-CHHHHHHHHHHHhC
Confidence 443 46788999999987654 45578888888874
No 83
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.63 E-value=4.8e-14 Score=138.61 Aligned_cols=125 Identities=17% Similarity=0.147 Sum_probs=91.9
Q ss_pred CCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCc
Q 005093 248 SEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCF 327 (715)
Q Consensus 248 ~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~ 327 (715)
..+++.+++...-+.+.....|||||+++..-.+ .+||++|++++..+.+......
T Consensus 389 ~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr-----------~el~vididngnv~~idkS~~~------------- 444 (668)
T COG4946 389 KDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDR-----------FELWVIDIDNGNVRLIDKSEYG------------- 444 (668)
T ss_pred cCCceEEEeeCCccceEEEEEcCCCcEEEEEcCc-----------eEEEEEEecCCCeeEecccccc-------------
Confidence 3455556666667778888999999988654433 5799999999888665443322
Q ss_pred cccccCCCCCCccccCCCEEEEEeeeC-CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCC
Q 005093 328 PGLYSSSILSNPWLSDGCTMLLSSIWG-SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVP 402 (715)
Q Consensus 328 ~g~~~~~~~~~~~~~dg~~l~~~~~~~-~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~ 402 (715)
-+..+.|+|+++.+.+....+ -.++|-.+|+++++...++.+.+.-..++|.+|++.|++.+...-.|.
T Consensus 445 ------lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~RsLdPs 514 (668)
T COG4946 445 ------LITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLSARSLDPS 514 (668)
T ss_pred ------eeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEeccccCCC
Confidence 245678999999877766533 245688889999999999887763234799999999999987766665
No 84
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.63 E-value=1.5e-14 Score=150.43 Aligned_cols=262 Identities=17% Similarity=0.182 Sum_probs=165.8
Q ss_pred CCCCceEEEEecCCC-----CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 51 SPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 51 Spdg~~la~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
||||+++++..+..+ ....++..+ ..++.+++....... ..+.|||||++|+|+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~----------~~~~~sP~g~~~~~v~--------- 61 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKL----------QDAKWSPDGKYIAFVR--------- 61 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTB----------SEEEE-SSSTEEEEEE---------
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCcccc----------ccceeecCCCeeEEEe---------
Confidence 899999999765431 223455555 555555554431222 7999999999999973
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC--C--------------C-ccc
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK--S--------------L-SVG 187 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~--------------~-~~~ 187 (715)
.++||+.++.+++.++|| ..+ . + ...
T Consensus 62 ------------------------------------~~nly~~~~~~~~~~~lT-~dg~~~i~nG~~dwvyeEEv~~~~~ 104 (353)
T PF00930_consen 62 ------------------------------------DNNLYLRDLATGQETQLT-TDGEPGIYNGVPDWVYEEEVFDRRS 104 (353)
T ss_dssp ------------------------------------TTEEEEESSTTSEEEESE-S--TTTEEESB--HHHHHHTSSSSB
T ss_pred ------------------------------------cCceEEEECCCCCeEEec-cccceeEEcCccceecccccccccc
Confidence 267999999999999996 211 0 1 234
Q ss_pred eEEEecCCCCCccEEEEEeecCccce-----------------eeeeee----ecCCceEEEEecccccchhhhhhhhcc
Q 005093 188 QVVWAPLNEGLHQYLVFVGWSSETRK-----------------LGIKYC----YNRPCALYAVRVSLYKSEASELELKES 246 (715)
Q Consensus 188 ~~~~spdg~~~~~~i~~~~~~~~~~~-----------------~g~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (715)
.+.|||||++ |+|....+..-+ .-+.+. .+....|+++|+
T Consensus 105 ~~~WSpd~~~----la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~--------------- 165 (353)
T PF00930_consen 105 AVWWSPDSKY----LAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDL--------------- 165 (353)
T ss_dssp SEEE-TTSSE----EEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEES---------------
T ss_pred ceEECCCCCE----EEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEEC---------------
Confidence 6789999999 999865332110 111111 122335777786
Q ss_pred CCCCCCceecC------CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 247 SSEDLPVVNLT------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 247 ~~~~~~~~~lt------~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
++++...+. ........+.|++|+++|++....+. .....|+++|..++..+.+..... +
T Consensus 166 --~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~------q~~~~l~~~d~~tg~~~~~~~e~~---~--- 231 (353)
T PF00930_consen 166 --ASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRD------QNRLDLVLCDASTGETRVVLEETS---D--- 231 (353)
T ss_dssp --SSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETT------STEEEEEEEEECTTTCEEEEEEES---S---
T ss_pred --CCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccC------CCEEEEEEEECCCCceeEEEEecC---C---
Confidence 666654433 23445788999999997777766543 345678888988766543331111 1
Q ss_pred cCCCCCccccccCCCCCCccc-cCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCc-eeEEEeecCCEEEEEEeCC
Q 005093 321 CAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF-SWSLLTLDGDNIIAVSSSP 398 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~-~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~-~~~~~s~~~~~l~~~~~~~ 398 (715)
.|-.....+.|. +++..+++.+...|..+||.++..++..++|+.+...+ ....++.+++.|+|++...
T Consensus 232 ---------~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~ 302 (353)
T PF00930_consen 232 ---------GWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGD 302 (353)
T ss_dssp ---------SSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSG
T ss_pred ---------cceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCC
Confidence 122222333444 78888888888889999999999999999999887655 4457788899999998763
Q ss_pred C-CCCeEEEEeec
Q 005093 399 V-DVPQVKYGYFV 410 (715)
Q Consensus 399 ~-~p~~l~~~~~~ 410 (715)
. .-..||++++.
T Consensus 303 ~p~~r~lY~v~~~ 315 (353)
T PF00930_consen 303 NPGERHLYRVSLD 315 (353)
T ss_dssp GTTSBEEEEEETT
T ss_pred CCCceEEEEEEeC
Confidence 3 33457777776
No 85
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.63 E-value=1.1e-14 Score=144.66 Aligned_cols=213 Identities=15% Similarity=0.216 Sum_probs=126.9
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCCCCCc
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLANPS 560 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~d~~ 560 (715)
|+||++||.+.. ...|......|+ +||.|+++|+|| +|.+.. +......+.+++.+. +..+.+. .+.+
T Consensus 2 ~~vv~~hG~~~~--~~~~~~~~~~L~-~~~~v~~~d~~g---~G~s~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGS--GADWQALIELLG-PHFRCLAIDLPG---HGSSQS---PDEIERYDFEEAAQDILATLLDQ--LGIE 70 (251)
T ss_pred CEEEEEcCCCCc--hhhHHHHHHHhc-ccCeEEEEcCCC---CCCCCC---CCccChhhHHHHHHHHHHHHHHH--cCCC
Confidence 789999996554 456777888887 899999999999 444421 111122335555554 5555554 3467
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC----------------CCCCC----ceeeeccCCCC-
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT----------------TDIPD----WCYVESYGSKG- 619 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~----------------~~~~~----~~~~~~~~~~~- 619 (715)
++.++|||+||.+++.++.++|++++++++.++...+...... ..... +.....+....
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKN 150 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeeccc
Confidence 8999999999999999999999999999998875432210000 00000 00000000000
Q ss_pred CCC---------CCCCCChhhHHHHH------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 620 KDS---------FTESPSVEDLTRFH------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 620 ~~~---------~~~~~~~~~~~~~~------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
... ............+. ..++...+.++++|+|+++|++|..++ . ..+.+.+....++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~----~~~~~~~~~~~~~~~ 225 (251)
T TIGR03695 151 LPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q----IAKEMQKLLPNLTLV 225 (251)
T ss_pred CChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H----HHHHHHhcCCCCcEE
Confidence 000 00000000000110 112223456789999999999998653 2 233455444567899
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.++++||.+.... ...+...|.+||+
T Consensus 226 ~~~~~gH~~~~e~-~~~~~~~i~~~l~ 251 (251)
T TIGR03695 226 IIANAGHNIHLEN-PEAFAKILLAFLE 251 (251)
T ss_pred EEcCCCCCcCccC-hHHHHHHHHHHhC
Confidence 9999999776544 3467778888873
No 86
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.62 E-value=3e-14 Score=150.24 Aligned_cols=222 Identities=17% Similarity=0.259 Sum_probs=125.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc-cchh-hHHHHHHHHHHcCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS-QDVN-DVLTAIDHVIDMGL 556 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~-~~~~-d~~~~i~~l~~~~~ 556 (715)
+..|.||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+.... ..... .... .+.+.+..+.+.
T Consensus 103 ~~~p~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~rG---~G~S~~~~--~~~~~~~~~~~~~~~~i~~~~~~-- 172 (402)
T PLN02894 103 EDAPTLVMVHGYGAS--QGFFFRNFDALAS-RFRVIAIDQLG---WGGSSRPD--FTCKSTEETEAWFIDSFEEWRKA-- 172 (402)
T ss_pred CCCCEEEEECCCCcc--hhHHHHHHHHHHh-CCEEEEECCCC---CCCCCCCC--cccccHHHHHHHHHHHHHHHHHH--
Confidence 456899999996544 3456566677765 59999999999 55442111 01110 1111 223333222222
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC----CC-CCCce---------------------
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT----TD-IPDWC--------------------- 610 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~----~~-~~~~~--------------------- 610 (715)
.+.+++.|+||||||++++.++.++|++++++|+++|..-....... .. ...|.
T Consensus 173 l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 252 (402)
T PLN02894 173 KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGL 252 (402)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhc
Confidence 24568999999999999999999999999999998875311100000 00 00000
Q ss_pred ----------ee-eccCCCCCCCCCCCCChhhH-H-----------------HH-----HhcCch-hhccCCCCcEEEEe
Q 005093 611 ----------YV-ESYGSKGKDSFTESPSVEDL-T-----------------RF-----HSKSPI-SHISKVKTPTIFLL 655 (715)
Q Consensus 611 ----------~~-~~~~~~~~~~~~~~~~~~~~-~-----------------~~-----~~~sp~-~~~~~i~~P~Lii~ 655 (715)
+. ..+................. + .. ....++ ..+.++++|+++++
T Consensus 253 gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~ 332 (402)
T PLN02894 253 GPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIY 332 (402)
T ss_pred cchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEE
Confidence 00 00000000000000000000 0 00 011222 34677899999999
Q ss_pred eCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 656 GAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 656 G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
|++|.+.+ ....++.+.+ +..+++++++++||....+ ....+.+.+.++++.++.
T Consensus 333 G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~~~E-~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 333 GRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFVFLD-NPSGFHSAVLYACRKYLS 387 (402)
T ss_pred eCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCeeecc-CHHHHHHHHHHHHHHhcc
Confidence 99998664 4444443333 3457899999999976544 455788899999888763
No 87
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.61 E-value=3.2e-15 Score=148.04 Aligned_cols=206 Identities=17% Similarity=0.217 Sum_probs=124.2
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
|.||++||.+.. ...|...+..|+ .+|.|+++|+|| +|.+.. .....++++ ++.+.+.. .++
T Consensus 5 ~~iv~~HG~~~~--~~~~~~~~~~l~-~~~~vi~~d~~G---~G~s~~------~~~~~~~~~---~~~~~~~~---~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMN--AEVFRCLDEELS-AHFTLHLVDLPG---HGRSRG------FGPLSLADA---AEAIAAQA---PDP 66 (245)
T ss_pred ceEEEEcCCCCc--hhhHHHHHHhhc-cCeEEEEecCCc---CccCCC------CCCcCHHHH---HHHHHHhC---CCC
Confidence 679999996544 456777777775 569999999999 554321 111234444 34444432 368
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC-CCC-------------Cce-eeec------cCCCCC
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-DIP-------------DWC-YVES------YGSKGK 620 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~-~~~-------------~~~-~~~~------~~~~~~ 620 (715)
+.++|||+||.+++.++.++|++++++|++++...+....... ... .+. .... +.....
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999887653221000000 000 000 0000 000000
Q ss_pred C--------CC--CCCCChhh----HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe
Q 005093 621 D--------SF--TESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 686 (715)
Q Consensus 621 ~--------~~--~~~~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 686 (715)
. .+ ...+.... ...+...+....+.++++|+|+++|++|..+|++....+.+.+. .++++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~ 222 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP----HSELYIF 222 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC----CCeEEEe
Confidence 0 00 00000000 00111122223467899999999999999999887766655543 4788999
Q ss_pred CCCCccCCCCCchHHHHHHHHHHH
Q 005093 687 PNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 687 ~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
+++||..... ...++.+.+.+|+
T Consensus 223 ~~~gH~~~~e-~p~~~~~~i~~fi 245 (245)
T TIGR01738 223 AKAAHAPFLS-HAEAFCALLVAFK 245 (245)
T ss_pred CCCCCCcccc-CHHHHHHHHHhhC
Confidence 9999987654 4557788888774
No 88
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.61 E-value=1.6e-14 Score=146.08 Aligned_cols=213 Identities=15% Similarity=0.217 Sum_probs=124.8
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|. ++|.|+++|+|| +|.+.. +.. .....++..+.+..+++.. +.+
T Consensus 34 ~~~iv~lHG~~~~--~~~~~~~~~~l~-~~~~vi~~D~~G---~G~S~~---~~~-~~~~~~~~~~~~~~~~~~~--~~~ 101 (286)
T PRK03204 34 GPPILLCHGNPTW--SFLYRDIIVALR-DRFRCVAPDYLG---FGLSER---PSG-FGYQIDEHARVIGEFVDHL--GLD 101 (286)
T ss_pred CCEEEEECCCCcc--HHHHHHHHHHHh-CCcEEEEECCCC---CCCCCC---CCc-cccCHHHHHHHHHHHHHHh--CCC
Confidence 4789999996532 446766777775 469999999999 554421 111 1234678888888777763 457
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh---------hhccCCCCCCceee-eccCCCCCC-CCCCCCCh
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWCYV-ESYGSKGKD-SFTESPSV 629 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 629 (715)
++.++||||||.+++.++..+|++++++|++++..... .............. ..+...... ........
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSS 181 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCH
Confidence 89999999999999999999999999999877643110 00000000000000 000000000 00000000
Q ss_pred hhHHHHH-----------------h---cCc-hhh----cc--CCCCcEEEEeeCCCCcCCchH-HHHHHHHHHHcCCcE
Q 005093 630 EDLTRFH-----------------S---KSP-ISH----IS--KVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVET 681 (715)
Q Consensus 630 ~~~~~~~-----------------~---~sp-~~~----~~--~i~~P~Lii~G~~D~~v~~~~-~~~~~~~l~~~g~~~ 681 (715)
.....+. . ..+ +.. +. .+++|+|+++|++|..+++.. ...+.+.+. ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip----~~ 257 (286)
T PRK03204 182 AVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFP----DH 257 (286)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcC----CC
Confidence 0000000 0 000 001 11 127999999999999886553 344444443 47
Q ss_pred EEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 682 KVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 682 ~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
++++++++||....+ ..+++.+.|.+||
T Consensus 258 ~~~~i~~aGH~~~~e-~Pe~~~~~i~~~~ 285 (286)
T PRK03204 258 VLVELPNAKHFIQED-APDRIAAAIIERF 285 (286)
T ss_pred eEEEcCCCccccccc-CHHHHHHHHHHhc
Confidence 888999999987654 4557788888886
No 89
>PLN00021 chlorophyllase
Probab=99.61 E-value=5.6e-14 Score=141.53 Aligned_cols=182 Identities=20% Similarity=0.222 Sum_probs=122.7
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
..++.+.++.|. ..+++|+||++||+... ...|...+..|+++||.|+++|++|..+. .....+
T Consensus 36 ~~~~p~~v~~P~---~~g~~PvVv~lHG~~~~--~~~y~~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 36 SPPKPLLVATPS---EAGTYPVLLFLHGYLLY--NSFYSQLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCCceEEEEeCC---CCCCCCEEEEECCCCCC--cccHHHHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 346778899997 56789999999997654 44677788999999999999998873211 011235
Q ss_pred hhHHHHHHHHHHc--------CCCCCceEEEEEeChhHHHHHHHHhhCCC-----ceeEEEecCCcchhhhhccCCCCCC
Q 005093 542 NDVLTAIDHVIDM--------GLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPD 608 (715)
Q Consensus 542 ~d~~~~i~~l~~~--------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~~~~~~~~~~~~~~ 608 (715)
++..++++|+.+. ..+|.++++|+|||+||.+++.++..+++ ++++++++.|+....... ..
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~-~~---- 174 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK-QT---- 174 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc-CC----
Confidence 6677777777652 23567899999999999999999988764 578889888875421000 00
Q ss_pred ceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCC-----cC----CchH-HHHHHHHHHHcC
Q 005093 609 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-----RV----PVSN-GLQYARALREKG 678 (715)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~-----~v----~~~~-~~~~~~~l~~~g 678 (715)
.+.. ....+ ..-.+..|+|++++..|. .+ |... ..+++++. +
T Consensus 175 -----------------~p~i------l~~~~--~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~---~ 226 (313)
T PLN00021 175 -----------------PPPV------LTYAP--HSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNEC---K 226 (313)
T ss_pred -----------------CCcc------cccCc--ccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhc---C
Confidence 0000 00111 112367999999999763 22 2322 25565554 3
Q ss_pred CcEEEEEeCCCCcc
Q 005093 679 VETKVIVFPNDVHG 692 (715)
Q Consensus 679 ~~~~~~~~~~~~H~ 692 (715)
.+..+.+.++++|.
T Consensus 227 ~~~~~~~~~~~gH~ 240 (313)
T PLN00021 227 APAVHFVAKDYGHM 240 (313)
T ss_pred CCeeeeeecCCCcc
Confidence 47888899999996
No 90
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.60 E-value=9.1e-15 Score=145.96 Aligned_cols=207 Identities=20% Similarity=0.206 Sum_probs=124.5
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
|.||++||.+.+ ...|...+..|.+ .|.|+++|+|| +|.+.. + .....+++.+ .+.+. ..++
T Consensus 14 ~~ivllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~---~---~~~~~~~~~~---~l~~~---~~~~ 75 (256)
T PRK10349 14 VHLVLLHGWGLN--AEVWRCIDEELSS-HFTLHLVDLPG---FGRSRG---F---GALSLADMAE---AVLQQ---APDK 75 (256)
T ss_pred CeEEEECCCCCC--hhHHHHHHHHHhc-CCEEEEecCCC---CCCCCC---C---CCCCHHHHHH---HHHhc---CCCC
Confidence 469999996544 5578888888865 59999999999 555431 1 1123444433 34433 2478
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCC-Cc-------------eeeec------cCCCCC-
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIP-DW-------------CYVES------YGSKGK- 620 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~-~~-------------~~~~~------~~~~~~- 620 (715)
+.++||||||.+++.+|.++|++++++|++++.............. .+ ..... +.....
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 9999999999999999999999999999887642211000000000 00 00000 000000
Q ss_pred -------CCCCC--CCChh----hHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC
Q 005093 621 -------DSFTE--SPSVE----DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 687 (715)
Q Consensus 621 -------~~~~~--~~~~~----~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 687 (715)
..+.. .+... ....+...+....+.++++|+|+++|+.|..+|.+.+..+.+.+ ...++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i----~~~~~~~i~ 231 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSESYIFA 231 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC----CCCeEEEeC
Confidence 00000 00000 00111222333457788999999999999999877665554444 347899999
Q ss_pred CCCccCCCCCchHHHHHHHHHHHH
Q 005093 688 NDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 688 ~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
++||....+ ....+.+.+.+|-.
T Consensus 232 ~~gH~~~~e-~p~~f~~~l~~~~~ 254 (256)
T PRK10349 232 KAAHAPFIS-HPAEFCHLLVALKQ 254 (256)
T ss_pred CCCCCcccc-CHHHHHHHHHHHhc
Confidence 999977654 44577777777643
No 91
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.60 E-value=7.6e-15 Score=136.71 Aligned_cols=201 Identities=18% Similarity=0.165 Sum_probs=135.2
Q ss_pred CCCceEEEEEEecCCCCCCCCC-cEEEEEcCCCCCCCCccchHH-------HHHHHhCCcEEEEEcCCCCCCCchhhhhc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCD-PLIVVLHGGPHSVSLSSYSKS-------LAFLSSVGYSLLIVNYRGSLGFGEEALQS 531 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~-P~vv~iHGg~~~~~~~~~~~~-------~~~la~~G~~vi~~d~rG~~~~g~~~~~~ 531 (715)
..|.++...+|.|+++.+.+++ |+|||+||++.... ...... +-..-+.++-|++|.|--. +..+
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~-dn~~~l~sg~gaiawa~pedqcfVlAPQy~~i--f~d~---- 241 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGS-DNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPI--FADS---- 241 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCc-hhhhhhhcCccceeeecccCceEEEccccccc--cccc----
Confidence 3678899999999999999998 99999999765432 121111 1122344566777764321 1100
Q ss_pred CCCCCCccchhhHHHHHH-HHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCce
Q 005093 532 LPGKVGSQDVNDVLTAID-HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC 610 (715)
Q Consensus 532 ~~~~~~~~~~~d~~~~i~-~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 610 (715)
.+..........++++ -|.+++.+|.+||+++|.|+||+.++.++.++|+.|++++++++--+-
T Consensus 242 --e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------- 306 (387)
T COG4099 242 --EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------- 306 (387)
T ss_pred --ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch-------------
Confidence 0111112345556665 667788899999999999999999999999999999999998874220
Q ss_pred eeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccC-CCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC-
Q 005093 611 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISK-VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN- 688 (715)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~- 688 (715)
...+.. -+.|+.+.|+.+|+++|.+.++-.++.++..+.++++..|..
T Consensus 307 ------------------------------v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g 356 (387)
T COG4099 307 ------------------------------VYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEG 356 (387)
T ss_pred ------------------------------hhhhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhc
Confidence 001111 237999999999999999999999999998888887776652
Q ss_pred --CCccCCCCCchHHH--HHHHHHHHHH
Q 005093 689 --DVHGIERPQSDFES--FLNIGLWFKK 712 (715)
Q Consensus 689 --~~H~~~~~~~~~~~--~~~i~~wl~~ 712 (715)
..|+......+... ..++.+||-+
T Consensus 357 ~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 357 TTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred cccccccCCCCcceeecCCHHHHHHHHh
Confidence 22333322222111 2357777643
No 92
>PRK06489 hypothetical protein; Provisional
Probab=99.60 E-value=1.6e-14 Score=151.14 Aligned_cols=221 Identities=20% Similarity=0.257 Sum_probs=126.0
Q ss_pred CcEEEEEcCCCCCCCCccch--HHHHHH-------HhCCcEEEEEcCCCCCCCchhhhhcCC--CCCCccchhhHHHHH-
Q 005093 481 DPLIVVLHGGPHSVSLSSYS--KSLAFL-------SSVGYSLLIVNYRGSLGFGEEALQSLP--GKVGSQDVNDVLTAI- 548 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~--~~~~~l-------a~~G~~vi~~d~rG~~~~g~~~~~~~~--~~~~~~~~~d~~~~i- 548 (715)
.|.||++||++.+. ..|. .....| ..++|.|+++|+|| ||.+...... .......++++.+.+
T Consensus 69 gpplvllHG~~~~~--~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~G---hG~S~~p~~~~~~~~~~~~~~~~a~~~~ 143 (360)
T PRK06489 69 DNAVLVLHGTGGSG--KSFLSPTFAGELFGPGQPLDASKYFIILPDGIG---HGKSSKPSDGLRAAFPRYDYDDMVEAQY 143 (360)
T ss_pred CCeEEEeCCCCCch--hhhccchhHHHhcCCCCcccccCCEEEEeCCCC---CCCCCCCCcCCCCCCCcccHHHHHHHHH
Confidence 57899999976542 2232 222222 25789999999999 5554311000 001123456666443
Q ss_pred HHHHHcCCCCCceEE-EEEeChhHHHHHHHHhhCCCceeEEEecCCcchh--------hhh-c-cCCCCCCc---eee--
Q 005093 549 DHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL--------ALM-V-GTTDIPDW---CYV-- 612 (715)
Q Consensus 549 ~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~--------~~~-~-~~~~~~~~---~~~-- 612 (715)
..+.+.- +.+++. |+||||||++++.++.++|++++++|++++.... ... . .......+ .+.
T Consensus 144 ~~l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PRK06489 144 RLVTEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQ 221 (360)
T ss_pred HHHHHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 3344442 345674 8999999999999999999999999988764210 000 0 00000000 000
Q ss_pred e--------cc---CCCC-CCCCCCCCChh----h------------HHHH-------HhcCchhhccCCCCcEEEEeeC
Q 005093 613 E--------SY---GSKG-KDSFTESPSVE----D------------LTRF-------HSKSPISHISKVKTPTIFLLGA 657 (715)
Q Consensus 613 ~--------~~---~~~~-~~~~~~~~~~~----~------------~~~~-------~~~sp~~~~~~i~~P~Lii~G~ 657 (715)
. .+ .... .......+... . ...+ ...+....+.++++|+|+++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~ 301 (360)
T PRK06489 222 PPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSA 301 (360)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecC
Confidence 0 00 0000 00000000000 0 0000 1122334567899999999999
Q ss_pred CCCcCCchHH--HHHHHHHHHcCCcEEEEEeCCC----CccCCCCCchHHHHHHHHHHHHHhc
Q 005093 658 QDLRVPVSNG--LQYARALREKGVETKVIVFPND----VHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 658 ~D~~v~~~~~--~~~~~~l~~~g~~~~~~~~~~~----~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+|..+|++.+ +.+.+.+. ..++++++++ ||... +....+.+.|.+||+..-
T Consensus 302 ~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 302 DDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred CCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 9999998765 45555543 4789999996 99875 466688889999998754
No 93
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.59 E-value=4.1e-14 Score=124.18 Aligned_cols=189 Identities=18% Similarity=0.246 Sum_probs=130.6
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCC---CCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS---VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~---~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
-.+.+. +.|. .....|+.|.+|.-+.. +........+..|.++||.|+.+||||.+.+...| +.+..
T Consensus 14 G~le~~-~~~~---~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f------D~GiG 83 (210)
T COG2945 14 GRLEGR-YEPA---KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF------DNGIG 83 (210)
T ss_pred ccceec-cCCC---CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc------cCCcc
Confidence 345544 3444 35678999999984432 22223344667789999999999999987766655 45556
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCC
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 619 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (715)
+.+|+.++++|+.++. -+..-..+.|+|+|+++++.+|.+.|+ ....++.+|.++..
T Consensus 84 E~~Da~aaldW~~~~h-p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~--------------------- 140 (210)
T COG2945 84 ELEDAAAALDWLQARH-PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY--------------------- 140 (210)
T ss_pred hHHHHHHHHHHHHhhC-CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch---------------------
Confidence 7999999999999985 222334789999999999999998765 44455555544310
Q ss_pred CCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch
Q 005093 620 KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD 699 (715)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 699 (715)
. ...+....+|.++++|+.|.++.+....+..+. .+.+++++++++|.|... .
T Consensus 141 --------------d------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~~a~HFF~gK--l 193 (210)
T COG2945 141 --------------D------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-----IKITVITIPGADHFFHGK--L 193 (210)
T ss_pred --------------h------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-----CCCceEEecCCCceeccc--H
Confidence 0 011223457899999999988876655444333 567889999999977532 3
Q ss_pred HHHHHHHHHHHH
Q 005093 700 FESFLNIGLWFK 711 (715)
Q Consensus 700 ~~~~~~i~~wl~ 711 (715)
..+.+.+.+|+.
T Consensus 194 ~~l~~~i~~~l~ 205 (210)
T COG2945 194 IELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHHhh
Confidence 456777888883
No 94
>PRK07581 hypothetical protein; Validated
Probab=99.58 E-value=1.7e-14 Score=150.15 Aligned_cols=223 Identities=14% Similarity=0.076 Sum_probs=126.5
Q ss_pred CCcEEEEEcCCCCCCCCccchHHH---HHHHhCCcEEEEEcCCCCCCCchhhhhcCC-CCCC-----ccc-hhhHHHHHH
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSL---AFLSSVGYSLLIVNYRGSLGFGEEALQSLP-GKVG-----SQD-VNDVLTAID 549 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~---~~la~~G~~vi~~d~rG~~~~g~~~~~~~~-~~~~-----~~~-~~d~~~~i~ 549 (715)
+.|+||++||+++... .+...+ ..|...+|.|+++|+|| +|.+...... ..+. ... .+|+.+...
T Consensus 40 ~~~~vll~~~~~~~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (339)
T PRK07581 40 KDNAILYPTWYSGTHQ--DNEWLIGPGRALDPEKYFIIIPNMFG---NGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHR 114 (339)
T ss_pred CCCEEEEeCCCCCCcc--cchhhccCCCccCcCceEEEEecCCC---CCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHH
Confidence 4577888787554422 232222 35666789999999999 5554311100 0111 111 244444344
Q ss_pred HHHHcCCCCCce-EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh------------hccCCCCC-Cce-----
Q 005093 550 HVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL------------MVGTTDIP-DWC----- 610 (715)
Q Consensus 550 ~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~------------~~~~~~~~-~~~----- 610 (715)
.+.+.- ..++ +.|+||||||++++.+|.++|++++++|++++...... +....... .+.
T Consensus 115 ~l~~~l--gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 192 (339)
T PRK07581 115 LLTEKF--GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPE 192 (339)
T ss_pred HHHHHh--CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHH
Confidence 455432 3467 47899999999999999999999999998865432100 00000000 000
Q ss_pred --------------eeecc-CCCCCCC----------------CCCCCChhhHHH----HHh----------cCchhhcc
Q 005093 611 --------------YVESY-GSKGKDS----------------FTESPSVEDLTR----FHS----------KSPISHIS 645 (715)
Q Consensus 611 --------------~~~~~-~~~~~~~----------------~~~~~~~~~~~~----~~~----------~sp~~~~~ 645 (715)
+...+ ....... ............ +.. .+....+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~ 272 (339)
T PRK07581 193 RGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALG 272 (339)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHh
Confidence 00000 0000000 000000000000 000 01223466
Q ss_pred CCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC-CCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 646 KVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 646 ~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
++++|+|+++|++|..+|+..+..+.+.+. ..+++++++ +||.....+. .++...|.+|+++++
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip----~a~l~~i~~~~GH~~~~~~~-~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALIP----NAELRPIESIWGHLAGFGQN-PADIAFIDAALKELL 337 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEeCCCCCccccccCc-HHHHHHHHHHHHHHH
Confidence 789999999999999999888777766653 368889998 8997665444 477888999999876
No 95
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.58 E-value=4.3e-14 Score=147.37 Aligned_cols=236 Identities=13% Similarity=0.169 Sum_probs=139.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCC---CCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPH---SVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~---~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
+..+.|.|... ...+.| ||++||-.. ......+...+..|+++||.|+++|++| +|.+.. .........
T Consensus 48 ~~l~~~~~~~~-~~~~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g---~g~s~~---~~~~~d~~~ 119 (350)
T TIGR01836 48 VVLYRYTPVKD-NTHKTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGY---PDRADR---YLTLDDYIN 119 (350)
T ss_pred EEEEEecCCCC-cCCCCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCC---CCHHHh---cCCHHHHHH
Confidence 33445666421 122334 888998321 1112234568889999999999999998 443221 111111112
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC-----------------
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------------- 604 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~----------------- 604 (715)
.++.++++++.++. ..+++.++|||+||.+++.++..+|++++++|++++.+++.......
T Consensus 120 ~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (350)
T TIGR01836 120 GYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMG 197 (350)
T ss_pred HHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcC
Confidence 45778899988873 45789999999999999999999999999999999887643211000
Q ss_pred CCCCceee------ec-------c-------CCC-CCCC-------CCCCCC--hhhH----HHHHhcCc----------
Q 005093 605 DIPDWCYV------ES-------Y-------GSK-GKDS-------FTESPS--VEDL----TRFHSKSP---------- 640 (715)
Q Consensus 605 ~~~~~~~~------~~-------~-------~~~-~~~~-------~~~~~~--~~~~----~~~~~~sp---------- 640 (715)
.++.+... .. + ... .... +...+. .... +.+...+.
T Consensus 198 ~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~ 277 (350)
T TIGR01836 198 NIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGG 277 (350)
T ss_pred CCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECC
Confidence 00000000 00 0 000 0000 000000 0000 00000111
Q ss_pred -hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc-CC-CCCchHHHHHHHHHHHHHh
Q 005093 641 -ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG-IE-RPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 641 -~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~-~~-~~~~~~~~~~~i~~wl~~~ 713 (715)
...+.++++|+|+++|++|.++|+..+..+++.+.. .+++++++++ ||. +. ......+++..+.+||.++
T Consensus 278 ~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 278 RKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred EEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHhC
Confidence 012456789999999999999999988888777643 4567888875 564 33 3334578999999999763
No 96
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.58 E-value=3.7e-14 Score=148.00 Aligned_cols=245 Identities=15% Similarity=0.176 Sum_probs=138.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc---------cchHHH---HHHHhCCcEEEEEcCCCC--CCCch
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS---------SYSKSL---AFLSSVGYSLLIVNYRGS--LGFGE 526 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~---------~~~~~~---~~la~~G~~vi~~d~rG~--~~~g~ 526 (715)
+|.+++...+-+.+ ....|.||++||.+.+.... .|...+ ..|...+|.|+++|+||. +..+.
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 45566655554421 12347899999955432111 233333 255578999999999992 22121
Q ss_pred hhhhcC----CCCCCccchhhHHHHHHHHHHcCCCCCce-EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-
Q 005093 527 EALQSL----PGKVGSQDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM- 600 (715)
Q Consensus 527 ~~~~~~----~~~~~~~~~~d~~~~i~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~- 600 (715)
+..... ..+.....++|+.+.+..+++.- ..++ +.|+||||||.+++.++.++|++++++|++++.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWC 168 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHH
Confidence 110000 00111345677777776666653 3467 999999999999999999999999999998876431100
Q ss_pred -----------ccCCC-----C-----CCcee--ee-----ccCC-C-CCCCCCCC------C--------ChhhH----
Q 005093 601 -----------VGTTD-----I-----PDWCY--VE-----SYGS-K-GKDSFTES------P--------SVEDL---- 632 (715)
Q Consensus 601 -----------~~~~~-----~-----~~~~~--~~-----~~~~-~-~~~~~~~~------~--------~~~~~---- 632 (715)
..... . +.+.+ .. .+.. . ....+... + .....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
T TIGR01392 169 IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQ 248 (351)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHH
Confidence 00000 0 00000 00 0000 0 00000000 0 00000
Q ss_pred -----------------HHHHhcCc-------hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEE-eC
Q 005093 633 -----------------TRFHSKSP-------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV-FP 687 (715)
Q Consensus 633 -----------------~~~~~~sp-------~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~-~~ 687 (715)
..+...+. ...+.++++|+|+++|++|..+|+..++.+.+.+......++++. ++
T Consensus 249 ~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~ 328 (351)
T TIGR01392 249 GDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIES 328 (351)
T ss_pred HHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCC
Confidence 00111111 235668899999999999999999999999998876544444444 46
Q ss_pred CCCccCCCCCchHHHHHHHHHHHH
Q 005093 688 NDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 688 ~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
++||.....+ ..++.+.+.+||+
T Consensus 329 ~~GH~~~le~-p~~~~~~l~~FL~ 351 (351)
T TIGR01392 329 PYGHDAFLVE-TDQVEELIRGFLR 351 (351)
T ss_pred CCCcchhhcC-HHHHHHHHHHHhC
Confidence 8999776543 4577788888864
No 97
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.58 E-value=1.1e-13 Score=141.79 Aligned_cols=215 Identities=19% Similarity=0.256 Sum_probs=127.0
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.+.||++||++.... .......+...+|.|+++|+|| +|.+... ........+++.+.+..+.+.. +.+
T Consensus 27 ~~~lvllHG~~~~~~---~~~~~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~~~~~~~dl~~l~~~l--~~~ 95 (306)
T TIGR01249 27 GKPVVFLHGGPGSGT---DPGCRRFFDPETYRIVLFDQRG---CGKSTPH---ACLEENTTWDLVADIEKLREKL--GIK 95 (306)
T ss_pred CCEEEEECCCCCCCC---CHHHHhccCccCCEEEEECCCC---CCCCCCC---CCcccCCHHHHHHHHHHHHHHc--CCC
Confidence 456899999765532 1233344556789999999999 6655321 1111223566777777666653 446
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh------------h--------ccCCCCC-Cc-eee----ec
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL------------M--------VGTTDIP-DW-CYV----ES 614 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~------------~--------~~~~~~~-~~-~~~----~~ 614 (715)
++.++||||||.+++.++.++|++++++|+.++...... . ....... .. .+. ..
T Consensus 96 ~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (306)
T TIGR01249 96 NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDR 175 (306)
T ss_pred CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHH
Confidence 899999999999999999999999999998876432100 0 0000000 00 000 00
Q ss_pred cCCCC--------------C-CCCCCCC--------ChhhHHHHHh----------cC-----chhhccCC-CCcEEEEe
Q 005093 615 YGSKG--------------K-DSFTESP--------SVEDLTRFHS----------KS-----PISHISKV-KTPTIFLL 655 (715)
Q Consensus 615 ~~~~~--------------~-~~~~~~~--------~~~~~~~~~~----------~s-----p~~~~~~i-~~P~Lii~ 655 (715)
+.... . ....... .......+.. .. -...+.++ ++|+|++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~ 255 (306)
T TIGR01249 176 LQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVH 255 (306)
T ss_pred ccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEe
Confidence 00000 0 0000000 0000000000 00 11234566 58999999
Q ss_pred eCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 656 GAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 656 G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
|+.|..+|+..+..+++.+. ..++++++++||....+ ...+.+.+|+..+|
T Consensus 256 g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~----~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 256 GRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSAFDP----NNLAALVHALETYL 306 (306)
T ss_pred cCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCCCCh----HHHHHHHHHHHHhC
Confidence 99999999988888777653 37788999999987533 45678888888765
No 98
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.58 E-value=1.6e-15 Score=148.09 Aligned_cols=197 Identities=20% Similarity=0.298 Sum_probs=119.8
Q ss_pred EEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEE
Q 005093 484 IVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVT 563 (715)
Q Consensus 484 vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~ 563 (715)
||++||.+.. ...|...+..| ++||.|+++|+|| +|.+.... .......++..+.+..+++.. ..+++.
T Consensus 1 vv~~hG~~~~--~~~~~~~~~~l-~~~~~v~~~d~~G---~G~s~~~~---~~~~~~~~~~~~~l~~~l~~~--~~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGS--SESWDPLAEAL-ARGYRVIAFDLPG---HGRSDPPP---DYSPYSIEDYAEDLAELLDAL--GIKKVI 69 (228)
T ss_dssp EEEE-STTTT--GGGGHHHHHHH-HTTSEEEEEECTT---STTSSSHS---SGSGGSHHHHHHHHHHHHHHT--TTSSEE
T ss_pred eEEECCCCCC--HHHHHHHHHHH-hCCCEEEEEecCC---cccccccc---ccCCcchhhhhhhhhhccccc--cccccc
Confidence 7999997655 46788888888 5899999999999 55443211 112234555555555555552 337899
Q ss_pred EEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc----C---CCCCCce--eeeccCCCCCCCCCCCCCh-----
Q 005093 564 VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG----T---TDIPDWC--YVESYGSKGKDSFTESPSV----- 629 (715)
Q Consensus 564 l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~----~---~~~~~~~--~~~~~~~~~~~~~~~~~~~----- 629 (715)
++|||+||.+++.++.++|++++++|+++|......... . .....+. ....+..............
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999875321110 0 0000000 0000000000000000000
Q ss_pred ---hhHHH-----HHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 630 ---EDLTR-----FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 630 ---~~~~~-----~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
..... ....+....+.++++|+++++|++|..++.+....+.+.+ ..+++++++++||.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEETTSSSTHHH
T ss_pred ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCccHH
Confidence 00000 1122333566788999999999999999855554444433 46899999999998653
No 99
>PLN02872 triacylglycerol lipase
Probab=99.57 E-value=1.1e-14 Score=151.12 Aligned_cols=249 Identities=18% Similarity=0.198 Sum_probs=144.8
Q ss_pred CCCCceEEEEEEecCCC-CCCCCCcEEEEEcCCCCCCCCcc----chHHHHHHHhCCcEEEEEcCCCCCC-CchhhhhcC
Q 005093 459 KGAQKPFEAIFVSSSHK-KDCSCDPLIVVLHGGPHSVSLSS----YSKSLAFLSSVGYSLLIVNYRGSLG-FGEEALQSL 532 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~-~~~~~~P~vv~iHGg~~~~~~~~----~~~~~~~la~~G~~vi~~d~rG~~~-~g~~~~~~~ 532 (715)
..||..|...-+.+... ....+.|+|+++||......... ....+..|+++||.|+++|.||.+. +|.......
T Consensus 51 T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~ 130 (395)
T PLN02872 51 TKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEK 130 (395)
T ss_pred CCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCcc
Confidence 34666665545433221 12234688999999654432211 1234556889999999999999542 222211111
Q ss_pred CC-----CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcchhhh-----
Q 005093 533 PG-----KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLAL----- 599 (715)
Q Consensus 533 ~~-----~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~~~~~----- 599 (715)
.. .+......|+.++++++.+.. .+++.++|||+||.+++.++ .+|+ +++++++++|+..+..
T Consensus 131 ~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~ 206 (395)
T PLN02872 131 DKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPL 206 (395)
T ss_pred chhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHH
Confidence 11 111222469999999998653 47899999999999998555 4676 5777777777643210
Q ss_pred -----------h---ccCCCC-CC-c--e-eee---------------ccCCCC--------------------------
Q 005093 600 -----------M---VGTTDI-PD-W--C-YVE---------------SYGSKG-------------------------- 619 (715)
Q Consensus 600 -----------~---~~~~~~-~~-~--~-~~~---------------~~~~~~-------------------------- 619 (715)
+ .+.... +. . . ... ..+...
T Consensus 207 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~ 286 (395)
T PLN02872 207 VLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHL 286 (395)
T ss_pred HHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHH
Confidence 0 000000 00 0 0 000 000000
Q ss_pred -----CCCCCCCC--ChhhHHHHHhcC-chhhccCC--CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCC
Q 005093 620 -----KDSFTESP--SVEDLTRFHSKS-PISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 689 (715)
Q Consensus 620 -----~~~~~~~~--~~~~~~~~~~~s-p~~~~~~i--~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~ 689 (715)
...+.... ...+...|-... |...+.++ ++|+++++|++|..+++.....+.+.+.. ..+++.+++.
T Consensus 287 ~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~ 363 (395)
T PLN02872 287 FQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENY 363 (395)
T ss_pred HHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCC
Confidence 00000000 011222222223 33456777 47999999999999998888777777643 2577889999
Q ss_pred Ccc--CCCCCchHHHHHHHHHHHHHhc
Q 005093 690 VHG--IERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 690 ~H~--~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+|. +...+..+.+++.|++|+++++
T Consensus 364 gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 364 GHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 997 4456667789999999999875
No 100
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.57 E-value=3.9e-14 Score=149.91 Aligned_cols=213 Identities=16% Similarity=0.230 Sum_probs=128.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
++.|.||++||.+.. ...|......|.+ +|.|+++|+|| +|.+.. ........++.+.+..+.+. ++
T Consensus 129 ~~~~~vl~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~d~~g---~G~s~~-----~~~~~~~~~~~~~~~~~~~~--~~ 195 (371)
T PRK14875 129 GDGTPVVLIHGFGGD--LNNWLFNHAALAA-GRPVIALDLPG---HGASSK-----AVGAGSLDELAAAVLAFLDA--LG 195 (371)
T ss_pred CCCCeEEEECCCCCc--cchHHHHHHHHhc-CCEEEEEcCCC---CCCCCC-----CCCCCCHHHHHHHHHHHHHh--cC
Confidence 346789999995544 4566667777755 59999999999 444321 11123466777777666665 45
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh--------ccCCCCCCce--eeeccCCC-CCC------
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM--------VGTTDIPDWC--YVESYGSK-GKD------ 621 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~-~~~------ 621 (715)
..+++++|||+||.+++.++.++|++++++++++|....... .......... ....+... ...
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVED 275 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHH
Confidence 678999999999999999999999999999998875321100 0000000000 00000000 000
Q ss_pred --CCCCCCC-hhhHHHHH---------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCC
Q 005093 622 --SFTESPS-VEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 689 (715)
Q Consensus 622 --~~~~~~~-~~~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~ 689 (715)
.+..... ......+. ..+....+.++++|+|+++|++|..+|...+..+. ..+++.+++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~-------~~~~~~~~~~~ 348 (371)
T PRK14875 276 LLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP-------DGVAVHVLPGA 348 (371)
T ss_pred HHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc-------CCCeEEEeCCC
Confidence 0000000 00000000 01122345678999999999999999877654332 24678899999
Q ss_pred CccCCCCCchHHHHHHHHHHHHH
Q 005093 690 VHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 690 ~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
||.....+ ...+.+.|.+||++
T Consensus 349 gH~~~~e~-p~~~~~~i~~fl~~ 370 (371)
T PRK14875 349 GHMPQMEA-AADVNRLLAEFLGK 370 (371)
T ss_pred CCChhhhC-HHHHHHHHHHHhcc
Confidence 99766544 45677788888865
No 101
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.57 E-value=5.5e-14 Score=132.29 Aligned_cols=192 Identities=21% Similarity=0.165 Sum_probs=118.6
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCCCchhhhh-cCCCCCCccch
Q 005093 466 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQ-SLPGKVGSQDV 541 (715)
Q Consensus 466 ~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~~g~~~~~-~~~~~~~~~~~ 541 (715)
...+|.|++. +..+.|+||++||..... ..+.. +.+.-.++||+|+.|+-.........|.- ......+..+.
T Consensus 2 ~Y~lYvP~~~-~~~~~PLVv~LHG~~~~a--~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGA-PRGPVPLVVVLHGCGQSA--EDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCC-CCCCCCEEEEeCCCCCCH--HHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccch
Confidence 4568999865 335789999999966542 22222 22334578999999985432111222210 01112233456
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCC
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 621 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (715)
..+.+.|+++..+..+|++||+++|+|.||.++..+++.+|++|+++..+++..-..... .... ...+..
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~---~~~a---~~~m~~---- 148 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAAS---GASA---LSAMRS---- 148 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccC---cccH---HHHhhC----
Confidence 677788999999989999999999999999999999999999999999888764211000 0000 000000
Q ss_pred CCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHH
Q 005093 622 SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE 676 (715)
Q Consensus 622 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~ 676 (715)
...+...........+. ... ..|++++||+.|..|.+..+.++.+++..
T Consensus 149 --g~~~~p~~~~~a~~~~g--~~~--~~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 149 --GPRPAPAAAWGARSDAG--AYP--GYPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred --CCCCChHHHHHhhhhcc--CCC--CCCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 00000010001111110 111 25999999999999999999988888765
No 102
>PLN02578 hydrolase
Probab=99.57 E-value=5.9e-14 Score=146.45 Aligned_cols=208 Identities=19% Similarity=0.195 Sum_probs=121.4
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh----hHHHHHHHHHHcCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN----DVLTAIDHVIDMGL 556 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~----d~~~~i~~l~~~~~ 556 (715)
.|.||++||.+.. ...|...+..|+ ++|.|+++|++|. |.+... ....... ++.+.++.+
T Consensus 86 g~~vvliHG~~~~--~~~w~~~~~~l~-~~~~v~~~D~~G~---G~S~~~-----~~~~~~~~~a~~l~~~i~~~----- 149 (354)
T PLN02578 86 GLPIVLIHGFGAS--AFHWRYNIPELA-KKYKVYALDLLGF---GWSDKA-----LIEYDAMVWRDQVADFVKEV----- 149 (354)
T ss_pred CCeEEEECCCCCC--HHHHHHHHHHHh-cCCEEEEECCCCC---CCCCCc-----ccccCHHHHHHHHHHHHHHh-----
Confidence 3568999995543 456666777775 4699999999994 443211 1112233 333333332
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC--------CCCCceeeecc-------------
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT--------DIPDWCYVESY------------- 615 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~------------- 615 (715)
..+++.++|||+||++++.+|.++|++++++|++++...+....... ..........+
T Consensus 150 -~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (354)
T PLN02578 150 -VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF 228 (354)
T ss_pred -ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH
Confidence 24689999999999999999999999999999887643211000000 00000000000
Q ss_pred -CCCC--------CCCCCC-----------------CCC-hhh-HH---HHH----hcCchhhccCCCCcEEEEeeCCCC
Q 005093 616 -GSKG--------KDSFTE-----------------SPS-VED-LT---RFH----SKSPISHISKVKTPTIFLLGAQDL 660 (715)
Q Consensus 616 -~~~~--------~~~~~~-----------------~~~-~~~-~~---~~~----~~sp~~~~~~i~~P~Lii~G~~D~ 660 (715)
.... ...+.. .+. ... .. .+. ..+....+.++++|+|+++|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~ 308 (354)
T PLN02578 229 WQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDP 308 (354)
T ss_pred HHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCC
Confidence 0000 000000 000 000 00 000 111223467789999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 661 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 661 ~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.+|...+.++.+.+. ..+++++ ++||....+ ...++.+.|.+|++
T Consensus 309 ~v~~~~~~~l~~~~p----~a~l~~i-~~GH~~~~e-~p~~~~~~I~~fl~ 353 (354)
T PLN02578 309 WVGPAKAEKIKAFYP----DTTLVNL-QAGHCPHDE-VPEQVNKALLEWLS 353 (354)
T ss_pred CCCHHHHHHHHHhCC----CCEEEEe-CCCCCcccc-CHHHHHHHHHHHHh
Confidence 999888777666553 3567777 589987644 44578899999985
No 103
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=1.7e-13 Score=132.53 Aligned_cols=221 Identities=17% Similarity=0.232 Sum_probs=131.7
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
...+.+|++||-+.+ ...|...+..|++ ...|.++|++| +|.+.+..++.+.... .....+.|+.-... ..
T Consensus 88 ~~~~plVliHGyGAg--~g~f~~Nf~~La~-~~~vyaiDllG---~G~SSRP~F~~d~~~~-e~~fvesiE~WR~~--~~ 158 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAG--LGLFFRNFDDLAK-IRNVYAIDLLG---FGRSSRPKFSIDPTTA-EKEFVESIEQWRKK--MG 158 (365)
T ss_pred cCCCcEEEEeccchh--HHHHHHhhhhhhh-cCceEEecccC---CCCCCCCCCCCCcccc-hHHHHHHHHHHHHH--cC
Confidence 455568999994332 3456667777777 89999999999 7777665554443322 23444555433333 23
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh----ccCCCCCCce-----------------eeeccCC
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM----VGTTDIPDWC-----------------YVESYGS 617 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~----~~~~~~~~~~-----------------~~~~~~~ 617 (715)
.++..|+|||+||+++..+|.++|++++-+|+++|+--.... ......+.|. .+..++.
T Consensus 159 L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp 238 (365)
T KOG4409|consen 159 LEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGP 238 (365)
T ss_pred CcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccch
Confidence 479999999999999999999999999999999996432211 0001111111 0011111
Q ss_pred CCCC--------CCCCCCChhh-HHHHH----------------------hcCch-hhccCCC--CcEEEEeeCCCCcCC
Q 005093 618 KGKD--------SFTESPSVED-LTRFH----------------------SKSPI-SHISKVK--TPTIFLLGAQDLRVP 663 (715)
Q Consensus 618 ~~~~--------~~~~~~~~~~-~~~~~----------------------~~sp~-~~~~~i~--~P~Lii~G~~D~~v~ 663 (715)
.... .+......+. .+..+ ...|+ +.+..++ +|+++|+|++|.+ .
T Consensus 239 ~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D 317 (365)
T KOG4409|consen 239 KLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-D 317 (365)
T ss_pred HHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-c
Confidence 0000 0000001111 01111 11222 2344455 9999999999965 3
Q ss_pred chHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 664 VSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 664 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
...+.++...+ ....++.+++|++||..... +.+.+.+.++.++++
T Consensus 318 ~~~g~~~~~~~--~~~~~~~~~v~~aGHhvylD-np~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 318 KNAGLEVTKSL--MKEYVEIIIVPGAGHHVYLD-NPEFFNQIVLEECDK 363 (365)
T ss_pred chhHHHHHHHh--hcccceEEEecCCCceeecC-CHHHHHHHHHHHHhc
Confidence 34455555554 33568899999999976644 445778888887765
No 104
>COG0400 Predicted esterase [General function prediction only]
Probab=99.56 E-value=2e-13 Score=127.07 Aligned_cols=188 Identities=16% Similarity=0.171 Sum_probs=128.5
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC-CCCCcc----chhhHHHHHHHH
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-GKVGSQ----DVNDVLTAIDHV 551 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~-~~~~~~----~~~d~~~~i~~l 551 (715)
.....|+||++||.+.. ...+......+ .-.+.++.+.-+-.-..+..|..... ..+... ..+.+.++++.+
T Consensus 14 ~~p~~~~iilLHG~Ggd--e~~~~~~~~~~-~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 14 GDPAAPLLILLHGLGGD--ELDLVPLPELI-LPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCCcEEEEEecCCCC--hhhhhhhhhhc-CCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 45667899999995533 23333333322 33355555543222111222211111 111111 133455666666
Q ss_pred HHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhh
Q 005093 552 IDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED 631 (715)
Q Consensus 552 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (715)
.++..++.+|+.++|+|.|+.+++.+..++|+.++++++.+|..-....
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~------------------------------- 139 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE------------------------------- 139 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------------------------------
Confidence 6777789999999999999999999999999999999999986521100
Q ss_pred HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 632 LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 632 ~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.....-.+|+|++||+.|++||...+.++.+.|+..|.+++...++ .||.+. .+.++.+.+|+.
T Consensus 140 ----------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~-----~e~~~~~~~wl~ 203 (207)
T COG0400 140 ----------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP-----PEELEAARSWLA 203 (207)
T ss_pred ----------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC-----HHHHHHHHHHHH
Confidence 0001124799999999999999999999999999999999999998 799886 466788888998
Q ss_pred Hhc
Q 005093 712 KYC 714 (715)
Q Consensus 712 ~~l 714 (715)
..+
T Consensus 204 ~~~ 206 (207)
T COG0400 204 NTL 206 (207)
T ss_pred hcc
Confidence 764
No 105
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.56 E-value=8.1e-14 Score=137.89 Aligned_cols=206 Identities=17% Similarity=0.181 Sum_probs=120.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.+ ...|...+..| .+|.|+++|+|| +|.+... . ...+++..+.+..+++.. +.+
T Consensus 2 ~p~vvllHG~~~~--~~~w~~~~~~l--~~~~vi~~D~~G---~G~S~~~---~---~~~~~~~~~~l~~~l~~~--~~~ 66 (242)
T PRK11126 2 LPWLVFLHGLLGS--GQDWQPVGEAL--PDYPRLYIDLPG---HGGSAAI---S---VDGFADVSRLLSQTLQSY--NIL 66 (242)
T ss_pred CCEEEEECCCCCC--hHHHHHHHHHc--CCCCEEEecCCC---CCCCCCc---c---ccCHHHHHHHHHHHHHHc--CCC
Confidence 3679999997655 45777788877 379999999999 5554311 1 113555555554444442 357
Q ss_pred eEEEEEeChhHHHHHHHHhhCCC-ceeEEEecCCcchhhhh----ccCCCCCCce----------eeec-cCCCCCCCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALM----VGTTDIPDWC----------YVES-YGSKGKDSFT 624 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~----~~~~~~~~~~----------~~~~-~~~~~~~~~~ 624 (715)
++.++||||||.+++.++.++|+ +++++++.++....... ........|. .... +.......+.
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLN 146 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccC
Confidence 89999999999999999999866 49999987765321100 0000000000 0000 0000000000
Q ss_pred CCC-----------ChhhHHHHH-h------cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe
Q 005093 625 ESP-----------SVEDLTRFH-S------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 686 (715)
Q Consensus 625 ~~~-----------~~~~~~~~~-~------~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 686 (715)
... .......+. . .+....+.++++|+|+++|++|..+. .+.+. ...+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-----~~~~~~~i 216 (242)
T PRK11126 147 AEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-----LALPLHVI 216 (242)
T ss_pred ccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-----hcCeEEEe
Confidence 000 000000010 0 01123466889999999999998541 22221 14789999
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 687 PNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 687 ~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+++||.+.. +..+.+.+.|.+||++
T Consensus 217 ~~~gH~~~~-e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHR-ENPAAFAASLAQILRL 241 (242)
T ss_pred CCCCCchhh-hChHHHHHHHHHHHhh
Confidence 999997664 4456788889999875
No 106
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.55 E-value=6.3e-13 Score=130.04 Aligned_cols=218 Identities=12% Similarity=0.081 Sum_probs=130.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC--CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS--LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~--~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
....+.++++.|. ..++.|+||++||.+.... ...|...+..|+++||.|+++|+|| +|.+........+ .
T Consensus 8 ~~g~~~~~~~~p~---~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G---~G~S~g~~~~~~~-~ 80 (266)
T TIGR03101 8 PHGFRFCLYHPPV---AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYG---CGDSAGDFAAARW-D 80 (266)
T ss_pred CCCcEEEEEecCC---CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCC---CCCCCCccccCCH-H
Confidence 3344667888776 3345799999999554322 2345567788999999999999999 4443211111111 1
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC----------CC-CC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT----------TD-IP 607 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~----------~~-~~ 607 (715)
...+|+.++++++.+.+ ..+|+|+||||||.+++.++.++|++++++|+.+|+.....+... .. ..
T Consensus 81 ~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~ 157 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGES 157 (266)
T ss_pred HHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccc
Confidence 22578888999988763 478999999999999999999999999999999998764322110 00 00
Q ss_pred Cc---eeeeccCCCCCCCCCCCC-ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCC-cCCchHHHHHHHHHHHcCCcEE
Q 005093 608 DW---CYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-RVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 608 ~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~-~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
.. ...+.......-.+.+.. .......+...+....... ..++|++.-..+. .-......++.+++++.|+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~ 236 (266)
T TIGR03101 158 AEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVT 236 (266)
T ss_pred cccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEe
Confidence 00 000000000000011111 1122222222222111111 4567777654322 2223456788899999999999
Q ss_pred EEEeCCC
Q 005093 683 VIVFPND 689 (715)
Q Consensus 683 ~~~~~~~ 689 (715)
...|++.
T Consensus 237 ~~~~~~~ 243 (266)
T TIGR03101 237 VDLVPGP 243 (266)
T ss_pred eeecCCc
Confidence 9999987
No 107
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.55 E-value=3.1e-13 Score=135.30 Aligned_cols=216 Identities=17% Similarity=0.181 Sum_probs=123.7
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
++..|.||++||.+.. ...|......|+++||.|+++|+|| +|.+... + .....+++..+.+..+++.. .
T Consensus 15 ~~~~p~vvliHG~~~~--~~~w~~~~~~L~~~g~~vi~~dl~g---~G~s~~~--~--~~~~~~~~~~~~l~~~i~~l-~ 84 (273)
T PLN02211 15 NRQPPHFVLIHGISGG--SWCWYKIRCLMENSGYKVTCIDLKS---AGIDQSD--A--DSVTTFDEYNKPLIDFLSSL-P 84 (273)
T ss_pred cCCCCeEEEECCCCCC--cCcHHHHHHHHHhCCCEEEEecccC---CCCCCCC--c--ccCCCHHHHHHHHHHHHHhc-C
Confidence 3456899999996655 4578888888988999999999999 5543210 1 11123555554444444432 1
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh---hhcc-CCCCCCce----e-eeccCC--C---C----
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---LMVG-TTDIPDWC----Y-VESYGS--K---G---- 619 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---~~~~-~~~~~~~~----~-~~~~~~--~---~---- 619 (715)
..+++.|+||||||.++..++.++|++++++|++++..... .... ....+.+. . ...+.. . .
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAII 164 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeee
Confidence 24789999999999999999999999999999987643210 0000 00000000 0 000000 0 0
Q ss_pred -----CCC-CCCCCChhhHHHH---Hhc---Cch------hhccCC-CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCc
Q 005093 620 -----KDS-FTESPSVEDLTRF---HSK---SPI------SHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 680 (715)
Q Consensus 620 -----~~~-~~~~~~~~~~~~~---~~~---sp~------~~~~~i-~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~ 680 (715)
... +...+ .+..... ... ..+ ....++ .+|+++|.|++|..+|++..+.+.+.+..
T Consensus 165 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~---- 239 (273)
T PLN02211 165 KKEFRRKILYQMSP-QEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP---- 239 (273)
T ss_pred CHHHHHHHHhcCCC-HHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCc----
Confidence 000 00111 0111100 000 111 112234 68999999999999999888877766532
Q ss_pred EEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 681 TKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 681 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
.+++.++ +||....... .++...|.+..
T Consensus 240 ~~~~~l~-~gH~p~ls~P-~~~~~~i~~~a 267 (273)
T PLN02211 240 SQVYELE-SDHSPFFSTP-FLLFGLLIKAA 267 (273)
T ss_pred cEEEEEC-CCCCccccCH-HHHHHHHHHHH
Confidence 3677886 7997654333 34555555443
No 108
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.55 E-value=1.2e-13 Score=145.35 Aligned_cols=231 Identities=15% Similarity=0.175 Sum_probs=136.3
Q ss_pred CCcEEEEEcCCCCCCCCc-----------cchHHH---HHHHhCCcEEEEEcCCCC-CCC-chhhhhc---CC--CCCCc
Q 005093 480 CDPLIVVLHGGPHSVSLS-----------SYSKSL---AFLSSVGYSLLIVNYRGS-LGF-GEEALQS---LP--GKVGS 538 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~-----------~~~~~~---~~la~~G~~vi~~d~rG~-~~~-g~~~~~~---~~--~~~~~ 538 (715)
..|.||++||.+.+.... .|...+ ..+...+|.|+++|++|. ++. +.+.... .+ .....
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 368999999966543210 133333 134367899999999983 211 1111000 00 01113
Q ss_pred cchhhHHHHHHHHHHcCCCCCce-EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh---------ccCCCCCC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM---------VGTTDIPD 608 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~---------~~~~~~~~ 608 (715)
..++++.+.+..+++.- ..++ +.++||||||.+++.++.++|++++++|++++....... ........
T Consensus 127 ~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~ 204 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPD 204 (379)
T ss_pred CCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCC
Confidence 45777777777666653 3466 589999999999999999999999999998865421100 00000000
Q ss_pred ce-------------------------------eeeccCCCCCCCC---CCC--CChhhH--------------------
Q 005093 609 WC-------------------------------YVESYGSKGKDSF---TES--PSVEDL-------------------- 632 (715)
Q Consensus 609 ~~-------------------------------~~~~~~~~~~~~~---~~~--~~~~~~-------------------- 632 (715)
|. +...+........ ... ......
T Consensus 205 ~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~ 284 (379)
T PRK00175 205 WHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYL 284 (379)
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHH
Confidence 00 0000000000000 000 000000
Q ss_pred -HHHHhcC--------chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC-CCCccCCCCCchHHH
Q 005093 633 -TRFHSKS--------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDVHGIERPQSDFES 702 (715)
Q Consensus 633 -~~~~~~s--------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~ 702 (715)
..+...+ -...+.+|++|+|+++|+.|..+|++.++.+.+.+...+..+++++++ ++||.....+. .++
T Consensus 285 ~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p-~~~ 363 (379)
T PRK00175 285 TRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDD-PRY 363 (379)
T ss_pred HHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCH-HHH
Confidence 0000111 123457889999999999999999999999999998876677888775 89998765444 478
Q ss_pred HHHHHHHHHHh
Q 005093 703 FLNIGLWFKKY 713 (715)
Q Consensus 703 ~~~i~~wl~~~ 713 (715)
.+.+.+||++.
T Consensus 364 ~~~L~~FL~~~ 374 (379)
T PRK00175 364 GRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHhh
Confidence 88999999763
No 109
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.54 E-value=1.2e-13 Score=143.27 Aligned_cols=217 Identities=19% Similarity=0.196 Sum_probs=130.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|.||++||.+.. ...|...+..|+ .+|.|+++|++| +|.+...... ......++++.+.+..+++.- ..
T Consensus 126 ~~~~ivllHG~~~~--~~~w~~~~~~L~-~~~~Via~DlpG---~G~S~~p~~~-~~~~ys~~~~a~~l~~~i~~l--~~ 196 (383)
T PLN03084 126 NNPPVLLIHGFPSQ--AYSYRKVLPVLS-KNYHAIAFDWLG---FGFSDKPQPG-YGFNYTLDEYVSSLESLIDEL--KS 196 (383)
T ss_pred CCCeEEEECCCCCC--HHHHHHHHHHHh-cCCEEEEECCCC---CCCCCCCccc-ccccCCHHHHHHHHHHHHHHh--CC
Confidence 45789999996654 457777888886 489999999999 6654321100 011234666666666655552 34
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh--hcc----CCC--CCCcee----------eeccCCC---
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--MVG----TTD--IPDWCY----------VESYGSK--- 618 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~--~~~----~~~--~~~~~~----------~~~~~~~--- 618 (715)
+++.|+|||+||.+++.++.++|++++++|+++|...... ... ... ...+.. .......
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMK 276 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCC
Confidence 6899999999999999999999999999999998642110 000 000 000000 0000000
Q ss_pred --C----CCCCCCCCC-hhhHH-HHHhc--Cc------hh---hccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCC
Q 005093 619 --G----KDSFTESPS-VEDLT-RFHSK--SP------IS---HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 679 (715)
Q Consensus 619 --~----~~~~~~~~~-~~~~~-~~~~~--sp------~~---~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~ 679 (715)
. ...+..... ..... .+... .. +. ...++++|+|+++|+.|..++.+.+.++.+..
T Consensus 277 ~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~----- 351 (383)
T PLN03084 277 EDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS----- 351 (383)
T ss_pred HHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----
Confidence 0 000000000 00000 00000 00 00 01357899999999999999887766655542
Q ss_pred cEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 680 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 680 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..++++++++||.... +..+++.+.|.+|+.
T Consensus 352 ~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 352 QHKLIELPMAGHHVQE-DCGEELGGIISGILS 382 (383)
T ss_pred CCeEEEECCCCCCcch-hCHHHHHHHHHHHhh
Confidence 4678899999997664 455688888988886
No 110
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.54 E-value=3.3e-13 Score=120.07 Aligned_cols=210 Identities=15% Similarity=0.160 Sum_probs=130.7
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
.+...++|++||.-...........+..+++.||.++.+|++|.++...++. ++++ ...++|+..+++++....
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~---~Gn~-~~eadDL~sV~q~~s~~n-- 103 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY---YGNY-NTEADDLHSVIQYFSNSN-- 103 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc---cCcc-cchHHHHHHHHHHhccCc--
Confidence 3456789999995444333334456778999999999999999666555542 3333 334689999999986632
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC---CCCCceeeeccCCCC--CCCCCCCCChhhH
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT---DIPDWCYVESYGSKG--KDSFTESPSVEDL 632 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 632 (715)
..--+|+|||-||.+++.++.++.+ +.-+|.+++-++........ +...|....-+-... ...+......+..
T Consensus 104 -r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSl 181 (269)
T KOG4667|consen 104 -RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESL 181 (269)
T ss_pred -eEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHH
Confidence 1123589999999999999999877 77778888877654333110 100110000000000 0000000001111
Q ss_pred HHHHhcCchhhcc--CCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch
Q 005093 633 TRFHSKSPISHIS--KVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD 699 (715)
Q Consensus 633 ~~~~~~sp~~~~~--~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 699 (715)
......+...... ..+||+|-+||..|.+||.+.+.++++.+.. .++.+++|++|.+...+..
T Consensus 182 mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 182 MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred HHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcCccchhhh
Confidence 1111111111122 2359999999999999999999999998865 7799999999999865543
No 111
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.54 E-value=1.7e-14 Score=142.60 Aligned_cols=214 Identities=16% Similarity=0.162 Sum_probs=108.8
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC---------------Cc-cchHHHHHHHhCCcEEEEEcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS---------------LS-SYSKSLAFLSSVGYSLLIVNYR 519 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~---------------~~-~~~~~~~~la~~G~~vi~~d~r 519 (715)
.|...++..+.++++.|++. .++.|+||++||-+.... .. .-......|+++||+|+++|.+
T Consensus 92 ~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~ 169 (390)
T PF12715_consen 92 EFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDAL 169 (390)
T ss_dssp EE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--T
T ss_pred EEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccc
Confidence 45566788999999999853 788999999999321110 00 0112467899999999999998
Q ss_pred CCCCCchhhhh----------------cCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC
Q 005093 520 GSLGFGEEALQ----------------SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 583 (715)
Q Consensus 520 G~~~~g~~~~~----------------~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 583 (715)
|-|+.+..... .+...+......|.+.+++||..++.+|++||+++|+||||+.++++++. .+
T Consensus 170 g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL-Dd 248 (390)
T PF12715_consen 170 GFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL-DD 248 (390)
T ss_dssp TSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--T
T ss_pred cccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc-ch
Confidence 84433221100 01111122234577789999999999999999999999999999999997 56
Q ss_pred ceeEEEecCCcchhhh---hccCCCCCCc-eeeec--cCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeC
Q 005093 584 KFVAAAARNPLCNLAL---MVGTTDIPDW-CYVES--YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGA 657 (715)
Q Consensus 584 ~~~~~v~~~~~~~~~~---~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~ 657 (715)
++++.|..+-++.+.. .....+.... .+... .....+. ...+.++......| .|+|++.|.
T Consensus 249 RIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~-----r~~D~PdIasliAP--------RPll~~nG~ 315 (390)
T PF12715_consen 249 RIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLW-----RYFDFPDIASLIAP--------RPLLFENGG 315 (390)
T ss_dssp T--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCC-----CC--HHHHHHTTTT--------S-EEESS-B
T ss_pred hhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHH-----hhCccHHHHHHhCC--------CcchhhcCC
Confidence 8888887766554321 1100000000 00000 0000000 11223333333333 699999999
Q ss_pred CCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 658 QDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 658 ~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
.|..+|. .+..|+.+ .+..+++++.||.
T Consensus 316 ~Dklf~i--V~~AY~~~-~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 316 KDKLFPI--VRRAYAIM-GAPDNFQIHHYPK 343 (390)
T ss_dssp -HHHHHH--HHHHHHHT-T-GGGEEE---GG
T ss_pred cccccHH--HHHHHHhc-CCCcceEEeeccc
Confidence 9988754 33344332 2234678888876
No 112
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.52 E-value=3.8e-13 Score=133.89 Aligned_cols=315 Identities=16% Similarity=0.153 Sum_probs=154.2
Q ss_pred cCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCccccee
Q 005093 25 KENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGIS 103 (715)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (715)
..+.+.+|||..+-...--.-..+.|++||++|+|.++.+ +..++|.|+ .+++.++||+.+... . -+..
T Consensus 18 ~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~d-g~~nly~lDL~t~~i~QLTdg~g~~--------~-~g~~ 87 (386)
T PF14583_consen 18 DTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFD-GNRNLYLLDLATGEITQLTDGPGDN--------T-FGGF 87 (386)
T ss_dssp TT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TT-SS-EEEEEETTT-EEEE---SS-B---------T-TT-E
T ss_pred CCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccC-CCcceEEEEcccCEEEECccCCCCC--------c-cceE
Confidence 4556778888776322111245578999999999998876 888999999 899999999865432 1 2677
Q ss_pred ecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcc---------------------cCCc---CcccCCc
Q 005093 104 WNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW---------------------EEDW---GETYAGK 159 (715)
Q Consensus 104 wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~---g~~~~~~ 159 (715)
+||+++.|+|+...... ..+.+...+..........|++...| .++| .+.+...
T Consensus 88 ~s~~~~~~~Yv~~~~~l--~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~ 165 (386)
T PF14583_consen 88 LSPDDRALYYVKNGRSL--RRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEAR 165 (386)
T ss_dssp E-TTSSEEEEEETTTEE--EEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC-
T ss_pred EecCCCeEEEEECCCeE--EEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhC
Confidence 99999999887532111 11111111110111111111110000 0122 2223333
Q ss_pred cCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
..+.|+.+|++||+.+.+ .....-...+.+||..... |.|+.. .. |. .-..+||.++.
T Consensus 166 p~~~i~~idl~tG~~~~v--~~~~~wlgH~~fsP~dp~l---i~fCHE-Gp-----w~---~Vd~RiW~i~~-------- 223 (386)
T PF14583_consen 166 PHCRIFTIDLKTGERKVV--FEDTDWLGHVQFSPTDPTL---IMFCHE-GP-----WD---LVDQRIWTINT-------- 223 (386)
T ss_dssp --EEEEEEETTT--EEEE--EEESS-EEEEEEETTEEEE---EEEEE--S------TT---TSS-SEEEEET--------
T ss_pred CCceEEEEECCCCceeEE--EecCccccCcccCCCCCCE---EEEecc-CC-----cc---eeceEEEEEEc--------
Confidence 457899999999999988 5666677899999955551 666642 11 11 12347999996
Q ss_pred hhhhhccCCCCCCceecCCC--CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeee
Q 005093 240 ELELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 317 (715)
Q Consensus 240 ~~~~~~~~~~~~~~~~lt~~--~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~ 317 (715)
++...+.+... ...+...-|+|||+.|+|.+.... ....-|+.+|+.+++.+.+..... -.
T Consensus 224 ---------dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~------~~~~~i~~~d~~t~~~~~~~~~p~-~~- 286 (386)
T PF14583_consen 224 ---------DGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPG------GQDFWIAGYDPDTGERRRLMEMPW-CS- 286 (386)
T ss_dssp ---------TS---EESS---TTEEEEEEEE-TTSS-EEEEEEETT------T--EEEEEE-TTT--EEEEEEE-S-EE-
T ss_pred ---------CCCcceeeecCCCCcccccccccCCCCEEEEEeecCC------CCceEEEeeCCCCCCceEEEeCCc-ee-
Confidence 66666666543 224788999999999999887542 223458888888866543321110 00
Q ss_pred ceecCCCCCccccccCCCCCCccccCCCEEEEEeee-------------CCeeEEEEEECCCCcEEEecCCCC-------
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-------------GSSQVIISVNVSSGELLRITPAES------- 377 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-------------~~~~~l~~~d~~tg~~~~l~~~~~------- 377 (715)
-+.-++||+.++--..+ ....-||.+++.++....|.....
T Consensus 287 -------------------H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~ 347 (386)
T PF14583_consen 287 -------------------HFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDG 347 (386)
T ss_dssp -------------------EEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTT
T ss_pred -------------------eeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecC
Confidence 01123455522111111 112368888998888776654321
Q ss_pred ----CceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 378 ----NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 378 ----~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.+-.+.||||+++|+|.+.. ..++.||++++.
T Consensus 348 ~~q~~hPhp~FSPDgk~VlF~Sd~-~G~~~vY~v~i~ 383 (386)
T PF14583_consen 348 DRQVTHPHPSFSPDGKWVLFRSDM-EGPPAVYLVEIP 383 (386)
T ss_dssp BSSTT----EE-TTSSEEEEEE-T-TSS-EEEEEE--
T ss_pred CCccCCCCCccCCCCCEEEEECCC-CCCccEEEEeCc
Confidence 23446899999999987755 566889998864
No 113
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.51 E-value=8.2e-13 Score=132.29 Aligned_cols=242 Identities=17% Similarity=0.159 Sum_probs=151.0
Q ss_pred CCceEEEEEEecCCC---CCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 461 AQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~---~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
||..+..-.+.+.+- ......|+||++||-.+.+.......++..+.++||.|++++.||.++.--.. +.-+.
T Consensus 102 DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT----pr~f~ 177 (409)
T KOG1838|consen 102 DGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT----PRLFT 177 (409)
T ss_pred CCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC----Cceee
Confidence 555555555545432 12357799999999666554444555677778999999999999965542221 22233
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcchh--hhhcc----------
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNL--ALMVG---------- 602 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~~~--~~~~~---------- 602 (715)
....+|+..+++++.++. ...++..+|.||||.+...++++.. .+.+|+++.+|+--. .....
T Consensus 178 ag~t~Dl~~~v~~i~~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~ 255 (409)
T KOG1838|consen 178 AGWTEDLREVVNHIKKRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNR 255 (409)
T ss_pred cCCHHHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHH
Confidence 345789999999999985 4568999999999999998887643 355666666665421 00000
Q ss_pred -----------------CCCCCCceeee------ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCC
Q 005093 603 -----------------TTDIPDWCYVE------SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 603 -----------------~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D 659 (715)
..+..++.... .+.......+.+.+ .-.+.|...|+..++++|++|+|+|+..+|
T Consensus 256 ~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~--~~deYY~~aSs~~~v~~I~VP~L~ina~DD 333 (409)
T KOG1838|consen 256 ALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFK--SVDEYYKKASSSNYVDKIKVPLLCINAADD 333 (409)
T ss_pred HHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCC--cHHHHHhhcchhhhcccccccEEEEecCCC
Confidence 00000000000 00000011111222 234667788999999999999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC---chHHHHHH-HHHHHHHh
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ---SDFESFLN-IGLWFKKY 713 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~-i~~wl~~~ 713 (715)
+++|.+ +...-+. ..+..+-+++-..+||--..+. +...++++ +.+||...
T Consensus 334 Pv~p~~-~ip~~~~--~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 334 PVVPEE-AIPIDDI--KSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred CCCCcc-cCCHHHH--hcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 999875 2222222 2355788888888999533222 44456666 78887653
No 114
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.51 E-value=3.6e-13 Score=121.35 Aligned_cols=172 Identities=22% Similarity=0.369 Sum_probs=125.2
Q ss_pred cchHHHHHHHhCCcEEEEEcCCCCCCCchh----hh-hcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHH
Q 005093 498 SYSKSLAFLSSVGYSLLIVNYRGSLGFGEE----AL-QSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGF 572 (715)
Q Consensus 498 ~~~~~~~~la~~G~~vi~~d~rG~~~~g~~----~~-~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~ 572 (715)
.....+..+|..||.|++||+-....+..+ .. .-..+.-......++...++||..++ +..+|+++|++|||.
T Consensus 55 n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak 132 (242)
T KOG3043|consen 55 NTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAK 132 (242)
T ss_pred HHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecce
Confidence 345567788999999999996532111111 00 00111122334779999999999875 578999999999999
Q ss_pred HHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEE
Q 005093 573 LTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTI 652 (715)
Q Consensus 573 ~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~L 652 (715)
++..+....| +|.++++..|..- . ...+..+++|+|
T Consensus 133 ~vv~~~~~~~-~f~a~v~~hps~~-------------------------------d------------~~D~~~vk~Pil 168 (242)
T KOG3043|consen 133 VVVTLSAKDP-EFDAGVSFHPSFV-------------------------------D------------SADIANVKAPIL 168 (242)
T ss_pred EEEEeeccch-hheeeeEecCCcC-------------------------------C------------hhHHhcCCCCEE
Confidence 9988877765 7888887776421 0 122356789999
Q ss_pred EEeeCCCCcCCchHHHHHHHHHHHcCC-cEEEEEeCCCCccCCC-------C---CchHHHHHHHHHHHHHhcC
Q 005093 653 FLLGAQDLRVPVSNGLQYARALREKGV-ETKVIVFPNDVHGIER-------P---QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 653 ii~G~~D~~v~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~~-------~---~~~~~~~~~i~~wl~~~l~ 715 (715)
++.++.|..+|+....++-+.+++... ..++.+|++.+|+|.. + ...++.++++++||++|++
T Consensus 169 fl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 169 FLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred EEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999998888888887533 3579999999999873 1 2235678899999999974
No 115
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.49 E-value=1.9e-13 Score=130.36 Aligned_cols=174 Identities=21% Similarity=0.237 Sum_probs=97.3
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-C----CCCCceeeecc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-T----DIPDWCYVESY 615 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-~----~~~~~~~~~~~ 615 (715)
++-+.++++||.+++.++.++|+|+|.|.||-+|+.+|..+| .++++|+.+|..-....... . ..+........
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 466789999999999999999999999999999999999988 79999998885432111000 0 00000000000
Q ss_pred C-CCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchH-HHHHHHHHHHcCCc--EEEEEeCCCCc
Q 005093 616 G-SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVE--TKVIVFPNDVH 691 (715)
Q Consensus 616 ~-~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~-~~~~~~~l~~~g~~--~~~~~~~~~~H 691 (715)
. ......+...........-......-.+.++++|+|++.|++|.+.|... +..+.++|++++.+ ++++.|+++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 0 00000000000000000000111123467889999999999999988654 45677788888765 88899999999
Q ss_pred cCCCC---------------------------CchHHHHHHHHHHHHHhcC
Q 005093 692 GIERP---------------------------QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 692 ~~~~~---------------------------~~~~~~~~~i~~wl~~~l~ 715 (715)
.+..+ ...++.++.+++||+++|+
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 76421 1346789999999999985
No 116
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.47 E-value=5.2e-13 Score=135.33 Aligned_cols=220 Identities=19% Similarity=0.233 Sum_probs=133.8
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhC-CcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~-G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
...|.||++||.+. +...|...+..|... |+.|+++|+.| +|.... .+. -......+....+..+.....
T Consensus 56 ~~~~pvlllHGF~~--~~~~w~~~~~~L~~~~~~~v~aiDl~G---~g~~s~--~~~-~~~y~~~~~v~~i~~~~~~~~- 126 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGA--SSFSWRRVVPLLSKAKGLRVLAIDLPG---HGYSSP--LPR-GPLYTLRELVELIRRFVKEVF- 126 (326)
T ss_pred CCCCcEEEeccccC--CcccHhhhccccccccceEEEEEecCC---CCcCCC--CCC-CCceehhHHHHHHHHHHHhhc-
Confidence 56788999999444 356787777777554 69999999999 442211 111 111446666666655555432
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCCceeEEE---ecCCcchhhhhc------------cCC---------CCCCceeee
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAA---ARNPLCNLALMV------------GTT---------DIPDWCYVE 613 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v---~~~~~~~~~~~~------------~~~---------~~~~~~~~~ 613 (715)
..++.++|||+||.+++.+|+.+|+.++.++ +.++........ ... .... .+..
T Consensus 127 -~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~ 204 (326)
T KOG1454|consen 127 -VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVR-LVSE 204 (326)
T ss_pred -CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchh-heeH
Confidence 3559999999999999999999999999999 555433211000 000 0000 0000
Q ss_pred ccCCCCCCCCCC-CCChhhH--------------HH-------HH--hcCchhhccCCC-CcEEEEeeCCCCcCCchHHH
Q 005093 614 SYGSKGKDSFTE-SPSVEDL--------------TR-------FH--SKSPISHISKVK-TPTIFLLGAQDLRVPVSNGL 668 (715)
Q Consensus 614 ~~~~~~~~~~~~-~~~~~~~--------------~~-------~~--~~sp~~~~~~i~-~P~Lii~G~~D~~v~~~~~~ 668 (715)
.+.......+.. ....+.. +. .. ...+...+.++. +|+||++|+.|+.+|.+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 205 GLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHH
Confidence 000000000000 0000000 00 00 122334566676 99999999999999988666
Q ss_pred HHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 669 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 669 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
.+.+.+ ..+++++++++||.... +..+.+.+.|..|+.++.
T Consensus 285 ~~~~~~----pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 285 ELKKKL----PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARLR 325 (326)
T ss_pred HHHhhC----CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHhc
Confidence 655554 45899999999997665 666789999999998763
No 117
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.47 E-value=4.8e-13 Score=139.14 Aligned_cols=198 Identities=15% Similarity=0.128 Sum_probs=114.1
Q ss_pred chHHHH---HHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce-EEEEEeChhHHHH
Q 005093 499 YSKSLA---FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLT 574 (715)
Q Consensus 499 ~~~~~~---~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~-i~l~G~S~GG~~a 574 (715)
|...+. .|...+|.|+++|+|| +|.+. ... ....+..+.+..+++.- +.++ +.|+||||||+++
T Consensus 85 w~~~v~~~~~L~~~~~~Vi~~Dl~G---~g~s~----~~~---~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA 152 (343)
T PRK08775 85 WEGLVGSGRALDPARFRLLAFDFIG---ADGSL----DVP---IDTADQADAIALLLDAL--GIARLHAFVGYSYGALVG 152 (343)
T ss_pred chhccCCCCccCccccEEEEEeCCC---CCCCC----CCC---CCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHH
Confidence 444554 4545679999999998 55442 111 12344444444444442 3345 5799999999999
Q ss_pred HHHHhhCCCceeEEEecCCcchhhh----hcc-------CC-C--CC-C------ceeeeccCC-C-CCCCCCCCC----
Q 005093 575 THLIGQAPDKFVAAAARNPLCNLAL----MVG-------TT-D--IP-D------WCYVESYGS-K-GKDSFTESP---- 627 (715)
Q Consensus 575 ~~~a~~~p~~~~~~v~~~~~~~~~~----~~~-------~~-~--~~-~------~~~~~~~~~-~-~~~~~~~~~---- 627 (715)
+.++.++|++++++|++++...... ... .. . .. . ......+.. . ....+....
T Consensus 153 ~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (343)
T PRK08775 153 LQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVIN 232 (343)
T ss_pred HHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccC
Confidence 9999999999999999987532110 000 00 0 00 0 000000000 0 000000000
Q ss_pred -----Chh-hH-----HHHHhcCc-------------hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEE
Q 005093 628 -----SVE-DL-----TRFHSKSP-------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 683 (715)
Q Consensus 628 -----~~~-~~-----~~~~~~sp-------------~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 683 (715)
... .. ......++ ...+.++++|+|+++|+.|..+|+..+.++.+.+. ...++
T Consensus 233 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~---p~a~l 309 (343)
T PRK08775 233 GRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG---PRGSL 309 (343)
T ss_pred CCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC---CCCeE
Confidence 000 00 00000000 11256789999999999999999888777766653 23778
Q ss_pred EEeCC-CCccCCCCCchHHHHHHHHHHHHH
Q 005093 684 IVFPN-DVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 684 ~~~~~-~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+++++ +||....++ ...+.+.+.+||++
T Consensus 310 ~~i~~~aGH~~~lE~-Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 310 RVLRSPYGHDAFLKE-TDRIDAILTTALRS 338 (343)
T ss_pred EEEeCCccHHHHhcC-HHHHHHHHHHHHHh
Confidence 89985 999876554 45888889999975
No 118
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.39 E-value=6.8e-12 Score=153.14 Aligned_cols=224 Identities=17% Similarity=0.237 Sum_probs=132.6
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC-CC--CCCccchhhHHHHHHHHHHcCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-PG--KVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~-~~--~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
..|.||++||.+.+ ...|...+..|.+ +|.|+++|+|| ||.+..... .. ......++++.+.+..++++
T Consensus 1370 ~~~~vVllHG~~~s--~~~w~~~~~~L~~-~~rVi~~Dl~G---~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~-- 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGT--GEDWIPIMKAISG-SARCISIDLPG---HGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH-- 1441 (1655)
T ss_pred CCCeEEEECCCCCC--HHHHHHHHHHHhC-CCEEEEEcCCC---CCCCCCccccccccccccCCHHHHHHHHHHHHHH--
Confidence 45789999996655 4467777777754 69999999999 554432110 00 01122356666666555554
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-----cCCCCC--Cc-------eeeecc-CCCCCC
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-----GTTDIP--DW-------CYVESY-GSKGKD 621 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----~~~~~~--~~-------~~~~~~-~~~~~~ 621 (715)
...+++.|+||||||.+++.++.++|++++++|++++...+.... ...... .. .+...+ ......
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 1521 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWK 1521 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhh
Confidence 245789999999999999999999999999999887643211000 000000 00 000000 000000
Q ss_pred CCCCCC-------------ChhhHH-HHHh------cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC---
Q 005093 622 SFTESP-------------SVEDLT-RFHS------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG--- 678 (715)
Q Consensus 622 ~~~~~~-------------~~~~~~-~~~~------~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g--- 678 (715)
.....+ ...... .+.. .+....+.++++|+|+++|++|..++ ..+.++.+.+.+..
T Consensus 1522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~ 1600 (1655)
T PLN02980 1522 SLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESG 1600 (1655)
T ss_pred hhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccc
Confidence 000000 000000 0000 11123467889999999999999775 55666666664420
Q ss_pred -----CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 679 -----VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 679 -----~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
..+++++++++||....++ ...+.+.|.+||++.
T Consensus 1601 ~~~~~~~a~lvvI~~aGH~~~lE~-Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1601 NDKGKEIIEIVEIPNCGHAVHLEN-PLPVIRALRKFLTRL 1639 (1655)
T ss_pred ccccccceEEEEECCCCCchHHHC-HHHHHHHHHHHHHhc
Confidence 1268999999999876544 457888999999763
No 119
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.39 E-value=3e-11 Score=114.98 Aligned_cols=177 Identities=19% Similarity=0.193 Sum_probs=119.2
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHH
Q 005093 467 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 546 (715)
Q Consensus 467 ~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~ 546 (715)
..++.|. ..+.+|+|||+||.. .....|...++.+|+.||+|+.+|+..... .....+++++.+
T Consensus 6 l~v~~P~---~~g~yPVv~f~~G~~--~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~~~~ 69 (259)
T PF12740_consen 6 LLVYYPS---SAGTYPVVLFLHGFL--LINSWYSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVASAAE 69 (259)
T ss_pred eEEEecC---CCCCcCEEEEeCCcC--CCHHHHHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHHHHH
Confidence 3578898 678899999999954 223457888999999999999999654221 112234778888
Q ss_pred HHHHHHHcC--------CCCCceEEEEEeChhHHHHHHHHhhC-----CCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 547 AIDHVIDMG--------LANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 547 ~i~~l~~~~--------~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
.++|+.+.- .+|-++|+|+|||.||-+++.++..+ +.+|++++++.|+-.+...... .
T Consensus 70 vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~-~-------- 140 (259)
T PF12740_consen 70 VIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT-E-------- 140 (259)
T ss_pred HHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC-C--------
Confidence 899987731 25888999999999999999998876 4589999999998632211000 0
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCC--------cC-Cch-HHHHHHHHHHHcCCcEEE
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL--------RV-PVS-NGLQYARALREKGVETKV 683 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~--------~v-~~~-~~~~~~~~l~~~g~~~~~ 683 (715)
|. .....| ..-+...|+|++...-.. .| |.. +-.+|+++. ..+.-.
T Consensus 141 -------------P~------v~~~~p--~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~---~~p~~~ 196 (259)
T PF12740_consen 141 -------------PP------VLTYTP--QSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDEC---KPPSWH 196 (259)
T ss_pred -------------Cc------cccCcc--cccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhc---CCCEEE
Confidence 00 000001 111245899999766663 23 322 234566665 346777
Q ss_pred EEeCCCCcc
Q 005093 684 IVFPNDVHG 692 (715)
Q Consensus 684 ~~~~~~~H~ 692 (715)
++..+.||.
T Consensus 197 ~v~~~~GH~ 205 (259)
T PF12740_consen 197 FVAKDYGHM 205 (259)
T ss_pred EEeCCCCch
Confidence 788999995
No 120
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.38 E-value=1.2e-10 Score=112.21 Aligned_cols=300 Identities=20% Similarity=0.277 Sum_probs=165.5
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+..+-+.+...+|||+|++||--+ ......+|+-....++..+. +... |+..++|||||++||-.+.+
T Consensus 111 ~~GH~e~Vl~~~fsp~g~~l~tGs-----GD~TvR~WD~~TeTp~~t~K-gH~~------WVlcvawsPDgk~iASG~~d 178 (480)
T KOG0271|consen 111 IAGHGEAVLSVQFSPTGSRLVTGS-----GDTTVRLWDLDTETPLFTCK-GHKN------WVLCVAWSPDGKKIASGSKD 178 (480)
T ss_pred cCCCCCcEEEEEecCCCceEEecC-----CCceEEeeccCCCCcceeec-CCcc------EEEEEEECCCcchhhccccC
Confidence 444556688899999999998432 22445566322233444332 2222 44899999999999987655
Q ss_pred CCCCCCCccCCC-CCCCCCCcCCCCCCCCCcccCCc----Cccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEE
Q 005093 118 PSPSKPTFSLGS-TKGGSSDKDCNSWKGQGDWEEDW----GETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW 191 (715)
Q Consensus 118 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~ 191 (715)
.... .|.... .+.+........|+..+.|.|-- ...+ ...+.+.+.+||+..|...... ......+.-+.|
T Consensus 179 g~I~--lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l-sgHT~~VTCvrw 255 (480)
T KOG0271|consen 179 GSIR--LWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL-SGHTASVTCVRW 255 (480)
T ss_pred CeEE--EecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe-ccCccceEEEEE
Confidence 4322 333222 23445555667777777765521 1111 2233588999999887755441 333446777888
Q ss_pred ecCCCCCccEEEEEeecCccceeeeee-----eecCCce---EEEEecc-------------ccc-c----------hhh
Q 005093 192 APLNEGLHQYLVFVGWSSETRKLGIKY-----CYNRPCA---LYAVRVS-------------LYK-S----------EAS 239 (715)
Q Consensus 192 spdg~~~~~~i~~~~~~~~~~~~g~~~-----~~~~~~~---i~~~~~~-------------~~~-~----------~~~ 239 (715)
-- +. ++|++..+..-+ -|+. |-+..++ |-.+++. +.. + +-|
T Consensus 256 GG--~g----liySgS~DrtIk-vw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY 328 (480)
T KOG0271|consen 256 GG--EG----LIYSGSQDRTIK-VWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERY 328 (480)
T ss_pred cC--Cc----eEEecCCCceEE-EEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHH
Confidence 63 44 777764433111 0000 0000011 1111221 000 0 011
Q ss_pred hhhhhcc------------------CCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC
Q 005093 240 ELELKES------------------SSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 301 (715)
Q Consensus 240 ~~~~~~~------------------~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~ 301 (715)
+.-.+.. ....+...++|.+..-+..+.|||||++||-.+.+. .+.+++..
T Consensus 329 ~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDk-----------SVkLW~g~ 397 (480)
T KOG0271|consen 329 EAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDK-----------SVKLWDGR 397 (480)
T ss_pred HHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeeccc-----------ceeeeeCC
Confidence 1111100 111223445566666688999999999999888774 36677767
Q ss_pred CCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCCCCce
Q 005093 302 TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAESNFS 380 (715)
Q Consensus 302 ~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~~~~ 380 (715)
+|+... .|.| +...++.++|+.|.+ |+++.+.+..-.+| ++.++++.. |......+.
T Consensus 398 tGk~la------------------sfRG-Hv~~VYqvawsaDsR-LlVS~SkDsTLKvw--~V~tkKl~~DLpGh~DEVf 455 (480)
T KOG0271|consen 398 TGKFLA------------------SFRG-HVAAVYQVAWSADSR-LLVSGSKDSTLKVW--DVRTKKLKQDLPGHADEVF 455 (480)
T ss_pred Ccchhh------------------hhhh-ccceeEEEEeccCcc-EEEEcCCCceEEEE--EeeeeeecccCCCCCceEE
Confidence 766421 1222 222456889999986 77777766544454 555666554 443444344
Q ss_pred eEEEeecCCEEE
Q 005093 381 WSLLTLDGDNII 392 (715)
Q Consensus 381 ~~~~s~~~~~l~ 392 (715)
...+++||+++.
T Consensus 456 ~vDwspDG~rV~ 467 (480)
T KOG0271|consen 456 AVDWSPDGQRVA 467 (480)
T ss_pred EEEecCCCceee
Confidence 457889988764
No 121
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.38 E-value=7.5e-12 Score=130.25 Aligned_cols=231 Identities=12% Similarity=0.086 Sum_probs=136.5
Q ss_pred CCCcEEEEEcCCCCCCCC----------ccch-HHH---HHHHhCCcEEEEEcCCCCCC-----Cchh---hhhcC----
Q 005093 479 SCDPLIVVLHGGPHSVSL----------SSYS-KSL---AFLSSVGYSLLIVNYRGSLG-----FGEE---ALQSL---- 532 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~----------~~~~-~~~---~~la~~G~~vi~~d~rG~~~-----~g~~---~~~~~---- 532 (715)
.+.++||++|+-...... ..|. .++ ..+--.-|-||++|..|++. +|.. ..+..
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 456999999993332100 1222 222 13445669999999998542 1211 11110
Q ss_pred -CCCCCccchhhHHHHHHHHHHcCCCCCceEE-EEEeChhHHHHHHHHhhCCCceeEEEecCCcchh--------hh-hc
Q 005093 533 -PGKVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL--------AL-MV 601 (715)
Q Consensus 533 -~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~--------~~-~~ 601 (715)
..+.....+.|+.+++..+++.- ..+++. ++||||||++++.++.++|++++.+|+++..... .. ..
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHH
Confidence 01233356888888887777763 346775 9999999999999999999999999988653211 00 00
Q ss_pred -cCCCCCCce---e---------------------------eeccCCCCCCCC---CCCCChhhHHHHH-----------
Q 005093 602 -GTTDIPDWC---Y---------------------------VESYGSKGKDSF---TESPSVEDLTRFH----------- 636 (715)
Q Consensus 602 -~~~~~~~~~---~---------------------------~~~~~~~~~~~~---~~~~~~~~~~~~~----------- 636 (715)
....-+.|. | ...+........ .........+.|.
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 000000010 0 000000000000 0000000001110
Q ss_pred -------------hc-------CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC-CCccCCC
Q 005093 637 -------------SK-------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DVHGIER 695 (715)
Q Consensus 637 -------------~~-------sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~ 695 (715)
.. +....+.++++|+|+++|+.|..+|++.++.+.+.+...+..++++++++ .||....
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l 371 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV 371 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh
Confidence 01 22345668899999999999999999999999888876666789999986 8997664
Q ss_pred CCchHHHHHHHHHHHHH
Q 005093 696 PQSDFESFLNIGLWFKK 712 (715)
Q Consensus 696 ~~~~~~~~~~i~~wl~~ 712 (715)
. ...++.+.|.+||++
T Consensus 372 e-~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 372 F-DIHLFEKKIYEFLNR 387 (389)
T ss_pred c-CHHHHHHHHHHHHcc
Confidence 4 344788889999865
No 122
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.37 E-value=4e-10 Score=115.34 Aligned_cols=273 Identities=14% Similarity=0.060 Sum_probs=152.6
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (715)
.....++++|+.+... .+..... ......+|||||+.++.....+ ..++.++ .+++....+......
T Consensus 8 ~~d~~v~~~d~~t~~~--~~~~~~~-----~~~~~l~~~~dg~~l~~~~~~~---~~v~~~d~~~~~~~~~~~~~~~~-- 75 (300)
T TIGR03866 8 EKDNTISVIDTATLEV--TRTFPVG-----QRPRGITLSKDGKLLYVCASDS---DTIQVIDLATGEVIGTLPSGPDP-- 75 (300)
T ss_pred cCCCEEEEEECCCCce--EEEEECC-----CCCCceEECCCCCEEEEEECCC---CeEEEEECCCCcEEEeccCCCCc--
Confidence 3445677777755431 2111111 3356689999999876554322 2344444 444444333222222
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
..+.|+|||+.|+..... ...|++||+.+
T Consensus 76 --------~~~~~~~~g~~l~~~~~~-------------------------------------------~~~l~~~d~~~ 104 (300)
T TIGR03866 76 --------ELFALHPNGKILYIANED-------------------------------------------DNLVTVIDIET 104 (300)
T ss_pred --------cEEEECCCCCEEEEEcCC-------------------------------------------CCeEEEEECCC
Confidence 578999999977664221 15699999988
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
++.... .........+.|+|||+. +++.... ...++.+|+ .++
T Consensus 105 ~~~~~~--~~~~~~~~~~~~~~dg~~----l~~~~~~--------------~~~~~~~d~-----------------~~~ 147 (300)
T TIGR03866 105 RKVLAE--IPVGVEPEGMAVSPDGKI----VVNTSET--------------TNMAHFIDT-----------------KTY 147 (300)
T ss_pred CeEEeE--eeCCCCcceEEECCCCCE----EEEEecC--------------CCeEEEEeC-----------------CCC
Confidence 654332 222234567899999997 7765421 113555675 444
Q ss_pred CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-CCcccceeeeeeceecCCCCCcccc
Q 005093 252 PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVDVIPVVQCAEGDCFPGL 330 (715)
Q Consensus 252 ~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~g~ 330 (715)
+...............|+|||++|++.+..+ ..|+++|+.+++. ..++.... ...++
T Consensus 148 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----------~~v~i~d~~~~~~~~~~~~~~~-----------~~~~~- 205 (300)
T TIGR03866 148 EIVDNVLVDQRPRFAEFTADGKELWVSSEIG----------GTVSVIDVATRKVIKKITFEIP-----------GVHPE- 205 (300)
T ss_pred eEEEEEEcCCCccEEEECCCCCEEEEEcCCC----------CEEEEEEcCcceeeeeeeeccc-----------ccccc-
Confidence 4322111222345689999999887665432 2488889887543 11111000 00000
Q ss_pred ccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 331 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 331 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
......+.|++||+.+++.... ...+..+|+++++...............|++++..|+.... .-..|.+.++.
T Consensus 206 -~~~~~~i~~s~dg~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~---~~~~i~v~d~~ 279 (300)
T TIGR03866 206 -AVQPVGIKLTKDGKTAFVALGP--ANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNG---VSNDVSVIDVA 279 (300)
T ss_pred -cCCccceEECCCCCEEEEEcCC--CCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcC---CCCeEEEEECC
Confidence 0012356789999977665432 24688889988887654332222344578899888765432 12247788876
Q ss_pred ccC
Q 005093 411 DKA 413 (715)
Q Consensus 411 ~~~ 413 (715)
+++
T Consensus 280 ~~~ 282 (300)
T TIGR03866 280 ALK 282 (300)
T ss_pred CCc
Confidence 543
No 123
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=3.6e-11 Score=113.76 Aligned_cols=130 Identities=22% Similarity=0.188 Sum_probs=93.3
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC-----
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL----- 532 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~----- 532 (715)
...|...++++|.|.+.. ...|+||++||+..+.... ....+-......||.|+.||- +...|....
T Consensus 41 ~~~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg-----~~~~wn~~~~~~~~ 113 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDG-----YDRAWNANGCGNWF 113 (312)
T ss_pred ccCCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCc-----cccccCCCcccccC
Confidence 346778889999998743 3349999999966543211 111222334578999999962 222221111
Q ss_pred ---CCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 533 ---PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 533 ---~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
...-+..++..+.+.++.|..+..+|+.||+|.|.|.||.|+..+++.+|+.|.++..+++..
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 112233457778899999999999999999999999999999999999999999998887754
No 124
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.35 E-value=6.7e-11 Score=123.78 Aligned_cols=196 Identities=15% Similarity=0.129 Sum_probs=123.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCC----cEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G----~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
-|.+...++|.|+++. .+++|+|+++||..+.... .....+..|.++| .+++++|.......... +..
T Consensus 190 Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~-~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~e----l~~-- 261 (411)
T PRK10439 190 LGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESM-PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQE----LPC-- 261 (411)
T ss_pred cCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcC-CHHHHHHHHHHcCCCCceEEEEECCCCccccccc----CCc--
Confidence 4567888999999876 6789999999997654322 2334556666677 34678875321111100 111
Q ss_pred Cccchh-hH-HHHHHHHHHcCC--CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 537 GSQDVN-DV-LTAIDHVIDMGL--ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 537 ~~~~~~-d~-~~~i~~l~~~~~--~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
..... .+ .+.+-++.++.. .|+++.+|+|+||||+.|++++.++|++|.+++++||.+-+...
T Consensus 262 -~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~------------ 328 (411)
T PRK10439 262 -NADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHR------------ 328 (411)
T ss_pred -hHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCc------------
Confidence 11111 12 133345555432 47789999999999999999999999999999999986421100
Q ss_pred eccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc
Q 005093 613 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
... ......+.+... ....-...++|-+|..|... ...+.++++.|+++|.++++.+++| ||.
T Consensus 329 --~~~---------~~~~l~~~l~~~----~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd 391 (411)
T PRK10439 329 --GGQ---------QEGVLLEQLKAG----EVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHD 391 (411)
T ss_pred --cCC---------chhHHHHHHHhc----ccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcC
Confidence 000 000011111110 01112245888899998543 4667899999999999999999987 686
Q ss_pred CC
Q 005093 693 IE 694 (715)
Q Consensus 693 ~~ 694 (715)
..
T Consensus 392 ~~ 393 (411)
T PRK10439 392 AL 393 (411)
T ss_pred HH
Confidence 54
No 125
>PRK05855 short chain dehydrogenase; Validated
Probab=99.34 E-value=1.4e-11 Score=138.86 Aligned_cols=105 Identities=13% Similarity=0.217 Sum_probs=67.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|.+++...+-+ ...|.||++||.+.. ...|...+..| ..||.|+++|+|| +|.+.... .....
T Consensus 10 ~~g~~l~~~~~g~------~~~~~ivllHG~~~~--~~~w~~~~~~L-~~~~~Vi~~D~~G---~G~S~~~~---~~~~~ 74 (582)
T PRK05855 10 SDGVRLAVYEWGD------PDRPTVVLVHGYPDN--HEVWDGVAPLL-ADRFRVVAYDVRG---AGRSSAPK---RTAAY 74 (582)
T ss_pred eCCEEEEEEEcCC------CCCCeEEEEcCCCch--HHHHHHHHHHh-hcceEEEEecCCC---CCCCCCCC---ccccc
Confidence 4677887655422 236889999996644 45677777878 6789999999999 55543211 11122
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
..++..+.+..+++.-.. ..++.|+||||||.+++.++..
T Consensus 75 ~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 75 TLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 344444444444333111 2359999999999998877765
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.32 E-value=9.1e-12 Score=110.02 Aligned_cols=180 Identities=16% Similarity=0.159 Sum_probs=130.8
Q ss_pred CCCcEEEEEcCCCCCCCCccc-hHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~-~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
...|++||+|||.|..+.... ...+..+..+||.|+.++|--++. .......+.++...++|+.+.. -
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----------~htL~qt~~~~~~gv~filk~~-~ 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----------VHTLEQTMTQFTHGVNFILKYT-E 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc----------cccHHHHHHHHHHHHHHHHHhc-c
Confidence 467999999999987654432 235566779999999999876432 1233445788999999998864 2
Q ss_pred CCceEEEEEeChhHHHHHHHHhh-CCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHH
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 636 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (715)
..+++.+.|||.|+.+++.+.++ +..++.++++.++++++..+..+....+. +. ..+...
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dl------gL-------------t~~~ae 194 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDL------GL-------------TERNAE 194 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccccc------Cc-------------ccchhh
Confidence 34668888999999999988775 45589999999999998877554322111 10 001122
Q ss_pred hcCc-hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc
Q 005093 637 SKSP-ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 637 ~~sp-~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
..|| +.....++.|+|++.+.+|..--.+|.+.+...+++ ..+..|++.+|.
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy 247 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHY 247 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchh
Confidence 2333 234566788999999999988778999999999887 667799999994
No 127
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.31 E-value=4.3e-11 Score=125.35 Aligned_cols=130 Identities=17% Similarity=0.175 Sum_probs=101.4
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc---hHHH---HHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY---SKSL---AFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~---~~~~---~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
-.||++|...+|+|+ ..++.|+++..+-.|.......+ .... ..++++||+|+..|.||++++...+.
T Consensus 26 MRDGvrL~~dIy~Pa---~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~--- 99 (563)
T COG2936 26 MRDGVRLAADIYRPA---GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFD--- 99 (563)
T ss_pred ecCCeEEEEEEEccC---CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccc---
Confidence 348999999999998 56899999999844443321111 1112 36899999999999999877655542
Q ss_pred CCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchh
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 597 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~ 597 (715)
.+...+.+|..+.|+|+.++++. ..+|+++|.|++|+..+++|+..|...|+++..++..+.
T Consensus 100 --~~~~~E~~Dg~D~I~Wia~QpWs-NG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 100 --PESSREAEDGYDTIEWLAKQPWS-NGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred --eeccccccchhHHHHHHHhCCcc-CCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 12224688999999999999865 478999999999999999999999999999998887764
No 128
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.30 E-value=3.3e-12 Score=126.99 Aligned_cols=218 Identities=17% Similarity=0.167 Sum_probs=125.1
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCC-CCCCCCccchHHHHHHHhCC----cEEEEEcCCCCCCCchhhhh------
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGG-PHSVSLSSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEEALQ------ 530 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg-~~~~~~~~~~~~~~~la~~G----~~vi~~d~rG~~~~g~~~~~------ 530 (715)
|.++..++|+|+++...+++|+|+++||. .+.. .......+..+.+.| ..+++++..+.......+..
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~-~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFR-NGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHH-HHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccc-cchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 56788899999998888999999999994 2110 001122333344443 45666665443311111110
Q ss_pred cCCCCCCccchhhHH--HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh-hccCCCCC
Q 005093 531 SLPGKVGSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-MVGTTDIP 607 (715)
Q Consensus 531 ~~~~~~~~~~~~d~~--~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-~~~~~~~~ 607 (715)
......+.....+.. +.+.++.++..+.+++.+|+|+||||+.|+.++.++|+.|.+++++||.++... +....
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~--- 160 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPS--- 160 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHS---
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcC---
Confidence 011111111223322 556677777666666699999999999999999999999999999999865431 10000
Q ss_pred CceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhh-----ccCCCCcEEEEeeCCCCcCCc----------hHHHHHHH
Q 005093 608 DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-----ISKVKTPTIFLLGAQDLRVPV----------SNGLQYAR 672 (715)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-----~~~i~~P~Lii~G~~D~~v~~----------~~~~~~~~ 672 (715)
....+...++... ...-..++++..|+.|..... .....+.+
T Consensus 161 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~ 217 (251)
T PF00756_consen 161 -----------------------DDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQ 217 (251)
T ss_dssp -----------------------TCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHH
T ss_pred -----------------------CcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHH
Confidence 0011112222211 122346789999999984321 12223333
Q ss_pred HHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 673 ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 673 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
.|+.++.+..+..++| +|.+.. ....+...+.||
T Consensus 218 ~l~~~g~~~~~~~~~G-~H~~~~---W~~~l~~~L~~~ 251 (251)
T PF00756_consen 218 LLKAKGIPHTYHVFPG-GHDWAY---WRRRLPDALPWM 251 (251)
T ss_dssp HCCCEECTTESEEEHS-ESSHHH---HHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEecC-ccchhh---HHHHHHHHHhhC
Confidence 4445577888888884 675432 234455555554
No 129
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.28 E-value=3.3e-12 Score=112.38 Aligned_cols=213 Identities=16% Similarity=0.164 Sum_probs=126.8
Q ss_pred EEEEEcCCCCCCCCccchHHHHHH-HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc--chhhHHHHHHHHHHcCCCCC
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ--DVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~--~~~d~~~~i~~l~~~~~~d~ 559 (715)
.|+++.|.-++ ....|......+ ...-+.+++.|.|| ||.+-. +..-... -.+|...+++.+... +.
T Consensus 44 ~iLlipGalGs-~~tDf~pql~~l~k~l~~TivawDPpG---YG~SrP---P~Rkf~~~ff~~Da~~avdLM~aL---k~ 113 (277)
T KOG2984|consen 44 YILLIPGALGS-YKTDFPPQLLSLFKPLQVTIVAWDPPG---YGTSRP---PERKFEVQFFMKDAEYAVDLMEAL---KL 113 (277)
T ss_pred eeEeccccccc-ccccCCHHHHhcCCCCceEEEEECCCC---CCCCCC---CcccchHHHHHHhHHHHHHHHHHh---CC
Confidence 57777774433 244566555444 33349999999999 766531 1111111 145777777766654 56
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchh-----hhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHH
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-----ALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 634 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (715)
+++.|+|+|-||..++.+|+++++.+..+|...+..-. ..+.+..+...|.-.. .......|........++.
T Consensus 114 ~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~--R~P~e~~Yg~e~f~~~wa~ 191 (277)
T KOG2984|consen 114 EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARG--RQPYEDHYGPETFRTQWAA 191 (277)
T ss_pred CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhh--cchHHHhcCHHHHHHHHHH
Confidence 89999999999999999999999988887776653311 1111222222232100 0000000000000011111
Q ss_pred HH-------hc----CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHH
Q 005093 635 FH-------SK----SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESF 703 (715)
Q Consensus 635 ~~-------~~----sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 703 (715)
+- .. -....+.+++||+||+||++|+.|+-.+.--+...+ .-.++.++|.++|.+...-. +++.
T Consensus 192 wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~----~~a~~~~~peGkHn~hLrya-~eFn 266 (277)
T KOG2984|consen 192 WVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK----SLAKVEIHPEGKHNFHLRYA-KEFN 266 (277)
T ss_pred HHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc----ccceEEEccCCCcceeeech-HHHH
Confidence 11 00 012347889999999999999999876654333322 34788999999999875443 4788
Q ss_pred HHHHHHHHH
Q 005093 704 LNIGLWFKK 712 (715)
Q Consensus 704 ~~i~~wl~~ 712 (715)
..+++||++
T Consensus 267 klv~dFl~~ 275 (277)
T KOG2984|consen 267 KLVLDFLKS 275 (277)
T ss_pred HHHHHHHhc
Confidence 889999975
No 130
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.25 E-value=8.6e-11 Score=125.69 Aligned_cols=124 Identities=14% Similarity=0.225 Sum_probs=81.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc---cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~---~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
++.+-|.|.. +....+.||++||........ .-..++.+|+++||.|+++|+||. |.+.. .........
T Consensus 174 ~eLi~Y~P~t--~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgp---g~s~~---~~~~ddY~~ 245 (532)
T TIGR01838 174 FQLIQYEPTT--ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNP---DASQA---DKTFDDYIR 245 (532)
T ss_pred EEEEEeCCCC--CcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCC---Ccccc---cCChhhhHH
Confidence 4555666652 222345688999954332211 123578899999999999999984 33211 111222334
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHH----HHHhhC-CCceeEEEecCCcchhh
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTT----HLIGQA-PDKFVAAAARNPLCNLA 598 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~----~~a~~~-p~~~~~~v~~~~~~~~~ 598 (715)
+++.++++.+.+. .+.+++.++|||+||.+++ .+++.+ +++++++++++..+++.
T Consensus 246 ~~i~~al~~v~~~--~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 246 DGVIAALEVVEAI--TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred HHHHHHHHHHHHh--cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 5688888888875 3568899999999999853 234454 77899999888777653
No 131
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.24 E-value=8.1e-09 Score=99.98 Aligned_cols=284 Identities=12% Similarity=0.113 Sum_probs=162.4
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCC-CCCCeEEEEe-cCCccEEEEecCcccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE-NESPIQFELW-SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 92 (715)
...|+.+++++...+ ++.-.+..++++.+..+|+|+++.|.-+.+.+ .+..--|.++ ++|+.+.+-.....-+
T Consensus 15 s~gI~v~~ld~~~g~---l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~-- 89 (346)
T COG2706 15 SQGIYVFNLDTKTGE---LSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGS-- 89 (346)
T ss_pred CCceEEEEEeCcccc---cchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCC--
Confidence 456777777755442 22233444568899999999999887665553 2444456666 5577766544322111
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCc---------c--CCCCCCCC----------CCcCCCCCCCCCcccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTF---------S--LGSTKGGS----------SDKDCNSWKGQGDWEED 151 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~---------~--~~~~~~~~----------~~~~~~~~~~~~~~~~~ 151 (715)
....++.++||++++...- .......+ . ....-.+. .......+.+++.+.+|
T Consensus 90 -----~p~yvsvd~~g~~vf~AnY-~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~D 163 (346)
T COG2706 90 -----PPCYVSVDEDGRFVFVANY-HSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPD 163 (346)
T ss_pred -----CCeEEEECCCCCEEEEEEc-cCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEee
Confidence 1157899999987755321 11111000 0 00000001 11122334456667777
Q ss_pred cCcccCCccCceEEEEEccCCceEeec--CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEE
Q 005093 152 WGETYAGKRQPSLFVININSGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 229 (715)
Q Consensus 152 ~g~~~~~~~~~~l~~~~~~~g~~~~l~--~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~ 229 (715)
.|+ ..|++++++.|.+...+ ..........+.|+|+|+ ++|...+ .++.|-++
T Consensus 164 LG~-------Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k-----~aY~v~E-------------L~stV~v~ 218 (346)
T COG2706 164 LGT-------DRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGK-----YAYLVNE-------------LNSTVDVL 218 (346)
T ss_pred cCC-------ceEEEEEcccCccccccccccCCCCCcceEEEcCCCc-----EEEEEec-------------cCCEEEEE
Confidence 654 78888888888766553 123344677899999999 6776532 22233333
Q ss_pred ecccccchhhhhhhhccCCCCCCceecCC---------CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeec
Q 005093 230 RVSLYKSEASELELKESSSEDLPVVNLTE---------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 300 (715)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~lt~---------~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~ 300 (715)
..+ ...++.+.|.. ...+...+..||||++| |++++. ...-.+|.+|-
T Consensus 219 ~y~---------------~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFL-YasNRg-------~dsI~~f~V~~ 275 (346)
T COG2706 219 EYN---------------PAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFL-YASNRG-------HDSIAVFSVDP 275 (346)
T ss_pred EEc---------------CCCceEEEeeeeccCccccCCCCceeEEEECCCCCEE-EEecCC-------CCeEEEEEEcC
Confidence 321 13455444322 23346778899999966 788884 12222444443
Q ss_pred CCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 301 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 301 ~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
.++.. .+ +..+ ...+. .+..+.+.++|+.|++...+.+...+|++|.+||+...+..
T Consensus 276 ~~g~L-~~-------~~~~--~teg~-------~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~ 332 (346)
T COG2706 276 DGGKL-EL-------VGIT--PTEGQ-------FPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGR 332 (346)
T ss_pred CCCEE-EE-------EEEe--ccCCc-------CCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEeccc
Confidence 33321 11 1100 01111 24677789999988888777888899999999999988765
No 132
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.24 E-value=1e-10 Score=103.88 Aligned_cols=215 Identities=14% Similarity=0.150 Sum_probs=130.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch---HHHHHHHhCCcEEEEEc--CCCCCCCchh--hh----
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS---KSLAFLSSVGYSLLIVN--YRGSLGFGEE--AL---- 529 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~---~~~~~la~~G~~vi~~d--~rG~~~~g~~--~~---- 529 (715)
-+..+.--+|+|+.+..+++.|++.++-|-.... ..+. ..-+...++|++|+.|| .||..--|.+ |.
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~--~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~G 101 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTH--ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQG 101 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccc--hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCC
Confidence 3455666789998877788899999999955442 2232 23345578999999999 4664322221 10
Q ss_pred -----hcCCCCCCc--cchhhHHHHHHHHHH--cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh
Q 005093 530 -----QSLPGKVGS--QDVNDVLTAIDHVID--MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 600 (715)
Q Consensus 530 -----~~~~~~~~~--~~~~d~~~~i~~l~~--~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 600 (715)
++....|.. .+.+-+...+-.++. ...+|+.+++|.||||||+-|+..+.++|.+++.+.+.+|+++....
T Consensus 102 AGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~c 181 (283)
T KOG3101|consen 102 AGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINC 181 (283)
T ss_pred ceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccC
Confidence 011111111 111122222222222 12378999999999999999999999999999999999999875422
Q ss_pred ccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchh---hccCCCCcEEEEeeCCCCcCCchHH--HHHHHHHH
Q 005093 601 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS---HISKVKTPTIFLLGAQDLRVPVSNG--LQYARALR 675 (715)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~~~i~~P~Lii~G~~D~~v~~~~~--~~~~~~l~ 675 (715)
.| +.+...-|.+ ++...|...++.. .......-+||-.|..|...+ ++. +.+.++.+
T Consensus 182 -------pW------GqKAf~gYLG----~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~-~qLlPe~l~~a~~ 243 (283)
T KOG3101|consen 182 -------PW------GQKAFTGYLG----DNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLA-EQLLPENLLEACK 243 (283)
T ss_pred -------cc------hHHHhhcccC----CChHHHhhcchHHHHHhcCCCCccEEEecCccchhhh-hhcChHHHHHHhh
Confidence 12 2222222222 2334444555543 344444569999999999875 221 22333333
Q ss_pred Hc-CCcEEEEEeCCCCccCCC
Q 005093 676 EK-GVETKVIVFPNDVHGIER 695 (715)
Q Consensus 676 ~~-g~~~~~~~~~~~~H~~~~ 695 (715)
.. ..++.+...+|-+|.+..
T Consensus 244 ~~~~~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 244 ATWQAPVVFRLQEGYDHSYYF 264 (283)
T ss_pred ccccccEEEEeecCCCcceee
Confidence 22 357888889999998653
No 133
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.23 E-value=2.2e-10 Score=103.62 Aligned_cols=241 Identities=18% Similarity=0.182 Sum_probs=136.6
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
....||..+.+..|... ++.+--+.+-|+... ....|...++.++++||.|+.+||||.++..........-.+
T Consensus 10 l~~~DG~~l~~~~~pA~-----~~~~g~~~va~a~Gv-~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~ 83 (281)
T COG4757 10 LPAPDGYSLPGQRFPAD-----GKASGRLVVAGATGV-GQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRY 83 (281)
T ss_pred cccCCCccCccccccCC-----CCCCCcEEecccCCc-chhHhHHHHHHhhccCceEEEEecccccCCCccccccCccch
Confidence 34457888888877432 233323334443333 245677888999999999999999996654333222222233
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeE-EEecCCcchhhhhccC-CCCC---Ccee
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVA-AAARNPLCNLALMVGT-TDIP---DWCY 611 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~-~v~~~~~~~~~~~~~~-~~~~---~~~~ 611 (715)
......|+.++++++.+.. ...+...+|||+||.+.-.+ .+++ ++.+ .+..++ ..+....+. .... -|..
T Consensus 84 ~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~-~~~~-k~~a~~vfG~g-agwsg~m~~~~~l~~~~l~~l 158 (281)
T COG4757 84 LDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLL-GQHP-KYAAFAVFGSG-AGWSGWMGLRERLGAVLLWNL 158 (281)
T ss_pred hhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccc-ccCc-ccceeeEeccc-cccccchhhhhcccceeeccc
Confidence 3334678999999998852 34678999999999977644 4456 3332 222221 111111100 0000 0000
Q ss_pred ee----ccCCCCCCCCCCC----CC--hhhHHHHHhc------Cch-----hhccCCCCcEEEEeeCCCCcCCchHHHHH
Q 005093 612 VE----SYGSKGKDSFTES----PS--VEDLTRFHSK------SPI-----SHISKVKTPTIFLLGAQDLRVPVSNGLQY 670 (715)
Q Consensus 612 ~~----~~~~~~~~~~~~~----~~--~~~~~~~~~~------sp~-----~~~~~i~~P~Lii~G~~D~~v~~~~~~~~ 670 (715)
.. .+.......+.+. |. ..++..+-++ +|. +....+.+|+..+...+|+.+|+.....+
T Consensus 159 v~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f 238 (281)
T COG4757 159 VGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAF 238 (281)
T ss_pred cccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHH
Confidence 00 0000000011111 11 2223333222 221 23456889999999999999999888888
Q ss_pred HHHHHHcCCcEEEEEeCCC----CccCCCCCchHHHHHHHHHHH
Q 005093 671 ARALREKGVETKVIVFPND----VHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 671 ~~~l~~~g~~~~~~~~~~~----~H~~~~~~~~~~~~~~i~~wl 710 (715)
....++ .+.++..++.. ||.-...+..+..++++++||
T Consensus 239 ~~~y~n--Apl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 239 ASFYRN--APLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHhhhc--CcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 777755 45666677664 786444444467899999997
No 134
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.20 E-value=4e-10 Score=133.23 Aligned_cols=234 Identities=15% Similarity=0.191 Sum_probs=131.1
Q ss_pred EEEEEEecCCCCC--CCCCcEEEEEcCCCCCCCCccchH-----HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 465 FEAIFVSSSHKKD--CSCDPLIVVLHGGPHSVSLSSYSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 465 l~~~l~~P~~~~~--~~~~P~vv~iHGg~~~~~~~~~~~-----~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
++.+-|.|...+. ....|.||++||.+.. ...|.. .+..|+++||.|+++|+. .+. ... ......
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~--~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~~~--~~~---~~~~~~ 120 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMS--ADMWDVTRDDGAVGILHRAGLDPWVIDFG-SPD--KVE---GGMERN 120 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCC--ccceecCCcccHHHHHHHCCCEEEEEcCC-CCC--hhH---cCccCC
Confidence 4445666653211 2345789999996544 334443 378899999999999963 211 110 000011
Q ss_pred -ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhcc-------------
Q 005093 538 -SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVG------------- 602 (715)
Q Consensus 538 -~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~------------- 602 (715)
...+..+.++++.+.+.. .+++.++||||||.+++.+++.+ +++++++++++...|+.....
T Consensus 121 l~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~ 197 (994)
T PRK07868 121 LADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAAD 197 (994)
T ss_pred HHHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccc
Confidence 011223344444444432 35799999999999998887644 558999988766654321100
Q ss_pred --------CCCCCCcee------------e-------eccCC-CCC------CCCC------CCCC---hhhHHHHHhcC
Q 005093 603 --------TTDIPDWCY------------V-------ESYGS-KGK------DSFT------ESPS---VEDLTRFHSKS 639 (715)
Q Consensus 603 --------~~~~~~~~~------------~-------~~~~~-~~~------~~~~------~~~~---~~~~~~~~~~s 639 (715)
....+.|.. . ..+.. ... ..+. ..+. .+....+...+
T Consensus 198 ~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n 277 (994)
T PRK07868 198 FMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHN 277 (994)
T ss_pred cchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhC
Confidence 000011100 0 00000 000 0000 0000 00111111111
Q ss_pred ch-----------hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEE-EEeCCCCccC--CCCCchHHHHHH
Q 005093 640 PI-----------SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV-IVFPNDVHGI--ERPQSDFESFLN 705 (715)
Q Consensus 640 p~-----------~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~-~~~~~~~H~~--~~~~~~~~~~~~ 705 (715)
.+ ..+.++++|+|+++|++|.++|++.+..+.+.+.. .++ .+++++||.. .......+.+..
T Consensus 278 ~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~----a~~~~~~~~~GH~g~~~g~~a~~~~wp~ 353 (994)
T PRK07868 278 RMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN----AEVYESLIRAGHFGLVVGSRAAQQTWPT 353 (994)
T ss_pred cccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEEeCCCCCEeeeechhhhhhhChH
Confidence 11 13678889999999999999999988888666532 444 5778999973 345566778999
Q ss_pred HHHHHHHh
Q 005093 706 IGLWFKKY 713 (715)
Q Consensus 706 i~~wl~~~ 713 (715)
+.+||.++
T Consensus 354 i~~wl~~~ 361 (994)
T PRK07868 354 VADWVKWL 361 (994)
T ss_pred HHHHHHHh
Confidence 99999875
No 135
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.19 E-value=1.1e-09 Score=101.54 Aligned_cols=118 Identities=25% Similarity=0.332 Sum_probs=90.6
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
-+....++.|. ..+.+|+|+|+||. ......|...++.++.+||+|++|++-.... .-+..+++
T Consensus 31 pPkpLlI~tP~---~~G~yPVilF~HG~--~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-----------p~~~~Ei~ 94 (307)
T PF07224_consen 31 PPKPLLIVTPS---EAGTYPVILFLHGF--NLYNSFYSQLLAHIASHGFIVVAPQLYTLFP-----------PDGQDEIK 94 (307)
T ss_pred CCCCeEEecCC---cCCCccEEEEeech--hhhhHHHHHHHHHHhhcCeEEEechhhcccC-----------CCchHHHH
Confidence 34556788887 78899999999993 3335577888999999999999999754211 12334578
Q ss_pred hHHHHHHHHHHc--------CCCCCceEEEEEeChhHHHHHHHHhhCC-C-ceeEEEecCCcch
Q 005093 543 DVLTAIDHVIDM--------GLANPSKVTVVGGSHGGFLTTHLIGQAP-D-KFVAAAARNPLCN 596 (715)
Q Consensus 543 d~~~~i~~l~~~--------~~~d~~~i~l~G~S~GG~~a~~~a~~~p-~-~~~~~v~~~~~~~ 596 (715)
+..+.++||.+. -..+.++++++|||.||..|..+|..+. + .|.++|.+.|+..
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 888999999764 1257789999999999999999988653 2 5888888888754
No 136
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.18 E-value=7e-10 Score=111.04 Aligned_cols=203 Identities=20% Similarity=0.256 Sum_probs=118.5
Q ss_pred HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 502 SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 502 ~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
.+..+.++||+|+++||.|- |..+.. .......+-|.+++.+.+... +.....+++++|+|.||..+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Gl---g~~y~~---~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGL---GTPYLN---GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCC---CCcccC---cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 55677899999999999984 333311 111112233444444443332 21234789999999999999887754
Q ss_pred C----CCc---eeEEEecCCcchhhhhccCCCCCCce-e--------eeccCC---------------------------
Q 005093 581 A----PDK---FVAAAARNPLCNLALMVGTTDIPDWC-Y--------VESYGS--------------------------- 617 (715)
Q Consensus 581 ~----p~~---~~~~v~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~--------------------------- 617 (715)
. |++ +.++++.+|+.++..+....+...+. + ...+..
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 3 554 78899988888765443322111000 0 000000
Q ss_pred ----CCCCCC--------CCCCC-h---hhHHHHHhcCc-hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC-C
Q 005093 618 ----KGKDSF--------TESPS-V---EDLTRFHSKSP-ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG-V 679 (715)
Q Consensus 618 ----~~~~~~--------~~~~~-~---~~~~~~~~~sp-~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g-~ 679 (715)
.....+ ..... . .....+...+. ...-..-+.|++|.||..|.++|+..+.++++++.++| .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 000000 00000 0 00011111111 00111225799999999999999999999999999999 7
Q ss_pred cEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 680 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 680 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+++++.+++.+|..... ......++||...|
T Consensus 252 ~V~~~~~~~~~H~~~~~----~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 252 DVEYVRYPGGGHLGAAF----ASAPDALAWLDDRF 282 (290)
T ss_pred CEEEEecCCCChhhhhh----cCcHHHHHHHHHHH
Confidence 99999999999965322 23456778887765
No 137
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=99.18 E-value=6.3e-09 Score=111.59 Aligned_cols=267 Identities=13% Similarity=0.080 Sum_probs=158.3
Q ss_pred eEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEE-EEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEK-EFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
...++||||++|||..+.++ +...++.++ .+|+... .+..... ..+.|++||+.|+|.........
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~-----------~~~~W~~d~~~~~y~~~~~~~~~ 195 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF-----------SSVSWSDDGKGFFYTRFDEDQRT 195 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES-----------EEEEECTTSSEEEEEECSTTTSS
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc-----------ceEEEeCCCCEEEEEEeCccccc
Confidence 46788999999999876653 445677777 5663322 1111111 34999999999999875542110
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE--eecCC-CCCCccceEEEecCCCCCc
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGI-PKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~--~l~~~-~~~~~~~~~~~spdg~~~~ 199 (715)
. ......+||.+.+.++... .+-.. ........+..|+||+.
T Consensus 196 -------------------------------~--~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~-- 240 (414)
T PF02897_consen 196 -------------------------------S--DSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRY-- 240 (414)
T ss_dssp ----------------------------------CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSE--
T ss_pred -------------------------------c--cCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccE--
Confidence 0 0002378999999887644 33111 12221446788999997
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC-----CCceecCCCCcc-ccceeEcCCCC
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-----LPVVNLTESISS-AFFPRFSPDGK 273 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lt~~~~~-~~~~~~spdg~ 273 (715)
|+....... ..+++|++++ .. ...+.+...... ....... |.
T Consensus 241 --l~i~~~~~~-----------~~s~v~~~d~-----------------~~~~~~~~~~~~l~~~~~~~~~~v~~~--~~ 288 (414)
T PF02897_consen 241 --LFISSSSGT-----------SESEVYLLDL-----------------DDGGSPDAKPKLLSPREDGVEYYVDHH--GD 288 (414)
T ss_dssp --EEEEEESSS-----------SEEEEEEEEC-----------------CCTTTSS-SEEEEEESSSS-EEEEEEE--TT
T ss_pred --EEEEEEccc-----------cCCeEEEEec-----------------cccCCCcCCcEEEeCCCCceEEEEEcc--CC
Confidence 666553221 1258999997 33 355666553333 2323332 77
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
.+++.++.. .....|+.+++...... .... .++....+.. +. .+...++.|++....
T Consensus 289 ~~yi~Tn~~-------a~~~~l~~~~l~~~~~~----~~~~--~l~~~~~~~~--------l~--~~~~~~~~Lvl~~~~ 345 (414)
T PF02897_consen 289 RLYILTNDD-------APNGRLVAVDLADPSPA----EWWT--VLIPEDEDVS--------LE--DVSLFKDYLVLSYRE 345 (414)
T ss_dssp EEEEEE-TT--------TT-EEEEEETTSTSGG----GEEE--EEE--SSSEE--------EE--EEEEETTEEEEEEEE
T ss_pred EEEEeeCCC-------CCCcEEEEecccccccc----ccee--EEcCCCCcee--------EE--EEEEECCEEEEEEEE
Confidence 788888764 34568999998875531 0000 1111101000 11 134456689998899
Q ss_pred CCeeEEEEEECC-CCcEEEecCCCC-CceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 354 GSSQVIISVNVS-SGELLRITPAES-NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 354 ~~~~~l~~~d~~-tg~~~~l~~~~~-~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
++..+|..+++. +.....+..... .+.......+++.+++..+++.+|+.+|.+++.+++
T Consensus 346 ~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~ 407 (414)
T PF02897_consen 346 NGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGE 407 (414)
T ss_dssp TTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTC
T ss_pred CCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCC
Confidence 999999999998 666666654432 222223345688999999999999999999998765
No 138
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.18 E-value=9.1e-10 Score=101.46 Aligned_cols=183 Identities=16% Similarity=0.164 Sum_probs=104.9
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHhCCc--EEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~la~~G~--~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|+|+||-..+..+.......+++++.+. .+.+++++. ...+..+.+..+++.. .++
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-------------------~p~~a~~~l~~~i~~~--~~~ 59 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-------------------FPEEAIAQLEQLIEEL--KPE 59 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-------------------CHHHHHHHHHHHHHhC--CCC
Confidence 38999995444333344455667777764 455555443 1445556666666653 344
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCc
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSP 640 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 640 (715)
.+.|+|.|+||+.|.+++.+++ +++ |+++|.+......... ++... ..+.+....-....+.....
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~----------iG~~~-~~~~~e~~~~~~~~~~~l~~ 125 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDY----------IGEQT-NPYTGESYELTEEHIEELKA 125 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHh----------hCccc-cCCCCccceechHhhhhcce
Confidence 5999999999999999998875 444 8888887654332110 00000 00000000000111111111
Q ss_pred hhhc-cCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 641 ISHI-SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 641 ~~~~-~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
+... ..-..++++++++.|++++...+...++. +..++.+|++|.|.. ..+.+..|++|+
T Consensus 126 l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~ggdH~f~~---f~~~l~~i~~f~ 186 (187)
T PF05728_consen 126 LEVPYPTNPERYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEEGGDHSFQD---FEEYLPQIIAFL 186 (187)
T ss_pred EeccccCCCccEEEEEecCCcccCHHHHHHHhcC-------ceEEEEeCCCCCCcc---HHHHHHHHHHhh
Confidence 1111 12235899999999999988665444332 344567888999874 346677888886
No 139
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.13 E-value=3.7e-10 Score=109.63 Aligned_cols=223 Identities=15% Similarity=0.199 Sum_probs=85.8
Q ss_pred CCcEEEEEcCCCCCCC-CccchHHHHHHHhCCcEEEEEcCCCC-CCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC--
Q 005093 480 CDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGS-LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG-- 555 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~-~~~~~~~~~~la~~G~~vi~~d~rG~-~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~-- 555 (715)
..-+||||-|-..... .+....+++.|...||.|+.+.++-+ .++|.... ..+++|+.++|+||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhcc
Confidence 4558999988332222 34455677788788999999998752 34554322 246899999999999973
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCC-----CceeEEEecCCcchhhhhccCCCC-CCce----ee----------ecc
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAP-----DKFVAAAARNPLCNLALMVGTTDI-PDWC----YV----------ESY 615 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~~~~~~~~~~~~~~~-~~~~----~~----------~~~ 615 (715)
....++|+|+|||-|..-++.++.... ..+.++|+.+|+.|-..+...... .... .. ..+
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 125689999999999999999887642 579999999999875432211000 0000 00 000
Q ss_pred CCCCCCCCC-CCCChhhHHHHHhcCc----------------hhhccCCCCcEEEEeeCCCCcCCchHH-HHHHHHHHHc
Q 005093 616 GSKGKDSFT-ESPSVEDLTRFHSKSP----------------ISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREK 677 (715)
Q Consensus 616 ~~~~~~~~~-~~~~~~~~~~~~~~sp----------------~~~~~~i~~P~Lii~G~~D~~v~~~~~-~~~~~~l~~~ 677 (715)
.......+. ..| ......+...+| ...+.++..|+|++.+++|+.||...- ..+.++++.+
T Consensus 184 p~~~~~~~~~~~P-iTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a 262 (303)
T PF08538_consen 184 PREFTPLVFYDTP-ITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAA 262 (303)
T ss_dssp ----GGTTT-SS----HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT------------------
T ss_pred eccccccccCCCc-ccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccc
Confidence 000000011 111 111111111111 134667889999999999999986543 4466666554
Q ss_pred CCc----EEEEEeCCCCccCCCCCc---hHHHHHHHHHHHH
Q 005093 678 GVE----TKVIVFPNDVHGIERPQS---DFESFLNIGLWFK 711 (715)
Q Consensus 678 g~~----~~~~~~~~~~H~~~~~~~---~~~~~~~i~~wl~ 711 (715)
-.+ ....++||+.|.+..+.. .....+++..||+
T Consensus 263 ~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 263 TNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccCC
Confidence 222 224589999999876443 2356666777764
No 140
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.13 E-value=3.5e-09 Score=103.13 Aligned_cols=260 Identities=12% Similarity=0.059 Sum_probs=145.9
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+......+...+||++|++||-.+.. .+..+|.+...+. .++...-.+.+..| ..+.||||.++|+-....
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD--~Taiiw~v~~d~~-~kl~~tlvgh~~~V------~yi~wSPDdryLlaCg~~ 290 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKD--STAIIWIVVYDVH-FKLKKTLVGHSQPV------SYIMWSPDDRYLLACGFD 290 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCC--ceEEEEEEecCcc-eeeeeeeecccCce------EEEEECCCCCeEEecCch
Confidence 33445678999999999999966443 4556676665444 22222112222233 799999999998765433
Q ss_pred CCCCCCCccCCCCCCCCCCcCC-CCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDC-NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
.. ...|....+..-...+.. ..-.....|-||.-.-+.+....+++.||+++.....-.+ -..-.+.+++.++||+
T Consensus 291 e~--~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~g-vr~~~v~dlait~Dgk 367 (519)
T KOG0293|consen 291 EV--LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEG-VRDPKVHDLAITYDGK 367 (519)
T ss_pred Hh--eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccc-cccceeEEEEEcCCCc
Confidence 22 122222222111111111 1112244577774233345556899999998876443311 1112467889999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
. ++.+. .+..|..++. ++...+.+..+...+.+...|.||+.+.
T Consensus 368 ~----vl~v~---------------~d~~i~l~~~-----------------e~~~dr~lise~~~its~~iS~d~k~~L 411 (519)
T KOG0293|consen 368 Y----VLLVT---------------VDKKIRLYNR-----------------EARVDRGLISEEQPITSFSISKDGKLAL 411 (519)
T ss_pred E----EEEEe---------------cccceeeech-----------------hhhhhhccccccCceeEEEEcCCCcEEE
Confidence 8 77665 2236777775 5555555666677788999999998554
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
+.-.+ ..++++|+......+--.+. ..|.| +-..+|..-+..++++.++++
T Consensus 412 -vnL~~----------qei~LWDl~e~~lv~kY~Gh--------------kq~~f---iIrSCFgg~~~~fiaSGSED~- 462 (519)
T KOG0293|consen 412 -VNLQD----------QEIHLWDLEENKLVRKYFGH--------------KQGHF---IIRSCFGGGNDKFIASGSEDS- 462 (519)
T ss_pred -EEccc----------CeeEEeecchhhHHHHhhcc--------------cccce---EEEeccCCCCcceEEecCCCc-
Confidence 33222 34888888742211100000 00000 112344433334666666554
Q ss_pred eEEEEEECCCCcEEEecCC
Q 005093 357 QVIISVNVSSGELLRITPA 375 (715)
Q Consensus 357 ~~l~~~d~~tg~~~~l~~~ 375 (715)
.+|.++..+|+......+
T Consensus 463 -kvyIWhr~sgkll~~LsG 480 (519)
T KOG0293|consen 463 -KVYIWHRISGKLLAVLSG 480 (519)
T ss_pred -eEEEEEccCCceeEeecC
Confidence 677778888876655443
No 141
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.12 E-value=1.9e-11 Score=119.77 Aligned_cols=174 Identities=17% Similarity=0.245 Sum_probs=105.0
Q ss_pred cEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEe
Q 005093 511 YSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAA 590 (715)
Q Consensus 511 ~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 590 (715)
|.|+++|.||.+. +... ...........|+.+.++.+++.- ..+++.++||||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~---S~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGY---SSPH-WDPDFPDYTTDDLAADLEALREAL--GIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTT---SSSC-CGSGSCTHCHHHHHHHHHHHHHHH--TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCC---CCCC-ccCCcccccHHHHHHHHHHHHHHh--CCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 6899999999543 3210 002233445889999999998873 345699999999999999999999999999999
Q ss_pred cCCcc--hh-h--hhccC-----C--C-CCC------------c----eeeecc-CCCC-----CCCCCCC--CCh----
Q 005093 591 RNPLC--NL-A--LMVGT-----T--D-IPD------------W----CYVESY-GSKG-----KDSFTES--PSV---- 629 (715)
Q Consensus 591 ~~~~~--~~-~--~~~~~-----~--~-~~~------------~----~~~~~~-~~~~-----~~~~~~~--~~~---- 629 (715)
.+++. .. . ..... . + ... + ...... .... ...+... ...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM 154 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh
Confidence 99851 00 0 00000 0 0 000 0 000000 0000 0000000 000
Q ss_pred -h-hHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC
Q 005093 630 -E-DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 694 (715)
Q Consensus 630 -~-~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 694 (715)
. ....+...++...+.++++|+|+++|++|..+|+..+..+.+.+. ..++++++++||...
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCSTHH
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCChHHH
Confidence 0 001112222334567899999999999999999888777554443 488999999999754
No 142
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.11 E-value=1.8e-10 Score=126.51 Aligned_cols=128 Identities=25% Similarity=0.291 Sum_probs=92.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhC-C-cEEEEEcCC-CCCCCchhhhhcCCCCCCccch
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-G-YSLLIVNYR-GSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~-G-~~vi~~d~r-G~~~~g~~~~~~~~~~~~~~~~ 541 (715)
+...++.|......++.|+||++|||++..+..... ....|+.+ + ++|+.++|| |..++........+.+. .+
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~---g~ 154 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNY---GL 154 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcch---hH
Confidence 444688897544467899999999998876554332 23444443 3 999999999 66555443322223333 37
Q ss_pred hhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCcch
Q 005093 542 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCN 596 (715)
Q Consensus 542 ~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~~ 596 (715)
.|+..+++|+.++ ...|+++|.|+|+|+||.++..++.. .+.+|+++|+.++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 8999999999875 24799999999999999999988775 2457999999887653
No 143
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.11 E-value=1.8e-08 Score=100.08 Aligned_cols=204 Identities=17% Similarity=0.175 Sum_probs=125.5
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
+.+||++|+++|+++.+. ......+.++.|||+++. |+|.-- .|+ -.++|.++|+
T Consensus 422 r~el~vididngnv~~id-kS~~~lItdf~~~~nsr~----iAYafP------~gy-----~tq~Iklydm--------- 476 (668)
T COG4946 422 RFELWVIDIDNGNVRLID-KSEYGLITDFDWHPNSRW----IAYAFP------EGY-----YTQSIKLYDM--------- 476 (668)
T ss_pred ceEEEEEEecCCCeeEec-ccccceeEEEEEcCCcee----EEEecC------cce-----eeeeEEEEec---------
Confidence 478999999999999884 233346789999999999 999741 222 2357889997
Q ss_pred hhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCcccc----------ceeEeeecCCCCCC---C
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT----------DSLHRIDWPTNGNF---S 307 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~----------~~l~~~~~~~~~~~---~ 307 (715)
.++.+-.+|.+.....+|+|.|||++|+|++.+.-.. ..+. ..-|++-|..+-.. +
T Consensus 477 --------~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~RsLdP---s~Drv~fnf~f~~vskPylv~L~~g~~sP~~q 545 (668)
T COG4946 477 --------DGGKIYDVTTPTAYDFSPAFDPDGRYLYFLSARSLDP---SNDRVIFNFSFQRVSKPYLVVLGRGYYSPFNQ 545 (668)
T ss_pred --------CCCeEEEecCCcccccCcccCCCCcEEEEEeccccCC---CCCeeEEEEEEeeeccceEEEecCCCCChhhc
Confidence 8889999999999999999999999999999885211 0111 11233333322211 1
Q ss_pred c----ccceeeeeeceec-CCCCCccccccCCCCCCccccCCCEEEEEeeeCC-----------eeEEEEEECCCCcEEE
Q 005093 308 S----LEKIVDVIPVVQC-AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS-----------SQVIISVNVSSGELLR 371 (715)
Q Consensus 308 l----t~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~-----------~~~l~~~d~~tg~~~~ 371 (715)
. +....+ +.+-.. ...+.||- =......+.-..+|+.++|+..-+| ...|-.+|++++++++
T Consensus 546 ~p~~~~~ea~e-~dle~ie~r~eP~pV-ee~dY~sI~~lk~~killfs~pi~Gefs~yy~gq~~kG~l~~ydletkk~~e 623 (668)
T COG4946 546 PPDEANSEAGE-VDLEGIEDRVEPFPV-EEGDYRSIAGLKNGKILLFSYPIHGEFSQYYWGQPEKGRLEKYDLETKKVEE 623 (668)
T ss_pred CchhcCccccc-eehhhhccccccccc-CccceeEeeecCCCeEEEEEeeccchhhhhhcCCCccceEEEEecchhhHHH
Confidence 1 000000 000000 00111210 0011123445668887877775332 2357788998888887
Q ss_pred ecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 372 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 372 l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+..+-. ...+|+|+..+++.. -..|+++++.
T Consensus 624 ~k~nvs---s~rlS~D~s~ilvk~-----d~kl~~f~ve 654 (668)
T COG4946 624 YKDNVS---SFRLSSDGSKILVKL-----DGKLRLFDVE 654 (668)
T ss_pred Hhcccc---eEEEcCCCCEEEEEe-----CCeEEEEecc
Confidence 776543 346788999888733 2347777754
No 144
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.10 E-value=1.8e-07 Score=97.04 Aligned_cols=277 Identities=14% Similarity=0.053 Sum_probs=137.5
Q ss_pred cccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCcccc
Q 005093 11 ANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVH 90 (715)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (715)
.+.+...|..+++++.+ +...+...+ ..+.....++||||++|+...... +.-..|.+...|....+-..+...
T Consensus 7 ~~~~~~~I~~~~~~~~g-~l~~~~~~~---~~~~~~~l~~spd~~~lyv~~~~~-~~i~~~~~~~~g~l~~~~~~~~~~- 80 (330)
T PRK11028 7 ASPESQQIHVWNLNHEG-ALTLLQVVD---VPGQVQPMVISPDKRHLYVGVRPE-FRVLSYRIADDGALTFAAESPLPG- 80 (330)
T ss_pred EcCCCCCEEEEEECCCC-ceeeeeEEe---cCCCCccEEECCCCCEEEEEECCC-CcEEEEEECCCCceEEeeeecCCC-
Confidence 34455667777775433 212111111 114567789999999886554422 322334444334433222221110
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
....+.++|||++|+..... ...|.+++++
T Consensus 81 -------~p~~i~~~~~g~~l~v~~~~-------------------------------------------~~~v~v~~~~ 110 (330)
T PRK11028 81 -------SPTHISTDHQGRFLFSASYN-------------------------------------------ANCVSVSPLD 110 (330)
T ss_pred -------CceEEEECCCCCEEEEEEcC-------------------------------------------CCeEEEEEEC
Confidence 12689999999988665321 1567888875
Q ss_pred C-CceE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCC
Q 005093 171 S-GEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 248 (715)
Q Consensus 171 ~-g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (715)
+ |... .+.............++|||+. ++... . ....|+++|+.
T Consensus 111 ~~g~~~~~~~~~~~~~~~~~~~~~p~g~~----l~v~~-~-------------~~~~v~v~d~~---------------- 156 (330)
T PRK11028 111 KDGIPVAPIQIIEGLEGCHSANIDPDNRT----LWVPC-L-------------KEDRIRLFTLS---------------- 156 (330)
T ss_pred CCCCCCCceeeccCCCcccEeEeCCCCCE----EEEee-C-------------CCCEEEEEEEC----------------
Confidence 3 3221 1100122223456789999986 54433 2 22368888872
Q ss_pred CCCCcee-----cC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecC
Q 005093 249 EDLPVVN-----LT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA 322 (715)
Q Consensus 249 ~~~~~~~-----lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~ 322 (715)
..+.... .. ......+...|+|||++|+...... ..|.+++++.+.. .+. .+..+...+
T Consensus 157 ~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~----------~~v~v~~~~~~~~-~~~----~~~~~~~~p 221 (330)
T PRK11028 157 DDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELN----------SSVDVWQLKDPHG-EIE----CVQTLDMMP 221 (330)
T ss_pred CCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCC----------CEEEEEEEeCCCC-CEE----EEEEEecCC
Confidence 2222211 11 1122356789999999776554332 3577777763211 110 011111111
Q ss_pred CCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC--CCCCceeEEEeecCCEEEEEEe
Q 005093 323 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP--AESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 323 ~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~--~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
.. +++. .....+.++|||+++|......+.-.+|.++.+++..+.+.. .........++++|++|+++..
T Consensus 222 ~~--~~~~--~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~ 293 (330)
T PRK11028 222 AD--FSDT--RWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQ 293 (330)
T ss_pred Cc--CCCC--ccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEc
Confidence 11 1100 011235688999977775333444556666655443332211 1111123578889988887653
No 145
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.10 E-value=6.8e-10 Score=114.97 Aligned_cols=190 Identities=18% Similarity=0.203 Sum_probs=99.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCC------chhh-hhc-------------CCCCCCc
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGF------GEEA-LQS-------------LPGKVGS 538 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~------g~~~-~~~-------------~~~~~~~ 538 (715)
+++|+|||-||.+.. ...|...+..||++||+|+++++|..... ...- ... .......
T Consensus 98 ~~~PvvIFSHGlgg~--R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGS--RTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT----TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcc--hhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 789999999996555 44688899999999999999999943211 1110 000 0000000
Q ss_pred -----------cchhhHHHHHHHHHH--c------------------CCCCCceEEEEEeChhHHHHHHHHhhCCCceeE
Q 005093 539 -----------QDVNDVLTAIDHVID--M------------------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVA 587 (715)
Q Consensus 539 -----------~~~~d~~~~i~~l~~--~------------------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 587 (715)
.-..|+..+++.|.+ . +.+|.++|+++|||+||..++.++.+ ..+|++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~-d~r~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQ-DTRFKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhh-ccCcce
Confidence 113456666666653 1 23567899999999999999988776 478999
Q ss_pred EEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHH
Q 005093 588 AAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG 667 (715)
Q Consensus 588 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~ 667 (715)
+|++.|+.- |..+ .....++.|+|+|+.+. .. -....
T Consensus 255 ~I~LD~W~~------------------------------Pl~~-----------~~~~~i~~P~L~InSe~-f~-~~~~~ 291 (379)
T PF03403_consen 255 GILLDPWMF------------------------------PLGD-----------EIYSKIPQPLLFINSES-FQ-WWENI 291 (379)
T ss_dssp EEEES---T------------------------------TS-G-----------GGGGG--S-EEEEEETT-T---HHHH
T ss_pred EEEeCCccc------------------------------CCCc-----------ccccCCCCCEEEEECcc-cC-ChhhH
Confidence 999888531 1000 00134678999998764 22 11222
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCccCC------CC------------Cc----hHHHHHHHHHHHHHhcC
Q 005093 668 LQYARALREKGVETKVIVFPNDVHGIE------RP------------QS----DFESFLNIGLWFKKYCK 715 (715)
Q Consensus 668 ~~~~~~l~~~g~~~~~~~~~~~~H~~~------~~------------~~----~~~~~~~i~~wl~~~l~ 715 (715)
..+ +.+...+....++.+.|..|.-. .+ .. .....+.+++||++||+
T Consensus 292 ~~~-~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 292 FRM-KKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp HHH-HTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHH-HHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 222 22334456678899999999522 11 01 12345568899999874
No 146
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.06 E-value=3.1e-09 Score=99.12 Aligned_cols=116 Identities=22% Similarity=0.356 Sum_probs=75.9
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
++..++-.|. ....|++++.|||+.+ .-.|...+..+. ..-..|+++|+|| ||.+-.+....--......
T Consensus 61 t~n~Y~t~~~----~t~gpil~l~HG~G~S--~LSfA~~a~el~s~~~~r~~a~DlRg---HGeTk~~~e~dlS~eT~~K 131 (343)
T KOG2564|consen 61 TFNVYLTLPS----ATEGPILLLLHGGGSS--ALSFAIFASELKSKIRCRCLALDLRG---HGETKVENEDDLSLETMSK 131 (343)
T ss_pred eEEEEEecCC----CCCccEEEEeecCccc--chhHHHHHHHHHhhcceeEEEeeccc---cCccccCChhhcCHHHHHH
Confidence 6776666663 5678999999998877 345666666553 4456789999999 6654322111111112356
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecC
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARN 592 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~ 592 (715)
|+.+.+.++... .+.+|.|+||||||.++.+.|... |. +.+++.+.
T Consensus 132 D~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viD 179 (343)
T KOG2564|consen 132 DFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVID 179 (343)
T ss_pred HHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEE
Confidence 777777766543 357899999999999998877642 43 45555443
No 147
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.06 E-value=1.1e-08 Score=86.91 Aligned_cols=185 Identities=16% Similarity=0.190 Sum_probs=117.1
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCC--CCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGS--LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~--~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
.-+||+.||.+..+.+......+..|+.+|+.|..++++-. -..|.. -+......--...+.++..|.+. .+
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r----kPp~~~~t~~~~~~~~~aql~~~--l~ 87 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR----KPPPGSGTLNPEYIVAIAQLRAG--LA 87 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC----CCcCccccCCHHHHHHHHHHHhc--cc
Confidence 34678889988888777888888999999999999996521 111100 01111111134556666677666 35
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecC-CcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHh
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN-PLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHS 637 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (715)
..++++-|+||||-++.+++...-..+.++++.+ |+.. -+. | +..
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp------------------pGK---------P-----e~~-- 133 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP------------------PGK---------P-----EQL-- 133 (213)
T ss_pred CCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC------------------CCC---------c-----ccc--
Confidence 6789999999999999988765433466666543 3210 010 1 111
Q ss_pred cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC---------CCchHHHHHHHHH
Q 005093 638 KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---------PQSDFESFLNIGL 708 (715)
Q Consensus 638 ~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---------~~~~~~~~~~i~~ 708 (715)
-..++..+++|+||.+|+.|+.-..++. .... ...+++++.++++.|.+-- ........+++..
T Consensus 134 --Rt~HL~gl~tPtli~qGtrD~fGtr~~V---a~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~ 206 (213)
T COG3571 134 --RTEHLTGLKTPTLITQGTRDEFGTRDEV---AGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAG 206 (213)
T ss_pred --hhhhccCCCCCeEEeecccccccCHHHH---Hhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHH
Confidence 1245678899999999999998755443 1111 2357899999999996542 1222334456777
Q ss_pred HHHH
Q 005093 709 WFKK 712 (715)
Q Consensus 709 wl~~ 712 (715)
|.++
T Consensus 207 ~~~~ 210 (213)
T COG3571 207 WARR 210 (213)
T ss_pred HHhh
Confidence 7654
No 148
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.05 E-value=5.7e-08 Score=99.30 Aligned_cols=204 Identities=13% Similarity=0.105 Sum_probs=116.7
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
.....|+|||+.++.....+ + .+..++ .+++........... ..+.|+|||+.|++....
T Consensus 75 ~~~~~~~~~g~~l~~~~~~~-~--~l~~~d~~~~~~~~~~~~~~~~----------~~~~~~~dg~~l~~~~~~------ 135 (300)
T TIGR03866 75 PELFALHPNGKILYIANEDD-N--LVTVIDIETRKVLAEIPVGVEP----------EGMAVSPDGKIVVNTSET------ 135 (300)
T ss_pred ccEEEECCCCCEEEEEcCCC-C--eEEEEECCCCeEEeEeeCCCCc----------ceEEECCCCCEEEEEecC------
Confidence 45678999999775543322 2 344444 333322222221222 579999999998875332
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
...++.+|.++++.... .........+.|+|||+. ++
T Consensus 136 -------------------------------------~~~~~~~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l~ 172 (300)
T TIGR03866 136 -------------------------------------TNMAHFIDTKTYEIVDN--VLVDQRPRFAEFTADGKE----LW 172 (300)
T ss_pred -------------------------------------CCeEEEEeCCCCeEEEE--EEcCCCccEEEECCCCCE----EE
Confidence 13456678777665432 112223456899999997 76
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC-------CccccceeEcCCCCeE
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES-------ISSAFFPRFSPDGKFL 275 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~-------~~~~~~~~~spdg~~l 275 (715)
+... ....|+.+|+ ++++. ..++.. .......+|||||+.+
T Consensus 173 ~~~~--------------~~~~v~i~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~ 221 (300)
T TIGR03866 173 VSSE--------------IGGTVSVIDV-----------------ATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA 221 (300)
T ss_pred EEcC--------------CCCEEEEEEc-----------------CcceeeeeeeecccccccccCCccceEECCCCCEE
Confidence 6542 1236888886 44432 222211 1123457899999986
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCC
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 355 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~ 355 (715)
+...... ..|.++|+.+++..... .. . ..+..+.|+|||+.|+.....
T Consensus 222 ~~~~~~~----------~~i~v~d~~~~~~~~~~----------~~---~-------~~~~~~~~~~~g~~l~~~~~~-- 269 (300)
T TIGR03866 222 FVALGPA----------NRVAVVDAKTYEVLDYL----------LV---G-------QRVWQLAFTPDEKYLLTTNGV-- 269 (300)
T ss_pred EEEcCCC----------CeEEEEECCCCcEEEEE----------Ee---C-------CCcceEEECCCCCEEEEEcCC--
Confidence 5544322 25888888764432110 00 0 124567899999977654332
Q ss_pred eeEEEEEECCCCcE-EEec
Q 005093 356 SQVIISVNVSSGEL-LRIT 373 (715)
Q Consensus 356 ~~~l~~~d~~tg~~-~~l~ 373 (715)
...|..+|+.+++. .++.
T Consensus 270 ~~~i~v~d~~~~~~~~~~~ 288 (300)
T TIGR03866 270 SNDVSVIDVAALKVIKSIK 288 (300)
T ss_pred CCeEEEEECCCCcEEEEEE
Confidence 34688889988885 4443
No 149
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.03 E-value=3.8e-08 Score=93.33 Aligned_cols=106 Identities=21% Similarity=0.212 Sum_probs=79.6
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
.+.+..+||-+||.|++ ...|..+...|.+.|+.++.++|+| +|.... + .-....-.+-...+..|.++-.
T Consensus 31 ~gs~~gTVv~~hGsPGS--H~DFkYi~~~l~~~~iR~I~iN~PG---f~~t~~---~-~~~~~~n~er~~~~~~ll~~l~ 101 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGS--HNDFKYIRPPLDEAGIRFIGINYPG---FGFTPG---Y-PDQQYTNEERQNFVNALLDELG 101 (297)
T ss_pred CCCCceeEEEecCCCCC--ccchhhhhhHHHHcCeEEEEeCCCC---CCCCCC---C-cccccChHHHHHHHHHHHHHcC
Confidence 34556689999998887 5577778899999999999999999 443321 1 1111224566677777777655
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
++ +++.++|||.|+-.|+.++..+| ..++++++|+
T Consensus 102 i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 102 IK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred CC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 65 88999999999999999999886 4577777764
No 150
>COG0627 Predicted esterase [General function prediction only]
Probab=99.03 E-value=2e-09 Score=107.34 Aligned_cols=227 Identities=17% Similarity=0.171 Sum_probs=133.3
Q ss_pred CCCCCcEEEEEcCCCCCC-CCccchHHHHHHHhCCcEEEEEcCC--------------CC-CCCchhhhhcCCCCCCccc
Q 005093 477 DCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYR--------------GS-LGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~-~~~~~~~~~~~la~~G~~vi~~d~r--------------G~-~~~g~~~~~~~~~~~~~~~ 540 (715)
.+++.|+++++||-.+.. ........-....+.|.+++++|-. |. .++-.++.+..... +...
T Consensus 50 m~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~-~~~q 128 (316)
T COG0627 50 MGRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWAS-GPYQ 128 (316)
T ss_pred cCCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCcccc-Cccc
Confidence 457889999999944332 1112233444567888888888532 11 11111111111000 1122
Q ss_pred hhhHH-HHHH-HHHHcCCCCC--ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccC
Q 005093 541 VNDVL-TAID-HVIDMGLANP--SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 616 (715)
Q Consensus 541 ~~d~~-~~i~-~l~~~~~~d~--~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (715)
.++++ .-+- .+.+...++. ++.+|+||||||+-|+.+|++||++|+.+...+|+++........ ......++
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~----~~~~~~~g 204 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPT----LAMGDPWG 204 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccccccc----cccccccc
Confidence 33332 2222 3333333454 389999999999999999999999999999999998765332221 00001111
Q ss_pred CCCCCCCCCCCChhhHHHHHhcCchhhccC--------------CCCcEEEEeeCCCCcCC--chHHHHHHHHHHHcCCc
Q 005093 617 SKGKDSFTESPSVEDLTRFHSKSPISHISK--------------VKTPTIFLLGAQDLRVP--VSNGLQYARALREKGVE 680 (715)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~--------------i~~P~Lii~G~~D~~v~--~~~~~~~~~~l~~~g~~ 680 (715)
......+.+... ...+..++|...+.+ ...++++-+|..|.... ....+.+.+++.+.|.+
T Consensus 205 ~~~~~~~~G~~~---~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~ 281 (316)
T COG0627 205 GKAFNAMLGPDS---DPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIP 281 (316)
T ss_pred CccHHHhcCCCc---cccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCC
Confidence 111111222111 112334444443332 44678888999998764 33467899999999999
Q ss_pred EEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 681 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 681 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
..+...++.+|.+.... ..+..++.|+...|
T Consensus 282 ~~~~~~~~G~Hsw~~w~---~~l~~~~~~~a~~l 312 (316)
T COG0627 282 NGVRDQPGGDHSWYFWA---SQLADHLPWLAGAL 312 (316)
T ss_pred ceeeeCCCCCcCHHHHH---HHHHHHHHHHHHHh
Confidence 99999988999875433 56778888887765
No 151
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.03 E-value=2.3e-07 Score=96.38 Aligned_cols=287 Identities=16% Similarity=0.142 Sum_probs=152.2
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCC--CCCCeEEEEecC-CccEEEEecC-cccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE--NESPIQFELWSQ-SQLEKEFHVP-QTVH 90 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~-~~~~ 90 (715)
...|+.+.++....+...+.. .....+.+..++||++++|+.+.+.. .+.-..|.+... |..+.+-... .+.
T Consensus 12 ~~gI~~~~~d~~~g~l~~~~~---~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~- 87 (345)
T PF10282_consen 12 GGGIYVFRFDEETGTLTLVQT---VAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGS- 87 (345)
T ss_dssp STEEEEEEEETTTTEEEEEEE---EEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSS-
T ss_pred CCcEEEEEEcCCCCCceEeee---ecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCC-
Confidence 357888878666654333322 12235577788899998887665542 233345555533 6666655443 121
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
..-.+..+|||++|+...-. ...+.+++++
T Consensus 88 -------~p~~i~~~~~g~~l~vany~-------------------------------------------~g~v~v~~l~ 117 (345)
T PF10282_consen 88 -------SPCHIAVDPDGRFLYVANYG-------------------------------------------GGSVSVFPLD 117 (345)
T ss_dssp -------CEEEEEECTTSSEEEEEETT-------------------------------------------TTEEEEEEEC
T ss_pred -------CcEEEEEecCCCEEEEEEcc-------------------------------------------CCeEEEEEcc
Confidence 11478899999988764221 1456666665
Q ss_pred C-CceEeec--------C----CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 171 S-GEVQAVK--------G----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 171 ~-g~~~~l~--------~----~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
. |...... + .........+.++|||+. + |+... ....|+.++++
T Consensus 118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~----v-~v~dl-------------G~D~v~~~~~~----- 174 (345)
T PF10282_consen 118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRF----V-YVPDL-------------GADRVYVYDID----- 174 (345)
T ss_dssp TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSE----E-EEEET-------------TTTEEEEEEE------
T ss_pred CCcccceeeeecccCCCCCcccccccccceeEEECCCCCE----E-EEEec-------------CCCEEEEEEEe-----
Confidence 4 4433321 0 011223457889999996 4 55432 22367777762
Q ss_pred hhhhhhhccCCCCCCcee---cC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccccee
Q 005093 238 ASELELKESSSEDLPVVN---LT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 313 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~---lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~ 313 (715)
..+++... +. ......+...|+|||++++...+.. ..|.++++..... .++. -
T Consensus 175 ----------~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s----------~~v~v~~~~~~~g-~~~~--~ 231 (345)
T PF10282_consen 175 ----------DDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELS----------NTVSVFDYDPSDG-SLTE--I 231 (345)
T ss_dssp ----------TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTT----------TEEEEEEEETTTT-EEEE--E
T ss_pred ----------CCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCC----------CcEEEEeecccCC-ceeE--E
Confidence 02222222 22 2233478899999999876665443 3577777662111 1110 0
Q ss_pred eeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC--CCCC-ceeEEEeecCCE
Q 005093 314 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP--AESN-FSWSLLTLDGDN 390 (715)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~--~~~~-~~~~~~s~~~~~ 390 (715)
..+.......... .....+..+|||++||++....+...+|.+|..+|+.+.+.. ..+. -....++++|++
T Consensus 232 ~~~~~~~~~~~~~------~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~ 305 (345)
T PF10282_consen 232 QTISTLPEGFTGE------NAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRY 305 (345)
T ss_dssp EEEESCETTSCSS------SSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSE
T ss_pred EEeeecccccccc------CCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCE
Confidence 1111111100000 023456789999988887666666678888777888776532 1121 233467889888
Q ss_pred EEEEEeCCCCCCeEEEEe
Q 005093 391 IIAVSSSPVDVPQVKYGY 408 (715)
Q Consensus 391 l~~~~~~~~~p~~l~~~~ 408 (715)
|+......+. -.+|.++
T Consensus 306 l~Va~~~s~~-v~vf~~d 322 (345)
T PF10282_consen 306 LYVANQDSNT-VSVFDID 322 (345)
T ss_dssp EEEEETTTTE-EEEEEEE
T ss_pred EEEEecCCCe-EEEEEEe
Confidence 8876544433 2334444
No 152
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.02 E-value=2.1e-07 Score=94.11 Aligned_cols=126 Identities=16% Similarity=0.143 Sum_probs=74.9
Q ss_pred cceeEcC-CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecC--CCCCccccccCCCCCCcc
Q 005093 264 FFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA--EGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 264 ~~~~~sp-dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~ 340 (715)
..|.+++ ||+ .+|.+... .|+++|+.+.+...+. ...+.... +++-.|+ +...+++
T Consensus 197 ~rP~~~~~dg~-~~~vs~eG-----------~V~~id~~~~~~~~~~-----~~~~~~~~~~~~~wrP~----g~q~ia~ 255 (352)
T TIGR02658 197 NHPAYSNKSGR-LVWPTYTG-----------KIFQIDLSSGDAKFLP-----AIEAFTEAEKADGWRPG----GWQQVAY 255 (352)
T ss_pred cCCceEcCCCc-EEEEecCC-----------eEEEEecCCCcceecc-----eeeeccccccccccCCC----cceeEEE
Confidence 5567788 665 66777652 4999998776553221 11111110 1111222 3334789
Q ss_pred ccCCCEEEEEeee-------CCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCC-EEEEEEeCCCCCCeEEEEeeccc
Q 005093 341 LSDGCTMLLSSIW-------GSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGD-NIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 341 ~~dg~~l~~~~~~-------~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~-~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
++||+++|+.... .+..+++.+|++++++..-...........+++|++ .|+.+.... ..|.++|..++
T Consensus 256 ~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s---~~VsViD~~t~ 332 (352)
T TIGR02658 256 HRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGD---KTLYIFDAETG 332 (352)
T ss_pred cCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCC---CcEEEEECcCC
Confidence 9999988885531 233689999999988776444333234468999998 555444332 33778887655
Q ss_pred C
Q 005093 413 A 413 (715)
Q Consensus 413 ~ 413 (715)
+
T Consensus 333 k 333 (352)
T TIGR02658 333 K 333 (352)
T ss_pred e
Confidence 3
No 153
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.02 E-value=6.9e-08 Score=100.29 Aligned_cols=226 Identities=15% Similarity=0.218 Sum_probs=124.9
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecC----ccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVP----QTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.....+.+|||++|+. .+..++.-.++.+...|......+.. .+....--...-...+.++|||++++. .+.
T Consensus 88 ~p~~i~~~~~g~~l~v-any~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v-~dl-- 163 (345)
T PF10282_consen 88 SPCHIAVDPDGRFLYV-ANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV-PDL-- 163 (345)
T ss_dssp CEEEEEECTTSSEEEE-EETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE-EET--
T ss_pred CcEEEEEecCCCEEEE-EEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE-Eec--
Confidence 3467888999998865 45433555566666556555543211 010000000001247889999998854 332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc--eEeec--CCCCCCccceEEEecCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE--VQAVK--GIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~--~~~l~--~~~~~~~~~~~~~spdg 195 (715)
| ...|++++++.+. +.... ..+......++.|+|||
T Consensus 164 ---------------------------------G-------~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg 203 (345)
T PF10282_consen 164 ---------------------------------G-------ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDG 203 (345)
T ss_dssp ---------------------------------T-------TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTS
T ss_pred ---------------------------------C-------CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCc
Confidence 1 2567777776544 43311 13445567789999999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec---C---C---CCccccce
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL---T---E---SISSAFFP 266 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---t---~---~~~~~~~~ 266 (715)
+. +|...+. .+.|.+++++ ...+..+.+ . . ........
T Consensus 204 ~~-----~Yv~~e~-------------s~~v~v~~~~---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~i 250 (345)
T PF10282_consen 204 KY-----AYVVNEL-------------SNTVSVFDYD---------------PSDGSLTEIQTISTLPEGFTGENAPAEI 250 (345)
T ss_dssp SE-----EEEEETT-------------TTEEEEEEEE---------------TTTTEEEEEEEEESCETTSCSSSSEEEE
T ss_pred CE-----EEEecCC-------------CCcEEEEeec---------------ccCCceeEEEEeeeccccccccCCceeE
Confidence 84 5555332 2356666651 012322111 1 1 11146678
Q ss_pred eEcCCCCeEEEEecCCCCCCCCccccceeEeeecC--CCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCC
Q 005093 267 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 344 (715)
Q Consensus 267 ~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~--~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg 344 (715)
.+||||++| |++++. ...|.+++++ ++..+. +..+.+. +. .+..+.++|||
T Consensus 251 ~ispdg~~l-yvsnr~---------~~sI~vf~~d~~~g~l~~--------~~~~~~~--G~-------~Pr~~~~s~~g 303 (345)
T PF10282_consen 251 AISPDGRFL-YVSNRG---------SNSISVFDLDPATGTLTL--------VQTVPTG--GK-------FPRHFAFSPDG 303 (345)
T ss_dssp EE-TTSSEE-EEEECT---------TTEEEEEEECTTTTTEEE--------EEEEEES--SS-------SEEEEEE-TTS
T ss_pred EEecCCCEE-EEEecc---------CCEEEEEEEecCCCceEE--------EEEEeCC--CC-------CccEEEEeCCC
Confidence 899999976 566663 2356666663 332211 1111111 11 23566789999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 345 CTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 345 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
++|++.....+...+|.+|.++|..+.+.
T Consensus 304 ~~l~Va~~~s~~v~vf~~d~~tG~l~~~~ 332 (345)
T PF10282_consen 304 RYLYVANQDSNTVSVFDIDPDTGKLTPVG 332 (345)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCCCeEEEEEEeCCCCcEEEec
Confidence 98888777778889999999999988765
No 154
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.98 E-value=9.8e-08 Score=96.06 Aligned_cols=267 Identities=16% Similarity=0.172 Sum_probs=144.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
+.+....|+|+|+.|++.... +.-.+|.+ .+++.......... .+..+.|+|+++.|+..+.....
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~--g~i~i~~~-~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~~~~i-- 75 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGD--GTIKVWDL-ETGELLRTLKGHTG---------PVRDVAASADGTYLASGSSDKTI-- 75 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecC--cEEEEEEe-eCCCcEEEEecCCc---------ceeEEEECCCCCEEEEEcCCCeE--
Confidence 668999999999999887653 22223332 33332222221111 12589999999888887653321
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCcc-CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKR-QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
..+....................+.|.++ +..+.... ...|.+|++.+++..... ......+..+.|+|+++.
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~---- 149 (289)
T cd00200 76 RLWDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTL-RGHTDWVNSVAFSPDGTF---- 149 (289)
T ss_pred EEEEcCcccceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEe-ccCCCcEEEEEEcCcCCE----
Confidence 12221111111111111112223444444 33333333 578999999866654431 223335778999999664
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-CceecCCCCccccceeEcCCCCeEEEEec
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
++.+. .+..|..+|+ ..+ ....+......+....|+|+|+.|++.+.
T Consensus 150 -l~~~~--------------~~~~i~i~d~-----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 197 (289)
T cd00200 150 -VASSS--------------QDGTIKLWDL-----------------RTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS 197 (289)
T ss_pred -EEEEc--------------CCCcEEEEEc-----------------cccccceeEecCccccceEEECCCcCEEEEecC
Confidence 44431 1236788886 333 33444444556888999999998888776
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
+ ..|.++|+.++........ ....+..+.|++++. +++.....+ .|+
T Consensus 198 ~-----------~~i~i~d~~~~~~~~~~~~-------------------~~~~i~~~~~~~~~~-~~~~~~~~~--~i~ 244 (289)
T cd00200 198 D-----------GTIKLWDLSTGKCLGTLRG-------------------HENGVNSVAFSPDGY-LLASGSEDG--TIR 244 (289)
T ss_pred C-----------CcEEEEECCCCceecchhh-------------------cCCceEEEEEcCCCc-EEEEEcCCC--cEE
Confidence 3 2478888876443211100 001245667888865 545444333 566
Q ss_pred EEECCCCcEEEecC-CCCCceeEEEeecCCEEEEE
Q 005093 361 SVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 361 ~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~ 394 (715)
.+|+.+++...... ....+....+++++..++..
T Consensus 245 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 279 (289)
T cd00200 245 VWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASG 279 (289)
T ss_pred EEEcCCceeEEEccccCCcEEEEEECCCCCEEEEe
Confidence 66776665544433 22233334566665555443
No 155
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.98 E-value=7.4e-09 Score=94.49 Aligned_cols=153 Identities=16% Similarity=0.139 Sum_probs=89.9
Q ss_pred EEEEcCCCCCCCCccchH-HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceE
Q 005093 484 IVVLHGGPHSVSLSSYSK-SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 562 (715)
Q Consensus 484 vv~iHGg~~~~~~~~~~~-~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i 562 (715)
|+++||...+.. ..|.. +.+.|... +.|-.++.. .-++.+.+..|.+.-....+.+
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~~-~~V~~~~~~---------------------~P~~~~W~~~l~~~i~~~~~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLENS-VRVEQPDWD---------------------NPDLDEWVQALDQAIDAIDEPT 57 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTTS-EEEEEC--T---------------------S--HHHHHHHHHHCCHC-TTTE
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCCC-eEEeccccC---------------------CCCHHHHHHHHHHHHhhcCCCe
Confidence 688999555443 44554 44556555 677666541 1133444444444321123569
Q ss_pred EEEEeChhHHHHHHHH-hhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCch
Q 005093 563 TVVGGSHGGFLTTHLI-GQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI 641 (715)
Q Consensus 563 ~l~G~S~GG~~a~~~a-~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 641 (715)
.++|||+|+..++.++ .....+++++++++|+....... ..+ . .....+.
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~---~~~------~--------------------~~~f~~~ 108 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP---FPP------E--------------------LDGFTPL 108 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC---CTC------G--------------------GCCCTTS
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc---hhh------h--------------------ccccccC
Confidence 9999999999999999 66778999999999974310000 000 0 0000000
Q ss_pred hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC
Q 005093 642 SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 694 (715)
Q Consensus 642 ~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 694 (715)
....+..|.+++.+++|+.||++.+..+++++. .+++.++++||...
T Consensus 109 -p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~-----a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 109 -PRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG-----AELIILGGGGHFNA 155 (171)
T ss_dssp -HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT------EEEEETS-TTSSG
T ss_pred -cccccCCCeEEEEcCCCCccCHHHHHHHHHHcC-----CCeEECCCCCCccc
Confidence 011233567999999999999999999999984 67999999999543
No 156
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.98 E-value=1.2e-08 Score=95.81 Aligned_cols=154 Identities=18% Similarity=0.317 Sum_probs=96.6
Q ss_pred ceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCC
Q 005093 101 GISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI 180 (715)
Q Consensus 101 ~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~ 180 (715)
.+.|+|+|++|++......... ++.+. +...||.++..+.....+. .
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~------------------------------~ks~~--~~~~l~~~~~~~~~~~~i~-l 56 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKS------------------------------GKSYY--GEFELFYLNEKNIPVESIE-L 56 (194)
T ss_pred EEEecccCCEEEEEEEEeeccC------------------------------cceEE--eeEEEEEEecCCCccceee-c
Confidence 6889999999999876321110 11111 2378999988777666662 2
Q ss_pred CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCC
Q 005093 181 PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI 260 (715)
Q Consensus 181 ~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~ 260 (715)
.....+.+++|+|+|++ ++..... .+..|..+|+ ++.....+. .
T Consensus 57 ~~~~~I~~~~WsP~g~~----favi~g~-------------~~~~v~lyd~-----------------~~~~i~~~~--~ 100 (194)
T PF08662_consen 57 KKEGPIHDVAWSPNGNE----FAVIYGS-------------MPAKVTLYDV-----------------KGKKIFSFG--T 100 (194)
T ss_pred cCCCceEEEEECcCCCE----EEEEEcc-------------CCcccEEEcC-----------------cccEeEeec--C
Confidence 33345889999999999 8776421 1225777775 433433443 2
Q ss_pred ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcc
Q 005093 261 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 261 ~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 340 (715)
.......|||+|+.|+..+..+ ...+|.++|..+.+........ ....+.|
T Consensus 101 ~~~n~i~wsP~G~~l~~~g~~n--------~~G~l~~wd~~~~~~i~~~~~~---------------------~~t~~~W 151 (194)
T PF08662_consen 101 QPRNTISWSPDGRFLVLAGFGN--------LNGDLEFWDVRKKKKISTFEHS---------------------DATDVEW 151 (194)
T ss_pred CCceEEEECCCCCEEEEEEccC--------CCcEEEEEECCCCEEeeccccC---------------------cEEEEEE
Confidence 3456789999999999887543 1235888887753321111000 2345679
Q ss_pred ccCCCEEEEEee
Q 005093 341 LSDGCTMLLSSI 352 (715)
Q Consensus 341 ~~dg~~l~~~~~ 352 (715)
+|||++++..+.
T Consensus 152 sPdGr~~~ta~t 163 (194)
T PF08662_consen 152 SPDGRYLATATT 163 (194)
T ss_pred cCCCCEEEEEEe
Confidence 999998876654
No 157
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.97 E-value=1.6e-09 Score=110.65 Aligned_cols=132 Identities=23% Similarity=0.212 Sum_probs=91.7
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHhCC-cEEEEEcCCCCCCCchhhhhcC---C
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVG-YSLLIVNYRGSLGFGEEALQSL---P 533 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la~~G-~~vi~~d~rG~~~~g~~~~~~~---~ 533 (715)
+.|.+.| .++.|. .+.++.|+|||||||++..+...- ...-..|+++| ++|+.+|||... +|--....+ .
T Consensus 76 sEDCL~L--NIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~ 150 (491)
T COG2272 76 SEDCLYL--NIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGA-LGFLDLSSLDTED 150 (491)
T ss_pred cccceeE--EeeccC--CCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCccccc-ceeeehhhccccc
Confidence 3355444 588887 356779999999999877644321 23456788888 999999999421 221111111 1
Q ss_pred CCCCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcch
Q 005093 534 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCN 596 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~~ 596 (715)
......-+.|++.+++|+.++ ..-|+++|.|+|+|+||+.++.+++. |. +|+.+|+.||.+.
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 111123478999999999886 34799999999999999999888764 54 7888888888664
No 158
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.97 E-value=1.7e-08 Score=91.24 Aligned_cols=188 Identities=20% Similarity=0.241 Sum_probs=121.0
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCC-----CCCC-CchhhhhcC--CCCCC--ccchhhHHHHHHHH
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYR-----GSLG-FGEEALQSL--PGKVG--SQDVNDVLTAIDHV 551 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~r-----G~~~-~g~~~~~~~--~~~~~--~~~~~d~~~~i~~l 551 (715)
-+||++||-+.+ ...|...+..+......-++|.-+ ..++ .+..|.+.. ..+.. ........+.+..|
T Consensus 4 atIi~LHglGDs--g~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDS--GSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCC--CccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 479999995544 345555555566667777777421 1111 111221111 00111 11122333444455
Q ss_pred HHc---CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCC
Q 005093 552 IDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS 628 (715)
Q Consensus 552 ~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (715)
+++ ..++.+||++-|.|+||.++++++..++....+++..+++..... ...+.| ..
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~----~~~~~~-----------------~~ 140 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS----IGLPGW-----------------LP 140 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch----hhccCC-----------------cc
Confidence 443 247889999999999999999999988766666766666542110 000000 00
Q ss_pred hhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHH
Q 005093 629 VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 708 (715)
Q Consensus 629 ~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 708 (715)
. .+ .+|++..||+.|++||..-.....+.|+..+..++++.|++.+|... .+.++.+..
T Consensus 141 ~---------------~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~-----~~e~~~~~~ 199 (206)
T KOG2112|consen 141 G---------------VN-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS-----PQELDDLKS 199 (206)
T ss_pred c---------------cC-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc-----HHHHHHHHH
Confidence 0 00 57999999999999999999999999999999999999999999775 355778888
Q ss_pred HHHHh
Q 005093 709 WFKKY 713 (715)
Q Consensus 709 wl~~~ 713 (715)
|+++.
T Consensus 200 ~~~~l 204 (206)
T KOG2112|consen 200 WIKTL 204 (206)
T ss_pred HHHHh
Confidence 98763
No 159
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.96 E-value=2.1e-08 Score=100.38 Aligned_cols=206 Identities=17% Similarity=0.264 Sum_probs=106.3
Q ss_pred ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec
Q 005093 99 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK 178 (715)
Q Consensus 99 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~ 178 (715)
|....|.+||++|+|.++.. +..+||++||++++.++||
T Consensus 38 F~~~~ft~dG~kllF~s~~d-----------------------------------------g~~nly~lDL~t~~i~QLT 76 (386)
T PF14583_consen 38 FYQNCFTDDGRKLLFASDFD-----------------------------------------GNRNLYLLDLATGEITQLT 76 (386)
T ss_dssp TTS--B-TTS-EEEEEE-TT-----------------------------------------SS-EEEEEETTT-EEEE--
T ss_pred ecCCCcCCCCCEEEEEeccC-----------------------------------------CCcceEEEEcccCEEEECc
Confidence 36788999999999987643 3488999999999999995
Q ss_pred CCCCCC-ccceEEEecCCCCCccEEEEEeecCccce------------------eee-eeeec-----------------
Q 005093 179 GIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRK------------------LGI-KYCYN----------------- 221 (715)
Q Consensus 179 ~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~------------------~g~-~~~~~----------------- 221 (715)
.... ......+||+++. ++|..+...-++ .|+ .+..+
T Consensus 77 --dg~g~~~~g~~~s~~~~~----~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~ 150 (386)
T PF14583_consen 77 --DGPGDNTFGGFLSPDDRA----LYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWK 150 (386)
T ss_dssp ---SS-B-TTT-EE-TTSSE----EEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG--
T ss_pred --cCCCCCccceEEecCCCe----EEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhcc
Confidence 4321 1224678999988 888653211000 110 00001
Q ss_pred ---------------CCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCC-eEEEEecCCCCC
Q 005093 222 ---------------RPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGK-FLVFLSAKSSVD 285 (715)
Q Consensus 222 ---------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~-~l~~~~~~~~~~ 285 (715)
..+.|+.+| ..+|+.+.+.........+.|||..- .|+|.-.
T Consensus 151 ~l~~~~~f~e~~~a~p~~~i~~id-----------------l~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHE----- 208 (386)
T PF14583_consen 151 PLTKWKGFREFYEARPHCRIFTID-----------------LKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHE----- 208 (386)
T ss_dssp ---SHHHHHHHHHC---EEEEEEE-----------------TTT--EEEEEEESS-EEEEEEETTEEEEEEEEE------
T ss_pred CccccHHHHHHHhhCCCceEEEEE-----------------CCCCceeEEEecCccccCcccCCCCCCEEEEecc-----
Confidence 112344444 37888888888888889999999554 4555543
Q ss_pred CCCcccc-ceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee-CC-eeEEEEE
Q 005093 286 SGAHSAT-DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GS-SQVIISV 362 (715)
Q Consensus 286 ~g~~~~~-~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-~~-~~~l~~~ 362 (715)
|++..- .+||+++.+++..+.+..... .+ ...---|++||+.|++.... ++ ..-|+.+
T Consensus 209 -Gpw~~Vd~RiW~i~~dg~~~~~v~~~~~----------~e--------~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~ 269 (386)
T PF14583_consen 209 -GPWDLVDQRIWTINTDGSNVKKVHRRME----------GE--------SVGHEFWVPDGSTIWYDSYTPGGQDFWIAGY 269 (386)
T ss_dssp -S-TTTSS-SEEEEETTS---EESS---T----------TE--------EEEEEEE-TTSS-EEEEEEETTT--EEEEEE
T ss_pred -CCcceeceEEEEEEcCCCcceeeecCCC----------Cc--------ccccccccCCCCEEEEEeecCCCCceEEEee
Confidence 334443 489999988876654432210 00 11122499999999987663 33 4469999
Q ss_pred ECCCCcEEEecCCCCCceeEEEeecCCEEEE
Q 005093 363 NVSSGELLRITPAESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 363 d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~ 393 (715)
|++|++.+.+..... .+....++|+..++-
T Consensus 270 d~~t~~~~~~~~~p~-~~H~~ss~Dg~L~vG 299 (386)
T PF14583_consen 270 DPDTGERRRLMEMPW-CSHFMSSPDGKLFVG 299 (386)
T ss_dssp -TTT--EEEEEEE-S-EEEEEE-TTSSEEEE
T ss_pred CCCCCCceEEEeCCc-eeeeEEcCCCCEEEe
Confidence 999999887755433 122334456665443
No 160
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.96 E-value=2e-08 Score=97.74 Aligned_cols=224 Identities=17% Similarity=0.140 Sum_probs=128.4
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
.-.+.|.++++||--++ ...|......|+ ..|-.|+++|.|. +|.+...... ......+|+..+++......
T Consensus 48 ~~~~~Pp~i~lHGl~GS--~~Nw~sv~k~Ls~~l~~~v~~vd~Rn---HG~Sp~~~~h--~~~~ma~dv~~Fi~~v~~~~ 120 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGS--KENWRSVAKNLSRKLGRDVYAVDVRN---HGSSPKITVH--NYEAMAEDVKLFIDGVGGST 120 (315)
T ss_pred ccCCCCceEEecccccC--CCCHHHHHHHhcccccCceEEEeccc---CCCCcccccc--CHHHHHHHHHHHHHHccccc
Confidence 45678999999995444 467777777664 4567899999998 6665432211 12233566666666665432
Q ss_pred CCCCceEEEEEeChhH-HHHHHHHhhCCCceeEEEec--CCc-chh-----h---hhccCCCCC-------Cc-------
Q 005093 556 LANPSKVTVVGGSHGG-FLTTHLIGQAPDKFVAAAAR--NPL-CNL-----A---LMVGTTDIP-------DW------- 609 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG-~~a~~~a~~~p~~~~~~v~~--~~~-~~~-----~---~~~~~~~~~-------~~------- 609 (715)
-..++.|+|||||| .+++..+...|+++..+|+. +|. +.- . ......+.. .+
T Consensus 121 --~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 121 --RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred --ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 24679999999999 66777777788877665543 331 100 0 000000000 00
Q ss_pred --------ee-eeccC--CCCCCCCCCCCCh---hhHHHHHhcCchhhc--cCCCCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 610 --------CY-VESYG--SKGKDSFTESPSV---EDLTRFHSKSPISHI--SKVKTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 610 --------~~-~~~~~--~~~~~~~~~~~~~---~~~~~~~~~sp~~~~--~~i~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
.+ ...+. .......+..+.. +....+...+.-..+ .....|+|+++|.++..++.++-.++.+.
T Consensus 199 ~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~ 278 (315)
T KOG2382|consen 199 VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKI 278 (315)
T ss_pred HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHh
Confidence 00 00000 0000000000000 011111112222222 45568999999999999987766555555
Q ss_pred HHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 674 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+. .++++.++++||+...+. .+++.+.|.+|+.++.
T Consensus 279 fp----~~e~~~ld~aGHwVh~E~-P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 279 FP----NVEVHELDEAGHWVHLEK-PEEFIESISEFLEEPE 314 (315)
T ss_pred cc----chheeecccCCceeecCC-HHHHHHHHHHHhcccC
Confidence 44 389999999999887554 4588999999887653
No 161
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.96 E-value=8e-10 Score=123.22 Aligned_cols=129 Identities=22% Similarity=0.228 Sum_probs=85.9
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
|...|+.|.......++|++|+||||++..+.. ........++.++++||.++||... +|--.........+...+.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~Gfl~~~~~~~~~gN~Gl~ 187 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FGFLSLGDLDAPSGNYGLL 187 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HHH-BSSSTTSHBSTHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cccccccccccCchhhhhh
Confidence 455699998765555899999999998877655 3334456678999999999999421 1111000000001333488
Q ss_pred hHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCc
Q 005093 543 DVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPL 594 (715)
Q Consensus 543 d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~ 594 (715)
|...|++|+.++ ..-|+++|.|+|+|+||..+..++..- ..+|+.+|+.|+.
T Consensus 188 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 188 DQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 999999999986 346999999999999999988777652 3589999999984
No 162
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.95 E-value=1.3e-08 Score=97.70 Aligned_cols=196 Identities=15% Similarity=0.075 Sum_probs=117.2
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCC----cEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G----~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
.+....+|+|.++.+..++|+++++||-.+.... .....++.|.+.| -.++.+|+--....... .. .. .
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g-~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~----~~-~n-~ 152 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSG-RIPRILDSLIAAGEIPPAILVGIDYIDVKKRREE----LH-CN-E 152 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcC-ChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHH----hc-cc-H
Confidence 3456678999999999999999999994333211 2233455555544 56788886532111111 11 00 0
Q ss_pred cchhhHH-HHHHHHHHcCC--CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeecc
Q 005093 539 QDVNDVL-TAIDHVIDMGL--ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 615 (715)
Q Consensus 539 ~~~~d~~-~~i~~l~~~~~--~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (715)
.-...+. +.+-++.+... -+.+.-+|+|.|+||.++++++.++|++|..+++.||.+........
T Consensus 153 ~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~------------ 220 (299)
T COG2382 153 AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQ------------ 220 (299)
T ss_pred HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccc------------
Confidence 0122222 23334444422 35566789999999999999999999999999999997753311100
Q ss_pred CCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC
Q 005093 616 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 694 (715)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 694 (715)
+..+ .....+-.........-++...++.+.+. ...+++++.|++.+.++.+..|+| ||.+.
T Consensus 221 -----------~~~~---~~~~l~~~~a~~~~~~~~l~~g~~~~~~~--~pNr~L~~~L~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 221 -----------PQGE---VAESLKILHAIGTDERIVLTTGGEEGDFL--RPNRALAAQLEKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred -----------cccc---hhhhhhhhhccCccceEEeecCCcccccc--chhHHHHHHHHhcCCcceeeecCC-CCchh
Confidence 0001 11111111112222233344444444444 445788999999999999999998 99775
No 163
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.94 E-value=7.7e-09 Score=105.94 Aligned_cols=231 Identities=19% Similarity=0.264 Sum_probs=141.4
Q ss_pred CCCcEEEEEcCCCCCCCCc--c--chHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCC--------CCCccchhhHHH
Q 005093 479 SCDPLIVVLHGGPHSVSLS--S--YSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG--------KVGSQDVNDVLT 546 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~--~--~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~--------~~~~~~~~d~~~ 546 (715)
+++|+|++.||--.++... . -...+-.|+++||.|..-+.|| ..|++.-....+. .|.+....|+-+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG-n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA 149 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG-NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPA 149 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC-cccchhhcccCCcCCcceeecchhhhhhcCHHH
Confidence 8899999999943332111 1 1224456899999999999999 4455443221111 122334679999
Q ss_pred HHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcchhhhh---------------------cc
Q 005093 547 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLALM---------------------VG 602 (715)
Q Consensus 547 ~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~~~~~~---------------------~~ 602 (715)
.|+++.+. ...+++..+|||.|+.....++...|+ +++.+++++|+.-+... .+
T Consensus 150 ~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg 227 (403)
T KOG2624|consen 150 MIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFG 227 (403)
T ss_pred HHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcC
Confidence 99999987 357899999999999999988887765 68889999987633200 00
Q ss_pred CCCC-CC-c---------eeee-------------ccCCCCC--------CCCCCCCC---h------------------
Q 005093 603 TTDI-PD-W---------CYVE-------------SYGSKGK--------DSFTESPS---V------------------ 629 (715)
Q Consensus 603 ~~~~-~~-~---------~~~~-------------~~~~~~~--------~~~~~~~~---~------------------ 629 (715)
.... +. + +... ..+.... ..+...|. .
T Consensus 228 ~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~y 307 (403)
T KOG2624|consen 228 RKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKY 307 (403)
T ss_pred CccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCcccc
Confidence 0000 00 0 0000 0000000 00000000 0
Q ss_pred -----hhHHHHHh-cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc--CCCCCchHH
Q 005093 630 -----EDLTRFHS-KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG--IERPQSDFE 701 (715)
Q Consensus 630 -----~~~~~~~~-~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~--~~~~~~~~~ 701 (715)
.+...+.. ..|...+.++.+|+.+.+|..|.++.++....+...+..... ...+.+++-.|. +........
T Consensus 308 D~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~ 386 (403)
T KOG2624|consen 308 DYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEE 386 (403)
T ss_pred CCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHH
Confidence 11222222 234556788899999999999999999988877777765433 233336777885 233455678
Q ss_pred HHHHHHHHHHHh
Q 005093 702 SFLNIGLWFKKY 713 (715)
Q Consensus 702 ~~~~i~~wl~~~ 713 (715)
+++.|++.+++.
T Consensus 387 vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 387 VYDPVIERLRLF 398 (403)
T ss_pred HHHHHHHHHHhh
Confidence 899999988754
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.93 E-value=2.2e-08 Score=100.63 Aligned_cols=203 Identities=17% Similarity=0.238 Sum_probs=116.9
Q ss_pred EEEEe-cCCCCCCCCCcEEEEEcCCCCCCCCccc--hH---HHHHHHhCCcEEEEEcCCCCC--CCchhhhhcCCCCCCc
Q 005093 467 AIFVS-SSHKKDCSCDPLIVVLHGGPHSVSLSSY--SK---SLAFLSSVGYSLLIVNYRGSL--GFGEEALQSLPGKVGS 538 (715)
Q Consensus 467 ~~l~~-P~~~~~~~~~P~vv~iHGg~~~~~~~~~--~~---~~~~la~~G~~vi~~d~rG~~--~~g~~~~~~~~~~~~~ 538 (715)
-|++. |...+ .+..|+|||+|||++....... .. ....| . ...++++||..+. .+ +....
T Consensus 108 ~Wlvk~P~~~~-pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~---------~~~yP 175 (374)
T PF10340_consen 108 YWLVKAPNRFK-PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEH---------GHKYP 175 (374)
T ss_pred EEEEeCCcccC-CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccC---------CCcCc
Confidence 46776 66432 3345999999999876533211 11 11222 2 5599999998754 11 12233
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC--C---CceeEEEecCCcchhhhhccCCCCCCce---
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--P---DKFVAAAARNPLCNLALMVGTTDIPDWC--- 610 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--p---~~~~~~v~~~~~~~~~~~~~~~~~~~~~--- 610 (715)
.++.++.+..++|.+.. ..++|.|+|.|+||.+++.++... + ..-+.+|++||++++...... +...+.
T Consensus 176 tQL~qlv~~Y~~Lv~~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~-~~~~~~~n~ 252 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQ-EGSSYHDNE 252 (374)
T ss_pred hHHHHHHHHHHHHHhcc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCC-CCccccccc
Confidence 45889999999999542 247899999999999999876421 1 235899999999987521110 000000
Q ss_pred eeeccCCC----CCCCCCCC---------------CChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHH
Q 005093 611 YVESYGSK----GKDSFTES---------------PSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA 671 (715)
Q Consensus 611 ~~~~~~~~----~~~~~~~~---------------~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~ 671 (715)
..+..... ....+.+. +..-+.+.|... +. ++-++++.|+++-.. ++..++.
T Consensus 253 ~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I-----~~--~~~vfVi~Ge~Evfr--ddI~~~~ 323 (374)
T PF10340_consen 253 KRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI-----LK--KYSVFVIYGEDEVFR--DDILEWA 323 (374)
T ss_pred cccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh-----cc--CCcEEEEECCccccH--HHHHHHH
Confidence 00000000 00000000 000001111111 11 257999999988655 7788999
Q ss_pred HHHHHcCC-----cEEEEEeCCCCccC
Q 005093 672 RALREKGV-----ETKVIVFPNDVHGI 693 (715)
Q Consensus 672 ~~l~~~g~-----~~~~~~~~~~~H~~ 693 (715)
+.+...+. ..++.+-+++.|.-
T Consensus 324 ~~~~~~~~~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 324 KKLNDVKPNKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred HHHhhcCccccCCcceEEEecCCcccc
Confidence 99986543 36777788888853
No 165
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.93 E-value=2.1e-07 Score=93.96 Aligned_cols=157 Identities=18% Similarity=0.156 Sum_probs=87.0
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecC---CCC
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLT---ESI 260 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt---~~~ 260 (715)
-+..++|||||++ ++.++ .+..++++|= .+|+.. .|. .+.
T Consensus 192 FV~~VRysPDG~~----Fat~g---------------sDgki~iyDG-----------------ktge~vg~l~~~~aHk 235 (603)
T KOG0318|consen 192 FVNCVRYSPDGSR----FATAG---------------SDGKIYIYDG-----------------KTGEKVGELEDSDAHK 235 (603)
T ss_pred ceeeEEECCCCCe----EEEec---------------CCccEEEEcC-----------------CCccEEEEecCCCCcc
Confidence 3567899999998 76655 2347888883 444433 333 346
Q ss_pred ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-CC---------------------cccceeeeeec
Q 005093 261 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FS---------------------SLEKIVDVIPV 318 (715)
Q Consensus 261 ~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~~---------------------lt~~~~~~~~~ 318 (715)
+.+..++||||+++++-.+.+.+ +.++|..+.+. +. ++-.....+.+
T Consensus 236 GsIfalsWsPDs~~~~T~SaDkt-----------~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ 304 (603)
T KOG0318|consen 236 GSIFALSWSPDSTQFLTVSADKT-----------IKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINY 304 (603)
T ss_pred ccEEEEEECCCCceEEEecCCce-----------EEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEE
Confidence 67999999999999998887643 23333333221 00 00001111111
Q ss_pred eecCCCC---CccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecC-CEEE
Q 005093 319 VQCAEGD---CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDG-DNII 392 (715)
Q Consensus 319 ~~~~~~~---~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~-~~l~ 392 (715)
+...... .+. .+..++..+.-++|+++| ++.+.+| +|..++..+|..-++......-....+...+ +.++
T Consensus 305 ln~~d~~~~~~i~-GHnK~ITaLtv~~d~~~i-~SgsyDG--~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~ 378 (603)
T KOG0318|consen 305 LNPSDPSVLKVIS-GHNKSITALTVSPDGKTI-YSGSYDG--HINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELF 378 (603)
T ss_pred ecccCCChhheec-ccccceeEEEEcCCCCEE-EeeccCc--eEEEEecCCccccccccccccceEEEEeecCCCcEE
Confidence 1111111 011 133355667778899755 4444443 7888888888888776443322333444444 4443
No 166
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=98.91 E-value=1.7e-08 Score=97.57 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=75.1
Q ss_pred cCceEEEEEccCCc--eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 160 RQPSLFVININSGE--VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 160 ~~~~l~~~~~~~g~--~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
...++|+|+..-.+ ..++ +.....+.++.||||++. |+-.+- ..-..||..+
T Consensus 344 Dd~tlflW~p~~~kkpi~rm--tgHq~lVn~V~fSPd~r~----IASaSF-------------DkSVkLW~g~------- 397 (480)
T KOG0271|consen 344 DDFTLFLWNPFKSKKPITRM--TGHQALVNHVSFSPDGRY----IASASF-------------DKSVKLWDGR------- 397 (480)
T ss_pred CCceEEEecccccccchhhh--hchhhheeeEEECCCccE----EEEeec-------------ccceeeeeCC-------
Confidence 34789999874322 2334 233345778999999998 887652 1212444443
Q ss_pred hhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeeee
Q 005093 238 ASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVI 316 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~ 316 (715)
.++-...+-.+-..+..++||.|.+-|+-.+.+. .|-++++.+++.. .|....
T Consensus 398 -----------tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDs-----------TLKvw~V~tkKl~~DLpGh~---- 451 (480)
T KOG0271|consen 398 -----------TGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDS-----------TLKVWDVRTKKLKQDLPGHA---- 451 (480)
T ss_pred -----------CcchhhhhhhccceeEEEEeccCccEEEEcCCCc-----------eEEEEEeeeeeecccCCCCC----
Confidence 3334444555566789999999998776555443 4778888776642 222222
Q ss_pred eceecCCCCCccccccCCCCCCccccCCCEEE
Q 005093 317 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 348 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~ 348 (715)
..+..+.|+|||..+.
T Consensus 452 ----------------DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 452 ----------------DEVFAVDWSPDGQRVA 467 (480)
T ss_pred ----------------ceEEEEEecCCCceee
Confidence 2345678999998653
No 167
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.91 E-value=3.8e-08 Score=97.19 Aligned_cols=235 Identities=16% Similarity=0.132 Sum_probs=129.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhh--h---cCC-----C
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL--Q---SLP-----G 534 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~--~---~~~-----~ 534 (715)
.+-.++.|+.- ..+.+|++|.+.|.+..........++..|+++|+..+.+..+- ||..-. + .+. .
T Consensus 77 a~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Py---yg~RkP~~Q~~s~l~~VsDl~ 152 (348)
T PF09752_consen 77 ARFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPY---YGQRKPKDQRRSSLRNVSDLF 152 (348)
T ss_pred eEEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEeccc---ccccChhHhhcccccchhHHH
Confidence 34457778754 34668999999995544333333445777888899999988654 332210 0 000 0
Q ss_pred CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-c-CCCCCCceee
Q 005093 535 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-G-TTDIPDWCYV 612 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-~-~~~~~~~~~~ 612 (715)
..+...+.++...++|+.++++ .+++|.|.||||.+|.++++..|..+..+-++++...-..+. + ......|...
T Consensus 153 ~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L 229 (348)
T PF09752_consen 153 VMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDAL 229 (348)
T ss_pred HHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHH
Confidence 0123346788889999999963 689999999999999999999988766655555432211000 0 0111112110
Q ss_pred ecc-CC--------------CCCCCCCCCCChhhHHHH----HhcCchhhccCCCCc-----EEEEeeCCCCcCCchHHH
Q 005093 613 ESY-GS--------------KGKDSFTESPSVEDLTRF----HSKSPISHISKVKTP-----TIFLLGAQDLRVPVSNGL 668 (715)
Q Consensus 613 ~~~-~~--------------~~~~~~~~~~~~~~~~~~----~~~sp~~~~~~i~~P-----~Lii~G~~D~~v~~~~~~ 668 (715)
..- .. ...............+.. ..++-..++.+..+| +.++.+++|..||..+..
T Consensus 230 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~ 309 (348)
T PF09752_consen 230 EKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVL 309 (348)
T ss_pred HHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcc
Confidence 000 00 000000000000111111 111222334444433 788999999999877666
Q ss_pred HHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 669 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 669 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.+.+.. ..+++..+++ ||.-..-.....+.+.|.+=|+
T Consensus 310 ~Lq~~W----PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 310 SLQEIW----PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hHHHhC----CCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 544443 3466777877 9974443334455566666543
No 168
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.91 E-value=1.1e-06 Score=91.20 Aligned_cols=242 Identities=12% Similarity=0.105 Sum_probs=124.6
Q ss_pred eEEEEecCCCCCCeEEEEecCCccEEEEecC--ccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC
Q 005093 56 KLLVVRNPENESPIQFELWSQSQLEKEFHVP--QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 133 (715)
Q Consensus 56 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 133 (715)
..+|+.+..++.-.+|.+..+|+.+.+-... ... ..+.+||||++|+.....
T Consensus 2 ~~~y~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~~----------~~l~~spd~~~lyv~~~~---------------- 55 (330)
T PRK11028 2 QIVYIASPESQQIHVWNLNHEGALTLLQVVDVPGQV----------QPMVISPDKRHLYVGVRP---------------- 55 (330)
T ss_pred eEEEEEcCCCCCEEEEEECCCCceeeeeEEecCCCC----------ccEEECCCCCEEEEEECC----------------
Confidence 3467776543444455554345443332222 222 688999999988664321
Q ss_pred CCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccc
Q 005093 134 SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETR 212 (715)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~ 212 (715)
...|.+++++ +|+.+.+...+.......+.++|||+. |+.+. ..
T Consensus 56 ---------------------------~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~----l~v~~-~~--- 100 (330)
T PRK11028 56 ---------------------------EFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRF----LFSAS-YN--- 100 (330)
T ss_pred ---------------------------CCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCE----EEEEE-cC---
Confidence 1346666664 455443311111223567899999996 54443 11
Q ss_pred eeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eec--CCCCccccceeEcCCCCeEEEEecCCCCCCCCc
Q 005093 213 KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAH 289 (715)
Q Consensus 213 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l--t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~ 289 (715)
...|.+++++ ..+.. +.+ ...........++|||++|+......
T Consensus 101 ----------~~~v~v~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~------- 147 (330)
T PRK11028 101 ----------ANCVSVSPLD----------------KDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKE------- 147 (330)
T ss_pred ----------CCeEEEEEEC----------------CCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCC-------
Confidence 2357777761 12211 111 11122345578999999886555432
Q ss_pred cccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 005093 290 SATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 369 (715)
Q Consensus 290 ~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~ 369 (715)
..|+++|+.+.+. +.........+ .. + .++..+.|+|||+++|......+...+|.++..+++.
T Consensus 148 ---~~v~v~d~~~~g~--l~~~~~~~~~~---~~-g-------~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~ 211 (330)
T PRK11028 148 ---DRIRLFTLSDDGH--LVAQEPAEVTT---VE-G-------AGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEI 211 (330)
T ss_pred ---CEEEEEEECCCCc--ccccCCCceec---CC-C-------CCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCE
Confidence 3588899876332 11000000000 00 0 1345678999999777765545555666666545554
Q ss_pred EEec---C--CC--C-Cc-eeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 370 LRIT---P--AE--S-NF-SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 370 ~~l~---~--~~--~-~~-~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+.+. . .. + .. ....++++++.++..... ...|.++++.
T Consensus 212 ~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~---~~~I~v~~i~ 258 (330)
T PRK11028 212 ECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRT---ASLISVFSVS 258 (330)
T ss_pred EEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCC---CCeEEEEEEe
Confidence 3321 1 10 0 01 124577888877765322 2346566654
No 169
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.90 E-value=7.1e-08 Score=105.39 Aligned_cols=169 Identities=10% Similarity=0.063 Sum_probs=110.2
Q ss_pred ccceEEeeCCCCceEEEEecC----CCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 43 TGASAVVPSPSGSKLLVVRNP----ENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
..+..+++||||+++||+... ++...++|....++..++++.... . ..++|||||++|+|+++..
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~~-~----------t~PsWspDG~~lw~v~dg~ 418 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGHS-L----------TRPSWSLDADAVWVVVDGN 418 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCCC-C----------CCceECCCCCceEEEecCc
Confidence 457899999999999999842 113457777776666677664322 3 7999999999999986532
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
.. .+... .....+++++++++++.++ . .. ..+..++|||||++
T Consensus 419 ~~--------------------------~~v~~------~~~~gql~~~~vd~ge~~~-~-~~--g~Issl~wSpDG~R- 461 (591)
T PRK13616 419 TV--------------------------VRVIR------DPATGQLARTPVDASAVAS-R-VP--GPISELQLSRDGVR- 461 (591)
T ss_pred ce--------------------------EEEec------cCCCceEEEEeccCchhhh-c-cC--CCcCeEEECCCCCE-
Confidence 10 00000 0023689999999888764 1 12 34889999999999
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEE---EecccccchhhhhhhhccCCCCCCcee------cCCCCcc-ccceeE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYA---VRVSLYKSEASELELKESSSEDLPVVN------LTESISS-AFFPRF 268 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------lt~~~~~-~~~~~~ 268 (715)
|+|... .+||+ +.. .+|+ .. |+..... ..++.|
T Consensus 462 ---iA~i~~----------------g~v~Va~Vvr~-----------------~~G~-~~l~~~~~l~~~l~~~~~~l~W 504 (591)
T PRK13616 462 ---AAMIIG----------------GKVYLAVVEQT-----------------EDGQ-YALTNPREVGPGLGDTAVSLDW 504 (591)
T ss_pred ---EEEEEC----------------CEEEEEEEEeC-----------------CCCc-eeecccEEeecccCCccccceE
Confidence 999861 15665 332 3444 33 3333333 577999
Q ss_pred cCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC
Q 005093 269 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 306 (715)
Q Consensus 269 spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 306 (715)
..|++ |+..... ....+|.+++++....
T Consensus 505 ~~~~~-L~V~~~~---------~~~~v~~v~vDG~~~~ 532 (591)
T PRK13616 505 RTGDS-LVVGRSD---------PEHPVWYVNLDGSNSD 532 (591)
T ss_pred ecCCE-EEEEecC---------CCCceEEEecCCcccc
Confidence 99998 5544332 1245899998875543
No 170
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.89 E-value=1.5e-06 Score=87.98 Aligned_cols=211 Identities=16% Similarity=0.144 Sum_probs=116.0
Q ss_pred CCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCC--------ccEEEEecCccccccccCCCcccceeecCCC
Q 005093 37 PFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS--------QLEKEFHVPQTVHGSVYADGWFEGISWNSDE 108 (715)
Q Consensus 37 ~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg 108 (715)
+|+.-.|.+...+|++||++|+-+-+.. ++-...-+|+.| ..+++-.+..... .+|.-..=|.|+
T Consensus 98 ef~v~aG~I~Di~Wd~ds~RI~avGEGr-erfg~~F~~DSG~SvGei~GhSr~ins~~~Kps------RPfRi~T~sdDn 170 (603)
T KOG0318|consen 98 EFQVLAGPIKDISWDFDSKRIAAVGEGR-ERFGHVFLWDSGNSVGEITGHSRRINSVDFKPS------RPFRIATGSDDN 170 (603)
T ss_pred eeeecccccccceeCCCCcEEEEEecCc-cceeEEEEecCCCccceeeccceeEeeeeccCC------CceEEEeccCCC
Confidence 3444458899999999999999887654 333344455332 2222222221111 122334444444
Q ss_pred CeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccC-ceEEEEEccCCceEeec--CCCCCCc
Q 005093 109 TLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQ-PSLFVININSGEVQAVK--GIPKSLS 185 (715)
Q Consensus 109 ~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~l~~~~~~~g~~~~l~--~~~~~~~ 185 (715)
.++|.--. +.+.-....+.....+..+|.|| |+.++..+. ..++++|-++|+..-.- .......
T Consensus 171 -~v~ffeGP-----------PFKFk~s~r~HskFV~~VRysPD-G~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGs 237 (603)
T KOG0318|consen 171 -TVAFFEGP-----------PFKFKSSFREHSKFVNCVRYSPD-GSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGS 237 (603)
T ss_pred -eEEEeeCC-----------CeeeeecccccccceeeEEECCC-CCeEEEecCCccEEEEcCCCccEEEEecCCCCcccc
Confidence 35554221 12222333344556778889999 777765554 78999999998865431 1122346
Q ss_pred cceEEEecCCCCCccEEEEEeecCc----------------------cceeeeeeeecCCceEEEEecccccchhhhhhh
Q 005093 186 VGQVVWAPLNEGLHQYLVFVGWSSE----------------------TRKLGIKYCYNRPCALYAVRVSLYKSEASELEL 243 (715)
Q Consensus 186 ~~~~~~spdg~~~~~~i~~~~~~~~----------------------~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (715)
+..++||||+++ ++..+.... +...|--| .+.+|..+.+.++ |+.
T Consensus 238 IfalsWsPDs~~----~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lW---qkd~lItVSl~G~------in~ 304 (603)
T KOG0318|consen 238 IFALSWSPDSTQ----FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLW---QKDHLITVSLSGT------INY 304 (603)
T ss_pred EEEEEECCCCce----EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEE---eCCeEEEEEcCcE------EEE
Confidence 778999999999 887653221 11222222 1234555543110 000
Q ss_pred hccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 244 KESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 244 ~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
.... .......+..+...+.....||||++|+-.+.+
T Consensus 305 ln~~-d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD 341 (603)
T KOG0318|consen 305 LNPS-DPSVLKVISGHNKSITALTVSPDGKTIYSGSYD 341 (603)
T ss_pred eccc-CCChhheecccccceeEEEEcCCCCEEEeeccC
Confidence 0000 111233444556678889999999988766654
No 171
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.89 E-value=1.4e-08 Score=100.49 Aligned_cols=119 Identities=21% Similarity=0.280 Sum_probs=85.8
Q ss_pred CceEEEEEEecCCCCC---CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC---
Q 005093 462 QKPFEAIFVSSSHKKD---CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK--- 535 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~---~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~--- 535 (715)
+.++...++.|..... ..+.|+|++-||.+.. ...|...++.+++.||+|..++++|+..-+.......+..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~--~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p 126 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY--VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAP 126 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCC--ccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccch
Confidence 5566777888875422 2478999999995443 5578888999999999999999998653222221112111
Q ss_pred -CCccchhhHHHHHHHHHHc---C----CCCCceEEEEEeChhHHHHHHHHhhCC
Q 005093 536 -VGSQDVNDVLTAIDHVIDM---G----LANPSKVTVVGGSHGGFLTTHLIGQAP 582 (715)
Q Consensus 536 -~~~~~~~d~~~~i~~l~~~---~----~~d~~~i~l~G~S~GG~~a~~~a~~~p 582 (715)
.......|+...+++|.+. + .+|..+|+++|||+||+.++.++....
T Consensus 127 ~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 127 AEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred hhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 1112367888888888887 4 378999999999999999998876544
No 172
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.88 E-value=9.6e-08 Score=89.74 Aligned_cols=150 Identities=17% Similarity=0.244 Sum_probs=93.3
Q ss_pred cceEEeeCCCCceEEEEecCC--C------CCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEe
Q 005093 44 GASAVVPSPSGSKLLVVRNPE--N------ESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
......|+|+|++|++....+ + +...+|.+...+.......+... +.+..++|||+|+++|.+.
T Consensus 7 ~~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~--------~~I~~~~WsP~g~~favi~ 78 (194)
T PF08662_consen 7 DDAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKE--------GPIHDVAWSPNGNEFAVIY 78 (194)
T ss_pred ceEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCC--------CceEEEEECcCCCEEEEEE
Confidence 346679999999999987632 1 23356666533333333333221 1237999999999998874
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
... ...+.++|+++.....+ .......+.|||+|
T Consensus 79 g~~------------------------------------------~~~v~lyd~~~~~i~~~----~~~~~n~i~wsP~G 112 (194)
T PF08662_consen 79 GSM------------------------------------------PAKVTLYDVKGKKIFSF----GTQPRNTISWSPDG 112 (194)
T ss_pred ccC------------------------------------------CcccEEEcCcccEeEee----cCCCceEEEECCCC
Confidence 311 13577788865544444 12344578999999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeE
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l 275 (715)
+. |+..+.. +..++|..+|. ...+..... +........|||||++|
T Consensus 113 ~~----l~~~g~~------------n~~G~l~~wd~-----------------~~~~~i~~~-~~~~~t~~~WsPdGr~~ 158 (194)
T PF08662_consen 113 RF----LVLAGFG------------NLNGDLEFWDV-----------------RKKKKISTF-EHSDATDVEWSPDGRYL 158 (194)
T ss_pred CE----EEEEEcc------------CCCcEEEEEEC-----------------CCCEEeecc-ccCcEEEEEEcCCCCEE
Confidence 98 8887521 22346888886 322222222 22346789999999999
Q ss_pred EEEecC
Q 005093 276 VFLSAK 281 (715)
Q Consensus 276 ~~~~~~ 281 (715)
+.....
T Consensus 159 ~ta~t~ 164 (194)
T PF08662_consen 159 ATATTS 164 (194)
T ss_pred EEEEec
Confidence 877654
No 173
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.87 E-value=5.8e-08 Score=102.76 Aligned_cols=121 Identities=16% Similarity=0.201 Sum_probs=78.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC---CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc-
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD- 540 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~---~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~- 540 (715)
++.+-|.|... ...+.| ||+++....... -..-..++++|.++||.|+++|.+..+. . ...++..+
T Consensus 201 ~eLiqY~P~te-~v~~~P-LLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~---~-----~r~~~ldDY 270 (560)
T TIGR01839 201 LELIQYKPITE-QQHARP-LLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDK---A-----HREWGLSTY 270 (560)
T ss_pred eEEEEeCCCCC-CcCCCc-EEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCCh---h-----hcCCCHHHH
Confidence 44456666521 122344 666776322111 1122457899999999999999987322 1 11222112
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHH----HHhhCCC-ceeEEEecCCcchh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTH----LIGQAPD-KFVAAAARNPLCNL 597 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~----~a~~~p~-~~~~~v~~~~~~~~ 597 (715)
++.+.++|+.+.+. ...++|.++|+|+||.+++. +++++++ +++.++++...+|+
T Consensus 271 v~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 271 VDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 34666777777766 34688999999999999996 6777785 79999988877764
No 174
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.85 E-value=1.6e-07 Score=102.70 Aligned_cols=180 Identities=12% Similarity=0.063 Sum_probs=112.1
Q ss_pred cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEee
Q 005093 98 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 177 (715)
Q Consensus 98 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l 177 (715)
....+..||||++++|+....... .+ ...+||+++. +++.+++
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~-------------------------------~d-----~~s~Lwv~~~-gg~~~~l 393 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGA-------------------------------PD-----PASSLWVGPL-GGVAVQV 393 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCC-------------------------------CC-----cceEEEEEeC-CCcceee
Confidence 347999999999999987532110 00 2478999997 4555777
Q ss_pred cCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC
Q 005093 178 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT 257 (715)
Q Consensus 178 ~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 257 (715)
+.+. ....++|||||+. |+|..+.. +..+........+||.+++ .+++.+.
T Consensus 394 --t~g~-~~t~PsWspDG~~----lw~v~dg~---~~~~v~~~~~~gql~~~~v-----------------d~ge~~~-- 444 (591)
T PRK13616 394 --LEGH-SLTRPSWSLDADA----VWVVVDGN---TVVRVIRDPATGQLARTPV-----------------DASAVAS-- 444 (591)
T ss_pred --ecCC-CCCCceECCCCCc----eEEEecCc---ceEEEeccCCCceEEEEec-----------------cCchhhh--
Confidence 3444 3778999999999 99886421 1111111123458998886 6666655
Q ss_pred CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEe---eecCCCCCCCcccceeeeeeceecCCCCCccccccCC
Q 005093 258 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR---IDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 258 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~---~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
...+.+.+++|||||++|+|+... +||+ .....|. ..++... .+... ....
T Consensus 445 ~~~g~Issl~wSpDG~RiA~i~~g------------~v~Va~Vvr~~~G~-~~l~~~~----~l~~~---------l~~~ 498 (591)
T PRK13616 445 RVPGPISELQLSRDGVRAAMIIGG------------KVYLAVVEQTEDGQ-YALTNPR----EVGPG---------LGDT 498 (591)
T ss_pred ccCCCcCeEEECCCCCEEEEEECC------------EEEEEEEEeCCCCc-eeecccE----Eeecc---------cCCc
Confidence 344568999999999999998821 4776 4433433 4443211 11000 0011
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 371 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 371 (715)
...+.|..+++ |+.... .+...+|.+++++...+.
T Consensus 499 ~~~l~W~~~~~-L~V~~~-~~~~~v~~v~vDG~~~~~ 533 (591)
T PRK13616 499 AVSLDWRTGDS-LVVGRS-DPEHPVWYVNLDGSNSDA 533 (591)
T ss_pred cccceEecCCE-EEEEec-CCCCceEEEecCCccccc
Confidence 34678999987 554433 455678999997554443
No 175
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.84 E-value=2.7e-08 Score=92.50 Aligned_cols=207 Identities=15% Similarity=0.088 Sum_probs=106.6
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC--
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL-- 556 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~-- 556 (715)
.+..++.|-|-|+... .|..+...|-. -+.++.+.++| .|..+. ..-..|+.+.++.+.....
T Consensus 6 ~~~~L~cfP~AGGsa~---~fr~W~~~lp~-~iel~avqlPG---R~~r~~--------ep~~~di~~Lad~la~el~~~ 70 (244)
T COG3208 6 ARLRLFCFPHAGGSAS---LFRSWSRRLPA-DIELLAVQLPG---RGDRFG--------EPLLTDIESLADELANELLPP 70 (244)
T ss_pred CCceEEEecCCCCCHH---HHHHHHhhCCc-hhheeeecCCC---cccccC--------CcccccHHHHHHHHHHHhccc
Confidence 3444566666665443 34444444422 58899999999 433321 1124455555555554321
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcch-hhhhccCCCCCCceeeeccCCCCCCCCCCCCC--hh
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN-LALMVGTTDIPDWCYVESYGSKGKDSFTESPS--VE 630 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 630 (715)
....+++++||||||.+|..+|.+.- ....+..+.+.... ...........+-.+.. ....+.+.+. .+
T Consensus 71 ~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~-----~l~~lgG~p~e~le 145 (244)
T COG3208 71 LLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLA-----DLVDLGGTPPELLE 145 (244)
T ss_pred cCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHH-----HHHHhCCCChHHhc
Confidence 33468999999999999999886531 11233332221110 00000000011000000 0111222221 12
Q ss_pred hHHHHHhcCch-----------hh--ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC
Q 005093 631 DLTRFHSKSPI-----------SH--ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 697 (715)
Q Consensus 631 ~~~~~~~~sp~-----------~~--~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 697 (715)
+.+.+.-.-|+ .+ -..+.+|+.++.|++|..|..++...+.+.. +...++.+|+| ||.+.. +
T Consensus 146 d~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~fdG-gHFfl~-~ 220 (244)
T COG3208 146 DPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVFDG-GHFFLN-Q 220 (244)
T ss_pred CHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhh---cCCceEEEecC-cceehh-h
Confidence 22222222221 11 1367899999999999999776665555554 34688999986 897653 3
Q ss_pred chHHHHHHHHHHH
Q 005093 698 SDFESFLNIGLWF 710 (715)
Q Consensus 698 ~~~~~~~~i~~wl 710 (715)
...++...|.+.+
T Consensus 221 ~~~~v~~~i~~~l 233 (244)
T COG3208 221 QREEVLARLEQHL 233 (244)
T ss_pred hHHHHHHHHHHHh
Confidence 3334555555544
No 176
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.84 E-value=6.4e-07 Score=96.07 Aligned_cols=261 Identities=13% Similarity=0.150 Sum_probs=148.9
Q ss_pred CCCCceEEEEecCCCCCC-eEEEEe-c--CCcc-EEEEecCccc-cc-cccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 51 SPSGSKLLVVRNPENESP-IQFELW-S--QSQL-EKEFHVPQTV-HG-SVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 51 Spdg~~la~~~~~~~~~~-~~~~~~-~--~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
...|.+..|....++... .++... . +|.. +.+++..... .+ .+ ....+++||||++|||.....+
T Consensus 75 ~~~g~~~y~~~~~~~~~~~~~~r~~~~~~~~~~~evllD~n~l~~~~~~~----~~~~~~~Spdg~~la~~~s~~G---- 146 (414)
T PF02897_consen 75 VRRGGYYYYSRNQGGKNYPVLYRRKTDEEDGPEEEVLLDPNELAKDGGYV----SLGGFSVSPDGKRLAYSLSDGG---- 146 (414)
T ss_dssp EEETTEEEEEEE-SS-SS-EEEEEETTS-TS-C-EEEEEGGGGSTTSS-E----EEEEEEETTTSSEEEEEEEETT----
T ss_pred EEECCeEEEEEEcCCCceEEEEEEecccCCCCceEEEEcchHhhccCceE----EeeeeeECCCCCEEEEEecCCC----
Confidence 347778888876653333 344444 2 3444 5556543211 11 11 1247889999999999876542
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
. ....|+++|+++|+...- .-.......+.|++||+. ++
T Consensus 147 ------------------------------~-----e~~~l~v~Dl~tg~~l~d--~i~~~~~~~~~W~~d~~~----~~ 185 (414)
T PF02897_consen 147 ------------------------------S-----EWYTLRVFDLETGKFLPD--GIENPKFSSVSWSDDGKG----FF 185 (414)
T ss_dssp ------------------------------S-----SEEEEEEEETTTTEEEEE--EEEEEESEEEEECTTSSE----EE
T ss_pred ------------------------------C-----ceEEEEEEECCCCcCcCC--cccccccceEEEeCCCCE----EE
Confidence 1 247899999999975432 111112223899999999 99
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce--ecCCCCcc---ccceeEcCCCCeEEEE
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV--NLTESISS---AFFPRFSPDGKFLVFL 278 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~lt~~~~~---~~~~~~spdg~~l~~~ 278 (715)
|+......+.. ..+...+||++.+ .+.... .+..+... ......|+||++|+..
T Consensus 186 y~~~~~~~~~~----~~~~~~~v~~~~~-----------------gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~ 244 (414)
T PF02897_consen 186 YTRFDEDQRTS----DSGYPRQVYRHKL-----------------GTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFIS 244 (414)
T ss_dssp EEECSTTTSS-----CCGCCEEEEEEET-----------------TS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEE
T ss_pred EEEeCcccccc----cCCCCcEEEEEEC-----------------CCChHhCeeEEeecCCCcEEEEEEecCcccEEEEE
Confidence 98865432200 1123568999997 333332 34333222 3467889999999887
Q ss_pred ecCCCCCCCCccccceeEeeecCCCC-----CCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNG-----NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~-----~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
+.... . ...+|++++..+. .+.+.... ++ .... ....|..+++.++.
T Consensus 245 ~~~~~------~-~s~v~~~d~~~~~~~~~~~~~l~~~~-----------~~---------~~~~-v~~~~~~~yi~Tn~ 296 (414)
T PF02897_consen 245 SSSGT------S-ESEVYLLDLDDGGSPDAKPKLLSPRE-----------DG---------VEYY-VDHHGDRLYILTND 296 (414)
T ss_dssp EESSS------S-EEEEEEEECCCTTTSS-SEEEEEESS-----------SS----------EEE-EEEETTEEEEEE-T
T ss_pred EEccc------c-CCeEEEEeccccCCCcCCcEEEeCCC-----------Cc---------eEEE-EEccCCEEEEeeCC
Confidence 77642 2 4689999998751 12221111 11 0000 11125567777764
Q ss_pred C-CeeEEEEEECCCCc---EE-EecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 354 G-SSQVIISVNVSSGE---LL-RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 354 ~-~~~~l~~~d~~tg~---~~-~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+ ...+|+.+++++.. .. .+...........++..++.|++...... -++|.++++.
T Consensus 297 ~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~-~~~l~v~~~~ 357 (414)
T PF02897_consen 297 DAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENG-SSRLRVYDLD 357 (414)
T ss_dssp T-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETT-EEEEEEEETT
T ss_pred CCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECC-ccEEEEEECC
Confidence 3 46789999998765 33 45554444455677788888887665444 4568888876
No 177
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.83 E-value=1.1e-08 Score=101.92 Aligned_cols=113 Identities=16% Similarity=0.192 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchH-HHH-HHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSK-SLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~-~~~-~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
...|++|++||..... ...|.. +.. ++...+|.|+++|+++..... ..... .. .....+++.+++++|.+...
T Consensus 34 ~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~-~~-~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAV-NN-TRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHH-Hh-HHHHHHHHHHHHHHHHHhcC
Confidence 4578999999955443 134433 333 344578999999998742110 00000 00 01113567788888887755
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 596 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 596 (715)
++.++|.|+|||+||+++..++.+.|++++.++++.|...
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 6778999999999999999999999999999999987643
No 178
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.83 E-value=2.5e-08 Score=103.69 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=76.5
Q ss_pred CCcEEEEEcCCCCCCCCccchH-HHHHHH--hCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSK-SLAFLS--SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~-~~~~la--~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
..|++|++||.........|.. +...|. +..|.|+++|++| +|.+...... ........++.+.+++|.+...
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g---~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLS---RAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCC---cCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhC
Confidence 4689999999554322234544 444443 2369999999998 4432211000 1111123567777888876544
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
++.+++.|+||||||.+|..++..+|.++.+++++.|..
T Consensus 116 l~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 116 YPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 677899999999999999999998899999999998854
No 179
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.82 E-value=9.9e-08 Score=95.14 Aligned_cols=100 Identities=25% Similarity=0.383 Sum_probs=65.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHH---hCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLS---SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la---~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
.|.|+++||.+... ..|......+. .. |.|+.+|+|| +|.+. . . ........+.+..+.+..
T Consensus 21 ~~~i~~~hg~~~~~--~~~~~~~~~~~~~~~~-~~~~~~d~~g---~g~s~-~----~--~~~~~~~~~~~~~~~~~~-- 85 (282)
T COG0596 21 GPPLVLLHGFPGSS--SVWRPVFKVLPALAAR-YRVIAPDLRG---HGRSD-P----A--GYSLSAYADDLAALLDAL-- 85 (282)
T ss_pred CCeEEEeCCCCCch--hhhHHHHHHhhccccc-eEEEEecccC---CCCCC-c----c--cccHHHHHHHHHHHHHHh--
Confidence 45899999976553 23333222222 23 9999999998 54443 0 0 111222233444444432
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
...++.++|||+||.+++.++.++|++++++++.++..
T Consensus 86 ~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 86 GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 23449999999999999999999999999999988654
No 180
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=98.80 E-value=5.6e-07 Score=82.45 Aligned_cols=236 Identities=14% Similarity=0.131 Sum_probs=140.3
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (715)
..+.+.++|++..+.+++ ..|-....++....|--||++++-.+++ +...+|.+.. -...++.+....+
T Consensus 59 ~~qhvRlyD~~S~np~Pv----~t~e~h~kNVtaVgF~~dgrWMyTgseD--gt~kIWdlR~-~~~qR~~~~~spV---- 127 (311)
T KOG0315|consen 59 GNQHVRLYDLNSNNPNPV----ATFEGHTKNVTAVGFQCDGRWMYTGSED--GTVKIWDLRS-LSCQRNYQHNSPV---- 127 (311)
T ss_pred cCCeeEEEEccCCCCCce----eEEeccCCceEEEEEeecCeEEEecCCC--ceEEEEeccC-cccchhccCCCCc----
Confidence 445788899998887543 1222334789999999999999644333 4444444432 2334455544444
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
+.+...|+-..|+.. + ...+|++||+....
T Consensus 128 ------n~vvlhpnQteLis~-d-------------------------------------------qsg~irvWDl~~~~ 157 (311)
T KOG0315|consen 128 ------NTVVLHPNQTELISG-D-------------------------------------------QSGNIRVWDLGENS 157 (311)
T ss_pred ------ceEEecCCcceEEee-c-------------------------------------------CCCcEEEEEccCCc
Confidence 788888987777552 1 23679999997663
Q ss_pred -eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 174 -VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 174 -~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
...+. ......+..+...|||+. ++-.. ..+..|+.++.. .+..+. -..
T Consensus 158 c~~~li-Pe~~~~i~sl~v~~dgsm----l~a~n---------------nkG~cyvW~l~~-~~~~s~---------l~P 207 (311)
T KOG0315|consen 158 CTHELI-PEDDTSIQSLTVMPDGSM----LAAAN---------------NKGNCYVWRLLN-HQTASE---------LEP 207 (311)
T ss_pred cccccC-CCCCcceeeEEEcCCCcE----EEEec---------------CCccEEEEEccC-CCcccc---------ceE
Confidence 34442 344457888999999997 66443 223577777610 000000 011
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC--CCCCcccceeeeeeceecCCCCCcccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN--GNFSSLEKIVDVIPVVQCAEGDCFPGL 330 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~--~~~~lt~~~~~~~~~~~~~~~~~~~g~ 330 (715)
.+++....+.+..-.+|||+|+||-.+.+. .+++++.++- ..+.++..+
T Consensus 208 ~~k~~ah~~~il~C~lSPd~k~lat~ssdk-----------tv~iwn~~~~~kle~~l~gh~------------------ 258 (311)
T KOG0315|consen 208 VHKFQAHNGHILRCLLSPDVKYLATCSSDK-----------TVKIWNTDDFFKLELVLTGHQ------------------ 258 (311)
T ss_pred hhheecccceEEEEEECCCCcEEEeecCCc-----------eEEEEecCCceeeEEEeecCC------------------
Confidence 223344566788889999999999887764 3666665542 112222221
Q ss_pred ccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 331 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 331 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
.-....+||.||++| ++...+...+|| ++..++..+...
T Consensus 259 --rWvWdc~FS~dg~Yl-vTassd~~~rlW--~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 259 --RWVWDCAFSADGEYL-VTASSDHTARLW--DLSAGKEVRQYQ 297 (311)
T ss_pred --ceEEeeeeccCccEE-EecCCCCceeec--ccccCceeeecC
Confidence 012355789999855 555545666776 555566554443
No 181
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.80 E-value=8.6e-08 Score=90.99 Aligned_cols=191 Identities=20% Similarity=0.239 Sum_probs=117.0
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC----------------CCCCC---
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL----------------PGKVG--- 537 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~----------------~~~~~--- 537 (715)
.+.++|+|||-||-+.. ..-|.....-||.+||+|.++..|.....-.-..... ..+-.
T Consensus 114 k~~k~PvvvFSHGLggs--Rt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGS--RTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCccEEEEecccccc--hhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 46789999999995544 3467788889999999999999987432111000000 00000
Q ss_pred ------ccchhhHHHHHHHHHHc---------------------CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEe
Q 005093 538 ------SQDVNDVLTAIDHVIDM---------------------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAA 590 (715)
Q Consensus 538 ------~~~~~d~~~~i~~l~~~---------------------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 590 (715)
...+.++..|+.-|.+- +.+|..+++++|||+||..++...+.+ ..|+++|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeee
Confidence 11245677777666542 125678899999999999888777764 46999997
Q ss_pred cCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHH
Q 005093 591 RNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQY 670 (715)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~ 670 (715)
..++. + |... ....+.+.|+|+|.-+ |... -+....
T Consensus 271 lD~WM---------------~---------------Pl~~-----------~~~~~arqP~~finv~-~fQ~--~en~~v 306 (399)
T KOG3847|consen 271 LDAWM---------------F---------------PLDQ-----------LQYSQARQPTLFINVE-DFQW--NENLLV 306 (399)
T ss_pred eeeee---------------c---------------ccch-----------hhhhhccCCeEEEEcc-cccc--hhHHHH
Confidence 76632 1 1000 1223456788888733 3222 233444
Q ss_pred HHHHHHcCCcEEEEEeCCCCccCCC---------------------C-CchHHHHHHHHHHHHHhc
Q 005093 671 ARALREKGVETKVIVFPNDVHGIER---------------------P-QSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 671 ~~~l~~~g~~~~~~~~~~~~H~~~~---------------------~-~~~~~~~~~i~~wl~~~l 714 (715)
.+.....+..-.++.+.|+-|.-.. + +......+..++||++|+
T Consensus 307 mKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 307 MKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred HHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhh
Confidence 5555555555567888888884211 1 112335567888998875
No 182
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.79 E-value=6.6e-08 Score=88.75 Aligned_cols=221 Identities=12% Similarity=0.114 Sum_probs=112.2
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc-
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS- 538 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~- 538 (715)
.+|..|+.|--.|++. ...+.|.||+..|.+ .....|..++.+|+..||.|+.+|.... -|.+... ...+..
T Consensus 10 ~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~--rrmdh~agLA~YL~~NGFhViRyDsl~H--vGlSsG~--I~eftms 82 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNN-EPKRNNTILIAPGFA--RRMDHFAGLAEYLSANGFHVIRYDSLNH--VGLSSGD--INEFTMS 82 (294)
T ss_dssp TTTEEEEEEEE---TT-S---S-EEEEE-TT---GGGGGGHHHHHHHHTTT--EEEE---B-----------------HH
T ss_pred CCCCEEEEeccCCCCC-CcccCCeEEEecchh--HHHHHHHHHHHHHhhCCeEEEecccccc--ccCCCCC--hhhcchH
Confidence 4788899888888853 456678999999843 3355788899999999999999996531 1222110 111111
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
...+++..+++||.+.+ ..+++|+..|.-|-+|...+++ . ...-+|...+++++.......-..++.....-..+
T Consensus 83 ~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp 157 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLP 157 (294)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--
T ss_pred HhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCC
Confidence 22578889999999776 4779999999999999999885 4 36777777799887533211100000000000000
Q ss_pred CCCCCCCCCCh--hhHHHHH------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCC
Q 005093 619 GKDSFTESPSV--EDLTRFH------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 690 (715)
Q Consensus 619 ~~~~~~~~~~~--~~~~~~~------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 690 (715)
....+.+.... ....... ..+-...++.+.+|++..++.+|.+|...+..++...+. ...+++..++|+.
T Consensus 158 ~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~--s~~~klysl~Gs~ 235 (294)
T PF02273_consen 158 EDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNIN--SNKCKLYSLPGSS 235 (294)
T ss_dssp SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-T--T--EEEEEETT-S
T ss_pred CcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcC--CCceeEEEecCcc
Confidence 00000000000 0001111 112335677889999999999999997776666655543 2468899999999
Q ss_pred ccCC
Q 005093 691 HGIE 694 (715)
Q Consensus 691 H~~~ 694 (715)
|.+.
T Consensus 236 HdL~ 239 (294)
T PF02273_consen 236 HDLG 239 (294)
T ss_dssp S-TT
T ss_pred chhh
Confidence 9775
No 183
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=98.78 E-value=1.8e-06 Score=81.01 Aligned_cols=267 Identities=13% Similarity=0.156 Sum_probs=151.5
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEec--CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEe
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
+..+.+.+....||+|+++|+-.+..+ ...+|+ +......+.++.. |+...++||.|+.+|...
T Consensus 51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDG-----klIvWDs~TtnK~haipl~s~---------WVMtCA~sPSg~~VAcGG 116 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDSRRIVSASQDG-----KLIVWDSFTTNKVHAIPLPSS---------WVMTCAYSPSGNFVACGG 116 (343)
T ss_pred ecccccceeeeEecCCcCeEEeeccCC-----eEEEEEcccccceeEEecCce---------eEEEEEECCCCCeEEecC
Confidence 444558899999999999998765543 455662 3333333333322 558999999999998854
Q ss_pred ecCCCCCCCccCCCCC-C-----CCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceE
Q 005093 116 EEPSPSKPTFSLGSTK-G-----GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQV 189 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~ 189 (715)
-+..-. .+.+.... . .........+..-..|..| +..+...+.....+||+++|+....- ......+-.+
T Consensus 117 LdN~Cs--iy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f-~GH~gDV~sl 192 (343)
T KOG0286|consen 117 LDNKCS--IYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVF-HGHTGDVMSL 192 (343)
T ss_pred cCceeE--EEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEe-cCCcccEEEE
Confidence 222111 11111110 0 0111122333333446655 55666667788999999999877652 2222346678
Q ss_pred EEec-CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeE
Q 005093 190 VWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 268 (715)
Q Consensus 190 ~~sp-dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~ 268 (715)
.++| |++. ++--+ .+ . ...+.|+ +.+.-.+....++..+..+.|
T Consensus 193 sl~p~~~nt----FvSg~-cD------------~--~aklWD~----------------R~~~c~qtF~ghesDINsv~f 237 (343)
T KOG0286|consen 193 SLSPSDGNT----FVSGG-CD------------K--SAKLWDV----------------RSGQCVQTFEGHESDINSVRF 237 (343)
T ss_pred ecCCCCCCe----EEecc-cc------------c--ceeeeec----------------cCcceeEeecccccccceEEE
Confidence 8999 8876 44322 11 1 2344454 255566677777888999999
Q ss_pred cCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEE
Q 005093 269 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 348 (715)
Q Consensus 269 spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~ 348 (715)
-|+|..++-.+.+. . ..++|+..+....+-... ... .++..+.||..|+ |+
T Consensus 238 fP~G~afatGSDD~---------t--cRlyDlRaD~~~a~ys~~------------~~~-----~gitSv~FS~SGR-lL 288 (343)
T KOG0286|consen 238 FPSGDAFATGSDDA---------T--CRLYDLRADQELAVYSHD------------SII-----CGITSVAFSKSGR-LL 288 (343)
T ss_pred ccCCCeeeecCCCc---------e--eEEEeecCCcEEeeeccC------------ccc-----CCceeEEEccccc-EE
Confidence 99998776444432 2 334566664432221111 000 1466888999998 55
Q ss_pred EEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeEEEeecC
Q 005093 349 LSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDG 388 (715)
Q Consensus 349 ~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~~~ 388 (715)
|....+ .....+|.-.++..-+..+.. -++-..+++||
T Consensus 289 fagy~d--~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG 327 (343)
T KOG0286|consen 289 FAGYDD--FTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG 327 (343)
T ss_pred EeeecC--CceeEeeccccceEEEeeccCCeeEEEEECCCC
Confidence 554333 355566765555554443322 23334555554
No 184
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=98.76 E-value=5.4e-07 Score=89.59 Aligned_cols=233 Identities=12% Similarity=0.071 Sum_probs=143.9
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
++++..+|.|....|. +..-+ +.-++|.++ ......+...+..- ++....|+|+|+..+|.+.+
T Consensus 214 ~~I~sv~FHp~~plll-vaG~d-~~lrifqvDGk~N~~lqS~~l~~f---------Pi~~a~f~p~G~~~i~~s~r---- 278 (514)
T KOG2055|consen 214 GGITSVQFHPTAPLLL-VAGLD-GTLRIFQVDGKVNPKLQSIHLEKF---------PIQKAEFAPNGHSVIFTSGR---- 278 (514)
T ss_pred CCceEEEecCCCceEE-EecCC-CcEEEEEecCccChhheeeeeccC---------ccceeeecCCCceEEEeccc----
Confidence 6789999998876554 44443 556677766 32222222222111 23688999999966565432
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC--CCCCCccceEEEecCCCCCc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~--~~~~~~~~~~~~spdg~~~~ 199 (715)
+.-+|.||+.+.++.++.. .-.......|..|||++.
T Consensus 279 ---------------------------------------rky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~f-- 317 (514)
T KOG2055|consen 279 ---------------------------------------RKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNF-- 317 (514)
T ss_pred ---------------------------------------ceEEEEeeccccccccccCCCCcccchhheeEecCCCCe--
Confidence 3679999999999988841 111224667889999998
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~ 279 (715)
|++.+ .++.|+++.. .+++...-..-++.+....||.||+.|+ ++
T Consensus 318 --ia~~G---------------~~G~I~lLha-----------------kT~eli~s~KieG~v~~~~fsSdsk~l~-~~ 362 (514)
T KOG2055|consen 318 --IAIAG---------------NNGHIHLLHA-----------------KTKELITSFKIEGVVSDFTFSSDSKELL-AS 362 (514)
T ss_pred --EEEcc---------------cCceEEeehh-----------------hhhhhhheeeeccEEeeEEEecCCcEEE-EE
Confidence 99887 4458998885 5555443334567789999999998775 44
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
... .++|++|+..... +-...+ ++.. ....++.+.+|. ++.+.++.|-..|
T Consensus 363 ~~~----------GeV~v~nl~~~~~--~~rf~D----------~G~v------~gts~~~S~ng~-ylA~GS~~GiVNI 413 (514)
T KOG2055|consen 363 GGT----------GEVYVWNLRQNSC--LHRFVD----------DGSV------HGTSLCISLNGS-YLATGSDSGIVNI 413 (514)
T ss_pred cCC----------ceEEEEecCCcce--EEEEee----------cCcc------ceeeeeecCCCc-eEEeccCcceEEE
Confidence 332 2699999877532 111111 1111 124567788997 5566777888888
Q ss_pred EEEEC--CCCcEEEecCCCC---CceeEEEeecCCEEEEEE
Q 005093 360 ISVNV--SSGELLRITPAES---NFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 360 ~~~d~--~tg~~~~l~~~~~---~~~~~~~s~~~~~l~~~~ 395 (715)
|-.+- .++..+++..-.- .++...|++|++-|...+
T Consensus 414 Yd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS 454 (514)
T KOG2055|consen 414 YDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIAS 454 (514)
T ss_pred eccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhh
Confidence 87542 2344444432211 244567888775444433
No 185
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.76 E-value=1.5e-07 Score=92.93 Aligned_cols=114 Identities=18% Similarity=0.224 Sum_probs=72.6
Q ss_pred CCCcEEEEEcCCCCCCCCc--------cchH-HH---HHHHhCCcEEEEEcCCCCC-CC-chhhhhcCC----CCCCccc
Q 005093 479 SCDPLIVVLHGGPHSVSLS--------SYSK-SL---AFLSSVGYSLLIVNYRGSL-GF-GEEALQSLP----GKVGSQD 540 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~--------~~~~-~~---~~la~~G~~vi~~d~rG~~-~~-g~~~~~~~~----~~~~~~~ 540 (715)
.+..+||++|+-..+.... .|.. ++ ..+.-.-|-||++|..|+. +. |.+...... ..+....
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 5678999999933322111 1221 11 1233455999999988754 21 111111110 1223345
Q ss_pred hhhHHHHHHHHHHcCCCCCceEE-EEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
+.|++++-+.|++.-.+ +++. ++|.||||+.++..+..+|+++..++.++..
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 78888888888777444 5665 9999999999999999999998887776653
No 186
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.71 E-value=3.4e-07 Score=90.03 Aligned_cols=237 Identities=13% Similarity=0.096 Sum_probs=139.5
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEe-cCccccccccCCCcccceeecCC--CCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~~~~~ 119 (715)
..++...+|+|++.||-.+=. +...+|.+... .....+. ....+ ..+.|+|. +..||-.+.+
T Consensus 176 rPis~~~fS~ds~~laT~sws--G~~kvW~~~~~-~~~~~l~gH~~~v----------~~~~fhP~~~~~~lat~s~D-- 240 (459)
T KOG0272|consen 176 RPISGCSFSRDSKHLATGSWS--GLVKVWSVPQC-NLLQTLRGHTSRV----------GAAVFHPVDSDLNLATASAD-- 240 (459)
T ss_pred CcceeeEeecCCCeEEEeecC--CceeEeecCCc-ceeEEEeccccce----------eeEEEccCCCccceeeeccC--
Confidence 447788999999999855333 33344443333 3333332 22222 78999998 4556654332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc-eEeecCCCCCCccceEEEecCCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
..+.+|++++.. +..++ -....+..++|.|+|+.
T Consensus 241 ------------------------------------------gtvklw~~~~e~~l~~l~--gH~~RVs~VafHPsG~~- 275 (459)
T KOG0272|consen 241 ------------------------------------------GTVKLWKLSQETPLQDLE--GHLARVSRVAFHPSGKF- 275 (459)
T ss_pred ------------------------------------------CceeeeccCCCcchhhhh--cchhhheeeeecCCCce-
Confidence 446777776643 33442 22346778999999998
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~ 278 (715)
|+..+ +.....||-+. ...+......+...+.+.+|.|||.-++-.
T Consensus 276 ---L~Tas-------------fD~tWRlWD~~------------------tk~ElL~QEGHs~~v~~iaf~~DGSL~~tG 321 (459)
T KOG0272|consen 276 ---LGTAS-------------FDSTWRLWDLE------------------TKSELLLQEGHSKGVFSIAFQPDGSLAATG 321 (459)
T ss_pred ---eeecc-------------cccchhhcccc------------------cchhhHhhcccccccceeEecCCCceeecc
Confidence 87765 22223455444 333444445556678999999999955433
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
+.+. ..+ ++|+.++....+..+ +...+..+.|+|+| +.+.+...++..+
T Consensus 322 GlD~---------~~R--vWDlRtgr~im~L~g-------------------H~k~I~~V~fsPNG-y~lATgs~Dnt~k 370 (459)
T KOG0272|consen 322 GLDS---------LGR--VWDLRTGRCIMFLAG-------------------HIKEILSVAFSPNG-YHLATGSSDNTCK 370 (459)
T ss_pred Cccc---------hhh--eeecccCcEEEEecc-------------------cccceeeEeECCCc-eEEeecCCCCcEE
Confidence 3322 122 457777654322111 11235678899999 4667776677777
Q ss_pred EEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEE
Q 005093 359 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKY 406 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~ 406 (715)
+|.+... .....+......++..-|++..+.++++ .+.++.-.||.
T Consensus 371 VWDLR~r-~~ly~ipAH~nlVS~Vk~~p~~g~fL~T-asyD~t~kiWs 416 (459)
T KOG0272|consen 371 VWDLRMR-SELYTIPAHSNLVSQVKYSPQEGYFLVT-ASYDNTVKIWS 416 (459)
T ss_pred Eeeeccc-ccceecccccchhhheEecccCCeEEEE-cccCcceeeec
Confidence 8766543 3344444444456667888866655544 45666666664
No 187
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=98.70 E-value=3.1e-06 Score=77.69 Aligned_cols=242 Identities=14% Similarity=0.073 Sum_probs=140.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCcc--EEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.+....++||++.||-.. ...+...+ ..+.. ...++.. .+.| ..+.|--||++++-.+++
T Consensus 41 sqVNrLeiTpdk~~LAaa~-----~qhvRlyD~~S~np~Pv~t~e~h---~kNV------taVgF~~dgrWMyTgseD-- 104 (311)
T KOG0315|consen 41 SQVNRLEITPDKKDLAAAG-----NQHVRLYDLNSNNPNPVATFEGH---TKNV------TAVGFQCDGRWMYTGSED-- 104 (311)
T ss_pred cceeeEEEcCCcchhhhcc-----CCeeEEEEccCCCCCceeEEecc---CCce------EEEEEeecCeEEEecCCC--
Confidence 5688889999999998652 23333333 33333 3333322 1222 789999999999775432
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
..+.+||+..-..+++ ......+..+...|+...
T Consensus 105 ------------------------------------------gt~kIWdlR~~~~qR~--~~~~spVn~vvlhpnQte-- 138 (311)
T KOG0315|consen 105 ------------------------------------------GTVKIWDLRSLSCQRN--YQHNSPVNTVVLHPNQTE-- 138 (311)
T ss_pred ------------------------------------------ceEEEEeccCcccchh--ccCCCCcceEEecCCcce--
Confidence 5688899877555555 344456778889997766
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-CCCccccceeEcCCCCeEEEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l~~~ 278 (715)
|+... ...+|++.||. +..-...|. +....+.+....|||++|+-.
T Consensus 139 --Lis~d---------------qsg~irvWDl~----------------~~~c~~~liPe~~~~i~sl~v~~dgsml~a~ 185 (311)
T KOG0315|consen 139 --LISGD---------------QSGNIRVWDLG----------------ENSCTHELIPEDDTSIQSLTVMPDGSMLAAA 185 (311)
T ss_pred --EEeec---------------CCCcEEEEEcc----------------CCccccccCCCCCcceeeEEEcCCCcEEEEe
Confidence 54432 22478888972 332233444 444568999999999999755
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
.++. ..|++++-++.... .+.++...+ .+..-+-...+|||+++|.. .+.+....
T Consensus 186 nnkG-----------~cyvW~l~~~~~~s------~l~P~~k~~-------ah~~~il~C~lSPd~k~lat-~ssdktv~ 240 (311)
T KOG0315|consen 186 NNKG-----------NCYVWRLLNHQTAS------ELEPVHKFQ-------AHNGHILRCLLSPDVKYLAT-CSSDKTVK 240 (311)
T ss_pred cCCc-----------cEEEEEccCCCccc------cceEhhhee-------cccceEEEEEECCCCcEEEe-ecCCceEE
Confidence 5542 48888887744311 112221111 11223346678999996644 43344455
Q ss_pred EEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEE
Q 005093 359 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKY 406 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~ 406 (715)
||..+--=+....+.....=.....||.||..|+..++. .-.+++-
T Consensus 241 iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd--~~~rlW~ 286 (311)
T KOG0315|consen 241 IWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSD--HTARLWD 286 (311)
T ss_pred EEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCC--Cceeecc
Confidence 655442212223334343323446889888777654333 4344543
No 188
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.69 E-value=4.7e-06 Score=87.98 Aligned_cols=230 Identities=17% Similarity=0.144 Sum_probs=150.5
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEec-CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
..+...+|+--|.||||-...= ....+|. ..+.--+-+ ++.... +..+..||||+.||-.+++
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~kl----gQLlVweWqsEsYVlKQ--QgH~~~------i~~l~YSpDgq~iaTG~eD---- 371 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKL----GQLLVWEWQSESYVLKQ--QGHSDR------ITSLAYSPDGQLIATGAED---- 371 (893)
T ss_pred ceeeEEEecccCCEEEEcCCcc----ceEEEEEeeccceeeec--cccccc------eeeEEECCCCcEEEeccCC----
Confidence 3477888888999999864421 1334452 111111111 111111 2689999999999886543
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
..|-+||...|-=. .. +.....+..+.|+.+|+.
T Consensus 372 ----------------------------------------gKVKvWn~~SgfC~vTF--teHts~Vt~v~f~~~g~~--- 406 (893)
T KOG0291|consen 372 ----------------------------------------GKVKVWNTQSGFCFVTF--TEHTSGVTAVQFTARGNV--- 406 (893)
T ss_pred ----------------------------------------CcEEEEeccCceEEEEe--ccCCCceEEEEEEecCCE---
Confidence 45788888776422 22 455557889999999985
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc-cccceeEcCCCCeEEEEe
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-~~~~~~~spdg~~l~~~~ 279 (715)
++-++ .++.+-.+|+ ......+.+|.+.. ....++..|.|. |+++.
T Consensus 407 -llssS---------------LDGtVRAwDl----------------kRYrNfRTft~P~p~QfscvavD~sGe-lV~AG 453 (893)
T KOG0291|consen 407 -LLSSS---------------LDGTVRAWDL----------------KRYRNFRTFTSPEPIQFSCVAVDPSGE-LVCAG 453 (893)
T ss_pred -EEEee---------------cCCeEEeeee----------------cccceeeeecCCCceeeeEEEEcCCCC-EEEee
Confidence 54443 2235666776 24556677776544 466678888887 55665
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
..+ ...|+++++++|+...+..+ +...+..++|+|+|. ++++.+++.+.++
T Consensus 454 ~~d---------~F~IfvWS~qTGqllDiLsG-------------------HEgPVs~l~f~~~~~-~LaS~SWDkTVRi 504 (893)
T KOG0291|consen 454 AQD---------SFEIFVWSVQTGQLLDILSG-------------------HEGPVSGLSFSPDGS-LLASGSWDKTVRI 504 (893)
T ss_pred ccc---------eEEEEEEEeecCeeeehhcC-------------------CCCcceeeEEccccC-eEEeccccceEEE
Confidence 443 46799999999886433221 223456778999998 7788889988899
Q ss_pred EEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEe
Q 005093 360 ISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 360 ~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
|-+=-..+.++.+..... +-...|.|+|.+|.....
T Consensus 505 W~if~s~~~vEtl~i~sd-vl~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 505 WDIFSSSGTVETLEIRSD-VLAVSFRPDGKELAVATL 540 (893)
T ss_pred EEeeccCceeeeEeeccc-eeEEEEcCCCCeEEEEEe
Confidence 987666677777765433 344689999999876653
No 189
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=98.69 E-value=8e-07 Score=85.76 Aligned_cols=217 Identities=15% Similarity=0.211 Sum_probs=120.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe---cCCccEEEEecCccccccccCC---CcccceeecCCCCeEEEEee
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYAD---GWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~wSpDg~~la~~~~ 116 (715)
.++...+|=|-+....-+.=+ .-..+| ..+...+........+..|+-+ -.+..+.|.+||..++-.+-
T Consensus 141 rnvtclawRPlsaselavgCr-----~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~ 215 (445)
T KOG2139|consen 141 RNVTCLAWRPLSASELAVGCR-----AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASF 215 (445)
T ss_pred cceeEEEeccCCcceeeeeec-----ceeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeeccc
Confidence 568889999988765444322 235566 2222222211111112222111 14489999999998877543
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
. ...|.+||+++|...+|. ..+.....-+.|||||.
T Consensus 216 g-------------------------------------------sssi~iWdpdtg~~~pL~-~~glgg~slLkwSPdgd 251 (445)
T KOG2139|consen 216 G-------------------------------------------SSSIMIWDPDTGQKIPLI-PKGLGGFSLLKWSPDGD 251 (445)
T ss_pred C-------------------------------------------cceEEEEcCCCCCccccc-ccCCCceeeEEEcCCCC
Confidence 2 277999999999988883 12333456789999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
. +|.+..+.. ..+|-.+ +.-+.++-.-..+.+....|||+|++|.
T Consensus 252 ~-----lfaAt~dav------------frlw~e~------------------q~wt~erw~lgsgrvqtacWspcGsfLL 296 (445)
T KOG2139|consen 252 V-----LFAATCDAV------------FRLWQEN------------------QSWTKERWILGSGRVQTACWSPCGSFLL 296 (445)
T ss_pred E-----EEEecccce------------eeeehhc------------------ccceecceeccCCceeeeeecCCCCEEE
Confidence 5 555532221 1344222 3333333333445788899999999999
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCc-ccceeeeeeceecCCCCCccc--cccCCCCCCccccCCCEEEEEeee
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-LEKIVDVIPVVQCAEGDCFPG--LYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~l-t~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
|+.... ..||.+..+......+ ..+...+..+.+-++-..-.| +-+.....++|.|.|.++.++...
T Consensus 297 f~~sgs----------p~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg 366 (445)
T KOG2139|consen 297 FACSGS----------PRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKG 366 (445)
T ss_pred EEEcCC----------ceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcC
Confidence 998764 3477666554332111 111122211111111000000 112355788999999988776553
No 190
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=98.69 E-value=5.5e-06 Score=77.13 Aligned_cols=229 Identities=17% Similarity=0.227 Sum_probs=129.9
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-c-CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-S-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
..++..+|||.|++||-.+-.. ...+| + +++-+-+..+ .+..+.| ..++||++|.+||-.+.+
T Consensus 62 rsVRsvAwsp~g~~La~aSFD~-----t~~Iw~k~~~efecv~~l-EGHEnEV------K~Vaws~sG~~LATCSRD--- 126 (312)
T KOG0645|consen 62 RSVRSVAWSPHGRYLASASFDA-----TVVIWKKEDGEFECVATL-EGHENEV------KCVAWSASGNYLATCSRD--- 126 (312)
T ss_pred heeeeeeecCCCcEEEEeeccc-----eEEEeecCCCceeEEeee-eccccce------eEEEEcCCCCEEEEeeCC---
Confidence 5589999999999998765542 44566 3 3333332222 3332333 799999999999986432
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC--CCCCCccceEEEecCCCCC
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~--~~~~~~~~~~~~spdg~~~ 198 (715)
..+|+|..+.+......+ .+....+-.+.|.|.-.
T Consensus 127 -----------------------------------------KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d-- 163 (312)
T KOG0645|consen 127 -----------------------------------------KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED-- 163 (312)
T ss_pred -----------------------------------------CeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc--
Confidence 458888876544322110 23344577889999665
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-CceecCCCCccccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
|+|+...+. .-.+|.-+.+ ..- -...|...........|++.|.+|+-
T Consensus 164 ---lL~S~SYDn------------TIk~~~~~~d----------------ddW~c~~tl~g~~~TVW~~~F~~~G~rl~s 212 (312)
T KOG0645|consen 164 ---LLFSCSYDN------------TIKVYRDEDD----------------DDWECVQTLDGHENTVWSLAFDNIGSRLVS 212 (312)
T ss_pred ---eeEEeccCC------------eEEEEeecCC----------------CCeeEEEEecCccceEEEEEecCCCceEEE
Confidence 677653211 1134433310 111 14456666667889999999999988
Q ss_pred EecCCCCCCC------CccccceeEeeecCCCCCCCcccceeeeeeceecCCC---CC------ccccccCCCCCCcccc
Q 005093 278 LSAKSSVDSG------AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG---DC------FPGLYSSSILSNPWLS 342 (715)
Q Consensus 278 ~~~~~~~~~g------~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~---~~------~~g~~~~~~~~~~~~~ 342 (715)
.+.+.+.... .+.....||.+.+.+ +.+ -+.+.+..+.+...... .. ..+.+...++.+.|.|
T Consensus 213 ~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~~-~~I-aS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p 290 (312)
T KOG0645|consen 213 CSDDGTVSIWRLYTDLSGMHSRALYDVPWDN-GVI-ASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNP 290 (312)
T ss_pred ecCCcceEeeeeccCcchhcccceEeeeecc-cce-EeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcC
Confidence 8877543210 001123466555552 111 11222333333332221 11 1123445677888998
Q ss_pred CCCEEEEEeeeCCeeEEEEE
Q 005093 343 DGCTMLLSSIWGSSQVIISV 362 (715)
Q Consensus 343 dg~~l~~~~~~~~~~~l~~~ 362 (715)
.+.-++++..++|..++|.+
T Consensus 291 ~~~~~L~s~~DDG~v~~W~l 310 (312)
T KOG0645|consen 291 KVSNRLASGGDDGIVNFWEL 310 (312)
T ss_pred CCCCceeecCCCceEEEEEe
Confidence 65667777777787777765
No 191
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.69 E-value=3.5e-07 Score=89.88 Aligned_cols=241 Identities=13% Similarity=0.110 Sum_probs=140.1
Q ss_pred CccccccceEEeeCCC--CceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEe
Q 005093 38 FPVEMTGASAVVPSPS--GSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spd--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
|..+.+.+....|+|. +..||-.+.+ +...+|.+........++.....+ ..++|.|+|++|+-.+
T Consensus 213 l~gH~~~v~~~~fhP~~~~~~lat~s~D--gtvklw~~~~e~~l~~l~gH~~RV----------s~VafHPsG~~L~Tas 280 (459)
T KOG0272|consen 213 LRGHTSRVGAAVFHPVDSDLNLATASAD--GTVKLWKLSQETPLQDLEGHLARV----------SRVAFHPSGKFLGTAS 280 (459)
T ss_pred EeccccceeeEEEccCCCccceeeeccC--CceeeeccCCCcchhhhhcchhhh----------eeeeecCCCceeeecc
Confidence 4455578899999998 4566655443 333333332222222333322233 7899999999988764
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC-CCccceEEEecC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPL 194 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~~~~~spd 194 (715)
-+ ..-.+||+.++....+ ..+ +-.+...+|.||
T Consensus 281 fD--------------------------------------------~tWRlWD~~tk~ElL~--QEGHs~~v~~iaf~~D 314 (459)
T KOG0272|consen 281 FD--------------------------------------------STWRLWDLETKSELLL--QEGHSKGVFSIAFQPD 314 (459)
T ss_pred cc--------------------------------------------cchhhcccccchhhHh--hcccccccceeEecCC
Confidence 43 3346789988876544 232 336789999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCe
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 274 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~ 274 (715)
|. ++-++..+ ....||-+. .+..+..|..+...+..+.|||+|-.
T Consensus 315 GS-----L~~tGGlD------------~~~RvWDlR------------------tgr~im~L~gH~k~I~~V~fsPNGy~ 359 (459)
T KOG0272|consen 315 GS-----LAATGGLD------------SLGRVWDLR------------------TGRCIMFLAGHIKEILSVAFSPNGYH 359 (459)
T ss_pred Cc-----eeeccCcc------------chhheeecc------------------cCcEEEEecccccceeeEeECCCceE
Confidence 98 55554211 112344332 34445566777778999999999999
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
||-.+.+.+ .-++|+.......+ + | .+..-+..+.++|+...++++..-+
T Consensus 360 lATgs~Dnt-----------~kVWDLR~r~~ly~------------i------p-AH~nlVS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 360 LATGSSDNT-----------CKVWDLRMRSELYT------------I------P-AHSNLVSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred EeecCCCCc-----------EEEeeeccccccee------------c------c-cccchhhheEecccCCeEEEEcccC
Confidence 987766642 44556654332110 0 0 0122356778998666777887777
Q ss_pred CeeEEEEEECCCCcE-EEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEE
Q 005093 355 SSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVK 405 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~ 405 (715)
...+||. ..+... +.+....+-+....+++++..++ ..+.++.-.+|
T Consensus 410 ~t~kiWs--~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~--t~s~DRT~KLW 457 (459)
T KOG0272|consen 410 NTVKIWS--TRTWSPLKSLAGHEGKVISLDISPDSQAIA--TSSFDRTIKLW 457 (459)
T ss_pred cceeeec--CCCcccchhhcCCccceEEEEeccCCceEE--EeccCceeeec
Confidence 7777774 334443 33444443232235566666554 34455544433
No 192
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=98.68 E-value=3.5e-06 Score=84.17 Aligned_cols=254 Identities=15% Similarity=0.207 Sum_probs=159.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEE-ecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
..++..+|+-||..||+....+ ...+| ..|.....+ +.... +-.+.|+.+|++|+-...
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G-----~~riw~~~G~l~~tl~~HkgP----------I~slKWnk~G~yilS~~v---- 296 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDG-----EARIWNKDGNLISTLGQHKGP----------IFSLKWNKKGTYILSGGV---- 296 (524)
T ss_pred CCcceEEecCCCCeEEEeecCc-----EEEEEecCchhhhhhhccCCc----------eEEEEEcCCCCEEEeccC----
Confidence 5689999999999999987764 55677 555544333 22222 269999999999987422
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...+.+||.-+|+..+.. ...+...-++.|--+.+
T Consensus 297 ----------------------------------------D~ttilwd~~~g~~~q~f-~~~s~~~lDVdW~~~~~---- 331 (524)
T KOG0273|consen 297 ----------------------------------------DGTTILWDAHTGTVKQQF-EFHSAPALDVDWQSNDE---- 331 (524)
T ss_pred ----------------------------------------CccEEEEeccCceEEEee-eeccCCccceEEecCce----
Confidence 256889999999887662 22233335678876554
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
++... ..+.|+++-++ .......+..+.+.+....|.|.|+-|+-.+.
T Consensus 332 -F~ts~---------------td~~i~V~kv~----------------~~~P~~t~~GH~g~V~alk~n~tg~LLaS~Sd 379 (524)
T KOG0273|consen 332 -FATSS---------------TDGCIHVCKVG----------------EDRPVKTFIGHHGEVNALKWNPTGSLLASCSD 379 (524)
T ss_pred -EeecC---------------CCceEEEEEec----------------CCCcceeeecccCceEEEEECCCCceEEEecC
Confidence 44433 22245555542 56677788888888999999999998887776
Q ss_pred CCCCCCCC----------ccccceeEeeecCCCCC---------CCcccceeeeeeceecCCCCCcccc--ccCCCCCCc
Q 005093 281 KSSVDSGA----------HSATDSLHRIDWPTNGN---------FSSLEKIVDVIPVVQCAEGDCFPGL--YSSSILSNP 339 (715)
Q Consensus 281 ~~~~~~g~----------~~~~~~l~~~~~~~~~~---------~~lt~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~ 339 (715)
+.+..... +.-...||.+.+...+. ..++...+..+.+|+.......--+ +...+..++
T Consensus 380 D~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysva 459 (524)
T KOG0273|consen 380 DGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVA 459 (524)
T ss_pred CCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEE
Confidence 65432110 01113467666644221 2233444455666655443321111 334567888
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
|+|||+++ .+.+.++...| ++.++++..+-..+.+.+....|+.+|+.|....
T Consensus 460 fS~~g~yl-AsGs~dg~V~i--ws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~ 512 (524)
T KOG0273|consen 460 FSPNGRYL-ASGSLDGCVHI--WSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACA 512 (524)
T ss_pred ecCCCcEE-EecCCCCeeEe--ccccchheeEeecCCCeEEEEEEcCCCCEEEEEe
Confidence 99999855 44444554444 5777888888777766555567888887665544
No 193
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.68 E-value=6.8e-07 Score=98.19 Aligned_cols=157 Identities=18% Similarity=0.201 Sum_probs=94.8
Q ss_pred cccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCC-ccEEEEecCcccc---cc----c--cCCCcccceeecCCC
Q 005093 40 VEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQS-QLEKEFHVPQTVH---GS----V--YADGWFEGISWNSDE 108 (715)
Q Consensus 40 ~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~---~~----~--~~~~~~~~~~wSpDg 108 (715)
.+.+.+....|||||++||+-++. ++..+| ... -...+....++.+ .+ + --+.-+..+.||||+
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD-----~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~ 141 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDD-----RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDD 141 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCc-----ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCc
Confidence 345778999999999999987654 466667 221 0001110000000 00 0 001123789999999
Q ss_pred CeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccce
Q 005093 109 TLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQ 188 (715)
Q Consensus 109 ~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~ 188 (715)
.+|+-.+.+ +.|.+|+..+.+..... -.....+-.
T Consensus 142 ~~lvS~s~D--------------------------------------------nsViiwn~~tF~~~~vl-~~H~s~VKG 176 (942)
T KOG0973|consen 142 SLLVSVSLD--------------------------------------------NSVIIWNAKTFELLKVL-RGHQSLVKG 176 (942)
T ss_pred cEEEEeccc--------------------------------------------ceEEEEccccceeeeee-ecccccccc
Confidence 988876432 66889998887544431 222335668
Q ss_pred EEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc------c
Q 005093 189 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS------S 262 (715)
Q Consensus 189 ~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~------~ 262 (715)
+.|-|-|+. ++..+. + +.-.||+.+ +-+-.+.++++.. .
T Consensus 177 vs~DP~Gky----~ASqsd--D-----------rtikvwrt~------------------dw~i~k~It~pf~~~~~~T~ 221 (942)
T KOG0973|consen 177 VSWDPIGKY----FASQSD--D-----------RTLKVWRTS------------------DWGIEKSITKPFEESPLTTF 221 (942)
T ss_pred eEECCccCe----eeeecC--C-----------ceEEEEEcc------------------cceeeEeeccchhhCCCcce
Confidence 899999998 776652 1 222455543 4455566665533 3
Q ss_pred ccceeEcCCCCeEEEEecC
Q 005093 263 AFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~ 281 (715)
...++|||||++|+-.-.-
T Consensus 222 f~RlSWSPDG~~las~nA~ 240 (942)
T KOG0973|consen 222 FLRLSWSPDGHHLASPNAV 240 (942)
T ss_pred eeecccCCCcCeecchhhc
Confidence 6889999999999755443
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.68 E-value=1.5e-06 Score=82.49 Aligned_cols=133 Identities=14% Similarity=0.179 Sum_probs=76.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEE-EEcCCC---------CCCCchhh--
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLL-IVNYRG---------SLGFGEEA-- 528 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi-~~d~rG---------~~~~g~~~-- 528 (715)
.|...+.++..|+++.++.+||+|.++-|.... ..........+++.-..++ .+.|+. ...|-...
T Consensus 19 ~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~vf--~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~DyTp~~~~ 96 (264)
T COG2819 19 TGRKYRIFIATPKNYPKPGGYPVLYMLDGNAVF--NALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAYDYTPPSAN 96 (264)
T ss_pred CCcEEEEEecCCCCCCCCCCCcEEEEecchhhh--chHHHHhhhhhhcCCCceEEEeccccccccccccccccCCCCCCC
Confidence 456788899999998777779977766663221 1111112233333332222 233332 11111100
Q ss_pred --hhcC----CCCCCccc--hhhHHHHHH-HHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 529 --LQSL----PGKVGSQD--VNDVLTAID-HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 529 --~~~~----~~~~~~~~--~~d~~~~i~-~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.... ...-|..+ .+.+.+.+. ++.+...++.++.+|+|||+||.+++.++..+|+.|...+++||..
T Consensus 97 ~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 97 AIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 0000 01111111 222333333 3334456889999999999999999999999999999999999965
No 195
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=98.67 E-value=3.3e-06 Score=78.87 Aligned_cols=183 Identities=13% Similarity=0.100 Sum_probs=113.8
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEec--CCccEEEEecCcccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVH 90 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 90 (715)
.++..+.+.|+.++.. .. .|..+...+...++|||.++|.--+++ ....+|. ++..-.+.. ....
T Consensus 82 swD~~lrlWDl~~g~~-t~-----~f~GH~~dVlsva~s~dn~qivSGSrD-----kTiklwnt~g~ck~t~~~--~~~~ 148 (315)
T KOG0279|consen 82 SWDGTLRLWDLATGES-TR-----RFVGHTKDVLSVAFSTDNRQIVSGSRD-----KTIKLWNTLGVCKYTIHE--DSHR 148 (315)
T ss_pred cccceEEEEEecCCcE-EE-----EEEecCCceEEEEecCCCceeecCCCc-----ceeeeeeecccEEEEEec--CCCc
Confidence 3667788888988732 22 344444779999999999999755443 3456672 322222222 2223
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
+ |++.++|||.....++++.. -...+.+||++
T Consensus 149 ~------WVscvrfsP~~~~p~Ivs~s------------------------------------------~DktvKvWnl~ 180 (315)
T KOG0279|consen 149 E------WVSCVRFSPNESNPIIVSAS------------------------------------------WDKTVKVWNLR 180 (315)
T ss_pred C------cEEEEEEcCCCCCcEEEEcc------------------------------------------CCceEEEEccC
Confidence 3 45999999997444444321 12569999998
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
+-+.+..- ......+..+.+||||.. +++-. ..++++++|| +.
T Consensus 181 ~~~l~~~~-~gh~~~v~t~~vSpDGsl----casGg---------------kdg~~~LwdL-----------------~~ 223 (315)
T KOG0279|consen 181 NCQLRTTF-IGHSGYVNTVTVSPDGSL----CASGG---------------KDGEAMLWDL-----------------NE 223 (315)
T ss_pred Ccchhhcc-ccccccEEEEEECCCCCE----EecCC---------------CCceEEEEEc-----------------cC
Confidence 87766541 223345778899999996 65532 3457888898 33
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
++.-.-.+....+.+.+|||+-=+|+-.... .|.++|+.++..
T Consensus 224 ~k~lysl~a~~~v~sl~fspnrywL~~at~~------------sIkIwdl~~~~~ 266 (315)
T KOG0279|consen 224 GKNLYSLEAFDIVNSLCFSPNRYWLCAATAT------------SIKIWDLESKAV 266 (315)
T ss_pred CceeEeccCCCeEeeEEecCCceeEeeccCC------------ceEEEeccchhh
Confidence 3332223345568899999976555433322 377788777543
No 196
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=98.66 E-value=6e-06 Score=77.18 Aligned_cols=227 Identities=14% Similarity=0.081 Sum_probs=134.9
Q ss_pred ccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-c---CCccEEEEec-CccccccccCCCcccceeecCCCCeEEE
Q 005093 39 PVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-S---QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAY 113 (715)
Q Consensus 39 ~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~ 113 (715)
..+.+.+...+..+.+..+++.+.++ ....+|.+. + .|.+.+.+.. ..- ++....|+||.+.+-
T Consensus 12 ~gh~d~Vt~la~~~~~~~~l~sasrD-k~ii~W~L~~dd~~~G~~~r~~~GHsH~----------v~dv~~s~dg~~alS 80 (315)
T KOG0279|consen 12 EGHTDWVTALAIKIKNSDILVSASRD-KTIIVWKLTSDDIKYGVPVRRLTGHSHF----------VSDVVLSSDGNFALS 80 (315)
T ss_pred cCCCceEEEEEeecCCCceEEEcccc-eEEEEEEeccCccccCceeeeeeccceE----------ecceEEccCCceEEe
Confidence 33446788888888888888777765 333344443 2 2333433321 222 278899999975443
Q ss_pred EeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec
Q 005093 114 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp 193 (715)
.+ ....+.+||+.+|+.++.- .-....+..+++||
T Consensus 81 ~s--------------------------------------------wD~~lrlWDl~~g~~t~~f-~GH~~dVlsva~s~ 115 (315)
T KOG0279|consen 81 AS--------------------------------------------WDGTLRLWDLATGESTRRF-VGHTKDVLSVAFST 115 (315)
T ss_pred cc--------------------------------------------ccceEEEEEecCCcEEEEE-EecCCceEEEEecC
Confidence 21 1266999999998776541 22233577899999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC--CccccceeEcCC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--ISSAFFPRFSPD 271 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~--~~~~~~~~~spd 271 (715)
|+++ |+--+ ++..|-+++. .++-.-.+... ...+..++|||.
T Consensus 116 dn~q----ivSGS---------------rDkTiklwnt-----------------~g~ck~t~~~~~~~~WVscvrfsP~ 159 (315)
T KOG0279|consen 116 DNRQ----IVSGS---------------RDKTIKLWNT-----------------LGVCKYTIHEDSHREWVSCVRFSPN 159 (315)
T ss_pred CCce----eecCC---------------Ccceeeeeee-----------------cccEEEEEecCCCcCcEEEEEEcCC
Confidence 9999 77654 3335666664 33333334433 456888999999
Q ss_pred CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 272 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 272 g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
....++++... ...+.++|+.+-+.+.. |+| +......+..||||. +..+.
T Consensus 160 ~~~p~Ivs~s~---------DktvKvWnl~~~~l~~~------------------~~g-h~~~v~t~~vSpDGs-lcasG 210 (315)
T KOG0279|consen 160 ESNPIIVSASW---------DKTVKVWNLRNCQLRTT------------------FIG-HSGYVNTVTVSPDGS-LCASG 210 (315)
T ss_pred CCCcEEEEccC---------CceEEEEccCCcchhhc------------------ccc-ccccEEEEEECCCCC-EEecC
Confidence 64444444332 23478889887554221 111 112345677999998 55554
Q ss_pred eeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecC
Q 005093 352 IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDG 388 (715)
Q Consensus 352 ~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~ 388 (715)
..++ .++.+|++.++...-......+....|+|..
T Consensus 211 gkdg--~~~LwdL~~~k~lysl~a~~~v~sl~fspnr 245 (315)
T KOG0279|consen 211 GKDG--EAMLWDLNEGKNLYSLEAFDIVNSLCFSPNR 245 (315)
T ss_pred CCCc--eEEEEEccCCceeEeccCCCeEeeEEecCCc
Confidence 4444 5666777777765444444434444566543
No 197
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=98.66 E-value=3.6e-06 Score=84.99 Aligned_cols=282 Identities=13% Similarity=0.086 Sum_probs=150.2
Q ss_pred ccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCc-cEEEEe
Q 005093 6 QPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ-LEKEFH 84 (715)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~ 84 (715)
...+....++.++..+|+.+-...-.-+..- .+.+...+...+|||.|..|+.++.. .|.-+++..|. ..+...
T Consensus 179 GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l-~P~E~h~i~sl~ys~Tg~~iLvvsg~----aqakl~DRdG~~~~e~~K 253 (641)
T KOG0772|consen 179 GARFVSGSLDYTVKFWDFQGMDASMRSFRQL-QPCETHQINSLQYSVTGDQILVVSGS----AQAKLLDRDGFEIVEFSK 253 (641)
T ss_pred CceeeeccccceEEEEecccccccchhhhcc-CcccccccceeeecCCCCeEEEEecC----cceeEEccCCceeeeeec
Confidence 3455666777788888887655322111111 23445668899999999999888543 35555664443 222221
Q ss_pred cCccccccccCCC---cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccC
Q 005093 85 VPQTVHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQ 161 (715)
Q Consensus 85 ~~~~~~~~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 161 (715)
...-+.+...+-| .+..-.|.|+.+..+..+..+
T Consensus 254 GDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~D------------------------------------------- 290 (641)
T KOG0772|consen 254 GDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYD------------------------------------------- 290 (641)
T ss_pred cchhhhhhhccCCceeeeeccccccCcccceEEecCC-------------------------------------------
Confidence 1111111111111 235667999988876654432
Q ss_pred ceEEEEEccCCc--eEeec---CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccc
Q 005093 162 PSLFVININSGE--VQAVK---GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 236 (715)
Q Consensus 162 ~~l~~~~~~~g~--~~~l~---~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 236 (715)
..|.+|+++.-+ .+.+. .....+.+....|+|||+. |+-.. .++ .|-.++..
T Consensus 291 gtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~----iAagc-------------~DG--SIQ~W~~~---- 347 (641)
T KOG0772|consen 291 GTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKL----IAAGC-------------LDG--SIQIWDKG---- 347 (641)
T ss_pred CcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcch----hhhcc-------------cCC--ceeeeecC----
Confidence 457777775432 22222 1223446778899999998 76543 112 23333320
Q ss_pred hhhhhhhhccCCCCCC----ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccce
Q 005093 237 EASELELKESSSEDLP----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI 312 (715)
Q Consensus 237 ~~~~~~~~~~~~~~~~----~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~ 312 (715)
..+.. ++........+..++||+||++|+-.+.++ .|-++||..-+. .|-..
T Consensus 348 -----------~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~-----------tLKvWDLrq~kk-pL~~~- 403 (641)
T KOG0772|consen 348 -----------SRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD-----------TLKVWDLRQFKK-PLNVR- 403 (641)
T ss_pred -----------CcccccceEeeeccCCCCceeEEEeccccchhhhccCCC-----------ceeeeecccccc-chhhh-
Confidence 01111 111122233588899999999997655553 377888765322 11100
Q ss_pred eeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee--C--CeeEEEEEECCCCc-EEEecCCCCCceeEEEeec
Q 005093 313 VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--G--SSQVIISVNVSSGE-LLRITPAESNFSWSLLTLD 387 (715)
Q Consensus 313 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~--~--~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~~ 387 (715)
..+ ...| ...+.+||||.+ |+++... . ....|+.+|..|-. +.+|.-....+....|.+.
T Consensus 404 ---tgL-----~t~~------~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whpk 468 (641)
T KOG0772|consen 404 ---TGL-----PTPF------PGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPK 468 (641)
T ss_pred ---cCC-----CccC------CCCccccCCCce-EEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecch
Confidence 000 0112 235789999987 4454431 1 23469999876643 3444444333333456666
Q ss_pred CCEEEEEEeC
Q 005093 388 GDNIIAVSSS 397 (715)
Q Consensus 388 ~~~l~~~~~~ 397 (715)
=++|++...+
T Consensus 469 LNQi~~gsgd 478 (641)
T KOG0772|consen 469 LNQIFAGSGD 478 (641)
T ss_pred hhheeeecCC
Confidence 6666654433
No 198
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.66 E-value=1.5e-06 Score=93.60 Aligned_cols=280 Identities=14% Similarity=0.128 Sum_probs=154.1
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
..+....+||||+.++...... +..+| .+++. .+.....+... .+..+.|||||+.|+-.+.+...
T Consensus 160 ~sv~~~~fs~~g~~l~~~~~~~-----~i~~~~~~~~~~-~~~~~l~~h~~------~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 160 PSVTCVDFSPDGRALAAASSDG-----LIRIWKLEGIKS-NLLRELSGHTR------GVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred CceEEEEEcCCCCeEEEccCCC-----cEEEeecccccc-hhhcccccccc------ceeeeEECCCCcEEEEecCCceE
Confidence 4467789999999988875542 44455 22221 11111112211 23799999999988777666544
Q ss_pred CCCCccC-CCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCC
Q 005093 121 SKPTFSL-GSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 121 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
+ .|.. ..............+.....|.++. ..+ .......+.+||+.+++....- ......+...+|++||..
T Consensus 228 r--iwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l-~~hs~~is~~~f~~d~~~- 302 (456)
T KOG0266|consen 228 R--IWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKL-KGHSDGISGLAFSPDGNL- 302 (456)
T ss_pred E--EeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEee-eccCCceEEEEECCCCCE-
Confidence 3 2332 1112223333455556667777774 333 3334588999999998765541 233346778899999997
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc---eecCCCCc--cccceeEcCCCC
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESIS--SAFFPRFSPDGK 273 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~--~~~~~~~spdg~ 273 (715)
|+-.. .++.|.++|+ .++.. ..+..... ......|||+|+
T Consensus 303 ---l~s~s---------------~d~~i~vwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~ 347 (456)
T KOG0266|consen 303 ---LVSAS---------------YDGTIRVWDL-----------------ETGSKLCLKLLSGAENSAPVTSVQFSPNGK 347 (456)
T ss_pred ---EEEcC---------------CCccEEEEEC-----------------CCCceeeeecccCCCCCCceeEEEECCCCc
Confidence 66553 2236778886 55662 23433333 468899999999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+|+-...+. .|-.+|+..+.... ........ .....+..+++++.+ ++..
T Consensus 348 ~ll~~~~d~-----------~~~~w~l~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i-~sg~ 398 (456)
T KOG0266|consen 348 YLLSASLDR-----------TLKLWDLRSGKSVGTYTGHSNLV-----------------RCIFSPTLSTGGKLI-YSGS 398 (456)
T ss_pred EEEEecCCC-----------eEEEEEccCCcceeeecccCCcc-----------------eeEecccccCCCCeE-EEEe
Confidence 887555442 46677777654311 11111000 012233346677744 4444
Q ss_pred eCCeeEEEEEECCCCcEEEecCCC--CCceeEEEeecCCEEEEEEeCCCCCCeEE
Q 005093 353 WGSSQVIISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVK 405 (715)
Q Consensus 353 ~~~~~~l~~~d~~tg~~~~l~~~~--~~~~~~~~s~~~~~l~~~~~~~~~p~~l~ 405 (715)
.+ ..++.+|+.++......... ..+....+.+..+.++......+....++
T Consensus 399 ~d--~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w 451 (456)
T KOG0266|consen 399 ED--GSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLW 451 (456)
T ss_pred CC--ceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEe
Confidence 33 36777788766555443333 22222344444444444333344444443
No 199
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=1.9e-05 Score=75.40 Aligned_cols=252 Identities=13% Similarity=0.051 Sum_probs=128.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecC-ccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
+.+....+|+||..|+-.++. +.-++|.. ..|...+.+... .++ .-..|.-....+.+.++.....
T Consensus 15 ~~i~sl~fs~~G~~litss~d--Dsl~LYd~-~~g~~~~ti~skkyG~----------~~~~Fth~~~~~i~sStk~d~t 81 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITSSED--DSLRLYDS-LSGKQVKTINSKKYGV----------DLACFTHHSNTVIHSSTKEDDT 81 (311)
T ss_pred CceeEEEecCCCCEEEEecCC--CeEEEEEc-CCCceeeEeecccccc----------cEEEEecCCceEEEccCCCCCc
Confidence 568899999999999864443 33333333 344444444332 243 4555555555566655422222
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccC-ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQ-PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
..+..+...+-..-.......+..+.-.|. ++.+..... .+|.+||+...+-+-+. .. ....-++|.|+|
T Consensus 82 IryLsl~dNkylRYF~GH~~~V~sL~~sP~-~d~FlS~S~D~tvrLWDlR~~~cqg~l--~~-~~~pi~AfDp~G----- 152 (311)
T KOG1446|consen 82 IRYLSLHDNKYLRYFPGHKKRVNSLSVSPK-DDTFLSSSLDKTVRLWDLRVKKCQGLL--NL-SGRPIAAFDPEG----- 152 (311)
T ss_pred eEEEEeecCceEEEcCCCCceEEEEEecCC-CCeEEecccCCeEEeeEecCCCCceEE--ec-CCCcceeECCCC-----
Confidence 222222221111111111111222222222 233333333 68999999866654441 11 122245788887
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC---CCccccceeEcCCCCeEEE
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE---SISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~---~~~~~~~~~~spdg~~l~~ 277 (715)
|+|+..... ..|-++|+-. .+.|..+...- .........||||||.|+.
T Consensus 153 -LifA~~~~~-------------~~IkLyD~Rs--------------~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLl 204 (311)
T KOG1446|consen 153 -LIFALANGS-------------ELIKLYDLRS--------------FDKGPFTTFSITDNDEAEWTDLEFSPDGKSILL 204 (311)
T ss_pred -cEEEEecCC-------------CeEEEEEecc--------------cCCCCceeEccCCCCccceeeeEEcCCCCEEEE
Confidence 566553221 1466666510 12344443332 2334678999999999987
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
..+.. .++++|--.|..+. ++... .... ......|+||++.| +....++
T Consensus 205 sT~~s-----------~~~~lDAf~G~~~~tfs~~~----------~~~~-------~~~~a~ftPds~Fv-l~gs~dg- 254 (311)
T KOG1446|consen 205 STNAS-----------FIYLLDAFDGTVKSTFSGYP----------NAGN-------LPLSATFTPDSKFV-LSGSDDG- 254 (311)
T ss_pred EeCCC-----------cEEEEEccCCcEeeeEeecc----------CCCC-------cceeEEECCCCcEE-EEecCCC-
Confidence 77653 37888865544211 11000 0000 11356799999855 4555445
Q ss_pred eEEEEEECCCCcEEEecCC
Q 005093 357 QVIISVNVSSGELLRITPA 375 (715)
Q Consensus 357 ~~l~~~d~~tg~~~~l~~~ 375 (715)
+|..|++++|...-...+
T Consensus 255 -~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 255 -TIHVWNLETGKKVAVLRG 272 (311)
T ss_pred -cEEEEEcCCCcEeeEecC
Confidence 555566678877665554
No 200
>PTZ00421 coronin; Provisional
Probab=98.64 E-value=5.9e-06 Score=88.96 Aligned_cols=180 Identities=12% Similarity=0.055 Sum_probs=99.0
Q ss_pred ceEEEEEccCCce--------EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccc
Q 005093 162 PSLFVININSGEV--------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 233 (715)
Q Consensus 162 ~~l~~~~~~~g~~--------~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 233 (715)
..|.+||+.++.. ..+ ......+..+.|+|++.. ++.++.. +..|.++|+
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L--~gH~~~V~~l~f~P~~~~----iLaSgs~--------------DgtVrIWDl-- 155 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHL--QGHTKKVGIVSFHPSAMN----VLASAGA--------------DMVVNVWDV-- 155 (493)
T ss_pred CEEEEEecCCCccccccCcceEEe--cCCCCcEEEEEeCcCCCC----EEEEEeC--------------CCEEEEEEC--
Confidence 5688888865421 223 122345678999999876 6666532 235777786
Q ss_pred ccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccc
Q 005093 234 YKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEK 311 (715)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~ 311 (715)
.+++ ...+......+....|+|||+.|+..+.+. .|.++|+.+++... +..
T Consensus 156 ---------------~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg-----------~IrIwD~rsg~~v~tl~~- 208 (493)
T PTZ00421 156 ---------------ERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDK-----------KLNIIDPRDGTIVSSVEA- 208 (493)
T ss_pred ---------------CCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCC-----------EEEEEECCCCcEEEEEec-
Confidence 4443 344555566788999999999887665442 48888887654310 000
Q ss_pred eeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCc-EEE-ecCCC-CCceeEEEeec
Q 005093 312 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGE-LLR-ITPAE-SNFSWSLLTLD 387 (715)
Q Consensus 312 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-~~~~~l~~~d~~tg~-~~~-l~~~~-~~~~~~~~s~~ 387 (715)
... .......|.+++..++..... .....+..+|+.+.. ... +.... .......++++
T Consensus 209 -----------H~~-------~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d 270 (493)
T PTZ00421 209 -----------HAS-------AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDED 270 (493)
T ss_pred -----------CCC-------CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCC
Confidence 000 011245688887766544322 223456677876533 221 11111 12233456777
Q ss_pred CCEEEEEEeCCCCCCeEEEEeecc
Q 005093 388 GDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 388 ~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
++.++....+- ..|.+.++.+
T Consensus 271 ~~~L~lggkgD---g~Iriwdl~~ 291 (493)
T PTZ00421 271 TNLLYIGSKGE---GNIRCFELMN 291 (493)
T ss_pred CCEEEEEEeCC---CeEEEEEeeC
Confidence 77665543222 2366666543
No 201
>PRK10115 protease 2; Provisional
Probab=98.63 E-value=7.2e-06 Score=92.42 Aligned_cols=252 Identities=12% Similarity=0.072 Sum_probs=139.4
Q ss_pred CCCceEEEEecCCCCCCeEEEEe-c-C---CccEEEEecCcc-ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 005093 52 PSGSKLLVVRNPENESPIQFELW-S-Q---SQLEKEFHVPQT-VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 125 (715)
Q Consensus 52 pdg~~la~~~~~~~~~~~~~~~~-~-~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 125 (715)
..|.++.|.....+....+|... . + +..+-+++...- ..+. .-.+..+.|||||++|+|..+..
T Consensus 79 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~llD~n~~a~~~~---~~~l~~~~~Spdg~~la~~~d~~------- 148 (686)
T PRK10115 79 IKNGYRYRHIYEPGCEYAIYQRQSAFSEEWDEWETLLDANKRAAHSE---FYTLGGMAITPDNTIMALAEDFL------- 148 (686)
T ss_pred EECCEEEEEEEcCCCccEEEEEecCCCCCCCCCEEEEcchhhccCCC---cEEEeEEEECCCCCEEEEEecCC-------
Confidence 46788888776554444444433 1 1 222344443211 1101 01346889999999999986543
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc--eEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 126 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~--~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
|. ...+|++.|+++|+ ...+. ... ..+.|++||+. |+
T Consensus 149 ---------------------------G~-----E~~~l~v~d~~tg~~l~~~i~----~~~-~~~~w~~D~~~----~~ 187 (686)
T PRK10115 149 ---------------------------SR-----RQYGIRFRNLETGNWYPELLD----NVE-PSFVWANDSWT----FY 187 (686)
T ss_pred ---------------------------Cc-----EEEEEEEEECCCCCCCCcccc----Ccc-eEEEEeeCCCE----EE
Confidence 22 35889999999997 33331 112 45899999999 99
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC--CceecCCC-Ccccc-ceeEcCCCCeEEEEe
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTES-ISSAF-FPRFSPDGKFLVFLS 279 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lt~~-~~~~~-~~~~spdg~~l~~~~ 279 (715)
|+..... ..++.+||++++ .++ +-+.+..+ ..... ....+.|+++++..+
T Consensus 188 y~~~~~~---------~~~~~~v~~h~l-----------------gt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~ 241 (686)
T PRK10115 188 YVRKHPV---------TLLPYQVWRHTI-----------------GTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHL 241 (686)
T ss_pred EEEecCC---------CCCCCEEEEEEC-----------------CCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEE
Confidence 9885321 014468999998 555 33444443 22222 223355999987555
Q ss_pred cCCCCCCCCccccceeEeeec--CCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee-CCe
Q 005093 280 AKSSVDSGAHSATDSLHRIDW--PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSS 356 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~--~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-~~~ 356 (715)
... ....+++++. .++..+.+... ..+.. +.....+..+++.++. ...
T Consensus 242 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~-----------~~~~~~~~~ly~~tn~~~~~ 292 (686)
T PRK10115 242 ASA--------TTSEVLLLDAELADAEPFVFLPR----------RKDHE-----------YSLDHYQHRFYLRSNRHGKN 292 (686)
T ss_pred ECC--------ccccEEEEECcCCCCCceEEEEC----------CCCCE-----------EEEEeCCCEEEEEEcCCCCC
Confidence 543 1235666663 33222111110 00110 0111123567777764 456
Q ss_pred eEEEEEECC-CCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 357 QVIISVNVS-SGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 357 ~~l~~~d~~-tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
..|+.+++. +++.+.+...........+...++.|+++......+. ++.++..
T Consensus 293 ~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~-l~~~~~~ 346 (686)
T PRK10115 293 FGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTS-LRQINRK 346 (686)
T ss_pred ceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEE-EEEEcCC
Confidence 679999987 5666677666332333455555777777665444433 6666654
No 202
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.63 E-value=1.5e-07 Score=90.19 Aligned_cols=172 Identities=19% Similarity=0.170 Sum_probs=81.7
Q ss_pred CCcEEEEEcCCCCCCCCccchH----HHHHHHhCCcEEEEEcCCCCC--CCchh---------h-hhcCCCCCCc-----
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSK----SLAFLSSVGYSLLIVNYRGSL--GFGEE---------A-LQSLPGKVGS----- 538 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~----~~~~la~~G~~vi~~d~rG~~--~~g~~---------~-~~~~~~~~~~----- 538 (715)
+.+-||++||.+.+ ..-+.. +...|.+.++..+.+|-+-.. +.+-. . .......|..
T Consensus 3 ~k~riLcLHG~~~n--a~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQN--AEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcC--HHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 46779999996554 334443 333444448999988844211 01000 0 0011111211
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC--------CCceeEEEecCCcchhhhhccCCCCCCce
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLCNLALMVGTTDIPDWC 610 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 610 (715)
....++.+++++|.+.-.-...=.+|+|+|.||.+|+.++... ...++.+|+++++......
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred ccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 1244455555555442100111358999999999999887532 2357889988886421100
Q ss_pred eeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCC
Q 005093 611 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 690 (715)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 690 (715)
........++++|+|.++|++|.+++.+.+..+++..... .+++..++ |
T Consensus 151 ---------------------------~~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-G 199 (212)
T PF03959_consen 151 ---------------------------YQELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-G 199 (212)
T ss_dssp ---------------------------GTTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-S
T ss_pred ---------------------------hhhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-C
Confidence 0000123457899999999999999998999999988764 66777765 7
Q ss_pred ccCC
Q 005093 691 HGIE 694 (715)
Q Consensus 691 H~~~ 694 (715)
|.+.
T Consensus 200 H~vP 203 (212)
T PF03959_consen 200 HHVP 203 (212)
T ss_dssp SS--
T ss_pred CcCc
Confidence 8664
No 203
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.63 E-value=5.2e-07 Score=92.95 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=54.9
Q ss_pred ccCCC-CcEEEEeeCCCCcCCchHHHHHHHHHHHcC-CcEEEEEeCCCCcc--CCCCCchHHHHHHHHHHHHHh
Q 005093 644 ISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKG-VETKVIVFPNDVHG--IERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 644 ~~~i~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+.+|+ +|+|.+.|+.|.++|+.++..+.+.....+ ...+.+..+++||. |.....+.+.+..|.+||.++
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 45788 999999999999999999998887653322 23456777789995 455677778899999999864
No 204
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=98.62 E-value=1.1e-06 Score=81.09 Aligned_cols=210 Identities=12% Similarity=0.029 Sum_probs=116.7
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (715)
-.....|.++|+-.+.. +.-+... +..-...|||||.++++..+.+ .+-.++ ..-+.....+...-+
T Consensus 83 as~dk~ir~wd~r~~k~--~~~i~~~-----~eni~i~wsp~g~~~~~~~kdD----~it~id~r~~~~~~~~~~~~e~- 150 (313)
T KOG1407|consen 83 ASGDKTIRIWDIRSGKC--TARIETK-----GENINITWSPDGEYIAVGNKDD----RITFIDARTYKIVNEEQFKFEV- 150 (313)
T ss_pred ecCCceEEEEEeccCcE--EEEeecc-----CcceEEEEcCCCCEEEEecCcc----cEEEEEecccceeehhccccee-
Confidence 33455666666655543 2222223 5677889999999999886554 333344 222222111212222
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
..+.|+-++ .++|+.+.- +.-+|.-++ .
T Consensus 151 ---------ne~~w~~~n-d~Fflt~Gl-----------------------------------------G~v~ILsyp-s 178 (313)
T KOG1407|consen 151 ---------NEISWNNSN-DLFFLTNGL-----------------------------------------GCVEILSYP-S 178 (313)
T ss_pred ---------eeeeecCCC-CEEEEecCC-----------------------------------------ceEEEEecc-c
Confidence 578898544 577764421 123344443 1
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
-..++.| ........-..|+|+|+. ++.-+. +..+-+.|++ +-
T Consensus 179 Lkpv~si--~AH~snCicI~f~p~Gry----fA~GsA---------------DAlvSLWD~~----------------EL 221 (313)
T KOG1407|consen 179 LKPVQSI--KAHPSNCICIEFDPDGRY----FATGSA---------------DALVSLWDVD----------------EL 221 (313)
T ss_pred ccccccc--ccCCcceEEEEECCCCce----Eeeccc---------------cceeeccChh----------------Hh
Confidence 2233334 222333446789999998 765431 1123333431 33
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccc
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 330 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~ 330 (715)
-=.+.++..+..++.++||.||++||-.+.+. -|-..+..+|... ++ .+-
T Consensus 222 iC~R~isRldwpVRTlSFS~dg~~lASaSEDh-----------~IDIA~vetGd~~------~e------I~~------- 271 (313)
T KOG1407|consen 222 ICERCISRLDWPVRTLSFSHDGRMLASASEDH-----------FIDIAEVETGDRV------WE------IPC------- 271 (313)
T ss_pred hhheeeccccCceEEEEeccCcceeeccCccc-----------eEEeEecccCCeE------EE------eec-------
Confidence 44567788888999999999999999777663 1344455554431 00 000
Q ss_pred ccCCCCCCccccCCCEEEEEeee
Q 005093 331 YSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 331 ~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
......++|.|....|.|..++
T Consensus 272 -~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 272 -EGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred -cCCceeEEecCCCceeeEEecC
Confidence 0134578899987766666553
No 205
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.62 E-value=2.4e-06 Score=85.81 Aligned_cols=256 Identities=14% Similarity=0.138 Sum_probs=132.4
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
...++++++..... ...+. .+...+....|+|+++.|+.....+ .+.... .+++.........
T Consensus 30 ~g~i~i~~~~~~~~-~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~~~----~i~i~~~~~~~~~~~~~~~~------ 93 (289)
T cd00200 30 DGTIKVWDLETGEL-LRTLK-----GHTGPVRDVAASADGTYLASGSSDK----TIRLWDLETGECVRTLTGHT------ 93 (289)
T ss_pred CcEEEEEEeeCCCc-EEEEe-----cCCcceeEEEECCCCCEEEEEcCCC----eEEEEEcCcccceEEEeccC------
Confidence 44566666665431 12221 1224456889999998888775532 333222 3322222222111
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCcc-CceEEEEEccCC
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKR-QPSLFVININSG 172 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~~~~g 172 (715)
..+..+.|+|+++.|+....... ...+....................+.+.++ +..+.... ...|++||+.++
T Consensus 94 ---~~i~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~ 167 (289)
T cd00200 94 ---SYVSSVAFSPDGRILSSSSRDKT--IKVWDVETGKCLTTLRGHTDWVNSVAFSPD-GTFVASSSQDGTIKLWDLRTG 167 (289)
T ss_pred ---CcEEEEEEcCCCCEEEEecCCCe--EEEEECCCcEEEEEeccCCCcEEEEEEcCc-CCEEEEEcCCCcEEEEEcccc
Confidence 11278999999765554432221 111221111111111111222334445554 33333333 578999999876
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
+..... ......+..+.|+|+++. +++.+. ...|..+|+ ..+.
T Consensus 168 ~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~~---------------~~~i~i~d~-----------------~~~~ 210 (289)
T cd00200 168 KCVATL-TGHTGEVNSVAFSPDGEK----LLSSSS---------------DGTIKLWDL-----------------STGK 210 (289)
T ss_pred ccceeE-ecCccccceEEECCCcCE----EEEecC---------------CCcEEEEEC-----------------CCCc
Confidence 654331 222335778999999987 777652 236778886 4333
Q ss_pred c-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 253 V-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 253 ~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
. ..+......+..+.|+|+++.++..+.+ ..|+++++.+++....... .
T Consensus 211 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------~~i~i~~~~~~~~~~~~~~-------------------~ 260 (289)
T cd00200 211 CLGTLRGHENGVNSVAFSPDGYLLASGSED-----------GTIRVWDLRTGECVQTLSG-------------------H 260 (289)
T ss_pred eecchhhcCCceEEEEEcCCCcEEEEEcCC-----------CcEEEEEcCCceeEEEccc-------------------c
Confidence 3 3333445577889999997655443322 2488888775433111100 0
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
...+..+.|+++++.+ ++...++...+|
T Consensus 261 ~~~i~~~~~~~~~~~l-~~~~~d~~i~iw 288 (289)
T cd00200 261 TNSVTSLAWSPDGKRL-ASGSADGTIRIW 288 (289)
T ss_pred CCcEEEEEECCCCCEE-EEecCCCeEEec
Confidence 1134567799998755 444444444444
No 206
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.60 E-value=1.4e-05 Score=83.11 Aligned_cols=262 Identities=15% Similarity=0.105 Sum_probs=129.1
Q ss_pred EEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 005093 47 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 125 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 125 (715)
...+||||++++. .+++ + .+-.++ ..++..+.+...... .++++||||++|+.....
T Consensus 41 ~~~~s~Dgr~~yv-~~rd-g--~vsviD~~~~~~v~~i~~G~~~----------~~i~~s~DG~~~~v~n~~-------- 98 (369)
T PF02239_consen 41 GLKFSPDGRYLYV-ANRD-G--TVSVIDLATGKVVATIKVGGNP----------RGIAVSPDGKYVYVANYE-------- 98 (369)
T ss_dssp EEE-TT-SSEEEE-EETT-S--EEEEEETTSSSEEEEEE-SSEE----------EEEEE--TTTEEEEEEEE--------
T ss_pred EEEecCCCCEEEE-EcCC-C--eEEEEECCcccEEEEEecCCCc----------ceEEEcCCCCEEEEEecC--------
Confidence 3578999998655 4443 2 566677 556655555554444 689999999998765432
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC------CCCccceEEEecCCCCCc
Q 005093 126 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP------KSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~------~~~~~~~~~~spdg~~~~ 199 (715)
.+++.++|.++.++.....+. .........-||+.+.
T Consensus 99 -----------------------------------~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~-- 141 (369)
T PF02239_consen 99 -----------------------------------PGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPE-- 141 (369)
T ss_dssp -----------------------------------TTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSE--
T ss_pred -----------------------------------CCceeEeccccccceeecccccccccccCCCceeEEecCCCCE--
Confidence 267999999887765431011 1112334556777776
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCCCccccceeEcCCCCeEEEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~spdg~~l~~~ 278 (715)
++++.. ...+||.+|.. ...... ..........+..|+|||++++-.
T Consensus 142 --fVv~lk--------------d~~~I~vVdy~----------------d~~~~~~~~i~~g~~~~D~~~dpdgry~~va 189 (369)
T PF02239_consen 142 --FVVNLK--------------DTGEIWVVDYS----------------DPKNLKVTTIKVGRFPHDGGFDPDGRYFLVA 189 (369)
T ss_dssp --EEEEET--------------TTTEEEEEETT----------------TSSCEEEEEEE--TTEEEEEE-TTSSEEEEE
T ss_pred --EEEEEc--------------cCCeEEEEEec----------------cccccceeeecccccccccccCcccceeeec
Confidence 666542 22489999961 222111 111222345678999999988665
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCccc---ceee----------eeeceecCCCCCc-------------c-ccc
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE---KIVD----------VIPVVQCAEGDCF-------------P-GLY 331 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~---~~~~----------~~~~~~~~~~~~~-------------~-g~~ 331 (715)
.+.. ..|-++|..+++...+.. .... .-+.|.......+ + ..|
T Consensus 190 ~~~s----------n~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w 259 (369)
T PF02239_consen 190 ANGS----------NKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW 259 (369)
T ss_dssp EGGG----------TEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT
T ss_pred cccc----------ceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcC
Confidence 4432 234455544432211100 0000 0001111110000 0 001
Q ss_pred c--------CCCCCCccccCCCEEEEEee-eCCeeEEEEEECCCCcEE-EecCCCC-CceeEEEeecCCEEEEEEeCCCC
Q 005093 332 S--------SSILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELL-RITPAES-NFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 332 ~--------~~~~~~~~~~dg~~l~~~~~-~~~~~~l~~~d~~tg~~~-~l~~~~~-~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
. .+...+.-+||++++++... ......|..+|.++-+.. .+....+ -.....|+++|.+++++.-....
T Consensus 260 kvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~ 339 (369)
T PF02239_consen 260 KVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNG 339 (369)
T ss_dssp SEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TT
T ss_pred eEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCC
Confidence 0 11123345899998888622 334668999999887654 4443222 13346899999999987755444
Q ss_pred CCeEEEEeecc
Q 005093 401 VPQVKYGYFVD 411 (715)
Q Consensus 401 p~~l~~~~~~~ 411 (715)
+|.++|..+
T Consensus 340 --~i~v~D~~T 348 (369)
T PF02239_consen 340 --AIVVYDAKT 348 (369)
T ss_dssp --EEEEEETTT
T ss_pred --EEEEEECCC
Confidence 788888543
No 207
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=98.60 E-value=3.9e-07 Score=86.67 Aligned_cols=142 Identities=18% Similarity=0.175 Sum_probs=95.0
Q ss_pred EEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 005093 47 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 125 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 125 (715)
.-.+||+|++||..++. ++...+ .+=+..++..+-..+ ..+-|+.|.-+|+.++..
T Consensus 13 ~c~fSp~g~yiAs~~~y-----rlviRd~~tlq~~qlf~cldki----------~yieW~ads~~ilC~~yk-------- 69 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-----RLVIRDSETLQLHQLFLCLDKI----------VYIEWKADSCHILCVAYK-------- 69 (447)
T ss_pred ceeECCCCCeeeeeeee-----EEEEeccchhhHHHHHHHHHHh----------hheeeeccceeeeeeeec--------
Confidence 45899999999987543 232222 121222222221222 689999999999887543
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEE
Q 005093 126 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFV 205 (715)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~ 205 (715)
++.+.+|++.-.+-..-. ..+..+....+|||||+. |+..
T Consensus 70 -----------------------------------~~~vqvwsl~Qpew~ckI-deg~agls~~~WSPdgrh----iL~t 109 (447)
T KOG4497|consen 70 -----------------------------------DPKVQVWSLVQPEWYCKI-DEGQAGLSSISWSPDGRH----ILLT 109 (447)
T ss_pred -----------------------------------cceEEEEEeecceeEEEe-ccCCCcceeeeECCCcce----Eeee
Confidence 267999999776655331 455567778999999999 8877
Q ss_pred eecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 206 GWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 206 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
+. .+.+|-+..| .+....-+.-+.......+|.|||++.+..+.++
T Consensus 110 se--------------F~lriTVWSL-----------------~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 110 SE--------------FDLRITVWSL-----------------NTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred ec--------------ceeEEEEEEe-----------------ccceeEEecccccCceeEEECCCCceeeeeeccc
Confidence 62 2235666665 5555555655556668899999999999888774
No 208
>PTZ00421 coronin; Provisional
Probab=98.57 E-value=1.3e-05 Score=86.36 Aligned_cols=217 Identities=12% Similarity=0.047 Sum_probs=119.5
Q ss_pred ccccceEEeeCC-CCceEEEEecCCCCCCeEEEEecCCcc----EEEEecCccccccccCCCcccceeecCCCCeEEEEe
Q 005093 41 EMTGASAVVPSP-SGSKLLVVRNPENESPIQFELWSQSQL----EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 41 ~~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
+.+.+...+||| |++.||..+.+ +.-.+|.+..++.. ..+..+. +... .+..+.|+|++..++..+
T Consensus 74 H~~~V~~v~fsP~d~~~LaSgS~D--gtIkIWdi~~~~~~~~~~~~l~~L~-gH~~------~V~~l~f~P~~~~iLaSg 144 (493)
T PTZ00421 74 QEGPIIDVAFNPFDPQKLFTASED--GTIMGWGIPEEGLTQNISDPIVHLQ-GHTK------KVGIVSFHPSAMNVLASA 144 (493)
T ss_pred CCCCEEEEEEcCCCCCEEEEEeCC--CEEEEEecCCCccccccCcceEEec-CCCC------cEEEEEeCcCCCCEEEEE
Confidence 446789999999 88888766543 33334444332211 1122221 1112 237899999976555543
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
.. ...|.+||+++++..... ......+..++|+|||
T Consensus 145 s~-------------------------------------------DgtVrIWDl~tg~~~~~l-~~h~~~V~sla~spdG 180 (493)
T PTZ00421 145 GA-------------------------------------------DMVVNVWDVERGKAVEVI-KCHSDQITSLEWNLDG 180 (493)
T ss_pred eC-------------------------------------------CCEEEEEECCCCeEEEEE-cCCCCceEEEEEECCC
Confidence 21 266999999988754331 2233457789999999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCcc-ccceeEcCCCC
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISS-AFFPRFSPDGK 273 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~-~~~~~~spdg~ 273 (715)
+. |+..+ .+..|.++|+ .++. ...+..+.+. .....|++++.
T Consensus 181 ~l----Latgs---------------~Dg~IrIwD~-----------------rsg~~v~tl~~H~~~~~~~~~w~~~~~ 224 (493)
T PTZ00421 181 SL----LCTTS---------------KDKKLNIIDP-----------------RDGTIVSSVEAHASAKSQRCLWAKRKD 224 (493)
T ss_pred CE----EEEec---------------CCCEEEEEEC-----------------CCCcEEEEEecCCCCcceEEEEcCCCC
Confidence 86 66554 2236778886 4333 3334333332 34578999988
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
.|+-+.... .....|.++|+..... .+.... . +. . .....+.|++|++.++..+..
T Consensus 225 ~ivt~G~s~-------s~Dr~VklWDlr~~~~-p~~~~~--------~--d~-~-----~~~~~~~~d~d~~~L~lggkg 280 (493)
T PTZ00421 225 LIITLGCSK-------SQQRQIMLWDTRKMAS-PYSTVD--------L--DQ-S-----SALFIPFFDEDTNLLYIGSKG 280 (493)
T ss_pred eEEEEecCC-------CCCCeEEEEeCCCCCC-ceeEec--------c--CC-C-----CceEEEEEcCCCCEEEEEEeC
Confidence 776554332 1234688888765332 111000 0 00 0 012234578899866655433
Q ss_pred CCeeEEEEEECCCCcEEEe
Q 005093 354 GSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 354 ~~~~~l~~~d~~tg~~~~l 372 (715)
++ .|..+|+.+++....
T Consensus 281 Dg--~Iriwdl~~~~~~~~ 297 (493)
T PTZ00421 281 EG--NIRCFELMNERLTFC 297 (493)
T ss_pred CC--eEEEEEeeCCceEEE
Confidence 34 455556666664443
No 209
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.54 E-value=6.6e-05 Score=73.37 Aligned_cols=213 Identities=15% Similarity=0.094 Sum_probs=127.3
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
+.+.|+|+++.|+-+...... ..-.-|.+|.+.|+++.+..
T Consensus 43 tyl~~~~~~~~LY~v~~~~~~---------------------------------------ggvaay~iD~~~G~Lt~ln~ 83 (346)
T COG2706 43 TYLAVNPDQRHLYVVNEPGEE---------------------------------------GGVAAYRIDPDDGRLTFLNR 83 (346)
T ss_pred ceEEECCCCCEEEEEEecCCc---------------------------------------CcEEEEEEcCCCCeEEEeec
Confidence 799999999988776544211 22456778877788887741
Q ss_pred C-CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec--
Q 005093 180 I-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-- 256 (715)
Q Consensus 180 ~-~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-- 256 (715)
. ........++.++||+ ++|+++-.. ..|-++.+. +.|....+
T Consensus 84 ~~~~g~~p~yvsvd~~g~-----~vf~AnY~~-------------g~v~v~p~~----------------~dG~l~~~v~ 129 (346)
T COG2706 84 QTLPGSPPCYVSVDEDGR-----FVFVANYHS-------------GSVSVYPLQ----------------ADGSLQPVVQ 129 (346)
T ss_pred cccCCCCCeEEEECCCCC-----EEEEEEccC-------------ceEEEEEcc----------------cCCcccccee
Confidence 1 1112336788999998 677764322 123333330 11221111
Q ss_pred -CCC----------CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCC
Q 005093 257 -TES----------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD 325 (715)
Q Consensus 257 -t~~----------~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~ 325 (715)
... ........+.|||++|+...-. ..+++++++..+.....+... +
T Consensus 130 ~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG----------~Dri~~y~~~dg~L~~~~~~~-----v------- 187 (346)
T COG2706 130 VVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLG----------TDRIFLYDLDDGKLTPADPAE-----V------- 187 (346)
T ss_pred eeecCCCCCCccccCCccceeeeCCCCCEEEEeecC----------CceEEEEEcccCccccccccc-----c-------
Confidence 111 1125567789999988766543 346888888754432222111 0
Q ss_pred CccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC---------CceeEEEeecCCEEEEEEe
Q 005093 326 CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES---------NFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 326 ~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~---------~~~~~~~s~~~~~l~~~~~ 396 (715)
.+ ..+...+.|.|+++..|+...-.+....|.+|...|+.++|-.... -.+..-+++||+.|+++-.
T Consensus 188 -~~---G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNR 263 (346)
T COG2706 188 -KP---GAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNR 263 (346)
T ss_pred -CC---CCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecC
Confidence 01 1356788999999999988888888899999988888877632211 1233467888877766554
Q ss_pred CCCCCCeEEEEeeccc
Q 005093 397 SPVDVPQVKYGYFVDK 412 (715)
Q Consensus 397 ~~~~p~~l~~~~~~~~ 412 (715)
+.+ .-.+|.++..++
T Consensus 264 g~d-sI~~f~V~~~~g 278 (346)
T COG2706 264 GHD-SIAVFSVDPDGG 278 (346)
T ss_pred CCC-eEEEEEEcCCCC
Confidence 444 333444554443
No 210
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=98.53 E-value=3.8e-05 Score=71.28 Aligned_cols=229 Identities=14% Similarity=0.158 Sum_probs=128.5
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+-...|+|...-+.++...+ . ...+| ..++....+....+. ..+.|||||+++++...+
T Consensus 65 ~svdql~w~~~~~d~~atas~d-k---~ir~wd~r~~k~~~~i~~~~en----------i~i~wsp~g~~~~~~~kd--- 127 (313)
T KOG1407|consen 65 DSVDQLCWDPKHPDLFATASGD-K---TIRIWDIRSGKCTARIETKGEN----------INITWSPDGEYIAVGNKD--- 127 (313)
T ss_pred cchhhheeCCCCCcceEEecCC-c---eEEEEEeccCcEEEEeeccCcc----------eEEEEcCCCCEEEEecCc---
Confidence 4566678877776666665543 2 23344 455555555543333 489999999999996332
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
..|-.+|..+-+...- ......+....|+-++.
T Consensus 128 -----------------------------------------D~it~id~r~~~~~~~--~~~~~e~ne~~w~~~nd---- 160 (313)
T KOG1407|consen 128 -----------------------------------------DRITFIDARTYKIVNE--EQFKFEVNEISWNNSND---- 160 (313)
T ss_pred -----------------------------------------ccEEEEEecccceeeh--hcccceeeeeeecCCCC----
Confidence 4466666654443322 23334566778985555
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
+.|..+ +.+-|-.+..+ .-.....|..+....--+.|+|||+++|..+.
T Consensus 161 -~Fflt~--------------GlG~v~ILsyp----------------sLkpv~si~AH~snCicI~f~p~GryfA~GsA 209 (313)
T KOG1407|consen 161 -LFFLTN--------------GLGCVEILSYP----------------SLKPVQSIKAHPSNCICIEFDPDGRYFATGSA 209 (313)
T ss_pred -EEEEec--------------CCceEEEEecc----------------ccccccccccCCcceEEEEECCCCceEeeccc
Confidence 666653 22233344331 44566667777777788999999999987765
Q ss_pred CCCCCCCCccccceeEeeecCCCC-CCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNG-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
+- .+-++|++.-- .+.++.-. -.+..+.|+-||+.| .+.+++-- |
T Consensus 210 DA-----------lvSLWD~~ELiC~R~isRld--------------------wpVRTlSFS~dg~~l-ASaSEDh~--I 255 (313)
T KOG1407|consen 210 DA-----------LVSLWDVDELICERCISRLD--------------------WPVRTLSFSHDGRML-ASASEDHF--I 255 (313)
T ss_pred cc-----------eeeccChhHhhhheeecccc--------------------CceEEEEeccCccee-eccCccce--E
Confidence 52 13334433200 11222111 135677899999844 44443322 3
Q ss_pred EEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCC
Q 005093 360 ISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 360 ~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
=..+..||....=.+..+.-....|.|...-|++..+..+.
T Consensus 256 DIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~ 296 (313)
T KOG1407|consen 256 DIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDG 296 (313)
T ss_pred EeEecccCCeEEEeeccCCceeEEecCCCceeeEEecCCCC
Confidence 23355666654433333322224667766666666655443
No 211
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=98.52 E-value=2.6e-06 Score=80.74 Aligned_cols=246 Identities=13% Similarity=0.144 Sum_probs=141.4
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
+....|||||++|+-.+-. ....+| .+|+.++-..-... .+-..-|..+-.+.||-|..-||-.+.
T Consensus 216 ~EcA~FSPDgqyLvsgSvD-----GFiEVWny~~GKlrKDLkYQAq-d~fMMmd~aVlci~FSRDsEMlAsGsq------ 283 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSGSVD-----GFIEVWNYTTGKLRKDLKYQAQ-DNFMMMDDAVLCISFSRDSEMLASGSQ------ 283 (508)
T ss_pred hhheeeCCCCceEeecccc-----ceeeeehhccchhhhhhhhhhh-cceeecccceEEEeecccHHHhhccCc------
Confidence 5567999999999865433 477788 56666543211000 000111223357788888887766322
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc-eEeecCCCCCCccceEEEecCCCCCccE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
...|-+|.+.+|. .++.. -.....+..++||.|+..
T Consensus 284 --------------------------------------DGkIKvWri~tG~ClRrFd-rAHtkGvt~l~FSrD~Sq---- 320 (508)
T KOG0275|consen 284 --------------------------------------DGKIKVWRIETGQCLRRFD-RAHTKGVTCLSFSRDNSQ---- 320 (508)
T ss_pred --------------------------------------CCcEEEEEEecchHHHHhh-hhhccCeeEEEEccCcch----
Confidence 2568888888886 33331 233446778999999999
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEec
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+-.+. +..+...-+ .+|.. ...-.+...+....|++||..++-.+.
T Consensus 321 iLS~sf---------------D~tvRiHGl-----------------KSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSs 368 (508)
T KOG0275|consen 321 ILSASF---------------DQTVRIHGL-----------------KSGKCLKEFRGHSSYVNEATFTDDGHHIISASS 368 (508)
T ss_pred hhcccc---------------cceEEEecc-----------------ccchhHHHhcCccccccceEEcCCCCeEEEecC
Confidence 876652 122333333 44443 334445556888999999999987776
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCc--ccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSS--LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~l--t~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
+. .+.+++..+++-..- ..+.+- .+.++...|.+-.-++..+ ..+.
T Consensus 369 Dg-----------tvkvW~~KtteC~~Tfk~~~~d~-------------------~vnsv~~~PKnpeh~iVCN--rsnt 416 (508)
T KOG0275|consen 369 DG-----------TVKVWHGKTTECLSTFKPLGTDY-------------------PVNSVILLPKNPEHFIVCN--RSNT 416 (508)
T ss_pred Cc-----------cEEEecCcchhhhhhccCCCCcc-------------------cceeEEEcCCCCceEEEEc--CCCe
Confidence 63 366777666442110 000100 1122222222211112111 2357
Q ss_pred EEEEECCCCcEEEecCCCC---CceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 359 IISVNVSSGELLRITPAES---NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~~~~---~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
+|.+++.+.-++..+.+.. ++-...+|+.|.++|++.+.. .+|-+...+++
T Consensus 417 v~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~----vlYCF~~~sG~ 470 (508)
T KOG0275|consen 417 VYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDG----VLYCFSVLSGK 470 (508)
T ss_pred EEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCc----EEEEEEeecCc
Confidence 9999996555555655432 555567899999999988654 35656665554
No 212
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.51 E-value=1.5e-06 Score=88.64 Aligned_cols=248 Identities=14% Similarity=0.125 Sum_probs=131.5
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCC-----CchhhhhcCCCCCC
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLG-----FGEEALQSLPGKVG 537 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~-----~g~~~~~~~~~~~~ 537 (715)
..+.+.++.|......++.|.+++.||...... ........+++.++.++..+....++ +|............
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 108 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKE--QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFS 108 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCcccccc--CcchHHHHhhhceeEEeeeccccccccccccccccCccccccccc
Confidence 668888999986544478999999999554422 22226777889999988887511100 11000000000000
Q ss_pred -ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcchhhhhccC-------CCC
Q 005093 538 -SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLALMVGT-------TDI 606 (715)
Q Consensus 538 -~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~~~~~~~~~-------~~~ 606 (715)
..........+..-.........+....|.+.|+..+..++...+. ..+.++...+.-........ ...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~ 188 (299)
T COG1073 109 AAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELAREL 188 (299)
T ss_pred hhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhh
Confidence 0000000111111001111223677888888888877777665542 21212111111100000000 000
Q ss_pred CCceeeec-cCCC-CCCCCCCCCChhhHHHHHhcCchhhccCCC-CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEE
Q 005093 607 PDWCYVES-YGSK-GKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 683 (715)
Q Consensus 607 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 683 (715)
........ +... ............ ...+...++...+.++. +|+|++||.+|..||...+..++...+.. +.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~ 265 (299)
T COG1073 189 IDYLITPGGFAPLPAPEAPLDTLPLR-AVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER--PKKL 265 (299)
T ss_pred hhhhccCCCCCCCCcccccccccccc-hhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC--CceE
Confidence 00000000 0000 000001111112 33455666777777777 69999999999999999999999888764 6778
Q ss_pred EEeCCCCccCCCCCch--HHHHHHHHHHHHHhcC
Q 005093 684 IVFPNDVHGIERPQSD--FESFLNIGLWFKKYCK 715 (715)
Q Consensus 684 ~~~~~~~H~~~~~~~~--~~~~~~i~~wl~~~l~ 715 (715)
..+++++|........ .+.+..+.+||.+++.
T Consensus 266 ~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l~ 299 (299)
T COG1073 266 LFVPGGGHIDLYDNPPAVEQALDKLAEFLERHLL 299 (299)
T ss_pred EEecCCccccccCccHHHHHHHHHHHHHHHHhcC
Confidence 8899999987753333 3789999999998863
No 213
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.51 E-value=1.5e-05 Score=84.39 Aligned_cols=184 Identities=14% Similarity=0.182 Sum_probs=117.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEec--CC-ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
..+...++||||+.||--.++ ++ ..+|+ .| =....++.+.++ ..+.|+.+|+.|+-++-+
T Consensus 351 ~~i~~l~YSpDgq~iaTG~eD--gK---VKvWn~~SgfC~vTFteHts~V----------t~v~f~~~g~~llssSLD-- 413 (893)
T KOG0291|consen 351 DRITSLAYSPDGQLIATGAED--GK---VKVWNTQSGFCFVTFTEHTSGV----------TAVQFTARGNVLLSSSLD-- 413 (893)
T ss_pred cceeeEEECCCCcEEEeccCC--Cc---EEEEeccCceEEEEeccCCCce----------EEEEEEecCCEEEEeecC--
Confidence 457888999999999865554 33 34552 22 122233444555 799999999888765433
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc-eEeecCCCCCCccceEEEecCCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
..+..||+.-.. .+..+ .+.......++-.|.|.
T Consensus 414 ------------------------------------------GtVRAwDlkRYrNfRTft-~P~p~QfscvavD~sGe-- 448 (893)
T KOG0291|consen 414 ------------------------------------------GTVRAWDLKRYRNFRTFT-SPEPIQFSCVAVDPSGE-- 448 (893)
T ss_pred ------------------------------------------CeEEeeeecccceeeeec-CCCceeeeEEEEcCCCC--
Confidence 457788886543 34443 44444455555666687
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
|++.+..+ ..+|+++++ ++|+. ..|..+++.+...+|+|+|+.||-
T Consensus 449 ---lV~AG~~d-------------~F~IfvWS~-----------------qTGqllDiLsGHEgPVs~l~f~~~~~~LaS 495 (893)
T KOG0291|consen 449 ---LVCAGAQD-------------SFEIFVWSV-----------------QTGQLLDILSGHEGPVSGLSFSPDGSLLAS 495 (893)
T ss_pred ---EEEeeccc-------------eEEEEEEEe-----------------ecCeeeehhcCCCCcceeeEEccccCeEEe
Confidence 77776321 137999997 66654 577888999999999999998887
Q ss_pred EecCCCCCCCCccccceeEeeecCC--CCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~--~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
.|-+.+ +.++|+=. +....+ ++. ...-.+.|+|||+.|.+.+.+
T Consensus 496 ~SWDkT-----------VRiW~if~s~~~vEtl--------~i~-------------sdvl~vsfrPdG~elaVaTld 541 (893)
T KOG0291|consen 496 GSWDKT-----------VRIWDIFSSSGTVETL--------EIR-------------SDVLAVSFRPDGKELAVATLD 541 (893)
T ss_pred ccccce-----------EEEEEeeccCceeeeE--------eec-------------cceeEEEEcCCCCeEEEEEec
Confidence 665542 55555422 122111 110 023466799999999887764
No 214
>PRK04940 hypothetical protein; Provisional
Probab=98.50 E-value=1.9e-06 Score=77.69 Aligned_cols=118 Identities=11% Similarity=0.122 Sum_probs=72.3
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-ccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhc
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 638 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (715)
++++|+|.|+||+.|.+++.++. + .+|+++|.+..... .... +.. .. +. .-.....+.+..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~~i-----------g~~-~~-y~-~~~~~h~~eL~~- 121 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENMEGKI-----------DRP-EE-YA-DIATKCVTNFRE- 121 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHHHHHh-----------CCC-cc-hh-hhhHHHHHHhhh-
Confidence 46999999999999999999865 3 46677787654221 1100 000 00 00 000111112210
Q ss_pred CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 639 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 639 sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
+-.-..+++..+.|+++...++.+.+... .+..+.+|++|.|... .+.+..|++|++
T Consensus 122 -------~~p~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~GGdH~f~~f---e~~l~~I~~F~~ 178 (180)
T PRK04940 122 -------KNRDRCLVILSRNDEVLDSQRTAEELHPY------YEIVWDEEQTHKFKNI---SPHLQRIKAFKT 178 (180)
T ss_pred -------cCcccEEEEEeCCCcccCHHHHHHHhccC------ceEEEECCCCCCCCCH---HHHHHHHHHHHh
Confidence 11123689999999999877766554332 2577999999998744 356788999885
No 215
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.48 E-value=7.1e-06 Score=74.98 Aligned_cols=122 Identities=18% Similarity=0.210 Sum_probs=83.4
Q ss_pred HHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC--C------CceeEEEecCCcchhhhhccCCCCCCceeeecc
Q 005093 544 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--P------DKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 615 (715)
Q Consensus 544 ~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (715)
+....+++.+++-.| +|+|+|.|+.++..+++.. . ..|+-+|+++|+....
T Consensus 92 l~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~----------------- 150 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS----------------- 150 (230)
T ss_pred HHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc-----------------
Confidence 344456777777666 7999999999999988721 1 1367777777753210
Q ss_pred CCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 616 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
..... ..+...+++|.|.+.|+.|.++|...+..+++....+ .++.. .+||.+..
T Consensus 151 --------------~~~~~------~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~H-pggH~VP~ 205 (230)
T KOG2551|consen 151 --------------KKLDE------SAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEH-PGGHIVPN 205 (230)
T ss_pred --------------chhhh------hhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC----eEEec-CCCccCCC
Confidence 00000 1223468899999999999999999999999888653 34444 45897754
Q ss_pred CCchHHHHHHHHHHHHHhc
Q 005093 696 PQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 696 ~~~~~~~~~~i~~wl~~~l 714 (715)
.. ...+.|.+||...+
T Consensus 206 ~~---~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 206 KA---KYKEKIADFIQSFL 221 (230)
T ss_pred ch---HHHHHHHHHHHHHH
Confidence 43 56778888887653
No 216
>PTZ00420 coronin; Provisional
Probab=98.46 E-value=5.9e-05 Score=81.94 Aligned_cols=165 Identities=8% Similarity=0.043 Sum_probs=96.0
Q ss_pred ccccceEEeeCCC-CceEEEEecCCCCCCeEEEEecCCcc-EE----EEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 41 EMTGASAVVPSPS-GSKLLVVRNPENESPIQFELWSQSQL-EK----EFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 41 ~~~~~~~~~~Spd-g~~la~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
+.+.+...+|||+ +..||-.... +.-.+|.+..++.. .. +..+. +..+ .+..+.|+|++..++..
T Consensus 73 H~~~V~~lafsP~~~~lLASgS~D--gtIrIWDi~t~~~~~~~i~~p~~~L~-gH~~------~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 73 HTSSILDLQFNPCFSEILASGSED--LTIRVWEIPHNDESVKEIKDPQCILK-GHKK------KISIIDWNPMNYYIMCS 143 (568)
T ss_pred CCCCEEEEEEcCCCCCEEEEEeCC--CeEEEEECCCCCccccccccceEEee-cCCC------cEEEEEECCCCCeEEEE
Confidence 4467899999997 6666655433 33334443323321 11 11111 1111 23799999999887655
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecC
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spd 194 (715)
+.. ...|.+||+.+++.... ......+..++|+||
T Consensus 144 gS~-------------------------------------------DgtIrIWDl~tg~~~~~--i~~~~~V~Slswspd 178 (568)
T PTZ00420 144 SGF-------------------------------------------DSFVNIWDIENEKRAFQ--INMPKKLSSLKWNIK 178 (568)
T ss_pred EeC-------------------------------------------CCeEEEEECCCCcEEEE--EecCCcEEEEEECCC
Confidence 332 25699999988875432 122345778999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccc-----cceeE
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSA-----FFPRF 268 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~-----~~~~~ 268 (715)
|+. |+..+ ....|.++|+ .+++. ..+..+.+.. ....|
T Consensus 179 G~l----Lat~s---------------~D~~IrIwD~-----------------Rsg~~i~tl~gH~g~~~s~~v~~~~f 222 (568)
T PTZ00420 179 GNL----LSGTC---------------VGKHMHIIDP-----------------RKQEIASSFHIHDGGKNTKNIWIDGL 222 (568)
T ss_pred CCE----EEEEe---------------cCCEEEEEEC-----------------CCCcEEEEEecccCCceeEEEEeeeE
Confidence 997 66543 2235777886 44433 3344333321 11235
Q ss_pred cCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 269 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 269 spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
++|+++|+-++... ....+|.++|+..
T Consensus 223 s~d~~~IlTtG~d~-------~~~R~VkLWDlr~ 249 (568)
T PTZ00420 223 GGDDNYILSTGFSK-------NNMREMKLWDLKN 249 (568)
T ss_pred cCCCCEEEEEEcCC-------CCccEEEEEECCC
Confidence 69999887766553 1223688899875
No 217
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.45 E-value=2.7e-06 Score=83.52 Aligned_cols=155 Identities=19% Similarity=0.120 Sum_probs=93.5
Q ss_pred CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCC--
Q 005093 183 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI-- 260 (715)
Q Consensus 183 ~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-- 260 (715)
..++....||||.+. ++-.+.. ..+++.|+ .+|..+.+.+..
T Consensus 269 ~~~V~yi~wSPDdry----LlaCg~~---------------e~~~lwDv-----------------~tgd~~~~y~~~~~ 312 (519)
T KOG0293|consen 269 SQPVSYIMWSPDDRY----LLACGFD---------------EVLSLWDV-----------------DTGDLRHLYPSGLG 312 (519)
T ss_pred cCceEEEEECCCCCe----EEecCch---------------HheeeccC-----------------CcchhhhhcccCcC
Confidence 346778999999998 8876521 13777776 677777665544
Q ss_pred ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcc
Q 005093 261 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 261 ~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 340 (715)
.+..+.+|-|||..++-.+.+ .+++.+|+++.... .+..+ .-| -+..++.
T Consensus 313 ~S~~sc~W~pDg~~~V~Gs~d-----------r~i~~wdlDgn~~~----~W~gv----------r~~-----~v~dlai 362 (519)
T KOG0293|consen 313 FSVSSCAWCPDGFRFVTGSPD-----------RTIIMWDLDGNILG----NWEGV----------RDP-----KVHDLAI 362 (519)
T ss_pred CCcceeEEccCCceeEecCCC-----------CcEEEecCCcchhh----ccccc----------ccc-----eeEEEEE
Confidence 467889999999997655544 35888888874421 11000 001 1345567
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 341 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 341 ~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
++||++++.... ..++..++..+...+.+......+....+|.++..++. . -.+.++.+-|+.
T Consensus 363 t~Dgk~vl~v~~---d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~Lv-n---L~~qei~LWDl~ 425 (519)
T KOG0293|consen 363 TYDGKYVLLVTV---DKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALV-N---LQDQEIHLWDLE 425 (519)
T ss_pred cCCCcEEEEEec---ccceeeechhhhhhhccccccCceeEEEEcCCCcEEEE-E---cccCeeEEeecc
Confidence 889998887664 24566667766665544444433333445555544333 2 244456555543
No 218
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=98.45 E-value=1.1e-05 Score=80.64 Aligned_cols=261 Identities=10% Similarity=0.074 Sum_probs=142.5
Q ss_pred ccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCc
Q 005093 10 LANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQ 87 (715)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (715)
..-.....+.++-+++...+ .|++--|-. -.+....|+|+|+..+|++.+. .++..| ..++..++-.. .
T Consensus 229 lvaG~d~~lrifqvDGk~N~--~lqS~~l~~--fPi~~a~f~p~G~~~i~~s~rr----ky~ysyDle~ak~~k~~~~-~ 299 (514)
T KOG2055|consen 229 LVAGLDGTLRIFQVDGKVNP--KLQSIHLEK--FPIQKAEFAPNGHSVIFTSGRR----KYLYSYDLETAKVTKLKPP-Y 299 (514)
T ss_pred EEecCCCcEEEEEecCccCh--hheeeeecc--CccceeeecCCCceEEEecccc----eEEEEeeccccccccccCC-C
Confidence 33334444445446665542 344333222 2357779999999677765543 233334 44455544432 2
Q ss_pred cccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEE
Q 005093 88 TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVI 167 (715)
Q Consensus 88 ~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (715)
+.... .+..|..|||++.|++.. ....|+++
T Consensus 300 g~e~~-----~~e~FeVShd~~fia~~G--------------------------------------------~~G~I~lL 330 (514)
T KOG2055|consen 300 GVEEK-----SMERFEVSHDSNFIAIAG--------------------------------------------NNGHIHLL 330 (514)
T ss_pred Ccccc-----hhheeEecCCCCeEEEcc--------------------------------------------cCceEEee
Confidence 22111 236899999999888852 23678888
Q ss_pred EccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccC
Q 005093 168 NINSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESS 247 (715)
Q Consensus 168 ~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 247 (715)
-..|++..-- ..-+..+.++.||.||+. |+.++ ..++||++|+
T Consensus 331 hakT~eli~s--~KieG~v~~~~fsSdsk~----l~~~~---------------~~GeV~v~nl---------------- 373 (514)
T KOG2055|consen 331 HAKTKELITS--FKIEGVVSDFTFSSDSKE----LLASG---------------GTGEVYVWNL---------------- 373 (514)
T ss_pred hhhhhhhhhe--eeeccEEeeEEEecCCcE----EEEEc---------------CCceEEEEec----------------
Confidence 8888764321 222345778999999987 66654 3358999998
Q ss_pred CCCCCceecCCCCc--cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeee--cCCCCCCCcccceeeeeeceecCC
Q 005093 248 SEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID--WPTNGNFSSLEKIVDVIPVVQCAE 323 (715)
Q Consensus 248 ~~~~~~~~lt~~~~--~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~--~~~~~~~~lt~~~~~~~~~~~~~~ 323 (715)
....+......++ .-.+.+.|++|++||..+... --.||-.+ +.++..+.+.. +.++
T Consensus 374 -~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~G---------iVNIYd~~s~~~s~~PkPik~----~dNL----- 434 (514)
T KOG2055|consen 374 -RQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSG---------IVNIYDGNSCFASTNPKPIKT----VDNL----- 434 (514)
T ss_pred -CCcceEEEEeecCccceeeeeecCCCceEEeccCcc---------eEEEeccchhhccCCCCchhh----hhhh-----
Confidence 4333333222333 456778899999887666542 22344322 12222222210 0000
Q ss_pred CCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCCC---CceeEEEeecCCEEEE
Q 005093 324 GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAES---NFSWSLLTLDGDNIIA 393 (715)
Q Consensus 324 ~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~---~~~~~~~s~~~~~l~~ 393 (715)
...+..+.|++|+..+ ...+......|-.+.+.+-.+-. ...... -+.-..|||.++.+.+
T Consensus 435 --------tt~Itsl~Fn~d~qiL-AiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAv 499 (514)
T KOG2055|consen 435 --------TTAITSLQFNHDAQIL-AIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAV 499 (514)
T ss_pred --------heeeeeeeeCcchhhh-hhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEe
Confidence 0145678899998744 44444444555556654443322 222222 1222468887766543
No 219
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.45 E-value=1.4e-06 Score=96.76 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=66.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhh-c--C-----CC--------------CCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-S--L-----PG--------------KVG 537 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~-~--~-----~~--------------~~~ 537 (715)
..|+||++||.... ...|...+..|+++||.|+++|+|| ||.+... . . .. +-.
T Consensus 448 g~P~VVllHG~~g~--~~~~~~lA~~La~~Gy~VIaiDlpG---HG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 448 GWPVVIYQHGITGA--KENALAFAGTLAAAGVATIAIDHPL---HGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CCcEEEEeCCCCCC--HHHHHHHHHHHHhCCcEEEEeCCCC---CCccccccccccccccccCccceeccccccccccCH
Confidence 46899999995443 4567788899999999999999999 5554111 0 0 00 011
Q ss_pred ccchhhHHHHHHHHH------Hc----CCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 538 SQDVNDVLTAIDHVI------DM----GLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~------~~----~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
.+.+.|+......+. .. ...+..++.++||||||.++..++..
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 222456666666555 11 12456899999999999999998875
No 220
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=98.44 E-value=6.7e-05 Score=72.93 Aligned_cols=300 Identities=13% Similarity=0.060 Sum_probs=150.1
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (715)
.+.+||. +.++. .+.++|... ..+....||.||.+||----. +.-.+|.+..++....+.+.-..+
T Consensus 86 D~AflW~--~~~ge-~~~eltgHK-----DSVt~~~FshdgtlLATGdms--G~v~v~~~stg~~~~~~~~e~~di---- 151 (399)
T KOG0296|consen 86 DLAFLWD--ISTGE-FAGELTGHK-----DSVTCCSFSHDGTLLATGDMS--GKVLVFKVSTGGEQWKLDQEVEDI---- 151 (399)
T ss_pred ceEEEEE--ccCCc-ceeEecCCC-----CceEEEEEccCceEEEecCCC--ccEEEEEcccCceEEEeecccCce----
Confidence 5667777 44443 566666555 789999999999988843221 333333333443333333222233
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCC
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSG 172 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g 172 (715)
.-+.|.|-+..|++.+++. ...+|.++....-+........-.-..|.|+ |+++ ..-....|.+|++++|
T Consensus 152 ------eWl~WHp~a~illAG~~DG--svWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd-GKr~~tgy~dgti~~Wn~ktg 222 (399)
T KOG0296|consen 152 ------EWLKWHPRAHILLAGSTDG--SVWMWQIPSQALCKVMSGHNSPCTCGEFIPD-GKRILTGYDDGTIIVWNPKTG 222 (399)
T ss_pred ------EEEEecccccEEEeecCCC--cEEEEECCCcceeeEecCCCCCcccccccCC-CceEEEEecCceEEEEecCCC
Confidence 6789999887776655443 3344444332211222223333344557777 4444 3333578999999999
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
.+.-..+...........++.+|. .++..+..... -.+.+....+..+. ++..
T Consensus 223 ~p~~~~~~~e~~~~~~~~~~~~~~-----~~~~g~~e~~~----~~~~~~sgKVv~~~------------------n~~~ 275 (399)
T KOG0296|consen 223 QPLHKITQAEGLELPCISLNLAGS-----TLTKGNSEGVA----CGVNNGSGKVVNCN------------------NGTV 275 (399)
T ss_pred ceeEEecccccCcCCccccccccc-----eeEeccCCccE----EEEccccceEEEec------------------CCCC
Confidence 765432122233344455666665 45555433210 01111112222222 1111
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
.......+....++.++|-...|=...- | .-...|.++|++....|.+......
T Consensus 276 ~~l~~~~e~~~esve~~~~ss~lpL~A~------G--~vdG~i~iyD~a~~~~R~~c~he~~------------------ 329 (399)
T KOG0296|consen 276 PELKPSQEELDESVESIPSSSKLPLAAC------G--SVDGTIAIYDLAASTLRHICEHEDG------------------ 329 (399)
T ss_pred ccccccchhhhhhhhhcccccccchhhc------c--cccceEEEEecccchhheeccCCCc------------------
Confidence 1111112222333333333322211110 1 1123588889888776665544433
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEE
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~ 395 (715)
+..+-|.+ .. .+++...++ .++.+|..||+..-... ....+....++++++.++.++
T Consensus 330 --V~~l~w~~-t~-~l~t~c~~g--~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s 387 (399)
T KOG0296|consen 330 --VTKLKWLN-TD-YLLTACANG--KVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVS 387 (399)
T ss_pred --eEEEEEcC-cc-hheeeccCc--eEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEec
Confidence 33445876 33 444444444 67777988998776543 333333345666666555443
No 221
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=98.43 E-value=3.5e-05 Score=72.91 Aligned_cols=275 Identities=13% Similarity=0.119 Sum_probs=155.7
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
++...+.+....|+|||..+|-. +..+...+| ..|.-+....+ .+..+ .+..+.|++||..|+-.+.
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSg-----G~Dr~I~LWnv~gdceN~~~l-kgHsg------AVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASG-----GSDRAIVLWNVYGDCENFWVL-KGHSG------AVMELHGMRDGSHILSCGT 110 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeec-----CCcceEEEEeccccccceeee-ccccc------eeEeeeeccCCCEEEEecC
Confidence 34445778999999999988743 444555677 34433322222 12212 2389999999999988766
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccC--CccCceEEEEEccCCceEeecCCCCCCccceEEEecC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYA--GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spd 194 (715)
+.+.. .|.....+...+.+......+.+. ..+-|-.+. .....++.+||..+.+..+. ....+....+.|..+
T Consensus 111 Dk~v~--~wD~~tG~~~rk~k~h~~~vNs~~-p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t--~~~kyqltAv~f~d~ 185 (338)
T KOG0265|consen 111 DKTVR--GWDAETGKRIRKHKGHTSFVNSLD-PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKT--FENKYQLTAVGFKDT 185 (338)
T ss_pred CceEE--EEecccceeeehhccccceeeecC-ccccCCeEEEecCCCceEEEEeecccchhhc--cccceeEEEEEeccc
Confidence 55432 344444444433333222222211 111122221 12347899999987766555 455677889999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCe
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 274 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~ 274 (715)
+.. +.... -+++|-+.|+ +...-...+..+...+.....||+|..
T Consensus 186 s~q----v~sgg---------------Idn~ikvWd~----------------r~~d~~~~lsGh~DtIt~lsls~~gs~ 230 (338)
T KOG0265|consen 186 SDQ----VISGG---------------IDNDIKVWDL----------------RKNDGLYTLSGHADTITGLSLSRYGSF 230 (338)
T ss_pred ccc----eeecc---------------ccCceeeecc----------------ccCcceEEeecccCceeeEEeccCCCc
Confidence 987 55433 2234555565 233444566777778899999999998
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCC--CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGN--FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~--~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+.-.+.+. .|.++|...--. +.+. +..... - ..+...-..+|+|+++.+-+.+.
T Consensus 231 llsnsMd~-----------tvrvwd~rp~~p~~R~v~--------if~g~~-h----nfeknlL~cswsp~~~~i~ags~ 286 (338)
T KOG0265|consen 231 LLSNSMDN-----------TVRVWDVRPFAPSQRCVK--------IFQGHI-H----NFEKNLLKCSWSPNGTKITAGSA 286 (338)
T ss_pred cccccccc-----------eEEEEEecccCCCCceEE--------Eeecch-h----hhhhhcceeeccCCCCccccccc
Confidence 86555543 356666543111 1111 000000 0 01223446789999997765444
Q ss_pred eCCeeEEEEEECCCCc-EEEecCCCCCceeEEEeecCCEE
Q 005093 353 WGSSQVIISVNVSSGE-LLRITPAESNFSWSLLTLDGDNI 391 (715)
Q Consensus 353 ~~~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~~~~~l 391 (715)
...+|.+|..+.. +..+....+.+....|.|...-|
T Consensus 287 ---dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~ii 323 (338)
T KOG0265|consen 287 ---DRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPII 323 (338)
T ss_pred ---cceEEEeecccccEEEEcCCcceeEEEeeecCCCcEE
Confidence 3578999986633 44455455544455666654433
No 222
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.42 E-value=1.2e-05 Score=79.68 Aligned_cols=110 Identities=19% Similarity=0.282 Sum_probs=72.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHH---hCCcEEEEEcCCCCCCCchhhhhc-CCCCCCccchhh----HHHHHHHHH
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLS---SVGYSLLIVNYRGSLGFGEEALQS-LPGKVGSQDVND----VLTAIDHVI 552 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la---~~G~~vi~~d~rG~~~~g~~~~~~-~~~~~~~~~~~d----~~~~i~~l~ 552 (715)
.++|+++.|.|+. ...|...+..|. ...+.|+++.+.|. ....... ...+......+| ..+.++.+.
T Consensus 2 ~~li~~IPGNPGl--v~fY~~Fl~~L~~~l~~~~~i~~ish~Gh---~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGL--VEFYEEFLSALYEKLNPQFEILGISHAGH---STSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCCh--HHHHHHHHHHHHHhCCCCCeeEEecCCCC---cCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 4789999998876 446666666665 35899999999983 3222110 001112223333 334444444
Q ss_pred HcCCCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcc
Q 005093 553 DMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLC 595 (715)
Q Consensus 553 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~ 595 (715)
........++.++|||.|+++++.++.+.+ ..++.++++.|..
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 432114678999999999999999999988 6788888888864
No 223
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.41 E-value=7.1e-06 Score=90.43 Aligned_cols=107 Identities=19% Similarity=0.152 Sum_probs=65.3
Q ss_pred CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC-CCceecCCCCcc
Q 005093 184 LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISS 262 (715)
Q Consensus 184 ~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~ 262 (715)
..+.++.||||+.. ++-.+ .++.|.+++. .+ ...+.+-.+...
T Consensus 130 ~DV~Dv~Wsp~~~~----lvS~s---------------~DnsViiwn~-----------------~tF~~~~vl~~H~s~ 173 (942)
T KOG0973|consen 130 SDVLDVNWSPDDSL----LVSVS---------------LDNSVIIWNA-----------------KTFELLKVLRGHQSL 173 (942)
T ss_pred CccceeccCCCccE----EEEec---------------ccceEEEEcc-----------------ccceeeeeeeccccc
Confidence 35678899999986 66654 2235777775 33 344455566667
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC-CCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
+-..+|.|-|+++|-.+.+.+ |.++++.. +-.+.++..+... ++ ..-...+.||
T Consensus 174 VKGvs~DP~Gky~ASqsdDrt-----------ikvwrt~dw~i~k~It~pf~~~------------~~--~T~f~RlSWS 228 (942)
T KOG0973|consen 174 VKGVSWDPIGKYFASQSDDRT-----------LKVWRTSDWGIEKSITKPFEES------------PL--TTFFLRLSWS 228 (942)
T ss_pred ccceEECCccCeeeeecCCce-----------EEEEEcccceeeEeeccchhhC------------CC--cceeeecccC
Confidence 899999999999987776642 55555332 2223343322110 00 0013578899
Q ss_pred cCCCEEEEEe
Q 005093 342 SDGCTMLLSS 351 (715)
Q Consensus 342 ~dg~~l~~~~ 351 (715)
|||++|....
T Consensus 229 PDG~~las~n 238 (942)
T KOG0973|consen 229 PDGHHLASPN 238 (942)
T ss_pred CCcCeecchh
Confidence 9999665433
No 224
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.41 E-value=0.00016 Score=71.35 Aligned_cols=237 Identities=15% Similarity=0.171 Sum_probs=133.8
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeec-CCCCeEEEEeecCCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN-SDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wS-pDg~~la~~~~~~~~~~~~ 124 (715)
-.|.|.+....|.|+.-. ...++.+...+....+...+. . .++.+. +|| .|++. ..
T Consensus 3 Egp~~d~~~g~l~~~D~~---~~~i~~~~~~~~~~~~~~~~~-~----------~G~~~~~~~g-~l~v~-~~------- 59 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIP---GGRIYRVDPDTGEVEVIDLPG-P----------NGMAFDRPDG-RLYVA-DS------- 59 (246)
T ss_dssp EEEEEETTTTEEEEEETT---TTEEEEEETTTTEEEEEESSS-E----------EEEEEECTTS-EEEEE-ET-------
T ss_pred cceEEECCCCEEEEEEcC---CCEEEEEECCCCeEEEEecCC-C----------ceEEEEccCC-EEEEE-Ec-------
Confidence 357999977788887543 347888874444445555444 3 477777 664 45443 21
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCC---C-CCCccceEEEecCCCCCcc
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI---P-KSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~---~-~~~~~~~~~~spdg~~~~~ 200 (715)
..+.++|+++++.+.+... . ......+.++.|||+
T Consensus 60 -------------------------------------~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~---- 98 (246)
T PF08450_consen 60 -------------------------------------GGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGN---- 98 (246)
T ss_dssp -------------------------------------TCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-----
T ss_pred -------------------------------------CceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCC----
Confidence 3345669888887766311 1 234566889999998
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+++........ ......||+++. . ++.+.+..........+|||||+.|++...
T Consensus 99 -ly~t~~~~~~~~------~~~~g~v~~~~~-----------------~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds 153 (246)
T PF08450_consen 99 -LYVTDSGGGGAS------GIDPGSVYRIDP-----------------D-GKVTVVADGLGFPNGIAFSPDGKTLYVADS 153 (246)
T ss_dssp -EEEEEECCBCTT------CGGSEEEEEEET-----------------T-SEEEEEEEEESSEEEEEEETTSSEEEEEET
T ss_pred -EEEEecCCCccc------cccccceEEECC-----------------C-CeEEEEecCcccccceEECCcchheeeccc
Confidence 666643221100 000147999995 4 666666555555778999999998877665
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
.. ..|++++++..... ++. . . .+........ .+..++...+|+ |++... +...|+
T Consensus 154 ~~----------~~i~~~~~~~~~~~-~~~-~-~--~~~~~~~~~g-------~pDG~~vD~~G~-l~va~~--~~~~I~ 208 (246)
T PF08450_consen 154 FN----------GRIWRFDLDADGGE-LSN-R-R--VFIDFPGGPG-------YPDGLAVDSDGN-LWVADW--GGGRIV 208 (246)
T ss_dssp TT----------TEEEEEEEETTTCC-EEE-E-E--EEEE-SSSSC-------EEEEEEEBTTS--EEEEEE--TTTEEE
T ss_pred cc----------ceeEEEeccccccc-eee-e-e--eEEEcCCCCc-------CCCcceEcCCCC-EEEEEc--CCCEEE
Confidence 43 35999998653321 110 0 0 0111111000 123566777886 555433 345899
Q ss_pred EEECCCCcEEEecCCCCCceeEEEe-ecCCEEEEEEe
Q 005093 361 SVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSS 396 (715)
Q Consensus 361 ~~d~~tg~~~~l~~~~~~~~~~~~s-~~~~~l~~~~~ 396 (715)
++|+++.....+..+........|. ++.+.|+++.+
T Consensus 209 ~~~p~G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 209 VFDPDGKLLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp EEETTSCEEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred EECCCccEEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 9999744444454442334445553 45677877654
No 225
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=98.40 E-value=5.6e-06 Score=83.08 Aligned_cols=153 Identities=16% Similarity=0.169 Sum_probs=101.0
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEE-ecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
+..+..++++..|.|---.|.....-+ ..-.+|.++..+...+.. .....+ ..++||++|+.++-.+-
T Consensus 210 ~~gH~kgvsai~~fp~~~hLlLS~gmD-~~vklW~vy~~~~~lrtf~gH~k~V----------rd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 210 LSGHTKGVSAIQWFPKKGHLLLSGGMD-GLVKLWNVYDDRRCLRTFKGHRKPV----------RDASFNNCGTSFLSASF 278 (503)
T ss_pred ccCCccccchhhhccceeeEEEecCCC-ceEEEEEEecCcceehhhhcchhhh----------hhhhccccCCeeeeeec
Confidence 444557789999999444554332222 555677777544433322 223333 79999999999877643
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
+ ..|.+||.+||+...- ...+....-+.|.||+.
T Consensus 279 D--------------------------------------------~~lKlwDtETG~~~~~--f~~~~~~~cvkf~pd~~ 312 (503)
T KOG0282|consen 279 D--------------------------------------------RFLKLWDTETGQVLSR--FHLDKVPTCVKFHPDNQ 312 (503)
T ss_pred c--------------------------------------------eeeeeeccccceEEEE--EecCCCceeeecCCCCC
Confidence 2 5689999999987655 34445667789999997
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec-CCCCccccceeEcCCCCeE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-t~~~~~~~~~~~spdg~~l 275 (715)
. +++++..+ ..|..+|+ .++++.+- -.+-+.+....|-++|++.
T Consensus 313 n----~fl~G~sd--------------~ki~~wDi-----------------Rs~kvvqeYd~hLg~i~~i~F~~~g~rF 357 (503)
T KOG0282|consen 313 N----IFLVGGSD--------------KKIRQWDI-----------------RSGKVVQEYDRHLGAILDITFVDEGRRF 357 (503)
T ss_pred c----EEEEecCC--------------CcEEEEec-----------------cchHHHHHHHhhhhheeeeEEccCCceE
Confidence 7 77776322 36888886 55554332 2334467888899999988
Q ss_pred EEEecCC
Q 005093 276 VFLSAKS 282 (715)
Q Consensus 276 ~~~~~~~ 282 (715)
+-++.+.
T Consensus 358 issSDdk 364 (503)
T KOG0282|consen 358 ISSSDDK 364 (503)
T ss_pred eeeccCc
Confidence 7776654
No 226
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.37 E-value=7.7e-07 Score=85.53 Aligned_cols=180 Identities=14% Similarity=0.156 Sum_probs=109.6
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
++.||.+|...++.-...+.+...-+||++-|..+.- . -..+.--++.||.|+..+++| |+.+.. ..+.
T Consensus 220 ks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFY---E-vG~m~tP~~lgYsvLGwNhPG---FagSTG----~P~p 288 (517)
T KOG1553|consen 220 KSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFY---E-VGVMNTPAQLGYSVLGWNHPG---FAGSTG----LPYP 288 (517)
T ss_pred eecCCcchhheeecCCCCCCCCCceEEEEecCCccce---E-eeeecChHHhCceeeccCCCC---ccccCC----CCCc
Confidence 4456777776666533222334456788888833221 0 012233458899999999999 544421 1122
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 617 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (715)
..+...+.+++.+.++.-....+.|.++|+|-||+-++++|..+|+ ++++|+-+.+-|+..+........|.
T Consensus 289 ~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllpLAl~rMP~~~~------- 360 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLPLALFRMPTFFS------- 360 (517)
T ss_pred ccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhhHHhhhchHHHH-------
Confidence 3345566677888888766778999999999999999999999997 89999888776654332111000000
Q ss_pred CCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCc
Q 005093 618 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPV 664 (715)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~ 664 (715)
.............+....+.+.+.|+++|--.+|+++..
T Consensus 361 --------giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 361 --------GIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred --------HHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 000011122222233344566778888888888877643
No 227
>PTZ00420 coronin; Provisional
Probab=98.37 E-value=0.00013 Score=79.19 Aligned_cols=156 Identities=13% Similarity=0.063 Sum_probs=92.7
Q ss_pred eCCCCceEEEEecCC-CCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCC-CCeEEEEeecCCCCCCCccC
Q 005093 50 PSPSGSKLLVVRNPE-NESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIAYVAEEPSPSKPTFSL 127 (715)
Q Consensus 50 ~Spdg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD-g~~la~~~~~~~~~~~~~~~ 127 (715)
.+.+++++|+..... ++...+..+|..++...+..+. +..+. +..+.|+|+ +..|+-.+.
T Consensus 34 ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~-gH~~~------V~~lafsP~~~~lLASgS~----------- 95 (568)
T PTZ00420 34 IACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLK-GHTSS------ILDLQFNPCFSEILASGSE----------- 95 (568)
T ss_pred EeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEc-CCCCC------EEEEEEcCCCCCEEEEEeC-----------
Confidence 455677888876543 2444566777444433333332 11122 279999998 565555432
Q ss_pred CCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce---------EeecCCCCCCccceEEEecCCCCC
Q 005093 128 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---------QAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~---------~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
...|.+||+.++.. ..+ ......+..++|+|++..
T Consensus 96 ---------------------------------DgtIrIWDi~t~~~~~~~i~~p~~~L--~gH~~~V~sVaf~P~g~~- 139 (568)
T PTZ00420 96 ---------------------------------DLTIRVWEIPHNDESVKEIKDPQCIL--KGHKKKISIIDWNPMNYY- 139 (568)
T ss_pred ---------------------------------CCeEEEEECCCCCccccccccceEEe--ecCCCcEEEEEECCCCCe-
Confidence 25688888865421 122 122335778999999987
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
++.++.. +..|.++|+ .+++. ..+. ....+....|+|||+.|+.
T Consensus 140 ---iLaSgS~--------------DgtIrIWDl-----------------~tg~~~~~i~-~~~~V~SlswspdG~lLat 184 (568)
T PTZ00420 140 ---IMCSSGF--------------DSFVNIWDI-----------------ENEKRAFQIN-MPKKLSSLKWNIKGNLLSG 184 (568)
T ss_pred ---EEEEEeC--------------CCeEEEEEC-----------------CCCcEEEEEe-cCCcEEEEEECCCCCEEEE
Confidence 7665522 235777786 44432 2332 3345788999999998876
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCC
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
.+.+ ..|.++|+.++..
T Consensus 185 ~s~D-----------~~IrIwD~Rsg~~ 201 (568)
T PTZ00420 185 TCVG-----------KHMHIIDPRKQEI 201 (568)
T ss_pred EecC-----------CEEEEEECCCCcE
Confidence 5533 2488889877543
No 228
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.36 E-value=0.00026 Score=70.24 Aligned_cols=267 Identities=13% Similarity=0.121 Sum_probs=138.8
Q ss_pred ccceEEeeCCCCceEEEEec---CC--CCCCeEEEEecCCc--cEEEEecCccccccccCCCcccceeecCCCCeEEEEe
Q 005093 43 TGASAVVPSPSGSKLLVVRN---PE--NESPIQFELWSQSQ--LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~---~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
+-......||||+.++.... +. +...++..+|+... ....+.++...+-.+. .....+..|+|||++++.-
T Consensus 36 g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~--~~~~~~~ls~dgk~~~V~N 113 (342)
T PF06433_consen 36 GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV--PYKNMFALSADGKFLYVQN 113 (342)
T ss_dssp ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS----GGGEEE-TTSSEEEEEE
T ss_pred ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec--ccccceEEccCCcEEEEEc
Confidence 44566788999999876432 11 24556788884443 3444455543211110 1225789999999998863
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
-. ....|-|+|++.++......+++-. .-+ |-|
T Consensus 114 ~T------------------------------------------Pa~SVtVVDl~~~kvv~ei~~PGC~--~iy---P~~ 146 (342)
T PF06433_consen 114 FT------------------------------------------PATSVTVVDLAAKKVVGEIDTPGCW--LIY---PSG 146 (342)
T ss_dssp ES------------------------------------------SSEEEEEEETTTTEEEEEEEGTSEE--EEE---EEE
T ss_pred cC------------------------------------------CCCeEEEEECCCCceeeeecCCCEE--EEE---ecC
Confidence 32 2377999999999876542123211 111 222
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCC-----CCccccceeEc
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTE-----SISSAFFPRFS 269 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~-----~~~~~~~~~~s 269 (715)
+. .+... | +++.+..+.|+ +.|+.. +.+. .+.-...|.++
T Consensus 147 ~~---~F~~l-------------C--~DGsl~~v~Ld----------------~~Gk~~~~~t~~F~~~~dp~f~~~~~~ 192 (342)
T PF06433_consen 147 NR---GFSML-------------C--GDGSLLTVTLD----------------ADGKEAQKSTKVFDPDDDPLFEHPAYS 192 (342)
T ss_dssp TT---EEEEE-------------E--TTSCEEEEEET----------------STSSEEEEEEEESSTTTS-B-S--EEE
T ss_pred CC---ceEEE-------------e--cCCceEEEEEC----------------CCCCEeEeeccccCCCCcccccccceE
Confidence 22 02222 2 22356666653 233332 2211 11124567778
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccC-CCCCCccccCCCEEE
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS-SILSNPWLSDGCTML 348 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~dg~~l~ 348 (715)
.++.+++|.+... .||.+|+++...+.. ....+... .+....|.- +...+++.+..+.||
T Consensus 193 ~~~~~~~F~Sy~G-----------~v~~~dlsg~~~~~~-----~~~~~~t~---~e~~~~WrPGG~Q~~A~~~~~~rly 253 (342)
T PF06433_consen 193 RDGGRLYFVSYEG-----------NVYSADLSGDSAKFG-----KPWSLLTD---AEKADGWRPGGWQLIAYHAASGRLY 253 (342)
T ss_dssp TTTTEEEEEBTTS-----------EEEEEEETTSSEEEE-----EEEESS-H---HHHHTTEEE-SSS-EEEETTTTEEE
T ss_pred CCCCeEEEEecCC-----------EEEEEeccCCccccc-----CcccccCc---cccccCcCCcceeeeeeccccCeEE
Confidence 8888899998763 499999988664221 11111111 111112432 334566777666677
Q ss_pred EEeeeC-------CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 349 LSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 349 ~~~~~~-------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
+.-..+ +...+|.+|+++++...-.+.........++.+..-+++..+. .-..|+++|..+++
T Consensus 254 vLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~--~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 254 VLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSA--GDGTLDVYDAATGK 323 (342)
T ss_dssp EEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEET--TTTEEEEEETTT--
T ss_pred EEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcC--CCCeEEEEeCcCCc
Confidence 655422 3568999999998865443322222235667777655554433 22458888876654
No 229
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.32 E-value=1.1e-06 Score=68.40 Aligned_cols=58 Identities=19% Similarity=0.305 Sum_probs=46.5
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhh
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEA 528 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~ 528 (715)
|.+|....+.|++ . +..+|+++||.... ...|...++.|+++||.|+++|+|| +|.+.
T Consensus 1 G~~L~~~~w~p~~---~-~k~~v~i~HG~~eh--~~ry~~~a~~L~~~G~~V~~~D~rG---hG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN---P-PKAVVVIVHGFGEH--SGRYAHLAEFLAEQGYAVFAYDHRG---HGRSE 58 (79)
T ss_pred CcEEEEEEecCCC---C-CCEEEEEeCCcHHH--HHHHHHHHHHHHhCCCEEEEECCCc---CCCCC
Confidence 5678888888863 2 78899999995433 3468889999999999999999999 66553
No 230
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.31 E-value=0.00025 Score=72.77 Aligned_cols=278 Identities=13% Similarity=0.089 Sum_probs=148.0
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (715)
....|.++|+.++-... .+.. +...+..=.-..||.|++++|=+..+. + .+..+-. -.+.+......
T Consensus 280 e~~~l~IWDI~tG~lkr-sF~~--~~~~~~~WP~frWS~DdKy~Arm~~~s-----i-sIyEtps-f~lld~Kslki--- 346 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKR-SFPV--IKSPYLKWPIFRWSHDDKYFARMTGNS-----I-SIYETPS-FMLLDKKSLKI--- 346 (698)
T ss_pred CCceEEEEEccccchhc-ceec--cCCCccccceEEeccCCceeEEeccce-----E-EEEecCc-eeeecccccCC---
Confidence 34456666687765321 1111 001111234468999999999775432 2 2222111 22222211111
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
..+..++|||.+.-|||.+...... -..+-++.+-++.
T Consensus 347 ---~gIr~FswsP~~~llAYwtpe~~~~---------------------------------------parvtL~evPs~~ 384 (698)
T KOG2314|consen 347 ---SGIRDFSWSPTSNLLAYWTPETNNI---------------------------------------PARVTLMEVPSKR 384 (698)
T ss_pred ---ccccCcccCCCcceEEEEcccccCC---------------------------------------cceEEEEecCccc
Confidence 1227999999999999987543211 0223333332222
Q ss_pred eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccce-eeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 174 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRK-LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~-~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
..+.. --.+.....+.|-.+|+. |.|-..+....+ .|.. .+-+|++++ +..-
T Consensus 385 ~iRt~-nlfnVsDckLhWQk~gdy----LcvkvdR~tK~~~~g~f----~n~eIfrir------------------eKdI 437 (698)
T KOG2314|consen 385 EIRTK-NLFNVSDCKLHWQKSGDY----LCVKVDRHTKSKVKGQF----SNLEIFRIR------------------EKDI 437 (698)
T ss_pred eeeec-cceeeeccEEEeccCCcE----EEEEEEeeccccccceE----eeEEEEEee------------------ccCC
Confidence 21110 112234456789999999 988776544332 2221 123677776 2222
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
......-...+-..+|-|.|++++..+.... ...-+.|-+....+.. .|....+.
T Consensus 438 pve~velke~vi~FaWEP~gdkF~vi~g~~~------k~tvsfY~~e~~~~~~-~lVk~~dk------------------ 492 (698)
T KOG2314|consen 438 PVEVVELKESVIAFAWEPHGDKFAVISGNTV------KNTVSFYAVETNIKKP-SLVKELDK------------------ 492 (698)
T ss_pred CceeeecchheeeeeeccCCCeEEEEEcccc------ccceeEEEeecCCCch-hhhhhhcc------------------
Confidence 2222223345677899999999999887652 2334455555322222 22111110
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeEEEeecCCEEEEEEeCC
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVSSSP 398 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~~~~~l~~~~~~~ 398 (715)
..-..+.|+|.|+.+++.........|+.+|++-...+.+..... ..+...|+|.|+.++..++..
T Consensus 493 ~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 493 KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehh
Confidence 012466799999988887776556678888886434444433322 234457888888777655443
No 231
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=98.29 E-value=1.2e-06 Score=97.42 Aligned_cols=127 Identities=24% Similarity=0.281 Sum_probs=85.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cc--hHHHHHHHhCCcEEEEEcCCC-CCCCchhhhhcCCCCCCccc
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SY--SKSLAFLSSVGYSLLIVNYRG-SLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~--~~~~~~la~~G~~vi~~d~rG-~~~~g~~~~~~~~~~~~~~~ 540 (715)
+...+|.|......+ .|++|++|||+...+.. .+ ......+..+..+|+.++||. .-|+........+++++
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g--- 172 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG--- 172 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc---
Confidence 445688887532223 99999999988765442 22 223334566789999999994 22222222122234444
Q ss_pred hhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCcc
Q 005093 541 VNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 595 (715)
Q Consensus 541 ~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~ 595 (715)
..|+..|++|+.++ ..-|+++|.|+|||+||..+..+... ...+|..+|..++..
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 67999999999875 34699999999999999998877653 124788888777653
No 232
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=98.29 E-value=1.9e-05 Score=84.14 Aligned_cols=203 Identities=12% Similarity=0.016 Sum_probs=123.4
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+..+.|.+...+||||.+.|+-.+++ .+..+|.+. .....+.. . +... ++-.+.|+|-|=++|-.+-+
T Consensus 447 L~GH~GPVyg~sFsPd~rfLlScSED--~svRLWsl~--t~s~~V~y-~-GH~~------PVwdV~F~P~GyYFatas~D 514 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFLLSCSED--SSVRLWSLD--TWSCLVIY-K-GHLA------PVWDVQFAPRGYYFATASHD 514 (707)
T ss_pred eecCCCceeeeeecccccceeeccCC--cceeeeecc--cceeEEEe-c-CCCc------ceeeEEecCCceEEEecCCC
Confidence 44455778889999999998765553 333444432 11222222 1 2211 12467789988444333322
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
.+ ...|..................+-+.|-|+..-...+.....+.+||.-+|...++- +.....+..++|||+|+.
T Consensus 515 ~t--ArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF-~GH~~~V~al~~Sp~Gr~ 591 (707)
T KOG0263|consen 515 QT--ARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF-TGHKGPVTALAFSPCGRY 591 (707)
T ss_pred ce--eeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe-cCCCCceEEEEEcCCCce
Confidence 22 234444333333334444445555567776422223334578999999999877772 233446889999999998
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC-CCceecCCCCccccceeEcCCCCeEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
|+-.+ ....|.++|+ .+ .....+-.+.+.+.+.+||.||..||
T Consensus 592 ----LaSg~---------------ed~~I~iWDl-----------------~~~~~v~~l~~Ht~ti~SlsFS~dg~vLa 635 (707)
T KOG0263|consen 592 ----LASGD---------------EDGLIKIWDL-----------------ANGSLVKQLKGHTGTIYSLSFSRDGNVLA 635 (707)
T ss_pred ----Eeecc---------------cCCcEEEEEc-----------------CCCcchhhhhcccCceeEEEEecCCCEEE
Confidence 77654 2235778887 44 44556667777899999999999888
Q ss_pred EEecCCCCCCCCccccceeEeeecCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
-.+.+. +|-++|+..
T Consensus 636 sgg~Dn-----------sV~lWD~~~ 650 (707)
T KOG0263|consen 636 SGGADN-----------SVRLWDLTK 650 (707)
T ss_pred ecCCCC-----------eEEEEEchh
Confidence 666553 466667654
No 233
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.28 E-value=1.7e-05 Score=71.65 Aligned_cols=181 Identities=17% Similarity=0.198 Sum_probs=107.3
Q ss_pred EEEEEcC-CCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 483 LIVVLHG-GPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 483 ~vv~iHG-g~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
++|++-| |+|. ..-...+..|+++|+.|+.+|-+- | |.+ .....+...|+.+.+++..++ ...++
T Consensus 4 ~~v~~SGDgGw~---~~d~~~a~~l~~~G~~VvGvdsl~---Y---fw~---~rtP~~~a~Dl~~~i~~y~~~--w~~~~ 69 (192)
T PF06057_consen 4 LAVFFSGDGGWR---DLDKQIAEALAKQGVPVVGVDSLR---Y---FWS---ERTPEQTAADLARIIRHYRAR--WGRKR 69 (192)
T ss_pred EEEEEeCCCCch---hhhHHHHHHHHHCCCeEEEechHH---H---Hhh---hCCHHHHHHHHHHHHHHHHHH--hCCce
Confidence 5677777 4433 122346789999999999999432 1 111 122233477888888887776 35689
Q ss_pred EEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHh
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHS 637 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (715)
+.|+|+|+|+-+.-.+..+.|. +++.+++++|......... . ...++. .... ..
T Consensus 70 vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeih---v-----~~wlg~---------~~~~-----~~ 127 (192)
T PF06057_consen 70 VVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIH---V-----SGWLGM---------GGDD-----AA 127 (192)
T ss_pred EEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEE---h-----hhhcCC---------CCCc-----cc
Confidence 9999999999888888877774 6788888877532110000 0 011111 0000 01
Q ss_pred cCchhhccCCC-CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 638 KSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 638 ~sp~~~~~~i~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..+...+.++. .|+++++|++|.-.... .++. ..++.+..||++| |... -....+.|++-++
T Consensus 128 ~~~~pei~~l~~~~v~CiyG~~E~d~~cp-------~l~~--~~~~~i~lpGgHH-fd~d--y~~La~~Il~~l~ 190 (192)
T PF06057_consen 128 YPVIPEIAKLPPAPVQCIYGEDEDDSLCP-------SLRQ--PGVEVIALPGGHH-FDGD--YDALAKRILDALK 190 (192)
T ss_pred CCchHHHHhCCCCeEEEEEcCCCCCCcCc-------cccC--CCcEEEEcCCCcC-CCCC--HHHHHHHHHHHHh
Confidence 12333444554 58999999988642211 1322 3577889998544 6433 2345666766654
No 234
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.25 E-value=0.00014 Score=74.00 Aligned_cols=215 Identities=13% Similarity=0.048 Sum_probs=110.8
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
...++||||++|++. +.+ ....+-.++ ..++.......+... .+|..+.-.....+.||+.+.+..+........
T Consensus 108 ~~~~ls~dgk~l~V~-n~~-p~~~V~VvD~~~~kvv~ei~vp~~~--~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~ 183 (352)
T TIGR02658 108 WMTSLTPDNKTLLFY-QFS-PSPAVGVVDLEGKAFVRMMDVPDCY--HIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIK 183 (352)
T ss_pred ceEEECCCCCEEEEe-cCC-CCCEEEEEECCCCcEEEEEeCCCCc--EEEEecCCccEEEeecCceEEEEecCCCceEEe
Confidence 467899999988644 432 234566666 555555555554322 233333335567788998777655443221100
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC----CCC----C---CccceEEEec
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG----IPK----S---LSVGQVVWAP 193 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~----~~~----~---~~~~~~~~sp 193 (715)
....+...... ......|.+..|..+.-.....|+++|+.+.+...... +.. . .....++++|
T Consensus 184 ~~~vf~~~~~~------v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~ 257 (352)
T TIGR02658 184 PTEVFHPEDEY------LINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHR 257 (352)
T ss_pred eeeeecCCccc------cccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcC
Confidence 00000000000 00011222211322222233889999976554333210 111 1 1222488999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGK 273 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~ 273 (715)
||++ ++....... +..+ ....++|+++|+ ++++...-..-........+||||+
T Consensus 258 dg~~----lyV~~~~~~--~~th---k~~~~~V~ViD~-----------------~t~kvi~~i~vG~~~~~iavS~Dgk 311 (352)
T TIGR02658 258 ARDR----IYLLADQRA--KWTH---KTASRFLFVVDA-----------------KTGKRLRKIELGHEIDSINVSQDAK 311 (352)
T ss_pred CCCE----EEEEecCCc--cccc---cCCCCEEEEEEC-----------------CCCeEEEEEeCCCceeeEEECCCCC
Confidence 9997 555332111 0001 112248999997 6666544322334577899999999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
.++|..+..+ ..|.++|..+++.
T Consensus 312 p~lyvtn~~s---------~~VsViD~~t~k~ 334 (352)
T TIGR02658 312 PLLYALSTGD---------KTLYIFDAETGKE 334 (352)
T ss_pred eEEEEeCCCC---------CcEEEEECcCCeE
Confidence 6667776531 3589999887654
No 235
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=98.24 E-value=0.00016 Score=70.42 Aligned_cols=213 Identities=15% Similarity=0.149 Sum_probs=126.4
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
|..+.+.+-+.+.+|+..++| +-..+ +...+|.+..+..+-.++.....+ ....||-||.+||-.
T Consensus 60 F~~H~~svFavsl~P~~~l~a-TGGgD-D~AflW~~~~ge~~~eltgHKDSV----------t~~~FshdgtlLATG--- 124 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHPNNNLVA-TGGGD-DLAFLWDISTGEFAGELTGHKDSV----------TCCSFSHDGTLLATG--- 124 (399)
T ss_pred hhhcCCceEEEEeCCCCceEE-ecCCC-ceEEEEEccCCcceeEecCCCCce----------EEEEEccCceEEEec---
Confidence 444557788999999666554 32211 333444443333333343333333 799999999988762
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
. -...|.++...+|..+... ...-..+..+.|.|-+.
T Consensus 125 ------------------------------------d-----msG~v~v~~~stg~~~~~~-~~e~~dieWl~WHp~a~- 161 (399)
T KOG0296|consen 125 ------------------------------------D-----MSGKVLVFKVSTGGEQWKL-DQEVEDIEWLKWHPRAH- 161 (399)
T ss_pred ------------------------------------C-----CCccEEEEEcccCceEEEe-ecccCceEEEEeccccc-
Confidence 1 2366899999888766541 11223466789999776
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
|++.+. ..+.+|.+.++ +.+..+.+..+......-.|+||||+++-
T Consensus 162 ----illAG~--------------~DGsvWmw~ip----------------~~~~~kv~~Gh~~~ct~G~f~pdGKr~~t 207 (399)
T KOG0296|consen 162 ----ILLAGS--------------TDGSVWMWQIP----------------SQALCKVMSGHNSPCTCGEFIPDGKRILT 207 (399)
T ss_pred ----EEEeec--------------CCCcEEEEECC----------------CcceeeEecCCCCCcccccccCCCceEEE
Confidence 455442 22368888872 33556666666667888899999999876
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCC-CcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
...+ ..|.++++.+++.. .++... .. ....+....++. .++..+..+
T Consensus 208 gy~d-----------gti~~Wn~ktg~p~~~~~~~e-----------~~--------~~~~~~~~~~~~-~~~~g~~e~- 255 (399)
T KOG0296|consen 208 GYDD-----------GTIIVWNPKTGQPLHKITQAE-----------GL--------ELPCISLNLAGS-TLTKGNSEG- 255 (399)
T ss_pred EecC-----------ceEEEEecCCCceeEEecccc-----------cC--------cCCccccccccc-eeEeccCCc-
Confidence 5544 24888998887642 111110 00 112333455555 334444333
Q ss_pred eEEEEEECCCCcEEEecCC
Q 005093 357 QVIISVNVSSGELLRITPA 375 (715)
Q Consensus 357 ~~l~~~d~~tg~~~~l~~~ 375 (715)
..+.++..+|++.....+
T Consensus 256 -~~~~~~~~sgKVv~~~n~ 273 (399)
T KOG0296|consen 256 -VACGVNNGSGKVVNCNNG 273 (399)
T ss_pred -cEEEEccccceEEEecCC
Confidence 455566667887776664
No 236
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.23 E-value=5e-05 Score=78.25 Aligned_cols=50 Identities=14% Similarity=0.246 Sum_probs=41.9
Q ss_pred hccCCCCcEEEEeeCCCCcCCchHHHH-------HHHHHHHcCCcEEEEEeCCCCcc
Q 005093 643 HISKVKTPTIFLLGAQDLRVPVSNGLQ-------YARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 643 ~~~~i~~P~Lii~G~~D~~v~~~~~~~-------~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
.+++|++|++++.+..|.+.|+.|+.. -.+.++.+|..+.+.+.+..||-
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 467889999999999999999999843 34556777888889999999994
No 237
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.23 E-value=7.5e-05 Score=77.65 Aligned_cols=198 Identities=16% Similarity=0.196 Sum_probs=108.7
Q ss_pred ceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC
Q 005093 55 SKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 133 (715)
Q Consensus 55 ~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 133 (715)
+-|.|+.++ +...+..++ .+.+....+......| ..+.+||||++++.. ...
T Consensus 5 ~~l~~V~~~--~~~~v~viD~~t~~~~~~i~~~~~~h---------~~~~~s~Dgr~~yv~-~rd--------------- 57 (369)
T PF02239_consen 5 GNLFYVVER--GSGSVAVIDGATNKVVARIPTGGAPH---------AGLKFSPDGRYLYVA-NRD--------------- 57 (369)
T ss_dssp GGEEEEEEG--GGTEEEEEETTT-SEEEEEE-STTEE---------EEEE-TT-SSEEEEE-ETT---------------
T ss_pred ccEEEEEec--CCCEEEEEECCCCeEEEEEcCCCCce---------eEEEecCCCCEEEEE-cCC---------------
Confidence 345666665 334677777 5555555555433332 467899999987664 321
Q ss_pred CCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccce
Q 005093 134 SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRK 213 (715)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~ 213 (715)
..|.++|+.+++...- .........+++||||+. ++....
T Consensus 58 ----------------------------g~vsviD~~~~~~v~~--i~~G~~~~~i~~s~DG~~----~~v~n~------ 97 (369)
T PF02239_consen 58 ----------------------------GTVSVIDLATGKVVAT--IKVGGNPRGIAVSPDGKY----VYVANY------ 97 (369)
T ss_dssp ----------------------------SEEEEEETTSSSEEEE--EE-SSEEEEEEE--TTTE----EEEEEE------
T ss_pred ----------------------------CeEEEEECCcccEEEE--EecCCCcceEEEcCCCCE----EEEEec------
Confidence 5699999999876543 233445678999999996 544432
Q ss_pred eeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCC-------CccccceeEcCCCCeEEEEecCCCCC
Q 005093 214 LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-------ISSAFFPRFSPDGKFLVFLSAKSSVD 285 (715)
Q Consensus 214 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~-------~~~~~~~~~spdg~~l~~~~~~~~~~ 285 (715)
..+.+.++|. ++.+.. .+... ........-||+....++.-.+.
T Consensus 98 --------~~~~v~v~D~-----------------~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~--- 149 (369)
T PF02239_consen 98 --------EPGTVSVIDA-----------------ETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDT--- 149 (369)
T ss_dssp --------ETTEEEEEET-----------------TT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTT---
T ss_pred --------CCCceeEecc-----------------ccccceeecccccccccccCCCceeEEecCCCCEEEEEEccC---
Confidence 2237888886 444433 22211 11234455678877666555443
Q ss_pred CCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 286 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 286 ~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
.+++++|.........+. +. .+.+ +....|+||+++++..... ...+..+|.+
T Consensus 150 -------~~I~vVdy~d~~~~~~~~--------i~---~g~~-------~~D~~~dpdgry~~va~~~--sn~i~viD~~ 202 (369)
T PF02239_consen 150 -------GEIWVVDYSDPKNLKVTT--------IK---VGRF-------PHDGGFDPDGRYFLVAANG--SNKIAVIDTK 202 (369)
T ss_dssp -------TEEEEEETTTSSCEEEEE--------EE-----TT-------EEEEEE-TTSSEEEEEEGG--GTEEEEEETT
T ss_pred -------CeEEEEEeccccccceee--------ec---cccc-------ccccccCcccceeeecccc--cceeEEEeec
Confidence 469999876643211110 00 0111 2345699999977665433 3488889998
Q ss_pred CCcEEEecC
Q 005093 366 SGELLRITP 374 (715)
Q Consensus 366 tg~~~~l~~ 374 (715)
+++...+..
T Consensus 203 ~~k~v~~i~ 211 (369)
T PF02239_consen 203 TGKLVALID 211 (369)
T ss_dssp TTEEEEEEE
T ss_pred cceEEEEee
Confidence 888776543
No 238
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.22 E-value=0.00012 Score=74.30 Aligned_cols=152 Identities=16% Similarity=0.181 Sum_probs=87.5
Q ss_pred CccchhhHHHHHHHHHHcCCCC--CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh--cc-CCCCCCcee
Q 005093 537 GSQDVNDVLTAIDHVIDMGLAN--PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM--VG-TTDIPDWCY 611 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--~~-~~~~~~~~~ 611 (715)
|-..+-|++.|+.++..+..-- .-++.++|+|+||+++...|.-.|..+.+++--++.+-.... .+ ..+...+..
T Consensus 159 GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~ 238 (403)
T PF11144_consen 159 GIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYIC 238 (403)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccc
Confidence 3334567788888887763222 248999999999999999999899999999987776542111 00 001000000
Q ss_pred eecc---CC----CCCCCCCCC----CC-h-hhHHHHH---hcCchhhccCC--CCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 612 VESY---GS----KGKDSFTES----PS-V-EDLTRFH---SKSPISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 612 ~~~~---~~----~~~~~~~~~----~~-~-~~~~~~~---~~sp~~~~~~i--~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
.... .. ...+-+|.. |. . ......+ ....+....+. ++-.+..|+..|..+|.++-.++++.
T Consensus 239 ~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~ 318 (403)
T PF11144_consen 239 SGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEI 318 (403)
T ss_pred cccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHH
Confidence 0000 00 000001100 00 0 0011111 11111112222 23456689999999999999999999
Q ss_pred HHHcCCcEEEEEeCC
Q 005093 674 LREKGVETKVIVFPN 688 (715)
Q Consensus 674 l~~~g~~~~~~~~~~ 688 (715)
+++.|.+++++.+.+
T Consensus 319 l~~lgfda~l~lIkd 333 (403)
T PF11144_consen 319 LKNLGFDATLHLIKD 333 (403)
T ss_pred HHHcCCCeEEEEecC
Confidence 999999999998843
No 239
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.22 E-value=1.8e-05 Score=76.78 Aligned_cols=209 Identities=12% Similarity=0.092 Sum_probs=112.0
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHH-hCCcE----EEEEcCCCCCCCchhhhh----c----C-CCCC---CccchhhH
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLS-SVGYS----LLIVNYRGSLGFGEEALQ----S----L-PGKV---GSQDVNDV 544 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la-~~G~~----vi~~d~rG~~~~g~~~~~----~----~-~~~~---~~~~~~d~ 544 (715)
-..||+||..++ ...+..++..+. +.|.+ ++.++.-|.-.+...+.. + . ..+. ......-+
T Consensus 12 tPTifihG~~gt--~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 12 TPTIFIHGYGGT--ANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp EEEEEE--TTGG--CCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CcEEEECCCCCC--hhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 347899995544 557788888886 66643 444444342111111100 0 0 0111 01123445
Q ss_pred HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC-----ceeEEEecCCcchhhhhccCCCCCCceeeeccCCCC
Q 005093 545 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 619 (715)
Q Consensus 545 ~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (715)
..++.+|.+++.+ +++-++||||||..++.++..+.. .+..+|.+++.++....... ..... .+.
T Consensus 90 ~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~--~~~~~---~~~--- 159 (255)
T PF06028_consen 90 KKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND--DQNQN---DLN--- 159 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC---TTTT----CS---
T ss_pred HHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc--cchhh---hhc---
Confidence 6778888888654 789999999999999998887522 46777777776653321110 00000 000
Q ss_pred CCCCCCCCC--hhhHHHHHhcCchhhccCCCCcEEEEeeC------CCCcCCchHHHHHHHHHHHcCCcEEEEEeCC--C
Q 005093 620 KDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--D 689 (715)
Q Consensus 620 ~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~--~ 689 (715)
...|. ......+...- ...+ .-.+.+|-|.|. .|-.||...+..+...++......+-.++.| +
T Consensus 160 ----~~gp~~~~~~y~~l~~~~-~~~~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a 233 (255)
T PF06028_consen 160 ----KNGPKSMTPMYQDLLKNR-RKNF-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDA 233 (255)
T ss_dssp ----TT-BSS--HHHHHHHHTH-GGGS-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGG
T ss_pred ----ccCCcccCHHHHHHHHHH-HhhC-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCC
Confidence 00011 11112221110 0111 123579999998 8899999888888777777666777777766 4
Q ss_pred CccCCCCCchHHHHHHHHHHH
Q 005093 690 VHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 690 ~H~~~~~~~~~~~~~~i~~wl 710 (715)
.|.-. +++. ++.+.|.+||
T Consensus 234 ~HS~L-heN~-~V~~~I~~FL 252 (255)
T PF06028_consen 234 QHSQL-HENP-QVDKLIIQFL 252 (255)
T ss_dssp SCCGG-GCCH-HHHHHHHHHH
T ss_pred ccccC-CCCH-HHHHHHHHHh
Confidence 78654 3443 6777888876
No 240
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.22 E-value=0.00015 Score=73.90 Aligned_cols=151 Identities=15% Similarity=0.156 Sum_probs=103.3
Q ss_pred cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecC-Ccchhhhhcc--CCCCC-Ccee-eeccCCCCCCCCCCCCC
Q 005093 554 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN-PLCNLALMVG--TTDIP-DWCY-VESYGSKGKDSFTESPS 628 (715)
Q Consensus 554 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~-~~~~~~~~~~--~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 628 (715)
...++.++.+|.|.|==|..+..+|+ .++|++|++.+. ++.++..... ..... .|.+ ...|...+.......
T Consensus 166 ~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~t-- 242 (367)
T PF10142_consen 166 KFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDT-- 242 (367)
T ss_pred hcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCC--
Confidence 34567899999999999999988887 567888887543 3333321110 00011 1211 111111122122222
Q ss_pred hhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHH
Q 005093 629 VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 708 (715)
Q Consensus 629 ~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 708 (715)
....+...-.+|+.+.+++..|-||+.|..|+...++.+.-+++.|.. +..+.++|+++|+... .++...+..
T Consensus 243 p~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~~~~----~~~~~~l~~ 315 (367)
T PF10142_consen 243 PEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHSLIG----SDVVQSLRA 315 (367)
T ss_pred HHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcccch----HHHHHHHHH
Confidence 244455667899999999999999999999999999999999999964 5678999999998875 467788888
Q ss_pred HHHHhc
Q 005093 709 WFKKYC 714 (715)
Q Consensus 709 wl~~~l 714 (715)
|+...+
T Consensus 316 f~~~~~ 321 (367)
T PF10142_consen 316 FYNRIQ 321 (367)
T ss_pred HHHHHH
Confidence 887643
No 241
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=98.20 E-value=0.00028 Score=67.74 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=62.1
Q ss_pred CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCc
Q 005093 260 ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 339 (715)
Q Consensus 260 ~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 339 (715)
...+...+||+|..+++- .++. -..-||++|++..+...+.... ..+..+.
T Consensus 318 k~g~g~lafs~Ds~y~aT-rnd~--------~PnalW~Wdlq~l~l~avLiQk--------------------~piraf~ 368 (447)
T KOG4497|consen 318 KCGAGKLAFSCDSTYAAT-RNDK--------YPNALWLWDLQNLKLHAVLIQK--------------------HPIRAFE 368 (447)
T ss_pred ccccceeeecCCceEEee-ecCC--------CCceEEEEechhhhhhhhhhhc--------------------cceeEEE
Confidence 345788999999987753 3331 2346999999886653332111 1244567
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
|.|.--++++- .+..+||.+-+..-....+....-++....+..+|..++...
T Consensus 369 WdP~~prL~vc---tg~srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~ 421 (447)
T KOG4497|consen 369 WDPGRPRLVVC---TGKSRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVLCG 421 (447)
T ss_pred eCCCCceEEEE---cCCceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEEEc
Confidence 88876666554 345689999986544444444333333345555666655443
No 242
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.19 E-value=1.7e-05 Score=79.72 Aligned_cols=90 Identities=14% Similarity=0.241 Sum_probs=65.3
Q ss_pred hHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh
Q 005093 500 SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG 579 (715)
Q Consensus 500 ~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 579 (715)
...+..|.++|..|+.++.++.. .+.. ..++.....+.+..+++.+++.. ..++|-++|+|.||.++..+++
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd-~~~~-----~~~~edYi~e~l~~aid~v~~it--g~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPD-ASLA-----AKNLEDYILEGLSEAIDTVKDIT--GQKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCch-Hhhh-----hccHHHHHHHHHHHHHHHHHHHh--CccccceeeEecchHHHHHHHH
Confidence 34788999999999999988622 1111 12222333467778888887763 3478999999999999999888
Q ss_pred hCCCc-eeEEEecCCcchh
Q 005093 580 QAPDK-FVAAAARNPLCNL 597 (715)
Q Consensus 580 ~~p~~-~~~~v~~~~~~~~ 597 (715)
.++.+ ++.+.......|+
T Consensus 201 ~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 201 LMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred hhhhcccccceeeecchhh
Confidence 88776 8888777666554
No 243
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.19 E-value=0.00015 Score=78.37 Aligned_cols=188 Identities=16% Similarity=0.198 Sum_probs=110.5
Q ss_pred ccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEe-cCcc
Q 005093 10 LANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFH-VPQT 88 (715)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 88 (715)
-.-..+..|+++|+...+.....|...+ ..+....|+|+|+.|+..+.. +...+|.+ .+++..+.+. ....
T Consensus 219 ~s~s~D~tiriwd~~~~~~~~~~l~gH~-----~~v~~~~f~p~g~~i~Sgs~D--~tvriWd~-~~~~~~~~l~~hs~~ 290 (456)
T KOG0266|consen 219 LSGSDDKTLRIWDLKDDGRNLKTLKGHS-----TYVTSVAFSPDGNLLVSGSDD--GTVRIWDV-RTGECVRKLKGHSDG 290 (456)
T ss_pred EEecCCceEEEeeccCCCeEEEEecCCC-----CceEEEEecCCCCEEEEecCC--CcEEEEec-cCCeEEEeeeccCCc
Confidence 3344566777777844433333333333 668999999999766655443 33333333 3344444433 2333
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
+ +.+.|++||..|+-.+. ...|.+||
T Consensus 291 i----------s~~~f~~d~~~l~s~s~--------------------------------------------d~~i~vwd 316 (456)
T KOG0266|consen 291 I----------SGLAFSPDGNLLVSASY--------------------------------------------DGTIRVWD 316 (456)
T ss_pred e----------EEEEECCCCCEEEEcCC--------------------------------------------CccEEEEE
Confidence 3 78999999998877522 26799999
Q ss_pred ccCCceE---eecCCCCCC-ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhh
Q 005093 169 INSGEVQ---AVKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 244 (715)
Q Consensus 169 ~~~g~~~---~l~~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (715)
+.++..+ .+. ..... .+....|+|+|+. |+-.. .+..+-.+|+.
T Consensus 317 ~~~~~~~~~~~~~-~~~~~~~~~~~~fsp~~~~----ll~~~---------------~d~~~~~w~l~------------ 364 (456)
T KOG0266|consen 317 LETGSKLCLKLLS-GAENSAPVTSVQFSPNGKY----LLSAS---------------LDRTLKLWDLR------------ 364 (456)
T ss_pred CCCCceeeeeccc-CCCCCCceeEEEECCCCcE----EEEec---------------CCCeEEEEEcc------------
Confidence 9999832 332 11122 5788999999997 66544 11244455541
Q ss_pred ccCCCCCCceecCCCCc---cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC
Q 005093 245 ESSSEDLPVVNLTESIS---SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 306 (715)
Q Consensus 245 ~~~~~~~~~~~lt~~~~---~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 306 (715)
........+.... ....+..+++|+.++-.+.+ ..++++++.++...
T Consensus 365 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d-----------~~v~~~~~~s~~~~ 414 (456)
T KOG0266|consen 365 ----SGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSED-----------GSVYVWDSSSGGIL 414 (456)
T ss_pred ----CCcceeeecccCCcceeEecccccCCCCeEEEEeCC-----------ceEEEEeCCccchh
Confidence 2222223332222 34566668888877644444 24889998876553
No 244
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=98.17 E-value=0.00028 Score=67.42 Aligned_cols=242 Identities=14% Similarity=0.119 Sum_probs=132.5
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCC-ccEEEEecCc----cccccccCCCcccceeecCCCCeEEEEe
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS-QLEKEFHVPQ----TVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
+-.+..+|+||-+.+++.-.++ ++-.+|.+. .+| -....+..+. ..| .+ .+.++.....+++|+-.+
T Consensus 133 dhpT~V~FapDc~s~vv~~~~g-~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh-~v----~~i~iGiA~~~k~imsas 206 (420)
T KOG2096|consen 133 DHPTRVVFAPDCKSVVVSVKRG-NKLCVYKLVKKTDGSGSHHFVHIDNLEFERKH-QV----DIINIGIAGNAKYIMSAS 206 (420)
T ss_pred CCceEEEECCCcceEEEEEccC-CEEEEEEeeecccCCCCcccccccccccchhc-cc----ceEEEeecCCceEEEEec
Confidence 5678999999999998876654 444455555 222 2222221110 000 00 112445555555555433
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
. ...|.+|++++..+..+ ..........+.||||
T Consensus 207 ~--------------------------------------------dt~i~lw~lkGq~L~~i--dtnq~~n~~aavSP~G 240 (420)
T KOG2096|consen 207 L--------------------------------------------DTKICLWDLKGQLLQSI--DTNQSSNYDAAVSPDG 240 (420)
T ss_pred C--------------------------------------------CCcEEEEecCCceeeee--ccccccccceeeCCCC
Confidence 2 26699999996666666 3333456678899999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC------ceecCCCCccccceeEc
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP------VVNLTESISSAFFPRFS 269 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~lt~~~~~~~~~~~s 269 (715)
+. |+.++-..+ ..+|..=+. ..|+ .-.|..+...+...+||
T Consensus 241 RF----ia~~gFTpD-------------VkVwE~~f~----------------kdG~fqev~rvf~LkGH~saV~~~aFs 287 (420)
T KOG2096|consen 241 RF----IAVSGFTPD-------------VKVWEPIFT----------------KDGTFQEVKRVFSLKGHQSAVLAAAFS 287 (420)
T ss_pred cE----EEEecCCCC-------------ceEEEEEec----------------cCcchhhhhhhheeccchhheeeeeeC
Confidence 98 887763322 234433220 2222 22344455568889999
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecC---CCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCE
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP---TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 346 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~---~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~ 346 (715)
++.++++-++.+. ..+||-.|+. +...+.|-.+. .++-.. + ...-.+..+|+|+.
T Consensus 288 n~S~r~vtvSkDG---------~wriwdtdVrY~~~qDpk~Lk~g~---~pl~aa---g-------~~p~RL~lsP~g~~ 345 (420)
T KOG2096|consen 288 NSSTRAVTVSKDG---------KWRIWDTDVRYEAGQDPKILKEGS---APLHAA---G-------SEPVRLELSPSGDS 345 (420)
T ss_pred CCcceeEEEecCC---------cEEEeeccceEecCCCchHhhcCC---cchhhc---C-------CCceEEEeCCCCcE
Confidence 9999998888763 2345533321 11112121110 000000 0 12235668999986
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEEecCC--CCCceeEEEeecCCEEEEEE
Q 005093 347 MLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 347 l~~~~~~~~~~~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~~~~~l~~~~ 395 (715)
+.++. + ..|-.+..++|+...-... ...++..+|+++|..++...
T Consensus 346 lA~s~--g--s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG 392 (420)
T KOG2096|consen 346 LAVSF--G--SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG 392 (420)
T ss_pred EEeec--C--CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec
Confidence 55533 2 3455566667776554332 22466678899988777554
No 245
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.16 E-value=0.00018 Score=75.16 Aligned_cols=227 Identities=15% Similarity=0.176 Sum_probs=141.6
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
....|| ....||..-.. .+| +| ..+....+.+.. .+ .+..+.|+++|++|+....
T Consensus 181 nlldWs-s~n~laValg~-----~vy-lW~~~s~~v~~l~~~~---~~------~vtSv~ws~~G~~LavG~~------- 237 (484)
T KOG0305|consen 181 NLLDWS-SANVLAVALGQ-----SVY-LWSASSGSVTELCSFG---EE------LVTSVKWSPDGSHLAVGTS------- 237 (484)
T ss_pred hHhhcc-cCCeEEEEecc-----eEE-EEecCCCceEEeEecC---CC------ceEEEEECCCCCEEEEeec-------
Confidence 446778 44455543221 234 56 567777776652 11 2389999999999999532
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
...|.+||.+..+...-........+..++|. .. ++
T Consensus 238 -------------------------------------~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~---~~----~l 273 (484)
T KOG0305|consen 238 -------------------------------------DGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN---SS----VL 273 (484)
T ss_pred -------------------------------------CCeEEEEehhhccccccccCCcCceeEEEecc---Cc----eE
Confidence 36699999876554332101134457788898 23 44
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
-++. +...|..+|+ ....... .+..+...+....|++||++||-..+++
T Consensus 274 ssGs--------------r~~~I~~~dv----------------R~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN 323 (484)
T KOG0305|consen 274 SSGS--------------RDGKILNHDV----------------RISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDN 323 (484)
T ss_pred EEec--------------CCCcEEEEEE----------------ecchhhhhhhhcccceeeeeEECCCCCeeccCCCcc
Confidence 4442 3335666665 1222222 2555666788999999999997555443
Q ss_pred CCCCCCccccceeEeeecCCCCC-CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 283 SVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
.++++|....+. ..++... ..+..++|+|-..-|+.+........|..
T Consensus 324 -----------~~~Iwd~~~~~p~~~~~~H~--------------------aAVKA~awcP~q~~lLAsGGGs~D~~i~f 372 (484)
T KOG0305|consen 324 -----------VVFIWDGLSPEPKFTFTEHT--------------------AAVKALAWCPWQSGLLATGGGSADRCIKF 372 (484)
T ss_pred -----------ceEeccCCCccccEEEeccc--------------------eeeeEeeeCCCccCceEEcCCCcccEEEE
Confidence 477777633222 2222211 13446678886666888877666778888
Q ss_pred EECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCC
Q 005093 362 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 362 ~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
+|..+|+..........+....|++..++|+.+..-...
T Consensus 373 wn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n 411 (484)
T KOG0305|consen 373 WNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSEN 411 (484)
T ss_pred EEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCC
Confidence 999999988877766656667889998888766544433
No 246
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.14 E-value=0.00063 Score=79.41 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=56.4
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEec-CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp-dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|.+||+.+++..... ......+..+.|+| |+. ++.++. .+..|.++|+
T Consensus 555 g~v~lWd~~~~~~~~~~-~~H~~~V~~l~~~p~~~~-----~L~Sgs--------------~Dg~v~iWd~--------- 605 (793)
T PLN00181 555 GVVQVWDVARSQLVTEM-KEHEKRVWSIDYSSADPT-----LLASGS--------------DDGSVKLWSI--------- 605 (793)
T ss_pred CeEEEEECCCCeEEEEe-cCCCCCEEEEEEcCCCCC-----EEEEEc--------------CCCEEEEEEC---------
Confidence 66999999887654331 23334577899997 555 444442 2235777776
Q ss_pred hhhhccCCCCCCc-eecCCCCccccceeE-cCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 241 LELKESSSEDLPV-VNLTESISSAFFPRF-SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 241 ~~~~~~~~~~~~~-~~lt~~~~~~~~~~~-spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
.++.. ..+. ....+....| +++|+.|+..+.+. .|+++|+.+..
T Consensus 606 --------~~~~~~~~~~-~~~~v~~v~~~~~~g~~latgs~dg-----------~I~iwD~~~~~ 651 (793)
T PLN00181 606 --------NQGVSIGTIK-TKANICCVQFPSESGRSLAFGSADH-----------KVYYYDLRNPK 651 (793)
T ss_pred --------CCCcEEEEEe-cCCCeEEEEEeCCCCCEEEEEeCCC-----------eEEEEECCCCC
Confidence 33332 2332 2234566777 46788887766542 48888886543
No 247
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.13 E-value=0.00015 Score=64.05 Aligned_cols=140 Identities=12% Similarity=0.085 Sum_probs=91.4
Q ss_pred CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 535 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
+|.....+|..+.++..+... ++.++|++||.|+..++.++.+....++++++++|..--...
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~-------------- 99 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPE-------------- 99 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccc--------------
Confidence 454555777777766555542 456999999999999999998776789999999986321100
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 694 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 694 (715)
........++|.. ..++.-|.++++..+|+.|+++.+..+.++... .++....+||-..
T Consensus 100 ---------------~~~~~~~tf~~~p-~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs-----~lv~~g~~GHiN~ 158 (181)
T COG3545 100 ---------------IRPKHLMTFDPIP-REPLPFPSVVVASRNDPYVSYEHAEDLANAWGS-----ALVDVGEGGHINA 158 (181)
T ss_pred ---------------cchhhccccCCCc-cccCCCceeEEEecCCCCCCHHHHHHHHHhccH-----hheecccccccch
Confidence 0001111122211 233446899999999999999999999888854 4777888888432
Q ss_pred --CCCchHHHHHHHHHHHHH
Q 005093 695 --RPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 695 --~~~~~~~~~~~i~~wl~~ 712 (715)
......+.+..+.+++.+
T Consensus 159 ~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 159 ESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred hhcCCCcHHHHHHHHHHhhh
Confidence 123333445555555543
No 248
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=98.12 E-value=1.9e-05 Score=84.24 Aligned_cols=194 Identities=18% Similarity=0.169 Sum_probs=113.7
Q ss_pred cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCc-cCceEEEEEccCCceEe
Q 005093 98 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQA 176 (715)
Q Consensus 98 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~l~~~~~~~g~~~~ 176 (715)
++-+.+||||.++|+-.+++...+ .|.+..............+.-.+.|.|. |-.++.- ...+-.+|..+...+.+
T Consensus 453 PVyg~sFsPd~rfLlScSED~svR--LWsl~t~s~~V~y~GH~~PVwdV~F~P~-GyYFatas~D~tArLWs~d~~~PlR 529 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLLSCSEDSSVR--LWSLDTWSCLVIYKGHLAPVWDVQFAPR-GYYFATASHDQTARLWSTDHNKPLR 529 (707)
T ss_pred ceeeeeecccccceeeccCCccee--eeecccceeEEEecCCCcceeeEEecCC-ceEEEecCCCceeeeeecccCCchh
Confidence 446899999999998888876654 3443333222222222223333344444 3222211 12333555555555555
Q ss_pred ecCCCCCC-ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee
Q 005093 177 VKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN 255 (715)
Q Consensus 177 l~~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (715)
+ ..+.. .+.-+.|.|+... ++ ++.. .+..++|.+. .+..++.
T Consensus 530 i--faghlsDV~cv~FHPNs~Y----~a-TGSs------------D~tVRlWDv~------------------~G~~VRi 572 (707)
T KOG0263|consen 530 I--FAGHLSDVDCVSFHPNSNY----VA-TGSS------------DRTVRLWDVS------------------TGNSVRI 572 (707)
T ss_pred h--hcccccccceEEECCcccc----cc-cCCC------------CceEEEEEcC------------------CCcEEEE
Confidence 5 34443 3455889999885 44 3311 1223455443 5667777
Q ss_pred cCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCC
Q 005093 256 LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSI 335 (715)
Q Consensus 256 lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~ 335 (715)
.+.+.+.+...+|||+|++|+-.+... .|.++|+.++..... +.|+ ...+
T Consensus 573 F~GH~~~V~al~~Sp~Gr~LaSg~ed~-----------~I~iWDl~~~~~v~~------------------l~~H-t~ti 622 (707)
T KOG0263|consen 573 FTGHKGPVTALAFSPCGRYLASGDEDG-----------LIKIWDLANGSLVKQ------------------LKGH-TGTI 622 (707)
T ss_pred ecCCCCceEEEEEcCCCceEeecccCC-----------cEEEEEcCCCcchhh------------------hhcc-cCce
Confidence 788888999999999999998666542 488899988654211 1111 2356
Q ss_pred CCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 336 LSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 336 ~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
..+.|+.||. ++++...+...+|| |+
T Consensus 623 ~SlsFS~dg~-vLasgg~DnsV~lW--D~ 648 (707)
T KOG0263|consen 623 YSLSFSRDGN-VLASGGADNSVRLW--DL 648 (707)
T ss_pred eEEEEecCCC-EEEecCCCCeEEEE--Ec
Confidence 7888999998 55555444455566 54
No 249
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=98.12 E-value=0.0002 Score=68.36 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=122.8
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
....+||+-|.+||.--.++ .--+|.+..-+..+-+...... +.++.||+||++|+-.+.+-.. .+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG--~vvI~D~~T~~iar~lsaH~~p----------i~sl~WS~dgr~LltsS~D~si--~l 91 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANG--RVVIYDFDTFRIARMLSAHVRP----------ITSLCWSRDGRKLLTSSRDWSI--KL 91 (405)
T ss_pred cceEEeccCcceeeeeccCC--cEEEEEccccchhhhhhccccc----------eeEEEecCCCCEeeeecCCcee--EE
Confidence 56789999999999876653 3334433333322222222222 3799999999999887655322 12
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcc-cCCcCcccCCccCceEEEEEccCCceEeec-----------CCCCC--CccceEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDW-EEDWGETYAGKRQPSLFVININSGEVQAVK-----------GIPKS--LSVGQVV 190 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-----------~~~~~--~~~~~~~ 190 (715)
|.+-... ...+++| .|=|+..+...+++...+--.+. .+..+. ..+++ .......
T Consensus 92 wDl~~gs----------~l~rirf~spv~~~q~hp~k~n~~va~~~~~-sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~ 160 (405)
T KOG1273|consen 92 WDLLKGS----------PLKRIRFDSPVWGAQWHPRKRNKCVATIMEE-SPVVIDFSDPKHSVLPKDDDGDLNSSASHGV 160 (405)
T ss_pred EeccCCC----------ceeEEEccCccceeeeccccCCeEEEEEecC-CcEEEEecCCceeeccCCCcccccccccccc
Confidence 2221111 1112222 23344444433333333333322 222221 00111 1112223
Q ss_pred EecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce---ecCCCCcccccee
Q 005093 191 WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NLTESISSAFFPR 267 (715)
Q Consensus 191 ~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~lt~~~~~~~~~~ 267 (715)
|.+.|+. ++++. ..+.|.+++. .+.+.. +++. -..+.+..
T Consensus 161 fdr~g~y-----IitGt--------------sKGkllv~~a-----------------~t~e~vas~rits-~~~IK~I~ 203 (405)
T KOG1273|consen 161 FDRRGKY-----IITGT--------------SKGKLLVYDA-----------------ETLECVASFRITS-VQAIKQII 203 (405)
T ss_pred ccCCCCE-----EEEec--------------CcceEEEEec-----------------chheeeeeeeech-heeeeEEE
Confidence 6666663 34442 2235666665 333321 2222 23577888
Q ss_pred EcCCCCeEEEEecCCCCCCCCccccceeEeeecCC----CCCCCcc--cceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 268 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT----NGNFSSL--EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 268 ~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~----~~~~~lt--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
+|-.|+.|++.+.++- |.++++.. +....++ ...-++++- ..-...+|+
T Consensus 204 ~s~~g~~liiNtsDRv-----------IR~ye~~di~~~~r~~e~e~~~K~qDvVNk--------------~~Wk~ccfs 258 (405)
T KOG1273|consen 204 VSRKGRFLIINTSDRV-----------IRTYEISDIDDEGRDGEVEPEHKLQDVVNK--------------LQWKKCCFS 258 (405)
T ss_pred EeccCcEEEEecCCce-----------EEEEehhhhcccCccCCcChhHHHHHHHhh--------------hhhhheeec
Confidence 9999999988776642 34444321 1111111 000011110 012467789
Q ss_pred cCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES 377 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~ 377 (715)
.||.+++..+ .....||.+....|...++..+..
T Consensus 259 ~dgeYv~a~s--~~aHaLYIWE~~~GsLVKILhG~k 292 (405)
T KOG1273|consen 259 GDGEYVCAGS--ARAHALYIWEKSIGSLVKILHGTK 292 (405)
T ss_pred CCccEEEecc--ccceeEEEEecCCcceeeeecCCc
Confidence 9999777666 334579999988999998877654
No 250
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.12 E-value=0.0013 Score=64.63 Aligned_cols=250 Identities=15% Similarity=0.139 Sum_probs=134.9
Q ss_pred ccceEEeeCC-CCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
++.-..+.+| ++..+||.++.+ ...+.++ .+|+..+....+.+.| + +..-.|||||++|+- ++....
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG---~~~~v~D~~~g~~~~~~~a~~gRH--F-----yGHg~fs~dG~~Lyt-TEnd~~ 73 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPG---TFALVFDCRTGQLLQRLWAPPGRH--F-----YGHGVFSPDGRLLYT-TENDYE 73 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCC---cEEEEEEcCCCceeeEEcCCCCCE--E-----ecCEEEcCCCCEEEE-eccccC
Confidence 3456678899 555555555543 2344455 6666665555444443 1 147789999997754 443211
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~~~ 199 (715)
.++..|-|||... ..+++. -....+...++.|.|||+.
T Consensus 74 --------------------------------------~g~G~IgVyd~~~-~~~ri~E~~s~GIGPHel~l~pDG~t-- 112 (305)
T PF07433_consen 74 --------------------------------------TGRGVIGVYDAAR-GYRRIGEFPSHGIGPHELLLMPDGET-- 112 (305)
T ss_pred --------------------------------------CCcEEEEEEECcC-CcEEEeEecCCCcChhhEEEcCCCCE--
Confidence 1357899999983 333331 1344566778999999998
Q ss_pred cEEEEEeec---C---ccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-ee--cCC--CCccccceeE
Q 005093 200 QYLVFVGWS---S---ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VN--LTE--SISSAFFPRF 268 (715)
Q Consensus 200 ~~i~~~~~~---~---~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--lt~--~~~~~~~~~~ 268 (715)
|+...-- . +..++... .=+..|..+|. .+|+. .+ |.. ..-+++..++
T Consensus 113 --LvVANGGI~Thpd~GR~kLNl~---tM~psL~~ld~-----------------~sG~ll~q~~Lp~~~~~lSiRHLa~ 170 (305)
T PF07433_consen 113 --LVVANGGIETHPDSGRAKLNLD---TMQPSLVYLDA-----------------RSGALLEQVELPPDLHQLSIRHLAV 170 (305)
T ss_pred --EEEEcCCCccCcccCceecChh---hcCCceEEEec-----------------CCCceeeeeecCccccccceeeEEe
Confidence 7764210 0 11111111 11235777875 56653 33 422 3346899999
Q ss_pred cCCCCeEEEEecCCCCCCCCccccce-eEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEE
Q 005093 269 SPDGKFLVFLSAKSSVDSGAHSATDS-LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 347 (715)
Q Consensus 269 spdg~~l~~~~~~~~~~~g~~~~~~~-l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l 347 (715)
++||. ++|...-. |......- |.+.+ .++...+.....+. + ..+. .-..+++++++|..+
T Consensus 171 ~~~G~-V~~a~Q~q----g~~~~~~PLva~~~--~g~~~~~~~~p~~~---~-----~~l~----~Y~gSIa~~~~g~~i 231 (305)
T PF07433_consen 171 DGDGT-VAFAMQYQ----GDPGDAPPLVALHR--RGGALRLLPAPEEQ---W-----RRLN----GYIGSIAADRDGRLI 231 (305)
T ss_pred cCCCc-EEEEEecC----CCCCccCCeEEEEc--CCCcceeccCChHH---H-----HhhC----CceEEEEEeCCCCEE
Confidence 99997 54554432 21111112 33332 22322221111000 0 0111 123577789999988
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCE
Q 005093 348 LLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDN 390 (715)
Q Consensus 348 ~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~ 390 (715)
.+++-.++...+ +|.++|+......-.. ...+++.++.
T Consensus 232 a~tsPrGg~~~~--~d~~tg~~~~~~~l~D---~cGva~~~~~ 269 (305)
T PF07433_consen 232 AVTSPRGGRVAV--WDAATGRLLGSVPLPD---ACGVAPTDDG 269 (305)
T ss_pred EEECCCCCEEEE--EECCCCCEeeccccCc---eeeeeecCCc
Confidence 887776664444 4888999887665432 3455554444
No 251
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.10 E-value=0.0011 Score=68.13 Aligned_cols=262 Identities=13% Similarity=0.171 Sum_probs=139.0
Q ss_pred cceEEeeCCCCceEEEEecCC------CCCCeEEEEe--cCCccEEEEecCccc-cccccCCCcccceeecCCCCeEEEE
Q 005093 44 GASAVVPSPSGSKLLVVRNPE------NESPIQFELW--SQSQLEKEFHVPQTV-HGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
++....+||..++|+--+... +...+...|| .+|...+.+.+..+. ..+ .-++||-|++++|-+
T Consensus 251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~W-------P~frWS~DdKy~Arm 323 (698)
T KOG2314|consen 251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKW-------PIFRWSHDDKYFARM 323 (698)
T ss_pred CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCcccc-------ceEEeccCCceeEEe
Confidence 456666677777665433211 1223455566 566666655442111 011 368999999998886
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecC
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spd 194 (715)
.... +..-..+..+++|.++= .+ ..+.+++|||-
T Consensus 324 ~~~s-------------------------------------isIyEtpsf~lld~Ksl---ki------~gIr~FswsP~ 357 (698)
T KOG2314|consen 324 TGNS-------------------------------------ISIYETPSFMLLDKKSL---KI------SGIRDFSWSPT 357 (698)
T ss_pred ccce-------------------------------------EEEEecCceeeeccccc---CC------ccccCcccCCC
Confidence 4311 00001133444443221 12 24678999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCe
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 274 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~ 274 (715)
+.- |+|=+-... +-+..+-++.++ ...+++..--........-|-..|++
T Consensus 358 ~~l----lAYwtpe~~----------~~parvtL~evP----------------s~~~iRt~nlfnVsDckLhWQk~gdy 407 (698)
T KOG2314|consen 358 SNL----LAYWTPETN----------NIPARVTLMEVP----------------SKREIRTKNLFNVSDCKLHWQKSGDY 407 (698)
T ss_pred cce----EEEEccccc----------CCcceEEEEecC----------------ccceeeeccceeeeccEEEeccCCcE
Confidence 998 888653221 233355556652 22222222112334667889999999
Q ss_pred EEEEecCCCCCC-CCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 275 LVFLSAKSSVDS-GAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 275 l~~~~~~~~~~~-g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
|.|--.+.+-.. +......+|++++-.. . .+ +++++- ..+-.++|-|.|+.+.+.+..
T Consensus 408 LcvkvdR~tK~~~~g~f~n~eIfrireKd--I-pv-----e~velk-------------e~vi~FaWEP~gdkF~vi~g~ 466 (698)
T KOG2314|consen 408 LCVKVDRHTKSKVKGQFSNLEIFRIREKD--I-PV-----EVVELK-------------ESVIAFAWEPHGDKFAVISGN 466 (698)
T ss_pred EEEEEEeeccccccceEeeEEEEEeeccC--C-Cc-----eeeecc-------------hheeeeeeccCCCeEEEEEcc
Confidence 998876643210 1111223456554221 1 11 111110 134577899999987776664
Q ss_pred CC--eeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 354 GS--SQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 354 ~~--~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.. +.+.|.+....++...+..-+ .......|||.|+.++...-.. +-..++.+|.+
T Consensus 467 ~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s-~~g~l~F~D~~ 525 (698)
T KOG2314|consen 467 TVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVS-RRGDLEFYDTD 525 (698)
T ss_pred ccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecc-cccceEEEecc
Confidence 43 446777775445544332211 1223468899999887766444 45567777754
No 252
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=98.09 E-value=6.5e-05 Score=75.65 Aligned_cols=232 Identities=14% Similarity=0.148 Sum_probs=128.2
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcccccccc
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVY 94 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 94 (715)
.++++++-+.+.-.++ |-.+...+....||++|..+.-.+-+ ....+| .+|+....+.+..-.
T Consensus 238 ~vklW~vy~~~~~lrt-----f~gH~k~Vrd~~~s~~g~~fLS~sfD-----~~lKlwDtETG~~~~~f~~~~~~----- 302 (503)
T KOG0282|consen 238 LVKLWNVYDDRRCLRT-----FKGHRKPVRDASFNNCGTSFLSASFD-----RFLKLWDTETGQVLSRFHLDKVP----- 302 (503)
T ss_pred eEEEEEEecCcceehh-----hhcchhhhhhhhccccCCeeeeeecc-----eeeeeeccccceEEEEEecCCCc-----
Confidence 3444446555542222 22233568899999999998765443 356677 466665555554444
Q ss_pred CCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce
Q 005093 95 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV 174 (715)
Q Consensus 95 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~ 174 (715)
..+.+.||+.+++++.. ....|..||..+|++
T Consensus 303 -----~cvkf~pd~~n~fl~G~-------------------------------------------sd~ki~~wDiRs~kv 334 (503)
T KOG0282|consen 303 -----TCVKFHPDNQNIFLVGG-------------------------------------------SDKKIRQWDIRSGKV 334 (503)
T ss_pred -----eeeecCCCCCcEEEEec-------------------------------------------CCCcEEEEeccchHH
Confidence 78999999988877632 225688888888875
Q ss_pred EeecCCCCCC-ccceEEEecCCCCCccEEEEEeecCccc----------------------------eeeeeeeecCCce
Q 005093 175 QAVKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETR----------------------------KLGIKYCYNRPCA 225 (715)
Q Consensus 175 ~~l~~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~----------------------------~~g~~~~~~~~~~ 225 (715)
.+- -...+ .+....|-|+|++ .+.++....-+ ..+|..+.+-.+.
T Consensus 335 vqe--Yd~hLg~i~~i~F~~~g~r----FissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~ 408 (503)
T KOG0282|consen 335 VQE--YDRHLGAILDITFVDEGRR----FISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNY 408 (503)
T ss_pred HHH--HHhhhhheeeeEEccCCce----EeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCce
Confidence 443 11111 3456677777777 66554322100 0112222223334
Q ss_pred EEEEecccccchhhhhhhhccCCCCCCceecCC--CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC
Q 005093 226 LYAVRVSLYKSEASELELKESSSEDLPVVNLTE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 303 (715)
Q Consensus 226 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~--~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 303 (715)
|+.+.+ ...+++ ...++... -.+......|||||++|+..+.+ ..++.+|+.+-
T Consensus 409 i~ifs~----~~~~r~---------nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsd-----------G~v~~wdwkt~ 464 (503)
T KOG0282|consen 409 IAIFST----VPPFRL---------NKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSD-----------GKVNFWDWKTT 464 (503)
T ss_pred EEEEec----cccccc---------CHhhhhcceeccCceeeEEEcCCCCeEEeecCC-----------ccEEEeechhh
Confidence 444432 011111 11111111 13456778999999999766554 24899999875
Q ss_pred CCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 304 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 304 ~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
+....-.. +......+.|.|-....+++..+.|...+|
T Consensus 465 kl~~~lka-------------------h~~~ci~v~wHP~e~Skvat~~w~G~Ikiw 502 (503)
T KOG0282|consen 465 KLVSKLKA-------------------HDQPCIGVDWHPVEPSKVATCGWDGLIKIW 502 (503)
T ss_pred hhhhcccc-------------------CCcceEEEEecCCCcceeEecccCceeEec
Confidence 43211110 111223556888777777777777765554
No 253
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.08 E-value=0.0035 Score=63.02 Aligned_cols=190 Identities=18% Similarity=0.156 Sum_probs=101.8
Q ss_pred eEEEEEccCCce-EeecCCCC---CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 163 SLFVININSGEV-QAVKGIPK---SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 163 ~l~~~~~~~g~~-~~l~~~~~---~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
.+++++++++.. +.+..... .....+....|||+ |+|..-.... .+... ......||++|.
T Consensus 86 g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~-----~wfgt~~~~~--~~~~~-~~~~G~lyr~~p------- 150 (307)
T COG3386 86 GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGR-----IWFGDMGYFD--LGKSE-ERPTGSLYRVDP------- 150 (307)
T ss_pred ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCC-----EEEeCCCccc--cCccc-cCCcceEEEEcC-------
Confidence 356666665555 44421111 12345678899998 7776543100 11110 112236999994
Q ss_pred hhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 239 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
.++..+.+.........++|||||+.|+++.... ..|++++++.... .+... ...
T Consensus 151 ----------~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~----------~~i~r~~~d~~~g-~~~~~----~~~ 205 (307)
T COG3386 151 ----------DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPA----------NRIHRYDLDPATG-PIGGR----RGF 205 (307)
T ss_pred ----------CCCEEEeecCcEEecCceEECCCCCEEEEEeCCC----------CeEEEEecCcccC-ccCCc----ceE
Confidence 4455555555466678899999999888887653 4688888764110 11100 011
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEE-eecCCEEEEEEeC
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLL-TLDGDNIIAVSSS 397 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~-s~~~~~l~~~~~~ 397 (715)
..... .+| ....++-..+|. |+.....+ ...+.+++++......+..+....+...| .++.+.|++++..
T Consensus 206 ~~~~~---~~G----~PDG~~vDadG~-lw~~a~~~-g~~v~~~~pdG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~ 276 (307)
T COG3386 206 VDFDE---EPG----LPDGMAVDADGN-LWVAAVWG-GGRVVRFNPDGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSAR 276 (307)
T ss_pred EEccC---CCC----CCCceEEeCCCC-EEEecccC-CceEEEECCCCcEEEEEECCCCCCccceEeCCCcCEEEEEecC
Confidence 11111 111 234555666776 44433333 35788889884445555444232233333 2456788888877
Q ss_pred CCCC
Q 005093 398 PVDV 401 (715)
Q Consensus 398 ~~~p 401 (715)
...+
T Consensus 277 ~~~~ 280 (307)
T COG3386 277 SGMS 280 (307)
T ss_pred CCCC
Confidence 7665
No 254
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=98.08 E-value=0.00096 Score=62.59 Aligned_cols=151 Identities=16% Similarity=0.218 Sum_probs=86.1
Q ss_pred cccceEEeeCCC-CceEEEEecCCCCCCeEEEEe-cC-CccE-EEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 42 MTGASAVVPSPS-GSKLLVVRNPENESPIQFELW-SQ-SQLE-KEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 42 ~~~~~~~~~Spd-g~~la~~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
.+++...+|+|- |..||--.. ..-..+| .. +..- -.+.+..+....| ..++|||.|++|+-.+.+
T Consensus 14 ~~r~W~~awhp~~g~ilAscg~-----Dk~vriw~~~~~~s~~ck~vld~~hkrsV------RsvAwsp~g~~La~aSFD 82 (312)
T KOG0645|consen 14 KDRVWSVAWHPGKGVILASCGT-----DKAVRIWSTSSGDSWTCKTVLDDGHKRSV------RSVAWSPHGRYLASASFD 82 (312)
T ss_pred CCcEEEEEeccCCceEEEeecC-----CceEEEEecCCCCcEEEEEeccccchhee------eeeeecCCCcEEEEeecc
Confidence 377899999998 775553322 2345566 33 2222 2222222222223 799999999988887654
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC-CCCccceEEEecCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNE 196 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~~~~~~~~~~spdg~ 196 (715)
. .+.+|--..++..-+.... .+..+-.++||++|+
T Consensus 83 ~--------------------------------------------t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~ 118 (312)
T KOG0645|consen 83 A--------------------------------------------TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGN 118 (312)
T ss_pred c--------------------------------------------eEEEeecCCCceeEEeeeeccccceeEEEEcCCCC
Confidence 3 2223322233333221011 123466789999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce---ecCCCCccccceeEcCCCC
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NLTESISSAFFPRFSPDGK 273 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~lt~~~~~~~~~~~spdg~ 273 (715)
. |+..+ |.-.+|...++ ++.+.. .|+++...+....|.|.-.
T Consensus 119 ~----LATCS---------------RDKSVWiWe~d----------------eddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 119 Y----LATCS---------------RDKSVWIWEID----------------EDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred E----EEEee---------------CCCeEEEEEec----------------CCCcEEEEeeeccccccccEEEEcCCcc
Confidence 8 88876 22345555541 455544 3455555678889999766
Q ss_pred eEEEEecCC
Q 005093 274 FLVFLSAKS 282 (715)
Q Consensus 274 ~l~~~~~~~ 282 (715)
-|+-.+.++
T Consensus 164 lL~S~SYDn 172 (312)
T KOG0645|consen 164 LLFSCSYDN 172 (312)
T ss_pred eeEEeccCC
Confidence 666555554
No 255
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=98.08 E-value=0.0019 Score=60.53 Aligned_cols=176 Identities=13% Similarity=0.126 Sum_probs=109.7
Q ss_pred cCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
..+.+.+||+++|+.... ...+..+....|+++|.. ++++... ..| ..+.|..+|+..
T Consensus 72 AD~t~kLWDv~tGk~la~--~k~~~~Vk~~~F~~~gn~----~l~~tD~----~mg------~~~~v~~fdi~~------ 129 (327)
T KOG0643|consen 72 ADQTAKLWDVETGKQLAT--WKTNSPVKRVDFSFGGNL----ILASTDK----QMG------YTCFVSVFDIRD------ 129 (327)
T ss_pred ccceeEEEEcCCCcEEEE--eecCCeeEEEeeccCCcE----EEEEehh----hcC------cceEEEEEEccC------
Confidence 347799999999998776 566667888999999998 8888732 222 334677777610
Q ss_pred hhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 240 ELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 240 ~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
.+....+.+ ...+..++..+....|+|-|+.|+..-.+. .|-.+|+.++....-+..
T Consensus 130 ----~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G-----------~is~~da~~g~~~v~s~~------- 187 (327)
T KOG0643|consen 130 ----DSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDG-----------SISIYDARTGKELVDSDE------- 187 (327)
T ss_pred ----ChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCC-----------cEEEEEcccCceeeechh-------
Confidence 000112333 556666677788899999999887554442 377788877543111100
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEE
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~ 393 (715)
.+...+.++++++|.. .+++++.+....|+ |..+-++.+.......+.-..++|--+.+++
T Consensus 188 -----------~h~~~Ind~q~s~d~T-~FiT~s~Dttakl~--D~~tl~v~Kty~te~PvN~aaisP~~d~Vil 248 (327)
T KOG0643|consen 188 -----------EHSSKINDLQFSRDRT-YFITGSKDTTAKLV--DVRTLEVLKTYTTERPVNTAAISPLLDHVIL 248 (327)
T ss_pred -----------hhccccccccccCCcc-eEEecccCccceee--eccceeeEEEeeecccccceecccccceEEe
Confidence 1223577889999986 66666666556665 5445555444333333344566665555554
No 256
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=98.06 E-value=0.00025 Score=67.09 Aligned_cols=261 Identities=12% Similarity=0.089 Sum_probs=138.9
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-c--CCccEEEEecCcccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-S--QSQLEKEFHVPQTVH 90 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 90 (715)
....|.++|.-+.+.... .|++. ..+..-++||+|+.+|----+ +...+|.+. . .|.....-.+.. ..
T Consensus 75 qDGklIvWDs~TtnK~ha----ipl~s--~WVMtCA~sPSg~~VAcGGLd--N~Csiy~ls~~d~~g~~~v~r~l~g-Ht 145 (343)
T KOG0286|consen 75 QDGKLIVWDSFTTNKVHA----IPLPS--SWVMTCAYSPSGNFVACGGLD--NKCSIYPLSTRDAEGNVRVSRELAG-HT 145 (343)
T ss_pred cCCeEEEEEcccccceeE----EecCc--eeEEEEEECCCCCeEEecCcC--ceeEEEecccccccccceeeeeecC-cc
Confidence 445556655655553222 35555 678999999999999865332 455677766 3 332222222222 11
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCcc-CceEEEEEc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKR-QPSLFVINI 169 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~~ 169 (715)
+.++..+|-+|+. |+-.+.+.+- ..|.+...+............-.+...|.-+.+++..+ ...-++||+
T Consensus 146 ------gylScC~f~dD~~-ilT~SGD~TC--alWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~ 216 (343)
T KOG0286|consen 146 ------GYLSCCRFLDDNH-ILTGSGDMTC--ALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDV 216 (343)
T ss_pred ------ceeEEEEEcCCCc-eEecCCCceE--EEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeec
Confidence 2337788888775 4343322111 12222222222222222222223334442234443323 356889999
Q ss_pred cCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 170 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 170 ~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
..+.-.+-- .-.+..+..+.|-|+|.. ++.-+ ++ ...-.+|+ +.
T Consensus 217 R~~~c~qtF-~ghesDINsv~ffP~G~a----fatGS--DD-------------~tcRlyDl----------------Ra 260 (343)
T KOG0286|consen 217 RSGQCVQTF-EGHESDINSVRFFPSGDA----FATGS--DD-------------ATCRLYDL----------------RA 260 (343)
T ss_pred cCcceeEee-cccccccceEEEccCCCe----eeecC--CC-------------ceeEEEee----------------cC
Confidence 877655541 223345778999999987 55433 11 13344554 24
Q ss_pred CCCceecCCC--CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-CcccceeeeeeceecCCCCC
Q 005093 250 DLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVVQCAEGDC 326 (715)
Q Consensus 250 ~~~~~~lt~~--~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~~ 326 (715)
..+......+ ...+.++.||..|+ |+|....+ ....++|.-.++.. .|..
T Consensus 261 D~~~a~ys~~~~~~gitSv~FS~SGR-lLfagy~d----------~~c~vWDtlk~e~vg~L~G---------------- 313 (343)
T KOG0286|consen 261 DQELAVYSHDSIICGITSVAFSKSGR-LLFAGYDD----------FTCNVWDTLKGERVGVLAG---------------- 313 (343)
T ss_pred CcEEeeeccCcccCCceeEEEccccc-EEEeeecC----------CceeEeeccccceEEEeec----------------
Confidence 4444444433 22588999999998 55665443 23667774333321 1111
Q ss_pred ccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 327 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 327 ~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
++..+..+.-+|||. .+.+.+++...+||
T Consensus 314 ----HeNRvScl~~s~DG~-av~TgSWDs~lriW 342 (343)
T KOG0286|consen 314 ----HENRVSCLGVSPDGM-AVATGSWDSTLRIW 342 (343)
T ss_pred ----cCCeeEEEEECCCCc-EEEecchhHheeec
Confidence 222455667889996 56777777666666
No 257
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=98.04 E-value=6e-05 Score=76.42 Aligned_cols=84 Identities=10% Similarity=0.030 Sum_probs=50.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEec--Ccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV--PQTVHGS 92 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 92 (715)
+.++|+.|+....++..+||+ -.|.|+.+....+...+ ++-.+|.+.+.....+++-. ..+..-
T Consensus 253 KGDQYI~Dm~nTKGHia~lt~------------g~whP~~k~~FlT~s~D-gtlRiWdv~~~k~q~qVik~k~~~g~Rv- 318 (641)
T KOG0772|consen 253 KGDQYIRDMYNTKGHIAELTC------------GCWHPDNKEEFLTCSYD-GTLRIWDVNNTKSQLQVIKTKPAGGKRV- 318 (641)
T ss_pred ccchhhhhhhccCCceeeeec------------cccccCcccceEEecCC-CcEEEEecCCchhheeEEeeccCCCccc-
Confidence 345555556555555554444 36888988876665554 66677777655555555432 222221
Q ss_pred ccCCCcccceeecCCCCeEEEEeec
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
......|+|||+.||-.+.+
T Consensus 319 -----~~tsC~~nrdg~~iAagc~D 338 (641)
T KOG0772|consen 319 -----PVTSCAWNRDGKLIAAGCLD 338 (641)
T ss_pred -----CceeeecCCCcchhhhcccC
Confidence 22688999999998775543
No 258
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=98.04 E-value=8e-05 Score=73.44 Aligned_cols=236 Identities=15% Similarity=0.171 Sum_probs=137.1
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
+....|+|+|++|.-.+..+ -|.+|.+..-. +..-...| |..++.+.||++|.+++-.. ...-.++
T Consensus 99 V~~v~WtPeGRRLltgs~SG-----EFtLWNg~~fn--FEtilQaH-----Ds~Vr~m~ws~~g~wmiSgD--~gG~iKy 164 (464)
T KOG0284|consen 99 VNVVRWTPEGRRLLTGSQSG-----EFTLWNGTSFN--FETILQAH-----DSPVRTMKWSHNGTWMISGD--KGGMIKY 164 (464)
T ss_pred eeeEEEcCCCceeEeecccc-----cEEEecCceee--HHHHhhhh-----cccceeEEEccCCCEEEEcC--CCceEEe
Confidence 67789999999998765543 48888651111 11101112 12348999999999876532 2222334
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce-EeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~-~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
|...+..-.........-+..++|.|+...=+.-...+.|.+||..-.+. ++| ......+..+.|.|.-. ++
T Consensus 165 WqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL--~GHgwdVksvdWHP~kg-----Li 237 (464)
T KOG0284|consen 165 WQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVL--RGHGWDVKSVDWHPTKG-----LI 237 (464)
T ss_pred cccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhhee--ccCCCCcceeccCCccc-----ee
Confidence 43332222112222223344555665432222222347899999876554 455 44455788899999644 66
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
+++. .++-+-.+|. .+++ .-.|......+-...|+|+|++|+-.+.+.
T Consensus 238 asgs--------------kDnlVKlWDp-----------------rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~ 286 (464)
T KOG0284|consen 238 ASGS--------------KDNLVKLWDP-----------------RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQ 286 (464)
T ss_pred EEcc--------------CCceeEeecC-----------------CCcchhhhhhhccceEEEEEEcCCCCeeEEccCCc
Confidence 6652 2223445674 4444 445667777899999999999998777653
Q ss_pred CCCCCCccccceeEeeecCCCC-CCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 283 SVDSGAHSATDSLHRIDWPTNG-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
.+-++|+.+-+ .+..-. +...+....|+|=...|+.+...++....|.
T Consensus 287 -----------~~kv~DiR~mkEl~~~r~--------------------Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~ 335 (464)
T KOG0284|consen 287 -----------SCKVFDIRTMKELFTYRG--------------------HKKDVTSLTWHPLNESLFTSGGSDGSVVHWV 335 (464)
T ss_pred -----------eEEEEehhHhHHHHHhhc--------------------chhhheeeccccccccceeeccCCCceEEEe
Confidence 36677776322 111111 1113456779987777877776666556666
Q ss_pred EE
Q 005093 362 VN 363 (715)
Q Consensus 362 ~d 363 (715)
++
T Consensus 336 v~ 337 (464)
T KOG0284|consen 336 VG 337 (464)
T ss_pred cc
Confidence 55
No 259
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=98.03 E-value=0.0003 Score=76.53 Aligned_cols=154 Identities=15% Similarity=0.176 Sum_probs=97.5
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEe-cCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.+...++|-+|+++|+.++.. .+-++. .++..+..+. .... +..++++|.|+.||.++-+
T Consensus 98 p~r~~~v~g~g~~iaagsdD~----~vK~~~~~D~s~~~~lrgh~ap----------Vl~l~~~p~~~fLAvss~d---- 159 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDT----AVKLLNLDDSSQEKVLRGHDAP----------VLQLSYDPKGNFLAVSSCD---- 159 (933)
T ss_pred cceEEEEecCCcEEEeecCce----eEEEEeccccchheeecccCCc----------eeeeeEcCCCCEEEEEecC----
Confidence 357789999999999876543 344444 3333333332 2222 3799999999999987432
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCCC------CCccceEEEecC
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPK------SLSVGQVVWAPL 194 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~------~~~~~~~~~spd 194 (715)
.+|++|+++++.... +++... ......++|+|+
T Consensus 160 ----------------------------------------G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk 199 (933)
T KOG1274|consen 160 ----------------------------------------GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPK 199 (933)
T ss_pred ----------------------------------------ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCC
Confidence 669999998876432 221111 224568899999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCC-C-ccccceeEcCC
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-I-SSAFFPRFSPD 271 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~-~-~~~~~~~~spd 271 (715)
|.. +++... ...|-.++. .+.+.. .|... . .......|||.
T Consensus 200 ~g~----la~~~~---------------d~~Vkvy~r-----------------~~we~~f~Lr~~~~ss~~~~~~wsPn 243 (933)
T KOG1274|consen 200 GGT----LAVPPV---------------DNTVKVYSR-----------------KGWELQFKLRDKLSSSKFSDLQWSPN 243 (933)
T ss_pred CCe----EEeecc---------------CCeEEEEcc-----------------CCceeheeecccccccceEEEEEcCC
Confidence 888 777652 124555553 333332 22211 1 12677999999
Q ss_pred CCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 272 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 272 g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
|++||-...+. +|.++|+++
T Consensus 244 G~YiAAs~~~g-----------~I~vWnv~t 263 (933)
T KOG1274|consen 244 GKYIAASTLDG-----------QILVWNVDT 263 (933)
T ss_pred CcEEeeeccCC-----------cEEEEeccc
Confidence 99998655542 588888886
No 260
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.03 E-value=6.9e-05 Score=77.94 Aligned_cols=169 Identities=15% Similarity=0.183 Sum_probs=101.3
Q ss_pred CCCcEEEEEcCCCCCC-CCccchHHHHHHHhCC--cEEEEEcCCCC-CCCchhhhhcCCCCCCccchhhHHHHHHHHHH-
Q 005093 479 SCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVG--YSLLIVNYRGS-LGFGEEALQSLPGKVGSQDVNDVLTAIDHVID- 553 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~-~~~~~~~~~~~la~~G--~~vi~~d~rG~-~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~- 553 (715)
.-.|+++++||++... ....+..+...|.-.| ..|..+|++.. +|- +. ....+-++.+.++...
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~----------nI-~h~ae~~vSf~r~kvle 242 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGA----------NI-KHAAEYSVSFDRYKVLE 242 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCc----------ch-HHHHHHHHHHhhhhhhh
Confidence 3468899999987222 2222223334444344 44566776631 110 00 0113334444443322
Q ss_pred -cCCCCCceEEEEEeChhHHHHHHHHhhCCCc-eeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhh
Q 005093 554 -MGLANPSKVTVVGGSHGGFLTTHLIGQAPDK-FVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED 631 (715)
Q Consensus 554 -~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (715)
.+......|.|+|.|||+.++.+....+.+. +.++|++.=..+.. + +. + +..
T Consensus 243 i~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~v------d----------gp---r---gir---- 296 (784)
T KOG3253|consen 243 ITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTV------D----------GP---R---GIR---- 296 (784)
T ss_pred hhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCC------C----------cc---c---CCc----
Confidence 2345678899999999988887776655443 56666553222100 0 00 0 001
Q ss_pred HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC
Q 005093 632 LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 696 (715)
Q Consensus 632 ~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 696 (715)
-..+..++.|+|++.|.+|..|++...+++.++++. +++++++.+++|.+.-+
T Consensus 297 ---------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 297 ---------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIP 349 (784)
T ss_pred ---------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCC
Confidence 012334678999999999999999998888888875 68899999999988643
No 261
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=98.03 E-value=0.00038 Score=70.07 Aligned_cols=145 Identities=12% Similarity=0.112 Sum_probs=87.3
Q ss_pred cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCc--------CcccCC-ccCceEEEEE
Q 005093 98 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW--------GETYAG-KRQPSLFVIN 168 (715)
Q Consensus 98 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~-~~~~~l~~~~ 168 (715)
.+..+.|.|.|.-|+-.+++.+.+ .|.+...............+....|.|.. +..+.. .....|.+||
T Consensus 361 ~V~alk~n~tg~LLaS~SdD~Tlk--iWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd 438 (524)
T KOG0273|consen 361 EVNALKWNPTGSLLASCSDDGTLK--IWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD 438 (524)
T ss_pred ceEEEEECCCCceEEEecCCCeeE--eeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence 447889999999888877766543 33333222222222222222222333321 222221 1236788999
Q ss_pred ccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCC
Q 005093 169 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 248 (715)
Q Consensus 169 ~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (715)
++.|.+.-.- ......+.+++|||||++ +++-. +..-|...+.
T Consensus 439 v~~gv~i~~f-~kH~~pVysvafS~~g~y----lAsGs---------------~dg~V~iws~----------------- 481 (524)
T KOG0273|consen 439 VESGVPIHTL-MKHQEPVYSVAFSPNGRY----LASGS---------------LDGCVHIWST----------------- 481 (524)
T ss_pred ccCCceeEee-ccCCCceEEEEecCCCcE----EEecC---------------CCCeeEeccc-----------------
Confidence 9988765431 345557889999999998 88754 2224555554
Q ss_pred CCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 249 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 249 ~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
++++..+-....+.+..+.|+.+|.+|.-...+
T Consensus 482 ~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 482 KTGKLVKSYQGTGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred cchheeEeecCCCeEEEEEEcCCCCEEEEEecC
Confidence 555555544556668999999999988655444
No 262
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=98.00 E-value=0.00031 Score=69.43 Aligned_cols=133 Identities=15% Similarity=0.230 Sum_probs=79.9
Q ss_pred ceEEEEEEEeecCCCCccccc-cCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCC--------------c
Q 005093 14 RKKFMLSTVISKENENSVTFQ-WAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS--------------Q 78 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~--------------~ 78 (715)
.+..||.+..+..+.....+. -+.+..+...+....|||+|..||-..+. + ...+|..+ +
T Consensus 36 ~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~--g---~v~lWk~~~~~~~~~d~e~~~~k 110 (434)
T KOG1009|consen 36 KDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDG--G---EVFLWKQGDVRIFDADTEADLNK 110 (434)
T ss_pred cceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCC--c---eEEEEEecCcCCccccchhhhCc
Confidence 456788755544433211111 12355555778999999999999855333 2 33455222 1
Q ss_pred cEEEEec-CccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccC
Q 005093 79 LEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYA 157 (715)
Q Consensus 79 ~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 157 (715)
..+++.- -.+....+ ..+.|+||+..+.+.+-
T Consensus 111 e~w~v~k~lr~h~~di------ydL~Ws~d~~~l~s~s~----------------------------------------- 143 (434)
T KOG1009|consen 111 EKWVVKKVLRGHRDDI------YDLAWSPDSNFLVSGSV----------------------------------------- 143 (434)
T ss_pred cceEEEEEecccccch------hhhhccCCCceeeeeec-----------------------------------------
Confidence 1111110 11111222 58999999998887532
Q ss_pred CccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEe
Q 005093 158 GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 158 ~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
.+.+++||+..|.+..+- ......+..++|.|-++. |+-.+
T Consensus 144 ---dns~~l~Dv~~G~l~~~~-~dh~~yvqgvawDpl~qy----v~s~s 184 (434)
T KOG1009|consen 144 ---DNSVRLWDVHAGQLLAIL-DDHEHYVQGVAWDPLNQY----VASKS 184 (434)
T ss_pred ---cceEEEEEeccceeEeec-cccccccceeecchhhhh----hhhhc
Confidence 277999999999887762 344557788999998887 76544
No 263
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=97.98 E-value=0.00069 Score=69.89 Aligned_cols=156 Identities=15% Similarity=0.132 Sum_probs=91.4
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCcccc
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAF 264 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~ 264 (715)
.--++.|.+-|.. |+..+..+- ++.+..| .+.+.||.++. ++.....--...+.+.
T Consensus 219 dkvqm~WN~~gt~----LLvLastdV-Dktn~SY--YGEq~Lyll~t-----------------~g~s~~V~L~k~GPVh 274 (566)
T KOG2315|consen 219 DKVQMKWNKLGTA----LLVLASTDV-DKTNASY--YGEQTLYLLAT-----------------QGESVSVPLLKEGPVH 274 (566)
T ss_pred ceeEEEeccCCce----EEEEEEEee-cCCCccc--cccceEEEEEe-----------------cCceEEEecCCCCCce
Confidence 3447889999998 776654332 2333332 35578999996 5333332223467889
Q ss_pred ceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCC
Q 005093 265 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 344 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg 344 (715)
+..|||+|+.++.+-.- ... .+-++|+...-...+..+ .-..+-|+|.|
T Consensus 275 dv~W~~s~~EF~VvyGf-------MPA--kvtifnlr~~~v~df~eg----------------------pRN~~~fnp~g 323 (566)
T KOG2315|consen 275 DVTWSPSGREFAVVYGF-------MPA--KVTIFNLRGKPVFDFPEG----------------------PRNTAFFNPHG 323 (566)
T ss_pred EEEECCCCCEEEEEEec-------ccc--eEEEEcCCCCEeEeCCCC----------------------CccceEECCCC
Confidence 99999999988765522 122 344556655322111111 12355699999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCEEEEEEeC
Q 005093 345 CTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 345 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~~~~~ 397 (715)
+.|++..-..-...+-.+|..+ .+.|.... .+-+...|+|||.+++....+
T Consensus 324 ~ii~lAGFGNL~G~mEvwDv~n--~K~i~~~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 324 NIILLAGFGNLPGDMEVWDVPN--RKLIAKFKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred CEEEEeecCCCCCceEEEeccc--hhhccccccCCceEEEEcCCCcEEEEEecc
Confidence 9888776544333455557655 22332221 233567899999988876533
No 264
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.98 E-value=0.00011 Score=71.51 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=87.5
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.+...+|.+||..|+-.+-.+ .-+.+| +.|+..++... +. +.++.+.|||||.+|+-.+-+.
T Consensus 197 pVtsmqwn~dgt~l~tAS~gs----ssi~iWdpdtg~~~pL~~~--gl-------gg~slLkwSPdgd~lfaAt~da--- 260 (445)
T KOG2139|consen 197 PVTSMQWNEDGTILVTASFGS----SSIMIWDPDTGQKIPLIPK--GL-------GGFSLLKWSPDGDVLFAATCDA--- 260 (445)
T ss_pred eeeEEEEcCCCCEEeecccCc----ceEEEEcCCCCCccccccc--CC-------CceeeEEEcCCCCEEEEecccc---
Confidence 378889999999887544322 335677 56666666532 22 2337899999999885543221
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEE-EEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLF-VININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~-~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...|| .-.-.+.+...+ .++ .+....|||+|+.
T Consensus 261 ---------------------------------------vfrlw~e~q~wt~erw~l--gsg--rvqtacWspcGsf--- 294 (445)
T KOG2139|consen 261 ---------------------------------------VFRLWQENQSWTKERWIL--GSG--RVQTACWSPCGSF--- 294 (445)
T ss_pred ---------------------------------------eeeeehhcccceecceec--cCC--ceeeeeecCCCCE---
Confidence 12222 111123344444 233 6778899999999
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhh-hhcc--CCCCCCceecCCC---CccccceeEcCCCCe
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE-LKES--SSEDLPVVNLTES---ISSAFFPRFSPDGKF 274 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~lt~~---~~~~~~~~~spdg~~ 274 (715)
|+|+.... ..||.+.+++++......- .++. +.+-.++...++. .+.....+|.|-|.+
T Consensus 295 -LLf~~sgs--------------p~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGey 359 (445)
T KOG2139|consen 295 -LLFACSGS--------------PRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEY 359 (445)
T ss_pred -EEEEEcCC--------------ceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCE
Confidence 99986322 2455555432211111000 0000 0111222222321 335677999999999
Q ss_pred EEEEecC
Q 005093 275 LVFLSAK 281 (715)
Q Consensus 275 l~~~~~~ 281 (715)
||..-..
T Consensus 360 Lav~fKg 366 (445)
T KOG2139|consen 360 LAVIFKG 366 (445)
T ss_pred EEEEEcC
Confidence 9866544
No 265
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.97 E-value=5.8e-05 Score=72.59 Aligned_cols=104 Identities=17% Similarity=0.300 Sum_probs=61.4
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHH--------HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHH
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFL--------SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVI 552 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~l--------a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~ 552 (715)
...|||+||..++ ...+......+ ....+.++..||..... . ..+..-....+-+.++++.+.
T Consensus 4 g~pVlFIhG~~Gs--~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s---~----~~g~~l~~q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 4 GIPVLFIHGNAGS--YKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELS---A----FHGRTLQRQAEFLAEAIKYIL 74 (225)
T ss_pred CCEEEEECcCCCC--HhHHHHHHHHHhhhhhhccCccceeEEEeccCcccc---c----cccccHHHHHHHHHHHHHHHH
Confidence 3569999995443 22333332222 23357888999865211 1 111111122445556666666
Q ss_pred HcC---CCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCC
Q 005093 553 DMG---LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNP 593 (715)
Q Consensus 553 ~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~ 593 (715)
+.. ...+++|.|+||||||.++..++...+ +.++.+|.++.
T Consensus 75 ~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 75 ELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred HhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 543 356789999999999999888776543 35777776554
No 266
>COG3150 Predicted esterase [General function prediction only]
Probab=97.97 E-value=0.0002 Score=62.24 Aligned_cols=143 Identities=17% Similarity=0.239 Sum_probs=74.5
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch-hhhhccCCCCCCceeeeccCCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LALMVGTTDIPDWCYVESYGSKG 619 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 619 (715)
...+++.++.++++. .| ..++|+|.|.||+.|.+++.++. +++++ ++|.+. ...+.+..+.+.-
T Consensus 42 p~~a~~ele~~i~~~-~~-~~p~ivGssLGGY~At~l~~~~G--irav~-~NPav~P~e~l~gylg~~en---------- 106 (191)
T COG3150 42 PQQALKELEKAVQEL-GD-ESPLIVGSSLGGYYATWLGFLCG--IRAVV-FNPAVRPYELLTGYLGRPEN---------- 106 (191)
T ss_pred HHHHHHHHHHHHHHc-CC-CCceEEeecchHHHHHHHHHHhC--Chhhh-cCCCcCchhhhhhhcCCCCC----------
Confidence 445555566555553 12 34899999999999999998864 44443 445332 1222221111110
Q ss_pred CCCCCCCCChhhHHHHHhcCchhhccCCCCc-EEEEee-CCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC
Q 005093 620 KDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFLLG-AQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 697 (715)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~Lii~G-~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 697 (715)
.+.+....-+....... ....+..++.| .|++.. +.|++....++.+.+.. +...+.+|+.|.|...+
T Consensus 107 --~ytg~~y~le~~hI~~l-~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~-------~~~~V~dgg~H~F~~f~ 176 (191)
T COG3150 107 --PYTGQEYVLESRHIATL-CVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHP-------CYEIVWDGGDHKFKGFS 176 (191)
T ss_pred --CCCcceEEeehhhHHHH-HHhhccccCCCcEEEeecccccHHHHHHHHHHHhhh-------hhheeecCCCccccchH
Confidence 00000000000111111 11233444444 444444 44988876666655554 34567888999886543
Q ss_pred chHHHHHHHHHHHH
Q 005093 698 SDFESFLNIGLWFK 711 (715)
Q Consensus 698 ~~~~~~~~i~~wl~ 711 (715)
..+.+|+.|..
T Consensus 177 ---~~l~~i~aF~g 187 (191)
T COG3150 177 ---RHLQRIKAFKG 187 (191)
T ss_pred ---HhHHHHHHHhc
Confidence 45777888764
No 267
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=97.95 E-value=0.00068 Score=73.91 Aligned_cols=154 Identities=14% Similarity=0.130 Sum_probs=91.7
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc-eEeec
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVK 178 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~-~~~l~ 178 (715)
..+.++-+|++||+.+++ ..|-+++.++.. .+.+
T Consensus 100 r~~~v~g~g~~iaagsdD--------------------------------------------~~vK~~~~~D~s~~~~l- 134 (933)
T KOG1274|consen 100 RDLAVSGSGKMIAAGSDD--------------------------------------------TAVKLLNLDDSSQEKVL- 134 (933)
T ss_pred eEEEEecCCcEEEeecCc--------------------------------------------eeEEEEeccccchheee-
Confidence 688999999999997543 446666665543 3333
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecC
Q 005093 179 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT 257 (715)
Q Consensus 179 ~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt 257 (715)
...+.++.++.|.|.|+. |+.+. -++.++.+++ +++.. ..++
T Consensus 135 -rgh~apVl~l~~~p~~~f----LAvss---------------~dG~v~iw~~-----------------~~~~~~~tl~ 177 (933)
T KOG1274|consen 135 -RGHDAPVLQLSYDPKGNF----LAVSS---------------CDGKVQIWDL-----------------QDGILSKTLT 177 (933)
T ss_pred -cccCCceeeeeEcCCCCE----EEEEe---------------cCceEEEEEc-----------------ccchhhhhcc
Confidence 233456778999999997 77665 3346778886 44433 2222
Q ss_pred CC--------CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 258 ES--------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 258 ~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
.- ...+..|+|+|+|.++++...+.. +-+++..+.+..-..... .
T Consensus 178 ~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~-----------Vkvy~r~~we~~f~Lr~~-~--------------- 230 (933)
T KOG1274|consen 178 GVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT-----------VKVYSRKGWELQFKLRDK-L--------------- 230 (933)
T ss_pred cCCccccccccceeeeeeecCCCCeEEeeccCCe-----------EEEEccCCceeheeeccc-c---------------
Confidence 21 123677999999888888877643 444554443321100000 0
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 366 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t 366 (715)
.......+.|+|.|++|..++. .+ .|..||.++
T Consensus 231 -~ss~~~~~~wsPnG~YiAAs~~-~g--~I~vWnv~t 263 (933)
T KOG1274|consen 231 -SSSKFSDLQWSPNGKYIAASTL-DG--QILVWNVDT 263 (933)
T ss_pred -cccceEEEEEcCCCcEEeeecc-CC--cEEEEeccc
Confidence 0001345679999997766554 33 444456554
No 268
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=0.00061 Score=71.37 Aligned_cols=232 Identities=16% Similarity=0.169 Sum_probs=130.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
..+....|||+|+.||.....+ .+.+|+..+...+......... .+..++|+. .++-...
T Consensus 218 ~~vtSv~ws~~G~~LavG~~~g-----~v~iwD~~~~k~~~~~~~~h~~------rvg~laW~~---~~lssGs------ 277 (484)
T KOG0305|consen 218 ELVTSVKWSPDGSHLAVGTSDG-----TVQIWDVKEQKKTRTLRGSHAS------RVGSLAWNS---SVLSSGS------ 277 (484)
T ss_pred CceEEEEECCCCCEEEEeecCC-----eEEEEehhhccccccccCCcCc------eeEEEeccC---ceEEEec------
Confidence 6689999999999999876553 4455532222222222111111 227888982 2222211
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
+...|..+|+...+...-+-......+....|++|++. +
T Consensus 278 -------------------------------------r~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~----l 316 (484)
T KOG0305|consen 278 -------------------------------------RDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQ----L 316 (484)
T ss_pred -------------------------------------CCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCe----e
Confidence 22556677765443211100222335668899999998 7
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
+--+ .++.+++.|. ........++++...+...+|+|=-+-|+-+...
T Consensus 317 ASGg---------------nDN~~~Iwd~----------------~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGG- 364 (484)
T KOG0305|consen 317 ASGG---------------NDNVVFIWDG----------------LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGG- 364 (484)
T ss_pred ccCC---------------CccceEeccC----------------CCccccEEEeccceeeeEeeeCCCccCceEEcCC-
Confidence 6544 2235666664 1455667888888889999999966655444332
Q ss_pred CCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee-CCeeEEEE
Q 005093 283 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIIS 361 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-~~~~~l~~ 361 (715)
.....|..+|..++....... ....+.++.|++..+.|+.+... .....||.
T Consensus 365 -------s~D~~i~fwn~~~g~~i~~vd--------------------tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~ 417 (484)
T KOG0305|consen 365 -------SADRCIKFWNTNTGARIDSVD--------------------TGSQVCSLIWSKKYKELLSTHGYSENQITLWK 417 (484)
T ss_pred -------CcccEEEEEEcCCCcEecccc--------------------cCCceeeEEEcCCCCEEEEecCCCCCcEEEEe
Confidence 334568888877655421110 01145688899999888765442 23345666
Q ss_pred EECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 362 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 362 ~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
+.. -..+..+.....-+-...++|||..++..+
T Consensus 418 ~ps-~~~~~~l~gH~~RVl~la~SPdg~~i~t~a 450 (484)
T KOG0305|consen 418 YPS-MKLVAELLGHTSRVLYLALSPDGETIVTGA 450 (484)
T ss_pred ccc-cceeeeecCCcceeEEEEECCCCCEEEEec
Confidence 653 122333333333233346677766665444
No 269
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.93 E-value=4.3e-05 Score=82.24 Aligned_cols=112 Identities=21% Similarity=0.193 Sum_probs=68.8
Q ss_pred CcEEEEEcCCCCCCCCc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhh--hc----CCCCCCccchhhHHHHHHHHH
Q 005093 481 DPLIVVLHGGPHSVSLS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL--QS----LPGKVGSQDVNDVLTAIDHVI 552 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~--~~----~~~~~~~~~~~d~~~~i~~l~ 552 (715)
.|++|++-| -...... ..........+.|-.|+++.+|- ||.+.. .. +..-...+.++|++..++++.
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~ 104 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRY---YGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVK 104 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TT---STTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhh---hcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHH
Confidence 888888855 2221111 11123344467899999999998 666542 11 111122345789999999988
Q ss_pred HcC-CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch
Q 005093 553 DMG-LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 596 (715)
Q Consensus 553 ~~~-~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 596 (715)
.+. ..+..+++++|.|+||.+|+++-.++|+++.++++.|+++.
T Consensus 105 ~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 105 KKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 653 34556999999999999999999999999999998887653
No 270
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.93 E-value=0.0013 Score=63.07 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=60.1
Q ss_pred CceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeee--c
Q 005093 223 PCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID--W 300 (715)
Q Consensus 223 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~--~ 300 (715)
.+.|.++++ .++....+..........+.||||+.|+...-..+ +.++. .
T Consensus 208 dt~i~lw~l-----------------kGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpD-----------VkVwE~~f 259 (420)
T KOG2096|consen 208 DTKICLWDL-----------------KGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPD-----------VKVWEPIF 259 (420)
T ss_pred CCcEEEEec-----------------CCceeeeeccccccccceeeCCCCcEEEEecCCCC-----------ceEEEEEe
Confidence 347889997 65555566555556788899999999987665532 34433 2
Q ss_pred CCCCC-CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 301 PTNGN-FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 301 ~~~~~-~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
...+. +.+. .+ ..+.| +...+..++|+++.+++ ++.+.+|..+||-.|+.
T Consensus 260 ~kdG~fqev~-------rv------f~LkG-H~saV~~~aFsn~S~r~-vtvSkDG~wriwdtdVr 310 (420)
T KOG2096|consen 260 TKDGTFQEVK-------RV------FSLKG-HQSAVLAAAFSNSSTRA-VTVSKDGKWRIWDTDVR 310 (420)
T ss_pred ccCcchhhhh-------hh------heecc-chhheeeeeeCCCccee-EEEecCCcEEEeeccce
Confidence 22222 1111 00 01111 22245677899998765 55666788888877763
No 271
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=97.93 E-value=0.0027 Score=65.65 Aligned_cols=204 Identities=16% Similarity=0.260 Sum_probs=115.6
Q ss_pred ccceEEeeCCCC--ceEEEEecCCCCCCeEEEEe---cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 43 TGASAVVPSPSG--SKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 43 ~~~~~~~~Spdg--~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
.++....+||-+ ..||+-.-..++......++ ..+....+-.-+.-..+. -.+.|.+-|+-|+.++..
T Consensus 166 ~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadk-------vqm~WN~~gt~LLvLast 238 (566)
T KOG2315|consen 166 SGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADK-------VQMKWNKLGTALLVLAST 238 (566)
T ss_pred cceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccce-------eEEEeccCCceEEEEEEE
Confidence 456777777764 45554333333555555555 223322221111111111 278899999999998754
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
..... .-.|. |+ ..||.++.++.. ..+. .....++.++.|+|+|+.
T Consensus 239 dVDkt----------------------n~SYY---GE-------q~Lyll~t~g~s-~~V~-L~k~GPVhdv~W~~s~~E 284 (566)
T KOG2315|consen 239 DVDKT----------------------NASYY---GE-------QTLYLLATQGES-VSVP-LLKEGPVHDVTWSPSGRE 284 (566)
T ss_pred eecCC----------------------Ccccc---cc-------ceEEEEEecCce-EEEe-cCCCCCceEEEECCCCCE
Confidence 32211 00011 33 889999998443 3332 456678899999999998
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
++.+-. + -+..+-.+|+ .+..+-.+-+ +.-....|||-|+.|++
T Consensus 285 ----F~VvyG--------f-----MPAkvtifnl-----------------r~~~v~df~e--gpRN~~~fnp~g~ii~l 328 (566)
T KOG2315|consen 285 ----FAVVYG--------F-----MPAKVTIFNL-----------------RGKPVFDFPE--GPRNTAFFNPHGNIILL 328 (566)
T ss_pred ----EEEEEe--------c-----ccceEEEEcC-----------------CCCEeEeCCC--CCccceEECCCCCEEEE
Confidence 665431 1 1124666675 4444433333 34456889999999998
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+.-.+ -..++-++|..+.+ .++.... ....-+.|+|||++++..+.
T Consensus 329 AGFGN--------L~G~mEvwDv~n~K--~i~~~~a-------------------~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 329 AGFGN--------LPGDMEVWDVPNRK--LIAKFKA-------------------ANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred eecCC--------CCCceEEEeccchh--hcccccc-------------------CCceEEEEcCCCcEEEEEec
Confidence 88664 12357778877632 2221110 01234569999997766554
No 272
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.91 E-value=0.00043 Score=69.99 Aligned_cols=207 Identities=12% Similarity=0.128 Sum_probs=120.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHhCCcEEEEEcCCCCCCCc-hhhh---------
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFG-EEAL--------- 529 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~~~~~~~la~~G~~vi~~d~rG~~~~g-~~~~--------- 529 (715)
++.++- .+++|.. ......+||++||-+....+. ....+...|.++|+.++.+..+.-.... ....
T Consensus 70 ~~~~fl-aL~~~~~--~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a 146 (310)
T PF12048_consen 70 GEERFL-ALWRPAN--SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSA 146 (310)
T ss_pred CCEEEE-EEEeccc--CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCC
Confidence 344444 3666753 566788999999965554433 3445667889999999998876511000 0000
Q ss_pred --hcCCCC-----------------CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC-ceeEEE
Q 005093 530 --QSLPGK-----------------VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAA 589 (715)
Q Consensus 530 --~~~~~~-----------------~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v 589 (715)
...... .......-+.+++.++.+++ ..+|+|+||+.|+++++.++...+. .+.++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 147 GDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 000000 00011223445666666664 3569999999999999999887654 478888
Q ss_pred ecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHH
Q 005093 590 ARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ 669 (715)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~ 669 (715)
++++.... ... .......+.+++.|+|=|++.....+ .....
T Consensus 224 ~I~a~~p~-------------------------------~~~-----n~~l~~~la~l~iPvLDi~~~~~~~~--~~~a~ 265 (310)
T PF12048_consen 224 LINAYWPQ-------------------------------PDR-----NPALAEQLAQLKIPVLDIYSADNPAS--QQTAK 265 (310)
T ss_pred EEeCCCCc-------------------------------chh-----hhhHHHHhhccCCCEEEEecCCChHH--HHHHH
Confidence 88774210 000 01112345678899999998773222 22222
Q ss_pred HHHHH-HHc-CCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 670 YARAL-REK-GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 670 ~~~~l-~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
..+.+ +++ ....+-+.+.+..|.....+ ....++|-.|++++
T Consensus 266 ~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~--~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 266 QRKQAAKRNKKPDYRQIQLPGLPDNPSGWQ--EQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHhccCCCceeEecCCCCCChhhHH--HHHHHHHHHHHHhh
Confidence 22222 222 23556666777666553332 23888999999875
No 273
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.90 E-value=0.00018 Score=71.46 Aligned_cols=210 Identities=16% Similarity=0.127 Sum_probs=114.3
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEec-CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
++.....++++||+.||-.... ..+.+|+ -.-...+ .. ...|+.| ..+.|||||+.|+++..
T Consensus 144 ~g~~k~vaf~~~gs~latgg~d-----g~lRv~~~Ps~~t~l-~e-~~~~~eV------~DL~FS~dgk~lasig~---- 206 (398)
T KOG0771|consen 144 FGQQKVVAFNGDGSKLATGGTD-----GTLRVWEWPSMLTIL-EE-IAHHAEV------KDLDFSPDGKFLASIGA---- 206 (398)
T ss_pred cCcceEEEEcCCCCEeeecccc-----ceEEEEecCcchhhh-hh-HhhcCcc------ccceeCCCCcEEEEecC----
Confidence 3556788999999999865443 2344442 1111111 11 1112223 89999999999999732
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
....||+.++|... ..++...+......+|+-|+.. .
T Consensus 207 -----------------------------------------d~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~-~ 244 (398)
T KOG0771|consen 207 -----------------------------------------DSARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQ-E 244 (398)
T ss_pred -----------------------------------------CceEEEEeccCchhhhcCCcccchhhhhceecccCCC-c
Confidence 46789999888433 3322344556778899988843 1
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~ 279 (715)
.+.++......+. . +.+++...+- .+-...++.......+.....|+||+.++..+
T Consensus 245 ~l~laa~~~~~~~---v-----~~~~~~~w~~----------------~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT 300 (398)
T KOG0771|consen 245 TLRLAASQFPGGG---V-----RLCDISLWSG----------------SNFLRLRKKIKRFKSISSLAVSDDGKFLALGT 300 (398)
T ss_pred eEEEEEecCCCCc---e-----eEEEeeeecc----------------ccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence 1133333222110 0 1112222220 02224455555566789999999999999888
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
+.. ++-+++...=+...+. |..|...+..+.|+||.+++.= .+.+....+
T Consensus 301 ~dG-----------sVai~~~~~lq~~~~v------------------k~aH~~~VT~ltF~Pdsr~~~s-vSs~~~~~v 350 (398)
T KOG0771|consen 301 MDG-----------SVAIYDAKSLQRLQYV------------------KEAHLGFVTGLTFSPDSRYLAS-VSSDNEAAV 350 (398)
T ss_pred cCC-----------cEEEEEeceeeeeEee------------------hhhheeeeeeEEEcCCcCcccc-cccCCceeE
Confidence 753 3555554332211111 1122234567778888775433 333344456
Q ss_pred EEEEC
Q 005093 360 ISVNV 364 (715)
Q Consensus 360 ~~~d~ 364 (715)
..+-.
T Consensus 351 ~~l~v 355 (398)
T KOG0771|consen 351 TKLAV 355 (398)
T ss_pred EEEee
Confidence 55554
No 274
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.89 E-value=0.00065 Score=63.47 Aligned_cols=211 Identities=17% Similarity=0.171 Sum_probs=112.6
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCC-----cEEEEEcCCCCCCCc----hhhhhcCC-----C--CCCccchhh
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVG-----YSLLIVNYRGSLGFG----EEALQSLP-----G--KVGSQDVND 543 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G-----~~vi~~d~rG~~~~g----~~~~~~~~-----~--~~~~~~~~d 543 (715)
..| .||+||.++. ......++..|...+ -.++.+|--|+-..- .......- . ........=
T Consensus 45 ~iP-TIfIhGsgG~--asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIP-TIFIHGSGGT--ASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccc-eEEEecCCCC--hhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 445 5789995554 335566676665555 356666665532211 11111000 0 000111223
Q ss_pred HHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC-----ceeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 544 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 544 ~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
+..++.+|.+++. -.++-++||||||.....++..+.+ .+...|++++.++.....+.....+ +...
T Consensus 122 lk~~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~------v~~~ 193 (288)
T COG4814 122 LKKAMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTD------VLKD 193 (288)
T ss_pred HHHHHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchhe------eecc
Confidence 4567788888875 4689999999999998888876521 3556666666555211111111100 0000
Q ss_pred CCCCCCCCCChhhHHHHHhcCchhhccCC--CCcEEEEeeCCC------CcCCchHHHHHHHHHHHcCCcEEEEEeCC--
Q 005093 619 GKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQD------LRVPVSNGLQYARALREKGVETKVIVFPN-- 688 (715)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Lii~G~~D------~~v~~~~~~~~~~~l~~~g~~~~~~~~~~-- 688 (715)
... ....+. .+.+.. ...++ ..-+|+|.|+-| -.||...+...+..+...++...-.+++|
T Consensus 194 ~~~-~~~t~y---~~y~~~-----n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~ 264 (288)
T COG4814 194 GPG-LIKTPY---YDYIAK-----NYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKD 264 (288)
T ss_pred Ccc-ccCcHH---HHHHHh-----cceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCc
Confidence 000 011111 111111 11112 246899999865 45888888888888887777766656666
Q ss_pred CCccCCCCCchHHHHHHHHHHHHH
Q 005093 689 DVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+.|.-.. ++. .+.+.+..||-+
T Consensus 265 a~Hs~lh-en~-~v~~yv~~FLw~ 286 (288)
T COG4814 265 ARHSKLH-ENP-TVAKYVKNFLWE 286 (288)
T ss_pred chhhccC-CCh-hHHHHHHHHhhc
Confidence 4575443 332 566777777743
No 275
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.88 E-value=0.059 Score=64.22 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=69.2
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceee-eeeceecC-CCCCccccccCCCCCCcc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD-VIPVVQCA-EGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~-~~~~~~~~-~~~~~~g~~~~~~~~~~~ 340 (715)
....+++|||++|+++...+ .+|.++|+.+++...+..+... ...+.... .++.........+..+++
T Consensus 742 P~GIavspdG~~LYVADs~n----------~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvav 811 (1057)
T PLN02919 742 PSGISLSPDLKELYIADSES----------SSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLC 811 (1057)
T ss_pred ccEEEEeCCCCEEEEEECCC----------CeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeE
Confidence 45688999999887666442 4689999877654222110000 00000000 000000000113456778
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--------------CceeEEEeecCCEEEEEEeCCCCCCeEEE
Q 005093 341 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--------------NFSWSLLTLDGDNIIAVSSSPVDVPQVKY 406 (715)
Q Consensus 341 ~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--------------~~~~~~~s~~~~~l~~~~~~~~~p~~l~~ 406 (715)
++||+ +|++. .+..+|..+|++++.+..+..... ......++++|+ ++++ .+. ...|.+
T Consensus 812 d~dG~-LYVAD--s~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~-lyVa-Dt~--Nn~Irv 884 (1057)
T PLN02919 812 AKDGQ-IYVAD--SYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGR-LFVA-DTN--NSLIRY 884 (1057)
T ss_pred eCCCc-EEEEE--CCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCC-EEEE-ECC--CCEEEE
Confidence 89987 55543 345678889998888876653210 112235566664 4443 322 225777
Q ss_pred EeecccC
Q 005093 407 GYFVDKA 413 (715)
Q Consensus 407 ~~~~~~~ 413 (715)
+++.+++
T Consensus 885 id~~~~~ 891 (1057)
T PLN02919 885 LDLNKGE 891 (1057)
T ss_pred EECCCCc
Confidence 7776553
No 276
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.88 E-value=0.0011 Score=65.36 Aligned_cols=176 Identities=16% Similarity=0.092 Sum_probs=96.9
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
..+++||||+.+|++.... ....|++....+.....+
T Consensus 27 ~s~AvS~dg~~~A~v~~~~-----------------------------------------~~~~L~~~~~~~~~~~~~-- 63 (253)
T PF10647_consen 27 TSPAVSPDGSRVAAVSEGD-----------------------------------------GGRSLYVGPAGGPVRPVL-- 63 (253)
T ss_pred cceEECCCCCeEEEEEEcC-----------------------------------------CCCEEEEEcCCCcceeec--
Confidence 7899999999999987221 237789988754444333
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 259 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 259 (715)
.. .....++|+++|.- .++.. ... ...++..+.. .......+...
T Consensus 64 -~g-~~l~~PS~d~~g~~----W~v~~-~~~------------~~~~~~~~~~----------------g~~~~~~v~~~ 108 (253)
T PF10647_consen 64 -TG-GSLTRPSWDPDGWV----WTVDD-GSG------------GVRVVRDSAS----------------GTGEPVEVDWP 108 (253)
T ss_pred -cC-CccccccccCCCCE----EEEEc-CCC------------ceEEEEecCC----------------CcceeEEeccc
Confidence 22 25778899999764 33332 111 0122221110 11222223222
Q ss_pred Cc--cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeec--CCCC-CCCcccceeeeeeceecCCCCCccccccCC
Q 005093 260 IS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW--PTNG-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 260 ~~--~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~-~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
.. .+..+++||||.++++...... ..+|++.-+ +..+ ...++... .+ .... ...
T Consensus 109 ~~~~~I~~l~vSpDG~RvA~v~~~~~--------~~~v~va~V~r~~~g~~~~l~~~~-~~---~~~~---------~~~ 167 (253)
T PF10647_consen 109 GLRGRITALRVSPDGTRVAVVVEDGG--------GGRVYVAGVVRDGDGVPRRLTGPR-RV---APPL---------LSD 167 (253)
T ss_pred ccCCceEEEEECCCCcEEEEEEecCC--------CCeEEEEEEEeCCCCCcceeccce-Ee---cccc---------cCc
Confidence 11 6888999999999999997742 245776554 3333 22332211 11 0000 013
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA 375 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~ 375 (715)
...+.|.++++.+++.......... .+....+..+.+...
T Consensus 168 v~~v~W~~~~~L~V~~~~~~~~~~~-~v~~dG~~~~~l~~~ 207 (253)
T PF10647_consen 168 VTDVAWSDDSTLVVLGRSAGGPVVR-LVSVDGGPSTPLPSV 207 (253)
T ss_pred ceeeeecCCCEEEEEeCCCCCceeE-EEEccCCcccccCCC
Confidence 4578899998755554443332233 466667777777433
No 277
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.88 E-value=0.0016 Score=76.07 Aligned_cols=231 Identities=12% Similarity=0.078 Sum_probs=117.6
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCC-CCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 90 (715)
....|.++|+.+... ..+ +..+.+.+...+|+| ||..|+-.... ....+| ..+...........
T Consensus 553 ~Dg~v~lWd~~~~~~-~~~-----~~~H~~~V~~l~~~p~~~~~L~Sgs~D-----g~v~iWd~~~~~~~~~~~~~~~-- 619 (793)
T PLN00181 553 FEGVVQVWDVARSQL-VTE-----MKEHEKRVWSIDYSSADPTLLASGSDD-----GSVKLWSINQGVSIGTIKTKAN-- 619 (793)
T ss_pred CCCeEEEEECCCCeE-EEE-----ecCCCCCEEEEEEcCCCCCEEEEEcCC-----CEEEEEECCCCcEEEEEecCCC--
Confidence 344566666654321 111 222336688999997 77777655333 245556 33333222221111
Q ss_pred ccccCCCcccceeec-CCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 91 GSVYADGWFEGISWN-SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 91 ~~~~~~~~~~~~~wS-pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
+..+.|+ ++|+.|+..+. ...|++||+
T Consensus 620 --------v~~v~~~~~~g~~latgs~--------------------------------------------dg~I~iwD~ 647 (793)
T PLN00181 620 --------ICCVQFPSESGRSLAFGSA--------------------------------------------DHKVYYYDL 647 (793)
T ss_pred --------eEEEEEeCCCCCEEEEEeC--------------------------------------------CCeEEEEEC
Confidence 2577884 57888777532 267999999
Q ss_pred cCCce--EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccC
Q 005093 170 NSGEV--QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESS 247 (715)
Q Consensus 170 ~~g~~--~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 247 (715)
.++.. ..+ ......+..+.|+ |+.. |+..+ .+..|.++|+.. ....
T Consensus 648 ~~~~~~~~~~--~~h~~~V~~v~f~-~~~~----lvs~s---------------~D~~ikiWd~~~----------~~~~ 695 (793)
T PLN00181 648 RNPKLPLCTM--IGHSKTVSYVRFV-DSST----LVSSS---------------TDNTLKLWDLSM----------SISG 695 (793)
T ss_pred CCCCccceEe--cCCCCCEEEEEEe-CCCE----EEEEE---------------CCCEEEEEeCCC----------Cccc
Confidence 76542 233 2223356678887 6665 55544 122455666510 0000
Q ss_pred CCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cc-cceeeeeeceecCCCC
Q 005093 248 SEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SL-EKIVDVIPVVQCAEGD 325 (715)
Q Consensus 248 ~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt-~~~~~~~~~~~~~~~~ 325 (715)
........+...........|+|+|++|+..+.+. .+++++........ .. ...+.+..+. ...
T Consensus 696 ~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~-----------~v~iw~~~~~~~~~s~~~~~~~~~~~~~-~~~-- 761 (793)
T PLN00181 696 INETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN-----------EVFVYHKAFPMPVLSYKFKTIDPVSGLE-VDD-- 761 (793)
T ss_pred cCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCC-----------EEEEEECCCCCceEEEecccCCcccccc-cCC--
Confidence 01123345555555567788999999887766553 46777754432110 00 0000000000 000
Q ss_pred CccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 326 CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 326 ~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
....+..++|++++..+ ++....+...+|.
T Consensus 762 -----~~~~V~~v~ws~~~~~l-va~~~dG~I~i~~ 791 (793)
T PLN00181 762 -----ASQFISSVCWRGQSSTL-VAANSTGNIKILE 791 (793)
T ss_pred -----CCcEEEEEEEcCCCCeE-EEecCCCcEEEEe
Confidence 00124577899999854 5555566555553
No 278
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.87 E-value=0.00044 Score=66.06 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=86.0
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC--c--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL--S--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~--~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.++..++-- +++++|+||-.|.-+.+... . .....++.+.++ |.|+-+|.+|...- ...++..+...
T Consensus 33 ~v~V~V~Gd----~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~g----Ap~~p~~y~yP 103 (326)
T KOG2931|consen 33 VVHVTVYGD----PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDG----APSFPEGYPYP 103 (326)
T ss_pred cEEEEEecC----CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccC----CccCCCCCCCC
Confidence 366555531 33478889999984433211 1 112344556666 99999999984322 22345555556
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 596 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 596 (715)
.++++.+.+-.+.+.. .-+.|.-+|--+|+++..++|..||+++-++|++++...
T Consensus 104 smd~LAd~l~~VL~~f--~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 104 SMDDLADMLPEVLDHF--GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred CHHHHHHHHHHHHHhc--CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 6888888888888774 457799999999999999999999999999999987553
No 279
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=97.85 E-value=0.00082 Score=62.89 Aligned_cols=244 Identities=10% Similarity=0.001 Sum_probs=132.6
Q ss_pred ccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCC-CeEEEEe-c-------CCc
Q 005093 8 NLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES-PIQFELW-S-------QSQ 78 (715)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~-~~~~~~~-~-------~~~ 78 (715)
.+.+...+..+.++|+.++.. |..-+++ ..+...-||++|..+++..+..-+. .-+..+. . ..+
T Consensus 66 ~liTGSAD~t~kLWDv~tGk~----la~~k~~---~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~e 138 (327)
T KOG0643|consen 66 HLITGSADQTAKLWDVETGKQ----LATWKTN---SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEE 138 (327)
T ss_pred eeeeccccceeEEEEcCCCcE----EEEeecC---CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccC
Confidence 345556667777777877653 2222222 2367788999999999887653222 2233333 1 112
Q ss_pred cEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCC
Q 005093 79 LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAG 158 (715)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 158 (715)
+...+..+... +...-|+|-|+.|.+.-
T Consensus 139 p~~kI~t~~sk---------it~a~Wg~l~~~ii~Gh------------------------------------------- 166 (327)
T KOG0643|consen 139 PYLKIPTPDSK---------ITSALWGPLGETIIAGH------------------------------------------- 166 (327)
T ss_pred ceEEecCCccc---------eeeeeecccCCEEEEec-------------------------------------------
Confidence 22222222221 26788999999998742
Q ss_pred ccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 159 KRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 159 ~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
....|-.||+.+|+...-.....+..+.++++|||... ++..+ .+..--++|.
T Consensus 167 -e~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~----FiT~s---------------~Dttakl~D~------- 219 (327)
T KOG0643|consen 167 -EDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTY----FITGS---------------KDTTAKLVDV------- 219 (327)
T ss_pred -CCCcEEEEEcccCceeeechhhhccccccccccCCcce----EEecc---------------cCccceeeec-------
Confidence 23568899999886543311223346889999999886 55443 1123334443
Q ss_pred hhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 239 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
.+-+...-...+......++||--..++.....+. .++-.-+...++. . .....+
T Consensus 220 ----------~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA---------~dVTTT~~r~GKF---E---ArFyh~ 274 (327)
T KOG0643|consen 220 ----------RTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEA---------MDVTTTSTRAGKF---E---ARFYHL 274 (327)
T ss_pred ----------cceeeEEEeeecccccceecccccceEEecCCcee---------eeeeeecccccch---h---hhHHHH
Confidence 33333332233445677888998887776554321 1222222111111 0 001111
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
+-+.+=+...| +-+.+..++++|||+ .|.+..++|-.+|..+|.
T Consensus 275 i~eEEigrvkG-HFGPINsvAfhPdGk-sYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 275 IFEEEIGRVKG-HFGPINSVAFHPDGK-SYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred HHHHHhccccc-cccCcceeEECCCCc-ccccCCCCceEEEEEecc
Confidence 11111122222 223678999999998 667777777778877764
No 280
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.84 E-value=4.5e-05 Score=66.11 Aligned_cols=119 Identities=18% Similarity=0.240 Sum_probs=81.2
Q ss_pred HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCC
Q 005093 545 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFT 624 (715)
Q Consensus 545 ~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (715)
.+.-+|++++. -+.+..+.|.||||+.++.+..++|++|..+|+.+++++...+++..--.
T Consensus 88 ~AyerYv~eEa--lpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yydd----------------- 148 (227)
T COG4947 88 RAYERYVIEEA--LPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDD----------------- 148 (227)
T ss_pred HHHHHHHHHhh--cCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccC-----------------
Confidence 34456777774 23557789999999999999999999999999999999887554321000
Q ss_pred CCCChhhHHHHHhcCchhhccCCC----------CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 625 ESPSVEDLTRFHSKSPISHISKVK----------TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 625 ~~~~~~~~~~~~~~sp~~~~~~i~----------~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
+.+. ++|..++..+. ..+.+..|..|+..+ +...+.+.+..+.++..+.+..+..|.+
T Consensus 149 --------Dv~y-nsP~dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 149 --------DVYY-NSPSDYLPGLADPFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred --------ceee-cChhhhccCCcChHHHHHHhhccEEEEecCcccccc--chHHHHHHhccccccHHHHHhccccccc
Confidence 0111 34444443333 346777888888774 4566777788777787777776655643
No 281
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.83 E-value=0.0021 Score=63.20 Aligned_cols=58 Identities=16% Similarity=0.204 Sum_probs=40.7
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
....+++||||+.+|++...+ +...++....++....+.. .... ..++|+++|. +.++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~-~~~~L~~~~~~~~~~~~~~-g~~l----------~~PS~d~~g~-~W~v 82 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGD-GGRSLYVGPAGGPVRPVLT-GGSL----------TRPSWDPDGW-VWTV 82 (253)
T ss_pred cccceEECCCCCeEEEEEEcC-CCCEEEEEcCCCcceeecc-CCcc----------ccccccCCCC-EEEE
Confidence 578999999999999998333 5667777665555555442 1233 7999999964 5554
No 282
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.81 E-value=2.1e-05 Score=79.91 Aligned_cols=114 Identities=15% Similarity=0.204 Sum_probs=63.5
Q ss_pred CCCCcEEEEEcCCCCCCCCccc-hHHHHHH-Hh--CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHH
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSY-SKSLAFL-SS--VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID 553 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~-~~~~~~l-a~--~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 553 (715)
+...|++|++||.........| ..+...+ .. ..+.|+++|+...... ....+.. + .......+...|..|.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~-n-~~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVA-N-TRLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHH-H-HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhh-h-HHHHHHHHHHHHHHHHh
Confidence 4578999999995444312233 3344434 44 5899999998631110 0100000 0 00012345566777775
Q ss_pred cCCCCCceEEEEEeChhHHHHHHHHhhCCC--ceeEEEecCCcc
Q 005093 554 MGLANPSKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPLC 595 (715)
Q Consensus 554 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~ 595 (715)
...++.++|.|+|||+||++|..++..... ++..+..+.|..
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 555889999999999999999988887666 788888777754
No 283
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.80 E-value=0.0019 Score=66.01 Aligned_cols=240 Identities=14% Similarity=0.080 Sum_probs=135.2
Q ss_pred EEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEE--ec-CccccccccCCCcccceeecCCC--CeEEEEeecCCCC
Q 005093 47 AVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEF--HV-PQTVHGSVYADGWFEGISWNSDE--TLIAYVAEEPSPS 121 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~wSpDg--~~la~~~~~~~~~ 121 (715)
..+||-|.+++|.+...+ ++....++...+.- .+ +.++ ..++|||-| .-|+|.+.....
T Consensus 136 ~~k~s~~D~y~ARvv~~s-----l~i~e~t~n~~~~p~~~lr~~gi----------~dFsisP~~n~~~la~~tPEk~~- 199 (561)
T COG5354 136 VLKFSIDDKYVARVVGSS-----LYIHEITDNIEEHPFKNLRPVGI----------LDFSISPEGNHDELAYWTPEKLN- 199 (561)
T ss_pred eeeeeecchhhhhhccCe-----EEEEecCCccccCchhhccccce----------eeEEecCCCCCceEEEEccccCC-
Confidence 568899999999885432 33322233332111 11 1232 789999974 457787544311
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
...++.++.+-.+.+.... +-.....-++.|.+.|+.
T Consensus 200 --------------------------------------kpa~~~i~sIp~~s~l~tk-~lfk~~~~qLkW~~~g~~---- 236 (561)
T COG5354 200 --------------------------------------KPAMVRILSIPKNSVLVTK-NLFKVSGVQLKWQVLGKY---- 236 (561)
T ss_pred --------------------------------------CCcEEEEEEccCCCeeeee-eeEeecccEEEEecCCce----
Confidence 1234444444333322221 233345568899999999
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
|++...+... -+..+ -+.+.||++++ ....+...-...+.+.+..|+|++++++..+.-
T Consensus 237 ll~l~~t~~k--snKsy--fgesnLyl~~~-----------------~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~ 295 (561)
T COG5354 237 LLVLVMTHTK--SNKSY--FGESNLYLLRI-----------------TERSIPVEKDLKDPVHDFTWEPLSSRFAVISGY 295 (561)
T ss_pred EEEEEEEeee--cccce--eccceEEEEee-----------------cccccceeccccccceeeeecccCCceeEEecc
Confidence 8887654431 11111 13357999997 433332222446678899999999999988832
Q ss_pred CCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 282 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 282 ~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
. . ..+-..|+.++-...+... .-..+.|+|.++++++..-..-...+-.
T Consensus 296 ~-------p--a~~s~~~lr~Nl~~~~Pe~----------------------~rNT~~fsp~~r~il~agF~nl~gni~i 344 (561)
T COG5354 296 M-------P--ASVSVFDLRGNLRFYFPEQ----------------------KRNTIFFSPHERYILFAGFDNLQGNIEI 344 (561)
T ss_pred c-------c--cceeecccccceEEecCCc----------------------ccccccccCcccEEEEecCCccccceEE
Confidence 1 1 1244556655321111110 1245678999999988766555556667
Q ss_pred EECCCCcEEEe-cCCCCCceeEEEeecCCEEEEEEeCC
Q 005093 362 VNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVSSSP 398 (715)
Q Consensus 362 ~d~~tg~~~~l-~~~~~~~~~~~~s~~~~~l~~~~~~~ 398 (715)
+|..+. ...+ .....+-+...|++|+..+.....++
T Consensus 345 ~~~~~r-f~~~~~~~~~n~s~~~wspd~qF~~~~~ts~ 381 (561)
T COG5354 345 FDPAGR-FKVAGAFNGLNTSYCDWSPDGQFYDTDTTSE 381 (561)
T ss_pred eccCCc-eEEEEEeecCCceEeeccCCceEEEecCCCc
Confidence 787543 3333 22222346678899887666544443
No 284
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.78 E-value=0.00024 Score=69.79 Aligned_cols=111 Identities=15% Similarity=0.200 Sum_probs=75.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-----~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
|+..+.+..+.-+ ..++...||++-|.+...... ....+.....+.|..|+.++|||.+. +-. ..+
T Consensus 120 D~~~IDt~~I~~~---~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~---S~G---~~s 190 (365)
T PF05677_consen 120 DGVKIDTMAIHQP---EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS---STG---PPS 190 (365)
T ss_pred CCEEEEEEEeeCC---CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc---CCC---CCC
Confidence 7788888776522 235667888888844332111 11234555677899999999999543 311 111
Q ss_pred CCccchhhHHHHHHHHHHcC-CCCCceEEEEEeChhHHHHHHHHhhC
Q 005093 536 VGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQA 581 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~-~~d~~~i~l~G~S~GG~~a~~~a~~~ 581 (715)
....+.|..+.++||+++. .+.+++|.+.|||+||.+++.++.++
T Consensus 191 -~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 191 -RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred -HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 1233778889999999753 47889999999999999988766554
No 285
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.77 E-value=0.00028 Score=68.43 Aligned_cols=231 Identities=13% Similarity=0.172 Sum_probs=113.1
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-----HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~-----~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
.++..++-. ..+++|+||-.|--+.+. ...|.. .++.+ .+.|.++-+|.+|...-.. .++..+..
T Consensus 10 ~v~V~v~G~----~~~~kp~ilT~HDvGlNh-~scF~~ff~~~~m~~i-~~~f~i~Hi~aPGqe~ga~----~~p~~y~y 79 (283)
T PF03096_consen 10 SVHVTVQGD----PKGNKPAILTYHDVGLNH-KSCFQGFFNFEDMQEI-LQNFCIYHIDAPGQEEGAA----TLPEGYQY 79 (283)
T ss_dssp EEEEEEESS------TTS-EEEEE--TT--H-HHHCHHHHCSHHHHHH-HTTSEEEEEE-TTTSTT---------TT---
T ss_pred EEEEEEEec----CCCCCceEEEeccccccc-hHHHHHHhcchhHHHH-hhceEEEEEeCCCCCCCcc----cccccccc
Confidence 455555532 334799999999844321 111222 23333 5679999999999554222 23444444
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc------------CCCC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------TTDI 606 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~------------~~~~ 606 (715)
..++++.+.+..+.+.. .-+.+.-+|--+|+++-+.+|..+|+++.++|++++......+.. ...+
T Consensus 80 Psmd~LAe~l~~Vl~~f--~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF--GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp --HHHHHCTHHHHHHHH--T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred cCHHHHHHHHHHHHHhC--CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 55777777777777763 346799999999999999999999999999999998764321110 0000
Q ss_pred CCc----eeeeccCCCCCC-----------CCCCCCChhhHHHHH----hc-CchhhccCCCCcEEEEeeCCCCcCCchH
Q 005093 607 PDW----CYVESYGSKGKD-----------SFTESPSVEDLTRFH----SK-SPISHISKVKTPTIFLLGAQDLRVPVSN 666 (715)
Q Consensus 607 ~~~----~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~----~~-sp~~~~~~i~~P~Lii~G~~D~~v~~~~ 666 (715)
... .....|+..... .+.......+...+. .+ +.........||+|++.|+.-+.+ +.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hh
Confidence 000 000001100000 000000001111111 11 111123455699999999988766 67
Q ss_pred HHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 667 GLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 667 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
+.++..+|.. ....++.++++|-....++ .....+.+.=|++
T Consensus 236 vv~~ns~Ldp--~~ttllkv~dcGglV~eEq-P~klaea~~lFlQ 277 (283)
T PF03096_consen 236 VVEMNSKLDP--TKTTLLKVADCGGLVLEEQ-PGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHS-C--CCEEEEEETT-TT-HHHH--HHHHHHHHHHHHH
T ss_pred HHHHHhhcCc--ccceEEEecccCCcccccC-cHHHHHHHHHHHc
Confidence 7778777743 4678999999876544222 2244455554543
No 286
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=97.76 E-value=0.00045 Score=71.94 Aligned_cols=160 Identities=9% Similarity=0.138 Sum_probs=94.2
Q ss_pred CCCcccceeecC-CCCeEEEEeecCCCCCCCccCCCC--CCCCCCc-----CCCCCCCCCcccCCcCcccC-CccCceEE
Q 005093 95 ADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGST--KGGSSDK-----DCNSWKGQGDWEEDWGETYA-GKRQPSLF 165 (715)
Q Consensus 95 ~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~g~~~~-~~~~~~l~ 165 (715)
+...+..+.|.| |..+||...++.... .|.+... +.....+ ...+.+..++|.|-....+. ......|-
T Consensus 626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~--lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~ 703 (1012)
T KOG1445|consen 626 NGTLVTDLHWDPFDDERLAVATDDGQIN--LWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIE 703 (1012)
T ss_pred cCceeeecccCCCChHHeeecccCceEE--EEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceee
Confidence 334557899999 788899877665433 2322211 1111111 12333344555543322222 22347899
Q ss_pred EEEccCCceE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhh
Q 005093 166 VININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 244 (715)
Q Consensus 166 ~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (715)
+||+.+++.+ .+ ......+.+++|||||+. |+.+. .+..|.++..
T Consensus 704 lWDl~~~~~~~~l--~gHtdqIf~~AWSpdGr~----~AtVc---------------KDg~~rVy~P------------- 749 (1012)
T KOG1445|consen 704 LWDLANAKLYSRL--VGHTDQIFGIAWSPDGRR----IATVC---------------KDGTLRVYEP------------- 749 (1012)
T ss_pred eeehhhhhhhhee--ccCcCceeEEEECCCCcc----eeeee---------------cCceEEEeCC-------------
Confidence 9999988765 34 233346779999999999 98876 3346777774
Q ss_pred ccCCCCCCceecCCCCc----cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 245 ESSSEDLPVVNLTESIS----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 245 ~~~~~~~~~~~lt~~~~----~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
.++ .+.+.+..+ .-..+.|.=||+.|+.+..+. ....+|.++|.++
T Consensus 750 ----rs~-e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk-------~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 750 ----RSR-EQPVYEGKGPVGTRGARILWACDGRIVIVVGFDK-------SSERQVQMYDAQT 799 (1012)
T ss_pred ----CCC-CCccccCCCCccCcceeEEEEecCcEEEEecccc-------cchhhhhhhhhhh
Confidence 333 334444333 245688999999988877664 2334566666554
No 287
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.73 E-value=9.9e-05 Score=69.84 Aligned_cols=89 Identities=25% Similarity=0.459 Sum_probs=53.6
Q ss_pred EEEEcCCCCCCCCccchHHHHHHHhCCcE---EEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 484 IVVLHGGPHSVSLSSYSKSLAFLSSVGYS---LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 484 vv~iHGg~~~~~~~~~~~~~~~la~~G~~---vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
|||+||.... ....|..+.+.|+++||. |++++|-.... ........ .....+.++.++|+.+++. ...
T Consensus 4 VVlVHG~~~~-~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~--~~~~~~~~--~~~~~~~~l~~fI~~Vl~~--TGa- 75 (219)
T PF01674_consen 4 VVLVHGTGGN-AYSNWSTLAPYLKAAGYCDSEVYALTYGSGNG--SPSVQNAH--MSCESAKQLRAFIDAVLAY--TGA- 75 (219)
T ss_dssp EEEE--TTTT-TCGGCCHHHHHHHHTT--CCCEEEE--S-CCH--HTHHHHHH--B-HHHHHHHHHHHHHHHHH--HT--
T ss_pred EEEECCCCcc-hhhCHHHHHHHHHHcCCCcceeEeccCCCCCC--CCcccccc--cchhhHHHHHHHHHHHHHh--hCC-
Confidence 8899995532 256888999999999999 79999854221 01111000 1112246778888888765 345
Q ss_pred eEEEEEeChhHHHHHHHHhh
Q 005093 561 KVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~ 580 (715)
||-|+||||||.++-+++.-
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999999887753
No 288
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=97.72 E-value=0.0024 Score=60.97 Aligned_cols=255 Identities=11% Similarity=0.078 Sum_probs=140.1
Q ss_pred ccccccccccccceEEEEEEEeec------------CCCCcc-ccccCCCccccccceEEeeCCCCceEEEEecCCCCCC
Q 005093 2 FSISQPNLLANKRKKFMLSTVISK------------ENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 68 (715)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~ 68 (715)
|+..+.=+-+...+..|.++|+.. ++..+. .+ ...|..+...+....|-|-...|+-.++. +.-
T Consensus 120 fs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPv-IRTlYDH~devn~l~FHPre~ILiS~srD--~tv 196 (430)
T KOG0640|consen 120 FSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPV-IRTLYDHVDEVNDLDFHPRETILISGSRD--NTV 196 (430)
T ss_pred eCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCce-EeehhhccCcccceeecchhheEEeccCC--CeE
Confidence 444444555667888888877761 111000 11 11244455667888888988877655443 344
Q ss_pred eEEEEecC--CccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCC
Q 005093 69 IQFELWSQ--SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 146 (715)
Q Consensus 69 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (715)
.+|.+.+. +++.++++....+ ..++|.|.|.+|+...+.
T Consensus 197 KlFDfsK~saKrA~K~~qd~~~v----------rsiSfHPsGefllvgTdH----------------------------- 237 (430)
T KOG0640|consen 197 KLFDFSKTSAKRAFKVFQDTEPV----------RSISFHPSGEFLLVGTDH----------------------------- 237 (430)
T ss_pred EEEecccHHHHHHHHHhhcccee----------eeEeecCCCceEEEecCC-----------------------------
Confidence 45555422 2333444433333 799999999999885332
Q ss_pred cccCCcCcccCCccCceEEEEEccCCceEeec--CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCc
Q 005093 147 DWEEDWGETYAGKRQPSLFVININSGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 224 (715)
Q Consensus 147 ~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~--~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~ 224 (715)
+.+.++|++|-+-..-. .......+.++.+|+.|+ |+.++.. ++
T Consensus 238 ---------------p~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~-----lYvTaSk--------------DG 283 (430)
T KOG0640|consen 238 ---------------PTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGS-----LYVTASK--------------DG 283 (430)
T ss_pred ---------------CceeEEeccceeEeeecCcccccccceeEEEecCCcc-----EEEEecc--------------CC
Confidence 56788888765432211 011223577899999998 5655532 23
Q ss_pred eEEEEecccccchhhhhhhhccCCCCCCce-ecCC--CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC
Q 005093 225 ALYAVRVSLYKSEASELELKESSSEDLPVV-NLTE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 301 (715)
Q Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~--~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~ 301 (715)
.|-++|= .++... .+-+ ....+.+..|+.+||+|+-...+. -++++.+.
T Consensus 284 ~IklwDG-----------------VS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS-----------~vkLWEi~ 335 (430)
T KOG0640|consen 284 AIKLWDG-----------------VSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDS-----------TVKLWEIS 335 (430)
T ss_pred cEEeecc-----------------ccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcc-----------eeeeeeec
Confidence 5666662 233322 2222 222478899999999886443332 36677777
Q ss_pred CCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC
Q 005093 302 TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE 376 (715)
Q Consensus 302 ~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~ 376 (715)
++.....-.+.. ..+. + .--.+..|.....+++| .+.....|..||..++....+....
T Consensus 336 t~R~l~~YtGAg---------~tgr--q---~~rtqAvFNhtEdyVl~--pDEas~slcsWdaRtadr~~l~slg 394 (430)
T KOG0640|consen 336 TGRMLKEYTGAG---------TTGR--Q---KHRTQAVFNHTEDYVLF--PDEASNSLCSWDARTADRVALLSLG 394 (430)
T ss_pred CCceEEEEecCC---------cccc--h---hhhhhhhhcCccceEEc--cccccCceeeccccchhhhhhcccC
Confidence 765422111100 0000 0 00123345545555554 3344568888998888777665443
No 289
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.70 E-value=0.0031 Score=62.23 Aligned_cols=177 Identities=16% Similarity=0.132 Sum_probs=96.6
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEe-cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWA-PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~s-pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|+.+++++++.+.+. ... ...+.+. +||+ ++++. . ..+.++|+
T Consensus 22 ~~i~~~~~~~~~~~~~~--~~~--~~G~~~~~~~g~-----l~v~~-~---------------~~~~~~d~--------- 67 (246)
T PF08450_consen 22 GRIYRVDPDTGEVEVID--LPG--PNGMAFDRPDGR-----LYVAD-S---------------GGIAVVDP--------- 67 (246)
T ss_dssp TEEEEEETTTTEEEEEE--SSS--EEEEEEECTTSE-----EEEEE-T---------------TCEEEEET---------
T ss_pred CEEEEEECCCCeEEEEe--cCC--CceEEEEccCCE-----EEEEE-c---------------CceEEEec---------
Confidence 67999999999887662 222 4455666 6644 54443 1 13555586
Q ss_pred hhhhccCCCCCCceecCCC------CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceee
Q 005093 241 LELKESSSEDLPVVNLTES------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 314 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~------~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~ 314 (715)
++++.+.+... .....+.+++|||+ |+++........ ......||+++.. ++...+....
T Consensus 68 --------~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~--~~~~g~v~~~~~~-~~~~~~~~~~-- 133 (246)
T PF08450_consen 68 --------DTGKVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGAS--GIDPGSVYRIDPD-GKVTVVADGL-- 133 (246)
T ss_dssp --------TTTEEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTT--CGGSEEEEEEETT-SEEEEEEEEE--
T ss_pred --------CCCcEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccc--cccccceEEECCC-CeEEEEecCc--
Confidence 66666555432 22467899999998 777766542110 0111569999877 3432221111
Q ss_pred eeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC--CCcE---EEecC-CCCC--ceeEEEee
Q 005093 315 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS--SGEL---LRITP-AESN--FSWSLLTL 386 (715)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~--tg~~---~~l~~-~~~~--~~~~~~s~ 386 (715)
.....++|+||++.||++.... .+|++++++ +++. +.+.. .... .....++.
T Consensus 134 ------------------~~pNGi~~s~dg~~lyv~ds~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~ 193 (246)
T PF08450_consen 134 ------------------GFPNGIAFSPDGKTLYVADSFN--GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS 193 (246)
T ss_dssp ------------------SSEEEEEEETTSSEEEEEETTT--TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT
T ss_pred ------------------ccccceEECCcchheeeccccc--ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC
Confidence 0234678999999888755443 468888775 3312 22222 1111 22223344
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeec
Q 005093 387 DGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 387 ~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+| .|+++.. ....|++++..
T Consensus 194 ~G-~l~va~~---~~~~I~~~~p~ 213 (246)
T PF08450_consen 194 DG-NLWVADW---GGGRIVVFDPD 213 (246)
T ss_dssp TS--EEEEEE---TTTEEEEEETT
T ss_pred CC-CEEEEEc---CCCEEEEECCC
Confidence 44 4555443 44468888755
No 290
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.67 E-value=0.023 Score=54.82 Aligned_cols=197 Identities=12% Similarity=0.103 Sum_probs=123.9
Q ss_pred ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec
Q 005093 99 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK 178 (715)
Q Consensus 99 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~ 178 (715)
+..+.||+||..++-.+++ ..|.++|...|+.....
T Consensus 17 i~sl~fs~~G~~litss~d--------------------------------------------Dsl~LYd~~~g~~~~ti 52 (311)
T KOG1446|consen 17 INSLDFSDDGLLLITSSED--------------------------------------------DSLRLYDSLSGKQVKTI 52 (311)
T ss_pred eeEEEecCCCCEEEEecCC--------------------------------------------CeEEEEEcCCCceeeEe
Confidence 4799999999988875432 46889999888765542
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecC
Q 005093 179 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLT 257 (715)
Q Consensus 179 ~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt 257 (715)
....+.+.-+.|...... +++++.. .+..|..+++ .+.+ .+...
T Consensus 53 -~skkyG~~~~~Fth~~~~----~i~sStk-------------~d~tIryLsl-----------------~dNkylRYF~ 97 (311)
T KOG1446|consen 53 -NSKKYGVDLACFTHHSNT----VIHSSTK-------------EDDTIRYLSL-----------------HDNKYLRYFP 97 (311)
T ss_pred -ecccccccEEEEecCCce----EEEccCC-------------CCCceEEEEe-----------------ecCceEEEcC
Confidence 455667778889887777 7777632 1236888887 5555 45556
Q ss_pred CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCC
Q 005093 258 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 337 (715)
Q Consensus 258 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 337 (715)
.+...+.+...||-+..++-.+.+. .|.++|+...+-+-+- . ..+..-
T Consensus 98 GH~~~V~sL~~sP~~d~FlS~S~D~-----------tvrLWDlR~~~cqg~l-------~--------------~~~~pi 145 (311)
T KOG1446|consen 98 GHKKRVNSLSVSPKDDTFLSSSLDK-----------TVRLWDLRVKKCQGLL-------N--------------LSGRPI 145 (311)
T ss_pred CCCceEEEEEecCCCCeEEecccCC-----------eEEeeEecCCCCceEE-------e--------------cCCCcc
Confidence 6667789999999887665444443 4788888754331110 0 012334
Q ss_pred CccccCCCEEEEEeeeCCeeEEEEEECC---CCcEEEecCC---CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 338 NPWLSDGCTMLLSSIWGSSQVIISVNVS---SGELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 338 ~~~~~dg~~l~~~~~~~~~~~l~~~d~~---tg~~~~l~~~---~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
.++.|.|- ++....... .|-.+|++ .|-.+.+... ........||+||..+++.. +-..++++|.-+
T Consensus 146 ~AfDp~GL-ifA~~~~~~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT----~~s~~~~lDAf~ 218 (311)
T KOG1446|consen 146 AAFDPEGL-IFALANGSE--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST----NASFIYLLDAFD 218 (311)
T ss_pred eeECCCCc-EEEEecCCC--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe----CCCcEEEEEccC
Confidence 56888884 434433333 45555654 3444444433 12344568999999888754 334577777555
Q ss_pred cC
Q 005093 412 KA 413 (715)
Q Consensus 412 ~~ 413 (715)
|+
T Consensus 219 G~ 220 (311)
T KOG1446|consen 219 GT 220 (311)
T ss_pred Cc
Confidence 54
No 291
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.65 E-value=0.00044 Score=67.86 Aligned_cols=65 Identities=15% Similarity=0.249 Sum_probs=57.9
Q ss_pred CCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 646 KVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 646 ~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
...+|-|++.++.|.+++.+..+++.+..++.|.+++...+++..|.-......++.++.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 44589999999999999999999999999999999999999999998777777778888887764
No 292
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.65 E-value=0.0001 Score=77.69 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=66.0
Q ss_pred CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHH
Q 005093 496 LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTT 575 (715)
Q Consensus 496 ~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~ 575 (715)
...|..+++.|++.||.+ ..|++| +|.+|+.. ......++++.+.++.+.+.. ...++.|+||||||.++.
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g---~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFG---FGYDFRQS---NRLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCccc---CCCCcccc---ccHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHH
Confidence 346788899999999876 789998 66666532 111223567777777776652 347899999999999999
Q ss_pred HHHhhCCCc----eeEEEecCCcc
Q 005093 576 HLIGQAPDK----FVAAAARNPLC 595 (715)
Q Consensus 576 ~~a~~~p~~----~~~~v~~~~~~ 595 (715)
.++..+|+. ++.+|++++..
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCC
Confidence 998887763 57777766644
No 293
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=97.63 E-value=0.001 Score=61.57 Aligned_cols=135 Identities=7% Similarity=0.076 Sum_probs=85.8
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+||..+|...+- ...+..+.++..|+||+ |+.++.. ..|-.+|.
T Consensus 165 ~tVRLWD~rTgt~v~s--L~~~s~VtSlEvs~dG~-----ilTia~g---------------ssV~Fwda---------- 212 (334)
T KOG0278|consen 165 KTVRLWDHRTGTEVQS--LEFNSPVTSLEVSQDGR-----ILTIAYG---------------SSVKFWDA---------- 212 (334)
T ss_pred CceEEEEeccCcEEEE--EecCCCCcceeeccCCC-----EEEEecC---------------ceeEEecc----------
Confidence 5689999999876554 34455788899999999 5555421 13445553
Q ss_pred hhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceec
Q 005093 242 ELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC 321 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~ 321 (715)
.+-....-..-+..+.+.+.+|+-. ++....++ .-+|.+|..++..+-.-
T Consensus 213 -------ksf~~lKs~k~P~nV~SASL~P~k~-~fVaGged----------~~~~kfDy~TgeEi~~~------------ 262 (334)
T KOG0278|consen 213 -------KSFGLLKSYKMPCNVESASLHPKKE-FFVAGGED----------FKVYKFDYNTGEEIGSY------------ 262 (334)
T ss_pred -------ccccceeeccCccccccccccCCCc-eEEecCcc----------eEEEEEeccCCceeeec------------
Confidence 2222222222344577888999874 43344332 34889999887753221
Q ss_pred CCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 322 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 322 ~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
..| +-..+..+.|+|||. +|.+.+++|..+||...+.
T Consensus 263 -----nkg-h~gpVhcVrFSPdGE-~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 263 -----NKG-HFGPVHCVRFSPDGE-LYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred -----ccC-CCCceEEEEECCCCc-eeeccCCCceEEEEEecCC
Confidence 011 112455778999997 8888899999999988763
No 294
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.63 E-value=0.004 Score=67.56 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=58.1
Q ss_pred CCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCc
Q 005093 145 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 224 (715)
Q Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~ 224 (715)
++.|..+ +-.+.......+.+|.+...+=..+ ......++.++|.|-..+ ...++-.+ .
T Consensus 374 DlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~--F~HndfVTcVaFnPvDDr----yFiSGSLD--------------~ 432 (712)
T KOG0283|consen 374 DLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKV--FSHNDFVTCVAFNPVDDR----YFISGSLD--------------G 432 (712)
T ss_pred ecccccC-CeeEeccccccEEeecCCCcceeeE--EecCCeeEEEEecccCCC----cEeecccc--------------c
Confidence 3445443 2333334456788888876654444 344556889999996665 33333222 2
Q ss_pred eEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 225 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
.+-++++ ...++.--+.-..-+....|+|||+..+..+..
T Consensus 433 KvRiWsI-----------------~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~ 472 (712)
T KOG0283|consen 433 KVRLWSI-----------------SDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFN 472 (712)
T ss_pred ceEEeec-----------------CcCeeEeehhhhhhheeEEeccCCceEEEEEec
Confidence 3333343 234444444444568889999999988766655
No 295
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=97.62 E-value=8.3e-05 Score=49.15 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=28.4
Q ss_pred eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEe
Q 005093 254 VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 297 (715)
Q Consensus 254 ~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~ 297 (715)
++++........|.|||||++|+|++++.. .+..+||+
T Consensus 2 ~~~t~~~~~~~~p~~SpDGk~i~f~s~~~~------~g~~diy~ 39 (39)
T PF07676_consen 2 KQLTNSPGDDGSPAWSPDGKYIYFTSNRND------RGSFDIYV 39 (39)
T ss_dssp EEES-SSSSEEEEEE-TTSSEEEEEEECT--------SSEEEEE
T ss_pred cCcccCCccccCEEEecCCCEEEEEecCCC------CCCcCEEC
Confidence 567888888999999999999999999852 24556774
No 296
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.60 E-value=0.014 Score=59.83 Aligned_cols=158 Identities=15% Similarity=0.246 Sum_probs=93.2
Q ss_pred ccceEEeeCCCC--ceEEEEecCCCCCCeEEEEe---cCCccEEEEec-CccccccccCCCcccceeecCCCCeEEEEee
Q 005093 43 TGASAVVPSPSG--SKLLVVRNPENESPIQFELW---SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 43 ~~~~~~~~Spdg--~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
.+++...|||-| ..|||..-..++++-...++ .+......+-. ..+. .+.|.+.|++|.+...
T Consensus 174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~-----------qLkW~~~g~~ll~l~~ 242 (561)
T COG5354 174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGV-----------QLKWQVLGKYLLVLVM 242 (561)
T ss_pred cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeeccc-----------EEEEecCCceEEEEEE
Confidence 568889999974 44666544333444333444 22221111111 1222 7899999999999877
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
........+. |+ .+||++++.....+.. ..-...+.++.|+|+++
T Consensus 243 t~~ksnKsyf--------------------------ge-------snLyl~~~~e~~i~V~--~~~~~pVhdf~W~p~S~ 287 (561)
T COG5354 243 THTKSNKSYF--------------------------GE-------SNLYLLRITERSIPVE--KDLKDPVHDFTWEPLSS 287 (561)
T ss_pred Eeeeccccee--------------------------cc-------ceEEEEeeccccccee--ccccccceeeeecccCC
Confidence 6542211110 22 7899999974443333 12234678999999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
+ ++..... -+..+-.+|+ .+.-...+ ++..-..+.|||.+++++
T Consensus 288 ~----F~vi~g~-------------~pa~~s~~~l-----------------r~Nl~~~~--Pe~~rNT~~fsp~~r~il 331 (561)
T COG5354 288 R----FAVISGY-------------MPASVSVFDL-----------------RGNLRFYF--PEQKRNTIFFSPHERYIL 331 (561)
T ss_pred c----eeEEecc-------------cccceeeccc-----------------ccceEEec--CCcccccccccCcccEEE
Confidence 9 7766521 1124556665 34422222 333445689999999999
Q ss_pred EEecCC
Q 005093 277 FLSAKS 282 (715)
Q Consensus 277 ~~~~~~ 282 (715)
+..-..
T Consensus 332 ~agF~n 337 (561)
T COG5354 332 FAGFDN 337 (561)
T ss_pred EecCCc
Confidence 987664
No 297
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=97.58 E-value=0.0027 Score=58.83 Aligned_cols=171 Identities=15% Similarity=0.196 Sum_probs=107.4
Q ss_pred ccccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCcc
Q 005093 2 FSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQL 79 (715)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~ 79 (715)
|+-....+.+.....-+.++|++....++.-+...+ +++....|--..+.|+-..+. . -..+| .+|..
T Consensus 108 f~~ds~~lltgg~ekllrvfdln~p~App~E~~ght-----g~Ir~v~wc~eD~~iLSSadd--~---tVRLWD~rTgt~ 177 (334)
T KOG0278|consen 108 FSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHT-----GGIRTVLWCHEDKCILSSADD--K---TVRLWDHRTGTE 177 (334)
T ss_pred ecccchhhhccchHHHhhhhhccCCCCCchhhcCCC-----CcceeEEEeccCceEEeeccC--C---ceEEEEeccCcE
Confidence 334445555666666677778888877666555555 889999996666666543222 2 24455 55666
Q ss_pred EEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCc
Q 005093 80 EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK 159 (715)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 159 (715)
.+.++....+ +++-.|+||+.|-.. .
T Consensus 178 v~sL~~~s~V----------tSlEvs~dG~ilTia-~------------------------------------------- 203 (334)
T KOG0278|consen 178 VQSLEFNSPV----------TSLEVSQDGRILTIA-Y------------------------------------------- 203 (334)
T ss_pred EEEEecCCCC----------cceeeccCCCEEEEe-c-------------------------------------------
Confidence 6666666665 799999999977553 1
Q ss_pred cCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
...|-.||.++=.+..- -.-...+.+++.+|+-. ++..+. ....+|.+|.
T Consensus 204 -gssV~Fwdaksf~~lKs--~k~P~nV~SASL~P~k~-----~fVaGg--------------ed~~~~kfDy-------- 253 (334)
T KOG0278|consen 204 -GSSVKFWDAKSFGLLKS--YKMPCNVESASLHPKKE-----FFVAGG--------------EDFKVYKFDY-------- 253 (334)
T ss_pred -CceeEEeccccccceee--ccCccccccccccCCCc-----eEEecC--------------cceEEEEEec--------
Confidence 14466677654332221 22234566788999874 444442 2236888887
Q ss_pred hhhhhccCCCCCCceec--CCCCccccceeEcCCCCeE
Q 005093 240 ELELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 240 ~~~~~~~~~~~~~~~~l--t~~~~~~~~~~~spdg~~l 275 (715)
.+++..-. ..+.+.+..++|||||..-
T Consensus 254 ---------~TgeEi~~~nkgh~gpVhcVrFSPdGE~y 282 (334)
T KOG0278|consen 254 ---------NTGEEIGSYNKGHFGPVHCVRFSPDGELY 282 (334)
T ss_pred ---------cCCceeeecccCCCCceEEEEECCCCcee
Confidence 66655444 4556778899999999743
No 298
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=97.58 E-value=0.00012 Score=48.47 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=25.3
Q ss_pred cccccCCCccccccceEEeeCCCCceEEEEecCCC-CCCeEE
Q 005093 31 VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-ESPIQF 71 (715)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~-~~~~~~ 71 (715)
.|+|..+ +....|+|||||++|+|++++++ +..+||
T Consensus 2 ~~~t~~~-----~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 2 KQLTNSP-----GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp EEES-SS-----SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCcccCC-----ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3566666 67899999999999999998762 344454
No 299
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=97.58 E-value=0.00027 Score=72.19 Aligned_cols=135 Identities=11% Similarity=0.169 Sum_probs=74.4
Q ss_pred cccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEE-EecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 40 VEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKE-FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 40 ~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
++.+.+..-+|||||.-|+-..++ .+..|| ..|-.+.. .+....+ ...+|.|+...++|....
T Consensus 102 AH~~A~~~gRW~~dGtgLlt~GED-----G~iKiWSrsGMLRStl~Q~~~~v----------~c~~W~p~S~~vl~c~g~ 166 (737)
T KOG1524|consen 102 AHAAAISSGRWSPDGAGLLTAGED-----GVIKIWSRSGMLRSTVVQNEESI----------RCARWAPNSNSIVFCQGG 166 (737)
T ss_pred hhhhhhhhcccCCCCceeeeecCC-----ceEEEEeccchHHHHHhhcCcee----------EEEEECCCCCceEEecCC
Confidence 344667888999999988766443 478899 67765432 2322333 799999999999997543
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spd 194 (715)
.-.- -++........|.......-...|.+...-...+......-+||..+..+..- .+.++.+.+++|.||
T Consensus 167 h~~I---KpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S--~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 167 HISI---KPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTS--AAEEYAITSVAFNPE 238 (737)
T ss_pred eEEE---eecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccC--Chhccceeeeeeccc
Confidence 2110 01111222222333222221222222211111111235667787766554433 566778888999998
No 300
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.55 E-value=0.0029 Score=57.73 Aligned_cols=108 Identities=20% Similarity=0.251 Sum_probs=76.2
Q ss_pred CcEEEEEcCCCCCC-CCccchHHHHHHHhCCcEEEEEcCCCCCC-CchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 481 DPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLG-FGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 481 ~P~vv~iHGg~~~~-~~~~~~~~~~~la~~G~~vi~~d~rG~~~-~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
.-.|||+-|-+..- .......+..+|.+.++..+.+..+.+.. ||... -..+.+|+..+++++...+.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s--------lk~D~edl~~l~~Hi~~~~f-- 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS--------LKDDVEDLKCLLEHIQLCGF-- 105 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccc--------ccccHHHHHHHHHHhhccCc--
Confidence 35677776622221 12233456778899999999999886432 54432 12358889999998776643
Q ss_pred CceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCcchhh
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCNLA 598 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~~~~ 598 (715)
.+.|+++|||-|..-.+++++. .+..+.++|+.+|+.|..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 3589999999999998888743 355789999999998865
No 301
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=97.54 E-value=0.0021 Score=65.37 Aligned_cols=227 Identities=12% Similarity=0.091 Sum_probs=131.0
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
+-+.++|-.-+++ |+ .+++...+|.+...|....+.+++-... +..+.....+|||+.|+..
T Consensus 422 VcAvtIS~~trhV-yT--gGkgcVKVWdis~pg~k~PvsqLdcl~r-----dnyiRSckL~pdgrtLivG---------- 483 (705)
T KOG0639|consen 422 VCAVTISNPTRHV-YT--GGKGCVKVWDISQPGNKSPVSQLDCLNR-----DNYIRSCKLLPDGRTLIVG---------- 483 (705)
T ss_pred EEEEEecCCccee-Ee--cCCCeEEEeeccCCCCCCccccccccCc-----ccceeeeEecCCCceEEec----------
Confidence 4456667666654 33 1123333333332333344444433221 1234788999999999884
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC-CCCCCccceEEEecCCCCCccEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
|+ ...|-+|||....++.-.. +........++.|||.+ +.
T Consensus 484 ----------------------------Ge------astlsiWDLAapTprikaeltssapaCyALa~spDak-----vc 524 (705)
T KOG0639|consen 484 ----------------------------GE------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAK-----VC 524 (705)
T ss_pred ----------------------------cc------cceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccc-----ee
Confidence 22 2678999998776543210 22223455778999998 88
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCC
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 283 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~ 283 (715)
|+.-.++ .|.++|| .+-..++++.........+..|+||.+| |+...+
T Consensus 525 FsccsdG--------------nI~vwDL----------------hnq~~VrqfqGhtDGascIdis~dGtkl-WTGGlD- 572 (705)
T KOG0639|consen 525 FSCCSDG--------------NIAVWDL----------------HNQTLVRQFQGHTDGASCIDISKDGTKL-WTGGLD- 572 (705)
T ss_pred eeeccCC--------------cEEEEEc----------------ccceeeecccCCCCCceeEEecCCCcee-ecCCCc-
Confidence 8873322 4666776 1334566777777778889999999988 444332
Q ss_pred CCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 284 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 284 ~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
..|.-+|+..+.. +... + +...+..+...|.+..+++. ... ..++.+.
T Consensus 573 ---------ntvRcWDlregrq--lqqh--------------d----F~SQIfSLg~cP~~dWlavG-Men--s~vevlh 620 (705)
T KOG0639|consen 573 ---------NTVRCWDLREGRQ--LQQH--------------D----FSSQIFSLGYCPTGDWLAVG-MEN--SNVEVLH 620 (705)
T ss_pred ---------cceeehhhhhhhh--hhhh--------------h----hhhhheecccCCCccceeee-ccc--CcEEEEe
Confidence 2356667665432 1110 0 11235566778888866553 323 3566666
Q ss_pred CCCCcEEEecCCCCCceeEEEeecCCEEE
Q 005093 364 VSSGELLRITPAESNFSWSLLTLDGDNII 392 (715)
Q Consensus 364 ~~tg~~~~l~~~~~~~~~~~~s~~~~~l~ 392 (715)
....+..+|.....-+-..-|+..|.+++
T Consensus 621 ~skp~kyqlhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639|consen 621 TSKPEKYQLHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred cCCccceeecccccEEEEEEecccCceee
Confidence 65566666766555222245677777654
No 302
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.52 E-value=0.011 Score=66.60 Aligned_cols=225 Identities=16% Similarity=0.226 Sum_probs=124.0
Q ss_pred ccceEEeeCCCCceEEEEecC-C----CCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 43 TGASAVVPSPSGSKLLVVRNP-E----NESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
.....+..+|+|..++|+... + .....+|.. + ++..+........ ..+.|||||+.++|....
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-d-~~~~~~~~~~~~~----------~~~~~spdg~~~~~~~~~ 80 (620)
T COG1506 13 ARVSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVS-D-GKTVRLLTFGGGV----------SELRWSPDGSVLAFVSTD 80 (620)
T ss_pred hcccCcccCCCCceeEEeeccccccccccccceEEE-e-cccccccccCCcc----------cccccCCCCCEEEEEecc
Confidence 446778999999999999874 1 122233332 2 2212222112222 689999999999998622
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
. . ...++|+++.+ | .+ ......+....|+|+|+.
T Consensus 81 ~-----------------------------------~-----~~~~l~l~~~~-g---~~--~~~~~~v~~~~~~~~g~~ 114 (620)
T COG1506 81 G-----------------------------------G-----RVAQLYLVDVG-G---LI--TKTAFGVSDARWSPDGDR 114 (620)
T ss_pred C-----------------------------------C-----CcceEEEEecC-C---ce--eeeecccccceeCCCCCe
Confidence 1 1 13779999987 4 22 233345678899999999
Q ss_pred CccEEEEEeecCccceeee---------ee-ee-c-CCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccc
Q 005093 198 LHQYLVFVGWSSETRKLGI---------KY-CY-N-RPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFF 265 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~---------~~-~~-~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~ 265 (715)
+++........+.+. .+ .. . ...++|++|. .+ ....+.........
T Consensus 115 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~-----------------~~-~~~~~~~~~~~~~~ 172 (620)
T COG1506 115 ----IAFLTAEGASKRDGGDHLFVDRLPVWFDGRGGERSDLYVVDI-----------------ES-KLIKLGLGNLDVVS 172 (620)
T ss_pred ----EEEEecccccccCCceeeeecccceeecCCCCcccceEEEcc-----------------Cc-ccccccCCCCceee
Confidence 998432221112221 01 00 1 3456777874 33 44455555556677
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCC
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 345 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~ 345 (715)
++++++++.++......... .....+++....++....++.+.. +...+.|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~gk 228 (620)
T COG1506 173 FATDGDGRLVASIRLDDDAD----PWVTNLYVLIEGNGELESLTPGEG--------------------SISKLAFDADGK 228 (620)
T ss_pred eeeCCCCceeEEeeeccccC----CceEeeEEEecCCCceEEEcCCCc--------------------eeeeeeeCCCCC
Confidence 77777788777666554211 111223333333434333332221 234556888888
Q ss_pred EEEEEeeeCC-----eeEEEEEECCCCcEEE
Q 005093 346 TMLLSSIWGS-----SQVIISVNVSSGELLR 371 (715)
Q Consensus 346 ~l~~~~~~~~-----~~~l~~~d~~tg~~~~ 371 (715)
.+.+...... ...++.++...++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (620)
T COG1506 229 SIALLGTESDRGLAEGDFILLLDGELGEVDG 259 (620)
T ss_pred eeEEeccCCccCccccceEEEEeccccccce
Confidence 7776665332 2245555544455444
No 303
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.51 E-value=0.017 Score=55.66 Aligned_cols=178 Identities=14% Similarity=0.175 Sum_probs=105.4
Q ss_pred ccccccceEEEEEEEeecCC---CCccccccCC---CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEE
Q 005093 8 NLLANKRKKFMLSTVISKEN---ENSVTFQWAP---FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEK 81 (715)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~ 81 (715)
.|-...|...||-+++.-+. ..+.+.|-.| +.++.+.+.+.+. +|.++|-.+++ +.-.+|.+....+...
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssD--etI~IYDm~k~~qlg~ 78 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGSSD--ETIHIYDMRKRKQLGI 78 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccCCC--CcEEEEeccchhhhcc
Confidence 45566788889987776443 2334554444 3345666777776 67777755444 3333444444444444
Q ss_pred EEecCccccccccCCCcccceeecCCCC--eEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCc
Q 005093 82 EFHVPQTVHGSVYADGWFEGISWNSDET--LIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK 159 (715)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~wSpDg~--~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 159 (715)
+......+ +.+.|+++-. +|+-.++
T Consensus 79 ll~Hagsi----------taL~F~~~~S~shLlS~sd------------------------------------------- 105 (362)
T KOG0294|consen 79 LLSHAGSI----------TALKFYPPLSKSHLLSGSD------------------------------------------- 105 (362)
T ss_pred eeccccce----------EEEEecCCcchhheeeecC-------------------------------------------
Confidence 55443333 7888888765 5544332
Q ss_pred cCceEEEEEccCCc-eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 160 RQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 160 ~~~~l~~~~~~~g~-~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
..+|.+|+...=+ +..+. +....+..++..|.|+ |+.+.. ++..|-.+||
T Consensus 106 -DG~i~iw~~~~W~~~~slK--~H~~~Vt~lsiHPS~K-----LALsVg--------------~D~~lr~WNL------- 156 (362)
T KOG0294|consen 106 -DGHIIIWRVGSWELLKSLK--AHKGQVTDLSIHPSGK-----LALSVG--------------GDQVLRTWNL------- 156 (362)
T ss_pred -CCcEEEEEcCCeEEeeeec--ccccccceeEecCCCc-----eEEEEc--------------CCceeeeehh-------
Confidence 2567888764321 12221 2223488899999998 676653 2335666776
Q ss_pred hhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 239 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
-.|....+.+-......+.|+|.|.+++....+
T Consensus 157 ----------V~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~ 189 (362)
T KOG0294|consen 157 ----------VRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN 189 (362)
T ss_pred ----------hcCccceeeccCCcceeeEEcCCCCEEEEEecc
Confidence 445554444444455669999999987766544
No 304
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.51 E-value=0.0057 Score=58.73 Aligned_cols=185 Identities=10% Similarity=0.070 Sum_probs=106.1
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
....||+-|.+||..... ..|.+||+.|-..-++-
T Consensus 27 ~~~~Fs~~G~~lAvGc~n--------------------------------------------G~vvI~D~~T~~iar~l- 61 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCAN--------------------------------------------GRVVIYDFDTFRIARML- 61 (405)
T ss_pred ceEEeccCcceeeeeccC--------------------------------------------CcEEEEEccccchhhhh-
Confidence 588999999999986432 55889999886654441
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 259 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 259 (715)
+..-.++..++||+||+. |+.++ ++..|-.+|+ ..|....-..-
T Consensus 62 saH~~pi~sl~WS~dgr~----LltsS---------------~D~si~lwDl-----------------~~gs~l~rirf 105 (405)
T KOG1273|consen 62 SAHVRPITSLCWSRDGRK----LLTSS---------------RDWSIKLWDL-----------------LKGSPLKRIRF 105 (405)
T ss_pred hccccceeEEEecCCCCE----eeeec---------------CCceeEEEec-----------------cCCCceeEEEc
Confidence 344457889999999998 88765 4446777887 33333221112
Q ss_pred CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCc
Q 005093 260 ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 339 (715)
Q Consensus 260 ~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 339 (715)
+..+....|.|-.+..+.+...+. +-++++++....+.|....+. +.. .+.....
T Consensus 106 ~spv~~~q~hp~k~n~~va~~~~~----------sp~vi~~s~~~h~~Lp~d~d~-----------dln----~sas~~~ 160 (405)
T KOG1273|consen 106 DSPVWGAQWHPRKRNKCVATIMEE----------SPVVIDFSDPKHSVLPKDDDG-----------DLN----SSASHGV 160 (405)
T ss_pred cCccceeeeccccCCeEEEEEecC----------CcEEEEecCCceeeccCCCcc-----------ccc----ccccccc
Confidence 334666778887666655554431 135556655444444332211 110 0112235
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCcEE---EecCCCCCceeEEEeecCCEEEEE
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVSSGELL---RITPAESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~---~l~~~~~~~~~~~~s~~~~~l~~~ 394 (715)
|.+.|++|+.. ...| .|..+|..|-+.. +++... .+-...++..|+.+++-
T Consensus 161 fdr~g~yIitG-tsKG--kllv~~a~t~e~vas~rits~~-~IK~I~~s~~g~~liiN 214 (405)
T KOG1273|consen 161 FDRRGKYIITG-TSKG--KLLVYDAETLECVASFRITSVQ-AIKQIIVSRKGRFLIIN 214 (405)
T ss_pred ccCCCCEEEEe-cCcc--eEEEEecchheeeeeeeechhe-eeeEEEEeccCcEEEEe
Confidence 78889876543 3333 4555566555433 233311 12335677777766653
No 305
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.50 E-value=0.013 Score=54.91 Aligned_cols=129 Identities=14% Similarity=0.169 Sum_probs=65.1
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHH-hCC--cEEEEEcCCCCCCCchhhhhcCCC-CCC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS-SVG--YSLLIVNYRGSLGFGEEALQSLPG-KVG 537 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la-~~G--~~vi~~d~rG~~~~g~~~~~~~~~-~~~ 537 (715)
|.+++-..+.|--.......|.|+++.|.|+.. ..|...+..|- ..+ ..+..+-.-|...-..+-.+.... +-.
T Consensus 10 gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e 87 (301)
T KOG3975|consen 10 GLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEE 87 (301)
T ss_pred CCcccceeeeeeeccCCCCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCccccccccccccc
Confidence 344444444443223457789999999987663 23444444332 222 335555443321111000000000 001
Q ss_pred ccchh-hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC--ceeEEEecCC
Q 005093 538 SQDVN-DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNP 593 (715)
Q Consensus 538 ~~~~~-d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~ 593 (715)
....+ .+..-++++.+.- ....||.++|||-|+++.+.++..... .+..+++.-|
T Consensus 88 ifsL~~QV~HKlaFik~~~-Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYV-PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred ccchhhHHHHHHHHHHHhC-CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 11233 3344566665542 345799999999999999998864332 2344444444
No 306
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.50 E-value=0.035 Score=54.75 Aligned_cols=213 Identities=14% Similarity=0.074 Sum_probs=115.0
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecC-cccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGS 92 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~ 92 (715)
-..++++|..++.. ..+++..+ .-.+ ...-.|||||++|+-+.+.-.....+.-+| .....+++-+.+ .++
T Consensus 27 G~~~~v~D~~~g~~-~~~~~a~~-gRHF--yGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GI--- 99 (305)
T PF07433_consen 27 GTFALVFDCRTGQL-LQRLWAPP-GRHF--YGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGI--- 99 (305)
T ss_pred CcEEEEEEcCCCce-eeEEcCCC-CCEE--ecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCc---
Confidence 34556666655442 22332222 1111 346799999998855544333445566666 333444443332 222
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
....+.|.|||+.|+..--.-... + ..+. .+...+...++|..+|..+|
T Consensus 100 -----GPHel~l~pDG~tLvVANGGI~Th-p-------d~GR------------------~kLNl~tM~psL~~ld~~sG 148 (305)
T PF07433_consen 100 -----GPHELLLMPDGETLVVANGGIETH-P-------DSGR------------------AKLNLDTMQPSLVYLDARSG 148 (305)
T ss_pred -----ChhhEEEcCCCCEEEEEcCCCccC-c-------ccCc------------------eecChhhcCCceEEEecCCC
Confidence 114888999999887752110000 0 0000 01112234588999999999
Q ss_pred ceE-e--ecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 173 EVQ-A--VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 173 ~~~-~--l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
++. + +.......++..+++++||. ++|.....++.. ....=|...+ .
T Consensus 149 ~ll~q~~Lp~~~~~lSiRHLa~~~~G~-----V~~a~Q~qg~~~-------~~~PLva~~~------------------~ 198 (305)
T PF07433_consen 149 ALLEQVELPPDLHQLSIRHLAVDGDGT-----VAFAMQYQGDPG-------DAPPLVALHR------------------R 198 (305)
T ss_pred ceeeeeecCccccccceeeEEecCCCc-----EEEEEecCCCCC-------ccCCeEEEEc------------------C
Confidence 854 3 21112344788999999997 555543332211 1112233443 2
Q ss_pred CCCceecCC-------CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 250 DLPVVNLTE-------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 250 ~~~~~~lt~-------~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
++..+.+.- -.+++.++++++||..++.++.+. ..+.++|..++..
T Consensus 199 g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG----------g~~~~~d~~tg~~ 251 (305)
T PF07433_consen 199 GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG----------GRVAVWDAATGRL 251 (305)
T ss_pred CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC----------CEEEEEECCCCCE
Confidence 333333322 234689999999999999888773 2466778777664
No 307
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.49 E-value=0.0012 Score=71.02 Aligned_cols=131 Identities=16% Similarity=0.167 Sum_probs=76.8
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-------------H---HHHHHHhCCcEEEEEcCC-CCCCC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-------------K---SLAFLSSVGYSLLIVNYR-GSLGF 524 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~-------------~---~~~~la~~G~~vi~~d~r-G~~~~ 524 (715)
+..+.-|++...+ .....|+||+++|||+........ . ..-.+.+. ..++.+|.+ |. |+
T Consensus 60 ~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~-G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGV-GF 135 (462)
T ss_pred CceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCc-Cc
Confidence 4567777777653 456789999999998764321000 0 00012222 467777864 52 23
Q ss_pred chhhhhcCCCCCCccchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhC----------CCceeEEEecCC
Q 005093 525 GEEALQSLPGKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQA----------PDKFVAAAARNP 593 (715)
Q Consensus 525 g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~----------p~~~~~~v~~~~ 593 (715)
+....... ........+|+.+++..+.++ +.....++.|+|+||||..+..+|.+- .-.++++++..|
T Consensus 136 S~~~~~~~-~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 136 SYADKADY-DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred ccCCCCCC-CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 32211100 111122356777777655543 334568999999999999887776542 114789999888
Q ss_pred cchh
Q 005093 594 LCNL 597 (715)
Q Consensus 594 ~~~~ 597 (715)
+.+.
T Consensus 215 ~~dp 218 (462)
T PTZ00472 215 LTDP 218 (462)
T ss_pred ccCh
Confidence 7764
No 308
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.48 E-value=0.062 Score=56.61 Aligned_cols=187 Identities=12% Similarity=0.053 Sum_probs=111.9
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..+.++|.++.....- .........++++||++. ++... .. +....++.+|-
T Consensus 96 ~~v~vid~~~~~~~~~--~~vG~~P~~~~~~~~~~~----vYV~n-~~-----------~~~~~vsvid~---------- 147 (381)
T COG3391 96 NTVSVIDTATNTVLGS--IPVGLGPVGLAVDPDGKY----VYVAN-AG-----------NGNNTVSVIDA---------- 147 (381)
T ss_pred CeEEEEcCcccceeeE--eeeccCCceEEECCCCCE----EEEEe-cc-----------cCCceEEEEeC----------
Confidence 6688888666554433 222335668899999997 55543 21 02357888885
Q ss_pred hhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceec
Q 005093 242 ELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC 321 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~ 321 (715)
+++...............+++|+|++++-+...+ ..|.++|.++....+ .... ..+
T Consensus 148 -------~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~----------~~v~vi~~~~~~v~~-~~~~-~~~----- 203 (381)
T COG3391 148 -------ATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDD----------NTVSVIDTSGNSVVR-GSVG-SLV----- 203 (381)
T ss_pred -------CCCeEEEEEecCCCcceEEECCCCCeEEEEecCC----------CeEEEEeCCCcceec-cccc-ccc-----
Confidence 4444433321111237789999999886665332 358888866544322 1100 000
Q ss_pred CCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--CceeEEEeecCCEEEEEEeCCC
Q 005093 322 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSSPV 399 (715)
Q Consensus 322 ~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--~~~~~~~s~~~~~l~~~~~~~~ 399 (715)
..+ .......+++||+.+|..-.......+..+|..++.........+ ......++++|..++.....
T Consensus 204 ---~~~-----~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~-- 273 (381)
T COG3391 204 ---GVG-----TGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ-- 273 (381)
T ss_pred ---ccC-----CCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecC--
Confidence 000 134567789999988776655545789999999988887622222 12235678888877766544
Q ss_pred CCCeEEEEeecc
Q 005093 400 DVPQVKYGYFVD 411 (715)
Q Consensus 400 ~p~~l~~~~~~~ 411 (715)
...++.++..+
T Consensus 274 -~~~V~vid~~~ 284 (381)
T COG3391 274 -GGTVSVIDGAT 284 (381)
T ss_pred -CCeEEEEeCCC
Confidence 56677777543
No 309
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=97.46 E-value=0.00095 Score=66.22 Aligned_cols=261 Identities=11% Similarity=0.024 Sum_probs=132.0
Q ss_pred cccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCcccc
Q 005093 11 ANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVH 90 (715)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (715)
+......|.++++..+..+.. +.+....|.+....+-++++++.-..++ ...++|.+........++- ..
T Consensus 192 tgg~Dr~Ik~W~v~~~k~~~~----~tLaGs~g~it~~d~d~~~~~~iAas~d--~~~r~Wnvd~~r~~~TLsG----Ht 261 (459)
T KOG0288|consen 192 TGGSDRIIKLWNVLGEKSELI----STLAGSLGNITSIDFDSDNKHVIAASND--KNLRLWNVDSLRLRHTLSG----HT 261 (459)
T ss_pred hcchhhhhhhhhcccchhhhh----hhhhccCCCcceeeecCCCceEEeecCC--Cceeeeeccchhhhhhhcc----cc
Confidence 334444455555655542111 2233344778999999999887644333 4455666543222222221 11
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
++| ....|.-+...+.-.+.+... +.|.+......+. ....+.-+++...+. .-..+.-...|..||..
T Consensus 262 dkV------t~ak~~~~~~~vVsgs~DRti--K~WDl~k~~C~kt-~l~~S~cnDI~~~~~--~~~SgH~DkkvRfwD~R 330 (459)
T KOG0288|consen 262 DKV------TAAKFKLSHSRVVSGSADRTI--KLWDLQKAYCSKT-VLPGSQCNDIVCSIS--DVISGHFDKKVRFWDIR 330 (459)
T ss_pred cce------eeehhhccccceeeccccchh--hhhhhhhhheecc-ccccccccceEecce--eeeecccccceEEEecc
Confidence 222 455565555442222222211 1222211100000 000111111111000 00111123458999987
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
++..+.. .+....+.++..++||.. |+.++ ++..+-++|+ .+
T Consensus 331 s~~~~~s--v~~gg~vtSl~ls~~g~~----lLsss---------------RDdtl~viDl-----------------Rt 372 (459)
T KOG0288|consen 331 SADKTRS--VPLGGRVTSLDLSMDGLE----LLSSS---------------RDDTLKVIDL-----------------RT 372 (459)
T ss_pred CCceeeE--eecCcceeeEeeccCCeE----Eeeec---------------CCCceeeeec-----------------cc
Confidence 7766555 355557889999999999 77664 3335667776 55
Q ss_pred CCceecCCCCc-----cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-CcccceeeeeeceecCCC
Q 005093 251 LPVVNLTESIS-----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVVQCAEG 324 (715)
Q Consensus 251 ~~~~~lt~~~~-----~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~ 324 (715)
.+++....-.+ ......|||||.+++-.+.+ ..||++++.+++.. .+.....
T Consensus 373 ~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~d-----------gsv~iW~v~tgKlE~~l~~s~s----------- 430 (459)
T KOG0288|consen 373 KEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSAD-----------GSVYIWSVFTGKLEKVLSLSTS----------- 430 (459)
T ss_pred ccEEEEeeccccccccccceeEECCCCceeeeccCC-----------CcEEEEEccCceEEEEeccCCC-----------
Confidence 55554433222 24668999999999865555 35999999887652 2211110
Q ss_pred CCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 325 DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 325 ~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
.+ .+..+.|.+.|+.++- ...+....||
T Consensus 431 --~~-----aI~s~~W~~sG~~Lls-adk~~~v~lW 458 (459)
T KOG0288|consen 431 --NA-----AITSLSWNPSGSGLLS-ADKQKAVTLW 458 (459)
T ss_pred --Cc-----ceEEEEEcCCCchhhc-ccCCcceEec
Confidence 00 2456779888876543 3333334444
No 310
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.45 E-value=0.001 Score=64.89 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=65.7
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCCCCCce
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLANPSK 561 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~d~~~ 561 (715)
.|+++|++++. ...|..+++.+...++.|+.++++|... . ......++++++. ++.+.+.. ...+
T Consensus 2 ~lf~~p~~gG~--~~~y~~la~~l~~~~~~v~~i~~~~~~~---~-------~~~~~si~~la~~y~~~I~~~~--~~gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGS--ASSYRPLARALPDDVIGVYGIEYPGRGD---D-------EPPPDSIEELASRYAEAIRARQ--PEGP 67 (229)
T ss_dssp EEEEESSTTCS--GGGGHHHHHHHTTTEEEEEEECSTTSCT---T-------SHEESSHHHHHHHHHHHHHHHT--SSSS
T ss_pred eEEEEcCCccC--HHHHHHHHHhCCCCeEEEEEEecCCCCC---C-------CCCCCCHHHHHHHHHHHhhhhC--CCCC
Confidence 58899997664 5678888888866578999999998431 0 1112235555543 34444432 2348
Q ss_pred EEEEEeChhHHHHHHHHhhC---CCceeEEEecCCc
Q 005093 562 VTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPL 594 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~ 594 (715)
+.|+|||+||.+|..+|.+. ...+..++++.+.
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred eeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 99999999999999888643 3457777777743
No 311
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=97.41 E-value=0.054 Score=54.58 Aligned_cols=124 Identities=13% Similarity=0.087 Sum_probs=80.3
Q ss_pred CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCcc
Q 005093 183 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISS 262 (715)
Q Consensus 183 ~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~ 262 (715)
+......+|.||| ++|.... .++.|-.+|+. ......+...+.+.
T Consensus 347 ~v~~ts~~fHpDg------Lifgtgt-------------~d~~vkiwdlk----------------s~~~~a~Fpght~~ 391 (506)
T KOG0289|consen 347 DVEYTSAAFHPDG------LIFGTGT-------------PDGVVKIWDLK----------------SQTNVAKFPGHTGP 391 (506)
T ss_pred cceeEEeeEcCCc------eEEeccC-------------CCceEEEEEcC----------------CccccccCCCCCCc
Confidence 3567788999999 5565522 22356666761 33355566667778
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-CCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
+..+.||.+|=+|+...++. .+..+||..-+. +.++... +. .+..+.|.
T Consensus 392 vk~i~FsENGY~Lat~add~-----------~V~lwDLRKl~n~kt~~l~~--------------~~-----~v~s~~fD 441 (506)
T KOG0289|consen 392 VKAISFSENGYWLATAADDG-----------SVKLWDLRKLKNFKTIQLDE--------------KK-----EVNSLSFD 441 (506)
T ss_pred eeEEEeccCceEEEEEecCC-----------eEEEEEehhhcccceeeccc--------------cc-----cceeEEEc
Confidence 99999999999999887663 277888865432 1111110 00 24566788
Q ss_pred cCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
..|+++... +....+|..+-.++..+.+..
T Consensus 442 ~SGt~L~~~---g~~l~Vy~~~k~~k~W~~~~~ 471 (506)
T KOG0289|consen 442 QSGTYLGIA---GSDLQVYICKKKTKSWTEIKE 471 (506)
T ss_pred CCCCeEEee---cceeEEEEEecccccceeeeh
Confidence 888866554 445678888877777776643
No 312
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=97.40 E-value=0.002 Score=65.44 Aligned_cols=171 Identities=11% Similarity=0.046 Sum_probs=104.6
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (715)
+-+.+-++|++......+ ..++..--...+.+.|||.+ |+|..-.+ ++-.+|.+.+....+++--.+.+.
T Consensus 485 eastlsiWDLAapTprik----aeltssapaCyALa~spDak-vcFsccsd-GnI~vwDLhnq~~VrqfqGhtDGa---- 554 (705)
T KOG0639|consen 485 EASTLSIWDLAAPTPRIK----AELTSSAPACYALAISPDAK-VCFSCCSD-GNIAVWDLHNQTLVRQFQGHTDGA---- 554 (705)
T ss_pred ccceeeeeeccCCCcchh----hhcCCcchhhhhhhcCCccc-eeeeeccC-CcEEEEEcccceeeecccCCCCCc----
Confidence 344555555766654332 12222113467788999986 66665443 332333332222222222223344
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
+.+..|+||.+|.-.. -.+.|.-||+..|.
T Consensus 555 ------scIdis~dGtklWTGG--------------------------------------------lDntvRcWDlregr 584 (705)
T KOG0639|consen 555 ------SCIDISKDGTKLWTGG--------------------------------------------LDNTVRCWDLREGR 584 (705)
T ss_pred ------eeEEecCCCceeecCC--------------------------------------------Cccceeehhhhhhh
Confidence 7899999999987631 23678889997765
Q ss_pred eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc
Q 005093 174 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 253 (715)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (715)
..+- ......+.++...|.|.. ++.-- .+++++++.. .+.+.
T Consensus 585 qlqq--hdF~SQIfSLg~cP~~dW----lavGM---------------ens~vevlh~-----------------skp~k 626 (705)
T KOG0639|consen 585 QLQQ--HDFSSQIFSLGYCPTGDW----LAVGM---------------ENSNVEVLHT-----------------SKPEK 626 (705)
T ss_pred hhhh--hhhhhhheecccCCCccc----eeeec---------------ccCcEEEEec-----------------CCccc
Confidence 4332 233345667778899998 76543 3357888875 45556
Q ss_pred eecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 254 VNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 254 ~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
-+|.-.+.-+-+..|++-|++++-+..++
T Consensus 627 yqlhlheScVLSlKFa~cGkwfvStGkDn 655 (705)
T KOG0639|consen 627 YQLHLHESCVLSLKFAYCGKWFVSTGKDN 655 (705)
T ss_pred eeecccccEEEEEEecccCceeeecCchh
Confidence 67887788889999999999987666553
No 313
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.35 E-value=0.042 Score=64.15 Aligned_cols=88 Identities=13% Similarity=0.123 Sum_probs=52.0
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
+..|.+|+.+ |++.... .+.+.-...++|.|.|.. |+-+....+ ..+|..+.- ++
T Consensus 236 ~R~iRVy~Re-G~L~stS-E~v~gLe~~l~WrPsG~l----IA~~q~~~~------------~~~VvFfEr-------NG 290 (928)
T PF04762_consen 236 RRVIRVYSRE-GELQSTS-EPVDGLEGALSWRPSGNL----IASSQRLPD------------RHDVVFFER-------NG 290 (928)
T ss_pred eeEEEEECCC-ceEEecc-ccCCCccCCccCCCCCCE----EEEEEEcCC------------CcEEEEEec-------CC
Confidence 4778899987 6655541 122234557899999997 777763111 124555542 01
Q ss_pred hhhhccCCCCCCcee-cCCCCccccceeEcCCCCeEEEEec
Q 005093 241 LELKESSSEDLPVVN-LTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~-lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
| ..|+..- +......+....|++|+.-||..-.
T Consensus 291 L-------rhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 291 L-------RHGEFTLRFDPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred c-------EeeeEecCCCCCCceeeEEEECCCCCEEEEEec
Confidence 1 2222211 1233445788999999999987653
No 314
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=97.34 E-value=0.003 Score=60.54 Aligned_cols=241 Identities=12% Similarity=0.074 Sum_probs=140.6
Q ss_pred cccccceEEEEEEEeecCCCCccccccCC---CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEe-
Q 005093 9 LLANKRKKFMLSTVISKENENSVTFQWAP---FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFH- 84 (715)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (715)
+.....+..|-+++..++. -.+.|.+.. |---...+....||.|...||--+.. ++-.+|.+ .+|+-.+.++
T Consensus 228 LvsgSvDGFiEVWny~~GK-lrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqD--GkIKvWri-~tG~ClRrFdr 303 (508)
T KOG0275|consen 228 LVSGSVDGFIEVWNYTTGK-LRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQD--GKIKVWRI-ETGQCLRRFDR 303 (508)
T ss_pred Eeeccccceeeeehhccch-hhhhhhhhhhcceeecccceEEEeecccHHHhhccCcC--CcEEEEEE-ecchHHHHhhh
Confidence 3344455666666555443 123332222 21112346778899999888855443 33334444 3444333332
Q ss_pred -cCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCce
Q 005093 85 -VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 163 (715)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (715)
.+.++ ..++||.|+..|+-.+.+ ..
T Consensus 304 AHtkGv----------t~l~FSrD~SqiLS~sfD--------------------------------------------~t 329 (508)
T KOG0275|consen 304 AHTKGV----------TCLSFSRDNSQILSASFD--------------------------------------------QT 329 (508)
T ss_pred hhccCe----------eEEEEccCcchhhccccc--------------------------------------------ce
Confidence 24455 799999999988764322 55
Q ss_pred EEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhh
Q 005093 164 LFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELEL 243 (715)
Q Consensus 164 l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (715)
+.+..+++|+...-. -.....+..+.|++||.. |+..+. ++.+-+++.
T Consensus 330 vRiHGlKSGK~LKEf-rGHsSyvn~a~ft~dG~~----iisaSs---------------DgtvkvW~~------------ 377 (508)
T KOG0275|consen 330 VRIHGLKSGKCLKEF-RGHSSYVNEATFTDDGHH----IISASS---------------DGTVKVWHG------------ 377 (508)
T ss_pred EEEeccccchhHHHh-cCccccccceEEcCCCCe----EEEecC---------------CccEEEecC------------
Confidence 677778887754331 112235678899999998 887651 223445553
Q ss_pred hccCCCCCCceecCC---CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 244 KESSSEDLPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 244 ~~~~~~~~~~~~lt~---~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
.+.+...-.. .+..+.++..-|.+..-+.+.++. ..+|++++++.-.+.++.+..+
T Consensus 378 -----KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrs----------ntv~imn~qGQvVrsfsSGkRE------ 436 (508)
T KOG0275|consen 378 -----KTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRS----------NTVYIMNMQGQVVRSFSSGKRE------ 436 (508)
T ss_pred -----cchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCC----------CeEEEEeccceEEeeeccCCcc------
Confidence 3333322222 233456666667665555566664 3599999988666666554422
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
.++| -....+|.|..+|.... ...||.++..+|+.++...
T Consensus 437 ---gGdF--------i~~~lSpkGewiYcigE---D~vlYCF~~~sG~LE~tl~ 476 (508)
T KOG0275|consen 437 ---GGDF--------INAILSPKGEWIYCIGE---DGVLYCFSVLSGKLERTLP 476 (508)
T ss_pred ---CCce--------EEEEecCCCcEEEEEcc---CcEEEEEEeecCceeeeee
Confidence 1122 23457899998888755 3579999988888877554
No 315
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.019 Score=57.70 Aligned_cols=78 Identities=17% Similarity=0.097 Sum_probs=46.2
Q ss_pred ccceeEcCCCCeEEEEecC---CCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCc
Q 005093 263 AFFPRFSPDGKFLVFLSAK---SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 339 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~---~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 339 (715)
..+....|||. ++|.... ... ........||+++..++..+.+.... ...+.++
T Consensus 113 ~ND~~v~pdG~-~wfgt~~~~~~~~--~~~~~~G~lyr~~p~g~~~~l~~~~~--------------------~~~NGla 169 (307)
T COG3386 113 PNDGVVDPDGR-IWFGDMGYFDLGK--SEERPTGSLYRVDPDGGVVRLLDDDL--------------------TIPNGLA 169 (307)
T ss_pred CCceeEcCCCC-EEEeCCCccccCc--cccCCcceEEEEcCCCCEEEeecCcE--------------------EecCceE
Confidence 45678899987 7777665 111 11122237999986443332222111 0246889
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
||||++.+|++-+. ..+|++++.+
T Consensus 170 ~SpDg~tly~aDT~--~~~i~r~~~d 193 (307)
T COG3386 170 FSPDGKTLYVADTP--ANRIHRYDLD 193 (307)
T ss_pred ECCCCCEEEEEeCC--CCeEEEEecC
Confidence 99999988876543 3577777664
No 316
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.33 E-value=0.016 Score=57.12 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=92.0
Q ss_pred ceEEEEEccCCceEe-ecCC-CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 162 PSLFVININSGEVQA-VKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~-l~~~-~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
.+||++|+++-++.. +..+ +.......++.++.+.. ++|-... ..++|+++|+
T Consensus 106 e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~y----lAyp~s~-------------t~GdV~l~d~-------- 160 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCY----LAYPGST-------------TSGDVVLFDT-------- 160 (391)
T ss_pred ccEEEEecccceeehhhhccCCCccceEeeccCCCCce----EEecCCC-------------CCceEEEEEc--------
Confidence 459999998766432 2112 22223334444445556 8887522 2358999987
Q ss_pred hhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 240 ELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 240 ~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
..-.....+..+++.....+|||||..||-++.+.+ -|.++..+.|+.. .+-
T Consensus 161 --------~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGT----------VIRVf~v~~G~kl--~eF-------- 212 (391)
T KOG2110|consen 161 --------INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGT----------VIRVFSVPEGQKL--YEF-------- 212 (391)
T ss_pred --------ccceeeeEEEecCCceeEEEECCCCCEEEEeccCce----------EEEEEEcCCccEe--eee--------
Confidence 244555666778888999999999999998887742 3556666665431 100
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 366 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t 366 (715)
-.|.+..++..++|++|+..| ..+...+..++++++...
T Consensus 213 -------RRG~~~~~IySL~Fs~ds~~L-~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 213 -------RRGTYPVSIYSLSFSPDSQFL-AASSNTETVHIFKLEKVS 251 (391)
T ss_pred -------eCCceeeEEEEEEECCCCCeE-EEecCCCeEEEEEecccc
Confidence 122334466788999999844 445557778899888543
No 317
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.33 E-value=0.011 Score=63.29 Aligned_cols=169 Identities=11% Similarity=0.094 Sum_probs=103.1
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe----cCCccEEE-------
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW----SQSQLEKE------- 82 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~----~~~~~~~~------- 82 (715)
....|.++|++...- + ....++.+.+...+.|||++..+-.+.+ ....+|.+- ..|..+++
T Consensus 432 k~Gel~vfdlaS~~l----~--Eti~AHdgaIWsi~~~pD~~g~vT~saD--ktVkfWdf~l~~~~~gt~~k~lsl~~~r 503 (888)
T KOG0306|consen 432 KNGELQVFDLASASL----V--ETIRAHDGAIWSISLSPDNKGFVTGSAD--KTVKFWDFKLVVSVPGTQKKVLSLKHTR 503 (888)
T ss_pred cCCceEEEEeehhhh----h--hhhhccccceeeeeecCCCCceEEecCC--cEEEEEeEEEEeccCcccceeeeeccce
Confidence 334455555654432 1 1222455778999999999988755433 222233322 12333332
Q ss_pred -EecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccC
Q 005093 83 -FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQ 161 (715)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 161 (715)
.+++..+ ..++.||||++|+..--+
T Consensus 504 tLel~ddv----------L~v~~Spdgk~LaVsLLd-------------------------------------------- 529 (888)
T KOG0306|consen 504 TLELEDDV----------LCVSVSPDGKLLAVSLLD-------------------------------------------- 529 (888)
T ss_pred EEeccccE----------EEEEEcCCCcEEEEEecc--------------------------------------------
Confidence 2233333 689999999999986332
Q ss_pred ceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
+.+.++=+++=+.. .| -....++..+..|||++. |+..+ ..++..||=+|+
T Consensus 530 nTVkVyflDtlKFflsL--YGHkLPV~smDIS~DSkl----ivTgS-------------ADKnVKiWGLdF--------- 581 (888)
T KOG0306|consen 530 NTVKVYFLDTLKFFLSL--YGHKLPVLSMDISPDSKL----IVTGS-------------ADKNVKIWGLDF--------- 581 (888)
T ss_pred CeEEEEEecceeeeeee--cccccceeEEeccCCcCe----EEecc-------------CCCceEEecccc---------
Confidence 33444444444432 33 233457788999999997 77654 224557898886
Q ss_pred hhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
+.=.+.+..++.++..+.|-|+ .+++|++.++
T Consensus 582 ---------GDCHKS~fAHdDSvm~V~F~P~-~~~FFt~gKD 613 (888)
T KOG0306|consen 582 ---------GDCHKSFFAHDDSVMSVQFLPK-THLFFTCGKD 613 (888)
T ss_pred ---------chhhhhhhcccCceeEEEEccc-ceeEEEecCc
Confidence 3334567777788889999995 5688888775
No 318
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=97.29 E-value=0.037 Score=56.00 Aligned_cols=151 Identities=15% Similarity=0.136 Sum_probs=93.3
Q ss_pred ceEEEEEccCC--ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 162 PSLFVININSG--EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 162 ~~l~~~~~~~g--~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
..|.+||..++ +.+... ...+..+..++|+|=+.. |+-++.. +..|.++|+
T Consensus 250 ~~L~iwD~R~~~~~~~~~~-~ah~~~vn~~~fnp~~~~----ilAT~S~--------------D~tV~LwDl-------- 302 (422)
T KOG0264|consen 250 GKLMIWDTRSNTSKPSHSV-KAHSAEVNCVAFNPFNEF----ILATGSA--------------DKTVALWDL-------- 302 (422)
T ss_pred CeEEEEEcCCCCCCCcccc-cccCCceeEEEeCCCCCc----eEEeccC--------------CCcEEEeec--------
Confidence 67999999853 222220 122345778899998877 7666532 236777776
Q ss_pred hhhhhccCCC-CCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccc-eeeeee
Q 005093 240 ELELKESSSE-DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK-IVDVIP 317 (715)
Q Consensus 240 ~~~~~~~~~~-~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~-~~~~~~ 317 (715)
++ ......+..+...+..+.|||.-..++-.+..+ ..|.++|+..-+..+.... .+..-.
T Consensus 303 --------RnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D----------~rl~vWDls~ig~eq~~eda~dgppE 364 (422)
T KOG0264|consen 303 --------RNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD----------RRLNVWDLSRIGEEQSPEDAEDGPPE 364 (422)
T ss_pred --------hhcccCceeccCCCcceEEEEeCCCCCceeEecccC----------CcEEEEeccccccccChhhhccCCcc
Confidence 12 235556666777889999999998886555432 3578888866443322111 111100
Q ss_pred ceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
++ -.-|.+...+..+.|.|+.-.++.+..++..-+||.+.
T Consensus 365 ll------F~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 365 LL------FIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ee------EEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 00 00122444677899999998888888887777777654
No 319
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=97.27 E-value=0.00045 Score=70.49 Aligned_cols=125 Identities=24% Similarity=0.237 Sum_probs=80.3
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-HHHHHH-hCCcEEEEEcCCCCCCCchhh---hhcCCCCCCcc
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLS-SVGYSLLIVNYRGSLGFGEEA---LQSLPGKVGSQ 539 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la-~~G~~vi~~d~rG~~~~g~~~---~~~~~~~~~~~ 539 (715)
|...++.|. . ...+.-++|+|+||++..+.....- ....|+ ....+|+.++||-+ .+|--+ ....++++|
T Consensus 121 LYlNVW~P~-~-~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG-~FGFL~l~~~~eaPGNmG-- 195 (601)
T KOG4389|consen 121 LYLNVWAPA-A-DPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVG-AFGFLYLPGHPEAPGNMG-- 195 (601)
T ss_pred eEEEEeccC-C-CCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeec-cceEEecCCCCCCCCccc--
Confidence 344567774 1 2233348999999988776654432 233454 44567888999942 244322 223344544
Q ss_pred chhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcch
Q 005093 540 DVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 596 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~~ 596 (715)
+-|..-|+.|+.++ ..-|+++|.|+|.|+|+..+..-+. .| .+|+.+|+.++..+
T Consensus 196 -l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 196 -LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred -hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcCCCC
Confidence 67888889998886 2368999999999999986654433 23 36888888777543
No 320
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.27 E-value=0.0016 Score=62.99 Aligned_cols=112 Identities=9% Similarity=0.164 Sum_probs=63.8
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCc--EEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~--~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
....++||+||..... .......++.....|+ .++.+..+..+.. ..+. ............+.+.+..|.+.
T Consensus 16 ~~~~vlvfVHGyn~~f-~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~--~d~~~a~~s~~~l~~~L~~L~~~-- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSF-EDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYF--YDRESARFSGPALARFLRDLARA-- 89 (233)
T ss_pred CCCeEEEEEeCCCCCH-HHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhh--hhhhhHHHHHHHHHHHHHHHHhc--
Confidence 4678999999943321 1122233343344444 7888988863321 1110 00111112244555666666555
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhC----C-----CceeEEEecCCcch
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQA----P-----DKFVAAAARNPLCN 596 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~----p-----~~~~~~v~~~~~~~ 596 (715)
....+|.|++||||+.+.+.++... + .+|..+++.+|-++
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 2468999999999999998876432 1 25667777777554
No 321
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.26 E-value=0.027 Score=60.55 Aligned_cols=197 Identities=14% Similarity=0.150 Sum_probs=105.2
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
...|-++|+........+ ...+..+..++.+||++. .+..+.... ..+|.+.+.
T Consensus 433 ~Gel~vfdlaS~~l~Eti-~AHdgaIWsi~~~pD~~g----~vT~saDkt-------------VkfWdf~l~-------- 486 (888)
T KOG0306|consen 433 NGELQVFDLASASLVETI-RAHDGAIWSISLSPDNKG----FVTGSADKT-------------VKFWDFKLV-------- 486 (888)
T ss_pred CCceEEEEeehhhhhhhh-hccccceeeeeecCCCCc----eEEecCCcE-------------EEEEeEEEE--------
Confidence 356888888877654332 233456778889999999 776552111 123333220
Q ss_pred hhhhccCCCCCCc-eec-------CCCCccccceeEcCCCCeEEEEecCCCCCCCCc----------cccceeEeeecCC
Q 005093 241 LELKESSSEDLPV-VNL-------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAH----------SATDSLHRIDWPT 302 (715)
Q Consensus 241 ~~~~~~~~~~~~~-~~l-------t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~----------~~~~~l~~~~~~~ 302 (715)
.+ ..|+. +.| -.-+..+-..++||||+.|+..--+.+...... ....-+.-+|++-
T Consensus 487 ----~~--~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~ 560 (888)
T KOG0306|consen 487 ----VS--VPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISP 560 (888)
T ss_pred ----ec--cCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccC
Confidence 00 11221 111 111234677899999999986554433210000 0011234566666
Q ss_pred CCCCCcccceeeeeeceecCCCCCcccc--ccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC-CcEEEecCCCCCc
Q 005093 303 NGNFSSLEKIVDVIPVVQCAEGDCFPGL--YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS-GELLRITPAESNF 379 (715)
Q Consensus 303 ~~~~~lt~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t-g~~~~l~~~~~~~ 379 (715)
.....+|.+.|.-+.+|-.+-.++.... ++.++..+.|.|+. .++|+....+ .+-.||-+. ...+.+......+
T Consensus 561 DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~-~~FFt~gKD~--kvKqWDg~kFe~iq~L~~H~~ev 637 (888)
T KOG0306|consen 561 DSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKT-HLFFTCGKDG--KVKQWDGEKFEEIQKLDGHHSEV 637 (888)
T ss_pred CcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccc-eeEEEecCcc--eEEeechhhhhhheeeccchhee
Confidence 6666778777777777766655544433 34567778888864 5778776544 444455332 1223333333333
Q ss_pred eeEEEeecCCEEE
Q 005093 380 SWSLLTLDGDNII 392 (715)
Q Consensus 380 ~~~~~s~~~~~l~ 392 (715)
.-.+.+++|+.++
T Consensus 638 ~cLav~~~G~~vv 650 (888)
T KOG0306|consen 638 WCLAVSPNGSFVV 650 (888)
T ss_pred eeeEEcCCCCeEE
Confidence 3335566665443
No 322
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=97.22 E-value=0.0039 Score=61.89 Aligned_cols=241 Identities=11% Similarity=0.067 Sum_probs=131.6
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEec-CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
..++...||+||.+++-.. ...+..+|. .-...+..+-.. .+.+..++|||...+++-.+++....
T Consensus 139 s~Vr~m~ws~~g~wmiSgD-----~gG~iKyWqpnmnnVk~~~ahh--------~eaIRdlafSpnDskF~t~SdDg~ik 205 (464)
T KOG0284|consen 139 SPVRTMKWSHNGTWMISGD-----KGGMIKYWQPNMNNVKIIQAHH--------AEAIRDLAFSPNDSKFLTCSDDGTIK 205 (464)
T ss_pred ccceeEEEccCCCEEEEcC-----CCceEEecccchhhhHHhhHhh--------hhhhheeccCCCCceeEEecCCCeEE
Confidence 4478899999999987432 224667773 222222222111 01237899999877777766665443
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCCCCCccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...+.. ...........-......|-|.-|....+.+.+-|-+||..+|.-.. + ......+..+.|+|+|..
T Consensus 206 iWdf~~--~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tl--h~HKntVl~~~f~~n~N~--- 278 (464)
T KOG0284|consen 206 IWDFRM--PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATL--HGHKNTVLAVKFNPNGNW--- 278 (464)
T ss_pred EEeccC--CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhh--hhccceEEEEEEcCCCCe---
Confidence 322211 11111111111111233444443555555566789999998886322 2 222335778999999976
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+..+ +++.+-++|+ +.-.+....-.+...+....|+|=..-|+-+..
T Consensus 279 -Llt~s---------------kD~~~kv~Di----------------R~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg 326 (464)
T KOG0284|consen 279 -LLTGS---------------KDQSCKVFDI----------------RTMKELFTYRGHKKDVTSLTWHPLNESLFTSGG 326 (464)
T ss_pred -eEEcc---------------CCceEEEEeh----------------hHhHHHHHhhcchhhheeeccccccccceeecc
Confidence 66554 3445667776 112344445555667888999998777744433
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
-+ .+|.-+.+...+..... +-.++..+.++.|.|=|. |+.+.+.+...+.|
T Consensus 327 ~D----------gsvvh~~v~~~~p~~~i------------------~~AHd~~iwsl~~hPlGh-il~tgsnd~t~rfw 377 (464)
T KOG0284|consen 327 SD----------GSVVHWVVGLEEPLGEI------------------PPAHDGEIWSLAYHPLGH-ILATGSNDRTVRFW 377 (464)
T ss_pred CC----------CceEEEeccccccccCC------------------Ccccccceeeeeccccce-eEeecCCCcceeee
Confidence 22 13444444422221111 111333566788999986 77776655555666
Q ss_pred EEEC
Q 005093 361 SVNV 364 (715)
Q Consensus 361 ~~d~ 364 (715)
.-+.
T Consensus 378 ~r~r 381 (464)
T KOG0284|consen 378 TRNR 381 (464)
T ss_pred ccCC
Confidence 5443
No 323
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.21 E-value=0.0038 Score=59.13 Aligned_cols=192 Identities=16% Similarity=0.137 Sum_probs=101.9
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhH
Q 005093 467 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDV 544 (715)
Q Consensus 467 ~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~ 544 (715)
.|+..|+ ++. .||.+-||.+....+ .|..+.+.|+++||.|++.-|.-+-.|..-. .......
T Consensus 8 ~wvl~P~-----~P~-gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A---------~~~~~~f 72 (250)
T PF07082_consen 8 SWVLIPP-----RPK-GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIA---------REVWERF 72 (250)
T ss_pred cEEEeCC-----CCC-EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHH---------HHHHHHH
Confidence 4677775 233 455555655543333 6778899999999999999987532221111 0113344
Q ss_pred HHHHHHHHHcCCCCC--ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCC
Q 005093 545 LTAIDHVIDMGLANP--SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDS 622 (715)
Q Consensus 545 ~~~i~~l~~~~~~d~--~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (715)
..+++.|.++...+. -+++-+|||+|+-+-+.+....+..-++-++++- -+.. ....++. .+.+.......
T Consensus 73 ~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF-NN~~---a~~aIP~---~~~l~~~l~~E 145 (250)
T PF07082_consen 73 ERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF-NNFP---ADEAIPL---LEQLAPALRLE 145 (250)
T ss_pred HHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEec-CChH---HHhhCch---HhhhccccccC
Confidence 556666666543333 3688899999999988877655433344444331 1100 0000110 01111100111
Q ss_pred CCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCC-cEEEEEeCCCCcc
Q 005093 623 FTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV-ETKVIVFPNDVHG 692 (715)
Q Consensus 623 ~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~ 692 (715)
+ .|..++...+.+.+ + .....|++.=.+|.+ +++..+.+.|+++.. .++....+| .|-
T Consensus 146 F--~PsP~ET~~li~~~---Y---~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HL 204 (250)
T PF07082_consen 146 F--TPSPEETRRLIRES---Y---QVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHL 204 (250)
T ss_pred c--cCCHHHHHHHHHHh---c---CCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCC
Confidence 1 12223322222211 0 123468888888865 678888888886633 355667764 684
No 324
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.21 E-value=0.23 Score=58.19 Aligned_cols=109 Identities=11% Similarity=0.024 Sum_probs=60.0
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
....++|-.||+++|..+-... . .....+.+++-.+ .....++ ..+| -...++|.
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~---~--~~~R~iRVy~ReG-~L~stSE---------------~v~g----Le~~l~Wr 265 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPE---T--GSRRVIRVYSREG-ELQSTSE---------------PVDG----LEGALSWR 265 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcC---C--CceeEEEEECCCc-eEEeccc---------------cCCC----ccCCccCC
Confidence 3456789999999987776431 0 1234566676542 2211111 1111 23578899
Q ss_pred cCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC----CCCceeEEEeecCCEEEEEE
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA----ESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~----~~~~~~~~~s~~~~~l~~~~ 395 (715)
|.|+.|..+....+...+..+...+-+...+... ...+....|+.|+.-|++..
T Consensus 266 PsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~ 323 (928)
T PF04762_consen 266 PSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWL 323 (928)
T ss_pred CCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEe
Confidence 9999665554444556677676654333333221 22334456777777666554
No 325
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=97.19 E-value=0.12 Score=49.74 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=66.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
..++..+|||.-..++-....+ +...+|.+.+.|....... ....+ ++-...||.||.+++..+-
T Consensus 28 DsIS~l~FSP~~~~~~~A~SWD-~tVR~wevq~~g~~~~ka~--~~~~~------PvL~v~WsddgskVf~g~~------ 92 (347)
T KOG0647|consen 28 DSISALAFSPQADNLLAAGSWD-GTVRIWEVQNSGQLVPKAQ--QSHDG------PVLDVCWSDDGSKVFSGGC------ 92 (347)
T ss_pred cchheeEeccccCceEEecccC-CceEEEEEecCCcccchhh--hccCC------CeEEEEEccCCceEEeecc------
Confidence 5689999999665555555555 7777888875555443211 11111 2268899999977655321
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
..++-+|||.++++.++ ...+..+....|-+-..
T Consensus 93 --------------------------------------Dk~~k~wDL~S~Q~~~v--~~Hd~pvkt~~wv~~~~ 126 (347)
T KOG0647|consen 93 --------------------------------------DKQAKLWDLASGQVSQV--AAHDAPVKTCHWVPGMN 126 (347)
T ss_pred --------------------------------------CCceEEEEccCCCeeee--eecccceeEEEEecCCC
Confidence 25688999999999888 56666777788876554
No 326
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=97.17 E-value=0.0068 Score=58.46 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=74.7
Q ss_pred ceEEEEEccCCceEeecC---CCCCC-ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININSGEVQAVKG---IPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~---~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
.-|.+||.-+|+.+.-.. ...++ ....+.|||||.. +|.+. ++ -|.++|+.
T Consensus 133 ~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeq-----lfaGy-------------kr--cirvFdt~----- 187 (406)
T KOG2919|consen 133 QPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQ-----LFAGY-------------KR--CIRVFDTS----- 187 (406)
T ss_pred CceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCe-----Eeecc-------------cc--eEEEeecc-----
Confidence 569999999998775420 01111 3447899999997 45541 12 35555541
Q ss_pred hhhhhhhccCCCCCCc----eecCC----CCccccceeEcCCC-CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCc
Q 005093 238 ASELELKESSSEDLPV----VNLTE----SISSAFFPRFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 308 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~----~~lt~----~~~~~~~~~~spdg-~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~l 308 (715)
..|.- ..++. ..+-+...+|||-. +.+++.+... ...||. ..+.....+
T Consensus 188 -----------RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q---------~~giy~--~~~~~pl~l 245 (406)
T KOG2919|consen 188 -----------RPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ---------RVGIYN--DDGRRPLQL 245 (406)
T ss_pred -----------CCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccc---------eeeeEe--cCCCCceee
Confidence 22221 12222 12346778888844 4666665442 123443 334443322
Q ss_pred ccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 309 LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 309 t~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
..+ +..++..++|.+||+.+|..+. ....|..+|+.
T Consensus 246 lgg-------------------h~gGvThL~~~edGn~lfsGaR--k~dkIl~WDiR 281 (406)
T KOG2919|consen 246 LGG-------------------HGGGVTHLQWCEDGNKLFSGAR--KDDKILCWDIR 281 (406)
T ss_pred ecc-------------------cCCCeeeEEeccCcCeeccccc--CCCeEEEEeeh
Confidence 211 2236778899999997654332 23467778875
No 327
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=97.17 E-value=0.088 Score=53.11 Aligned_cols=143 Identities=11% Similarity=0.078 Sum_probs=91.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCC-ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.+.....-|.|.++...++++ .|.+. ..| ....+.+...++ .++...|+||| |+|....
T Consensus 304 ~~V~~ls~h~tgeYllsAs~d~-----~w~Fsd~~~g~~lt~vs~~~s~v--------~~ts~~fHpDg--Lifgtgt-- 366 (506)
T KOG0289|consen 304 EPVTGLSLHPTGEYLLSASNDG-----TWAFSDISSGSQLTVVSDETSDV--------EYTSAAFHPDG--LIFGTGT-- 366 (506)
T ss_pred ccceeeeeccCCcEEEEecCCc-----eEEEEEccCCcEEEEEeeccccc--------eeEEeeEcCCc--eEEeccC--
Confidence 5578888899999998776653 56665 333 333333321222 23789999999 5564221
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
....|-+||++.+... .. ......+...+||-+|-.
T Consensus 367 ----------------------------------------~d~~vkiwdlks~~~~a~F--pght~~vk~i~FsENGY~- 403 (506)
T KOG0289|consen 367 ----------------------------------------PDGVVKIWDLKSQTNVAKF--PGHTGPVKAISFSENGYW- 403 (506)
T ss_pred ----------------------------------------CCceEEEEEcCCccccccC--CCCCCceeEEEeccCceE-
Confidence 2377999999876532 22 223446778999999987
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc-cccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-~~~~~~~spdg~~l~~ 277 (715)
++..++ +..+.++|| +.......++.++. .+.+..|.+.|++|+.
T Consensus 404 ---Lat~ad---------------d~~V~lwDL----------------RKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~ 449 (506)
T KOG0289|consen 404 ---LATAAD---------------DGSVKLWDL----------------RKLKNFKTIQLDEKKEVNSLSFDQSGTYLGI 449 (506)
T ss_pred ---EEEEec---------------CCeEEEEEe----------------hhhcccceeeccccccceeEEEcCCCCeEEe
Confidence 777662 124777787 34445555444332 5778999999999976
Q ss_pred Ee
Q 005093 278 LS 279 (715)
Q Consensus 278 ~~ 279 (715)
.+
T Consensus 450 ~g 451 (506)
T KOG0289|consen 450 AG 451 (506)
T ss_pred ec
Confidence 63
No 328
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.17 E-value=0.019 Score=61.57 Aligned_cols=207 Identities=13% Similarity=0.086 Sum_probs=121.2
Q ss_pred EeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCcc
Q 005093 48 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 126 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 126 (715)
.+||++|+.|+-.-.+ .+..++ .+++.. +........ ..+..+..+||++.|+....
T Consensus 25 ~~~s~nG~~L~t~~~d-----~Vi~idv~t~~~~-l~s~~~ed~------d~ita~~l~~d~~~L~~a~r---------- 82 (775)
T KOG0319|consen 25 VAWSSNGQHLYTACGD-----RVIIIDVATGSIA-LPSGSNEDE------DEITALALTPDEEVLVTASR---------- 82 (775)
T ss_pred eeECCCCCEEEEecCc-----eEEEEEccCCcee-cccCCccch------hhhheeeecCCccEEEEeec----------
Confidence 8999999998755333 355566 555442 222211111 23479999999988877532
Q ss_pred CCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEe
Q 005093 127 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
...|-+|.+.+|+..+.-......++.-++|.|-| . ++-++
T Consensus 83 ----------------------------------s~llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g-~----LlAtg 123 (775)
T KOG0319|consen 83 ----------------------------------SQLLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTG-T----LLATG 123 (775)
T ss_pred ----------------------------------cceEEEEEcccchHhHhHhhccCCCeEEEEEcCCC-c----eEEec
Confidence 25688899999875543112234566678899998 6 66665
Q ss_pred ecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCC
Q 005093 207 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDS 286 (715)
Q Consensus 207 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 286 (715)
..+ ..+-++|+. ...-...+-...+.+....|.|+-++....+..+
T Consensus 124 gaD--------------~~v~VWdi~----------------~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~---- 169 (775)
T KOG0319|consen 124 GAD--------------GRVKVWDIK----------------NGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGAT---- 169 (775)
T ss_pred ccc--------------ceEEEEEee----------------CCEEEEEecCCCceEEEEEeCCccchhheeecCC----
Confidence 322 245555551 3344556777788899999999877633333222
Q ss_pred CCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC
Q 005093 287 GAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 366 (715)
Q Consensus 287 g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t 366 (715)
...++++|+..+.. .+-. +. .+...+..+.+++|+..++..+. + .-++.+|+.+
T Consensus 170 -----D~~v~vwnl~~~~t-cl~~----------~~-------~H~S~vtsL~~~~d~~~~ls~~R-D--kvi~vwd~~~ 223 (775)
T KOG0319|consen 170 -----DGTVRVWNLNDKRT-CLHT----------MI-------LHKSAVTSLAFSEDSLELLSVGR-D--KVIIVWDLVQ 223 (775)
T ss_pred -----CceEEEEEcccCch-HHHH----------HH-------hhhhheeeeeeccCCceEEEecc-C--cEEEEeehhh
Confidence 23588888876443 1100 00 01113456778889886655432 2 3466667655
Q ss_pred CcEEEecCC
Q 005093 367 GELLRITPA 375 (715)
Q Consensus 367 g~~~~l~~~ 375 (715)
-+..++.+.
T Consensus 224 ~~~l~~lp~ 232 (775)
T KOG0319|consen 224 YKKLKTLPL 232 (775)
T ss_pred hhhhheech
Confidence 554444443
No 329
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.16 E-value=0.048 Score=61.17 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=59.9
Q ss_pred ceEEEEecCCCCCCeEEEEe-cCCccEEE-EecCccccccccCCCcccceeecCCCCeEEE-EeecCCCCCCCccCCCCC
Q 005093 55 SKLLVVRNPENESPIQFELW-SQSQLEKE-FHVPQTVHGSVYADGWFEGISWNSDETLIAY-VAEEPSPSKPTFSLGSTK 131 (715)
Q Consensus 55 ~~la~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~-~~~~~~~~~~~~~~~~~~ 131 (715)
.+|||+.... + .+..++ ++...+.+ +.....+ ..+.|||||++||| ++-+.-.
T Consensus 319 tkiAfv~~~~-~--~L~~~D~dG~n~~~ve~~~~~~i----------~sP~~SPDG~~vAY~ts~e~~~----------- 374 (912)
T TIGR02171 319 AKLAFRNDVT-G--NLAYIDYTKGASRAVEIEDTISV----------YHPDISPDGKKVAFCTGIEGLP----------- 374 (912)
T ss_pred eeEEEEEcCC-C--eEEEEecCCCCceEEEecCCCce----------ecCcCCCCCCEEEEEEeecCCC-----------
Confidence 5789987632 2 677788 55555555 5544444 68999999999999 4322100
Q ss_pred CCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc--eEeecCCCCCCccceEEEecCCCCCccEEEEEeec
Q 005093 132 GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 208 (715)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~--~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~ 208 (715)
+.+.||+.+|.+.. +..|. -.+..+-..+...+|.+. |+|++..
T Consensus 375 ----------------------------g~s~vYv~~L~t~~~~~vkl~--ve~aaiprwrv~e~gdt~---ivyv~~a 420 (912)
T TIGR02171 375 ----------------------------GKSSVYVRNLNASGSGLVKLP--VENAAIPRWRVLENGDTV---IVYVSDA 420 (912)
T ss_pred ----------------------------CCceEEEEehhccCCCceEee--cccccccceEecCCCCeE---EEEEcCC
Confidence 24779999997643 33341 122233344456788874 7787643
No 330
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.15 E-value=0.15 Score=48.94 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=27.0
Q ss_pred cCceEEEEEccCCceEeec-CCCCCCccceEEEecCCCCCccEEEEEe
Q 005093 160 RQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
.+..|-++|...+ .+.+- -....+...++.|.+||+. ++...
T Consensus 138 ~rGViGvYd~r~~-fqrvgE~~t~GiGpHev~lm~DGrt----lvvan 180 (366)
T COG3490 138 NRGVIGVYDAREG-FQRVGEFSTHGIGPHEVTLMADGRT----LVVAN 180 (366)
T ss_pred CCceEEEEecccc-cceecccccCCcCcceeEEecCCcE----EEEeC
Confidence 3577889988633 33331 0223445668999999998 77653
No 331
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.13 E-value=0.0074 Score=60.38 Aligned_cols=168 Identities=17% Similarity=0.085 Sum_probs=88.1
Q ss_pred ceEEEEE-ccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVIN-INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~-~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..+.+|+ +........ ......+.++.|||||+. |++.+.. ...||..+
T Consensus 166 g~lRv~~~Ps~~t~l~e--~~~~~eV~DL~FS~dgk~----lasig~d--------------~~~VW~~~---------- 215 (398)
T KOG0771|consen 166 GTLRVWEWPSMLTILEE--IAHHAEVKDLDFSPDGKF----LASIGAD--------------SARVWSVN---------- 215 (398)
T ss_pred ceEEEEecCcchhhhhh--HhhcCccccceeCCCCcE----EEEecCC--------------ceEEEEec----------
Confidence 5577777 322222222 233456789999999999 9998732 12566665
Q ss_pred hhhhccCCCCCCceecCCC--CccccceeEcCCC---CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeee
Q 005093 241 LELKESSSEDLPVVNLTES--ISSAFFPRFSPDG---KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 315 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~--~~~~~~~~~spdg---~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~ 315 (715)
.+....++++. +......+|+-|+ ...+++...+. ..-...++.+++.. ...++....
T Consensus 216 --------~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~----~~v~~~~~~~w~~~--~~l~~~~~~--- 278 (398)
T KOG0771|consen 216 --------TGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPG----GGVRLCDISLWSGS--NFLRLRKKI--- 278 (398)
T ss_pred --------cCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCC----CceeEEEeeeeccc--cccchhhhh---
Confidence 44455566633 2246778888887 33444444431 11111223333321 111110000
Q ss_pred eeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--CceeEEEeecCCEEEE
Q 005093 316 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIA 393 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--~~~~~~~s~~~~~l~~ 393 (715)
..+ .++..+.-++||+.+.+.+. .+...| ++..+-+..++.+... .+....|+||.+.+.-
T Consensus 279 ---------~~~-----~siSsl~VS~dGkf~AlGT~-dGsVai--~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 279 ---------KRF-----KSISSLAVSDDGKFLALGTM-DGSVAI--YDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred ---------hcc-----CcceeEEEcCCCcEEEEecc-CCcEEE--EEeceeeeeEeehhhheeeeeeEEEcCCcCcccc
Confidence 000 14567778999997766655 443444 4554555555554433 3344578888776654
No 332
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=97.13 E-value=0.002 Score=62.91 Aligned_cols=137 Identities=14% Similarity=0.184 Sum_probs=83.8
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
...|+++|+..+.+..- ..-.......+|+| +. ..|++. +.+..||.+|.
T Consensus 209 DrsIvLyD~R~~~Pl~K--Vi~~mRTN~IswnP--ea----fnF~~a-------------~ED~nlY~~Dm--------- 258 (433)
T KOG0268|consen 209 DRSIVLYDLRQASPLKK--VILTMRTNTICWNP--EA----FNFVAA-------------NEDHNLYTYDM--------- 258 (433)
T ss_pred CCceEEEecccCCccce--eeeeccccceecCc--cc----cceeec-------------cccccceehhh---------
Confidence 36799999987765321 11122344679999 44 667662 23457999996
Q ss_pred hhhhccCCCCCCceecCCCCc-cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 241 LELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~-~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
..-.+...+..+.. ..-++.|||.|+.++-.+.+. .|.++....+..+.+-... ..
T Consensus 259 -------R~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk-----------sIRIf~~~~~~SRdiYhtk-RM---- 315 (433)
T KOG0268|consen 259 -------RNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK-----------SIRIFPVNHGHSRDIYHTK-RM---- 315 (433)
T ss_pred -------hhhcccchhhcccceeEEEeccCCCcchhccccccc-----------eEEEeecCCCcchhhhhHh-hh----
Confidence 23333333333322 478899999999998776654 3555555554443221111 00
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
-.+..+.||-|.+ ++++.+++++.+||+-+.
T Consensus 316 -------------q~V~~Vk~S~Dsk-yi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 316 -------------QHVFCVKYSMDSK-YIISGSDDGNVRLWKAKA 346 (433)
T ss_pred -------------heeeEEEEecccc-EEEecCCCcceeeeecch
Confidence 0244667999987 557778888899998775
No 333
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.12 E-value=0.026 Score=60.59 Aligned_cols=146 Identities=14% Similarity=0.197 Sum_probs=85.8
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
...+.+.+.+||++.|+...+. ++..+| ..|+..+..- ..| +++.-...++|.|..++-...+..
T Consensus 62 ~d~ita~~l~~d~~~L~~a~rs-----~llrv~~L~tgk~irswK---a~H-----e~Pvi~ma~~~~g~LlAtggaD~~ 128 (775)
T KOG0319|consen 62 EDEITALALTPDEEVLVTASRS-----QLLRVWSLPTGKLIRSWK---AIH-----EAPVITMAFDPTGTLLATGGADGR 128 (775)
T ss_pred hhhhheeeecCCccEEEEeecc-----ceEEEEEcccchHhHhHh---hcc-----CCCeEEEEEcCCCceEEeccccce
Confidence 3557889999999998877554 567777 5554444322 111 112257889999966655443332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcc--cCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGET--YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
.+.|......................|.|+|-.- ..+.....+++||+.++..-..+-......+..+.+++|+..
T Consensus 129 --v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~ 206 (775)
T KOG0319|consen 129 --VKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLE 206 (775)
T ss_pred --EEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCce
Confidence 2334433333333344444455555666666221 223345889999998665411110122335778999999998
Q ss_pred CccEEEEEe
Q 005093 198 LHQYLVFVG 206 (715)
Q Consensus 198 ~~~~i~~~~ 206 (715)
+++.+
T Consensus 207 ----~ls~~ 211 (775)
T KOG0319|consen 207 ----LLSVG 211 (775)
T ss_pred ----EEEec
Confidence 88776
No 334
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.12 E-value=0.002 Score=66.52 Aligned_cols=136 Identities=18% Similarity=0.211 Sum_probs=92.4
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcC-CCCCCCCc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHG-GPHSVSLS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHG-g~~~~~~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
.|.+..+...+-++|.+..+. ....|+.|+|-| |+....+- .-..+....++.|..|+..++|- ||.+.....
T Consensus 62 hF~~~~~~~~Qq~~y~n~~~~-~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRF---YG~S~P~~~ 137 (514)
T KOG2182|consen 62 HFDSSNGKFFQQRFYNNNQWA-KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRF---YGQSSPIGD 137 (514)
T ss_pred hhhcchhhhhhhheeeccccc-cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeec---cccCCCCCC
Confidence 444445555666677776542 456799999977 44332111 12235566678999999999998 665532111
Q ss_pred C------CCCCccchhhHHHHHHHHHHcCC-CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 533 P------GKVGSQDVNDVLTAIDHVIDMGL-ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 533 ~------~~~~~~~~~d~~~~i~~l~~~~~-~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
. .-...+.+.|++.+|+.+..+.. -+..+++.+|.|+-|.+++++=.++|+++.++|+.++++
T Consensus 138 ~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 138 LSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred CcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 0 01123346788888888877653 344599999999999999999999999999988877654
No 335
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.12 E-value=0.0024 Score=64.06 Aligned_cols=132 Identities=18% Similarity=0.214 Sum_probs=79.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch----HHHHHHHhCCcEEEEEcCCCCC---CCchhhh-h--
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSL---GFGEEAL-Q-- 530 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~----~~~~~la~~G~~vi~~d~rG~~---~~g~~~~-~-- 530 (715)
+..+.+-.+..-..+=..+..|+++|. |.-+. ...|. .+.+...+.+..++.+.+|-.| .||.... +
T Consensus 61 ~~~tF~qRylin~~fw~~g~gPIffYt-GNEGd--ie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~ 137 (492)
T KOG2183|consen 61 DNKTFDQRYLINDDFWKKGEGPIFFYT-GNEGD--IEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDAR 137 (492)
T ss_pred CccceeeEEEEecccccCCCCceEEEe-CCccc--HHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChh
Confidence 344555555554444233447755554 52221 11111 1233445678889999988621 1222211 0
Q ss_pred cCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEec-CCcc
Q 005093 531 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAAR-NPLC 595 (715)
Q Consensus 531 ~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~-~~~~ 595 (715)
.+..-..++...|.+..|.+|++.......+|+++|.|+||++++++-.++|..+.++.+. +|+.
T Consensus 138 hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 138 HLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred hhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 0111122345778888999998876666789999999999999999999999987766544 4443
No 336
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.10 E-value=0.065 Score=63.89 Aligned_cols=86 Identities=10% Similarity=0.106 Sum_probs=44.4
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCC-CccccccCCCCCCccc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD-CFPGLYSSSILSNPWL 341 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 341 (715)
...+++++||+ |+++... ...|.++|..++....+.... ... ..++ ...+.. ..+..++++
T Consensus 806 P~Gvavd~dG~-LYVADs~----------N~rIrviD~~tg~v~tiaG~G--~~G----~~dG~~~~a~l-~~P~GIavd 867 (1057)
T PLN02919 806 PLGVLCAKDGQ-IYVADSY----------NHKIKKLDPATKRVTTLAGTG--KAG----FKDGKALKAQL-SEPAGLALG 867 (1057)
T ss_pred CceeeEeCCCc-EEEEECC----------CCEEEEEECCCCeEEEEeccC--CcC----CCCCccccccc-CCceEEEEe
Confidence 34677889987 5443322 245888887765432221100 000 0000 000000 124566788
Q ss_pred cCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNVSSGEL 369 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~~tg~~ 369 (715)
+||+ +|++. .+...|..+|+.+++.
T Consensus 868 ~dG~-lyVaD--t~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 868 ENGR-LFVAD--TNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCCC-EEEEE--CCCCEEEEEECCCCcc
Confidence 8996 65543 3445788889888765
No 337
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=97.09 E-value=0.04 Score=56.28 Aligned_cols=229 Identities=12% Similarity=0.072 Sum_probs=126.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
..+....|=.||+.||---+. +.-++|.+......+.+-.....+ ....|+|++..++..+.++
T Consensus 69 ~~v~s~~fR~DG~LlaaGD~s--G~V~vfD~k~r~iLR~~~ah~apv----------~~~~f~~~d~t~l~s~sDd---- 132 (487)
T KOG0310|consen 69 DVVYSVDFRSDGRLLAAGDES--GHVKVFDMKSRVILRQLYAHQAPV----------HVTKFSPQDNTMLVSGSDD---- 132 (487)
T ss_pred cceeEEEeecCCeEEEccCCc--CcEEEeccccHHHHHHHhhccCce----------eEEEecccCCeEEEecCCC----
Confidence 346777787889877643222 333343311111111111122222 5788999998887765543
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCccE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
..+-.||+++..++ .+ ......+...+|+|-...
T Consensus 133 ---------------------------------------~v~k~~d~s~a~v~~~l--~~htDYVR~g~~~~~~~h---- 167 (487)
T KOG0310|consen 133 ---------------------------------------KVVKYWDLSTAYVQAEL--SGHTDYVRCGDISPANDH---- 167 (487)
T ss_pred ---------------------------------------ceEEEEEcCCcEEEEEe--cCCcceeEeeccccCCCe----
Confidence 45777888888763 23 334446778899999999
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec-CCCCccccceeEcCCCCeEEEEec
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-t~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|++++.-++ .|-.+|+ .......+ .+....+.+..+.|.|..|+-++.
T Consensus 168 ivvtGsYDg--------------~vrl~Dt-----------------R~~~~~v~elnhg~pVe~vl~lpsgs~iasAgG 216 (487)
T KOG0310|consen 168 IVVTGSYDG--------------KVRLWDT-----------------RSLTSRVVELNHGCPVESVLALPSGSLIASAGG 216 (487)
T ss_pred EEEecCCCc--------------eEEEEEe-----------------ccCCceeEEecCCCceeeEEEcCCCCEEEEcCC
Confidence 999884333 4555564 22222222 234446888999999998875553
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
.++-+||+.+|+.. ++... .+...+..+++..|+..|+ +..-++...+|
T Consensus 217 ------------n~vkVWDl~~G~ql-l~~~~-----------------~H~KtVTcL~l~s~~~rLl-S~sLD~~VKVf 265 (487)
T KOG0310|consen 217 ------------NSVKVWDLTTGGQL-LTSMF-----------------NHNKTVTCLRLASDSTRLL-SGSLDRHVKVF 265 (487)
T ss_pred ------------CeEEEEEecCCcee-hhhhh-----------------cccceEEEEEeecCCceEe-ecccccceEEE
Confidence 35889998865532 11110 0111334455666776554 44445555565
Q ss_pred EEECCCCcEEE-ecCCCCCceeEEEeecCCEEEEEEeC
Q 005093 361 SVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 361 ~~d~~tg~~~~-l~~~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
. +.+-++.- +.-... +-...+++++..+++--++
T Consensus 266 d--~t~~Kvv~s~~~~~p-vLsiavs~dd~t~viGmsn 300 (487)
T KOG0310|consen 266 D--TTNYKVVHSWKYPGP-VLSIAVSPDDQTVVIGMSN 300 (487)
T ss_pred E--ccceEEEEeeecccc-eeeEEecCCCceEEEeccc
Confidence 4 32333222 222222 2235677777777654443
No 338
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=97.08 E-value=0.024 Score=59.34 Aligned_cols=271 Identities=14% Similarity=0.085 Sum_probs=138.8
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+.+...+..|.|.+||--+.. + ...|| .+|+-.+.+++...+ ..++|+|.++.-+..+...
T Consensus 399 Htg~Vr~iSvdp~G~wlasGsdD--G---tvriWEi~TgRcvr~~~~d~~I----------~~vaw~P~~~~~vLAvA~~ 463 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWLASGSDD--G---TVRIWEIATGRCVRTVQFDSEI----------RSVAWNPLSDLCVLAVAVG 463 (733)
T ss_pred cCCeEEEEEecCCcceeeecCCC--C---cEEEEEeecceEEEEEeeccee----------EEEEecCCCCceeEEEEec
Confidence 45668889999999999865443 3 44555 566666666665544 8999999987654443222
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc-----eEeecCCCCCCccceEEEec
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-----VQAVKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~-----~~~l~~~~~~~~~~~~~~sp 193 (715)
.. .-..+............ ..-+.-.|. ......++..|.....+ +... ....-.+.++.|.-
T Consensus 464 ~~-~~ivnp~~G~~~e~~~t----~ell~~~~~-----~~~p~~~~~~W~~~~~~e~~~~v~~~--I~~~k~i~~vtWHr 531 (733)
T KOG0650|consen 464 EC-VLIVNPIFGDRLEVGPT----KELLASAPN-----ESEPDAAVVTWSRASLDELEKGVCIV--IKHPKSIRQVTWHR 531 (733)
T ss_pred Cc-eEEeCccccchhhhcch----hhhhhcCCC-----ccCCcccceeechhhhhhhccceEEE--EecCCccceeeeec
Confidence 11 10111111100000000 000000000 00011244455433111 1111 22333577899999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGK 273 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~ 273 (715)
+|.. |+.+.-.. .+..+++.+|. .......+....+.+-...|.|---
T Consensus 532 kGDY----latV~~~~------------~~~~VliHQLS----------------K~~sQ~PF~kskG~vq~v~FHPs~p 579 (733)
T KOG0650|consen 532 KGDY----LATVMPDS------------GNKSVLIHQLS----------------KRKSQSPFRKSKGLVQRVKFHPSKP 579 (733)
T ss_pred CCce----EEEeccCC------------CcceEEEEecc----------------cccccCchhhcCCceeEEEecCCCc
Confidence 9998 88776332 22367777761 2222234445566788889999888
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCC-C-CcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-F-SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~-~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
+|+.++.+. |.++|+..... + .+|... -+..++.+|.|..|++.+
T Consensus 580 ~lfVaTq~~------------vRiYdL~kqelvKkL~tg~k---------------------wiS~msihp~GDnli~gs 626 (733)
T KOG0650|consen 580 YLFVATQRS------------VRIYDLSKQELVKKLLTGSK---------------------WISSMSIHPNGDNLILGS 626 (733)
T ss_pred eEEEEeccc------------eEEEehhHHHHHHHHhcCCe---------------------eeeeeeecCCCCeEEEec
Confidence 887666553 77778876432 1 122111 134556778888787765
Q ss_pred eeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEE
Q 005093 352 IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKY 406 (715)
Q Consensus 352 ~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~ 406 (715)
.+ ...-.+-+|+.++-.+.+..... ....++-....=+|.+.+.+..-.||.
T Consensus 627 ~d-~k~~WfDldlsskPyk~lr~H~~--avr~Va~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 627 YD-KKMCWFDLDLSSKPYKTLRLHEK--AVRSVAFHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred CC-CeeEEEEcccCcchhHHhhhhhh--hhhhhhhccccceeeeecCCCcEEEEe
Confidence 53 22333345555555555544333 112223333333444444444444544
No 339
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.07 E-value=0.11 Score=49.85 Aligned_cols=55 Identities=24% Similarity=0.486 Sum_probs=36.6
Q ss_pred EeeCCCCceEEEEecCCCCCCeEEEEe--cC--CccEEEEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 48 VVPSPSGSKLLVVRNPENESPIQFELW--SQ--SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
.+.|.||+.||.+.+. ..++. ++ +......+++.+.+-. -..+.||||++.|||.
T Consensus 3 ~~~~~~Gk~lAi~qd~------~iEiRsa~Ddf~si~~kcqVpkD~~PQ------WRkl~WSpD~tlLa~a 61 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQ------CIEIRSAKDDFSSIIGKCQVPKDPNPQ------WRKLAWSPDCTLLAYA 61 (282)
T ss_pred eeecCCCcEEEEEecc------EEEEEeccCCchheeEEEecCCCCCch------heEEEECCCCcEEEEE
Confidence 4678999999998663 45554 22 2333444555554211 1588999999999996
No 340
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=97.06 E-value=0.12 Score=55.02 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=94.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe---cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
..+...++|.+.+.||..+..+ ...+| .+=-.+.++.. ++. ..+.++.|++.| +|.-+ .
T Consensus 26 s~I~slA~s~kS~~lAvsRt~g-----~IEiwN~~~~w~~~~vi~g--~~d------rsIE~L~W~e~~-RLFS~-g--- 87 (691)
T KOG2048|consen 26 SEIVSLAYSHKSNQLAVSRTDG-----NIEIWNLSNNWFLEPVIHG--PED------RSIESLAWAEGG-RLFSS-G--- 87 (691)
T ss_pred cceEEEEEeccCCceeeeccCC-----cEEEEccCCCceeeEEEec--CCC------CceeeEEEccCC-eEEee-c---
Confidence 5688999999999999776553 45556 22123333333 222 234899999544 55332 1
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
....|.-||+-+++...-. ......+.+++.+|.+..
T Consensus 88 ----------------------------------------~sg~i~EwDl~~lk~~~~~-d~~gg~IWsiai~p~~~~-- 124 (691)
T KOG2048|consen 88 ----------------------------------------LSGSITEWDLHTLKQKYNI-DSNGGAIWSIAINPENTI-- 124 (691)
T ss_pred ----------------------------------------CCceEEEEecccCceeEEe-cCCCcceeEEEeCCccce--
Confidence 1266899999888766542 333445667777888876
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc---eecCCCCccccceeEcCCCCeEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
++.... + +.++.++. ..+.. +.|....+.+-++.|+|+|.+|+
T Consensus 125 --l~Igcd-------------d--Gvl~~~s~-----------------~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~ 170 (691)
T KOG2048|consen 125 --LAIGCD-------------D--GVLYDFSI-----------------GPDKITYKRSLMRQKSRVLSLSWNPTGTKIA 170 (691)
T ss_pred --EEeecC-------------C--ceEEEEec-----------------CCceEEEEeecccccceEEEEEecCCccEEE
Confidence 554431 1 24555553 22322 22333456688899999999997
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
-.+.+ ..|..+|..++..
T Consensus 171 ~Gs~D-----------g~Iriwd~~~~~t 188 (691)
T KOG2048|consen 171 GGSID-----------GVIRIWDVKSGQT 188 (691)
T ss_pred ecccC-----------ceEEEEEcCCCce
Confidence 55544 2366677666554
No 341
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.05 E-value=0.043 Score=54.05 Aligned_cols=175 Identities=17% Similarity=0.162 Sum_probs=94.1
Q ss_pred EEEEEccCC--ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 164 LFVININSG--EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 164 l~~~~~~~g--~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
+.+||.++- ..+.+ ...+..+..+.|-|-|.. |+-.. ++..|...++
T Consensus 174 ~~LWd~~~~~~c~ks~--~gh~h~vS~V~f~P~gd~----ilS~s---------------rD~tik~We~---------- 222 (406)
T KOG0295|consen 174 AKLWDFDTFFRCIKSL--IGHEHGVSSVFFLPLGDH----ILSCS---------------RDNTIKAWEC---------- 222 (406)
T ss_pred hhheeHHHHHHHHHHh--cCcccceeeEEEEecCCe----eeecc---------------cccceeEEec----------
Confidence 677777652 12222 233446778899999987 77665 3334555555
Q ss_pred hhhccCCCCC-CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcc-cceeeeeece
Q 005093 242 ELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL-EKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~-~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt-~~~~~~~~~~ 319 (715)
.++ ...+++.+...+..++.+-||.-++-.++.. .|.++-+.+++-+.+- .... +++-+
T Consensus 223 -------~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dq-----------tl~vW~~~t~~~k~~lR~hEh-~vEci 283 (406)
T KOG0295|consen 223 -------DTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQ-----------TLRVWVVATKQCKAELREHEH-PVECI 283 (406)
T ss_pred -------ccceeEEeccCchHhEEEEEecCCeeEEEecCCCc-----------eEEEEEeccchhhhhhhcccc-ceEEE
Confidence 344 4556677777888899999998776555542 3555655666433222 1111 22222
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCceeEEEeecCCEEEEEE
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~~~~~l~~~~ 395 (715)
........| ++....-+.|+-.++++.+++...++ +|+.+|...--..+ ..-+....|+|.|+.|+-.+
T Consensus 284 ~wap~~~~~-----~i~~at~~~~~~~~l~s~SrDktIk~--wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~Sca 353 (406)
T KOG0295|consen 284 AWAPESSYP-----SISEATGSTNGGQVLGSGSRDKTIKI--WDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCA 353 (406)
T ss_pred EecccccCc-----chhhccCCCCCccEEEeecccceEEE--EeccCCeEEEEEecccceeeeeEEcCCCeEEEEEe
Confidence 222222122 12222223345567777776654445 56667865433322 22234456777776655333
No 342
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=97.05 E-value=0.032 Score=59.27 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=102.1
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+...++..+.||||++|||..-. ...+|.+...+ ...+..+....... -....+.|+-|+.++++.+..
T Consensus 381 ~~~nIs~~aiSPdg~~Ia~st~~---~~~iy~L~~~~-~vk~~~v~~~~~~~----~~a~~i~ftid~~k~~~~s~~--- 449 (691)
T KOG2048|consen 381 EKENISCAAISPDGNLIAISTVS---RTKIYRLQPDP-NVKVINVDDVPLAL----LDASAISFTIDKNKLFLVSKN--- 449 (691)
T ss_pred CccceeeeccCCCCCEEEEeecc---ceEEEEeccCc-ceeEEEeccchhhh----ccceeeEEEecCceEEEEecc---
Confidence 44678999999999999996432 22466665322 22232221111000 011578899999999887621
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec---CCCCCCccceEEEecCCCC
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK---GIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~---~~~~~~~~~~~~~spdg~~ 197 (715)
...|.+.+++++....+. .+...-.+..+.-||||+.
T Consensus 450 ----------------------------------------~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~y 489 (691)
T KOG2048|consen 450 ----------------------------------------IFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNY 489 (691)
T ss_pred ----------------------------------------cceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCE
Confidence 155777777776544432 1222335678889999998
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-CCCccccceeEcCC-CCeE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPD-GKFL 275 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~spd-g~~l 275 (715)
|+... ....|+++++ ++++.+.|. ......+...++|. -+.|
T Consensus 490 ----iaa~~---------------t~g~I~v~nl-----------------~~~~~~~l~~rln~~vTa~~~~~~~~~~l 533 (691)
T KOG2048|consen 490 ----IAAIS---------------TRGQIFVYNL-----------------ETLESHLLKVRLNIDVTAAAFSPFVRNRL 533 (691)
T ss_pred ----EEEEe---------------ccceEEEEEc-----------------ccceeecchhccCcceeeeeccccccCcE
Confidence 88775 3347999998 777777665 33455677778854 4456
Q ss_pred EEEecCCCCCCCCccccceeEeeecCC
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
+....+ .++|.+|+..
T Consensus 534 vvats~-----------nQv~efdi~~ 549 (691)
T KOG2048|consen 534 VVATSN-----------NQVFEFDIEA 549 (691)
T ss_pred EEEecC-----------CeEEEEecch
Confidence 554433 3688888844
No 343
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=97.04 E-value=0.073 Score=54.71 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=55.0
Q ss_pred cCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
.....+++|.++..+..+. +. +....-++|||||.. |+..+ .++.||++.++
T Consensus 426 ~~G~w~V~d~e~~~lv~~~-~d-~~~ls~v~ysp~G~~----lAvgs---------------~d~~iyiy~Vs------- 477 (626)
T KOG2106|consen 426 ATGRWFVLDTETQDLVTIH-TD-NEQLSVVRYSPDGAF----LAVGS---------------HDNHIYIYRVS------- 477 (626)
T ss_pred ccceEEEEecccceeEEEE-ec-CCceEEEEEcCCCCE----EEEec---------------CCCeEEEEEEC-------
Confidence 3477899999987776662 33 667888999999998 88765 22355555441
Q ss_pred hhhhhccCCCCC-CceecCCCC-ccccceeEcCCCCeEEEEe
Q 005093 240 ELELKESSSEDL-PVVNLTESI-SSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 240 ~~~~~~~~~~~~-~~~~lt~~~-~~~~~~~~spdg~~l~~~~ 279 (715)
++| ...++-.-. ..+....||+|+++|.-.+
T Consensus 478 ---------~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S 510 (626)
T KOG2106|consen 478 ---------ANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNS 510 (626)
T ss_pred ---------CCCcEEEEeeeecCceeEEeeecCCCceEEecc
Confidence 333 333332211 4578899999999886444
No 344
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=97.02 E-value=0.036 Score=53.14 Aligned_cols=260 Identities=12% Similarity=0.051 Sum_probs=132.6
Q ss_pred ccccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCcc
Q 005093 2 FSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQL 79 (715)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~ 79 (715)
|..+.+=+-...++..|+++++.++-++.-.++... +.+....|++||+.|+-...+. .+..| ..|+.
T Consensus 55 F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHs-----gAVM~l~~~~d~s~i~S~gtDk-----~v~~wD~~tG~~ 124 (338)
T KOG0265|consen 55 FHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHS-----GAVMELHGMRDGSHILSCGTDK-----TVRGWDAETGKR 124 (338)
T ss_pred ECCCCCeEeecCCcceEEEEeccccccceeeecccc-----ceeEeeeeccCCCEEEEecCCc-----eEEEEeccccee
Confidence 444555556666777888887877776665555444 7899999999999998664442 34445 55655
Q ss_pred EEEEecCccccccccCC--CcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccC
Q 005093 80 EKEFHVPQTVHGSVYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYA 157 (715)
Q Consensus 80 ~~~~~~~~~~~~~~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 157 (715)
.+........-+.+.+. +.+.-.+=|+||+-=++=.... ....++. ..-....+.|.....+...
T Consensus 125 ~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k-~~~~t~~------------~kyqltAv~f~d~s~qv~s 191 (338)
T KOG0265|consen 125 IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKK-EAIKTFE------------NKYQLTAVGFKDTSDQVIS 191 (338)
T ss_pred eehhccccceeeecCccccCCeEEEecCCCceEEEEeeccc-chhhccc------------cceeEEEEEecccccceee
Confidence 54433221110000000 1112234455555443321110 0000100 0000112223222122222
Q ss_pred CccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 158 GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 158 ~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
+--.+.|-+||+..++..-+. .-....+..+..||+|.. ++-.+-. +.+-++|+-
T Consensus 192 ggIdn~ikvWd~r~~d~~~~l-sGh~DtIt~lsls~~gs~----llsnsMd---------------~tvrvwd~r----- 246 (338)
T KOG0265|consen 192 GGIDNDIKVWDLRKNDGLYTL-SGHADTITGLSLSRYGSF----LLSNSMD---------------NTVRVWDVR----- 246 (338)
T ss_pred ccccCceeeeccccCcceEEe-ecccCceeeEEeccCCCc----ccccccc---------------ceEEEEEec-----
Confidence 223478999999776655441 222235778899999998 7765421 234444430
Q ss_pred hhhhhhhccCCCCCCc-eecCCC-----CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccc
Q 005093 238 ASELELKESSSEDLPV-VNLTES-----ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 311 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~-~~lt~~-----~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~ 311 (715)
+ -..++. ..+... +...-.-+|||+++++-+.+.+. .+|++|..+......
T Consensus 247 -----p----~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr-----------~vyvwd~~~r~~lyk--- 303 (338)
T KOG0265|consen 247 -----P----FAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADR-----------FVYVWDTTSRRILYK--- 303 (338)
T ss_pred -----c----cCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccc-----------eEEEeecccccEEEE---
Confidence 0 012221 222221 12345578999999997776553 488888554332110
Q ss_pred eeeeeeceecCCCCCccccccCCCCCCccccCCCEEE
Q 005093 312 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 348 (715)
Q Consensus 312 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~ 348 (715)
.|| +.+++..+.|.|....|+
T Consensus 304 ---------------lpG-h~gsvn~~~Fhp~e~iil 324 (338)
T KOG0265|consen 304 ---------------LPG-HYGSVNEVDFHPTEPIIL 324 (338)
T ss_pred ---------------cCC-cceeEEEeeecCCCcEEE
Confidence 222 223566778888876443
No 345
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.98 E-value=0.005 Score=64.47 Aligned_cols=135 Identities=16% Similarity=0.245 Sum_probs=75.4
Q ss_pred cccccceEEEEEEEeecCCCCccccccCC-CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe---cCCccEEEEe
Q 005093 9 LLANKRKKFMLSTVISKENENSVTFQWAP-FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFH 84 (715)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~ 84 (715)
.-.+..+-.||.+ ..++......|... ++.+...+....|.|=..-++-++..+ -...+| .....-++..
T Consensus 645 Va~ddg~i~lWr~--~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd----~Ti~lWDl~~~~~~~~l~g 718 (1012)
T KOG1445|consen 645 VATDDGQINLWRL--TANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYD----STIELWDLANAKLYSRLVG 718 (1012)
T ss_pred ecccCceEEEEEe--ccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhcc----ceeeeeehhhhhhhheecc
Confidence 3445566688884 44443223222222 444445677777777554444333322 234455 2222223332
Q ss_pred cCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceE
Q 005093 85 VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSL 164 (715)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 164 (715)
....+ -+++|||||++||-++.+ ..|
T Consensus 719 HtdqI----------f~~AWSpdGr~~AtVcKD--------------------------------------------g~~ 744 (1012)
T KOG1445|consen 719 HTDQI----------FGIAWSPDGRRIATVCKD--------------------------------------------GTL 744 (1012)
T ss_pred CcCce----------eEEEECCCCcceeeeecC--------------------------------------------ceE
Confidence 22222 589999999999998654 457
Q ss_pred EEEEccCCceEeec-CCCCCCccceEEEecCCCCCccEEEEEee
Q 005093 165 FVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGW 207 (715)
Q Consensus 165 ~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~~~~~i~~~~~ 207 (715)
+|+.+..++..... ..+.......+.|.=||+. |+.++-
T Consensus 745 rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~----viv~Gf 784 (1012)
T KOG1445|consen 745 RVYEPRSREQPVYEGKGPVGTRGARILWACDGRI----VIVVGF 784 (1012)
T ss_pred EEeCCCCCCCccccCCCCccCcceeEEEEecCcE----EEEecc
Confidence 88887766543331 1222334456789999997 777663
No 346
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=96.98 E-value=0.042 Score=53.24 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=68.8
Q ss_pred CCcccCCcCcccCCccCceEEEEEc-cCCceEeecC--CC---C-CCccceEEEecCCCCCccEEEEEeecCccceeeee
Q 005093 145 QGDWEEDWGETYAGKRQPSLFVINI-NSGEVQAVKG--IP---K-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 217 (715)
Q Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~~-~~g~~~~l~~--~~---~-~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~ 217 (715)
.+.|.+| |+.+...-...|.++|. ..|.--.+.. +. + ...+..++|||-..++ ++.-+
T Consensus 163 sL~Fs~D-GeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~---~a~gs----------- 227 (406)
T KOG2919|consen 163 SLQFSPD-GEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKT---LAVGS----------- 227 (406)
T ss_pred eEEecCC-CCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcc---eeeec-----------
Confidence 4457888 66666556688999998 4554222210 11 1 1235678899955541 45443
Q ss_pred eeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEe
Q 005093 218 YCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 297 (715)
Q Consensus 218 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~ 297 (715)
+.....||.-+ ..+....|-...+.+....|-+||++|+--+..+ ..|..
T Consensus 228 --Y~q~~giy~~~------------------~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~----------dkIl~ 277 (406)
T KOG2919|consen 228 --YGQRVGIYNDD------------------GRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKD----------DKILC 277 (406)
T ss_pred --ccceeeeEecC------------------CCCceeeecccCCCeeeEEeccCcCeecccccCC----------CeEEE
Confidence 12223566665 4555566667778899999999999885433332 34777
Q ss_pred eecCC
Q 005093 298 IDWPT 302 (715)
Q Consensus 298 ~~~~~ 302 (715)
+|+..
T Consensus 278 WDiR~ 282 (406)
T KOG2919|consen 278 WDIRY 282 (406)
T ss_pred Eeehh
Confidence 77654
No 347
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.97 E-value=0.0044 Score=61.26 Aligned_cols=117 Identities=19% Similarity=0.344 Sum_probs=79.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhC---C------cEEEEEcCCCCCCCchhhhhc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV---G------YSLLIVNYRGSLGFGEEALQS 531 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~---G------~~vi~~d~rG~~~~g~~~~~~ 531 (715)
.|+.+|-.-..|+..+..++.-.++++||.|++ ...|...+..|... | |.|++|..+| ||-+-.
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGs--v~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPG---ygwSd~-- 204 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGS--VREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPG---YGWSDA-- 204 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCch--HHHHHhhhhhhcCccccCCccceeEEEeccCCCC---cccCcC--
Confidence 688888776666643333444448889998776 44565666666443 3 7899999999 654431
Q ss_pred CCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEE
Q 005093 532 LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAA 588 (715)
Q Consensus 532 ~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 588 (715)
+...|-. ...++..++-|.=+ +.-++..|-|.-+|..++..+|..+|+.+.+.
T Consensus 205 -~sk~GFn-~~a~ArvmrkLMlR--Lg~nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 205 -PSKTGFN-AAATARVMRKLMLR--LGYNKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred -CccCCcc-HHHHHHHHHHHHHH--hCcceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 2222322 44555555555444 34588999999999999999999999987764
No 348
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.91 E-value=0.012 Score=53.30 Aligned_cols=143 Identities=24% Similarity=0.290 Sum_probs=78.1
Q ss_pred hhhhccccc-eeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch------------
Q 005093 434 VKSLLSSRQ-FSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS------------ 500 (715)
Q Consensus 434 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~------------ 500 (715)
+..+|+... +....||+... ...+. .+++..+++ -..+..++|+|||.+....+ .|.
T Consensus 62 VYeLLEk~c~Lkr~~ip~d~~-------e~E~~-SFiF~s~~~-lt~~~kLlVLIHGSGvVrAG-QWARrLIIN~~Ld~G 131 (297)
T KOG3967|consen 62 VYELLEKDCNLKRVSIPVDAT-------ESEPK-SFIFMSEDA-LTNPQKLLVLIHGSGVVRAG-QWARRLIINEDLDSG 131 (297)
T ss_pred HHHHHHhcCCceeEeecCCCC-------CCCCc-ceEEEChhH-hcCccceEEEEecCceEecc-hHhhhhhhccccccC
Confidence 344555444 45566665431 11122 234444432 33456689999996543311 111
Q ss_pred ---HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHH
Q 005093 501 ---KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHL 577 (715)
Q Consensus 501 ---~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 577 (715)
+.+....+.||.|++.+.--...+-....+ +..+-...++.+.-.-..++.. .....|+++.||+||+.++.+
T Consensus 132 TQiPyi~rAv~~Gygviv~N~N~~~kfye~k~n--p~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l 207 (297)
T KOG3967|consen 132 TQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN--PQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDL 207 (297)
T ss_pred CcChHHHHHHHcCCcEEEeCCchhhhhhhcccC--cchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHH
Confidence 234455689999999885422222111111 1112222344444444444433 356889999999999999999
Q ss_pred HhhCCC--ceeEEEe
Q 005093 578 IGQAPD--KFVAAAA 590 (715)
Q Consensus 578 a~~~p~--~~~~~v~ 590 (715)
+.+.|+ ++.++++
T Consensus 208 ~~~f~~d~~v~aial 222 (297)
T KOG3967|consen 208 VERFPDDESVFAIAL 222 (297)
T ss_pred HHhcCCccceEEEEe
Confidence 998875 4444443
No 349
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.90 E-value=0.2 Score=48.54 Aligned_cols=93 Identities=8% Similarity=0.014 Sum_probs=51.9
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-CCcccceeeeeeceecCCCCCccccccCCCCCCcc
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 340 (715)
.....+|+|....|++...++. -.||.++...... ..++..... ..+.+...+..+.+
T Consensus 182 GfEGlA~d~~~~~l~~aKEr~P---------~~I~~~~~~~~~l~~~~~~~~~~------------~~~~f~~DvSgl~~ 240 (316)
T COG3204 182 GFEGLAWDPVDHRLFVAKERNP---------IGIFEVTQSPSSLSVHASLDPTA------------DRDLFVLDVSGLEF 240 (316)
T ss_pred CceeeecCCCCceEEEEEccCC---------cEEEEEecCCcccccccccCccc------------ccceEeecccccee
Confidence 4778999999999999988763 3477776322111 111111000 11122234556667
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC
Q 005093 341 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES 377 (715)
Q Consensus 341 ~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~ 377 (715)
.+....+++.+.+. ..|..+|+++.-+..+....+
T Consensus 241 ~~~~~~LLVLS~ES--r~l~Evd~~G~~~~~lsL~~g 275 (316)
T COG3204 241 NAITNSLLVLSDES--RRLLEVDLSGEVIELLSLTKG 275 (316)
T ss_pred cCCCCcEEEEecCC--ceEEEEecCCCeeeeEEeccC
Confidence 66555677766543 478888885444555544333
No 350
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=96.88 E-value=0.021 Score=57.07 Aligned_cols=115 Identities=17% Similarity=0.109 Sum_probs=70.0
Q ss_pred CCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcc
Q 005093 249 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 328 (715)
Q Consensus 249 ~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~ 328 (715)
.+...+.-.+..+.+.++..|+||..|.-.+.++ .|-++|+.+.+.+...... .|.
T Consensus 330 Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd-----------tl~viDlRt~eI~~~~sA~-------------g~k 385 (459)
T KOG0288|consen 330 RSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD-----------TLKVIDLRTKEIRQTFSAE-------------GFK 385 (459)
T ss_pred cCCceeeEeecCcceeeEeeccCCeEEeeecCCC-----------ceeeeecccccEEEEeecc-------------ccc
Confidence 4555444444455788899999999987664443 3778888886653321111 000
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-C--ceeEEEeecCCEEE
Q 005093 329 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-N--FSWSLLTLDGDNII 392 (715)
Q Consensus 329 g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~--~~~~~~s~~~~~l~ 392 (715)
-.......+||||+++++..+. ...+|.|++.+|+++.+..... + +....|++.|..++
T Consensus 386 --~asDwtrvvfSpd~~YvaAGS~---dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Ll 447 (459)
T KOG0288|consen 386 --CASDWTRVVFSPDGSYVAAGSA---DGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLL 447 (459)
T ss_pred --cccccceeEECCCCceeeeccC---CCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhh
Confidence 0012457789999997665443 3478888888999888765544 2 23345566555544
No 351
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=96.83 E-value=0.024 Score=58.43 Aligned_cols=77 Identities=10% Similarity=0.142 Sum_probs=51.1
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|-+|...+--...+ ......+..++|.|++.. ++|+.. .+++.-.|.
T Consensus 126 G~iKiWSrsGMLRStl--~Q~~~~v~c~~W~p~S~~----vl~c~g----------------~h~~IKpL~--------- 174 (737)
T KOG1524|consen 126 GVIKIWSRSGMLRSTV--VQNEESIRCARWAPNSNS----IVFCQG----------------GHISIKPLA--------- 174 (737)
T ss_pred ceEEEEeccchHHHHH--hhcCceeEEEEECCCCCc----eEEecC----------------CeEEEeecc---------
Confidence 5577777644333333 334456788999999999 999861 267766651
Q ss_pred hhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 242 ELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
....+.+--.+++-+-...|+|..+-|+
T Consensus 175 -------~n~k~i~WkAHDGiiL~~~W~~~s~lI~ 202 (737)
T KOG1524|consen 175 -------ANSKIIRWRAHDGLVLSLSWSTQSNIIA 202 (737)
T ss_pred -------cccceeEEeccCcEEEEeecCcccccee
Confidence 2334444555677788889999888665
No 352
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.83 E-value=0.44 Score=50.24 Aligned_cols=211 Identities=15% Similarity=0.139 Sum_probs=123.7
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
....+.+++|.+++ +.+. +...+..++ ............... ..+.++||+++++..-...
T Consensus 76 p~~i~v~~~~~~vy-v~~~--~~~~v~vid~~~~~~~~~~~vG~~P----------~~~~~~~~~~~vYV~n~~~----- 137 (381)
T COG3391 76 PAGVAVNPAGNKVY-VTTG--DSNTVSVIDTATNTVLGSIPVGLGP----------VGLAVDPDGKYVYVANAGN----- 137 (381)
T ss_pred ccceeeCCCCCeEE-EecC--CCCeEEEEcCcccceeeEeeeccCC----------ceEEECCCCCEEEEEeccc-----
Confidence 45567888888764 4343 233566665 332222222222233 6899999999997752210
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
....+.++|.+++++... .+........+++|+|+. ++
T Consensus 138 ------------------------------------~~~~vsvid~~t~~~~~~--~~vG~~P~~~a~~p~g~~----vy 175 (381)
T COG3391 138 ------------------------------------GNNTVSVIDAATNKVTAT--IPVGNTPTGVAVDPDGNK----VY 175 (381)
T ss_pred ------------------------------------CCceEEEEeCCCCeEEEE--EecCCCcceEEECCCCCe----EE
Confidence 137789999988876655 222223377899999996 44
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee-----cCCCCccccceeEcCCCCeEEEE
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-----LTESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----lt~~~~~~~~~~~spdg~~l~~~ 278 (715)
..+. ..+.|..+|. ++....+ ............++|||++++..
T Consensus 176 -v~~~-------------~~~~v~vi~~-----------------~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~ 224 (381)
T COG3391 176 -VTNS-------------DDNTVSVIDT-----------------SGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVA 224 (381)
T ss_pred -EEec-------------CCCeEEEEeC-----------------CCcceeccccccccccCCCCceEEECCCCCEEEEE
Confidence 4432 2246888885 4444433 11222345778999999977554
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
-..+ ....+..+|..++......... .. . ........|+|+.++..... ...
T Consensus 225 ~~~~--------~~~~v~~id~~~~~v~~~~~~~---------~~-------~--~~~~v~~~p~g~~~yv~~~~--~~~ 276 (381)
T COG3391 225 NDGS--------GSNNVLKIDTATGNVTATDLPV---------GS-------G--APRGVAVDPAGKAAYVANSQ--GGT 276 (381)
T ss_pred eccC--------CCceEEEEeCCCceEEEecccc---------cc-------C--CCCceeECCCCCEEEEEecC--CCe
Confidence 4432 1245788887775542210000 00 0 12345678999977776554 457
Q ss_pred EEEEECCCCcEEEecC
Q 005093 359 IISVNVSSGELLRITP 374 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~ 374 (715)
++.+|..+..+.....
T Consensus 277 V~vid~~~~~v~~~~~ 292 (381)
T COG3391 277 VSVIDGATDRVVKTGP 292 (381)
T ss_pred EEEEeCCCCceeeeec
Confidence 8888988777666543
No 353
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=96.81 E-value=0.023 Score=56.01 Aligned_cols=130 Identities=16% Similarity=0.163 Sum_probs=74.1
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCC
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYAD 96 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (715)
.||++|+.+=..-.+--|+.|-+ .+..+.++++++.+|||=.....+ +++..+ .-..+.+.... .| +
T Consensus 107 ~IyIydI~~MklLhTI~t~~~n~---~gl~AlS~n~~n~ylAyp~s~t~G--dV~l~d-~~nl~~v~~I~--aH-----~ 173 (391)
T KOG2110|consen 107 SIYIYDIKDMKLLHTIETTPPNP---KGLCALSPNNANCYLAYPGSTTSG--DVVLFD-TINLQPVNTIN--AH-----K 173 (391)
T ss_pred cEEEEecccceeehhhhccCCCc---cceEeeccCCCCceEEecCCCCCc--eEEEEE-cccceeeeEEE--ec-----C
Confidence 47777776544322222221211 345667778888899997555323 343333 22222322221 11 1
Q ss_pred CcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-
Q 005093 97 GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ- 175 (715)
Q Consensus 97 ~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~- 175 (715)
+.+..++|||||+.||-.++.. ..|.|+....|+..
T Consensus 174 ~~lAalafs~~G~llATASeKG-------------------------------------------TVIRVf~v~~G~kl~ 210 (391)
T KOG2110|consen 174 GPLAALAFSPDGTLLATASEKG-------------------------------------------TVIRVFSVPEGQKLY 210 (391)
T ss_pred CceeEEEECCCCCEEEEeccCc-------------------------------------------eEEEEEEcCCccEee
Confidence 1237999999999999976642 45677777666532
Q ss_pred eec-CCCCCCccceEEEecCCCCCccEEEEEee
Q 005093 176 AVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGW 207 (715)
Q Consensus 176 ~l~-~~~~~~~~~~~~~spdg~~~~~~i~~~~~ 207 (715)
... |+. ...+.+++||||++. |.-+++
T Consensus 211 eFRRG~~-~~~IySL~Fs~ds~~----L~~sS~ 238 (391)
T KOG2110|consen 211 EFRRGTY-PVSIYSLSFSPDSQF----LAASSN 238 (391)
T ss_pred eeeCCce-eeEEEEEEECCCCCe----EEEecC
Confidence 221 111 335778999999998 777763
No 354
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=96.75 E-value=0.49 Score=47.20 Aligned_cols=128 Identities=17% Similarity=0.160 Sum_probs=76.9
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCcccc
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAF 264 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~ 264 (715)
.+.++.|++ .. .+|+...+ -.|-+.||. .++....++.. ....
T Consensus 262 ~Vs~V~w~d--~~----v~yS~SwD--------------HTIk~WDle----------------tg~~~~~~~~~-ksl~ 304 (423)
T KOG0313|consen 262 PVSSVVWSD--AT----VIYSVSWD--------------HTIKVWDLE----------------TGGLKSTLTTN-KSLN 304 (423)
T ss_pred ceeeEEEcC--CC----ceEeeccc--------------ceEEEEEee----------------cccceeeeecC-ccee
Confidence 577889998 34 56665221 257788871 33444455543 3466
Q ss_pred ceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCC
Q 005093 265 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 344 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg 344 (715)
....+|+.+.|+-.+.+ .+|.++|-.++........ |-| +..-+..+.|+|.+
T Consensus 305 ~i~~~~~~~Ll~~gssd-----------r~irl~DPR~~~gs~v~~s---------------~~g-H~nwVssvkwsp~~ 357 (423)
T KOG0313|consen 305 CISYSPLSKLLASGSSD-----------RHIRLWDPRTGDGSVVSQS---------------LIG-HKNWVSSVKWSPTN 357 (423)
T ss_pred EeecccccceeeecCCC-----------CceeecCCCCCCCceeEEe---------------eec-chhhhhheecCCCC
Confidence 68889988877655444 3577788766543211100 111 11124567799999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEecCCC
Q 005093 345 CTMLLSSIWGSSQVIISVNVSSGELLRITPAE 376 (715)
Q Consensus 345 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~ 376 (715)
.+.+++...++...||-+.-..+....|....
T Consensus 358 ~~~~~S~S~D~t~klWDvRS~k~plydI~~h~ 389 (423)
T KOG0313|consen 358 EFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHN 389 (423)
T ss_pred ceEEEEEecCCeEEEEEeccCCCcceeeccCC
Confidence 99999988888788876554444555665543
No 355
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.73 E-value=0.15 Score=55.44 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=25.1
Q ss_pred CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 259 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 259 ~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
-........+||||++++.+...+ .++-++|+.+.+
T Consensus 319 VGKsPHGV~vSPDGkylyVanklS----------~tVSVIDv~k~k 354 (635)
T PRK02888 319 VPKNPHGVNTSPDGKYFIANGKLS----------PTVTVIDVRKLD 354 (635)
T ss_pred CCCCccceEECCCCCEEEEeCCCC----------CcEEEEEChhhh
Confidence 344567789999999886555443 357888877643
No 356
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=96.72 E-value=0.095 Score=53.28 Aligned_cols=96 Identities=11% Similarity=0.083 Sum_probs=49.8
Q ss_pred ccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 291 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 291 ~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
....|+++++..+++.......+.+.+.. +......|- ..++-.|..+ ++.+.++.|..+||.+.-.-....
T Consensus 346 dnG~IaLWs~~KKkplf~~~~AHgv~~~~----~~~~~~~Wi---tsla~i~~sd-L~asGS~~G~vrLW~i~~g~r~i~ 417 (479)
T KOG0299|consen 346 DNGSIALWSLLKKKPLFTSRLAHGVIPEL----DPVNGNFWI---TSLAVIPGSD-LLASGSWSGCVRLWKIEDGLRAIN 417 (479)
T ss_pred CCceEEEeeecccCceeEeeccccccCCc----cccccccce---eeeEecccCc-eEEecCCCCceEEEEecCCccccc
Confidence 34468888887776644433333322211 000000121 2223344444 888888899999999875434444
Q ss_pred EecCCC--CCceeEEEeecCCEEEEE
Q 005093 371 RITPAE--SNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 371 ~l~~~~--~~~~~~~~s~~~~~l~~~ 394 (715)
.+..-. +-+....|+.+|.++++.
T Consensus 418 ~l~~ls~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 418 LLYSLSLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred eeeecccccEEEEEEEccCCCEEEEe
Confidence 443322 222334567777766554
No 357
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.69 E-value=0.013 Score=62.86 Aligned_cols=134 Identities=19% Similarity=0.163 Sum_probs=73.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc---------ch--------HHHHHHHhCCcEEEEEcCCCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS---------YS--------KSLAFLSSVGYSLLIVNYRGSLG 523 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~---------~~--------~~~~~la~~G~~vi~~d~rG~~~ 523 (715)
.+..+.-|++...+ ..++.|+||++.|||+.+.... .. ....-+ .+-..++.+|.+-..|
T Consensus 22 ~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW-~~~an~l~iD~PvGtG 98 (415)
T PF00450_consen 22 ENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSW-NKFANLLFIDQPVGTG 98 (415)
T ss_dssp TTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-G-GGTSEEEEE--STTST
T ss_pred CCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccc-ccccceEEEeecCceE
Confidence 45677777776553 5577899999999998653210 00 000011 1226788899775555
Q ss_pred CchhhhhcCCCCCCccchhhHHHHHHHHHH-cCCCCCceEEEEEeChhHHHHHHHHhh----C------CCceeEEEecC
Q 005093 524 FGEEALQSLPGKVGSQDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQ----A------PDKFVAAAARN 592 (715)
Q Consensus 524 ~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~----~------p~~~~~~v~~~ 592 (715)
|.................+|+..++..... .+.....+++|+|.|+||..+-.+|.. . +-.++++++.+
T Consensus 99 fS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGn 178 (415)
T PF00450_consen 99 FSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGN 178 (415)
T ss_dssp T-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEES
T ss_pred EeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecC
Confidence 544322111001112235566666554433 344566799999999999987666532 2 23589999999
Q ss_pred Ccchh
Q 005093 593 PLCNL 597 (715)
Q Consensus 593 ~~~~~ 597 (715)
|+++.
T Consensus 179 g~~dp 183 (415)
T PF00450_consen 179 GWIDP 183 (415)
T ss_dssp E-SBH
T ss_pred ccccc
Confidence 98765
No 358
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=96.67 E-value=0.037 Score=55.04 Aligned_cols=152 Identities=10% Similarity=0.055 Sum_probs=93.1
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEE----ecCccccccccCCCcccceeecCCCCeEEE
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEF----HVPQTVHGSVYADGWFEGISWNSDETLIAY 113 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~wSpDg~~la~ 113 (715)
++.+.+.+....|.|-...+.-. -.++-..-+|.++.++..+.++ .+. +....| .-+.|.|--..+++
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIAS-gSeD~~v~vW~IPe~~l~~~ltepvv~L~-gH~rrV------g~V~wHPtA~NVLl 148 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIAS-GSEDTKVMVWQIPENGLTRDLTEPVVELY-GHQRRV------GLVQWHPTAPNVLL 148 (472)
T ss_pred ccCccccccccccCccCCceeec-CCCCceEEEEECCCcccccCcccceEEEe-ecceeE------EEEeecccchhhHh
Confidence 55667889999999977665422 2221333466666665544433 221 111222 67889998777766
Q ss_pred EeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec
Q 005093 114 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp 193 (715)
.+. ..+.+.+|++.||+...- ......+.++.|+-
T Consensus 149 sag-------------------------------------------~Dn~v~iWnv~tgeali~--l~hpd~i~S~sfn~ 183 (472)
T KOG0303|consen 149 SAG-------------------------------------------SDNTVSIWNVGTGEALIT--LDHPDMVYSMSFNR 183 (472)
T ss_pred hcc-------------------------------------------CCceEEEEeccCCceeee--cCCCCeEEEEEecc
Confidence 532 238899999999985432 23555788999999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-CCCc-cccceeEcCC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESIS-SAFFPRFSPD 271 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~-~~~~~~~spd 271 (715)
||.. ++.+. ++-.|-++|. ..++...-- .+.+ ......|..+
T Consensus 184 dGs~----l~Ttc---------------kDKkvRv~dp-----------------r~~~~v~e~~~heG~k~~Raifl~~ 227 (472)
T KOG0303|consen 184 DGSL----LCTTC---------------KDKKVRVIDP-----------------RRGTVVSEGVAHEGAKPARAIFLAS 227 (472)
T ss_pred CCce----eeeec---------------ccceeEEEcC-----------------CCCcEeeecccccCCCcceeEEecc
Confidence 9998 77765 2235777775 444433222 2333 2556788888
Q ss_pred CCeEEEEe
Q 005093 272 GKFLVFLS 279 (715)
Q Consensus 272 g~~l~~~~ 279 (715)
|+ |+-+.
T Consensus 228 g~-i~tTG 234 (472)
T KOG0303|consen 228 GK-IFTTG 234 (472)
T ss_pred Cc-eeeec
Confidence 88 54443
No 359
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.66 E-value=0.15 Score=49.62 Aligned_cols=171 Identities=11% Similarity=0.184 Sum_probs=86.4
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
++++|.||.+.|+.+.+.. ..|+.+++++.-.+.+.
T Consensus 25 SGLTy~pd~~tLfaV~d~~-------------------------------------------~~i~els~~G~vlr~i~- 60 (248)
T PF06977_consen 25 SGLTYNPDTGTLFAVQDEP-------------------------------------------GEIYELSLDGKVLRRIP- 60 (248)
T ss_dssp EEEEEETTTTEEEEEETTT-------------------------------------------TEEEEEETT--EEEEEE-
T ss_pred cccEEcCCCCeEEEEECCC-------------------------------------------CEEEEEcCCCCEEEEEe-
Confidence 8999999999998876542 66899998765555553
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-----ce
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VV 254 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 254 (715)
..+......+++.-+|+ ++.+. .++..|+.++++. .+.. .+
T Consensus 61 l~g~~D~EgI~y~g~~~-----~vl~~--------------Er~~~L~~~~~~~---------------~~~~~~~~~~~ 106 (248)
T PF06977_consen 61 LDGFGDYEGITYLGNGR-----YVLSE--------------ERDQRLYIFTIDD---------------DTTSLDRADVQ 106 (248)
T ss_dssp -SS-SSEEEEEE-STTE-----EEEEE--------------TTTTEEEEEEE-------------------TT--EEEEE
T ss_pred CCCCCCceeEEEECCCE-----EEEEE--------------cCCCcEEEEEEec---------------cccccchhhce
Confidence 23333455677776554 34333 2445788877620 1111 11
Q ss_pred ecC-----CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 255 NLT-----ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 255 ~lt-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
.++ .........+|+|.++.|+.+..+.. ..||.++...+.. .+.... ...+. . ..
T Consensus 107 ~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P---------~~l~~~~~~~~~~-~~~~~~--~~~~~---~----~~ 167 (248)
T PF06977_consen 107 KISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKP---------KRLYEVNGFPGGF-DLFVSD--DQDLD---D----DK 167 (248)
T ss_dssp EEE---S---SS--EEEEEETTTTEEEEEEESSS---------EEEEEEESTT-SS---EEEE---HHHH--------HT
T ss_pred EEecccccCCCcceEEEEEcCCCCEEEEEeCCCC---------hhhEEEccccCcc-ceeecc--ccccc---c----cc
Confidence 121 12234788999999999988876542 3477776522111 110000 00000 0 00
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
.....+..+.+.|....+++.+... ..|..+|. +|++.
T Consensus 168 ~~~~d~S~l~~~p~t~~lliLS~es--~~l~~~d~-~G~~~ 205 (248)
T PF06977_consen 168 LFVRDLSGLSYDPRTGHLLILSDES--RLLLELDR-QGRVV 205 (248)
T ss_dssp --SS---EEEEETTTTEEEEEETTT--TEEEEE-T-T--EE
T ss_pred ceeccccceEEcCCCCeEEEEECCC--CeEEEECC-CCCEE
Confidence 0111334555677766787776543 47888886 45543
No 360
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=96.62 E-value=0.057 Score=51.93 Aligned_cols=147 Identities=16% Similarity=0.137 Sum_probs=77.0
Q ss_pred ceEEEEEccCCceEe-ecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~-l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|-++|.......+ .+-......+..++|.|.|.. |+..+.. .-+.++|+
T Consensus 194 ~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGef----llvgTdH---------------p~~rlYdv--------- 245 (430)
T KOG0640|consen 194 NTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEF----LLVGTDH---------------PTLRLYDV--------- 245 (430)
T ss_pred CeEEEEecccHHHHHHHHHhhccceeeeEeecCCCce----EEEecCC---------------CceeEEec---------
Confidence 557777775433221 110233346778899999997 7765522 13445554
Q ss_pred hhhhccCCCCCCceecCC----CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeee
Q 005093 241 LELKESSSEDLPVVNLTE----SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 316 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~----~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~ 316 (715)
++-+.-.-.+ ..+.+..+.+|+.|+ |+.+...+ | .|.++|--+ .+.+..-.
T Consensus 246 --------~T~QcfvsanPd~qht~ai~~V~Ys~t~~-lYvTaSkD----G------~IklwDGVS--~rCv~t~~---- 300 (430)
T KOG0640|consen 246 --------NTYQCFVSANPDDQHTGAITQVRYSSTGS-LYVTASKD----G------AIKLWDGVS--NRCVRTIG---- 300 (430)
T ss_pred --------cceeEeeecCcccccccceeEEEecCCcc-EEEEeccC----C------cEEeecccc--HHHHHHHH----
Confidence 3333211111 233578899999998 55555443 2 366666332 22221100
Q ss_pred eceecCCCCCcccccc-CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC
Q 005093 317 PVVQCAEGDCFPGLYS-SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE 376 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~ 376 (715)
..+. ..+....|+.||++|+- +..+....|| .+.||+....-.+.
T Consensus 301 ------------~AH~gsevcSa~Ftkn~kyiLs-SG~DS~vkLW--Ei~t~R~l~~YtGA 346 (430)
T KOG0640|consen 301 ------------NAHGGSEVCSAVFTKNGKYILS-SGKDSTVKLW--EISTGRMLKEYTGA 346 (430)
T ss_pred ------------hhcCCceeeeEEEccCCeEEee-cCCcceeeee--eecCCceEEEEecC
Confidence 0011 13456679999986654 3333444455 55577766554444
No 361
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=96.60 E-value=0.095 Score=55.69 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=38.9
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
.+...++-|||+.|.....+ .++..+ +|+....+-.....+ ..++||.||+++|-.+.
T Consensus 14 ci~d~afkPDGsqL~lAAg~-----rlliyD~ndG~llqtLKgHKDtV----------ycVAys~dGkrFASG~a 73 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGS-----RLLVYDTSDGTLLQPLKGHKDTV----------YCVAYAKDGKRFASGSA 73 (1081)
T ss_pred chheeEECCCCceEEEecCC-----EEEEEeCCCcccccccccccceE----------EEEEEccCCceeccCCC
Confidence 47788999999999876443 466666 444444433222222 68999999998876543
No 362
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=96.54 E-value=0.029 Score=58.04 Aligned_cols=77 Identities=23% Similarity=0.267 Sum_probs=49.3
Q ss_pred cCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCC
Q 005093 256 LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSI 335 (715)
Q Consensus 256 lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~ 335 (715)
..-..+.+...+|||||++||.++.+. . |.++|..+.+..-+.. -|-.+.
T Consensus 286 w~~~~g~in~f~FS~DG~~LA~VSqDG---------f--LRvF~fdt~eLlg~mk-------------------SYFGGL 335 (636)
T KOG2394|consen 286 WHIGEGSINEFAFSPDGKYLATVSQDG---------F--LRIFDFDTQELLGVMK-------------------SYFGGL 335 (636)
T ss_pred eEeccccccceeEcCCCceEEEEecCc---------e--EEEeeccHHHHHHHHH-------------------hhccce
Confidence 333455788899999999999999873 2 6666766643321111 133456
Q ss_pred CCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 336 LSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 336 ~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
-.++|||||++|+. .-+++-..+|.+-
T Consensus 336 LCvcWSPDGKyIvt-GGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 336 LCVCWSPDGKYIVT-GGEDDLVTVWSFE 362 (636)
T ss_pred EEEEEcCCccEEEe-cCCcceEEEEEec
Confidence 67899999996654 4444445566553
No 363
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.54 E-value=0.0093 Score=59.36 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=67.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCc--EEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~--~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
...-++||+||..... ...-...++.....|+ +++.+-.+-.+ .-+.-.....-..+...++...+++|.+...
T Consensus 114 ~~k~vlvFvHGfNntf-~dav~R~aqI~~d~g~~~~pVvFSWPS~g---~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~ 189 (377)
T COG4782 114 SAKTVLVFVHGFNNTF-EDAVYRTAQIVHDSGNDGVPVVFSWPSRG---SLLGYNYDRESTNYSRPALERLLRYLATDKP 189 (377)
T ss_pred CCCeEEEEEcccCCch-hHHHHHHHHHHhhcCCCcceEEEEcCCCC---eeeecccchhhhhhhHHHHHHHHHHHHhCCC
Confidence 4567899999943321 2222334444444443 55556555311 1110001111222346678888888888753
Q ss_pred CCCceEEEEEeChhHHHHHHHHhh----C----CCceeEEEecCCcchh
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQ----A----PDKFVAAAARNPLCNL 597 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~----~----p~~~~~~v~~~~~~~~ 597 (715)
..+|.|++||||.++++.++.+ . +.+|+-+|+.+|-.|.
T Consensus 190 --~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 190 --VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred --CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 5789999999999999876543 1 3467888888886654
No 364
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.53 E-value=0.17 Score=50.09 Aligned_cols=68 Identities=12% Similarity=0.042 Sum_probs=38.0
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEE
Q 005093 334 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVK 405 (715)
Q Consensus 334 ~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~ 405 (715)
.+..++|+|.|++| ++..++..-++| |+++++.....+... +-...++.+....+.+..+-+++..++
T Consensus 336 wVr~~af~p~Gkyi-~ScaDDktlrvw--dl~~~~cmk~~~ah~-hfvt~lDfh~~~p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 336 WVRGVAFSPGGKYI-LSCADDKTLRVW--DLKNLQCMKTLEAHE-HFVTSLDFHKTAPYVVTGSVDQTVKVW 403 (406)
T ss_pred eeeeeEEcCCCeEE-EEEecCCcEEEE--EeccceeeeccCCCc-ceeEEEecCCCCceEEeccccceeeee
Confidence 46788899999855 555556555555 665666555444322 223344444444455555555555443
No 365
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.50 E-value=0.01 Score=66.23 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=46.1
Q ss_pred eEEEEecccccchhhhhhhhccCCCCCCceec-CCCCccccceeEcCCCCeEEE-EecCCCCCCCCccccceeEeeecCC
Q 005093 225 ALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVF-LSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-t~~~~~~~~~~~spdg~~l~~-~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
+|.++|. .+...+.+ +.....+.+|.|||||++|+| ++.+.- .+...||+.+|.+
T Consensus 330 ~L~~~D~-----------------dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~------~g~s~vYv~~L~t 386 (912)
T TIGR02171 330 NLAYIDY-----------------TKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGL------PGKSSVYVRNLNA 386 (912)
T ss_pred eEEEEec-----------------CCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCC------CCCceEEEEehhc
Confidence 7999996 66777777 777778999999999999999 655431 2456799999988
Q ss_pred CCCC
Q 005093 303 NGNF 306 (715)
Q Consensus 303 ~~~~ 306 (715)
.+..
T Consensus 387 ~~~~ 390 (912)
T TIGR02171 387 SGSG 390 (912)
T ss_pred cCCC
Confidence 6653
No 366
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=96.40 E-value=0.02 Score=59.17 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=46.7
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
.+.++.+.+..+.|||||++||.++.+ .-|.++|.+
T Consensus 285 ~w~~~~g~in~f~FS~DG~~LA~VSqD--------------------------------------------GfLRvF~fd 320 (636)
T KOG2394|consen 285 RWHIGEGSINEFAFSPDGKYLATVSQD--------------------------------------------GFLRIFDFD 320 (636)
T ss_pred eeEeccccccceeEcCCCceEEEEecC--------------------------------------------ceEEEeecc
Confidence 345566677899999999999998654 447788887
Q ss_pred CCceEeecCCCCCC--ccceEEEecCCCCCccEEEEEe
Q 005093 171 SGEVQAVKGIPKSL--SVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 171 ~g~~~~l~~~~~~~--~~~~~~~spdg~~~~~~i~~~~ 206 (715)
+.++.-+. .++ ...-+.||||||. |+.-+
T Consensus 321 t~eLlg~m---kSYFGGLLCvcWSPDGKy----IvtGG 351 (636)
T KOG2394|consen 321 TQELLGVM---KSYFGGLLCVCWSPDGKY----IVTGG 351 (636)
T ss_pred HHHHHHHH---HhhccceEEEEEcCCccE----EEecC
Confidence 77766551 111 3446799999997 77543
No 367
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=96.38 E-value=1.1 Score=51.58 Aligned_cols=88 Identities=8% Similarity=0.089 Sum_probs=51.5
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+||.+ |.+... +.+.......++|-|.|.. |+...... ..++|..+.-+ +
T Consensus 222 RkirV~drE-g~Lns~-se~~~~l~~~LsWkPsgs~----iA~iq~~~------------sd~~IvffErN-------G- 275 (1265)
T KOG1920|consen 222 RKIRVYDRE-GALNST-SEPVEGLQHSLSWKPSGSL----IAAIQCKT------------SDSDIVFFERN-------G- 275 (1265)
T ss_pred eeEEEeccc-chhhcc-cCcccccccceeecCCCCe----EeeeeecC------------CCCcEEEEecC-------C-
Confidence 678899887 655444 1233345668899999998 77665221 22356666520 0
Q ss_pred hhhccCCCCCCcee-cCCCCccccceeEcCCCCeEEEEecC
Q 005093 242 ELKESSSEDLPVVN-LTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 242 ~~~~~~~~~~~~~~-lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
...|+... .......+....|+.++.-|+.....
T Consensus 276 ------L~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~ 310 (1265)
T KOG1920|consen 276 ------LRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSN 310 (1265)
T ss_pred ------ccccccccCCcccccchheeeecCCCCceeeeecc
Confidence 02222211 11222238889999999988875543
No 368
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=96.37 E-value=0.31 Score=49.58 Aligned_cols=141 Identities=14% Similarity=0.099 Sum_probs=81.4
Q ss_pred CceEEEEEccCCceE--eec----CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccc
Q 005093 161 QPSLFVININSGEVQ--AVK----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 234 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~--~l~----~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 234 (715)
...+.+||+...... .+. -...+..+.+++|.|-.+. +.-+.. ..+.|.+.|+
T Consensus 199 d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~----lF~sv~--------------dd~~L~iwD~--- 257 (422)
T KOG0264|consen 199 DHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHED----LFGSVG--------------DDGKLMIWDT--- 257 (422)
T ss_pred CCcEEEEeccccccCCccccceEEeecCCcceehhhccccchh----hheeec--------------CCCeEEEEEc---
Confidence 477889988654321 110 0222335778899997776 433331 2246888886
Q ss_pred cchhhhhhhhccCCCCC--C-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccc
Q 005093 235 KSEASELELKESSSEDL--P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 311 (715)
Q Consensus 235 ~~~~~~~~~~~~~~~~~--~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~ 311 (715)
.++ + ........+.+...+|+|-+..|+-+...+ ..|.++|+.+-.....+..
T Consensus 258 --------------R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D----------~tV~LwDlRnL~~~lh~~e 313 (422)
T KOG0264|consen 258 --------------RSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSAD----------KTVALWDLRNLNKPLHTFE 313 (422)
T ss_pred --------------CCCCCCCcccccccCCceeEEEeCCCCCceEEeccCC----------CcEEEeechhcccCceecc
Confidence 322 1 222233355678899999877765444332 3588888765332111110
Q ss_pred eeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 312 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 312 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
. +...+..+.|+|+...++.++..+++..+|-++-
T Consensus 314 ~------------------H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 314 G------------------HEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred C------------------CCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 0 1124567789999999999888666555655443
No 369
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.37 E-value=0.0088 Score=62.41 Aligned_cols=90 Identities=21% Similarity=0.261 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCCCCCCC-ccchHHHH-HHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC--
Q 005093 480 CDPLIVVLHGGPHSVSL-SSYSKSLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG-- 555 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~-~~~~~~~~-~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~-- 555 (715)
..-+|+.+|||++.... ........ +..+.|.-|+.+||...++ .......+++.-+.-|++++.
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-----------aPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-----------APFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-----------CCCCcHHHHHHHHHHHHhcCHHH
Confidence 45578999998876532 23333333 3356799999999987543 455556899999999999862
Q ss_pred -CCCCceEEEEEeChhHHHHHHHHhh
Q 005093 556 -LANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 556 -~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
....+||+++|.|+||.+.+-.+.+
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHH
Confidence 2467999999999999987665543
No 370
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.36 E-value=0.89 Score=44.24 Aligned_cols=61 Identities=26% Similarity=0.322 Sum_probs=36.7
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 343 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 343 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
++ .+++....+. ++.+|+.+|+... ...... .......+++.+++.. . -..|+.+|+.+++
T Consensus 173 ~~-~v~~~~~~g~---~~~~d~~tg~~~w-~~~~~~-~~~~~~~~~~~l~~~~-~---~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 173 DG-RVYVSSGDGR---VVAVDLATGEKLW-SKPISG-IYSLPSVDGGTLYVTS-S---DGRLYALDLKTGK 233 (238)
T ss_dssp TT-EEEEECCTSS---EEEEETTTTEEEE-EECSS--ECECEECCCTEEEEEE-T---TTEEEEEETTTTE
T ss_pred CC-EEEEEcCCCe---EEEEECCCCCEEE-EecCCC-ccCCceeeCCEEEEEe-C---CCEEEEEECCCCC
Confidence 44 5666544332 6777999998654 222221 1122566777777666 2 3679999987764
No 371
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.30 E-value=0.68 Score=45.00 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=42.4
Q ss_pred CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCe
Q 005093 38 FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL 110 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~ 110 (715)
......+++..+|+||.+.|.-+.+ ..+++..+...|+..+...++. .++. ..+.|.-+|++
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n---~p~~iVElt~~GdlirtiPL~g-~~Dp-------E~Ieyig~n~f 142 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTN---KPAAIVELTKEGDLIRTIPLTG-FSDP-------ETIEYIGGNQF 142 (316)
T ss_pred cccccccccceeeCCCcceEEEecC---CCceEEEEecCCceEEEecccc-cCCh-------hHeEEecCCEE
Confidence 3334466899999999999876644 5568888888888877776643 2111 46677776653
No 372
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=96.28 E-value=0.19 Score=55.05 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=60.4
Q ss_pred cCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
....|.++|..|.++.+.- ......+.++.|||||+. |+..+ -++.|.++|+
T Consensus 554 ddf~I~vvD~~t~kvvR~f-~gh~nritd~~FS~DgrW----lisas---------------mD~tIr~wDl-------- 605 (910)
T KOG1539|consen 554 DDFSIRVVDVVTRKVVREF-WGHGNRITDMTFSPDGRW----LISAS---------------MDSTIRTWDL-------- 605 (910)
T ss_pred CceeEEEEEchhhhhhHHh-hccccceeeeEeCCCCcE----EEEee---------------cCCcEEEEec--------
Confidence 3478999999877654431 223346889999999999 88776 3346888997
Q ss_pred hhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 240 ELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 240 ~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
.++...--..-+..+.+.+|||+|++||-+...
T Consensus 606 ---------pt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 606 ---------PTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred ---------cCcceeeeEecCCcceeeEECCCCCEEEEEEec
Confidence 555544333334567889999999999977655
No 373
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.25 E-value=0.16 Score=55.64 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=24.8
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
..+.+|++...++..- .+-...++.+.|+|||+.
T Consensus 432 ~KvRiWsI~d~~Vv~W--~Dl~~lITAvcy~PdGk~ 465 (712)
T KOG0283|consen 432 GKVRLWSISDKKVVDW--NDLRDLITAVCYSPDGKG 465 (712)
T ss_pred cceEEeecCcCeeEee--hhhhhhheeEEeccCCce
Confidence 5577888866666554 344456889999999997
No 374
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.20 E-value=0.26 Score=47.92 Aligned_cols=56 Identities=20% Similarity=0.335 Sum_probs=35.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDET 109 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~ 109 (715)
..++..+|.||.++|+.+.+ +...++.+...|+..+...+.. . + -+.++.+.-+|+
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d---~~~~i~els~~G~vlr~i~l~g-~-~------D~EgI~y~g~~~ 77 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQD---EPGEIYELSLDGKVLRRIPLDG-F-G------DYEGITYLGNGR 77 (248)
T ss_dssp S-EEEEEEETTTTEEEEEET---TTTEEEEEETT--EEEEEE-SS---S------SEEEEEE-STTE
T ss_pred CCccccEEcCCCCeEEEEEC---CCCEEEEEcCCCCEEEEEeCCC-C-C------CceeEEEECCCE
Confidence 45899999999999987766 3457888886677666665532 1 1 126788877664
No 375
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.15 E-value=0.011 Score=48.90 Aligned_cols=59 Identities=15% Similarity=0.186 Sum_probs=47.5
Q ss_pred CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 648 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 648 ~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..|+|++.++.|+..|.+.++.+.++|.. .+++..++.||+... ....-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYA-GGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceec-CCChHHHHHHHHHHH
Confidence 48999999999999999999999888854 689999999998764 222345666777775
No 376
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=96.14 E-value=0.57 Score=46.99 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=52.7
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccc
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSA 263 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~ 263 (715)
.+.-+.|.|--.. +++++. .++.|...++ .+|+. ..|. ++..+
T Consensus 133 rVg~V~wHPtA~N----VLlsag--------------~Dn~v~iWnv-----------------~tgeali~l~-hpd~i 176 (472)
T KOG0303|consen 133 RVGLVQWHPTAPN----VLLSAG--------------SDNTVSIWNV-----------------GTGEALITLD-HPDMV 176 (472)
T ss_pred eEEEEeecccchh----hHhhcc--------------CCceEEEEec-----------------cCCceeeecC-CCCeE
Confidence 4667899998887 877762 2236777776 55553 3444 67779
Q ss_pred cceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 264 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 264 ~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
.+..|+-||..|+-++.+. .|.++|..+++.
T Consensus 177 ~S~sfn~dGs~l~TtckDK-----------kvRv~dpr~~~~ 207 (472)
T KOG0303|consen 177 YSMSFNRDGSLLCTTCKDK-----------KVRVIDPRRGTV 207 (472)
T ss_pred EEEEeccCCceeeeecccc-----------eeEEEcCCCCcE
Confidence 9999999999998776653 478888766543
No 377
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.12 E-value=0.022 Score=55.40 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=64.8
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCCCCCc
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLANPS 560 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~d~~ 560 (715)
|.++++|++.+. ...|..+...|... ..|+..+.+|.+.. ......++++.+. ++.+.+.. ...
T Consensus 1 ~pLF~fhp~~G~--~~~~~~L~~~l~~~-~~v~~l~a~g~~~~----------~~~~~~l~~~a~~yv~~Ir~~Q--P~G 65 (257)
T COG3319 1 PPLFCFHPAGGS--VLAYAPLAAALGPL-LPVYGLQAPGYGAG----------EQPFASLDDMAAAYVAAIRRVQ--PEG 65 (257)
T ss_pred CCEEEEcCCCCc--HHHHHHHHHHhccC-ceeeccccCccccc----------ccccCCHHHHHHHHHHHHHHhC--CCC
Confidence 568899996544 34566677777666 88999999984321 1112235555544 33444321 246
Q ss_pred eEEEEEeChhHHHHHHHHhhC---CCceeEEEecCCcch
Q 005093 561 KVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCN 596 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~~ 596 (715)
++.|.|+|+||.+|.-+|.+. ...++.++++.++..
T Consensus 66 Py~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 899999999999999888653 345666676666554
No 378
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.10 E-value=0.074 Score=60.19 Aligned_cols=183 Identities=16% Similarity=0.144 Sum_probs=98.0
Q ss_pred CceEEEEEccCCceEeec-C-CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 161 QPSLFVININSGEVQAVK-G-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~-~-~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
...|++||++.-+ +..+ + ......+..++|.-.-.. |+-++... +...++|+
T Consensus 138 ~geI~iWDlnn~~-tP~~~~~~~~~~eI~~lsWNrkvqh----ILAS~s~s--------------g~~~iWDl------- 191 (1049)
T KOG0307|consen 138 DGEILIWDLNKPE-TPFTPGSQAPPSEIKCLSWNRKVSH----ILASGSPS--------------GRAVIWDL------- 191 (1049)
T ss_pred CCcEEEeccCCcC-CCCCCCCCCCcccceEeccchhhhH----HhhccCCC--------------CCceeccc-------
Confidence 3679999997632 2331 0 111224556677766665 55444211 13445555
Q ss_pred hhhhhhccCCCCCCceecCCCCc--cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC--CCCCcccceee
Q 005093 239 SELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN--GNFSSLEKIVD 314 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~--~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~--~~~~lt~~~~~ 314 (715)
+....+..++...+ ....+.|.||+-.-+.+...++ ....|-++|+... -.+.++
T Consensus 192 ---------r~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd-------~~PviqlWDlR~assP~k~~~----- 250 (1049)
T KOG0307|consen 192 ---------RKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDD-------SAPVIQLWDLRFASSPLKILE----- 250 (1049)
T ss_pred ---------cCCCcccccccCCCccceeeeeeCCCCceeeeeecCCC-------CCceeEeecccccCCchhhhc-----
Confidence 13344555554433 4788999999866555544432 1223555564332 122222
Q ss_pred eeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCC-ceeEEEeecCCEEEE
Q 005093 315 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESN-FSWSLLTLDGDNIIA 393 (715)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~-~~~~~~s~~~~~l~~ 393 (715)
.|..++-.+.|.+.+..+++++..+ .+++.+|..||++.-=.+..++ +....|++..-.+ +
T Consensus 251 ---------------~H~~GilslsWc~~D~~lllSsgkD--~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~-~ 312 (1049)
T KOG0307|consen 251 ---------------GHQRGILSLSWCPQDPRLLLSSGKD--NRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSV-M 312 (1049)
T ss_pred ---------------ccccceeeeccCCCCchhhhcccCC--CCeeEecCCCceEeeecCCCCcceeeeeecCCCcch-h
Confidence 1334667788988876677766543 5788899999887654443331 2223555543322 2
Q ss_pred EEeCCCCCCeEEEEe
Q 005093 394 VSSSPVDVPQVKYGY 408 (715)
Q Consensus 394 ~~~~~~~p~~l~~~~ 408 (715)
..++....-+||-+.
T Consensus 313 A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 313 AAASFDGKISIYSLQ 327 (1049)
T ss_pred hhheeccceeeeeee
Confidence 334445555555433
No 379
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=96.06 E-value=0.54 Score=48.67 Aligned_cols=108 Identities=8% Similarity=-0.010 Sum_probs=64.6
Q ss_pred eeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 294 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 294 ~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
+||-+-+...+.+.+|.+.+..+.+|...+- .+.-..........|.|.| .+.+-+. . .+.+.+|..+.....+-
T Consensus 370 elwgla~hps~~q~~T~gqdk~v~lW~~~k~-~wt~~~~d~~~~~~fhpsg-~va~Gt~-~--G~w~V~d~e~~~lv~~~ 444 (626)
T KOG2106|consen 370 ELWGLATHPSKNQLLTCGQDKHVRLWNDHKL-EWTKIIEDPAECADFHPSG-VVAVGTA-T--GRWFVLDTETQDLVTIH 444 (626)
T ss_pred ceeeEEcCCChhheeeccCcceEEEccCCce-eEEEEecCceeEeeccCcc-eEEEeec-c--ceEEEEecccceeEEEE
Confidence 5666666556666777777777777762221 1111111233455688888 4444332 2 37788899887777776
Q ss_pred CCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEe
Q 005093 374 PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 408 (715)
Q Consensus 374 ~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~ 408 (715)
......+...++++|..++.-+ .+.--.||+++
T Consensus 445 ~d~~~ls~v~ysp~G~~lAvgs--~d~~iyiy~Vs 477 (626)
T KOG2106|consen 445 TDNEQLSVVRYSPDGAFLAVGS--HDNHIYIYRVS 477 (626)
T ss_pred ecCCceEEEEEcCCCCEEEEec--CCCeEEEEEEC
Confidence 6666678889999998776543 22333344444
No 380
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.98 E-value=0.023 Score=58.47 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=67.0
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHhCCcE---EEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYS---LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~la~~G~~---vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
.++++||.... ...+..+...++..|+. +..+++.+.... .......+.+.+-|+.+.... ..
T Consensus 61 pivlVhG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----------~~~~~~~~ql~~~V~~~l~~~--ga 126 (336)
T COG1075 61 PIVLVHGLGGG--YGNFLPLDYRLAILGWLTNGVYAFELSGGDGT----------YSLAVRGEQLFAYVDEVLAKT--GA 126 (336)
T ss_pred eEEEEccCcCC--cchhhhhhhhhcchHHHhcccccccccccCCC----------ccccccHHHHHHHHHHHHhhc--CC
Confidence 58899996332 34555555567777777 777777753111 111122455555566555553 34
Q ss_pred ceEEEEEeChhHHHHHHHHhhCC--CceeEEEecCCcch
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAP--DKFVAAAARNPLCN 596 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p--~~~~~~v~~~~~~~ 596 (715)
.++.++||||||..+.+++...+ .+++.++.+++.-.
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 88999999999999999988887 78888888776543
No 381
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.98 E-value=1 Score=43.41 Aligned_cols=204 Identities=14% Similarity=0.079 Sum_probs=108.1
Q ss_pred EEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCccc
Q 005093 70 QFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 149 (715)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (715)
+..+...|+....+.++..- .++.++|--.+-.+.+.++
T Consensus 51 ~a~~~eaGk~v~~~~lpaR~----------Hgi~~~p~~~ravafARrP------------------------------- 89 (366)
T COG3490 51 AATLSEAGKIVFATALPARG----------HGIAFHPALPRAVAFARRP------------------------------- 89 (366)
T ss_pred EEEEccCCceeeeeeccccc----------CCeecCCCCcceEEEEecC-------------------------------
Confidence 33444667777777777666 4888999876666655543
Q ss_pred CCcCcccCCccCceEEEEEccCCceEee-cCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEE
Q 005093 150 EDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 228 (715)
Q Consensus 150 ~~~g~~~~~~~~~~l~~~~~~~g~~~~l-~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~ 228 (715)
| .--+++|+++....++ .......-...-+|||||+ ++|.+..+-+ +...-|-+
T Consensus 90 ---G--------tf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~-----~LYATEndfd---------~~rGViGv 144 (366)
T COG3490 90 ---G--------TFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGR-----LLYATENDFD---------PNRGVIGV 144 (366)
T ss_pred ---C--------ceEEEECCCCCcCcEEEecccCceeecccccCCCCc-----EEEeecCCCC---------CCCceEEE
Confidence 1 3357788877654333 2122222355678999999 5665532221 12234556
Q ss_pred EecccccchhhhhhhhccCCCCCCcee---cCCCCccccceeEcCCCCeEEEEecCCCC-------CCCCccccceeEee
Q 005093 229 VRVSLYKSEASELELKESSSEDLPVVN---LTESISSAFFPRFSPDGKFLVFLSAKSSV-------DSGAHSATDSLHRI 298 (715)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---lt~~~~~~~~~~~spdg~~l~~~~~~~~~-------~~g~~~~~~~l~~~ 298 (715)
+|. . ....+ ............|++||+.|+.....-.. .........+|-++
T Consensus 145 Yd~-----------------r-~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvll 206 (366)
T COG3490 145 YDA-----------------R-EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLL 206 (366)
T ss_pred Eec-----------------c-cccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEE
Confidence 664 1 22222 22233346779999999999876541000 00111223456677
Q ss_pred ecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCC----eeEEEEEECCCCcEEEec
Q 005093 299 DWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS----SQVIISVNVSSGELLRIT 373 (715)
Q Consensus 299 ~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~----~~~l~~~d~~tg~~~~l~ 373 (715)
|..+++... .+... .+...++..+...+||+ ++|...-.+ ..-|.-.-..++..+.+.
T Consensus 207 d~atG~liekh~Lp~----------------~l~~lSiRHld~g~dgt-vwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~ 269 (366)
T COG3490 207 DAATGNLIEKHTLPA----------------SLRQLSIRHLDIGRDGT-VWFGCQYRGPRNDLPPLVGHFRKGEPLEFLD 269 (366)
T ss_pred eccccchhhhccCch----------------hhhhcceeeeeeCCCCc-EEEEEEeeCCCccCCcceeeccCCCcCcccC
Confidence 755554321 11100 01223556666777886 666554332 223666665555555554
Q ss_pred C
Q 005093 374 P 374 (715)
Q Consensus 374 ~ 374 (715)
.
T Consensus 270 ~ 270 (366)
T COG3490 270 L 270 (366)
T ss_pred C
Confidence 3
No 382
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.96 E-value=0.014 Score=55.87 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCC----CceeEEEecCC
Q 005093 545 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP----DKFVAAAARNP 593 (715)
Q Consensus 545 ~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p----~~~~~~v~~~~ 593 (715)
..|++++.+...-.+.+|.+.|||.||.+|.++++..+ +++..+....+
T Consensus 69 ~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 44555554431112346999999999999999988743 46777765554
No 383
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=95.93 E-value=0.21 Score=50.08 Aligned_cols=63 Identities=13% Similarity=0.095 Sum_probs=45.7
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCcccc
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAF 264 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~ 264 (715)
.+.+.+|+||+.. +++.+ ..+.++.+|+ ..+.....+..+.....
T Consensus 125 diydL~Ws~d~~~----l~s~s---------------~dns~~l~Dv----------------~~G~l~~~~~dh~~yvq 169 (434)
T KOG1009|consen 125 DIYDLAWSPDSNF----LVSGS---------------VDNSVRLWDV----------------HAGQLLAILDDHEHYVQ 169 (434)
T ss_pred chhhhhccCCCce----eeeee---------------ccceEEEEEe----------------ccceeEeeccccccccc
Confidence 4668899999998 88776 2235777776 13444455666677788
Q ss_pred ceeEcCCCCeEEEEecCC
Q 005093 265 FPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~ 282 (715)
..+|.|-+++++-.+..+
T Consensus 170 gvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 170 GVAWDPLNQYVASKSSDR 187 (434)
T ss_pred eeecchhhhhhhhhccCc
Confidence 999999999988776654
No 384
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=95.93 E-value=0.77 Score=47.43 Aligned_cols=136 Identities=13% Similarity=0.130 Sum_probs=83.8
Q ss_pred ceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|.+..++++... .++ .+.+..+..+.|||..+. ++-++..+ +.+.++|+
T Consensus 143 Gdiiih~~~t~~~tt~f~-~~sgqsvRll~ys~skr~----lL~~asd~--------------G~VtlwDv--------- 194 (673)
T KOG4378|consen 143 GDIIIHGTKTKQKTTTFT-IDSGQSVRLLRYSPSKRF----LLSIASDK--------------GAVTLWDV--------- 194 (673)
T ss_pred CcEEEEecccCcccccee-cCCCCeEEEeecccccce----eeEeeccC--------------CeEEEEec---------
Confidence 56777887776533 232 333445667899999998 77766322 25667775
Q ss_pred hhhhccCCCCCC--ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-CCcccceeeeee
Q 005093 241 LELKESSSEDLP--VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVDVIP 317 (715)
Q Consensus 241 ~~~~~~~~~~~~--~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~~lt~~~~~~~~ 317 (715)
++.. ......+......+.|||-...|+ ++-.- ...|+++|...... .+|+
T Consensus 195 --------~g~sp~~~~~~~HsAP~~gicfspsne~l~-vsVG~---------Dkki~~yD~~s~~s~~~l~-------- 248 (673)
T KOG4378|consen 195 --------QGMSPIFHASEAHSAPCRGICFSPSNEALL-VSVGY---------DKKINIYDIRSQASTDRLT-------- 248 (673)
T ss_pred --------cCCCcccchhhhccCCcCcceecCCccceE-EEecc---------cceEEEeecccccccceee--------
Confidence 3333 233444556788999999887664 43221 24699999765332 2222
Q ss_pred ceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCC
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSG 367 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg 367 (715)
|......++|+++|.+|..... +.+|+.+|+...
T Consensus 249 -------------y~~Plstvaf~~~G~~L~aG~s---~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 249 -------------YSHPLSTVAFSECGTYLCAGNS---KGELIAYDMRST 282 (673)
T ss_pred -------------ecCCcceeeecCCceEEEeecC---CceEEEEecccC
Confidence 2334567889999975544332 348999998643
No 385
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.91 E-value=0.014 Score=56.12 Aligned_cols=22 Identities=27% Similarity=0.554 Sum_probs=18.4
Q ss_pred CceEEEEEeChhHHHHHHHHhh
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
..+|.++|||+||.++-.++..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccceEEEecccHHHHHHHHHH
Confidence 3689999999999999877653
No 386
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.87 E-value=2.1 Score=46.65 Aligned_cols=66 Identities=11% Similarity=-0.005 Sum_probs=40.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCe--EEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPI--QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
-.....+.|||++.|||..+.- +..+ +...+ .+|+... +.-.+. ..++.|.+|++.++|...+..
T Consensus 129 ~~Lg~~~~s~D~~~la~s~D~~-G~e~y~lr~kdL~tg~~~~--d~i~~~---------~~~~~Wa~d~~~lfYt~~d~~ 196 (682)
T COG1770 129 FSLGAASISPDHNLLAYSVDVL-GDEQYTLRFKDLATGEELP--DEITNT---------SGSFAWAADGKTLFYTRLDEN 196 (682)
T ss_pred eeeeeeeeCCCCceEEEEEecc-cccEEEEEEEecccccccc--hhhccc---------ccceEEecCCCeEEEEEEcCC
Confidence 3466788999999999987764 2222 22222 3332211 111111 158999999999999886654
Q ss_pred C
Q 005093 120 P 120 (715)
Q Consensus 120 ~ 120 (715)
.
T Consensus 197 ~ 197 (682)
T COG1770 197 H 197 (682)
T ss_pred C
Confidence 3
No 387
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=95.83 E-value=1.6 Score=40.78 Aligned_cols=101 Identities=21% Similarity=0.200 Sum_probs=59.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+.+.++.-||++.+-. ++.....+| ..|...+.... .+. .+-...-|-|..+++-.
T Consensus 18 gaV~avryN~dGnY~ltc-----GsdrtvrLWNp~rg~liktYsg-hG~--------EVlD~~~s~Dnskf~s~------ 77 (307)
T KOG0316|consen 18 GAVRAVRYNVDGNYCLTC-----GSDRTVRLWNPLRGALIKTYSG-HGH--------EVLDAALSSDNSKFASC------ 77 (307)
T ss_pred cceEEEEEccCCCEEEEc-----CCCceEEeecccccceeeeecC-CCc--------eeeeccccccccccccC------
Confidence 678999999999987644 344567778 34444333221 111 11355566666665542
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
| +...+++||++||++.+-- -.....+..++|..+..
T Consensus 78 --------------------------------G------gDk~v~vwDV~TGkv~Rr~-rgH~aqVNtV~fNeesS---- 114 (307)
T KOG0316|consen 78 --------------------------------G------GDKAVQVWDVNTGKVDRRF-RGHLAQVNTVRFNEESS---- 114 (307)
T ss_pred --------------------------------C------CCceEEEEEcccCeeeeec-ccccceeeEEEecCcce----
Confidence 1 2377999999999865431 12223456677776554
Q ss_pred EEEEEee
Q 005093 201 YLVFVGW 207 (715)
Q Consensus 201 ~i~~~~~ 207 (715)
+++++.
T Consensus 115 -Vv~Sgs 120 (307)
T KOG0316|consen 115 -VVASGS 120 (307)
T ss_pred -EEEecc
Confidence 666543
No 388
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.82 E-value=1.7 Score=40.93 Aligned_cols=60 Identities=8% Similarity=0.059 Sum_probs=35.1
Q ss_pred CCCCccccCC---CEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCCC-CceeEEEeecCCEEEEE
Q 005093 335 ILSNPWLSDG---CTMLLSSIWGSSQVIISVNVSSGELLR-ITPAES-NFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 335 ~~~~~~~~dg---~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~-~~~~~~~s~~~~~l~~~ 394 (715)
++.++|.|.- +.-+.+.+.+++.-||..+.+.+..+. +..... .....++|..|+.|...
T Consensus 210 VRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs 274 (299)
T KOG1332|consen 210 VRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVS 274 (299)
T ss_pred hhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEe
Confidence 4567787743 344555667777889988855444332 222222 23446788888766543
No 389
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=95.81 E-value=0.47 Score=51.04 Aligned_cols=117 Identities=21% Similarity=0.272 Sum_probs=69.7
Q ss_pred ccCCC-cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 93 VYADG-WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 93 ~~~~~-~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
+|+-+ .+..+..||+|+.||-....... ....|++|+..+
T Consensus 521 LYGHGyEv~~l~~s~~gnliASaCKS~~~---------------------------------------ehAvI~lw~t~~ 561 (764)
T KOG1063|consen 521 LYGHGYEVYALAISPTGNLIASACKSSLK---------------------------------------EHAVIRLWNTAN 561 (764)
T ss_pred hccCceeEEEEEecCCCCEEeehhhhCCc---------------------------------------cceEEEEEeccc
Confidence 34444 45578899999988776543211 236689998765
Q ss_pred Cc-eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 172 GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 172 g~-~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
=. .+.| ...++.+..++|||||+. |+-.+. + |...||..-= ++...
T Consensus 562 W~~~~~L--~~HsLTVT~l~FSpdg~~----LLsvsR-D------------Rt~sl~~~~~--------------~~~~e 608 (764)
T KOG1063|consen 562 WLQVQEL--EGHSLTVTRLAFSPDGRY----LLSVSR-D------------RTVSLYEVQE--------------DIKDE 608 (764)
T ss_pred hhhhhee--cccceEEEEEEECCCCcE----EEEeec-C------------ceEEeeeeec--------------ccchh
Confidence 43 3345 456678899999999998 877652 1 2123443320 00011
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
-....+..+..-+.+-.|+||+++++-.|.+
T Consensus 609 ~~fa~~k~HtRIIWdcsW~pde~~FaTaSRD 639 (764)
T KOG1063|consen 609 FRFACLKAHTRIIWDCSWSPDEKYFATASRD 639 (764)
T ss_pred hhhccccccceEEEEcccCcccceeEEecCC
Confidence 1112233344457888999999996655544
No 390
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=95.78 E-value=0.36 Score=51.38 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=22.2
Q ss_pred eEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 225 ALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
.|..+|. +++. .+++.-. .+..+.||+||+.+++++..
T Consensus 127 ~i~~yDw-----------------~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~ 165 (443)
T PF04053_consen 127 FICFYDW-----------------ETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD 165 (443)
T ss_dssp EEEEE-T-----------------TT--EEEEESS---E-EEEEE-TTSSEEEEE-S-
T ss_pred CEEEEEh-----------------hHcceeeEEecC--CCcEEEEECCCCEEEEEeCC
Confidence 4889997 5444 3444322 26789999999999999755
No 391
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.75 E-value=0.031 Score=58.90 Aligned_cols=83 Identities=16% Similarity=0.230 Sum_probs=56.1
Q ss_pred cchHHHHHHHhCCcEE----E-E-EcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhH
Q 005093 498 SYSKSLAFLSSVGYSL----L-I-VNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGG 571 (715)
Q Consensus 498 ~~~~~~~~la~~G~~v----i-~-~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG 571 (715)
.|..+++.|++.||.. + + .|.|-+.. ....-...+...|+.+.+.. ..+|.|+||||||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~------------~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGg 130 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA------------ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGG 130 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh------------hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCc
Confidence 6788899999988752 2 2 56665322 00111445556666655542 6899999999999
Q ss_pred HHHHHHHhhCCC------ceeEEEecCCcc
Q 005093 572 FLTTHLIGQAPD------KFVAAAARNPLC 595 (715)
Q Consensus 572 ~~a~~~a~~~p~------~~~~~v~~~~~~ 595 (715)
.++..++...+. .+++.|.+++..
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 999998877643 478888877654
No 392
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.74 E-value=0.027 Score=61.36 Aligned_cols=49 Identities=20% Similarity=0.303 Sum_probs=33.9
Q ss_pred cchhhHHHHHHHHHHcC----CCC---CceEEEEEeChhHHHHHHHHhhCCCceeEE
Q 005093 539 QDVNDVLTAIDHVIDMG----LAN---PSKVTVVGGSHGGFLTTHLIGQAPDKFVAA 588 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~----~~d---~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 588 (715)
...+-+.+||+++.+.. .-+ +..|+|+||||||.+|..++. +|...++.
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~s 209 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGS 209 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccch
Confidence 34666778888877642 122 667999999999999876665 46544443
No 393
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.73 E-value=0.47 Score=49.55 Aligned_cols=123 Identities=20% Similarity=0.239 Sum_probs=75.1
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcE-EEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS-LLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~-vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+.++- +++-| +.-+.|+.|++-|.-. ...|.. .-.+...|.- .+.-|.|-- |..|. .+.
T Consensus 273 ~~reEi~-yYFnP----GD~KPPL~VYFSGyR~---aEGFEg-y~MMk~Lg~PfLL~~DpRle---GGaFY------lGs 334 (511)
T TIGR03712 273 SKRQEFI-YYFNP----GDFKPPLNVYFSGYRP---AEGFEG-YFMMKRLGAPFLLIGDPRLE---GGAFY------LGS 334 (511)
T ss_pred CCCCeeE-EecCC----cCCCCCeEEeeccCcc---cCcchh-HHHHHhcCCCeEEeeccccc---cceee------eCc
Confidence 3444553 34556 3457799999998322 222322 1223455654 445678863 33331 222
Q ss_pred cch-hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc
Q 005093 539 QDV-NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG 602 (715)
Q Consensus 539 ~~~-~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~ 602 (715)
... +.+.+.|....+.-..+.+.+.|.|.|||.+-|+.+++... -.|+|+.-|.+++-.+..
T Consensus 335 ~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NLGtiA~ 397 (511)
T TIGR03712 335 DEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNLGTIAS 397 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccchhhhhc
Confidence 222 24455555444444578899999999999999999988643 468888889988766544
No 394
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=95.72 E-value=0.051 Score=67.79 Aligned_cols=100 Identities=12% Similarity=0.118 Sum_probs=65.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.++++||.+.. ...|..+...| ..++.|+.++.+|. +.. ......++++.+.+...+... ....
T Consensus 1068 ~~~l~~lh~~~g~--~~~~~~l~~~l-~~~~~v~~~~~~g~---~~~-------~~~~~~l~~la~~~~~~i~~~-~~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIYGIQSPRP---DGP-------MQTATSLDEVCEAHLATLLEQ-QPHG 1133 (1296)
T ss_pred CCCeEEecCCCCc--hHHHHHHHHhc-CCCCcEEEEECCCC---CCC-------CCCCCCHHHHHHHHHHHHHhh-CCCC
Confidence 3668999996654 34666777766 45699999999983 221 011123555554433333321 1235
Q ss_pred eEEEEEeChhHHHHHHHHhh---CCCceeEEEecCCc
Q 005093 561 KVTVVGGSHGGFLTTHLIGQ---APDKFVAAAARNPL 594 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~---~p~~~~~~v~~~~~ 594 (715)
++.++|||+||.++..+|.+ .++++..++++.+.
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 79999999999999999875 46778888777653
No 395
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.71 E-value=0.3 Score=48.98 Aligned_cols=158 Identities=10% Similarity=0.069 Sum_probs=85.2
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccc-cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEE---ecCc-c
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMT-GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEF---HVPQ-T 88 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~ 88 (715)
.+..+..+.++..+.+..+ ....|..+.. -...++++.++.+++|++-.+ .++.+.-+|...+.. .+-. .
T Consensus 155 ~DGsl~~v~Ld~~Gk~~~~-~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G----~v~~~dlsg~~~~~~~~~~~~t~~ 229 (342)
T PF06433_consen 155 GDGSLLTVTLDADGKEAQK-STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEG----NVYSADLSGDSAKFGKPWSLLTDA 229 (342)
T ss_dssp TTSCEEEEEETSTSSEEEE-EEEESSTTTS-B-S--EEETTTTEEEEEBTTS----EEEEEEETTSSEEEEEEEESS-HH
T ss_pred cCCceEEEEECCCCCEeEe-eccccCCCCcccccccceECCCCeEEEEecCC----EEEEEeccCCcccccCcccccCcc
Confidence 4456677778777654422 2223333222 134677788888999988776 688877333332222 1111 0
Q ss_pred c--cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEE
Q 005093 89 V--HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 166 (715)
Q Consensus 89 ~--~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 166 (715)
. .+| -. +...-+++++...+|+.+...... .-.......||+
T Consensus 230 e~~~~W-rP-GG~Q~~A~~~~~~rlyvLMh~g~~----------------------------------gsHKdpgteVWv 273 (342)
T PF06433_consen 230 EKADGW-RP-GGWQLIAYHAASGRLYVLMHQGGE----------------------------------GSHKDPGTEVWV 273 (342)
T ss_dssp HHHTTE-EE--SSS-EEEETTTTEEEEEEEE--T----------------------------------T-TTS-EEEEEE
T ss_pred ccccCc-CC-cceeeeeeccccCeEEEEecCCCC----------------------------------CCccCCceEEEE
Confidence 0 011 00 111467777777777776543211 000012378999
Q ss_pred EEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 167 ININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 167 ~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
+|+++++...- .+-...+.++..|.|.+= ++|.... ....|+++|.
T Consensus 274 ~D~~t~krv~R--i~l~~~~~Si~Vsqd~~P----~L~~~~~-------------~~~~l~v~D~ 319 (342)
T PF06433_consen 274 YDLKTHKRVAR--IPLEHPIDSIAVSQDDKP----LLYALSA-------------GDGTLDVYDA 319 (342)
T ss_dssp EETTTTEEEEE--EEEEEEESEEEEESSSS-----EEEEEET-------------TTTEEEEEET
T ss_pred EECCCCeEEEE--EeCCCccceEEEccCCCc----EEEEEcC-------------CCCeEEEEeC
Confidence 99999986543 232334557788998888 8887532 2347999997
No 396
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=95.70 E-value=0.46 Score=47.30 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=79.6
Q ss_pred ceEEEEEccCCceEeec--CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 162 PSLFVININSGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~--~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
..|++|...+|....-. -+....++.+++|||.-+. +++++..++ .|-+.|.
T Consensus 234 ~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~----vfaScS~Dg--------------sIrIWDi-------- 287 (440)
T KOG0302|consen 234 KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDG----VFASCSCDG--------------SIRIWDI-------- 287 (440)
T ss_pred cceEeeeeccCceeecCccccccccchhhhccCCccCc----eEEeeecCc--------------eEEEEEe--------
Confidence 66888888877543211 0223457889999999998 777764333 3444443
Q ss_pred hhhhhccCCCCC---CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeee
Q 005093 240 ELELKESSSEDL---PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDV 315 (715)
Q Consensus 240 ~~~~~~~~~~~~---~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~ 315 (715)
..+ ...........+.-++|+-+-..||+...+ | .|.++||..-+.. .+.
T Consensus 288 ---------Rs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~Dd-----G------t~~iwDLR~~~~~~pVA------ 341 (440)
T KOG0302|consen 288 ---------RSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDD-----G------TLSIWDLRQFKSGQPVA------ 341 (440)
T ss_pred ---------cCCCccceeEeeccCCceeeEEccCCcceeeecCCC-----c------eEEEEEhhhccCCCcce------
Confidence 222 222222334456778998877755544333 1 3666676553321 110
Q ss_pred eeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 316 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
.|. .+...+..+.|+|....++..+..+....||-+.+
T Consensus 342 ----------~fk-~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 342 ----------TFK-YHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred ----------eEE-eccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 111 13345678889998887877776665556665443
No 397
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.57 E-value=0.063 Score=50.68 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=54.4
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhh-----hcCC-----CCCCccchhhHHHHH
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL-----QSLP-----GKVGSQDVNDVLTAI 548 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~-----~~~~-----~~~~~~~~~d~~~~i 548 (715)
+..|+.|.+-|-+....... ..+...+..+|++.+.+.-+- ||+.-. ..+. -..|...++++...+
T Consensus 111 K~~~KOG~~a~tgdh~y~rr-~~L~~p~~k~~i~tmvle~pf---Ygqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf 186 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRR-LVLSKPINKREIATMVLEKPF---YGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLF 186 (371)
T ss_pred CcCCeeEEEeecCCceeEee-eeecCchhhhcchheeeeccc---ccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhc
Confidence 45577777776332222222 123445678888888887554 444210 0000 001111223333333
Q ss_pred HHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeE
Q 005093 549 DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVA 587 (715)
Q Consensus 549 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 587 (715)
.|-.+. .-.+.+|+|-||||.+|..+...++..++-
T Consensus 187 ~Ws~~~---g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~ 222 (371)
T KOG1551|consen 187 TWSSAD---GLGNLNLVGRSMGGDIANQVGSLHQKPVAT 222 (371)
T ss_pred cccccc---CcccceeeeeecccHHHHhhcccCCCCccc
Confidence 332122 246899999999999999998877654443
No 398
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=95.51 E-value=0.15 Score=55.80 Aligned_cols=90 Identities=20% Similarity=0.193 Sum_probs=58.2
Q ss_pred ceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 224 CALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 224 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
..|.++|. .+... +.+......+.+..|||||++|+-++.+. .|.++|+.+
T Consensus 556 f~I~vvD~-----------------~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~-----------tIr~wDlpt 607 (910)
T KOG1539|consen 556 FSIRVVDV-----------------VTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS-----------TIRTWDLPT 607 (910)
T ss_pred eeEEEEEc-----------------hhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC-----------cEEEEeccC
Confidence 36888886 44444 34445666789999999999999888874 389999998
Q ss_pred CCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 303 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 303 ~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
+.-.-. +.. +....++.++|+|++|..+.. +...||.+-
T Consensus 608 ~~lID~----------~~v----------d~~~~sls~SPngD~LAT~Hv--d~~gIylWs 646 (910)
T KOG1539|consen 608 GTLIDG----------LLV----------DSPCTSLSFSPNGDFLATVHV--DQNGIYLWS 646 (910)
T ss_pred cceeee----------Eec----------CCcceeeEECCCCCEEEEEEe--cCceEEEEE
Confidence 664210 000 001246779999995544333 334566553
No 399
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=95.41 E-value=0.95 Score=42.25 Aligned_cols=162 Identities=16% Similarity=0.081 Sum_probs=91.6
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+|++-.|....-. ......+.+++-+-|+.+ ++-.+ .+-.++++|+
T Consensus 39 rtvrLWNp~rg~liktY-sghG~EVlD~~~s~Dnsk----f~s~G---------------gDk~v~vwDV---------- 88 (307)
T KOG0316|consen 39 RTVRLWNPLRGALIKTY-SGHGHEVLDAALSSDNSK----FASCG---------------GDKAVQVWDV---------- 88 (307)
T ss_pred ceEEeecccccceeeee-cCCCceeeeccccccccc----cccCC---------------CCceEEEEEc----------
Confidence 56888888777654431 222335667778888888 66544 2236788886
Q ss_pred hhhccCCCCC-CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC--CCc-ccceee---
Q 005093 242 ELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN--FSS-LEKIVD--- 314 (715)
Q Consensus 242 ~~~~~~~~~~-~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~--~~l-t~~~~~--- 314 (715)
++| ..+++-.+.+.+..+.|..+..-++-.+.+. .+..+|..+... .++ ....+.
T Consensus 89 -------~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~-----------s~r~wDCRS~s~ePiQildea~D~V~S 150 (307)
T KOG0316|consen 89 -------NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDS-----------SVRLWDCRSRSFEPIQILDEAKDGVSS 150 (307)
T ss_pred -------ccCeeeeecccccceeeEEEecCcceEEEeccccc-----------eeEEEEcccCCCCccchhhhhcCceeE
Confidence 554 5567777777888899988877555444432 244455443322 221 111111
Q ss_pred ---------------eeeceecCCCCCcccccc-CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC
Q 005093 315 ---------------VIPVVQCAEGDCFPGLYS-SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA 375 (715)
Q Consensus 315 ---------------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~ 375 (715)
.+...+..+...+. .|. ..+..+.+++||+-.+..+.+ ..|-.+|-.||+....-.+
T Consensus 151 i~v~~heIvaGS~DGtvRtydiR~G~l~s-Dy~g~pit~vs~s~d~nc~La~~l~---stlrLlDk~tGklL~sYkG 223 (307)
T KOG0316|consen 151 IDVAEHEIVAGSVDGTVRTYDIRKGTLSS-DYFGHPITSVSFSKDGNCSLASSLD---STLRLLDKETGKLLKSYKG 223 (307)
T ss_pred EEecccEEEeeccCCcEEEEEeecceeeh-hhcCCcceeEEecCCCCEEEEeecc---ceeeecccchhHHHHHhcc
Confidence 11111111110000 121 245678899999977666553 3677789889987655443
No 400
>KOG4328 consensus WD40 protein [Function unknown]
Probab=95.39 E-value=0.39 Score=49.01 Aligned_cols=169 Identities=13% Similarity=0.084 Sum_probs=96.8
Q ss_pred CceEEEEEccCCce---EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 161 QPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 161 ~~~l~~~~~~~g~~---~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..+|-+||+.+.+. .....++.+..+..+.|+|-+.. -+|++..+ +.|-..|+
T Consensus 209 ~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s----~i~ssSyD--------------GtiR~~D~------ 264 (498)
T KOG4328|consen 209 GGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTS----QIYSSSYD--------------GTIRLQDF------ 264 (498)
T ss_pred CCcEEEEecCCCCCccCceEEeccCCccccceEecCCChh----heeeeccC--------------ceeeeeee------
Confidence 47799999953321 11113566667889999998777 66665333 35777887
Q ss_pred hhhhhhhccCCCCCCceec-CC--CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC--CCcccce
Q 005093 238 ASELELKESSSEDLPVVNL-TE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN--FSSLEKI 312 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~l-t~--~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~--~~lt~~~ 312 (715)
+++..+.+ +. ......+..|+.+...++|..+-. .+-++|+.+++. ..+...
T Consensus 265 -----------~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-----------~f~~iD~R~~~s~~~~~~lh- 321 (498)
T KOG4328|consen 265 -----------EGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-----------NFNVIDLRTDGSEYENLRLH- 321 (498)
T ss_pred -----------cchhhHHHhhcCccceeeeeccccCCCccEEEeeccc-----------ceEEEEeecCCccchhhhhh-
Confidence 44444333 22 334567777888877777776542 245566655443 111111
Q ss_pred eeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE-Ee--cCCCCCceeEEEeecCC
Q 005093 313 VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL-RI--TPAESNFSWSLLTLDGD 389 (715)
Q Consensus 313 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~-~l--~~~~~~~~~~~~s~~~~ 389 (715)
..-+..+.+.|-...++.++..++...||-+.--.++.. .| ......+....|||.++
T Consensus 322 -------------------~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~g 382 (498)
T KOG4328|consen 322 -------------------KKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGG 382 (498)
T ss_pred -------------------hcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCC
Confidence 112445566666666777777666666775432123322 12 22222445568999998
Q ss_pred EEEEEE
Q 005093 390 NIIAVS 395 (715)
Q Consensus 390 ~l~~~~ 395 (715)
.|+++.
T Consensus 383 tl~TT~ 388 (498)
T KOG4328|consen 383 TLLTTC 388 (498)
T ss_pred ceEeec
Confidence 876654
No 401
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.28 E-value=0.17 Score=53.47 Aligned_cols=138 Identities=18% Similarity=0.188 Sum_probs=81.4
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHH---------HH------hCCcEEEEEcCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF---------LS------SVGYSLLIVNYRGSL 522 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~---------la------~~G~~vi~~d~rG~~ 522 (715)
....+..+..|++... ......|+||++-|||+.+.........-. |. .+-..++.+|.+-..
T Consensus 52 ~~~~~~~LFYwf~eS~--~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGv 129 (454)
T KOG1282|consen 52 NESEGRQLFYWFFESE--NNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGV 129 (454)
T ss_pred CCCCCceEEEEEEEcc--CCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcC
Confidence 3345777888877654 255668999999999976532211111000 10 111357778877555
Q ss_pred CCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh----C-----C-CceeEEEec
Q 005093 523 GFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ----A-----P-DKFVAAAAR 591 (715)
Q Consensus 523 ~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~----~-----p-~~~~~~v~~ 591 (715)
||.-+-.......-....++|...+ ++|+.+.+....+.+.|.|.|++|..+-.+|.. + | -.+++.++.
T Consensus 130 GFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IG 209 (454)
T KOG1282|consen 130 GFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIG 209 (454)
T ss_pred CccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEec
Confidence 5543221111111112235566655 457776666677899999999999766655532 2 1 257999999
Q ss_pred CCcchh
Q 005093 592 NPLCNL 597 (715)
Q Consensus 592 ~~~~~~ 597 (715)
.|+.+.
T Consensus 210 Ng~td~ 215 (454)
T KOG1282|consen 210 NGLTDP 215 (454)
T ss_pred CcccCc
Confidence 998764
No 402
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=95.27 E-value=0.92 Score=43.66 Aligned_cols=231 Identities=12% Similarity=0.166 Sum_probs=124.2
Q ss_pred ccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCC-CC-----CCeEEEEe-cC
Q 005093 4 ISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE-NE-----SPIQFELW-SQ 76 (715)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~-~~-----~~~~~~~~-~~ 76 (715)
+...+++.++.. -+++++.++. .|.+.-|....|.+...+-||-.++|+-+..+. ++ +..+|.|+ .-
T Consensus 31 vgTnslK~dNqV---hll~~d~e~s---~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~ 104 (370)
T KOG1007|consen 31 VGTNSLKEDNQV---HLLRLDSEGS---ELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPL 104 (370)
T ss_pred EeccccCCccee---EEEEecCccc---hhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEeccccc
Confidence 334445544332 3333555554 233344555668888899999888876654332 11 23466666 22
Q ss_pred Cc-----cEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCC-CCCCc--CCCC---CCCC
Q 005093 77 SQ-----LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG-GSSDK--DCNS---WKGQ 145 (715)
Q Consensus 77 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~---~~~~ 145 (715)
++ .+.+-.++....+++ ..+-|-|++.+|+-+.+.. ...+.+...+. ..... ...+ .-..
T Consensus 105 ~~S~~~tlE~v~~Ldteavg~i------~cvew~Pns~klasm~dn~---i~l~~l~ess~~vaev~ss~s~e~~~~fts 175 (370)
T KOG1007|consen 105 GQSNSSTLECVASLDTEAVGKI------NCVEWEPNSDKLASMDDNN---IVLWSLDESSKIVAEVLSSESAEMRHSFTS 175 (370)
T ss_pred CccccchhhHhhcCCHHHhCce------eeEEEcCCCCeeEEeccCc---eEEEEcccCcchheeecccccccccceecc
Confidence 32 122223333333444 7899999999998876322 11222221111 00000 1111 1123
Q ss_pred CcccC-CcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCc
Q 005093 146 GDWEE-DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 224 (715)
Q Consensus 146 ~~~~~-~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~ 224 (715)
..|.| .-|..+.......+.-||+.|.+...-........+.++.|.|+-+. ++.+...++
T Consensus 176 g~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~----~lvt~gDdg-------------- 237 (370)
T KOG1007|consen 176 GAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQH----ILVTCGDDG-------------- 237 (370)
T ss_pred cccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceE----EEEEcCCCc--------------
Confidence 44665 22555555566889999997654322210122234678889998777 776663222
Q ss_pred eEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 225 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
-|...|.- ........|..+.-+...++|.|-=.+|+.++..+
T Consensus 238 yvriWD~R---------------~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD 280 (370)
T KOG1007|consen 238 YVRIWDTR---------------KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSD 280 (370)
T ss_pred cEEEEecc---------------CCCccccccCCCceEEEEEEecCccceEEEecCCC
Confidence 24444430 02334455666666789999999888888776554
No 403
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.23 E-value=0.14 Score=54.52 Aligned_cols=62 Identities=19% Similarity=0.327 Sum_probs=47.3
Q ss_pred CcEEEEeeCCCCcCCchHHHHHHHHHHHc---------------C-----C-cEEEEEeCCCCccCCCCCchHHHHHHHH
Q 005093 649 TPTIFLLGAQDLRVPVSNGLQYARALREK---------------G-----V-ETKVIVFPNDVHGIERPQSDFESFLNIG 707 (715)
Q Consensus 649 ~P~Lii~G~~D~~v~~~~~~~~~~~l~~~---------------g-----~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 707 (715)
.++||..|..|.+||.-..+.+.+.|+=. | . ...++.+.++||... ...+.++..+-
T Consensus 348 irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp--~qP~~al~m~~ 425 (433)
T PLN03016 348 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YRPNETFIMFQ 425 (433)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC--CCHHHHHHHHH
Confidence 69999999999999999999888887511 1 1 266778889999873 34557777777
Q ss_pred HHHHH
Q 005093 708 LWFKK 712 (715)
Q Consensus 708 ~wl~~ 712 (715)
+|++.
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 78753
No 404
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=95.19 E-value=1.8 Score=41.82 Aligned_cols=136 Identities=10% Similarity=0.132 Sum_probs=72.1
Q ss_pred eEEEEEccCCc----eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 163 SLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 163 ~l~~~~~~~g~----~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
.--+||+++|. .++| ...+..+.+.+|+-+|.. +|.+- ..++.+-.+||
T Consensus 174 TCTiWdie~~~~~~vkTQL--IAHDKEV~DIaf~~~s~~-----~FASv-------------gaDGSvRmFDL------- 226 (364)
T KOG0290|consen 174 TCTIWDIETGVSGTVKTQL--IAHDKEVYDIAFLKGSRD-----VFASV-------------GADGSVRMFDL------- 226 (364)
T ss_pred eEEEEEEeeccccceeeEE--EecCcceeEEEeccCccc-----eEEEe-------------cCCCcEEEEEe-------
Confidence 34567888762 3566 466667889999997776 44432 12335677776
Q ss_pred hhhhhhccCCCCCCcee-cCCCCc---cccceeEcCCC-CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccccee
Q 005093 239 SELELKESSSEDLPVVN-LTESIS---SAFFPRFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 313 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-lt~~~~---~~~~~~~spdg-~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~ 313 (715)
...+... +.+.+. ..-..+|++.. +++|-...+ ...+.++|+.....-...
T Consensus 227 ----------R~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~d----------S~~V~iLDiR~P~tpva~---- 282 (364)
T KOG0290|consen 227 ----------RSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMD----------SNKVVILDIRVPCTPVAR---- 282 (364)
T ss_pred ----------cccccceEEecCCCCCCcceeeccCcCCchHHhhhhcC----------CceEEEEEecCCCcceeh----
Confidence 4333333 322222 12233444322 233322222 234666665442221000
Q ss_pred eeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 314 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
+. .+...+..++|.|....-+.+..++....||-++
T Consensus 283 -------------L~-~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~ 318 (364)
T KOG0290|consen 283 -------------LR-NHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ 318 (364)
T ss_pred -------------hh-cCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence 00 1334678899999888777877666655566444
No 405
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=95.19 E-value=2.6 Score=38.96 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=40.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEec-----CC-c---cEEEEecCc--cccccccCCCcccceeecCCCCeE
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-----QS-Q---LEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLI 111 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~-----~~-~---~~~~~~~~~--~~~~~~~~~~~~~~~~wSpDg~~l 111 (715)
..+.+.+|-|.|...|.-++.. .-.+...+. .+ + .-..+.+.. ...+.| ....|||+|+.|
T Consensus 33 qairav~fhp~g~lyavgsnsk--t~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsi------yc~~ws~~geli 104 (350)
T KOG0641|consen 33 QAIRAVAFHPAGGLYAVGSNSK--TFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSI------YCTAWSPCGELI 104 (350)
T ss_pred hheeeEEecCCCceEEeccCCc--eEEEEccccccCcccccccccCCCeEEeeeccccCccE------EEEEecCccCeE
Confidence 4588999999999877665543 111111111 00 0 001111111 112334 588999999999
Q ss_pred EEEeecCCCCC
Q 005093 112 AYVAEEPSPSK 122 (715)
Q Consensus 112 a~~~~~~~~~~ 122 (715)
|-.+++...+.
T Consensus 105 atgsndk~ik~ 115 (350)
T KOG0641|consen 105 ATGSNDKTIKV 115 (350)
T ss_pred EecCCCceEEE
Confidence 98877665543
No 406
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.18 E-value=1.6 Score=41.10 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=25.0
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
...+.||..|+.| ..+..+....||+=++ .|+.+++..
T Consensus 259 ~w~vSWS~sGn~L-aVs~GdNkvtlwke~~-~Gkw~~v~~ 296 (299)
T KOG1332|consen 259 VWRVSWSLSGNIL-AVSGGDNKVTLWKENV-DGKWEEVGE 296 (299)
T ss_pred eEEEEEeccccEE-EEecCCcEEEEEEeCC-CCcEEEccc
Confidence 3467799999844 4444455667887776 577776653
No 407
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=95.17 E-value=0.69 Score=47.74 Aligned_cols=96 Identities=15% Similarity=0.082 Sum_probs=59.7
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..+.+||..+..+.---......+...+.|||.... |+.+.. .+..|+.+|.
T Consensus 187 G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~----l~vsVG--------------~Dkki~~yD~---------- 238 (673)
T KOG4378|consen 187 GAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEA----LLVSVG--------------YDKKINIYDI---------- 238 (673)
T ss_pred CeEEEEeccCCCcccchhhhccCCcCcceecCCccc----eEEEec--------------ccceEEEeec----------
Confidence 558899987654321100222345667899999987 655542 3347999996
Q ss_pred hhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 242 ELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 242 ~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
.+.. ..+|+ -......++|+++|-+|+-...+ ..|+.+|+...+
T Consensus 239 -------~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~-----------G~~i~YD~R~~k 283 (673)
T KOG4378|consen 239 -------RSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSK-----------GELIAYDMRSTK 283 (673)
T ss_pred -------ccccccceee-ecCCcceeeecCCceEEEeecCC-----------ceEEEEecccCC
Confidence 3222 22333 23346779999999988754443 358899987644
No 408
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=95.11 E-value=3.5 Score=39.97 Aligned_cols=86 Identities=14% Similarity=0.162 Sum_probs=57.5
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|-|||.+|-+.... ..-+..+..-+|||=... |. |+-++ .+..+|-+.|+
T Consensus 124 htlKVWDtnTlQ~a~~--F~me~~VYshamSp~a~s-Hc-LiA~g--------------tr~~~VrLCDi---------- 175 (397)
T KOG4283|consen 124 HTLKVWDTNTLQEAVD--FKMEGKVYSHAMSPMAMS-HC-LIAAG--------------TRDVQVRLCDI---------- 175 (397)
T ss_pred ceEEEeecccceeeEE--eecCceeehhhcChhhhc-ce-EEEEe--------------cCCCcEEEEec----------
Confidence 6799999877654433 223334555678884432 11 22222 24457889998
Q ss_pred hhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 242 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 242 ~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
++|.. ..|..+...+-.+.|||...+++++...+
T Consensus 176 -------~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaD 210 (397)
T KOG4283|consen 176 -------ASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSAD 210 (397)
T ss_pred -------cCCcceeeeccccCceEEEEeccCceeEEEecCCC
Confidence 66665 57788888899999999999998887664
No 409
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=95.08 E-value=2.4 Score=41.09 Aligned_cols=28 Identities=18% Similarity=0.377 Sum_probs=20.5
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 005093 341 LSDGCTMLLSSIWGSSQVIISVNVSSGELLR 371 (715)
Q Consensus 341 ~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 371 (715)
..++..+++.+ . ..+|+.+|++||+...
T Consensus 209 ~~~~~~l~~~~-~--~~~l~~~d~~tG~~~W 236 (238)
T PF13360_consen 209 SVDGGTLYVTS-S--DGRLYALDLKTGKVVW 236 (238)
T ss_dssp ECCCTEEEEEE-T--TTEEEEEETTTTEEEE
T ss_pred eeeCCEEEEEe-C--CCEEEEEECCCCCEEe
Confidence 45666677665 2 3689999999998764
No 410
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.07 E-value=0.26 Score=46.35 Aligned_cols=234 Identities=12% Similarity=0.091 Sum_probs=130.7
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEec-Cccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV-PQTVHGSV 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 93 (715)
...|++++++++.. .+.-.+=... ...-..+||++-.-++++...+ ++-++|.......+.+..+. ... |
T Consensus 37 ~G~L~ile~~~~~g--i~e~~s~d~~--D~LfdV~Wse~~e~~~~~a~GD-GSLrl~d~~~~s~Pi~~~kEH~~E----V 107 (311)
T KOG0277|consen 37 NGRLFILEVTDPKG--IQECQSYDTE--DGLFDVAWSENHENQVIAASGD-GSLRLFDLTMPSKPIHKFKEHKRE----V 107 (311)
T ss_pred CceEEEEecCCCCC--eEEEEeeecc--cceeEeeecCCCcceEEEEecC-ceEEEeccCCCCcchhHHHhhhhh----e
Confidence 45677766653332 2221111111 4467789999999988887765 66566654322222222211 111 2
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
.++.|++-.+++...+. | ...|-+|+..-++
T Consensus 108 ------~Svdwn~~~r~~~ltsS-----------------------------------W--------D~TiKLW~~~r~~ 138 (311)
T KOG0277|consen 108 ------YSVDWNTVRRRIFLTSS-----------------------------------W--------DGTIKLWDPNRPN 138 (311)
T ss_pred ------EEeccccccceeEEeec-----------------------------------c--------CCceEeecCCCCc
Confidence 57889988777766531 1 1456677664333
Q ss_pred -eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 174 -VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 174 -~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
++.. ...+..+.+..|||--.. ++-++..++ ...||-++ ..|.
T Consensus 139 Sv~Tf--~gh~~~Iy~a~~sp~~~n----lfas~Sgd~------------~l~lwdvr------------------~~gk 182 (311)
T KOG0277|consen 139 SVQTF--NGHNSCIYQAAFSPHIPN----LFASASGDG------------TLRLWDVR------------------SPGK 182 (311)
T ss_pred ceEee--cCCccEEEEEecCCCCCC----eEEEccCCc------------eEEEEEec------------------CCCc
Confidence 2222 233446778999997666 544432211 12455555 3355
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
...+..+...+-.-.||.-...+++++..+. -|+.+|+..-.. .+ .... .+.
T Consensus 183 ~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~----------~vr~wDir~~r~-pl----------~eL~-------gh~ 234 (311)
T KOG0277|consen 183 FMSIEAHNSEILCCDWSKYNHNVLATGGVDN----------LVRGWDIRNLRT-PL----------FELN-------GHG 234 (311)
T ss_pred eeEEEeccceeEeecccccCCcEEEecCCCc----------eEEEEehhhccc-cc----------eeec-------CCc
Confidence 5556555556667789988888888876652 366677655221 00 0000 011
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
..+..+.|||....++.+.+-+-..+||......+.++
T Consensus 235 ~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e 272 (311)
T KOG0277|consen 235 LAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIE 272 (311)
T ss_pred eEEEEEecCcchhhHhhhccccceEEecccccchhhhh
Confidence 23456779998888888887777778886554333333
No 411
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=95.02 E-value=1.4 Score=42.42 Aligned_cols=175 Identities=17% Similarity=0.112 Sum_probs=101.2
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
...|-.+|..+|++.... .........+..-|||.. .+.-. . ..|.++|-
T Consensus 82 ~gaiGhLdP~tGev~~yp-Lg~Ga~Phgiv~gpdg~~----Witd~---------------~-~aI~R~dp--------- 131 (353)
T COG4257 82 TGAIGHLDPATGEVETYP-LGSGASPHGIVVGPDGSA----WITDT---------------G-LAIGRLDP--------- 131 (353)
T ss_pred cccceecCCCCCceEEEe-cCCCCCCceEEECCCCCe----eEecC---------------c-ceeEEecC---------
Confidence 367889999999988773 233334456677899885 33211 1 26888884
Q ss_pred hhhhccCCCCCCceecCC----CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeee
Q 005093 241 LELKESSSEDLPVVNLTE----SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 316 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~----~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~ 316 (715)
++.+.++.+- .......+.|.++|. |.|+... |... ++|-..+. +
T Consensus 132 --------kt~evt~f~lp~~~a~~nlet~vfD~~G~-lWFt~q~-----G~yG------rLdPa~~~-----------i 180 (353)
T COG4257 132 --------KTLEVTRFPLPLEHADANLETAVFDPWGN-LWFTGQI-----GAYG------RLDPARNV-----------I 180 (353)
T ss_pred --------cccceEEeecccccCCCcccceeeCCCcc-EEEeecc-----ccce------ecCcccCc-----------e
Confidence 5666655432 234578899999997 8888775 2211 22221111 1
Q ss_pred eceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--CceeEEEeecCCEEEEE
Q 005093 317 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--~~~~~~~s~~~~~l~~~ 394 (715)
.++..... .+...++-.|||+ +++++..+ +.|-++|+.++..+.+..... .-+...++..=+++.++
T Consensus 181 ~vfpaPqG--------~gpyGi~atpdGs-vwyaslag--naiaridp~~~~aev~p~P~~~~~gsRriwsdpig~~wit 249 (353)
T COG4257 181 SVFPAPQG--------GGPYGICATPDGS-VWYASLAG--NAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWIT 249 (353)
T ss_pred eeeccCCC--------CCCcceEECCCCc-EEEEeccc--cceEEcccccCCcceecCCCcccccccccccCccCcEEEe
Confidence 11111110 1356778899997 77765533 579999999998887765544 11222333222344444
Q ss_pred EeCCCCCCeEEEEeec
Q 005093 395 SSSPVDVPQVKYGYFV 410 (715)
Q Consensus 395 ~~~~~~p~~l~~~~~~ 410 (715)
.. ....+++++..
T Consensus 250 --tw-g~g~l~rfdPs 262 (353)
T COG4257 250 --TW-GTGSLHRFDPS 262 (353)
T ss_pred --cc-CCceeeEeCcc
Confidence 22 33447777754
No 412
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=94.95 E-value=2.3 Score=41.03 Aligned_cols=143 Identities=13% Similarity=0.073 Sum_probs=80.0
Q ss_pred cceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecC-C---C-
Q 005093 186 VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-E---S- 259 (715)
Q Consensus 186 ~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt-~---~- 259 (715)
+.-+.|-|++.+ ++-.. .++|.+++++ ++.++ ..+. . +
T Consensus 126 i~cvew~Pns~k----lasm~----------------dn~i~l~~l~----------------ess~~vaev~ss~s~e~ 169 (370)
T KOG1007|consen 126 INCVEWEPNSDK----LASMD----------------DNNIVLWSLD----------------ESSKIVAEVLSSESAEM 169 (370)
T ss_pred eeeEEEcCCCCe----eEEec----------------cCceEEEEcc----------------cCcchheeecccccccc
Confidence 456789999999 88765 1357777762 23331 1111 1 1
Q ss_pred CccccceeEcC--CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-CcccceeeeeeceecCCCCCccccccCCCC
Q 005093 260 ISSAFFPRFSP--DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 336 (715)
Q Consensus 260 ~~~~~~~~~sp--dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~ 336 (715)
.....+-+||| ||.+++-++... |.-+|+.+-... .+. .. +.-.+.
T Consensus 170 ~~~ftsg~WspHHdgnqv~tt~d~t------------l~~~D~RT~~~~~sI~-dA------------------Hgq~vr 218 (370)
T KOG1007|consen 170 RHSFTSGAWSPHHDGNQVATTSDST------------LQFWDLRTMKKNNSIE-DA------------------HGQRVR 218 (370)
T ss_pred cceecccccCCCCccceEEEeCCCc------------EEEEEccchhhhcchh-hh------------------hcceee
Confidence 22467788998 999998776553 677777653221 110 00 111245
Q ss_pred CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 337 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 337 ~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
++.|.|+-..++++..+++..+||-....+-.++.+.....=+....|.+..++|+.+.
T Consensus 219 dlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~ 277 (370)
T KOG1007|consen 219 DLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSG 277 (370)
T ss_pred eccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEec
Confidence 67788888888888777776777643332233333433322122234556566666544
No 413
>PLN02209 serine carboxypeptidase
Probab=94.87 E-value=0.23 Score=52.92 Aligned_cols=61 Identities=16% Similarity=0.276 Sum_probs=46.7
Q ss_pred CcEEEEeeCCCCcCCchHHHHHHHHHHHc---------------C-----Cc-EEEEEeCCCCccCCCCCchHHHHHHHH
Q 005093 649 TPTIFLLGAQDLRVPVSNGLQYARALREK---------------G-----VE-TKVIVFPNDVHGIERPQSDFESFLNIG 707 (715)
Q Consensus 649 ~P~Lii~G~~D~~v~~~~~~~~~~~l~~~---------------g-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~ 707 (715)
.++||..|..|.+|+.-.++++.+.|+=. | .. ..++.+.++||... ...+.++..+-
T Consensus 352 irVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp--~qP~~al~m~~ 429 (437)
T PLN02209 352 YRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE--YLPEESSIMFQ 429 (437)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC--cCHHHHHHHHH
Confidence 68999999999999999999988887611 1 12 66777889999873 35557777777
Q ss_pred HHHH
Q 005093 708 LWFK 711 (715)
Q Consensus 708 ~wl~ 711 (715)
+|+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 7774
No 414
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=94.85 E-value=1 Score=49.88 Aligned_cols=95 Identities=19% Similarity=0.230 Sum_probs=61.6
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCC---ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQS---QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
....++||.++++|-....+ + ..+| +-| .....+.+-.. +..| ..++||+||.+|+-.
T Consensus 208 ~t~~~~spn~~~~Aa~d~dG----r-I~vw~d~~~~~~~~t~t~lHWH-~~~V------~~L~fS~~G~~LlSG------ 269 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDG----R-ILVWRDFGSSDDSETCTLLHWH-HDEV------NSLSFSSDGAYLLSG------ 269 (792)
T ss_pred ceeEEeccccceEEEeccCC----c-EEEEeccccccccccceEEEec-cccc------ceeEEecCCceEeec------
Confidence 56689999999998654432 3 4456 322 11111111010 1222 799999999988662
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
| ....|.+|.+++++.+-| .--...+.++.||||+..
T Consensus 270 --------------------------------G------~E~VLv~Wq~~T~~kqfL--PRLgs~I~~i~vS~ds~~ 306 (792)
T KOG1963|consen 270 --------------------------------G------REGVLVLWQLETGKKQFL--PRLGSPILHIVVSPDSDL 306 (792)
T ss_pred --------------------------------c------cceEEEEEeecCCCcccc--cccCCeeEEEEEcCCCCe
Confidence 1 237799999999996666 333456889999999997
No 415
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=94.82 E-value=0.18 Score=54.78 Aligned_cols=139 Identities=11% Similarity=0.048 Sum_probs=88.5
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|-.||+...+-.... ....-.+.++.|||--.. ..++....+ -|-.+|+
T Consensus 156 g~vK~~DlR~~~S~~t~-~~nSESiRDV~fsp~~~~----~F~s~~dsG--------------~lqlWDl---------- 206 (839)
T KOG0269|consen 156 GTVKCWDLRSKKSKSTF-RSNSESIRDVKFSPGYGN----KFASIHDSG--------------YLQLWDL---------- 206 (839)
T ss_pred ceEEEEeeecccccccc-cccchhhhceeeccCCCc----eEEEecCCc--------------eEEEeec----------
Confidence 66888888766554442 122336889999995543 444432221 3444454
Q ss_pred hhhccCCCC-CCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCc-ccceeeeeece
Q 005093 242 ELKESSSED-LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-LEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~-~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~l-t~~~~~~~~~~ 319 (715)
++. .-..+++.+.+...-..|+|++.+||-.+ ++ ..+.++++.+.....+ |-.. +
T Consensus 207 ------Rqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGG-RD----------K~vkiWd~t~~~~~~~~tInT--i---- 263 (839)
T KOG0269|consen 207 ------RQPDRCEKKLTAHNGPVLCLNWHPNREWLATGG-RD----------KMVKIWDMTDSRAKPKHTINT--I---- 263 (839)
T ss_pred ------cCchhHHHHhhcccCceEEEeecCCCceeeecC-CC----------ccEEEEeccCCCccceeEEee--c----
Confidence 233 33467888888888899999999888555 32 3477788776555332 1111 0
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
..+..+.|.|+..+.+.+..-.+...++.+|+.
T Consensus 264 -------------apv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr 296 (839)
T KOG0269|consen 264 -------------APVGRVKWRPARSYHLATCSMVVDTSVHVWDVR 296 (839)
T ss_pred -------------ceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence 135677899998877777776677788888874
No 416
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=94.80 E-value=3.3 Score=38.26 Aligned_cols=140 Identities=13% Similarity=0.146 Sum_probs=80.0
Q ss_pred CceEEEEEccCCc-eEeecCC-----CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccc
Q 005093 161 QPSLFVININSGE-VQAVKGI-----PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 234 (715)
Q Consensus 161 ~~~l~~~~~~~g~-~~~l~~~-----~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 234 (715)
...|..||+.-.. +..+... -.+..+..++-.|.|+- +.++.. ++.-.++|+
T Consensus 203 dktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrl-----l~sg~~--------------dssc~lydi--- 260 (350)
T KOG0641|consen 203 DKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRL-----LASGHA--------------DSSCMLYDI--- 260 (350)
T ss_pred CceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcce-----eeeccC--------------CCceEEEEe---
Confidence 3668888885433 3333211 11224556778899984 444422 224556665
Q ss_pred cchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccccee
Q 005093 235 KSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 313 (715)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~ 313 (715)
.++. +++.......++.++|||..-+|+-.+.+. .|.+-|+++.-..+|..-.
T Consensus 261 --------------rg~r~iq~f~phsadir~vrfsp~a~yllt~syd~-----------~ikltdlqgdla~el~~~v- 314 (350)
T KOG0641|consen 261 --------------RGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDM-----------KIKLTDLQGDLAHELPIMV- 314 (350)
T ss_pred --------------eCCceeeeeCCCccceeEEEeCCCceEEEEecccc-----------eEEEeecccchhhcCceEE-
Confidence 5554 455666666789999999988887666553 4778888886665553211
Q ss_pred eeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 314 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
+.+-++. .-...|.|..- -+++++.+....||.++
T Consensus 315 -----v~ehkdk---------~i~~rwh~~d~-sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 315 -----VAEHKDK---------AIQCRWHPQDF-SFISSSADKTATLWALN 349 (350)
T ss_pred -----EEeccCc---------eEEEEecCccc-eeeeccCcceEEEeccC
Confidence 1111111 22456887652 34444445556788764
No 417
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=94.78 E-value=0.39 Score=52.32 Aligned_cols=125 Identities=14% Similarity=0.174 Sum_probs=71.8
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCcc-EEEEecCcccc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL-EKEFHVPQTVH 90 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 90 (715)
...+..|..+|+.......+ +..--..++.++|||--....+.... +|.-|+|.|....+- .+++.. .
T Consensus 152 GSQDg~vK~~DlR~~~S~~t------~~~nSESiRDV~fsp~~~~~F~s~~d-sG~lqlWDlRqp~r~~~k~~AH----~ 220 (839)
T KOG0269|consen 152 GSQDGTVKCWDLRSKKSKST------FRSNSESIRDVKFSPGYGNKFASIHD-SGYLQLWDLRQPDRCEKKLTAH----N 220 (839)
T ss_pred cCCCceEEEEeeeccccccc------ccccchhhhceeeccCCCceEEEecC-CceEEEeeccCchhHHHHhhcc----c
Confidence 34666777777766654222 11112458999999976555443333 244444444321111 122221 1
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
| ....+.|+|++.+||-.. +...+.+|+..
T Consensus 221 G------pV~c~nwhPnr~~lATGG--------------------------------------------RDK~vkiWd~t 250 (839)
T KOG0269|consen 221 G------PVLCLNWHPNREWLATGG--------------------------------------------RDKMVKIWDMT 250 (839)
T ss_pred C------ceEEEeecCCCceeeecC--------------------------------------------CCccEEEEecc
Confidence 2 226899999999998742 22568888887
Q ss_pred CCceEeecCCCCCCccceEEEecCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
+++...+-....-.++..+.|-|+-+.
T Consensus 251 ~~~~~~~~tInTiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 251 DSRAKPKHTINTIAPVGRVKWRPARSY 277 (839)
T ss_pred CCCccceeEEeecceeeeeeeccCccc
Confidence 766544311223346778999998887
No 418
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=94.77 E-value=0.27 Score=48.62 Aligned_cols=144 Identities=17% Similarity=0.238 Sum_probs=80.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCc-cEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
..+....++|--..|+-....+ . .+++.+ ..+. ..+++. .-.. +.++|+| +-..+.++++
T Consensus 188 Dti~svkfNpvETsILas~~sD-r--sIvLyD~R~~~Pl~KVi~-~mRT----------N~IswnP-eafnF~~a~E--- 249 (433)
T KOG0268|consen 188 DSISSVKFNPVETSILASCASD-R--SIVLYDLRQASPLKKVIL-TMRT----------NTICWNP-EAFNFVAANE--- 249 (433)
T ss_pred CceeEEecCCCcchheeeeccC-C--ceEEEecccCCccceeee-eccc----------cceecCc-cccceeeccc---
Confidence 5678889999887776443322 2 355555 3333 333433 2222 6899999 3333333222
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc-eEeecCCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
..+||.+|...-+ +..+- ......+.++.|||-|+.
T Consensus 250 ----------------------------------------D~nlY~~DmR~l~~p~~v~-~dhvsAV~dVdfsptG~E-- 286 (433)
T KOG0268|consen 250 ----------------------------------------DHNLYTYDMRNLSRPLNVH-KDHVSAVMDVDFSPTGQE-- 286 (433)
T ss_pred ----------------------------------------cccceehhhhhhcccchhh-cccceeEEEeccCCCcch--
Confidence 2678888764321 11120 111224668899999999
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC--CccccceeEcCCCCeEEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~--~~~~~~~~~spdg~~l~~ 277 (715)
++-.+. .+ .|-.+.. ..+..+-+--. =..+..+.||-|.++|+-
T Consensus 287 --fvsgsy-------------Dk--sIRIf~~-----------------~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~S 332 (433)
T KOG0268|consen 287 --FVSGSY-------------DK--SIRIFPV-----------------NHGHSRDIYHTKRMQHVFCVKYSMDSKYIIS 332 (433)
T ss_pred --hccccc-------------cc--eEEEeec-----------------CCCcchhhhhHhhhheeeEEEEeccccEEEe
Confidence 776552 12 3444443 33444333222 235788999999998865
Q ss_pred EecC
Q 005093 278 LSAK 281 (715)
Q Consensus 278 ~~~~ 281 (715)
.|.+
T Consensus 333 GSdd 336 (433)
T KOG0268|consen 333 GSDD 336 (433)
T ss_pred cCCC
Confidence 5544
No 419
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=94.72 E-value=5.1 Score=39.97 Aligned_cols=183 Identities=14% Similarity=0.112 Sum_probs=101.4
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEE-EecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKE-FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+.+.+...++-|-.++++--+.+ ....|| .+|+.... +-.-..+ .++++|+--.+++...++
T Consensus 150 HlgWVr~vavdP~n~wf~tgs~D-----rtikIwDlatg~LkltltGhi~~v----------r~vavS~rHpYlFs~ged 214 (460)
T KOG0285|consen 150 HLGWVRSVAVDPGNEWFATGSAD-----RTIKIWDLATGQLKLTLTGHIETV----------RGVAVSKRHPYLFSAGED 214 (460)
T ss_pred ccceEEEEeeCCCceeEEecCCC-----ceeEEEEcccCeEEEeecchhhee----------eeeeecccCceEEEecCC
Confidence 45778888888988887744332 345566 45554322 2122222 688899888877655444
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
... .-|.+.+.+.........+-...+...|-..-.+...+...+.+||..+....-.- .-....+..+.+.|-...
T Consensus 215 k~V--KCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l-~GH~~~V~~V~~~~~dpq 291 (460)
T KOG0285|consen 215 KQV--KCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVL-SGHTNPVASVMCQPTDPQ 291 (460)
T ss_pred Cee--EEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEe-cCCCCcceeEEeecCCCc
Confidence 322 12333322222222211111111111111111112224578999999887544331 223345777788876665
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
|+..+ -+..|.+.|+ +.+.+...+|.+..........|+-..+|
T Consensus 292 ----vit~S---------------~D~tvrlWDl----------------~agkt~~tlt~hkksvral~lhP~e~~fA 335 (460)
T KOG0285|consen 292 ----VITGS---------------HDSTVRLWDL----------------RAGKTMITLTHHKKSVRALCLHPKENLFA 335 (460)
T ss_pred ----eEEec---------------CCceEEEeee----------------ccCceeEeeecccceeeEEecCCchhhhh
Confidence 66554 2235777777 36778888999999999899998765443
No 420
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=94.71 E-value=2 Score=44.37 Aligned_cols=139 Identities=12% Similarity=0.138 Sum_probs=79.2
Q ss_pred ceEEEEEccCCc-eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~-~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..+-++|.++.. ++.+ -....++....|+|++.. ++.++..+.. ..+|.++
T Consensus 90 G~V~vfD~k~r~iLR~~--~ah~apv~~~~f~~~d~t----~l~s~sDd~v------------~k~~d~s---------- 141 (487)
T KOG0310|consen 90 GHVKVFDMKSRVILRQL--YAHQAPVHVTKFSPQDNT----MLVSGSDDKV------------VKYWDLS---------- 141 (487)
T ss_pred CcEEEeccccHHHHHHH--hhccCceeEEEecccCCe----EEEecCCCce------------EEEEEcC----------
Confidence 668888855422 3444 234445667789999987 6665532211 1333333
Q ss_pred hhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 241 LELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 241 ~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
++.. ..|+.+...++..+|+|-...++++..=+ ..+.++|+........+.+
T Consensus 142 ---------~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYD----------g~vrl~DtR~~~~~v~eln-------- 194 (487)
T KOG0310|consen 142 ---------TAYVQAELSGHTDYVRCGDISPANDHIVVTGSYD----------GKVRLWDTRSLTSRVVELN-------- 194 (487)
T ss_pred ---------CcEEEEEecCCcceeEeeccccCCCeEEEecCCC----------ceEEEEEeccCCceeEEec--------
Confidence 3333 25667777899999999988888776432 2366677655332211110
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
+...+..+.+.|.|..| .+ .+.+.+-.||+-+|...
T Consensus 195 -----------hg~pVe~vl~lpsgs~i-as---AgGn~vkVWDl~~G~ql 230 (487)
T KOG0310|consen 195 -----------HGCPVESVLALPSGSLI-AS---AGGNSVKVWDLTTGGQL 230 (487)
T ss_pred -----------CCCceeeEEEcCCCCEE-EE---cCCCeEEEEEecCCcee
Confidence 11235567788888744 33 23345556687655543
No 421
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=94.58 E-value=5.1 Score=39.39 Aligned_cols=66 Identities=12% Similarity=0.203 Sum_probs=39.6
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+.+..-+|++|++.+|...+.. .-.+|.+ .+.+.-...+.- ..|+. .++.+.|+|.+.+|.-.+.+
T Consensus 11 ~pitchAwn~drt~iAv~~~~~--evhiy~~-~~~~~w~~~htl-s~Hd~-----~vtgvdWap~snrIvtcs~d 76 (361)
T KOG1523|consen 11 EPITCHAWNSDRTQIAVSPNNH--EVHIYSM-LGADLWEPAHTL-SEHDK-----IVTGVDWAPKSNRIVTCSHD 76 (361)
T ss_pred CceeeeeecCCCceEEeccCCc--eEEEEEe-cCCCCceeceeh-hhhCc-----ceeEEeecCCCCceeEccCC
Confidence 4567789999999999876652 2234433 333322222221 12211 23789999999999876543
No 422
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=94.48 E-value=1.5 Score=43.85 Aligned_cols=117 Identities=16% Similarity=0.186 Sum_probs=70.5
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ec
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VK 178 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~ 178 (715)
..+.|||..+.+++++..+ ..|.+||...+.... +.
T Consensus 261 EDLqWSptE~~vfaScS~D-------------------------------------------gsIrIWDiRs~~~~~~~~ 297 (440)
T KOG0302|consen 261 EDLQWSPTEDGVFASCSCD-------------------------------------------GSIRIWDIRSGPKKAAVS 297 (440)
T ss_pred hhhccCCccCceEEeeecC-------------------------------------------ceEEEEEecCCCccceeE
Confidence 7999999999998876543 568889987773222 11
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-CceecC
Q 005093 179 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLT 257 (715)
Q Consensus 179 ~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt 257 (715)
....+..+.-++|+-+-.. |++-. .+ +.+-+.||- + ...+ .+....
T Consensus 298 ~kAh~sDVNVISWnr~~~l----LasG~-Dd--------------Gt~~iwDLR----------~----~~~~~pVA~fk 344 (440)
T KOG0302|consen 298 TKAHNSDVNVISWNRREPL----LASGG-DD--------------GTLSIWDLR----------Q----FKSGQPVATFK 344 (440)
T ss_pred eeccCCceeeEEccCCcce----eeecC-CC--------------ceEEEEEhh----------h----ccCCCcceeEE
Confidence 0222335667788866554 55443 11 234444540 0 1233 333455
Q ss_pred CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 258 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 258 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
-+...+.++.|+|....++-++..+ .+|.++|++.
T Consensus 345 ~Hk~pItsieW~p~e~s~iaasg~D----------~QitiWDlsv 379 (440)
T KOG0302|consen 345 YHKAPITSIEWHPHEDSVIAASGED----------NQITIWDLSV 379 (440)
T ss_pred eccCCeeEEEeccccCceEEeccCC----------CcEEEEEeec
Confidence 5677899999999776665555443 3566677654
No 423
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.47 E-value=1.4 Score=44.75 Aligned_cols=222 Identities=14% Similarity=0.106 Sum_probs=121.2
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
+...|+|+.+-..+.. ..........+.+.||.++.+-.+-. -..+ ...............+..|.+....
T Consensus 36 ~s~k~Iv~~~gWag~~--~r~l~ky~~~Yq~~g~~~~~~tap~~---~~~~----~~s~~~~sl~~~~~~l~~L~~~~~~ 106 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAI--DRNLMKYSKIYQDKGYIVVRITAPCP---SVFL----SASRRILSLSLASTRLSELLSDYNS 106 (350)
T ss_pred CccccEEEEeeecccc--chhHHHHHHHHhcCCceEEEecCccc---cccc----ccccccchhhHHHHHHHHHhhhccC
Confidence 3445877777553332 23445566777899999988776541 1111 1222222344554566666665557
Q ss_pred CCceEEEEEeChhHHHHHHHH---h-hC-CC---ceeEEEecC-Ccchh-----hhhccCCCCCC----ce----eeecc
Q 005093 558 NPSKVTVVGGSHGGFLTTHLI---G-QA-PD---KFVAAAARN-PLCNL-----ALMVGTTDIPD----WC----YVESY 615 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a---~-~~-p~---~~~~~v~~~-~~~~~-----~~~~~~~~~~~----~~----~~~~~ 615 (715)
|+.++..--.|+||...+... . ++ |. ++.+.+..+ |.... ........... |. ....+
T Consensus 107 ~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~ 186 (350)
T KOG2521|consen 107 DPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLL 186 (350)
T ss_pred CcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEE
Confidence 889999999999998665443 1 12 21 233333222 22110 00000000000 00 00000
Q ss_pred ---C----CCCCCCCCCC-CC---hhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 616 ---G----SKGKDSFTES-PS---VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 616 ---~----~~~~~~~~~~-~~---~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
+ .......+.. .. ......+. ........+.+.+.+..|.++|.++.+++.+..+..|..++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~-----~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~ 261 (350)
T KOG2521|consen 187 TMAGNEGGAYLLGPLAEKISMSRKYHFLDRYE-----EQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSV 261 (350)
T ss_pred EeeecccchhhhhhhhhccccccchHHHHHHH-----hhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEe
Confidence 0 0000000000 00 00000000 0011123577888899999999999999999999999999999
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
-+.+..|............+...+|++..
T Consensus 262 ~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 262 KFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred eccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 99999998766666778899999999864
No 424
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=94.39 E-value=5.8 Score=44.29 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=47.3
Q ss_pred CCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCccccee
Q 005093 26 ENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGIS 103 (715)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (715)
...+.+.|-|.- ..+...+||+||.+|+-. +...++.+| .+++.+-|-.+...+ ..+.
T Consensus 240 ~~~t~t~lHWH~-----~~V~~L~fS~~G~~LlSG-----G~E~VLv~Wq~~T~~kqfLPRLgs~I----------~~i~ 299 (792)
T KOG1963|consen 240 DSETCTLLHWHH-----DEVNSLSFSSDGAYLLSG-----GREGVLVLWQLETGKKQFLPRLGSPI----------LHIV 299 (792)
T ss_pred ccccceEEEecc-----cccceeEEecCCceEeec-----ccceEEEEEeecCCCcccccccCCee----------EEEE
Confidence 334445555554 567889999999988632 555788899 344433233333333 7999
Q ss_pred ecCCCCeEEEEeec
Q 005093 104 WNSDETLIAYVAEE 117 (715)
Q Consensus 104 wSpDg~~la~~~~~ 117 (715)
||||+...+.+.++
T Consensus 300 vS~ds~~~sl~~~D 313 (792)
T KOG1963|consen 300 VSPDSDLYSLVLED 313 (792)
T ss_pred EcCCCCeEEEEecC
Confidence 99999988776553
No 425
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.29 E-value=0.15 Score=54.90 Aligned_cols=129 Identities=15% Similarity=0.100 Sum_probs=80.4
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCCCc----hhhh--hcCC
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFG----EEAL--QSLP 533 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~~g----~~~~--~~~~ 533 (715)
..|.-.+++|.+.. .. ++.+=||++.. ...+.. .+..-..+||+++.-|-- ..+.. .++. ....
T Consensus 15 ~~i~fev~LP~~WN----gR-~~~~GgGG~~G-~i~~~~~~~~~~~~~~~G~A~~~TD~G-h~~~~~~~~~~~~~n~~~~ 87 (474)
T PF07519_consen 15 PNIRFEVWLPDNWN----GR-FLQVGGGGFAG-GINYADGKASMATALARGYATASTDSG-HQGSAGSDDASFGNNPEAL 87 (474)
T ss_pred ceEEEEEECChhhc----cC-eEEECCCeeeC-cccccccccccchhhhcCeEEEEecCC-CCCCcccccccccCCHHHH
Confidence 35666788897432 12 44444444432 222221 134446899999999932 11110 1111 0011
Q ss_pred CCCCccchhhHHHHHHHHHHcC-CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 598 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~-~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 598 (715)
.+++...+.+...+-+.|++.. ...+++-+..|.|-||-.++.+|.++|+.|.++++.+|..++.
T Consensus 88 ~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 88 LDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHH
Confidence 2333444556666666676653 3567889999999999999999999999999999999988763
No 426
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=94.27 E-value=2.2 Score=41.89 Aligned_cols=63 Identities=10% Similarity=0.152 Sum_probs=42.2
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEE---EEecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEK---EFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
...+...-|+|.+.+|.-.+.+ .+..+|....+++-.+ +..+.... ..+.|||.+.++|..+.
T Consensus 55 d~~vtgvdWap~snrIvtcs~d--rnayVw~~~~~~~WkptlvLlRiNrAA----------t~V~WsP~enkFAVgSg 120 (361)
T KOG1523|consen 55 DKIVTGVDWAPKSNRIVTCSHD--RNAYVWTQPSGGTWKPTLVLLRINRAA----------TCVKWSPKENKFAVGSG 120 (361)
T ss_pred CcceeEEeecCCCCceeEccCC--CCccccccCCCCeeccceeEEEeccce----------eeEeecCcCceEEeccC
Confidence 3567889999999999866544 3445666544554333 23333333 68999999999998644
No 427
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.26 E-value=0.11 Score=45.95 Aligned_cols=53 Identities=15% Similarity=0.243 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-------CCceeEEEecCCcc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-------PDKFVAAAARNPLC 595 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-------p~~~~~~v~~~~~~ 595 (715)
.+.+.+.++.+.++.. ..+|.+.|||+||.+|..++... +..+.+....+|.+
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 4456666666666642 47899999999999999887642 13456666555543
No 428
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=94.23 E-value=4.1 Score=43.24 Aligned_cols=116 Identities=11% Similarity=0.051 Sum_probs=58.0
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
.+....|+-||=.++..... .++|++||.+.+...+- .. .|...+..+.|.
T Consensus 230 svTal~F~d~gL~~aVGts~-----------G~v~iyDLRa~~pl~~k------------dh------~~e~pi~~l~~~ 280 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTST-----------GSVLIYDLRASKPLLVK------------DH------GYELPIKKLDWQ 280 (703)
T ss_pred cceEEEecCCceeEEeeccC-----------CcEEEEEcccCCceeec------------cc------CCccceeeeccc
Confidence 47788898888877765544 25899999886653221 11 122335566775
Q ss_pred cCCCE-EEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 342 SDGCT-MLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 342 ~dg~~-l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+.+.. .+++ .+.. .|-.||..+|+.-.......++...-+-++++-+++.-.++..+ ..|.=+++
T Consensus 281 ~~~~q~~v~S-~Dk~--~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~-~yyiP~LG 346 (703)
T KOG2321|consen 281 DTDQQNKVVS-MDKR--ILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMH-TYYIPSLG 346 (703)
T ss_pred ccCCCceEEe-cchH--HhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcce-eEEccccC
Confidence 54221 2232 2222 23334666777655444433333223334444444433333332 24443443
No 429
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=94.11 E-value=0.78 Score=47.02 Aligned_cols=217 Identities=15% Similarity=0.107 Sum_probs=108.1
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
|.+.+.+-||+|.+|+--. .+.++| +| .+|..-.+.. .... .++.+.||-||..|+-.+.+...
T Consensus 82 g~v~al~s~n~G~~l~ag~----i~g~lY-lWelssG~LL~v~~---aHYQ------~ITcL~fs~dgs~iiTgskDg~V 147 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGT----ISGNLY-LWELSSGILLNVLS---AHYQ------SITCLKFSDDGSHIITGSKDGAV 147 (476)
T ss_pred cceeeeecCCCceEEEeec----ccCcEE-EEEeccccHHHHHH---hhcc------ceeEEEEeCCCcEEEecCCCccE
Confidence 6678888999998886321 122444 35 4555433321 1111 12678888888877655444333
Q ss_pred CCCCcc-CCC------CCCCCCCcCCCCCCCCCcccCC--cCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEE
Q 005093 121 SKPTFS-LGS------TKGGSSDKDCNSWKGQGDWEED--WGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW 191 (715)
Q Consensus 121 ~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~ 191 (715)
...... +.. ...-..+.+....+.++..... -+..+.......+.+||+.+|.+..- ...+..+..+..
T Consensus 148 ~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlt--i~fp~si~av~l 225 (476)
T KOG0646|consen 148 LVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLT--ITFPSSIKAVAL 225 (476)
T ss_pred EEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEE--EecCCcceeEEE
Confidence 221111 000 0000111122222211111100 01122222347899999999976433 344456778888
Q ss_pred ecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc--cccceeEc
Q 005093 192 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFS 269 (715)
Q Consensus 192 spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~~~~s 269 (715)
.|-++ .+|.+.+++ .||..++-.-+....+++...-....-+...+..+.+ .+.-.+.|
T Consensus 226 Dpae~-----~~yiGt~~G--------------~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais 286 (476)
T KOG0646|consen 226 DPAER-----VVYIGTEEG--------------KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIS 286 (476)
T ss_pred ccccc-----EEEecCCcc--------------eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEe
Confidence 99776 577774433 4666554211100111100000112223344555555 67889999
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
-||..|+-.+.+ ..+.++|..+.+-
T Consensus 287 ~DgtlLlSGd~d-----------g~VcvWdi~S~Q~ 311 (476)
T KOG0646|consen 287 TDGTLLLSGDED-----------GKVCVWDIYSKQC 311 (476)
T ss_pred cCccEEEeeCCC-----------CCEEEEecchHHH
Confidence 999977644433 2478888877554
No 430
>PRK02888 nitrous-oxide reductase; Validated
Probab=94.02 E-value=6.5 Score=43.20 Aligned_cols=111 Identities=16% Similarity=0.056 Sum_probs=63.6
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
......++|||++++.++.+.. ....|..++...... ++ .+.. ..-..+.
T Consensus 236 npd~v~~spdGk~afvTsyNsE-------~G~tl~em~a~e~d~---------~v-vfni-------------~~iea~v 285 (635)
T PRK02888 236 NLDNVDTDYDGKYAFSTCYNSE-------EGVTLAEMMAAERDW---------VV-VFNI-------------ARIEEAV 285 (635)
T ss_pred CcccceECCCCCEEEEeccCcc-------cCcceeeeccccCce---------EE-EEch-------------HHHHHhh
Confidence 5567899999999887775432 123455565432110 00 0000 0011356
Q ss_pred cCCCEEEEEeeeCCeeEEEEEECCC----C-cEEE-ecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNVSS----G-ELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~~t----g-~~~~-l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
+||++.++. ..++-.+|..+ + +... |.-+... ....+||||.++++.. ...+.+-++|+.+
T Consensus 286 kdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPVGKsP-HGV~vSPDGkylyVan---klS~tVSVIDv~k 352 (635)
T PRK02888 286 KAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPVPKNP-HGVNTSPDGKYFIANG---KLSPTVTVIDVRK 352 (635)
T ss_pred hCCCEEEEC-----CCEEEEEECCccccCCcceEEEEECCCCc-cceEECCCCCEEEEeC---CCCCcEEEEEChh
Confidence 789877652 35778889887 2 3433 4444433 3467899999887655 3334477778654
No 431
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.95 E-value=0.13 Score=46.19 Aligned_cols=39 Identities=23% Similarity=0.152 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 583 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 583 (715)
.+...++..... ....+|.++|||+||.+|..++.....
T Consensus 13 ~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 13 LVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 344444444333 246799999999999999998876543
No 432
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=93.94 E-value=0.3 Score=52.45 Aligned_cols=120 Identities=17% Similarity=0.127 Sum_probs=71.8
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC-CCceecCCCCccc
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSA 263 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~ 263 (715)
.+..+..||+|+- |+.+...... ....|++++. .. .+...|..+.-.+
T Consensus 527 Ev~~l~~s~~gnl----iASaCKS~~~----------ehAvI~lw~t-----------------~~W~~~~~L~~HsLTV 575 (764)
T KOG1063|consen 527 EVYALAISPTGNL----IASACKSSLK----------EHAVIRLWNT-----------------ANWLQVQELEGHSLTV 575 (764)
T ss_pred eEEEEEecCCCCE----EeehhhhCCc----------cceEEEEEec-----------------cchhhhheecccceEE
Confidence 4567888999986 6654422211 2235777764 22 2334567777789
Q ss_pred cceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC--CCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 264 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN--FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 264 ~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~--~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
....|||||++|+-++.++. ..||.. +.+.. .+... -..+..-+-...|+
T Consensus 576 T~l~FSpdg~~LLsvsRDRt---------~sl~~~--~~~~~~e~~fa~-----------------~k~HtRIIWdcsW~ 627 (764)
T KOG1063|consen 576 TRLAFSPDGRYLLSVSRDRT---------VSLYEV--QEDIKDEFRFAC-----------------LKAHTRIIWDCSWS 627 (764)
T ss_pred EEEEECCCCcEEEEeecCce---------EEeeee--ecccchhhhhcc-----------------ccccceEEEEcccC
Confidence 99999999999998887753 345543 22111 11000 00111223466899
Q ss_pred cCCCEEEEEeeeCCeeEEEEEEC
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
||+++ +++.+++....+|...-
T Consensus 628 pde~~-FaTaSRDK~VkVW~~~~ 649 (764)
T KOG1063|consen 628 PDEKY-FATASRDKKVKVWEEPD 649 (764)
T ss_pred cccce-eEEecCCceEEEEeccC
Confidence 99986 67777777777887753
No 433
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=93.93 E-value=3 Score=44.57 Aligned_cols=140 Identities=13% Similarity=0.150 Sum_probs=78.0
Q ss_pred cccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCC----CCCCeEEEEe--cCCccEEE--
Q 005093 11 ANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE----NESPIQFELW--SQSQLEKE-- 82 (715)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~----~~~~~~~~~~--~~~~~~~~-- 82 (715)
.+..+++|-++.+++.+. ..|.+.. +. .......||-...+..++.+.. ++..--+.++ ..++.+++
T Consensus 179 ~e~draNl~L~~~~~~kl--EvL~yir-TE--~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsv 253 (545)
T PF11768_consen 179 SEKDRANLHLLSCSGGKL--EVLSYIR-TE--NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSV 253 (545)
T ss_pred ccchhccEEEEEecCCcE--EEEEEEE-ec--CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEE
Confidence 444566777765655532 2332221 11 3345667776555555554321 1222222223 23333332
Q ss_pred Eec--CccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCcc
Q 005093 83 FHV--PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKR 160 (715)
Q Consensus 83 ~~~--~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 160 (715)
+.. +..+ ...++||++++++..+.+
T Consensus 254 tsipL~s~v----------~~ca~sp~E~kLvlGC~D------------------------------------------- 280 (545)
T PF11768_consen 254 TSIPLPSQV----------ICCARSPSEDKLVLGCED------------------------------------------- 280 (545)
T ss_pred EEEecCCcc----------eEEecCcccceEEEEecC-------------------------------------------
Confidence 222 2222 688999999999997664
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
..|.++|...+..+.. ........++|+|||. ++.+++ .+++|..+|.
T Consensus 281 -gSiiLyD~~~~~t~~~---ka~~~P~~iaWHp~ga-----i~~V~s--------------~qGelQ~FD~ 328 (545)
T PF11768_consen 281 -GSIILYDTTRGVTLLA---KAEFIPTLIAWHPDGA-----IFVVGS--------------EQGELQCFDM 328 (545)
T ss_pred -CeEEEEEcCCCeeeee---eecccceEEEEcCCCc-----EEEEEc--------------CCceEEEEEe
Confidence 5588899866644333 3446677899999998 444442 3346777776
No 434
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.73 E-value=0.081 Score=49.29 Aligned_cols=71 Identities=17% Similarity=0.122 Sum_probs=46.4
Q ss_pred CcEEEEEcCCCCCCCchh-hhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC
Q 005093 510 GYSLLIVNYRGSLGFGEE-ALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA 581 (715)
Q Consensus 510 G~~vi~~d~rG~~~~g~~-~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 581 (715)
-..|++|-||-..-.... ...............|+.+|.++.+++. -+..+++|+|||.|+.+...++...
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-NNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-CCCCCEEEEEeChHHHHHHHHHHHH
Confidence 357889999864322111 0000111122334789999999888774 2457899999999999999998653
No 435
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=93.65 E-value=0.91 Score=48.10 Aligned_cols=85 Identities=15% Similarity=0.192 Sum_probs=53.1
Q ss_pred ceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|.++|+...++. .+ .++...+..++.+|.|.. |+..+. ...+..+|++
T Consensus 587 ~~vRiYdL~kqelvKkL--~tg~kwiS~msihp~GDn----li~gs~---------------d~k~~WfDld-------- 637 (733)
T KOG0650|consen 587 RSVRIYDLSKQELVKKL--LTGSKWISSMSIHPNGDN----LILGSY---------------DKKMCWFDLD-------- 637 (733)
T ss_pred cceEEEehhHHHHHHHH--hcCCeeeeeeeecCCCCe----EEEecC---------------CCeeEEEEcc--------
Confidence 66889999776543 34 455567888999999998 877652 2356677763
Q ss_pred hhhhccCCCCCCceecCCCCccccceeE----------cCCCCeEEEEecCC
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRF----------SPDGKFLVFLSAKS 282 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~----------spdg~~l~~~~~~~ 282 (715)
..+...++|-.+....++++| |+||..++|..+-.
T Consensus 638 -------lsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY 682 (733)
T KOG0650|consen 638 -------LSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVY 682 (733)
T ss_pred -------cCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeee
Confidence 144455555444333333333 67777777766553
No 436
>PRK13614 lipoprotein LpqB; Provisional
Probab=93.51 E-value=4.4 Score=44.60 Aligned_cols=56 Identities=9% Similarity=0.116 Sum_probs=38.4
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
.+..++.|+||+.+|++.. +...++..+.++..+.+..- ... ..++|.++| ++.-+
T Consensus 344 ~~~s~avS~~g~~~A~~~~---~~~~l~~~~~g~~~~~~~~g-~~L----------t~PS~d~~g-~vWtv 399 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNG---SRTTLYTVSPGQPARALTSG-STL----------TRPSFSPQD-WVWTA 399 (573)
T ss_pred cccceeecCCCceEEEecC---CCcEEEEecCCCcceeeecC-CCc----------cCCcccCCC-CEEEe
Confidence 4678899999999999843 23466666666555554442 223 789999999 66544
No 437
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=93.46 E-value=2.8 Score=41.04 Aligned_cols=135 Identities=18% Similarity=0.237 Sum_probs=80.5
Q ss_pred ccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCc--eEEEEecCCCCCCeEEEEecCCccEE
Q 005093 4 ISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGS--KLLVVRNPENESPIQFELWSQSQLEK 81 (715)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~--~la~~~~~~~~~~~~~~~~~~~~~~~ 81 (715)
|+.|-+-....+-.|.++|+..... + ..+..+.+.+.+..|+|+-+ +|.-.++++ ...+|+.|.-.-
T Consensus 51 Vs~~~~aSGssDetI~IYDm~k~~q----l--g~ll~HagsitaL~F~~~~S~shLlS~sdDG-----~i~iw~~~~W~~ 119 (362)
T KOG0294|consen 51 VSGPYVASGSSDETIHIYDMRKRKQ----L--GILLSHAGSITALKFYPPLSKSHLLSGSDDG-----HIIIWRVGSWEL 119 (362)
T ss_pred ecceeEeccCCCCcEEEEeccchhh----h--cceeccccceEEEEecCCcchhheeeecCCC-----cEEEEEcCCeEE
Confidence 4444444555666777777765543 1 22334458899999999886 666554443 456775555433
Q ss_pred EEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccC
Q 005093 82 EFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQ 161 (715)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 161 (715)
+-.+ ....+.| +.++..|.|+ ||..... .
T Consensus 120 ~~sl-K~H~~~V------t~lsiHPS~K-LALsVg~-------------------------------------------D 148 (362)
T KOG0294|consen 120 LKSL-KAHKGQV------TDLSIHPSGK-LALSVGG-------------------------------------------D 148 (362)
T ss_pred eeee-ccccccc------ceeEecCCCc-eEEEEcC-------------------------------------------C
Confidence 2222 1111223 8999999886 6664321 2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEe
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
..|.+|||-.|+.-.+ ..-......+.|+|.|.+ ++...
T Consensus 149 ~~lr~WNLV~Gr~a~v--~~L~~~at~v~w~~~Gd~----F~v~~ 187 (362)
T KOG0294|consen 149 QVLRTWNLVRGRVAFV--LNLKNKATLVSWSPQGDH----FVVSG 187 (362)
T ss_pred ceeeeehhhcCcccee--eccCCcceeeEEcCCCCE----EEEEe
Confidence 5688888877765443 122223345899999998 66654
No 438
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=93.41 E-value=12 Score=39.60 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=33.5
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 343 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 343 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
++..||+... ...|+.+|..+|+...-...........-...++.|++...+ ..|+.++..+++
T Consensus 293 ~~~~vy~~~~---~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~----G~l~~ld~~tG~ 356 (394)
T PRK11138 293 DGGRIYLVDQ---NDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSE----GYLHWINREDGR 356 (394)
T ss_pred ECCEEEEEcC---CCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCC----CEEEEEECCCCC
Confidence 4456776553 347999999999765432211100111111235566554322 357777766553
No 439
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=93.39 E-value=2.5 Score=49.00 Aligned_cols=64 Identities=13% Similarity=0.168 Sum_probs=50.9
Q ss_pred CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCcc
Q 005093 183 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISS 262 (715)
Q Consensus 183 ~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~ 262 (715)
+..+.++.|-.|+.. |++.. ..++|..+|. ++...+.+..-+..
T Consensus 68 d~~i~s~~fl~d~~~----i~v~~---------------~~G~iilvd~-----------------et~~~eivg~vd~G 111 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNS----ICVIT---------------ALGDIILVDP-----------------ETLELEIVGNVDNG 111 (1265)
T ss_pred CcceEEEEEecccce----EEEEe---------------cCCcEEEEcc-----------------cccceeeeeeccCc
Confidence 345667888888888 87765 3347888886 78888887777778
Q ss_pred ccceeEcCCCCeEEEEecCC
Q 005093 263 AFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~ 282 (715)
+...+||||++.+++++...
T Consensus 112 I~aaswS~Dee~l~liT~~~ 131 (1265)
T KOG1920|consen 112 ISAASWSPDEELLALITGRQ 131 (1265)
T ss_pred eEEEeecCCCcEEEEEeCCc
Confidence 99999999999999998764
No 440
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=93.29 E-value=0.52 Score=44.67 Aligned_cols=84 Identities=18% Similarity=0.197 Sum_probs=50.0
Q ss_pred ccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCCCCCceEEEEEeChhHHHHH
Q 005093 497 SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLANPSKVTVVGGSHGGFLTT 575 (715)
Q Consensus 497 ~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~d~~~i~l~G~S~GG~~a~ 575 (715)
..|......+. ..+.|+.++++|. +... ......+++.+. ++.+.+. ....++.++|||+||.++.
T Consensus 13 ~~~~~~~~~l~-~~~~v~~~~~~g~---~~~~-------~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 13 HEYARLAAALR-GRRDVSALPLPGF---GPGE-------PLPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred HHHHHHHHhcC-CCccEEEecCCCC---CCCC-------CCCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHH
Confidence 34666666664 4689999999884 2211 111123343332 2333332 2346799999999999998
Q ss_pred HHHhh---CCCceeEEEecCC
Q 005093 576 HLIGQ---APDKFVAAAARNP 593 (715)
Q Consensus 576 ~~a~~---~p~~~~~~v~~~~ 593 (715)
.++.+ .+..+.++++..+
T Consensus 80 ~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 80 AVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHhCCCCCcEEEEEcc
Confidence 87765 3445666665544
No 441
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=93.27 E-value=1.2 Score=47.76 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=47.5
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCcccc
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAF 264 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~ 264 (715)
.+.+++|.|||.. ++..+. +.++++|.. +++....|-.+...+.
T Consensus 14 ci~d~afkPDGsq----L~lAAg----------------~rlliyD~n----------------dG~llqtLKgHKDtVy 57 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQ----LILAAG----------------SRLLVYDTS----------------DGTLLQPLKGHKDTVY 57 (1081)
T ss_pred chheeEECCCCce----EEEecC----------------CEEEEEeCC----------------CcccccccccccceEE
Confidence 5778899999999 887762 379999972 6677778888888899
Q ss_pred ceeEcCCCCeEEEEe
Q 005093 265 FPRFSPDGKFLVFLS 279 (715)
Q Consensus 265 ~~~~spdg~~l~~~~ 279 (715)
-++||.||+.++-.+
T Consensus 58 cVAys~dGkrFASG~ 72 (1081)
T KOG1538|consen 58 CVAYAKDGKRFASGS 72 (1081)
T ss_pred EEEEccCCceeccCC
Confidence 999999999876433
No 442
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.22 E-value=0.36 Score=54.94 Aligned_cols=142 Identities=11% Similarity=0.171 Sum_probs=84.0
Q ss_pred ceEEEEEccCCce-EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~-~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
....+||+...+. ..+..+........++|.||+.. -+.++..++ +..-|-..|+-
T Consensus 184 g~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aT----ql~~As~dd-----------~~PviqlWDlR-------- 240 (1049)
T KOG0307|consen 184 GRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHAT----QLLVASGDD-----------SAPVIQLWDLR-------- 240 (1049)
T ss_pred CCceeccccCCCcccccccCCCccceeeeeeCCCCce----eeeeecCCC-----------CCceeEeeccc--------
Confidence 4578889876632 22311223344668999999988 444443222 22234444430
Q ss_pred hhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeeeeece
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVV 319 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~ 319 (715)
-.+...+.++.+...+-...|++.+..++..+.++ .+++.++..+++.. .+..
T Consensus 241 -------~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD----------~~ii~wN~~tgEvl~~~p~--------- 294 (1049)
T KOG0307|consen 241 -------FASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKD----------NRIICWNPNTGEVLGELPA--------- 294 (1049)
T ss_pred -------ccCCchhhhcccccceeeeccCCCCchhhhcccCC----------CCeeEecCCCceEeeecCC---------
Confidence 04556667777888899999999998888888775 35778887775541 1110
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
.|.| ...+.|.|..-.++..+.-.|...||.+-
T Consensus 295 --------~~nW---~fdv~w~pr~P~~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 295 --------QGNW---CFDVQWCPRNPSVMAAASFDGKISIYSLQ 327 (1049)
T ss_pred --------CCcc---eeeeeecCCCcchhhhheeccceeeeeee
Confidence 0112 23455766555455555566667777664
No 443
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.18 E-value=18 Score=40.87 Aligned_cols=98 Identities=10% Similarity=0.121 Sum_probs=55.6
Q ss_pred ccccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCcc
Q 005093 2 FSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQL 79 (715)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~ 79 (715)
|-.+||=|.-..-+..|.+++..... .+. .+..++..++...|.+.=-||.-.+++ |...+| ..++-
T Consensus 59 FH~~qplFVSGGDDykIkVWnYk~rr-----clf-tL~GHlDYVRt~~FHheyPWIlSASDD-----QTIrIWNwqsr~~ 127 (1202)
T KOG0292|consen 59 FHPTQPLFVSGGDDYKIKVWNYKTRR-----CLF-TLLGHLDYVRTVFFHHEYPWILSASDD-----QTIRIWNWQSRKC 127 (1202)
T ss_pred ecCCCCeEEecCCccEEEEEecccce-----ehh-hhccccceeEEeeccCCCceEEEccCC-----CeEEEEeccCCce
Confidence 44455555544444444444343332 222 355677888999999988888765443 566677 33333
Q ss_pred EEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 80 EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
..+.. +..| .+...+|.|....|+-.+-+.+
T Consensus 128 iavlt--GHnH-------YVMcAqFhptEDlIVSaSLDQT 158 (1202)
T KOG0292|consen 128 IAVLT--GHNH-------YVMCAQFHPTEDLIVSASLDQT 158 (1202)
T ss_pred EEEEe--cCce-------EEEeeccCCccceEEEecccce
Confidence 33221 1111 2278999998887776654443
No 444
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=93.10 E-value=13 Score=39.07 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=35.5
Q ss_pred CCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 344 GCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 344 g~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
+..+|+... . ..|+.+|+++|+...-..... ......+++.+++.. .-..++.++..+++
T Consensus 241 ~~~vy~~~~-~--g~l~a~d~~tG~~~W~~~~~~---~~~p~~~~~~vyv~~----~~G~l~~~d~~tG~ 300 (377)
T TIGR03300 241 GGQVYAVSY-Q--GRVAALDLRSGRVLWKRDASS---YQGPAVDDNRLYVTD----ADGVVVALDRRSGS 300 (377)
T ss_pred CCEEEEEEc-C--CEEEEEECCCCcEEEeeccCC---ccCceEeCCEEEEEC----CCCeEEEEECCCCc
Confidence 345666543 2 379999999998765443221 123344567777654 22468888876553
No 445
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=92.89 E-value=2 Score=41.77 Aligned_cols=119 Identities=12% Similarity=0.190 Sum_probs=71.3
Q ss_pred CCCCCccceEEEecCCCCCccEEEE-EeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc--eec
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVF-VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNL 256 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~-~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l 256 (715)
.+.+..+..++|||.... ++- .+|.. ..++|-+. ++|.. +..
T Consensus 24 ~pP~DsIS~l~FSP~~~~----~~~A~SWD~-------------tVR~wevq------------------~~g~~~~ka~ 68 (347)
T KOG0647|consen 24 NPPEDSISALAFSPQADN----LLAAGSWDG-------------TVRIWEVQ------------------NSGQLVPKAQ 68 (347)
T ss_pred CCcccchheeEeccccCc----eEEecccCC-------------ceEEEEEe------------------cCCcccchhh
Confidence 345557889999995554 443 33321 12566655 32322 344
Q ss_pred CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCC
Q 005093 257 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 336 (715)
Q Consensus 257 t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~ 336 (715)
.+..+.+-...||.||.+++-.+.+ .++-++||.+++..++.. +...+.
T Consensus 69 ~~~~~PvL~v~WsddgskVf~g~~D-----------k~~k~wDL~S~Q~~~v~~--------------------Hd~pvk 117 (347)
T KOG0647|consen 69 QSHDGPVLDVCWSDDGSKVFSGGCD-----------KQAKLWDLASGQVSQVAA--------------------HDAPVK 117 (347)
T ss_pred hccCCCeEEEEEccCCceEEeeccC-----------CceEEEEccCCCeeeeee--------------------ccccee
Confidence 4566778889999999766444333 357888999988755532 223455
Q ss_pred CCccccCCC-EEEEEeeeCCeeEEEEEECCC
Q 005093 337 SNPWLSDGC-TMLLSSIWGSSQVIISVNVSS 366 (715)
Q Consensus 337 ~~~~~~dg~-~l~~~~~~~~~~~l~~~d~~t 366 (715)
.+.|-+... .++++.+++. .|-.+|++.
T Consensus 118 t~~wv~~~~~~cl~TGSWDK--TlKfWD~R~ 146 (347)
T KOG0647|consen 118 TCHWVPGMNYQCLVTGSWDK--TLKFWDTRS 146 (347)
T ss_pred EEEEecCCCcceeEeccccc--ceeecccCC
Confidence 666755443 4666666654 455567653
No 446
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.88 E-value=0.3 Score=47.82 Aligned_cols=107 Identities=18% Similarity=0.180 Sum_probs=45.8
Q ss_pred CCCcEEEEEcCCCCCCC-CccchHHHHHH--HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHH-HHHHHc
Q 005093 479 SCDPLIVVLHGGPHSVS-LSSYSKSLAFL--SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDM 554 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~-~~~~~~~~~~l--a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i-~~l~~~ 554 (715)
.+.| ||+.||-+.... ..........+ .--|..|.+++.-. + ...+..+. +. ..+.+..+.+ +.+.+.
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~-~-~~~D~~~s----~f-~~v~~Qv~~vc~~l~~~ 75 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGN-D-PSEDVENS----FF-GNVNDQVEQVCEQLAND 75 (279)
T ss_dssp SS---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSS-S-HHHHHHHH----HH-SHHHHHHHHHHHHHHH-
T ss_pred CCCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECC-C-cchhhhhh----HH-HHHHHHHHHHHHHHhhC
Confidence 4455 677999543321 11233222222 23577788877532 1 00010000 00 1133333333 333333
Q ss_pred CCCCCceEEEEEeChhHHHHHHHHhhCCC-ceeEEEecCCc
Q 005093 555 GLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPL 594 (715)
Q Consensus 555 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~ 594 (715)
+... +-+.++|+|.||.+.-.++.+.++ .++-.|.+++.
T Consensus 76 p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 76 PELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 3222 469999999999999999888764 57777776653
No 447
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.84 E-value=2.6 Score=39.95 Aligned_cols=173 Identities=13% Similarity=0.168 Sum_probs=98.1
Q ss_pred cCceEEEEEcc-CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 160 RQPSLFVININ-SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 160 ~~~~l~~~~~~-~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
+...|++.+++ .+..+.+-...-.....+++||+.-.. +++++..+ +.|-++|+.
T Consensus 36 G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~----~~~~a~GD--------------GSLrl~d~~------ 91 (311)
T KOG0277|consen 36 GNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHEN----QVIAASGD--------------GSLRLFDLT------ 91 (311)
T ss_pred cCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcc----eEEEEecC--------------ceEEEeccC------
Confidence 45789999996 333333311123345778999998888 88877433 345555542
Q ss_pred hhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 239 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
...+.+..+.++...+.+..|++-.++.+.++.=+ +.-.||..+.+. ..+.....
T Consensus 92 ---------~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD--------~TiKLW~~~r~~-Sv~Tf~gh------- 146 (311)
T KOG0277|consen 92 ---------MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWD--------GTIKLWDPNRPN-SVQTFNGH------- 146 (311)
T ss_pred ---------CCCcchhHHHhhhhheEEeccccccceeEEeeccC--------CceEeecCCCCc-ceEeecCC-------
Confidence 24556666677777888899998877776666221 122344333222 11111111
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
..-+....|+|.---++.+.+.++.-+||-++.. |+...|......+--..|+.-...++++.
T Consensus 147 -------------~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~-gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg 209 (311)
T KOG0277|consen 147 -------------NSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP-GKFMSIEAHNSEILCCDWSKYNHNVLATG 209 (311)
T ss_pred -------------ccEEEEEecCCCCCCeEEEccCCceEEEEEecCC-CceeEEEeccceeEeecccccCCcEEEec
Confidence 1123456688765557777777777788877765 55444544443222234455445555544
No 448
>PLN02606 palmitoyl-protein thioesterase
Probab=92.55 E-value=1.2 Score=44.13 Aligned_cols=102 Identities=20% Similarity=0.209 Sum_probs=57.3
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+.| ||++||-+............+.+.+ .|+-+.++. .|. +. ...+.....+.+..+-+.|.+.+..
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~---~~------~~s~~~~~~~Qv~~vce~l~~~~~L- 93 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGN---GV------QDSLFMPLRQQASIACEKIKQMKEL- 93 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECC---Cc------ccccccCHHHHHHHHHHHHhcchhh-
Confidence 456 6778996533334455566666642 376555554 231 11 0112111123333333344433222
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCC--ceeEEEecCC
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNP 593 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~ 593 (715)
.+-+.++|+|.||.+.-.++.+.|+ .++-.|.+++
T Consensus 94 ~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 94 SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 2358999999999999999988876 4777776554
No 449
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=92.43 E-value=7 Score=40.98 Aligned_cols=73 Identities=14% Similarity=0.169 Sum_probs=44.0
Q ss_pred ccceEEEecCCCCCccEEEEEeecCccce---eee--eeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC
Q 005093 185 SVGQVVWAPLNEGLHQYLVFVGWSSETRK---LGI--KYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 259 (715)
Q Consensus 185 ~~~~~~~spdg~~~~~~i~~~~~~~~~~~---~g~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 259 (715)
....+.|.|||+ |+++........ .+. .........|++++. .+++.+.+...
T Consensus 125 ~~~~l~~gpDG~-----LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p-----------------dg~~~e~~a~G 182 (367)
T TIGR02604 125 SLNSLAWGPDGW-----LYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP-----------------DGGKLRVVAHG 182 (367)
T ss_pred cccCceECCCCC-----EEEecccCCCceeccCCCccCcccccCceEEEEec-----------------CCCeEEEEecC
Confidence 355789999996 777543211000 000 000112246999996 67777777766
Q ss_pred CccccceeEcCCCCeEEEEec
Q 005093 260 ISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 260 ~~~~~~~~~spdg~~l~~~~~ 280 (715)
.......+|+|+|+ |+++.+
T Consensus 183 ~rnp~Gl~~d~~G~-l~~tdn 202 (367)
T TIGR02604 183 FQNPYGHSVDSWGD-VFFCDN 202 (367)
T ss_pred cCCCccceECCCCC-EEEEcc
Confidence 66678899999987 445544
No 450
>KOG4328 consensus WD40 protein [Function unknown]
Probab=92.42 E-value=3.4 Score=42.49 Aligned_cols=208 Identities=11% Similarity=0.129 Sum_probs=111.6
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCc-cEE-EEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ-LEK-EFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+++...+|-|--.+-..+.-...++-.+|.+...++ ... ....+.+ +.++++.|+|....-+|++.-
T Consensus 187 ~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs--------~~Vs~l~F~P~n~s~i~ssSy--- 255 (498)
T KOG4328|consen 187 RRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHS--------GPVSGLKFSPANTSQIYSSSY--- 255 (498)
T ss_pred cceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCC--------ccccceEecCCChhheeeecc---
Confidence 668888998888733333333336656666641111 111 1111111 123899999987665565331
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC-CCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~~~~~~~~~~spdg~~~~ 199 (715)
...|...|++++....+-. -........+.++.+.+.
T Consensus 256 ----------------------------------------DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~-- 293 (498)
T KOG4328|consen 256 ----------------------------------------DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRS-- 293 (498)
T ss_pred ----------------------------------------CceeeeeeecchhhHHHhhcCccceeeeeccccCCCcc--
Confidence 2558888888776544320 124456777888888887
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~ 279 (715)
++|..+.. ...++.... .+.+...+.-++..+.+..+.|--.+++-++
T Consensus 294 --vl~~~~~G-------------~f~~iD~R~-----------------~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~ 341 (498)
T KOG4328|consen 294 --VLFGDNVG-------------NFNVIDLRT-----------------DGSEYENLRLHKKKITSVALNPVCPWFLATA 341 (498)
T ss_pred --EEEeeccc-------------ceEEEEeec-----------------CCccchhhhhhhcccceeecCCCCchheeec
Confidence 88876311 113444432 3344555555555788889999877765555
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
..+. .+.++|+..-..+.- +++.... +..++....|||+|-.| +++..+...+|
T Consensus 342 s~D~----------T~kIWD~R~l~~K~s--------p~lst~~-------HrrsV~sAyFSPs~gtl-~TT~~D~~IRv 395 (498)
T KOG4328|consen 342 SLDQ----------TAKIWDLRQLRGKAS--------PFLSTLP-------HRRSVNSAYFSPSGGTL-LTTCQDNEIRV 395 (498)
T ss_pred ccCc----------ceeeeehhhhcCCCC--------cceeccc-------ccceeeeeEEcCCCCce-EeeccCCceEE
Confidence 4331 234455433111110 0110000 22356677799988874 55554554555
Q ss_pred EE
Q 005093 360 IS 361 (715)
Q Consensus 360 ~~ 361 (715)
|-
T Consensus 396 ~d 397 (498)
T KOG4328|consen 396 FD 397 (498)
T ss_pred ee
Confidence 53
No 451
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=92.41 E-value=5.5 Score=40.00 Aligned_cols=58 Identities=9% Similarity=0.007 Sum_probs=31.0
Q ss_pred CCccccCCCEEEEEeeeCCeeEEEEEECCC----CcEEEecCCCC-CceeEEEeecC---CEEEEEEeC
Q 005093 337 SNPWLSDGCTMLLSSIWGSSQVIISVNVSS----GELLRITPAES-NFSWSLLTLDG---DNIIAVSSS 397 (715)
Q Consensus 337 ~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t----g~~~~l~~~~~-~~~~~~~s~~~---~~l~~~~~~ 397 (715)
.....++|. |||+-.. ...|++++..+ .....+..... ......++.+. +.|+++++.
T Consensus 190 g~~~D~~G~-ly~~~~~--~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~snr 255 (287)
T PF03022_consen 190 GMAIDPNGN-LYFTDVE--QNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSNR 255 (287)
T ss_dssp EEEEETTTE-EEEEECC--CTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-S
T ss_pred eEEECCCCc-EEEecCC--CCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEECc
Confidence 345566664 7665543 35899999875 35555655444 22333455544 566666543
No 452
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=92.34 E-value=1.3 Score=48.11 Aligned_cols=145 Identities=15% Similarity=0.148 Sum_probs=81.8
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
....+-+|=...+||-. ...+.++. +.-....++..... .++.++||++|++++-.--
T Consensus 40 ~~gLa~~p~Sgl~aYpA-----GCvVVlfn~~~~tQ~hlvnssRk---------~~t~vAfS~~GryvatGEc------- 98 (1080)
T KOG1408|consen 40 ANGLASVPCSGLCAYPA-----GCVVVLFNVDSCTQSHLVNSSRK---------PLTCVAFSQNGRYVATGEC------- 98 (1080)
T ss_pred CCcccccccccceeecc-----CcEEEEEcccccchhheecccCc---------ceeEEEEcCCCcEEEeccc-------
Confidence 34556677777788762 22333333 22222233332211 2379999999998776210
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCccEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
| ..+.+.||+++...+. .+ .+..+.+...+|||.++. |
T Consensus 99 -----------------------------G------~~pa~kVw~la~h~vVAEf--vdHKY~vtcvaFsp~~ky----v 137 (1080)
T KOG1408|consen 99 -----------------------------G------RTPASKVWSLAFHGVVAEF--VDHKYNVTCVAFSPGNKY----V 137 (1080)
T ss_pred -----------------------------C------CCccceeeeeccccchhhh--hhccccceeeeecCCCcE----E
Confidence 1 2367889999765432 23 455667888999999998 8
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
+-++...+.- -+..-|++++ .+...++. ..+...+||.||.+.+-..++
T Consensus 138 vSVGsQHDMI---------Vnv~dWr~N~------------------~~asnkis---s~Vsav~fsEdgSYfvT~gnr 186 (1080)
T KOG1408|consen 138 VSVGSQHDMI---------VNVNDWRVNS------------------SGASNKIS---SVVSAVAFSEDGSYFVTSGNR 186 (1080)
T ss_pred EeeccccceE---------EEhhhhhhcc------------------cccccccc---eeEEEEEEccCCceeeeeeee
Confidence 8766322210 0001223332 12222222 246778999999988766554
No 453
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=92.33 E-value=9.6 Score=39.24 Aligned_cols=145 Identities=11% Similarity=0.095 Sum_probs=83.2
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
...|.+||+++|+..... +..+..+..+.|.|.... ++.++.. ...+.+.|.
T Consensus 265 D~TV~lWD~~~g~p~~s~-~~~~k~Vq~l~wh~~~p~----~LLsGs~--------------D~~V~l~D~--------- 316 (463)
T KOG0270|consen 265 DKTVKLWDVDTGKPKSSI-THHGKKVQTLEWHPYEPS----VLLSGSY--------------DGTVALKDC--------- 316 (463)
T ss_pred CceEEEEEcCCCCcceeh-hhcCCceeEEEecCCCce----EEEeccc--------------cceEEeeec---------
Confidence 378999999999987763 224456888999998887 6666532 224556664
Q ss_pred hhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
+.......--.-.+.+..+.|.|-....+|.+.++ | .||-+|+...+. . +|.
T Consensus 317 -------R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tdd----G------~v~~~D~R~~~~-~----------vwt 368 (463)
T KOG0270|consen 317 -------RDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDD----G------TVYYFDIRNPGK-P----------VWT 368 (463)
T ss_pred -------cCccccCceEEeccceEEEEecCCCceeEEEecCC----c------eEEeeecCCCCC-c----------eeE
Confidence 11111111111233567788888777777777554 2 477777655331 0 110
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
.. .+...+..++..+.-..++.+........||.++....+
T Consensus 369 ~~-------AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~ 409 (463)
T KOG0270|consen 369 LK-------AHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPK 409 (463)
T ss_pred EE-------eccCCcceEEecCCCCcceeeccccceEEEEeecCCCCc
Confidence 00 122245555555544446666555566678887765543
No 454
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=92.32 E-value=17 Score=38.29 Aligned_cols=64 Identities=11% Similarity=0.101 Sum_probs=33.6
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 343 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 343 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
++..+|+... ...|+.+|..+|+...-...............++.+++...+ ..|+.++..+++
T Consensus 278 ~~~~vyv~~~---~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~----G~l~~~d~~tG~ 341 (377)
T TIGR03300 278 DDNRLYVTDA---DGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFE----GYLHWLSREDGS 341 (377)
T ss_pred eCCEEEEECC---CCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCC----CEEEEEECCCCC
Confidence 4455766542 357999999999765432111100111122345666654322 357777765553
No 455
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=92.27 E-value=2.2 Score=46.29 Aligned_cols=64 Identities=22% Similarity=0.245 Sum_probs=35.3
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe---cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+.+.+....|..+.++|.-. +.+.+..+| .+.=-+..+.... . ..+.+++|..||++|..+-++
T Consensus 70 H~~sV~vvTWNe~~QKLTtS-----Dt~GlIiVWmlykgsW~EEMiNnRn-K-------SvV~SmsWn~dG~kIcIvYeD 136 (1189)
T KOG2041|consen 70 HNASVMVVTWNENNQKLTTS-----DTSGLIIVWMLYKGSWCEEMINNRN-K-------SVVVSMSWNLDGTKICIVYED 136 (1189)
T ss_pred CcceEEEEEecccccccccc-----CCCceEEEEeeecccHHHHHhhCcC-c-------cEEEEEEEcCCCcEEEEEEcc
Confidence 44557777777777776522 223455555 3321111111100 0 012589999999999997654
No 456
>PLN02633 palmitoyl protein thioesterase family protein
Probab=91.84 E-value=1.7 Score=43.21 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=58.4
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
.+.| +|+.||-+............+.+.+ -|.-+.++..-. + . ...+.....+.+..+-+.|.+....
T Consensus 24 ~~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~-~-~--------~~s~~~~~~~Qve~vce~l~~~~~l 92 (314)
T PLN02633 24 VSVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGN-G-V--------GDSWLMPLTQQAEIACEKVKQMKEL 92 (314)
T ss_pred CCCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECC-C-c--------cccceeCHHHHHHHHHHHHhhchhh
Confidence 3456 6778995544433455555555544 356666654322 1 1 1112222223333333344433222
Q ss_pred CCceEEEEEeChhHHHHHHHHhhCCC--ceeEEEecCCc
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPL 594 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~ 594 (715)
.+-+.++|+|.||.++-.++.+.|+ .++..|.+++.
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 2358999999999999999988876 47777766653
No 457
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.76 E-value=0.31 Score=47.28 Aligned_cols=52 Identities=23% Similarity=0.253 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-----CCceeEEEecCCcc
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLC 595 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~ 595 (715)
.++...+..+.++. ...+|.+.|||+||.+|..++... +..+.+....+|.+
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 34444444444442 357899999999999999877642 23456666666543
No 458
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=91.74 E-value=0.98 Score=47.62 Aligned_cols=110 Identities=19% Similarity=0.194 Sum_probs=59.3
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHH-----------------HHHHHhCCcEEEEEcCCCCCCCchh
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS-----------------LAFLSSVGYSLLIVNYRGSLGFGEE 527 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~-----------------~~~la~~G~~vi~~d~rG~~~~g~~ 527 (715)
+..|.+.+. ....++|+|+++.|||+.......... ..-+... -.++.+|.+-..||..+
T Consensus 87 ~ffy~fe~~--ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a 163 (498)
T COG2939 87 FFFYTFESP--NDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRA 163 (498)
T ss_pred EEEEEecCC--CCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccc
Confidence 444555543 256789999999999976432111100 0001111 24677786655556554
Q ss_pred hhhcCCCCCCccchhhHHHHHHHHHH----cCCCCCceEEEEEeChhHHHHHHHHh
Q 005093 528 ALQSLPGKVGSQDVNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIG 579 (715)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~~~i~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~ 579 (715)
.......+. ...-+|+..+.+.+.+ .. -...+.+|+|.|+||+-+..+|.
T Consensus 164 ~~~e~~~d~-~~~~~D~~~~~~~f~~~fp~~~-r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 164 LGDEKKKDF-EGAGKDVYSFLRLFFDKFPHYA-RLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred cccccccch-hccchhHHHHHHHHHHHHHHHh-hhcCceeEeeccccchhhHHHHH
Confidence 211111111 1123455555544433 22 12358899999999998877764
No 459
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=91.70 E-value=0.32 Score=52.32 Aligned_cols=75 Identities=21% Similarity=0.260 Sum_probs=45.7
Q ss_pred cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCC-CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHH
Q 005093 498 SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG-KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTH 576 (715)
Q Consensus 498 ~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~-~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 576 (715)
.|..+++.|++.||. --++++. .-+|+.+... .....-+..+...|+.+.+.. ...||+|+||||||.+++.
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gA---PYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMA---AYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeec---ccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHH
Confidence 457889999999997 4555552 2233222110 000111345556666555431 2579999999999999998
Q ss_pred HHh
Q 005093 577 LIG 579 (715)
Q Consensus 577 ~a~ 579 (715)
++.
T Consensus 230 FL~ 232 (642)
T PLN02517 230 FMK 232 (642)
T ss_pred HHH
Confidence 765
No 460
>PRK13614 lipoprotein LpqB; Provisional
Probab=91.59 E-value=25 Score=38.87 Aligned_cols=89 Identities=15% Similarity=0.157 Sum_probs=51.5
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEe--eecC-CCCCCCcccceeeeeeceecCCCCCccccccCCCCCC
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR--IDWP-TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 338 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~--~~~~-~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 338 (715)
.+..++.|+||-+++...... +..+|++ +--. .+..+.|+... .+.. ......+
T Consensus 435 ~I~~lrvSrDG~R~Avi~~~~--------g~~~V~va~V~R~~~G~P~~L~~~~----~~~~-----------~~~~~sl 491 (573)
T PRK13614 435 TVKELRVSREGVRALVISEQN--------GKSRVQVAGIVRNEDGTPRELTAPI----TLAA-----------DSDADTG 491 (573)
T ss_pred eeEEEEECCCccEEEEEEEeC--------CccEEEEEEEEeCCCCCeEEccCce----eccc-----------CCCccee
Confidence 388899999999999987653 1234665 3322 33334453221 1100 0134577
Q ss_pred ccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 339 PWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 339 ~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
.|..++..++......++...+.+.+..|..+.+.
T Consensus 492 ~W~~~~sl~V~~~~~~~~~~~~~v~v~~g~~~~l~ 526 (573)
T PRK13614 492 AWVGDSTVVVTKASATSNVVPELLSVDAGQPQQLA 526 (573)
T ss_pred EEcCCCEEEEEeccCCCcceEEEEEeCCCCcccCC
Confidence 89988875455444455566777777566655444
No 461
>PLN02454 triacylglycerol lipase
Probab=91.47 E-value=0.55 Score=48.71 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=37.2
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC--------CCceeEEEecCCcc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLC 595 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~~ 595 (715)
.+++...|+.+++...-..-+|.++|||+||.+|..+|... ...+.+....+|-+
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 56777888888776422223599999999999999887531 11345666666654
No 462
>PRK13615 lipoprotein LpqB; Provisional
Probab=91.45 E-value=11 Score=41.32 Aligned_cols=160 Identities=9% Similarity=-0.025 Sum_probs=87.9
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEecCC-ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELWSQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
..++.|+||+.+|++... ..+.+...+ ....+.. .... ..++|.++| ++.-+....
T Consensus 337 ~s~avS~dg~~~A~v~~~-----~~l~vg~~~~~~~~~~~-~~~L----------t~PS~d~~g-~vWtv~~g~------ 393 (557)
T PRK13615 337 DAATLSADGRQAAVRNAS-----GVWSVGDGDRDAVLLDT-RPGL----------VAPSLDAQG-YVWSTPASD------ 393 (557)
T ss_pred ccceEcCCCceEEEEcCC-----ceEEEecCCCcceeecc-CCcc----------ccCcCcCCC-CEEEEeCCC------
Confidence 678999999999999432 245555443 4444332 2223 789999999 666442211
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecCCCCCccEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
...+.... .+|+...+. .......+..++.|+||-+ ++
T Consensus 394 ------------------------------------~~~l~~~~-~~G~~~~v~v~~~~~~~I~~lrvSrDG~R----~A 432 (557)
T PRK13615 394 ------------------------------------PRGLVAWG-PDGVGHPVAVSWTATGRVVSLEVARDGAR----VL 432 (557)
T ss_pred ------------------------------------ceEEEEec-CCCceEEeeccccCCCeeEEEEeCCCccE----EE
Confidence 01122211 233333331 1112235778999999999 98
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec-CC------CCccccceeEcCCCCeEE
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TE------SISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-t~------~~~~~~~~~~spdg~~l~ 276 (715)
......+. .+|++.-+. ..++..+.| +. .-....+..|..+++ |+
T Consensus 433 vi~~~~g~------------~~V~va~V~---------------R~~~~P~~L~~~p~~l~~~l~~v~sl~W~~~~~-la 484 (557)
T PRK13615 433 VQLETGAG------------PQLLVASIV---------------RDGGVPTSLTTTPLELLASPGTPLDATWVDELD-VA 484 (557)
T ss_pred EEEecCCC------------CEEEEEEEE---------------eCCCcceEeeeccEEcccCcCcceeeEEcCCCE-EE
Confidence 87643221 245554331 012323344 32 233578889998887 65
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
.+.... ....+++++.+.+..
T Consensus 485 Vl~~~~-------~~~~~v~~v~v~g~~ 505 (557)
T PRK13615 485 TLTLAP-------DGERQVELHQVGGPS 505 (557)
T ss_pred EEeccC-------CCCceEEEEECCCcc
Confidence 555332 123457888877543
No 463
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=91.42 E-value=5.8 Score=40.22 Aligned_cols=38 Identities=13% Similarity=0.202 Sum_probs=23.2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEE
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFV 205 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~ 205 (715)
..+.++....+..+.+ .-.-....+++||||++. |+++
T Consensus 132 ~~~di~s~~~~~~~~~--lGhvSml~dVavS~D~~~----Iita 169 (390)
T KOG3914|consen 132 YSFDILSADSGRCEPI--LGHVSMLLDVAVSPDDQF----IITA 169 (390)
T ss_pred eeeeeecccccCcchh--hhhhhhhheeeecCCCCE----EEEe
Confidence 3455555444555444 222236779999999987 6665
No 464
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=91.12 E-value=8.7 Score=41.25 Aligned_cols=82 Identities=15% Similarity=0.090 Sum_probs=52.3
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCC
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYAD 96 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (715)
..-.+.+.....+...+|+.|+++ .+..-++||+.++|+..-.++ .+...+...+....+.....+
T Consensus 237 d~ciYE~~r~klqrvsvtsipL~s---~v~~ca~sp~E~kLvlGC~Dg----SiiLyD~~~~~t~~~ka~~~P------- 302 (545)
T PF11768_consen 237 DSCIYECSRNKLQRVSVTSIPLPS---QVICCARSPSEDKLVLGCEDG----SIILYDTTRGVTLLAKAEFIP------- 302 (545)
T ss_pred EEEEEEeecCceeEEEEEEEecCC---cceEEecCcccceEEEEecCC----eEEEEEcCCCeeeeeeecccc-------
Confidence 333444665555555566666653 578889999999999877664 333333333444455544444
Q ss_pred CcccceeecCCCCeEEEEe
Q 005093 97 GWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 97 ~~~~~~~wSpDg~~la~~~ 115 (715)
..++|+|||..++..+
T Consensus 303 ---~~iaWHp~gai~~V~s 318 (545)
T PF11768_consen 303 ---TLIAWHPDGAIFVVGS 318 (545)
T ss_pred ---eEEEEcCCCcEEEEEc
Confidence 6899999998776643
No 465
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.06 E-value=0.45 Score=51.42 Aligned_cols=65 Identities=17% Similarity=0.295 Sum_probs=52.8
Q ss_pred CCcEEEEeeCCCCcCCchHHHHHHHHHHHc-CC-------cEEEEEeCCCCccCCCC-CchHHHHHHHHHHHHH
Q 005093 648 KTPTIFLLGAQDLRVPVSNGLQYARALREK-GV-------ETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKK 712 (715)
Q Consensus 648 ~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~-g~-------~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~wl~~ 712 (715)
-..+|+.||..|..+|+..+..+|+++.+. +. -.++..+||.+|....+ ....+.+..+.+|.++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 368999999999999999999999998765 21 36899999999976543 2334788999999975
No 466
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=90.64 E-value=24 Score=36.85 Aligned_cols=35 Identities=9% Similarity=0.146 Sum_probs=23.6
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
..+.+|++.++...... ......+..+.|+|+++.
T Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~ 212 (466)
T COG2319 178 GTIKLWDLRTGKPLSTL-AGHTDPVSSLAFSPDGGL 212 (466)
T ss_pred CceEEEEcCCCceEEee-ccCCCceEEEEEcCCcce
Confidence 66888888775544431 223456778899999985
No 467
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=90.52 E-value=11 Score=41.19 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=18.6
Q ss_pred ccccceeEcCCCCeEEEEecCCC
Q 005093 261 SSAFFPRFSPDGKFLVFLSAKSS 283 (715)
Q Consensus 261 ~~~~~~~~spdg~~l~~~~~~~~ 283 (715)
-.+....|+|+|..|+...+..+
T Consensus 259 m~~vgakWnh~G~vLAvcG~~~d 281 (1189)
T KOG2041|consen 259 MKIVGAKWNHNGAVLAVCGNDSD 281 (1189)
T ss_pred cEeecceecCCCcEEEEccCccc
Confidence 34677899999999998887653
No 468
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=90.31 E-value=8.9 Score=41.96 Aligned_cols=111 Identities=14% Similarity=0.060 Sum_probs=72.3
Q ss_pred CCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCC-CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecC
Q 005093 145 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 222 (715)
Q Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~-~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~ 222 (715)
++...|.|+-....-...+|.+++++.|+....- +..+ +...-.+...|.|-. |+.+. .
T Consensus 601 Dm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY----~atSc---------------s 661 (1080)
T KOG1408|consen 601 DMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIY----LATSC---------------S 661 (1080)
T ss_pred EeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccE----EEEee---------------c
Confidence 4455677755544444578999999999877762 1111 122334566777765 55543 1
Q ss_pred CceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC
Q 005093 223 PCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 301 (715)
Q Consensus 223 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~ 301 (715)
+-.|..+|+ -+|+. .+.+.+...+....|++|=|.|+-++.+. -||++.++
T Consensus 662 dktl~~~Df-----------------~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDg-----------CIFvW~lp 713 (1080)
T KOG1408|consen 662 DKTLCFVDF-----------------VSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDG-----------CIFVWKLP 713 (1080)
T ss_pred CCceEEEEe-----------------ccchhhhhhcCcchheeeeeecccchhheeecCCc-----------eEEEEECc
Confidence 226888887 56665 46677666788899999999998777552 37777765
Q ss_pred C
Q 005093 302 T 302 (715)
Q Consensus 302 ~ 302 (715)
-
T Consensus 714 ~ 714 (1080)
T KOG1408|consen 714 L 714 (1080)
T ss_pred h
Confidence 5
No 469
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=90.23 E-value=6.6 Score=41.15 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=25.4
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
..++.+++++++.+.+ ..+-.....++|+|+|+
T Consensus 164 g~i~r~~pdg~~~e~~--a~G~rnp~Gl~~d~~G~ 196 (367)
T TIGR02604 164 GGLFRYNPDGGKLRVV--AHGFQNPYGHSVDSWGD 196 (367)
T ss_pred ceEEEEecCCCeEEEE--ecCcCCCccceECCCCC
Confidence 5799999999988877 34433456789999987
No 470
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.04 E-value=33 Score=38.96 Aligned_cols=205 Identities=13% Similarity=0.123 Sum_probs=120.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
.++-..+|.|.--||.-.--. .+..+| .-+.....++ .| ||++.++.|.|++-. |++..
T Consensus 10 sRvKglsFHP~rPwILtslHs-----G~IQlWDYRM~tli~rFd----eH-----dGpVRgv~FH~~qpl--FVSGG--- 70 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLHS-----GVIQLWDYRMGTLIDRFD----EH-----DGPVRGVDFHPTQPL--FVSGG--- 70 (1202)
T ss_pred ccccceecCCCCCEEEEeecC-----ceeeeehhhhhhHHhhhh----cc-----CCccceeeecCCCCe--EEecC---
Confidence 456677888998888754222 345566 3333332221 12 233489999998863 33221
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCC-CccceEEEecCCCCC
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKS-LSVGQVVWAPLNEGL 198 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~-~~~~~~~~spdg~~~ 198 (715)
....|-||+.++.+.. .| .+. ..+....|.+.=..
T Consensus 71 ---------------------------------------DDykIkVWnYk~rrclftL---~GHlDYVRt~~FHheyPW- 107 (1202)
T KOG0292|consen 71 ---------------------------------------DDYKIKVWNYKTRRCLFTL---LGHLDYVRTVFFHHEYPW- 107 (1202)
T ss_pred ---------------------------------------CccEEEEEecccceehhhh---ccccceeEEeeccCCCce-
Confidence 1366888888655422 22 122 24556667777666
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
|+..+ -++.|.+++. ++.. +..||.+.-.+--..|.|....++-
T Consensus 108 ---IlSAS---------------DDQTIrIWNw-----------------qsr~~iavltGHnHYVMcAqFhptEDlIVS 152 (1202)
T KOG0292|consen 108 ---ILSAS---------------DDQTIRIWNW-----------------QSRKCIAVLTGHNHYVMCAQFHPTEDLIVS 152 (1202)
T ss_pred ---EEEcc---------------CCCeEEEEec-----------------cCCceEEEEecCceEEEeeccCCccceEEE
Confidence 66554 2235666665 5544 4567888878888899998887877
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccc------------------eeeeeeceecCCCCCccccccCCCCCCc
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK------------------IVDVIPVVQCAEGDCFPGLYSSSILSNP 339 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 339 (715)
.|-+. .+.++|+++-..+....+ .|.++..+-.+ ++.++...+
T Consensus 153 aSLDQ-----------TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEG--------HDRGVNwaA 213 (1202)
T KOG0292|consen 153 ASLDQ-----------TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEG--------HDRGVNWAA 213 (1202)
T ss_pred ecccc-----------eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecc--------cccccceEE
Confidence 66553 367777766333332222 12233333222 334666667
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
|.|-- -++++..++....||+++-
T Consensus 214 fhpTl-pliVSG~DDRqVKlWrmne 237 (1202)
T KOG0292|consen 214 FHPTL-PLIVSGADDRQVKLWRMNE 237 (1202)
T ss_pred ecCCc-ceEEecCCcceeeEEEecc
Confidence 77654 3777777777788999985
No 471
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=89.74 E-value=20 Score=38.45 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=60.0
Q ss_pred cCceEEEEEccCCceEeecCCCCCC-ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
....++++++.+|+...-..+.... .+....|+.+-. .+|+.. ...++..+++
T Consensus 78 ~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~-----ciyS~~--------------ad~~v~~~~~------- 131 (541)
T KOG4547|consen 78 PQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLG-----CIYSVG--------------ADLKVVYILE------- 131 (541)
T ss_pred CCccEEEEEecCCeEEEEEecCCCCCcceeeecccccC-----ceEecC--------------CceeEEEEec-------
Confidence 4577999999999876542122222 233444554443 555542 2235666665
Q ss_pred hhhhhhccCCCCCCceecCCC-CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 239 SELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~-~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
..+...++-.. .....+...||||+.|+..+ .+|-++|+.+++.
T Consensus 132 ----------~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as-------------~~ik~~~~~~kev 176 (541)
T KOG4547|consen 132 ----------KEKVIIRIWKEQKPLVSSLCISPDGKILLTAS-------------RQIKVLDIETKEV 176 (541)
T ss_pred ----------ccceeeeeeccCCCccceEEEcCCCCEEEecc-------------ceEEEEEccCceE
Confidence 55555555443 33578899999999887554 3488889888765
No 472
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=89.73 E-value=5.7 Score=37.38 Aligned_cols=99 Identities=12% Similarity=0.136 Sum_probs=54.6
Q ss_pred CCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCcccccee--EeeecCCCCCCCcccceeeeeeceecCC-CC
Q 005093 249 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSL--HRIDWPTNGNFSSLEKIVDVIPVVQCAE-GD 325 (715)
Q Consensus 249 ~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l--~~~~~~~~~~~~lt~~~~~~~~~~~~~~-~~ 325 (715)
.++++..+-+.-+-.....|+.|-|+++|+...+ ..+ |-+|+++|... ..+.+..+-.... +.
T Consensus 146 ~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln----------~~V~a~dyd~~tG~~s----nr~~i~dlrk~~~~e~ 211 (310)
T KOG4499|consen 146 AGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLN----------YEVDAYDYDCPTGDLS----NRKVIFDLRKSQPFES 211 (310)
T ss_pred cCCCceeeehhccCCccccccccCcEEEEEccCc----------eEEeeeecCCCccccc----CcceeEEeccCCCcCC
Confidence 4566666555444456789999999999988653 345 66668876641 1112222211111 11
Q ss_pred CccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 005093 326 CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 371 (715)
Q Consensus 326 ~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 371 (715)
.+| ..++...+|+ |++..-.+ .+++++|+.||+...
T Consensus 212 ~~P-------DGm~ID~eG~-L~Va~~ng--~~V~~~dp~tGK~L~ 247 (310)
T KOG4499|consen 212 LEP-------DGMTIDTEGN-LYVATFNG--GTVQKVDPTTGKILL 247 (310)
T ss_pred CCC-------CcceEccCCc-EEEEEecC--cEEEEECCCCCcEEE
Confidence 111 2333444554 44443333 478899999888643
No 473
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=89.73 E-value=11 Score=37.85 Aligned_cols=165 Identities=13% Similarity=0.185 Sum_probs=87.8
Q ss_pred CceEEEEEccCCceEeecCCCCCC-ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
...+-+||+++|++..- .++.+ .+..+++|+--. .+|++.. ..+|-.+||
T Consensus 172 DrtikIwDlatg~Lklt--ltGhi~~vr~vavS~rHp-----YlFs~ge--------------dk~VKCwDL-------- 222 (460)
T KOG0285|consen 172 DRTIKIWDLATGQLKLT--LTGHIETVRGVAVSKRHP-----YLFSAGE--------------DKQVKCWDL-------- 222 (460)
T ss_pred CceeEEEEcccCeEEEe--ecchhheeeeeeecccCc-----eEEEecC--------------CCeeEEEec--------
Confidence 37799999999987653 34333 466788888665 4565532 236778887
Q ss_pred hhhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeeeee
Q 005093 240 ELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIP 317 (715)
Q Consensus 240 ~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~ 317 (715)
+..+. +.-..+-..+......|.-+.| ++..++ ..+.++|+.+.... .+...
T Consensus 223 ---------e~nkvIR~YhGHlS~V~~L~lhPTldvl-~t~grD----------st~RvWDiRtr~~V~~l~GH------ 276 (460)
T KOG0285|consen 223 ---------EYNKVIRHYHGHLSGVYCLDLHPTLDVL-VTGGRD----------STIRVWDIRTRASVHVLSGH------ 276 (460)
T ss_pred ---------hhhhhHHHhccccceeEEEeccccceeE-EecCCc----------ceEEEeeecccceEEEecCC------
Confidence 44433 3333334456667777776655 444443 23566777664331 12111
Q ss_pred ceecCCCCCccccccCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCc-EEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
...+..+.+.| |+. + ++.+.++..+| +|+..|+ ...++.... ++..++.......|.+
T Consensus 277 --------------~~~V~~V~~~~~dpq-v-it~S~D~tvrl--WDl~agkt~~tlt~hkk--svral~lhP~e~~fAS 336 (460)
T KOG0285|consen 277 --------------TNPVASVMCQPTDPQ-V-ITGSHDSTVRL--WDLRAGKTMITLTHHKK--SVRALCLHPKENLFAS 336 (460)
T ss_pred --------------CCcceeEEeecCCCc-e-EEecCCceEEE--eeeccCceeEeeecccc--eeeEEecCCchhhhhc
Confidence 11223333433 443 3 34444444445 5766555 444555554 4445554444555555
Q ss_pred eCCCC
Q 005093 396 SSPVD 400 (715)
Q Consensus 396 ~~~~~ 400 (715)
++++.
T Consensus 337 as~dn 341 (460)
T KOG0285|consen 337 ASPDN 341 (460)
T ss_pred cCCcc
Confidence 54443
No 474
>PLN02408 phospholipase A1
Probab=89.71 E-value=0.52 Score=48.21 Aligned_cols=40 Identities=23% Similarity=0.180 Sum_probs=29.0
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
.+++.+.|..+++...-...+|.+.|||+||.+|..+|..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3566677777776542223469999999999999987754
No 475
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=89.17 E-value=20 Score=39.44 Aligned_cols=63 Identities=8% Similarity=-0.006 Sum_probs=36.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCcc--EEEEecCccccccccCCCcccceeecCCCCeEEE
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 113 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~ 113 (715)
+.......|++...+|+...++ ..-++.+...+.. ..++.........| +.+.||+||+++++
T Consensus 77 ~~~~~~~vs~~e~lvAagt~~g--~V~v~ql~~~~p~~~~~~t~~d~~~~~rV------Tal~Ws~~~~k~ys 141 (726)
T KOG3621|consen 77 GITCVRSVSSVEYLVAAGTASG--RVSVFQLNKELPRDLDYVTPCDKSHKCRV------TALEWSKNGMKLYS 141 (726)
T ss_pred ceEEEEEecchhHhhhhhcCCc--eEEeehhhccCCCcceeeccccccCCceE------EEEEecccccEEee
Confidence 4466677899988888765442 2223333332222 22333333212233 89999999999977
No 476
>PRK13613 lipoprotein LpqB; Provisional
Probab=89.07 E-value=25 Score=39.34 Aligned_cols=86 Identities=19% Similarity=0.156 Sum_probs=49.3
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEe--eecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCc
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR--IDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 339 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~--~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 339 (715)
.+..++.|+||-+++...... +..+|++ +.-...+.+.|+... .+.... .....+.
T Consensus 456 ~I~~lrvSrDG~RvAvv~~~~--------g~~~v~va~V~R~~~G~~~l~~~~----~l~~~l----------~~v~~~~ 513 (599)
T PRK13613 456 RVVAVRVARDGVRVALIVEKD--------GRRSLQIGRIVRDAKAVVSVEEFR----SLAPEL----------EDVTDMS 513 (599)
T ss_pred EeEEEEECCCccEEEEEEecC--------CCcEEEEEEEEeCCCCcEEeeccE----EeccCC----------CccceeE
Confidence 588899999999999987653 1234554 333333323443211 110000 0245778
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVSSGEL 369 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~ 369 (715)
|..+++.+++.....+...+|.+++++...
T Consensus 514 W~~~~sL~Vlg~~~~~~~~v~~v~vdG~~~ 543 (599)
T PRK13613 514 WAGDSQLVVLGREEGGVQQARYVQVDGSTP 543 (599)
T ss_pred EcCCCEEEEEeccCCCCcceEEEecCCcCc
Confidence 998876444344445567789999875443
No 477
>PRK13613 lipoprotein LpqB; Provisional
Probab=88.98 E-value=25 Score=39.30 Aligned_cols=167 Identities=13% Similarity=0.056 Sum_probs=88.3
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCc----cEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
....++.|+||+.+|++... ...++.=. .++. ...++. ... +..++|.++| ++.-+ +.
T Consensus 364 ~~~s~avS~~g~~~A~v~~~---~~~l~vg~~~~~~~~~~~~~~~~~-~~~----------Lt~PS~d~~g-~vWtv-d~ 427 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISAD---GDSVYVGSLTPGASIGVHSWGVTA-DGR----------LTSPSWDGRG-DLWVV-DR 427 (599)
T ss_pred CccceEEcCCCceEEEEcCC---CcEEEEeccCCCCccccccceeec-cCc----------ccCCcCcCCC-CEEEe-cC
Confidence 46788999999999999542 22333311 1222 112222 112 3799999998 66654 11
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC-CCCccceEEEecCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNE 196 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~~~~~~~~~~spdg~ 196 (715)
... +...|.+..- +|+...+.... ....+..++.|+||-
T Consensus 428 ~~~---------------------------------------~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~lrvSrDG~ 467 (599)
T PRK13613 428 DPA---------------------------------------DPRLLWLLQG-DGEPVEVRTPELDGHRVVAVRVARDGV 467 (599)
T ss_pred CCC---------------------------------------CceEEEEEcC-CCcEEEeeccccCCCEeEEEEECCCcc
Confidence 100 0122334432 45544442111 112577899999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC------CCccccceeEcC
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE------SISSAFFPRFSP 270 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~------~~~~~~~~~~sp 270 (715)
+ +++.....+. .+|++.-+.- -..+. ..|+. .-....+..|..
T Consensus 468 R----vAvv~~~~g~------------~~v~va~V~R--------------~~~G~-~~l~~~~~l~~~l~~v~~~~W~~ 516 (599)
T PRK13613 468 R----VALIVEKDGR------------RSLQIGRIVR--------------DAKAV-VSVEEFRSLAPELEDVTDMSWAG 516 (599)
T ss_pred E----EEEEEecCCC------------cEEEEEEEEe--------------CCCCc-EEeeccEEeccCCCccceeEEcC
Confidence 9 9988643221 2344332200 02332 33333 233467899998
Q ss_pred CCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 271 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 271 dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
++. |+.+.... .....++.+++++...
T Consensus 517 ~~s-L~Vlg~~~-------~~~~~v~~v~vdG~~~ 543 (599)
T PRK13613 517 DSQ-LVVLGREE-------GGVQQARYVQVDGSTP 543 (599)
T ss_pred CCE-EEEEeccC-------CCCcceEEEecCCcCc
Confidence 887 55543221 1234588888886543
No 478
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=88.89 E-value=44 Score=38.73 Aligned_cols=66 Identities=18% Similarity=0.262 Sum_probs=36.0
Q ss_pred EeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCc--cccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 48 VVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
...|||.+.+++..+-.+.-.+.+ ... ..+..+.. ..+.....++.+..+.|||.|+.|+|+....
T Consensus 102 ~~~s~d~~~~~~~~~~~~~~rhs~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wsp~~~~l~yv~~~n 169 (755)
T KOG2100|consen 102 DLISPDRKYILLGRNYKKRFRHSY---TAK--YHLYDLNTGEKLHPPEYEGSKIQYASWSPLGNDLAYVLHNN 169 (755)
T ss_pred cccChhhhhheeccCcccccceee---EEE--EEEEEcCCCCcccCcccCCCeeEEEEEcCCCCEEEEEEecc
Confidence 477899999988766431111100 000 01111111 1133333444557899999999999987643
No 479
>PLN02571 triacylglycerol lipase
Probab=88.85 E-value=0.62 Score=48.40 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
.+++.+.|..+.+...-..-+|.+.|||+||.+|..+|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4567777777766542122379999999999999987753
No 480
>PF03283 PAE: Pectinacetylesterase
Probab=88.79 E-value=0.25 Score=51.14 Aligned_cols=38 Identities=24% Similarity=0.345 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHH
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLI 578 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a 578 (715)
..-+.+++++|.+++.-+.++|.|.|.|+||+.++..+
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 44677889999998667789999999999999888654
No 481
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=88.71 E-value=18 Score=39.23 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=24.0
Q ss_pred ceEEEEEccCCceEeec-CCCCCCccceEEEecCCCC
Q 005093 162 PSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~ 197 (715)
..+..||+++++..-.. -......+...+|.|+.+.
T Consensus 122 sT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~ 158 (720)
T KOG0321|consen 122 STIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPA 158 (720)
T ss_pred ceeeeeeeccceeecceeecccccccchhhhccCCCc
Confidence 77899999887654331 0122234667899999985
No 482
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=88.61 E-value=26 Score=34.45 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=56.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
..++..++||.++.|+..+ .+ ++-.+|.+... .....+.....+ -...|.++. .++...
T Consensus 14 d~IS~v~f~~~~~~LLvss-WD-gslrlYdv~~~-~l~~~~~~~~pl----------L~c~F~d~~-~~~~G~------- 72 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSS-WD-GSLRLYDVPAN-SLKLKFKHGAPL----------LDCAFADES-TIVTGG------- 72 (323)
T ss_pred hceeeEEEcCcCCcEEEEe-cc-CcEEEEeccch-hhhhheecCCce----------eeeeccCCc-eEEEec-------
Confidence 5689999999999988665 54 55555555432 222222222222 455666533 344421
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
-..+|.++|+++++..++ ...+..+..+.+++--.
T Consensus 73 -------------------------------------~dg~vr~~Dln~~~~~~i--gth~~~i~ci~~~~~~~ 107 (323)
T KOG1036|consen 73 -------------------------------------LDGQVRRYDLNTGNEDQI--GTHDEGIRCIEYSYEVG 107 (323)
T ss_pred -------------------------------------cCceEEEEEecCCcceee--ccCCCceEEEEeeccCC
Confidence 237799999999988888 45555555666665333
No 483
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=88.24 E-value=0.85 Score=47.57 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=47.1
Q ss_pred cchHHHHHHHhCCcE----EE--EEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhH
Q 005093 498 SYSKSLAFLSSVGYS----LL--IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGG 571 (715)
Q Consensus 498 ~~~~~~~~la~~G~~----vi--~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG 571 (715)
.|..+++.|+.-||. ++ ..|.|-+.. ..+-...-+..+...|+...+.. ..+||.|++|||||
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~---------~~e~rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~ 193 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYH---------NSEERDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGG 193 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccC---------ChhHHHHHHHHHHHHHHHHHHHc--CCCceEEEecCCcc
Confidence 567788889998887 33 345554210 00111111344555555554442 34899999999999
Q ss_pred HHHHHHHhhCCC
Q 005093 572 FLTTHLIGQAPD 583 (715)
Q Consensus 572 ~~a~~~a~~~p~ 583 (715)
.+....+..+++
T Consensus 194 l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 194 LYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHhcccc
Confidence 999999887765
No 484
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=88.22 E-value=6.2 Score=42.61 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=31.0
Q ss_pred CCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 250 DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 250 ~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
..+...|-.+...++....++||++++-++.+. .|.++|+..
T Consensus 203 ~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDg-----------tIrlWdLgq 244 (735)
T KOG0308|consen 203 CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDG-----------TIRLWDLGQ 244 (735)
T ss_pred ccceeeeeccccceEEEEEcCCCCeEeecCCCc-----------eEEeeeccc
Confidence 445667777777889999999999998777663 366777644
No 485
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=88.07 E-value=39 Score=35.79 Aligned_cols=59 Identities=14% Similarity=0.126 Sum_probs=35.0
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 345 CTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 345 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
..+|+.+. ...|+.+|+++|+...-..-.. ......+++.+++.... ..++.++..+++
T Consensus 257 ~~vy~~~~---~g~l~ald~~tG~~~W~~~~~~---~~~~~~~~~~vy~~~~~----g~l~ald~~tG~ 315 (394)
T PRK11138 257 GVVYALAY---NGNLVALDLRSGQIVWKREYGS---VNDFAVDGGRIYLVDQN----DRVYALDTRGGV 315 (394)
T ss_pred CEEEEEEc---CCeEEEEECCCCCEEEeecCCC---ccCcEEECCEEEEEcCC----CeEEEEECCCCc
Confidence 34666543 2479999999998654332211 11234466777775532 458888876553
No 486
>PLN02324 triacylglycerol lipase
Probab=88.01 E-value=0.78 Score=47.57 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=28.5
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG 579 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 579 (715)
.+.+.+.|..+++...-..-+|.+.|||+||.+|..+|.
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 456667777777764212247999999999999998875
No 487
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=87.61 E-value=0.87 Score=41.61 Aligned_cols=65 Identities=11% Similarity=-0.013 Sum_probs=48.2
Q ss_pred CcEEEEeeCCCCcCCchHHHHHHHHHHHcCC-cEEEEEeCCCCcc--CCCCCchHHHHHHHHHHHHHh
Q 005093 649 TPTIFLLGAQDLRVPVSNGLQYARALREKGV-ETKVIVFPNDVHG--IERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 649 ~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++|-+-|+.|.++.+.|+....+....... ....++.+++||. |.....+.+++-.|.+|+.++
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 6888899999999999998776554332211 2456788899996 555666777888899998764
No 488
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=87.08 E-value=15 Score=38.22 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=26.5
Q ss_pred ceEEEEEccCCceEeecCCCCCC-ccceEEEecCCCC
Q 005093 162 PSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEG 197 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~-~~~~~~~spdg~~ 197 (715)
.+||+|.+.+|++..+ ....+ .+.-..||-||..
T Consensus 103 g~lYlWelssG~LL~v--~~aHYQ~ITcL~fs~dgs~ 137 (476)
T KOG0646|consen 103 GNLYLWELSSGILLNV--LSAHYQSITCLKFSDDGSH 137 (476)
T ss_pred CcEEEEEeccccHHHH--HHhhccceeEEEEeCCCcE
Confidence 6799999999998766 33333 5778899999985
No 489
>PLN02802 triacylglycerol lipase
Probab=87.04 E-value=0.94 Score=48.06 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
.+++.+.|..+.+...-..-+|.|.|||+||.+|..+|..
T Consensus 311 reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 311 SESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3566777777776542222479999999999999987753
No 490
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=86.66 E-value=5.5 Score=39.78 Aligned_cols=41 Identities=10% Similarity=0.070 Sum_probs=32.4
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 580 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 580 (715)
.....+..+..+|.++. -..++|.++|+|.|++.|-.++..
T Consensus 72 g~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 33567778888887765 456889999999999999888754
No 491
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=86.58 E-value=22 Score=34.94 Aligned_cols=89 Identities=7% Similarity=0.029 Sum_probs=58.4
Q ss_pred ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec
Q 005093 99 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK 178 (715)
Q Consensus 99 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~ 178 (715)
++.++|||.+..|+..+-+ ..|.+++....+++..
T Consensus 16 IS~v~f~~~~~~LLvssWD--------------------------------------------gslrlYdv~~~~l~~~- 50 (323)
T KOG1036|consen 16 ISSVKFSPSSSDLLVSSWD--------------------------------------------GSLRLYDVPANSLKLK- 50 (323)
T ss_pred eeeEEEcCcCCcEEEEecc--------------------------------------------CcEEEEeccchhhhhh-
Confidence 4899999999988886422 4477777776665554
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC
Q 005093 179 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE 258 (715)
Q Consensus 179 ~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~ 258 (715)
.....++....|.++.. +++.. .+..|-++|+ ++++..++-.
T Consensus 51 -~~~~~plL~c~F~d~~~-----~~~G~---------------~dg~vr~~Dl-----------------n~~~~~~igt 92 (323)
T KOG1036|consen 51 -FKHGAPLLDCAFADEST-----IVTGG---------------LDGQVRRYDL-----------------NTGNEDQIGT 92 (323)
T ss_pred -eecCCceeeeeccCCce-----EEEec---------------cCceEEEEEe-----------------cCCcceeecc
Confidence 34444666788887544 44332 3347889998 7777777766
Q ss_pred CCccccceeEcC
Q 005093 259 SISSAFFPRFSP 270 (715)
Q Consensus 259 ~~~~~~~~~~sp 270 (715)
+...+....+++
T Consensus 93 h~~~i~ci~~~~ 104 (323)
T KOG1036|consen 93 HDEGIRCIEYSY 104 (323)
T ss_pred CCCceEEEEeec
Confidence 655555555553
No 492
>PLN00413 triacylglycerol lipase
Probab=86.40 E-value=1.2 Score=46.99 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG 579 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 579 (715)
...+...+..+.+.. ...+|.+.|||+||.+|..++.
T Consensus 267 yy~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 345666666666653 3568999999999999998774
No 493
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=86.15 E-value=4.3 Score=39.84 Aligned_cols=89 Identities=9% Similarity=0.169 Sum_probs=57.6
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccc-cc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTV-HG 91 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~ 91 (715)
...+.++|++....++.. -..++...+...+.+-+|..||-.+..+ .+..++ .+|...+... .+. +-
T Consensus 158 ~GqvQi~dL~~~~~~~p~----~I~AH~s~Iacv~Ln~~Gt~vATaStkG----TLIRIFdt~~g~~l~E~R--RG~d~A 227 (346)
T KOG2111|consen 158 TGQVQIVDLASTKPNAPS----IINAHDSDIACVALNLQGTLVATASTKG----TLIRIFDTEDGTLLQELR--RGVDRA 227 (346)
T ss_pred cceEEEEEhhhcCcCCce----EEEcccCceeEEEEcCCccEEEEeccCc----EEEEEEEcCCCcEeeeee--cCCchh
Confidence 356777777766553221 1334557789999999999999765544 666677 3444333332 221 11
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.| ..++||||+++||.+++..+
T Consensus 228 ~i------y~iaFSp~~s~LavsSdKgT 249 (346)
T KOG2111|consen 228 DI------YCIAFSPNSSWLAVSSDKGT 249 (346)
T ss_pred eE------EEEEeCCCccEEEEEcCCCe
Confidence 22 58999999999999887653
No 494
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=86.00 E-value=17 Score=36.83 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=62.7
Q ss_pred cccccceEEeeCCCCceEEEEecCCCCCCeEEEEe---cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 40 VEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 40 ~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
.+++.++...|++ ...+|....+ +....| .++....++. ... +..+..+|..+.|+..+.
T Consensus 258 GHt~~Vs~V~w~d--~~v~yS~SwD----HTIk~WDletg~~~~~~~~-~ks----------l~~i~~~~~~~Ll~~gss 320 (423)
T KOG0313|consen 258 GHTEPVSSVVWSD--ATVIYSVSWD----HTIKVWDLETGGLKSTLTT-NKS----------LNCISYSPLSKLLASGSS 320 (423)
T ss_pred ccccceeeEEEcC--CCceEeeccc----ceEEEEEeecccceeeeec-Ccc----------eeEeecccccceeeecCC
Confidence 3567799999998 5577776655 444555 3443333332 222 368888998887776432
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc--eEeecCCCCCCccceEEEecC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~--~~~l~~~~~~~~~~~~~~spd 194 (715)
..+|.+||+.++. +...+-.....-+..+.|+|.
T Consensus 321 --------------------------------------------dr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~ 356 (423)
T KOG0313|consen 321 --------------------------------------------DRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPT 356 (423)
T ss_pred --------------------------------------------CCceeecCCCCCCCceeEEeeecchhhhhheecCCC
Confidence 3678888887653 222210222335778999998
Q ss_pred CCCCccEEEEEe
Q 005093 195 NEGLHQYLVFVG 206 (715)
Q Consensus 195 g~~~~~~i~~~~ 206 (715)
... ++.++
T Consensus 357 ~~~----~~~S~ 364 (423)
T KOG0313|consen 357 NEF----QLVSG 364 (423)
T ss_pred Cce----EEEEE
Confidence 886 55554
No 495
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=85.64 E-value=2.2 Score=39.09 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEE-ecCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAA-ARNP 593 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v-~~~~ 593 (715)
..++.++++-|.... ....++.++|||||+.++..++...+..+..+| +.||
T Consensus 91 a~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 345555666555543 356789999999999999888776444444443 4444
No 496
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=85.53 E-value=47 Score=34.19 Aligned_cols=184 Identities=14% Similarity=0.180 Sum_probs=0.0
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCcc-EEEEecCccccccccCCCcccceeecCC---CCeEEEEeec
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL-EKEFHVPQTVHGSVYADGWFEGISWNSD---ETLIAYVAEE 117 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~wSpD---g~~la~~~~~ 117 (715)
+......+|.||| +|++....+ .|+.+..+|.. ..+...+ .-...++..+.+++++|+ ..+|+.....
T Consensus 1 L~~P~~~a~~pdG-~l~v~e~~G----~i~~~~~~g~~~~~v~~~~---~v~~~~~~gllgia~~p~f~~n~~lYv~~t~ 72 (331)
T PF07995_consen 1 LNNPRSMAFLPDG-RLLVAERSG----RIWVVDKDGSLKTPVADLP---EVFADGERGLLGIAFHPDFASNGYLYVYYTN 72 (331)
T ss_dssp ESSEEEEEEETTS-CEEEEETTT----EEEEEETTTEECEEEEE-T---TTBTSTTBSEEEEEE-TTCCCC-EEEEEEEE
T ss_pred CCCceEEEEeCCC-cEEEEeCCc----eEEEEeCCCcCcceecccc---cccccccCCcccceeccccCCCCEEEEEEEc
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC------ceEeecCCCC----CCccc
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG------EVQAVKGIPK----SLSVG 187 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g------~~~~l~~~~~----~~~~~ 187 (715)
. ..........|..+.++.+ ....+...+. .....
T Consensus 73 ~-----------------------------------~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~ 117 (331)
T PF07995_consen 73 A-----------------------------------DEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGG 117 (331)
T ss_dssp E------------------------------------TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EE
T ss_pred c-----------------------------------cCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCc
Q ss_pred eEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-------------Cce
Q 005093 188 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-------------PVV 254 (715)
Q Consensus 188 ~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 254 (715)
.+.|.||| . |+++.-........... ......|.+++. .+. ..+
T Consensus 118 ~l~fgpDG-~----LYvs~G~~~~~~~~~~~-~~~~G~ilri~~-----------------dG~~p~dnP~~~~~~~~~~ 174 (331)
T PF07995_consen 118 GLAFGPDG-K----LYVSVGDGGNDDNAQDP-NSLRGKILRIDP-----------------DGSIPADNPFVGDDGADSE 174 (331)
T ss_dssp EEEE-TTS-E----EEEEEB-TTTGGGGCST-TSSTTEEEEEET-----------------TSSB-TTSTTTTSTTSTTT
T ss_pred cccCCCCC-c----EEEEeCCCCCccccccc-ccccceEEEecc-----------------cCcCCCCCccccCCCceEE
Q ss_pred ecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEee
Q 005093 255 NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 298 (715)
Q Consensus 255 ~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~ 298 (715)
.....-......+|.|....|+...+.. .....|.++
T Consensus 175 i~A~GlRN~~~~~~d~~tg~l~~~d~G~-------~~~dein~i 211 (331)
T PF07995_consen 175 IYAYGLRNPFGLAFDPNTGRLWAADNGP-------DGWDEINRI 211 (331)
T ss_dssp EEEE--SEEEEEEEETTTTEEEEEEE-S-------SSSEEEEEE
T ss_pred EEEeCCCccccEEEECCCCcEEEEccCC-------CCCcEEEEe
No 497
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=85.34 E-value=1.5 Score=40.48 Aligned_cols=51 Identities=16% Similarity=0.272 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh--C----CCceeEEEecCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ--A----PDKFVAAAARNP 593 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~--~----p~~~~~~v~~~~ 593 (715)
..++.+.|+...++ ....+|+|+|+|.|+.++..++.. . .+++.+++++.-
T Consensus 64 ~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 64 VANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred HHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 34455555544444 345799999999999999998876 2 236777776543
No 498
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=85.32 E-value=1.4 Score=44.18 Aligned_cols=147 Identities=20% Similarity=0.182 Sum_probs=82.6
Q ss_pred hhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecC-Ccchhh----hhccCCCCCCcee-ee
Q 005093 541 VNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN-PLCNLA----LMVGTTDIPDWCY-VE 613 (715)
Q Consensus 541 ~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~-~~~~~~----~~~~~~~~~~~~~-~~ 613 (715)
+..+..|++-...+ ..+..+...+.|.|--|..+...|...|. +.++|... -..+.. .++... ...|.. ..
T Consensus 214 v~a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDpr-v~aIvp~v~D~Lni~a~L~hiyrsY-Ggnwpi~l~ 291 (507)
T COG4287 214 VYAVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPR-VFAIVPFVYDNLNIEAQLLHIYRSY-GGNWPIKLA 291 (507)
T ss_pred HHHHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcc-hhhhhhhHHhhcccHHHHHHHHHhh-CCCCCcccc
Confidence 34444555544332 22556789999999999999888876664 44444221 122211 111000 011110 00
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhc-----cCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHI-----SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~-----~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
.|..++.......| .......-.+|+.+. .++..|-+|+.+..|...+++.+.-+++.|.. ..-+...|+
T Consensus 292 pyyaegi~erl~tp--~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG---~kaLrmvPN 366 (507)
T COG4287 292 PYYAEGIDERLETP--LFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPG---EKALRMVPN 366 (507)
T ss_pred hhHhhhHHHhhcCH--HHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCC---ceeeeeCCC
Confidence 11111111111111 122223334666554 67889999999999999999999999988853 355889999
Q ss_pred CCccCC
Q 005093 689 DVHGIE 694 (715)
Q Consensus 689 ~~H~~~ 694 (715)
..|...
T Consensus 367 ~~H~~~ 372 (507)
T COG4287 367 DPHNLI 372 (507)
T ss_pred Ccchhh
Confidence 999764
No 499
>PLN02162 triacylglycerol lipase
Probab=85.28 E-value=1.4 Score=46.26 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG 579 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 579 (715)
...+.+.++.+.++. ...++.+.|||+||.+|..+++
T Consensus 261 y~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 345555565555442 3468999999999999988754
No 500
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=84.79 E-value=50 Score=33.88 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=75.4
Q ss_pred EEeeCCCCceEEEEecCC---CCCCeEEEEecCCccEEEEecCccc----c--ccccCCCcccceeecCCCCeEEEEeec
Q 005093 47 AVVPSPSGSKLLVVRNPE---NESPIQFELWSQSQLEKEFHVPQTV----H--GSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
..++.++|..+ +..+.+ +....|+.+...|+..+.+.++... + ...-.+..+.+++++|||+.|+.+.+.
T Consensus 89 gi~~~~~g~~~-is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~ 167 (326)
T PF13449_consen 89 GIAVPPDGSFW-ISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMES 167 (326)
T ss_pred HeEEecCCCEE-EEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECc
Confidence 34555666433 233321 0126788887557665544443322 0 223345577899999999988887665
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC-Cc-----eEeecCC---CCCCccce
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-GE-----VQAVKGI---PKSLSVGQ 188 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-g~-----~~~l~~~---~~~~~~~~ 188 (715)
.-.... . ...........|+.+|..+ ++ ..++... .....+++
T Consensus 168 ~l~~d~----------~------------------~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd 219 (326)
T PF13449_consen 168 PLKQDG----------P------------------RANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISD 219 (326)
T ss_pred cccCCC----------c------------------ccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCcee
Confidence 411100 0 0000011225677777765 21 1122100 14567888
Q ss_pred EEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 189 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 189 ~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
+.+-||++- ++.-...... ......||.+++
T Consensus 220 ~~al~d~~l----LvLER~~~~~--------~~~~~ri~~v~l 250 (326)
T PF13449_consen 220 IAALPDGRL----LVLERDFSPG--------TGNYKRIYRVDL 250 (326)
T ss_pred EEEECCCcE----EEEEccCCCC--------ccceEEEEEEEc
Confidence 999999986 6655421110 112347999997
Done!