Query 005093
Match_columns 715
No_of_seqs 491 out of 3711
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 15:08:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 2.2E-54 7.6E-59 498.2 46.2 588 13-715 89-726 (740)
2 3azo_A Aminopeptidase; POP fam 100.0 3.9E-52 1.3E-56 474.9 52.5 571 15-715 48-649 (662)
3 2xdw_A Prolyl endopeptidase; a 100.0 5.9E-50 2E-54 459.4 55.3 576 14-715 96-705 (710)
4 3o4h_A Acylamino-acid-releasin 100.0 2.7E-51 9.2E-56 460.3 38.9 543 45-715 24-580 (582)
5 1xfd_A DIP, dipeptidyl aminope 100.0 1.3E-50 4.4E-55 467.4 41.4 592 14-715 89-722 (723)
6 3iuj_A Prolyl endopeptidase; h 100.0 3.5E-49 1.2E-53 450.2 50.6 537 44-715 130-685 (693)
7 2ecf_A Dipeptidyl peptidase IV 100.0 9.5E-49 3.3E-53 453.0 49.8 582 16-715 129-740 (741)
8 2bkl_A Prolyl endopeptidase; m 100.0 1.1E-48 3.8E-53 447.4 49.0 567 15-715 93-676 (695)
9 2z3z_A Dipeptidyl aminopeptida 100.0 1.6E-48 5.3E-53 448.5 49.5 577 16-714 101-706 (706)
10 1yr2_A Prolyl oligopeptidase; 100.0 1.1E-47 3.6E-52 442.3 52.6 567 15-715 132-718 (741)
11 1z68_A Fibroblast activation p 100.0 3.2E-49 1.1E-53 455.2 39.8 589 15-715 35-719 (719)
12 2xe4_A Oligopeptidase B; hydro 100.0 6.4E-47 2.2E-51 433.7 52.9 532 44-715 175-742 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 3.9E-39 1.3E-43 359.7 41.8 471 162-715 216-707 (711)
14 3hxk_A Sugar hydrolase; alpha- 99.9 3.2E-24 1.1E-28 215.8 20.3 231 457-714 19-266 (276)
15 4ao6_A Esterase; hydrolase, th 99.9 5.8E-24 2E-28 211.2 21.7 208 459-715 37-259 (259)
16 3f67_A Putative dienelactone h 99.9 3.8E-24 1.3E-28 210.4 17.9 214 461-713 14-241 (241)
17 3pe7_A Oligogalacturonate lyas 99.9 6.7E-24 2.3E-28 224.7 19.2 323 17-412 12-385 (388)
18 2wtm_A EST1E; hydrolase; 1.60A 99.9 9E-24 3.1E-28 209.2 18.5 240 461-715 9-250 (251)
19 3bxp_A Putative lipase/esteras 99.9 4.8E-23 1.6E-27 207.3 23.2 219 461-713 12-270 (277)
20 3doh_A Esterase; alpha-beta hy 99.9 3.9E-23 1.3E-27 217.7 22.3 216 456-715 148-380 (380)
21 3bjr_A Putative carboxylestera 99.9 1.6E-23 5.4E-28 211.6 17.4 227 457-713 24-282 (283)
22 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 7E-23 2.4E-27 216.5 21.9 229 461-715 135-365 (386)
23 3k2i_A Acyl-coenzyme A thioest 99.9 7.9E-23 2.7E-27 218.5 22.1 231 464-715 144-412 (422)
24 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.7E-22 2.6E-26 210.4 28.9 249 16-387 159-408 (415)
25 3ebl_A Gibberellin receptor GI 99.9 4E-23 1.4E-27 215.6 17.2 231 456-715 68-352 (365)
26 2o2g_A Dienelactone hydrolase; 99.9 1.6E-22 5.5E-27 196.0 20.2 201 461-715 20-223 (223)
27 4fbl_A LIPS lipolytic enzyme; 99.9 3E-22 1E-26 201.7 22.4 221 479-713 49-281 (281)
28 3pfb_A Cinnamoyl esterase; alp 99.9 7.2E-23 2.5E-27 204.9 17.3 240 459-713 28-267 (270)
29 1zi8_A Carboxymethylenebutenol 99.9 1.4E-22 4.9E-27 198.3 18.7 209 456-715 7-233 (236)
30 2i3d_A AGR_C_3351P, hypothetic 99.9 8.8E-22 3E-26 194.6 24.4 203 457-715 28-234 (249)
31 3hlk_A Acyl-coenzyme A thioest 99.9 1.5E-22 5E-27 217.4 19.8 234 464-715 160-428 (446)
32 3ga7_A Acetyl esterase; phosph 99.9 4.7E-22 1.6E-26 205.0 22.9 227 456-714 67-322 (326)
33 1vlq_A Acetyl xylan esterase; 99.9 9.8E-23 3.4E-27 211.4 17.4 242 456-715 72-335 (337)
34 3fak_A Esterase/lipase, ESTE5; 99.9 2.8E-22 9.5E-27 206.0 19.9 224 464-714 66-308 (322)
35 3ksr_A Putative serine hydrola 99.9 1.6E-22 5.6E-27 204.8 15.3 226 461-714 14-241 (290)
36 3fcy_A Xylan esterase 1; alpha 99.9 2.2E-22 7.7E-27 209.5 16.1 241 456-713 86-344 (346)
37 3trd_A Alpha/beta hydrolase; c 99.9 2.5E-21 8.6E-26 185.5 20.7 195 456-710 10-207 (208)
38 2hdw_A Hypothetical protein PA 99.9 1.6E-21 5.4E-26 204.8 20.3 247 456-714 72-367 (367)
39 2zsh_A Probable gibberellin re 99.9 3.4E-21 1.2E-25 200.7 22.1 228 462-713 80-351 (351)
40 3hju_A Monoglyceride lipase; a 99.9 1E-20 3.6E-25 196.4 25.6 240 456-714 39-312 (342)
41 1l7a_A Cephalosporin C deacety 99.9 1.6E-21 5.5E-26 200.1 18.5 241 456-715 60-317 (318)
42 3fcx_A FGH, esterase D, S-form 99.9 9.7E-22 3.3E-26 198.2 15.7 234 459-715 24-281 (282)
43 3pe6_A Monoglyceride lipase; a 99.9 2.3E-20 7.9E-25 189.5 25.8 240 456-714 21-294 (303)
44 3i6y_A Esterase APC40077; lipa 99.9 2.3E-21 8E-26 195.2 18.2 233 460-715 26-279 (280)
45 2fuk_A XC6422 protein; A/B hyd 99.9 6.7E-21 2.3E-25 184.3 20.7 200 457-715 15-217 (220)
46 1jfr_A Lipase; serine hydrolas 99.9 6.3E-21 2.2E-25 190.0 20.6 188 466-715 40-232 (262)
47 3vis_A Esterase; alpha/beta-hy 99.9 4.4E-21 1.5E-25 195.7 19.3 190 461-715 80-276 (306)
48 2hm7_A Carboxylesterase; alpha 99.9 4.4E-21 1.5E-25 196.3 19.0 230 457-715 53-310 (310)
49 1mpx_A Alpha-amino acid ester 99.9 1.1E-21 3.9E-26 218.2 15.5 254 456-715 29-355 (615)
50 3h04_A Uncharacterized protein 99.9 1.7E-20 5.8E-25 187.7 22.6 233 456-715 7-274 (275)
51 3ls2_A S-formylglutathione hyd 99.9 4.9E-21 1.7E-25 192.8 18.6 233 460-715 24-279 (280)
52 1lzl_A Heroin esterase; alpha/ 99.9 7E-21 2.4E-25 196.0 20.0 242 456-715 55-317 (323)
53 3qh4_A Esterase LIPW; structur 99.9 7E-22 2.4E-26 202.5 12.5 227 456-715 64-316 (317)
54 1vkh_A Putative serine hydrola 99.9 1.1E-21 3.6E-26 197.0 13.4 208 477-710 37-272 (273)
55 3k6k_A Esterase/lipase; alpha/ 99.9 1.1E-20 3.7E-25 194.2 20.2 222 461-715 66-309 (322)
56 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-19 3.8E-24 193.7 28.7 244 52-411 141-387 (415)
57 4e15_A Kynurenine formamidase; 99.9 5.2E-22 1.8E-26 202.5 10.2 200 464-692 67-280 (303)
58 2wir_A Pesta, alpha/beta hydro 99.9 1.2E-21 3.9E-26 201.0 12.7 232 456-715 55-312 (313)
59 2o7r_A CXE carboxylesterase; a 99.9 5.2E-21 1.8E-25 198.3 17.5 233 462-714 63-331 (338)
60 2gop_A Trilobed protease; beta 99.9 1.5E-20 5.3E-25 195.5 21.1 298 2-408 29-330 (347)
61 3ain_A 303AA long hypothetical 99.9 1.1E-20 3.7E-25 194.0 19.5 225 458-714 71-320 (323)
62 3fnb_A Acylaminoacyl peptidase 99.9 1.9E-20 6.4E-25 199.0 21.6 237 461-715 143-402 (405)
63 2b9v_A Alpha-amino acid ester 99.9 8E-21 2.7E-25 212.0 19.0 254 456-715 41-367 (652)
64 3e4d_A Esterase D; S-formylglu 99.9 1.8E-21 6E-26 195.9 12.4 234 459-715 23-278 (278)
65 2c7b_A Carboxylesterase, ESTE1 99.8 1.6E-20 5.4E-25 192.3 18.7 235 457-715 53-309 (311)
66 3llc_A Putative hydrolase; str 99.8 1.5E-20 5.1E-25 187.7 18.0 239 458-712 18-268 (270)
67 1jkm_A Brefeldin A esterase; s 99.8 5.5E-21 1.9E-25 199.7 15.1 236 456-713 86-357 (361)
68 1fj2_A Protein (acyl protein t 99.8 2E-20 6.7E-25 182.5 18.0 194 469-715 14-229 (232)
69 4h0c_A Phospholipase/carboxyle 99.8 3.2E-21 1.1E-25 184.1 12.0 189 478-712 19-210 (210)
70 4a5s_A Dipeptidyl peptidase 4 99.8 1.3E-19 4.4E-24 208.4 27.4 295 16-412 36-401 (740)
71 3og9_A Protein YAHD A copper i 99.8 3.2E-20 1.1E-24 177.9 18.4 191 469-713 8-208 (209)
72 1ufo_A Hypothetical protein TT 99.8 2.4E-20 8.2E-25 182.4 17.2 210 465-714 13-235 (238)
73 3dkr_A Esterase D; alpha beta 99.8 1.7E-20 5.7E-25 185.0 16.0 220 479-714 20-249 (251)
74 2pbl_A Putative esterase/lipas 99.8 1.8E-20 6.1E-25 186.7 15.4 194 461-696 47-247 (262)
75 3c5m_A Oligogalacturonate lyas 99.8 3.8E-20 1.3E-24 196.2 18.3 311 29-413 22-386 (396)
76 3bdi_A Uncharacterized protein 99.8 1.4E-19 4.7E-24 173.0 19.7 193 460-712 11-206 (207)
77 1lns_A X-prolyl dipeptidyl ami 99.8 5.1E-20 1.7E-24 208.5 19.2 245 458-715 179-522 (763)
78 3rm3_A MGLP, thermostable mono 99.8 2.2E-19 7.6E-24 179.5 21.6 219 480-714 39-269 (270)
79 1auo_A Carboxylesterase; hydro 99.8 7.5E-20 2.6E-24 176.5 17.1 197 469-715 5-218 (218)
80 4b6g_A Putative esterase; hydr 99.8 3.8E-20 1.3E-24 186.6 15.4 233 459-715 30-283 (283)
81 3cn9_A Carboxylesterase; alpha 99.8 3.8E-19 1.3E-23 172.8 21.3 184 477-714 20-226 (226)
82 3d7r_A Esterase; alpha/beta fo 99.8 2.1E-19 7.3E-24 185.0 20.5 220 465-715 84-323 (326)
83 4f0j_A Probable hydrolytic enz 99.8 5.5E-19 1.9E-23 180.6 22.9 239 461-713 28-314 (315)
84 2uz0_A Esterase, tributyrin es 99.8 2.8E-20 9.5E-25 185.4 12.6 230 460-715 16-257 (263)
85 1jjf_A Xylanase Z, endo-1,4-be 99.8 1.5E-19 5.3E-24 180.6 17.6 206 461-713 42-260 (268)
86 1jji_A Carboxylesterase; alpha 99.8 2.8E-20 9.4E-25 190.2 11.5 222 458-712 62-310 (311)
87 3mve_A FRSA, UPF0255 protein V 99.8 1.7E-19 5.8E-24 191.2 18.0 230 461-715 176-414 (415)
88 3b5e_A MLL8374 protein; NP_108 99.8 2E-19 6.7E-24 174.4 16.7 198 462-714 15-217 (223)
89 2ecf_A Dipeptidyl peptidase IV 99.8 1.5E-18 5.2E-23 200.0 27.0 317 43-410 37-414 (741)
90 2h1i_A Carboxylesterase; struc 99.8 3.3E-19 1.1E-23 173.2 17.7 196 461-714 23-226 (226)
91 4fhz_A Phospholipase/carboxyle 99.8 2.3E-19 7.8E-24 179.0 16.5 198 468-714 55-266 (285)
92 2ojh_A Uncharacterized protein 99.8 4.6E-18 1.6E-22 171.8 26.3 265 11-399 17-294 (297)
93 2qjw_A Uncharacterized protein 99.8 5.2E-19 1.8E-23 164.3 17.6 174 479-712 2-175 (176)
94 3d0k_A Putative poly(3-hydroxy 99.8 5.9E-19 2E-23 179.9 19.6 216 459-712 34-286 (304)
95 3u0v_A Lysophospholipase-like 99.8 1.5E-18 5.3E-23 170.0 21.8 195 477-715 19-232 (239)
96 2qru_A Uncharacterized protein 99.8 2.4E-18 8.1E-23 172.4 23.0 230 461-713 13-274 (274)
97 2r8b_A AGR_C_4453P, uncharacte 99.8 3.9E-19 1.3E-23 175.7 16.2 190 468-715 53-249 (251)
98 1tht_A Thioesterase; 2.10A {Vi 99.8 5.7E-19 2E-23 179.3 17.7 237 458-711 13-262 (305)
99 1xfd_A DIP, dipeptidyl aminope 99.8 3.3E-18 1.1E-22 196.7 25.9 297 15-410 36-394 (723)
100 2fx5_A Lipase; alpha-beta hydr 99.8 8.3E-19 2.9E-23 174.1 17.9 184 467-714 34-228 (258)
101 1k8q_A Triacylglycerol lipase, 99.8 3.4E-19 1.2E-23 187.5 15.8 247 456-713 31-377 (377)
102 2y6u_A Peroxisomal membrane pr 99.8 5.8E-19 2E-23 187.4 17.2 249 456-714 24-345 (398)
103 1imj_A CIB, CCG1-interacting f 99.8 2.3E-19 7.9E-24 172.0 12.2 193 460-713 14-209 (210)
104 1qlw_A Esterase; anisotropic r 99.8 1.8E-18 6.3E-23 177.9 19.4 200 464-714 49-321 (328)
105 3ia2_A Arylesterase; alpha-bet 99.8 7.8E-18 2.7E-22 168.4 21.8 231 458-712 4-271 (271)
106 1tqh_A Carboxylesterase precur 99.8 4.1E-18 1.4E-22 167.9 19.4 217 481-713 16-245 (247)
107 3sty_A Methylketone synthase 1 99.8 3.2E-18 1.1E-22 170.6 17.0 222 477-713 8-266 (267)
108 4ezi_A Uncharacterized protein 99.8 4E-18 1.4E-22 176.7 18.1 244 462-715 57-371 (377)
109 1zoi_A Esterase; alpha/beta hy 99.8 1E-17 3.5E-22 168.0 20.7 231 459-711 6-275 (276)
110 1a88_A Chloroperoxidase L; hal 99.8 1.8E-17 6.1E-22 166.1 22.4 231 459-711 5-274 (275)
111 3pe7_A Oligogalacturonate lyas 99.8 4.3E-18 1.5E-22 179.9 18.7 188 99-368 190-386 (388)
112 4fle_A Esterase; structural ge 99.8 2.2E-18 7.4E-23 164.2 14.6 188 481-712 2-191 (202)
113 1a8s_A Chloroperoxidase F; hal 99.8 2.4E-17 8.4E-22 164.9 23.0 229 459-711 5-272 (273)
114 3r0v_A Alpha/beta hydrolase fo 99.8 1.1E-17 3.8E-22 166.0 20.0 222 457-712 7-262 (262)
115 3v48_A Aminohydrolase, putativ 99.8 1.2E-17 4.2E-22 166.7 20.2 219 479-714 13-261 (268)
116 3dqz_A Alpha-hydroxynitrIle ly 99.8 1.9E-18 6.6E-23 171.1 14.2 219 481-714 4-258 (258)
117 1a8q_A Bromoperoxidase A1; hal 99.8 1.7E-17 5.9E-22 166.1 21.0 227 459-711 5-273 (274)
118 2pl5_A Homoserine O-acetyltran 99.8 2.3E-17 7.8E-22 172.8 22.7 247 461-713 29-365 (366)
119 3iii_A COCE/NOND family hydrol 99.8 1.1E-18 3.9E-23 189.7 13.1 243 455-715 44-321 (560)
120 1sfr_A Antigen 85-A; alpha/bet 99.8 4.8E-18 1.6E-22 172.8 17.0 240 462-715 20-284 (304)
121 1brt_A Bromoperoxidase A2; hal 99.8 4.7E-18 1.6E-22 170.6 16.0 213 482-711 24-276 (277)
122 3fob_A Bromoperoxidase; struct 99.8 1.3E-17 4.6E-22 167.7 18.8 212 481-711 27-280 (281)
123 3kxp_A Alpha-(N-acetylaminomet 99.8 3.8E-18 1.3E-22 174.7 14.9 225 461-712 56-314 (314)
124 3i2k_A Cocaine esterase; alpha 99.8 1.3E-18 4.4E-23 192.2 11.8 244 456-715 13-323 (587)
125 3azo_A Aminopeptidase; POP fam 99.8 7.6E-18 2.6E-22 191.5 18.7 272 43-412 24-326 (662)
126 1q0r_A RDMC, aclacinomycin met 99.8 9.6E-18 3.3E-22 170.4 17.4 231 460-714 8-294 (298)
127 3om8_A Probable hydrolase; str 99.8 2.2E-17 7.6E-22 164.6 19.4 227 458-711 10-265 (266)
128 3g8y_A SUSD/RAGB-associated es 99.8 7.2E-18 2.5E-22 177.6 16.5 140 456-598 91-262 (391)
129 1r88_A MPT51/MPB51 antigen; AL 99.8 4.6E-18 1.6E-22 170.6 14.1 232 461-713 21-272 (280)
130 3vdx_A Designed 16NM tetrahedr 99.8 2E-17 6.8E-22 178.0 20.0 232 457-714 8-280 (456)
131 3fsg_A Alpha/beta superfamily 99.8 4.1E-18 1.4E-22 170.0 13.6 217 480-713 20-268 (272)
132 2qm0_A BES; alpha-beta structu 99.8 2.3E-18 7.8E-23 172.4 11.3 217 461-710 28-272 (275)
133 2yys_A Proline iminopeptidase- 99.8 7.5E-18 2.6E-22 170.0 15.2 230 460-713 10-276 (286)
134 4dnp_A DAD2; alpha/beta hydrol 99.8 9.9E-18 3.4E-22 166.9 15.8 221 480-713 19-269 (269)
135 4f21_A Carboxylesterase/phosph 99.7 3.6E-17 1.2E-21 159.7 18.8 203 465-715 25-245 (246)
136 2qs9_A Retinoblastoma-binding 99.7 1.1E-17 3.9E-22 158.0 14.9 181 480-714 3-186 (194)
137 2xua_A PCAD, 3-oxoadipate ENOL 99.7 4.2E-18 1.4E-22 169.9 12.0 228 461-712 10-264 (266)
138 2ocg_A Valacyclovir hydrolase; 99.7 5.9E-17 2E-21 160.3 19.9 214 481-710 23-253 (254)
139 3qvm_A OLEI00960; structural g 99.7 1.1E-17 3.8E-22 167.8 14.8 218 482-714 29-279 (282)
140 2r11_A Carboxylesterase NP; 26 99.7 3.8E-17 1.3E-21 166.7 18.8 227 461-712 53-306 (306)
141 3u1t_A DMMA haloalkane dehalog 99.7 8.8E-18 3E-22 171.1 13.9 227 461-714 17-297 (309)
142 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 1.3E-17 4.6E-22 168.2 15.1 216 481-712 33-285 (286)
143 1gkl_A Endo-1,4-beta-xylanase 99.7 7.9E-17 2.7E-21 162.7 20.7 196 457-693 46-272 (297)
144 3i1i_A Homoserine O-acetyltran 99.7 1.4E-17 4.7E-22 175.1 15.7 233 479-714 40-373 (377)
145 3qit_A CURM TE, polyketide syn 99.7 1E-17 3.6E-22 168.1 14.0 214 460-695 11-273 (286)
146 3d59_A Platelet-activating fac 99.7 9.2E-18 3.2E-22 176.8 13.8 192 477-715 94-351 (383)
147 2z3z_A Dipeptidyl aminopeptida 99.7 5.7E-16 1.9E-20 177.5 29.8 263 44-412 83-392 (706)
148 1c4x_A BPHD, protein (2-hydrox 99.7 2.8E-17 9.5E-22 165.8 16.7 232 460-712 14-284 (285)
149 3nuz_A Putative acetyl xylan e 99.7 1.2E-17 4.2E-22 176.2 14.6 140 456-598 96-267 (398)
150 1iup_A META-cleavage product h 99.7 7.5E-18 2.6E-22 169.6 12.3 215 481-712 25-272 (282)
151 1mtz_A Proline iminopeptidase; 99.7 3E-17 1E-21 166.2 16.4 232 461-714 13-293 (293)
152 1z68_A Fibroblast activation p 99.7 6.3E-17 2.1E-21 185.8 21.1 312 46-412 19-394 (719)
153 3hss_A Putative bromoperoxidas 99.7 4.8E-17 1.6E-21 164.5 17.5 216 480-713 42-291 (293)
154 1hkh_A Gamma lactamase; hydrol 99.7 1.6E-17 5.5E-22 166.9 13.7 213 482-711 24-278 (279)
155 2wue_A 2-hydroxy-6-OXO-6-pheny 99.7 1.9E-17 6.4E-22 167.5 14.2 231 461-712 21-289 (291)
156 3oos_A Alpha/beta hydrolase fa 99.7 2.3E-17 7.7E-22 165.1 14.5 214 480-709 22-277 (278)
157 3nwo_A PIP, proline iminopepti 99.7 2.8E-17 9.4E-22 169.5 15.2 236 461-713 36-322 (330)
158 2xt0_A Haloalkane dehalogenase 99.7 6.1E-17 2.1E-21 164.2 16.8 229 463-711 33-296 (297)
159 3bf7_A Esterase YBFF; thioeste 99.7 1.9E-17 6.3E-22 164.1 12.6 215 480-713 15-255 (255)
160 1b6g_A Haloalkane dehalogenase 99.7 1.8E-17 6.2E-22 169.2 12.8 230 463-712 34-308 (310)
161 1uxo_A YDEN protein; hydrolase 99.7 4.7E-17 1.6E-21 153.5 14.6 180 481-711 4-188 (192)
162 2wfl_A Polyneuridine-aldehyde 99.7 8E-17 2.7E-21 160.3 16.8 218 479-711 8-263 (264)
163 3h2g_A Esterase; xanthomonas o 99.7 2.6E-17 9E-22 174.2 13.6 132 462-598 60-212 (397)
164 3e0x_A Lipase-esterase related 99.7 2.8E-17 9.7E-22 161.0 12.9 208 479-709 14-244 (245)
165 1u2e_A 2-hydroxy-6-ketonona-2, 99.7 4.5E-17 1.5E-21 164.6 14.1 215 482-712 37-288 (289)
166 3p2m_A Possible hydrolase; alp 99.7 2.9E-17 1E-21 169.4 12.9 213 481-712 81-329 (330)
167 2b61_A Homoserine O-acetyltran 99.7 8.7E-17 3E-21 169.1 16.6 246 461-712 42-376 (377)
168 3r40_A Fluoroacetate dehalogen 99.7 1.2E-16 4.1E-21 162.3 16.4 233 460-713 20-303 (306)
169 3g9x_A Haloalkane dehalogenase 99.7 1.5E-17 5.3E-22 168.4 9.5 225 461-712 18-292 (299)
170 1xkl_A SABP2, salicylic acid-b 99.7 1.4E-16 4.7E-21 159.5 16.1 218 481-713 4-259 (273)
171 1j1i_A META cleavage compound 99.7 2.8E-17 9.4E-22 166.8 10.9 217 481-714 36-283 (296)
172 3i28_A Epoxide hydrolase 2; ar 99.7 2.7E-16 9.3E-21 174.5 19.6 232 460-714 245-546 (555)
173 2ojh_A Uncharacterized protein 99.7 1.8E-15 6E-20 152.6 23.9 229 68-412 22-259 (297)
174 3bwx_A Alpha/beta hydrolase; Y 99.7 1.7E-16 5.7E-21 160.0 16.1 231 458-712 11-284 (285)
175 2cjp_A Epoxide hydrolase; HET: 99.7 5.6E-16 1.9E-20 159.6 20.4 237 461-712 19-327 (328)
176 2xmz_A Hydrolase, alpha/beta h 99.7 6.4E-17 2.2E-21 161.5 12.8 213 481-713 16-266 (269)
177 3afi_E Haloalkane dehalogenase 99.7 9.7E-17 3.3E-21 164.3 14.2 229 461-713 15-301 (316)
178 1k32_A Tricorn protease; prote 99.7 8.2E-16 2.8E-20 183.6 24.2 156 185-412 297-462 (1045)
179 2e3j_A Epoxide hydrolase EPHB; 99.7 2E-16 6.9E-21 165.0 16.5 121 461-595 11-131 (356)
180 2xdw_A Prolyl endopeptidase; a 99.7 8.4E-16 2.9E-20 175.8 22.9 270 49-412 78-369 (710)
181 2rau_A Putative esterase; NP_3 99.7 2.6E-17 8.9E-22 171.7 9.5 222 479-713 48-353 (354)
182 1dqz_A 85C, protein (antigen 8 99.7 3.4E-16 1.2E-20 157.2 17.3 237 462-714 17-278 (280)
183 3c6x_A Hydroxynitrilase; atomi 99.7 1.6E-16 5.5E-21 157.4 13.8 218 481-713 3-256 (257)
184 1wm1_A Proline iminopeptidase; 99.7 7.7E-16 2.6E-20 157.7 19.3 118 461-595 23-140 (317)
185 1isp_A Lipase; alpha/beta hydr 99.7 5.6E-16 1.9E-20 144.5 16.6 169 481-713 3-176 (181)
186 3bdv_A Uncharacterized protein 99.7 1.1E-15 3.6E-20 144.0 18.6 171 480-714 16-188 (191)
187 4g9e_A AHL-lactonase, alpha/be 99.7 4.1E-17 1.4E-21 163.3 9.4 219 480-713 23-269 (279)
188 2vat_A Acetyl-COA--deacetylcep 99.7 6E-17 2.1E-21 174.4 10.6 228 480-715 108-444 (444)
189 3c5m_A Oligogalacturonate lyas 99.7 4.1E-15 1.4E-19 157.3 23.8 268 16-374 60-392 (396)
190 1wom_A RSBQ, sigma factor SIGB 99.7 3.3E-16 1.1E-20 156.6 14.4 220 481-714 20-271 (271)
191 1ehy_A Protein (soluble epoxid 99.7 9.3E-16 3.2E-20 155.3 17.4 228 461-710 17-293 (294)
192 2bkl_A Prolyl endopeptidase; m 99.7 2.2E-15 7.6E-20 171.8 22.5 270 45-410 70-350 (695)
193 1azw_A Proline iminopeptidase; 99.7 1.7E-15 5.9E-20 154.7 19.4 117 461-594 20-136 (313)
194 3fla_A RIFR; alpha-beta hydrol 99.7 7.7E-16 2.6E-20 153.2 16.3 218 477-713 16-249 (267)
195 1k32_A Tricorn protease; prote 99.7 3.3E-15 1.1E-19 178.4 24.3 288 15-397 184-492 (1045)
196 3kda_A CFTR inhibitory factor 99.7 1.8E-16 6.3E-21 160.8 11.5 226 460-713 17-294 (301)
197 2qvb_A Haloalkane dehalogenase 99.7 1.4E-16 4.7E-21 161.2 10.4 229 461-713 16-292 (297)
198 3guu_A Lipase A; protein struc 99.7 1.9E-15 6.5E-20 158.5 19.2 244 456-714 81-406 (462)
199 1yr2_A Prolyl oligopeptidase; 99.7 3.2E-15 1.1E-19 171.7 22.9 270 45-410 109-394 (741)
200 3ibt_A 1H-3-hydroxy-4-oxoquino 99.7 9.2E-16 3.2E-20 152.3 15.2 228 461-711 7-263 (264)
201 1r3d_A Conserved hypothetical 99.7 6.3E-16 2.2E-20 153.8 13.4 210 481-714 16-263 (264)
202 2q0x_A Protein DUF1749, unchar 99.6 1.1E-15 3.7E-20 157.5 15.4 211 480-713 37-294 (335)
203 1ycd_A Hypothetical 27.3 kDa p 99.6 1.8E-15 6E-20 148.5 16.0 203 480-715 4-239 (243)
204 2gop_A Trilobed protease; beta 99.6 2.3E-15 7.8E-20 156.3 17.6 249 43-408 15-290 (347)
205 1pja_A Palmitoyl-protein thioe 99.6 7.4E-16 2.5E-20 156.7 13.6 216 478-710 33-301 (302)
206 3c8d_A Enterochelin esterase; 99.6 5.7E-16 1.9E-20 163.0 13.0 212 461-713 178-397 (403)
207 2qmq_A Protein NDRG2, protein 99.6 2.5E-15 8.4E-20 151.4 17.1 233 461-711 19-285 (286)
208 2gzs_A IROE protein; enterobac 99.6 1.4E-15 4.9E-20 151.9 15.1 213 461-712 23-264 (278)
209 1m33_A BIOH protein; alpha-bet 99.6 2.8E-16 9.6E-21 155.8 9.5 208 482-712 13-255 (258)
210 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 3.7E-16 1.3E-20 158.6 10.5 227 460-713 16-293 (302)
211 3l80_A Putative uncharacterize 99.6 1.8E-16 6.3E-21 160.2 6.1 215 481-714 41-290 (292)
212 1l0q_A Surface layer protein; 99.6 6.5E-14 2.2E-18 147.8 25.5 266 14-412 10-276 (391)
213 2psd_A Renilla-luciferin 2-mon 99.6 1.9E-15 6.5E-20 154.8 13.2 115 461-593 29-144 (318)
214 3b12_A Fluoroacetate dehalogen 99.4 4.9E-17 1.7E-21 165.0 0.0 109 480-596 24-132 (304)
215 3vgz_A Uncharacterized protein 99.6 7E-13 2.4E-17 137.6 29.7 239 44-397 90-334 (353)
216 3iuj_A Prolyl endopeptidase; h 99.6 6.8E-14 2.3E-18 159.1 23.7 267 46-411 80-359 (693)
217 3u4y_A Uncharacterized protein 99.6 9.2E-13 3.1E-17 135.5 27.6 273 9-410 13-303 (331)
218 1pby_B Quinohemoprotein amine 99.6 2.9E-13 1E-17 139.3 23.5 290 13-413 8-312 (337)
219 3s25_A Hypothetical 7-bladed b 99.6 2.7E-13 9.1E-18 136.0 21.1 236 49-412 20-256 (302)
220 2xe4_A Oligopeptidase B; hydro 99.5 1.9E-13 6.5E-18 156.4 22.4 250 51-409 123-398 (751)
221 2wj6_A 1H-3-hydroxy-4-oxoquina 99.5 1.5E-14 5.3E-19 144.7 11.7 215 481-712 27-271 (276)
222 3o4h_A Acylamino-acid-releasin 99.5 7E-14 2.4E-18 156.1 17.8 224 15-372 89-320 (582)
223 4i19_A Epoxide hydrolase; stru 99.5 1.3E-13 4.4E-18 144.4 18.6 121 460-595 75-204 (388)
224 3qmv_A Thioesterase, REDJ; alp 99.5 1E-14 3.5E-19 146.4 9.2 213 480-709 50-279 (280)
225 3qyj_A ALR0039 protein; alpha/ 99.5 8.4E-14 2.9E-18 140.5 15.9 119 460-594 12-130 (291)
226 1qe3_A PNB esterase, para-nitr 99.5 1.4E-15 4.7E-20 163.7 2.7 228 459-695 79-316 (489)
227 3c5v_A PME-1, protein phosphat 99.5 1.9E-13 6.4E-18 139.8 17.9 105 480-594 37-145 (316)
228 3s25_A Hypothetical 7-bladed b 99.5 9E-13 3.1E-17 132.1 22.1 246 15-410 36-292 (302)
229 3pic_A CIP2; alpha/beta hydrol 99.5 4.3E-13 1.5E-17 133.7 17.6 218 462-715 89-346 (375)
230 3gff_A IROE-like serine hydrol 99.5 3.4E-14 1.1E-18 144.6 9.8 208 461-710 22-262 (331)
231 3vgz_A Uncharacterized protein 99.5 1E-11 3.4E-16 128.8 29.0 250 44-412 42-304 (353)
232 3scy_A Hypothetical bacterial 99.5 6.5E-12 2.2E-16 130.9 24.9 283 16-412 27-340 (361)
233 1ri6_A Putative isomerase YBHE 99.5 1.1E-11 3.6E-16 127.9 26.0 268 14-395 13-295 (343)
234 3hfq_A Uncharacterized protein 99.5 7.5E-12 2.6E-16 129.6 24.9 268 17-396 17-305 (347)
235 4g4g_A 4-O-methyl-glucuronoyl 99.5 9.3E-13 3.2E-17 132.6 17.0 216 463-715 123-380 (433)
236 3fle_A SE_1780 protein; struct 99.5 1.1E-12 3.8E-17 127.4 16.7 208 481-710 6-247 (249)
237 3u4y_A Uncharacterized protein 99.4 1.7E-11 5.7E-16 126.0 25.4 240 16-374 62-312 (331)
238 3hfq_A Uncharacterized protein 99.4 5.4E-12 1.8E-16 130.7 20.8 251 15-373 62-326 (347)
239 1gxr_A ESG1, transducin-like e 99.4 5.8E-11 2E-15 121.9 28.0 253 15-395 71-325 (337)
240 3lcr_A Tautomycetin biosynthet 99.4 4E-12 1.4E-16 129.7 18.2 215 478-713 78-302 (319)
241 4fol_A FGH, S-formylglutathion 99.4 4.4E-13 1.5E-17 134.0 10.6 233 461-715 24-297 (299)
242 3bws_A Protein LP49; two-domai 99.4 1.6E-11 5.4E-16 131.4 23.3 248 43-409 170-430 (433)
243 3ds8_A LIN2722 protein; unkonw 99.4 9.5E-13 3.3E-17 129.6 11.5 210 482-714 4-243 (254)
244 3lp5_A Putative cell surface h 99.4 4.6E-12 1.6E-16 123.0 14.8 199 482-712 5-233 (250)
245 1l0q_A Surface layer protein; 99.4 4.7E-11 1.6E-15 125.8 24.0 221 69-412 13-234 (391)
246 1kez_A Erythronolide synthase; 99.4 1.7E-12 5.9E-17 131.4 12.3 211 477-713 63-281 (300)
247 3g02_A Epoxide hydrolase; alph 99.4 1.7E-12 6E-17 136.3 12.1 120 461-594 93-219 (408)
248 1gxr_A ESG1, transducin-like e 99.4 1.6E-11 5.4E-16 126.1 18.8 276 43-411 10-296 (337)
249 3bws_A Protein LP49; two-domai 99.4 4.1E-11 1.4E-15 128.1 22.7 252 45-411 125-390 (433)
250 4h5i_A Guanine nucleotide-exch 99.4 5.4E-11 1.8E-15 124.1 22.1 199 44-363 135-342 (365)
251 3ow8_A WD repeat-containing pr 99.4 6.9E-11 2.4E-15 120.9 22.5 225 41-395 79-309 (321)
252 2d81_A PHB depolymerase; alpha 99.3 1.9E-12 6.4E-17 130.1 10.2 148 555-713 6-175 (318)
253 1ukc_A ESTA, esterase; fungi, 99.3 6.6E-13 2.2E-17 143.9 6.0 221 460-694 83-327 (522)
254 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.8E-10 9.6E-15 118.7 25.9 299 17-410 15-340 (365)
255 3zwl_B Eukaryotic translation 99.3 9.1E-11 3.1E-15 122.1 22.1 243 43-396 33-279 (369)
256 1ri6_A Putative isomerase YBHE 99.3 2.1E-10 7.2E-15 118.1 24.5 217 44-373 85-317 (343)
257 3ils_A PKS, aflatoxin biosynth 99.3 7.7E-12 2.6E-16 124.1 12.8 103 478-595 18-123 (265)
258 1jmx_B Amine dehydrogenase; ox 99.3 1.3E-10 4.6E-15 119.9 22.2 261 48-412 5-326 (349)
259 2ymu_A WD-40 repeat protein; u 99.3 7.2E-11 2.5E-15 131.4 21.5 221 43-394 345-567 (577)
260 4gqb_B Methylosome protein 50; 99.3 2.2E-10 7.4E-15 118.3 23.4 232 43-396 83-319 (344)
261 1tca_A Lipase; hydrolase(carbo 99.3 4.1E-12 1.4E-16 128.8 9.4 215 464-712 15-243 (317)
262 3ow8_A WD repeat-containing pr 99.3 6.9E-11 2.4E-15 120.9 18.6 214 14-360 100-317 (321)
263 2k2q_B Surfactin synthetase th 99.3 5.1E-12 1.8E-16 123.5 9.7 208 479-713 11-237 (242)
264 2vdu_B TRNA (guanine-N(7)-)-me 99.3 3.3E-10 1.1E-14 121.8 24.1 259 44-410 104-392 (450)
265 3zwl_B Eukaryotic translation 99.3 6.9E-10 2.3E-14 115.3 25.4 244 43-411 75-346 (369)
266 1pby_B Quinohemoprotein amine 99.3 2.5E-10 8.5E-15 117.2 21.0 227 69-412 12-270 (337)
267 4gqb_B Methylosome protein 50; 99.3 1.2E-10 4.2E-15 120.1 17.7 226 14-363 101-330 (344)
268 1r5m_A SIR4-interacting protei 99.3 2E-10 6.7E-15 122.1 19.9 265 43-395 109-413 (425)
269 1nr0_A Actin interacting prote 99.2 1.7E-09 5.7E-14 121.2 28.1 266 42-373 59-362 (611)
270 3scy_A Hypothetical bacterial 99.2 2.7E-10 9.2E-15 118.6 20.2 130 183-374 210-347 (361)
271 2ymu_A WD-40 repeat protein; u 99.2 3.4E-10 1.1E-14 126.0 22.1 222 43-395 304-527 (577)
272 2j04_A TAU60, YPL007P, hypothe 99.2 2.6E-10 9E-15 121.5 19.7 176 142-392 87-283 (588)
273 4g56_B MGC81050 protein; prote 99.2 3E-10 1E-14 118.1 19.4 229 43-392 95-328 (357)
274 1got_B GT-beta; complex (GTP-b 99.2 2.7E-10 9.2E-15 117.6 18.9 269 40-393 53-329 (340)
275 2h7c_A Liver carboxylesterase 99.2 7.4E-12 2.5E-16 136.5 7.4 133 459-596 95-233 (542)
276 3fm0_A Protein CIAO1; WDR39,SG 99.2 1E-09 3.5E-14 113.4 23.2 286 44-396 18-323 (345)
277 4ery_A WD repeat-containing pr 99.2 8E-10 2.7E-14 112.3 21.3 270 42-395 23-298 (312)
278 3dwl_C Actin-related protein 2 99.2 7.8E-11 2.7E-15 123.4 14.0 233 43-391 12-266 (377)
279 1nr0_A Actin interacting prote 99.2 4.1E-10 1.4E-14 126.2 20.3 226 42-395 18-258 (611)
280 3ei3_B DNA damage-binding prot 99.2 1.2E-08 4.2E-13 106.8 29.0 246 42-409 118-380 (383)
281 1jmx_B Amine dehydrogenase; ox 99.2 1.7E-09 5.8E-14 111.5 21.5 142 12-196 17-160 (349)
282 2pm9_A Protein WEB1, protein t 99.2 1.4E-09 4.8E-14 115.3 21.2 272 15-368 44-339 (416)
283 1k8k_C P40, ARP2/3 complex 41 99.2 6.1E-09 2.1E-13 108.4 25.6 234 43-391 9-259 (372)
284 4h5i_A Guanine nucleotide-exch 99.2 2.3E-09 7.8E-14 111.7 22.3 190 98-393 135-329 (365)
285 2mad_H Methylamine dehydrogena 99.2 3.7E-08 1.3E-12 102.4 31.0 260 46-413 69-352 (373)
286 1thg_A Lipase; hydrolase(carbo 99.2 1.7E-11 5.7E-16 133.5 5.9 134 459-595 102-252 (544)
287 1erj_A Transcriptional repress 99.2 4.8E-09 1.6E-13 110.5 24.2 212 43-366 65-287 (393)
288 3mkq_A Coatomer beta'-subunit; 99.1 1.5E-09 5.3E-14 126.0 22.2 237 43-411 14-259 (814)
289 3vl1_A 26S proteasome regulato 99.1 1.2E-09 4.2E-14 116.0 19.7 236 44-411 99-365 (420)
290 2aq5_A Coronin-1A; WD40 repeat 99.1 3.1E-09 1E-13 112.3 22.2 234 40-391 79-328 (402)
291 1ei9_A Palmitoyl protein thioe 99.1 2.2E-10 7.7E-15 113.8 12.4 105 483-594 7-115 (279)
292 1r5m_A SIR4-interacting protei 99.1 2.1E-09 7.2E-14 114.0 20.8 288 43-412 46-362 (425)
293 2pm9_A Protein WEB1, protein t 99.1 7.9E-10 2.7E-14 117.2 17.0 295 43-412 13-338 (416)
294 1gpl_A RP2 lipase; serine este 99.1 2.6E-11 9E-16 128.3 5.3 112 479-595 68-181 (432)
295 3iz6_a 40S ribosomal protein R 99.1 1.7E-08 5.8E-13 105.7 26.8 276 41-392 65-360 (380)
296 1nir_A Nitrite reductase; hemo 99.1 1.8E-08 6.3E-13 110.4 27.8 266 45-413 181-516 (543)
297 2ogt_A Thermostable carboxyles 99.1 1.1E-10 3.7E-15 125.9 9.6 134 459-596 81-224 (498)
298 3vl1_A 26S proteasome regulato 99.1 2.9E-09 9.9E-14 113.1 20.4 256 45-412 59-323 (420)
299 2vdu_B TRNA (guanine-N(7)-)-me 99.1 7.3E-09 2.5E-13 111.3 23.6 142 162-373 125-278 (450)
300 2pbi_B Guanine nucleotide-bind 99.1 2.5E-09 8.5E-14 110.9 19.2 270 41-394 63-344 (354)
301 3e5z_A Putative gluconolactona 99.1 1.3E-08 4.5E-13 102.4 24.0 253 43-412 28-287 (296)
302 3i2n_A WD repeat-containing pr 99.1 4.4E-09 1.5E-13 108.7 21.0 275 15-410 43-352 (357)
303 4aez_A CDC20, WD repeat-contai 99.1 8E-09 2.7E-13 109.1 23.1 262 14-412 111-381 (401)
304 4e54_B DNA damage-binding prot 99.1 2.5E-08 8.7E-13 106.5 26.8 258 14-392 140-416 (435)
305 3dw8_B Serine/threonine-protei 99.1 9.3E-09 3.2E-13 110.1 23.0 175 142-373 179-380 (447)
306 2ha2_A ACHE, acetylcholinester 99.1 1E-10 3.4E-15 127.6 7.5 132 459-595 93-232 (543)
307 3frx_A Guanine nucleotide-bind 99.1 1.6E-08 5.6E-13 103.0 23.4 233 41-395 16-256 (319)
308 3mkq_A Coatomer beta'-subunit; 99.1 2.2E-09 7.6E-14 124.7 18.1 243 15-391 34-285 (814)
309 2ynn_A Coatomer subunit beta'; 99.0 1.7E-08 5.7E-13 102.2 22.0 222 43-392 14-244 (304)
310 3sfz_A APAF-1, apoptotic pepti 99.0 9.8E-10 3.3E-14 134.1 15.3 273 43-394 962-1236(1249)
311 1llf_A Lipase 3; candida cylin 99.0 3.2E-10 1.1E-14 123.0 9.7 131 459-594 94-243 (534)
312 4g56_B MGC81050 protein; prote 99.0 1.9E-09 6.5E-14 111.9 15.0 206 42-372 139-350 (357)
313 2xzm_R RACK1; ribosome, transl 99.0 1.7E-08 5.8E-13 104.0 22.2 229 41-394 75-327 (343)
314 2fj0_A JuvenIle hormone estera 99.0 6.4E-11 2.2E-15 129.2 3.8 130 459-594 87-232 (551)
315 2aq5_A Coronin-1A; WD40 repeat 99.0 8.8E-09 3E-13 108.8 20.2 183 162-412 104-300 (402)
316 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.1E-08 3.8E-13 106.5 20.7 218 45-365 85-342 (365)
317 1yfq_A Cell cycle arrest prote 99.0 1.3E-08 4.5E-13 104.5 21.0 239 43-412 12-283 (342)
318 1erj_A Transcriptional repress 99.0 2.3E-08 7.8E-13 105.3 23.2 213 45-374 126-349 (393)
319 3ei3_B DNA damage-binding prot 99.0 1.8E-08 6.2E-13 105.5 22.4 206 43-369 74-285 (383)
320 3frx_A Guanine nucleotide-bind 99.0 1.7E-08 5.9E-13 102.8 21.5 255 13-395 37-305 (319)
321 3jrp_A Fusion protein of prote 99.0 2.6E-08 9E-13 103.7 23.4 235 43-396 12-276 (379)
322 3g4e_A Regucalcin; six bladed 99.0 7.6E-08 2.6E-12 96.9 25.8 242 45-399 15-264 (297)
323 1vyh_C Platelet-activating fac 99.0 6.9E-09 2.4E-13 109.9 18.9 265 41-392 107-396 (410)
324 3icv_A Lipase B, CALB; circula 99.0 1.2E-09 4.1E-14 108.4 12.0 118 464-596 49-170 (316)
325 3dwl_C Actin-related protein 2 99.0 1.5E-09 5.2E-14 113.4 13.6 198 14-305 31-239 (377)
326 1k8k_C P40, ARP2/3 complex 41 99.0 2.9E-08 1E-12 103.2 23.4 240 14-364 28-274 (372)
327 2dg1_A DRP35, lactonase; beta 99.0 9.3E-08 3.2E-12 97.9 26.8 260 43-410 45-315 (333)
328 1sq9_A Antiviral protein SKI8; 99.0 2E-08 6.8E-13 105.6 22.3 254 14-374 34-330 (397)
329 4aez_A CDC20, WD repeat-contai 99.0 4.5E-08 1.5E-12 103.3 24.6 237 47-411 98-336 (401)
330 2bce_A Cholesterol esterase; h 99.0 1.2E-10 4.2E-15 127.1 4.8 131 459-594 77-222 (579)
331 3dr2_A Exported gluconolactona 99.0 7.2E-08 2.5E-12 97.5 25.0 253 43-408 45-303 (305)
332 1p0i_A Cholinesterase; serine 99.0 5.3E-10 1.8E-14 121.5 9.7 131 459-595 89-227 (529)
333 1pgu_A Actin interacting prote 99.0 1.6E-08 5.5E-13 113.1 21.2 241 43-412 19-284 (615)
334 2ynn_A Coatomer subunit beta'; 99.0 2.5E-08 8.6E-13 100.8 20.5 244 12-390 31-284 (304)
335 3dm0_A Maltose-binding peripla 99.0 3.2E-08 1.1E-12 112.6 23.6 231 12-371 401-637 (694)
336 2cb9_A Fengycin synthetase; th 99.0 1.3E-09 4.4E-14 106.4 10.2 192 480-713 21-225 (244)
337 4e54_B DNA damage-binding prot 99.0 7.8E-08 2.7E-12 102.7 25.1 206 43-370 120-331 (435)
338 1ex9_A Lactonizing lipase; alp 99.0 1.2E-09 4.2E-14 109.0 10.1 102 479-595 5-109 (285)
339 1ea5_A ACHE, acetylcholinester 99.0 6.5E-10 2.2E-14 120.9 8.7 131 459-595 91-229 (537)
340 1jmk_C SRFTE, surfactin synthe 99.0 8.1E-10 2.8E-14 106.8 8.5 200 481-712 17-228 (230)
341 1bu8_A Protein (pancreatic lip 99.0 4.1E-10 1.4E-14 119.4 6.5 113 478-595 67-181 (452)
342 2pm7_B Protein transport prote 99.0 1.2E-07 4.1E-12 95.4 24.4 236 43-395 10-273 (297)
343 1nir_A Nitrite reductase; hemo 99.0 7.5E-08 2.6E-12 105.5 24.4 236 49-411 144-402 (543)
344 2ghs_A AGR_C_1268P; regucalcin 99.0 1.6E-07 5.4E-12 95.9 25.0 236 45-399 51-294 (326)
345 3sfz_A APAF-1, apoptotic pepti 99.0 3.7E-08 1.3E-12 120.1 23.9 241 41-395 614-859 (1249)
346 1ys1_X Lipase; CIS peptide Leu 98.9 2.1E-09 7E-14 108.8 10.5 105 479-595 6-114 (320)
347 2xyi_A Probable histone-bindin 98.9 6.1E-08 2.1E-12 103.3 22.4 168 162-396 204-398 (430)
348 1w52_X Pancreatic lipase relat 98.9 6.6E-10 2.2E-14 117.8 6.8 113 478-595 67-181 (452)
349 1vyh_C Platelet-activating fac 98.9 7.4E-09 2.5E-13 109.7 14.9 263 14-361 128-408 (410)
350 1dx4_A ACHE, acetylcholinester 98.9 2.2E-09 7.5E-14 117.9 10.7 118 478-595 138-267 (585)
351 3k26_A Polycomb protein EED; W 98.9 1.2E-07 4.2E-12 98.1 23.5 152 43-281 19-182 (366)
352 2x5x_A PHB depolymerase PHAZ7; 98.9 2.3E-09 7.8E-14 108.7 9.9 121 466-596 29-166 (342)
353 3fm0_A Protein CIAO1; WDR39,SG 98.9 9.7E-08 3.3E-12 98.4 22.4 226 42-363 105-334 (345)
354 4aow_A Guanine nucleotide-bind 98.9 1.6E-07 5.5E-12 96.2 23.9 290 38-412 34-338 (340)
355 1got_B GT-beta; complex (GTP-b 98.9 9.3E-09 3.2E-13 105.9 14.5 234 43-360 98-339 (340)
356 3bix_A Neuroligin-1, neuroligi 98.9 7.4E-10 2.5E-14 121.4 6.2 128 459-593 108-247 (574)
357 4gga_A P55CDC, cell division c 98.9 6.3E-07 2.1E-11 95.1 28.2 245 45-412 108-354 (420)
358 2oiz_A Aromatic amine dehydrog 98.9 4.5E-07 1.5E-11 93.9 26.0 121 266-412 205-335 (361)
359 2pbi_B Guanine nucleotide-bind 98.9 7E-08 2.4E-12 99.9 19.8 192 41-360 153-353 (354)
360 3c75_H MADH, methylamine dehyd 98.9 4.4E-07 1.5E-11 94.9 25.7 261 47-413 122-404 (426)
361 1pgu_A Actin interacting prote 98.9 2.4E-07 8.1E-12 103.5 25.5 266 17-410 40-327 (615)
362 3tej_A Enterobactin synthase c 98.9 3.2E-09 1.1E-13 108.6 9.3 210 480-710 100-327 (329)
363 3dm0_A Maltose-binding peripla 98.9 1.4E-07 4.8E-12 107.3 23.7 242 41-412 381-633 (694)
364 2xzm_R RACK1; ribosome, transl 98.9 1.7E-07 5.9E-12 96.4 22.2 232 15-363 97-339 (343)
365 2j04_A TAU60, YPL007P, hypothe 98.9 2.3E-08 7.8E-13 106.8 15.5 194 43-363 86-296 (588)
366 3lrv_A PRE-mRNA-splicing facto 98.9 2E-06 6.8E-11 88.4 30.0 144 162-370 149-298 (343)
367 1yfq_A Cell cycle arrest prote 98.9 1.9E-07 6.5E-12 95.7 21.8 263 14-397 31-313 (342)
368 2hfk_A Pikromycin, type I poly 98.9 5.6E-09 1.9E-13 106.4 9.8 211 483-713 91-311 (319)
369 4ery_A WD repeat-containing pr 98.8 3.6E-08 1.2E-12 100.0 15.7 237 43-362 66-310 (312)
370 1sq9_A Antiviral protein SKI8; 98.8 4.9E-07 1.7E-11 94.9 24.7 249 43-412 17-323 (397)
371 3f3f_A Nucleoporin SEH1; struc 98.8 4.2E-07 1.4E-11 93.0 23.7 204 42-363 11-248 (351)
372 3mmy_A MRNA export factor; mRN 98.8 4.9E-07 1.7E-11 93.5 24.2 115 40-231 37-158 (368)
373 3jrp_A Fusion protein of prote 98.8 1.5E-07 5.2E-12 97.9 20.3 205 42-364 55-287 (379)
374 3i2n_A WD repeat-containing pr 98.8 1.5E-07 5.2E-12 97.0 20.1 240 43-412 19-292 (357)
375 4a11_B DNA excision repair pro 98.8 4.3E-06 1.5E-10 87.7 31.5 261 41-412 98-366 (408)
376 1hpl_A Lipase; hydrolase(carbo 98.8 2.9E-09 9.8E-14 112.2 6.6 113 478-595 66-180 (449)
377 3n2z_B Lysosomal Pro-X carboxy 98.8 1.8E-08 6.1E-13 105.8 11.9 111 479-594 37-160 (446)
378 3jro_A Fusion protein of prote 98.8 1.7E-07 5.9E-12 107.4 21.1 232 42-394 9-272 (753)
379 2zyr_A Lipase, putative; fatty 98.8 5.1E-09 1.7E-13 109.6 7.4 111 479-596 20-167 (484)
380 2xyi_A Probable histone-bindin 98.8 1.7E-07 5.8E-12 99.9 19.3 150 162-363 254-409 (430)
381 3bg1_A Protein SEC13 homolog; 98.8 4E-07 1.4E-11 92.5 21.2 231 42-395 13-281 (316)
382 3odt_A Protein DOA1; ubiquitin 98.8 3.4E-07 1.2E-11 92.4 20.4 270 43-412 19-297 (313)
383 1rp1_A Pancreatic lipase relat 98.8 4E-09 1.4E-13 111.1 6.1 112 478-595 67-180 (450)
384 3sjl_D Methylamine dehydrogena 98.8 1.6E-06 5.4E-11 89.0 25.0 128 265-413 230-365 (386)
385 4a11_B DNA excision repair pro 98.8 7.5E-07 2.6E-11 93.6 23.7 232 42-372 43-282 (408)
386 2pm7_B Protein transport prote 98.8 6.5E-07 2.2E-11 90.0 21.5 232 14-370 29-290 (297)
387 3dw8_B Serine/threonine-protei 98.7 6.2E-07 2.1E-11 95.7 22.1 160 42-305 177-376 (447)
388 2hes_X YDR267CP; beta-propelle 98.7 1.2E-06 4.2E-11 89.5 23.2 211 42-368 58-282 (330)
389 3vu4_A KMHSV2; beta-propeller 98.7 6E-07 2.1E-11 92.8 20.5 231 43-367 20-272 (355)
390 1qks_A Cytochrome CD1 nitrite 98.7 5.5E-06 1.9E-10 90.6 28.8 248 45-412 199-478 (567)
391 4ggc_A P55CDC, cell division c 98.7 7.1E-06 2.4E-10 82.8 27.8 244 46-412 29-274 (318)
392 2oaj_A Protein SNI1; WD40 repe 98.7 9.4E-07 3.2E-11 103.1 22.4 215 43-371 18-247 (902)
393 4gga_A P55CDC, cell division c 98.7 3.7E-06 1.3E-10 89.1 24.3 247 16-393 125-381 (420)
394 3k26_A Polycomb protein EED; W 98.6 8.9E-07 3E-11 91.5 18.9 126 17-206 45-180 (366)
395 4aow_A Guanine nucleotide-bind 98.6 2.1E-06 7.1E-11 87.7 21.2 276 14-368 59-339 (340)
396 3tjm_A Fatty acid synthase; th 98.6 3.2E-08 1.1E-12 98.9 7.2 97 479-595 22-124 (283)
397 3bg1_A Protein SEC13 homolog; 98.6 1.8E-06 6.1E-11 87.6 20.1 237 13-372 32-300 (316)
398 1qks_A Cytochrome CD1 nitrite 98.6 2.8E-06 9.6E-11 92.9 22.6 240 46-411 157-421 (567)
399 1npe_A Nidogen, entactin; glyc 98.6 7.7E-06 2.6E-10 80.6 23.7 180 162-412 58-239 (267)
400 3hrp_A Uncharacterized protein 98.6 9.7E-06 3.3E-10 85.3 25.6 221 42-375 130-363 (409)
401 3f3f_A Nucleoporin SEH1; struc 98.6 2.4E-06 8.2E-11 87.3 19.1 91 14-115 31-131 (351)
402 2hes_X YDR267CP; beta-propelle 98.6 1.2E-05 4.2E-10 81.9 24.3 200 43-364 15-230 (330)
403 3iz6_a 40S ribosomal protein R 98.6 5.2E-06 1.8E-10 86.6 21.9 204 40-362 155-373 (380)
404 3jro_A Fusion protein of prote 98.6 1.8E-06 6.2E-11 98.9 19.8 229 14-366 29-285 (753)
405 3dsm_A Uncharacterized protein 98.6 6.4E-06 2.2E-10 84.0 21.8 287 1-410 4-301 (328)
406 2mad_H Methylamine dehydrogena 98.6 2.9E-05 1E-09 80.4 27.0 255 49-413 27-309 (373)
407 1mda_H Methylamine dehydrogena 98.5 2.9E-06 9.9E-11 87.1 19.0 258 47-413 69-348 (368)
408 4gq1_A NUP37; propeller, trans 98.5 2.3E-06 8E-11 89.8 18.7 197 162-395 166-378 (393)
409 1npe_A Nidogen, entactin; glyc 98.5 2.4E-05 8.3E-10 77.0 24.6 232 16-372 10-244 (267)
410 3gre_A Serine/threonine-protei 98.5 4.9E-06 1.7E-10 88.6 21.0 231 43-372 112-365 (437)
411 3v7d_B Cell division control p 98.5 1.2E-05 4E-10 86.3 23.4 157 190-397 275-452 (464)
412 2dst_A Hypothetical protein TT 98.5 1.1E-07 3.8E-12 82.5 6.0 82 481-583 22-103 (131)
413 3mmy_A MRNA export factor; mRN 98.5 2.2E-06 7.6E-11 88.4 17.0 85 14-118 62-151 (368)
414 3gre_A Serine/threonine-protei 98.5 1.1E-05 3.7E-10 85.9 22.3 207 42-373 63-299 (437)
415 2hih_A Lipase 46 kDa form; A1 98.5 4.7E-07 1.6E-11 94.5 11.0 108 479-595 50-212 (431)
416 2j04_B YDR362CP, TAU91; beta p 98.5 1.5E-06 5.1E-11 94.5 15.1 302 14-389 181-496 (524)
417 3dsm_A Uncharacterized protein 98.5 1.5E-05 5.1E-10 81.2 21.3 217 43-370 84-305 (328)
418 2dg1_A DRP35, lactonase; beta 98.4 6.1E-06 2.1E-10 84.2 18.3 144 162-365 66-212 (333)
419 4gq1_A NUP37; propeller, trans 98.4 6.2E-06 2.1E-10 86.5 18.6 86 17-115 112-205 (393)
420 2j04_B YDR362CP, TAU91; beta p 98.4 6.7E-06 2.3E-10 89.3 18.6 160 162-392 235-413 (524)
421 2dsn_A Thermostable lipase; T1 98.4 1.1E-06 3.8E-11 90.2 11.3 103 480-595 5-164 (387)
422 3lrv_A PRE-mRNA-splicing facto 98.4 3.9E-05 1.3E-09 78.6 23.0 143 43-280 126-280 (343)
423 2ghs_A AGR_C_1268P; regucalcin 98.4 9.8E-06 3.3E-10 82.5 18.2 136 162-367 71-213 (326)
424 3sjl_D Methylamine dehydrogena 98.4 3.8E-05 1.3E-09 78.7 22.4 121 48-231 38-167 (386)
425 2ece_A 462AA long hypothetical 98.4 0.00016 5.5E-09 74.7 26.9 219 161-412 163-426 (462)
426 2oaj_A Protein SNI1; WD40 repe 98.4 8.3E-06 2.9E-10 95.1 19.8 202 100-411 21-242 (902)
427 3vu4_A KMHSV2; beta-propeller 98.4 2.3E-05 7.9E-10 80.8 21.1 189 44-304 60-273 (355)
428 2ece_A 462AA long hypothetical 98.4 3.6E-05 1.2E-09 79.5 21.8 85 262-367 322-428 (462)
429 3c75_H MADH, methylamine dehyd 98.4 3.3E-05 1.1E-09 80.7 22.0 251 51-413 81-361 (426)
430 3e5z_A Putative gluconolactona 98.4 3.3E-05 1.1E-09 77.2 21.6 216 43-371 69-291 (296)
431 4ggc_A P55CDC, cell division c 98.4 0.00011 3.9E-09 73.8 25.2 249 16-393 45-301 (318)
432 3odt_A Protein DOA1; ubiquitin 98.3 2E-06 6.7E-11 86.7 11.6 259 14-369 37-299 (313)
433 2oiz_A Aromatic amine dehydrog 98.3 2.2E-05 7.5E-10 81.1 19.5 99 265-389 258-360 (361)
434 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 0.00012 4.1E-09 73.6 24.5 264 43-410 18-298 (314)
435 2oit_A Nucleoporin 214KDA; NH2 98.3 5.1E-05 1.8E-09 80.5 22.5 101 162-303 172-279 (434)
436 3g4e_A Regucalcin; six bladed 98.3 1.8E-05 6.1E-10 79.3 17.8 201 100-412 16-230 (297)
437 3v65_B Low-density lipoprotein 98.3 0.00016 5.6E-09 75.2 25.0 178 162-409 138-316 (386)
438 3v64_C Agrin; beta propeller, 98.3 0.00052 1.8E-08 70.2 27.8 178 162-409 95-273 (349)
439 1ijq_A LDL receptor, low-densi 98.3 0.00025 8.7E-09 71.5 25.0 230 56-412 3-239 (316)
440 1fwx_A Nitrous oxide reductase 98.2 4.2E-05 1.4E-09 81.9 18.2 115 43-197 85-208 (595)
441 1rwi_B Serine/threonine-protei 98.2 0.00021 7.1E-09 70.1 22.0 237 44-410 25-263 (270)
442 3v64_C Agrin; beta propeller, 98.2 0.0002 6.7E-09 73.4 22.4 162 43-304 73-236 (349)
443 3sov_A LRP-6, low-density lipo 98.2 0.00029 9.9E-09 71.0 23.2 185 15-305 12-200 (318)
444 3v65_B Low-density lipoprotein 98.2 0.00011 3.8E-09 76.4 20.7 161 43-304 116-279 (386)
445 2p4o_A Hypothetical protein; p 98.2 0.00078 2.7E-08 67.5 26.0 228 45-397 34-278 (306)
446 2iwa_A Glutamine cyclotransfer 98.1 0.00016 5.5E-09 70.0 19.3 179 162-412 44-238 (266)
447 2oit_A Nucleoporin 214KDA; NH2 98.1 4.3E-05 1.5E-09 81.1 16.7 94 162-301 118-222 (434)
448 3fvz_A Peptidyl-glycine alpha- 98.1 0.00071 2.4E-08 68.6 25.3 116 263-411 198-322 (329)
449 3p5b_L Low density lipoprotein 98.1 0.00065 2.2E-08 70.9 25.0 182 162-412 134-321 (400)
450 2w18_A PALB2, fancn, partner a 98.1 0.00031 1E-08 70.3 21.1 43 160-206 201-245 (356)
451 1ijq_A LDL receptor, low-densi 98.1 0.00052 1.8E-08 69.2 22.5 181 17-304 11-197 (316)
452 3dr2_A Exported gluconolactona 98.1 5.4E-05 1.9E-09 76.1 15.0 174 171-411 34-224 (305)
453 2qe8_A Uncharacterized protein 98.1 0.002 6.9E-08 65.7 27.0 111 263-396 197-309 (343)
454 3p5b_L Low density lipoprotein 98.1 0.00029 9.9E-09 73.6 20.9 164 42-305 111-280 (400)
455 2iwa_A Glutamine cyclotransfer 98.0 0.00025 8.7E-09 68.6 18.4 206 46-367 24-238 (266)
456 3v7d_B Cell division control p 98.0 0.00019 6.5E-09 76.7 18.9 106 267-410 275-380 (464)
457 3hrp_A Uncharacterized protein 98.0 0.00038 1.3E-08 73.0 19.9 158 48-304 176-356 (409)
458 3sov_A LRP-6, low-density lipo 97.9 0.0013 4.4E-08 66.2 22.6 180 162-412 57-239 (318)
459 2w18_A PALB2, fancn, partner a 97.9 0.00055 1.9E-08 68.4 19.2 41 224-281 305-347 (356)
460 3no2_A Uncharacterized protein 97.9 0.0013 4.5E-08 64.7 21.9 180 68-372 15-201 (276)
461 4ebb_A Dipeptidyl peptidase 2; 97.9 5.1E-05 1.8E-09 80.7 12.2 113 479-595 41-163 (472)
462 1n7d_A LDL receptor, low-densi 97.9 9.8E-05 3.4E-09 83.1 15.1 146 162-373 475-621 (699)
463 2fp8_A Strictosidine synthase; 97.9 0.00095 3.3E-08 67.4 20.5 194 163-410 102-312 (322)
464 1q7f_A NHL, brain tumor CG1071 97.9 0.0072 2.5E-07 59.5 26.3 175 162-409 100-278 (286)
465 3m0c_C LDL receptor, low-densi 97.8 0.0032 1.1E-07 71.2 25.3 182 162-412 446-633 (791)
466 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.0024 8.1E-08 67.8 23.1 69 337-410 367-441 (445)
467 3m0c_C LDL receptor, low-densi 97.8 0.0015 5.1E-08 74.0 21.8 163 43-305 424-592 (791)
468 1n7d_A LDL receptor, low-densi 97.8 0.00019 6.5E-09 80.7 14.5 182 162-412 428-615 (699)
469 3nol_A Glutamine cyclotransfer 97.8 0.0011 3.8E-08 63.3 17.4 177 162-410 65-255 (262)
470 1rwi_B Serine/threonine-protei 97.8 0.0025 8.6E-08 62.1 21.0 174 162-410 46-221 (270)
471 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0043 1.5E-07 68.6 24.7 229 15-372 14-243 (628)
472 1fwx_A Nitrous oxide reductase 97.7 0.0013 4.6E-08 70.4 18.6 102 162-302 254-361 (595)
473 3qqz_A Putative uncharacterize 97.7 0.0048 1.6E-07 59.3 20.6 210 43-366 27-253 (255)
474 3s94_A LRP-6, low-density lipo 97.6 0.0064 2.2E-07 67.1 23.8 230 15-372 17-249 (619)
475 1whs_A Serine carboxypeptidase 97.6 0.00027 9.4E-09 67.3 10.7 135 461-598 30-189 (255)
476 4a0p_A LRP6, LRP-6, low-densit 97.6 0.013 4.5E-07 64.7 25.9 180 162-413 59-239 (628)
477 2z2n_A Virginiamycin B lyase; 97.6 0.02 6.9E-07 56.3 25.2 172 162-411 120-295 (299)
478 3qqz_A Putative uncharacterize 97.6 0.011 3.8E-07 56.7 21.9 205 99-409 29-251 (255)
479 1mda_H Methylamine dehydrogena 97.6 0.003 1E-07 64.6 18.9 103 53-205 30-141 (368)
480 1ivy_A Human protective protei 97.5 0.00036 1.2E-08 73.3 10.9 126 462-597 31-183 (452)
481 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.011 3.8E-07 58.9 20.5 160 44-303 118-300 (314)
482 2px6_A Thioesterase domain; th 97.4 0.00052 1.8E-08 69.2 10.0 96 479-594 44-145 (316)
483 1p22_A F-BOX/WD-repeat protein 97.4 0.0091 3.1E-07 63.0 20.2 170 162-412 193-366 (435)
484 2z2n_A Virginiamycin B lyase; 97.4 0.037 1.3E-06 54.4 23.5 235 43-409 15-253 (299)
485 3s94_A LRP-6, low-density lipo 97.4 0.065 2.2E-06 59.1 27.2 208 43-373 349-558 (619)
486 3nol_A Glutamine cyclotransfer 97.3 0.013 4.4E-07 56.0 17.7 201 47-364 47-254 (262)
487 1q7f_A NHL, brain tumor CG1071 97.3 0.0098 3.4E-07 58.5 17.8 94 162-301 142-237 (286)
488 3fvz_A Peptidyl-glycine alpha- 97.2 0.016 5.4E-07 58.5 18.8 145 162-365 166-321 (329)
489 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.012 4.2E-07 62.1 18.8 169 162-412 179-349 (445)
490 2qc5_A Streptogramin B lactona 97.2 0.08 2.7E-06 51.9 23.7 235 43-409 20-258 (300)
491 4hw6_A Hypothetical protein, I 97.2 0.097 3.3E-06 54.9 24.7 158 43-302 139-304 (433)
492 3mbr_X Glutamine cyclotransfer 97.1 0.04 1.4E-06 52.1 19.0 177 161-410 42-234 (243)
493 2ism_A Putative oxidoreductase 97.1 0.12 4E-06 52.6 23.9 65 41-115 29-96 (352)
494 2qe8_A Uncharacterized protein 97.1 0.016 5.5E-07 58.9 17.1 69 42-114 66-137 (343)
495 2qc5_A Streptogramin B lactona 97.0 0.12 3.9E-06 50.8 22.9 170 162-409 125-298 (300)
496 1p22_A F-BOX/WD-repeat protein 97.0 0.021 7.2E-07 60.1 18.3 90 162-304 233-327 (435)
497 3no2_A Uncharacterized protein 97.0 0.023 7.9E-07 55.7 16.8 183 160-413 13-197 (276)
498 3nok_A Glutaminyl cyclase; bet 97.0 0.027 9.1E-07 53.8 16.3 175 162-409 75-264 (268)
499 3tc9_A Hypothetical hydrolase; 97.0 0.019 6.6E-07 60.3 17.1 160 42-302 136-301 (430)
500 1tib_A Lipase; hydrolase(carbo 96.8 0.0032 1.1E-07 61.4 8.9 112 463-596 61-177 (269)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=2.2e-54 Score=498.18 Aligned_cols=588 Identities=15% Similarity=0.194 Sum_probs=413.5
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCc----
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ---- 87 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---- 87 (715)
.....+|++|+.++. ..+|+..+ +.+..|+|||||++|||+++. .+|.+. .+|+.++++....
T Consensus 89 ~~~~~~~~~d~~~~~--~~~l~~~~-----~~~~~~~~SPdG~~la~~~~~-----~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQ--LITEERIP-----NNTQWVTWSPVGHKLAYVWNN-----DIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp CEEEEEEEEETTTTE--ECCSSCCC-----TTEEEEEECSSTTCEEEEETT-----EEEEESSTTSCCEECCSCCBTTTE
T ss_pred ccceEEEEEECCCCc--EEEcccCC-----CcceeeEECCCCCEEEEEECC-----eEEEEECCCCceEEEcCCCCccce
Confidence 344788998887664 45555544 678999999999999999654 588777 6777777664211
Q ss_pred --cccccccCCC---cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCc
Q 005093 88 --TVHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 162 (715)
Q Consensus 88 --~~~~~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (715)
+..++||.++ ....+.|||||++|||.+.+... ...+......... ........+.|.+. |.. ....
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~-v~~~~~~~~~~~~---~~~~~~~~~~yp~~-G~~---~~~~ 228 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE-VPLIEYSFYSDES---LQYPKTVRVPYPKA-GAV---NPTV 228 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT-CCEEEEEECCSTT---CSSCEEEEEECCBT-TSC---CCEE
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccC-CceEEEEeecCCC---CCCCcceeecCCCC-cCc---CCee
Confidence 1112222211 22468999999999998765432 1122111111000 00000112223222 221 1224
Q ss_pred eEEEEEccC---C---ceEeecCCC-----CCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 163 SLFVININS---G---EVQAVKGIP-----KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 163 ~l~~~~~~~---g---~~~~l~~~~-----~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
.|+++|+++ + +.+.+. .+ ....+..++|||||+. +++..++.. ....|+++|+
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~wspdg~~----~~~~~~r~~-----------~~~~i~~~d~ 292 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQIT-APASMLIGDHYLCDVTWATQERI----SLQWLRRIQ-----------NYSVMDICDY 292 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEEC-CCHHHHTSCEEEEEEEEEETTEE----EEEEEESST-----------TEEEEEEEEE
T ss_pred EEEEEECCCCCCCCcceEEEec-CCccCCCCCeEEEEEEEeCCCeE----EEEEeCCCC-----------CEEEEEEEEC
Confidence 799999999 8 666663 11 3345678899999998 887765432 1236999997
Q ss_pred ccccchhhhhhhhccCCCCCC-------ceec--CCCCcc-----ccceeEcCCCCeEE-EEecCCCCCCCCccccceeE
Q 005093 232 SLYKSEASELELKESSSEDLP-------VVNL--TESISS-----AFFPRFSPDGKFLV-FLSAKSSVDSGAHSATDSLH 296 (715)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-------~~~l--t~~~~~-----~~~~~~spdg~~l~-~~~~~~~~~~g~~~~~~~l~ 296 (715)
++++ ...+ ...... ...|.|||||+.|+ |.+.++ +..+||
T Consensus 293 -----------------~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~--------G~~~l~ 347 (740)
T 4a5s_A 293 -----------------DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE--------GYRHIC 347 (740)
T ss_dssp -----------------ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT--------SCEEEE
T ss_pred -----------------CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC--------CceEEE
Confidence 5665 2333 112222 34899999999998 666653 357899
Q ss_pred eeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee----CCeeEEEEEECCCCcEE-E
Q 005093 297 RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW----GSSQVIISVNVSSGELL-R 371 (715)
Q Consensus 297 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~----~~~~~l~~~d~~tg~~~-~ 371 (715)
+++++++..++||.+..++..+ +.+|++.|+|++.. .+..+||+++++++..+ +
T Consensus 348 ~~~~~~~~~~~lT~g~~~v~~~---------------------~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~ 406 (740)
T 4a5s_A 348 YFQIDKKDCTFITKGTWEVIGI---------------------EALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTC 406 (740)
T ss_dssp EEETTCSSCEESCCSSSCEEEE---------------------EEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEE
T ss_pred EEECCCCceEecccCCEEEEEE---------------------EEEeCCEEEEEEecCCCCCceeEEEEEECCCCCccee
Confidence 9999998888888765443321 23457889998876 45689999999877665 6
Q ss_pred ecCC----CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeee
Q 005093 372 ITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMK 447 (715)
Q Consensus 372 l~~~----~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 447 (715)
|+.. ...+....||++++.+++.++++. |+.+++.+..+++ ... +...|+.+...+....+...+
T Consensus 407 lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~---~~~-------~l~~n~~~~~~~~~~~~~~~~ 475 (740)
T 4a5s_A 407 LSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDK---GLR-------VLEDNSALDKMLQNVQMPSKK 475 (740)
T ss_dssp SSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTE---EEE-------EEECCHHHHHHHTTEECCEEE
T ss_pred eccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCc---EEE-------EeccChhhhhhhhhccCCccE
Confidence 7643 123455789999999999999887 8889998876443 110 113344333333322221111
Q ss_pred cccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cccch-HHHHHHH-hCCcEEEEEcCCCCCCC
Q 005093 448 IPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KSLAFLS-SVGYSLLIVNYRGSLGF 524 (715)
Q Consensus 448 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~-~~~~~la-~~G~~vi~~d~rG~~~~ 524 (715)
..++ ..+|.++.++++.|+++++.+++|+||++|||++... ...|. .....++ ++||+|+++|+||++++
T Consensus 476 ------~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~ 548 (740)
T 4a5s_A 476 ------LDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQ 548 (740)
T ss_dssp ------EEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred ------EEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcC
Confidence 1123 4578999999999998877889999999999887642 12222 2334555 59999999999999999
Q ss_pred chhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC
Q 005093 525 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 604 (715)
Q Consensus 525 g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~ 604 (715)
|..+.......++...++|+.+++++|.+++.+|++||+|+||||||++++.++.++|++|+++|+.+|+.++..+..
T Consensus 549 g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-- 626 (740)
T 4a5s_A 549 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS-- 626 (740)
T ss_dssp CHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH--
T ss_pred ChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhh--
Confidence 998888777888888899999999999988888999999999999999999999999999999999999987653211
Q ss_pred CCCCceeeeccCCCCCCCCCCCC-ChhhHHHHHhcCchhhccCCCC-cEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE
Q 005093 605 DIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDLRVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
.+.+ .+++.+ .....+.+...+|+..+.++++ |+|++||+.|.+||+.++.+++++|++++++++
T Consensus 627 -----~~~~--------~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~ 693 (740)
T 4a5s_A 627 -----VYTE--------RYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQ 693 (740)
T ss_dssp -----HHHH--------HHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCE
T ss_pred -----HHHH--------HHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeE
Confidence 0001 111112 2345677888899999999986 999999999999999999999999999999999
Q ss_pred EEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 683 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 683 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
++++|+++|.+...+....+++.+.+||+++|+
T Consensus 694 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 694 AMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp EEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 999999999986666677899999999999874
No 2
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=3.9e-52 Score=474.85 Aligned_cols=571 Identities=19% Similarity=0.255 Sum_probs=410.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCcc-----ccccceEEeeC--CCCce-EEEEecCCCCCCeEEEEe-c--C-CccEEE
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPV-----EMTGASAVVPS--PSGSK-LLVVRNPENESPIQFELW-S--Q-SQLEKE 82 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~S--pdg~~-la~~~~~~~~~~~~~~~~-~--~-~~~~~~ 82 (715)
...||.+ . .+....+||..+... +.+ ...+.|| |||++ |||.... ..++|.+. . + ++..++
T Consensus 48 ~~~l~~~--~-~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~SPDg~~~la~~~~~---~~~l~~~~~~~~g~~~~~~l 120 (662)
T 3azo_A 48 RATLVRR--R-ADGAEESALPAPWNVRNRVFEYS-GFPWAGVPRPAGGPLLVFTHFG---DQRLYAFEPDAPGGAVPRPL 120 (662)
T ss_dssp EEEEEEE--C-TTSCEEESSCTTCCBCCCGGGTC-CCCEEEECCSSSSCEEEEEBTT---TCCEEEECTTSTTCCCCEEC
T ss_pred cEEEEEE--C-CCCCcceeCCCCccccccccccC-CccceeeeecCCCeEEEEEECC---CCeEEEEcCCCCCCCCCEec
Confidence 5678874 2 234566776654211 001 1145565 99999 9998654 34688887 4 3 677666
Q ss_pred EecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCc
Q 005093 83 FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 162 (715)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (715)
+......+. .....++|||||++|+|.+.+.... +. .....
T Consensus 121 ~~~~~~~~~-----~~~~~~~~spDg~~l~~~~~~~~~~-------------------------------~~---~~~~~ 161 (662)
T 3azo_A 121 TPVSAVGGG-----LRWADPVLLPERGEVWCMAEEFTGE-------------------------------GP---SDVRR 161 (662)
T ss_dssp SCCCCSTTC-----EEEEEEEEETTTTEEEEEEEEECSS-------------------------------ST---TCEEE
T ss_pred cCCccCCCC-----ccccCcEECCCCCEEEEEEecccCC-------------------------------CC---CCcee
Confidence 653211110 1226899999999999987642110 00 01347
Q ss_pred eEEEEEccC------CceEeecCC-CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccccc
Q 005093 163 SLFVININS------GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYK 235 (715)
Q Consensus 163 ~l~~~~~~~------g~~~~l~~~-~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 235 (715)
+|+++|+++ ++.+.+ + ........++|||||+. |+|.++.... ..+ ...+||++|+
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~SpDG~~----la~~~~~~~~----~~~---~~~~i~~~d~---- 224 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVREL--SDDAHRFVTGPRLSPDGRQ----AVWLAWDHPR----MPW---EGTELKTARV---- 224 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEES--SCSCSSEECCCEECTTSSE----EEEEEECTTC----CTT---TCEEEEEEEE----
T ss_pred EEEEEECCCCccccCCceeEE--EecCCCcccCceECCCCCE----EEEEECCCCC----CCC---CCcEEEEEEE----
Confidence 899999999 888888 5 44456678899999999 9998754321 000 2247999998
Q ss_pred chhhhhhhhccCCC-CC---CceecCCC-CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccc
Q 005093 236 SEASELELKESSSE-DL---PVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 310 (715)
Q Consensus 236 ~~~~~~~~~~~~~~-~~---~~~~lt~~-~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~ 310 (715)
+ ++ +.++++.. ......|.|||||+ |+|.+..+ +..+||++|+.+++.+.++.
T Consensus 225 -------------~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~--------~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 225 -------------TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT--------GWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp -------------CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT--------SSCEEEEECTTTCCEEESSC
T ss_pred -------------CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC--------CCeEEEEEECCCCceeeccc
Confidence 5 45 66677654 46688899999999 88888764 23579999987766655543
Q ss_pred ceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEE-eecCC
Q 005093 311 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLL-TLDGD 389 (715)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~-s~~~~ 389 (715)
..... ..+ .|..+...+.|++|++ ++++... +..+||.+|+++++.++++.... ....+ +++++
T Consensus 283 ~~~~~----------~~p-~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~--~~~~~~s~~~~ 347 (662)
T 3azo_A 283 REEEF----------AGP-LWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPESGELVDAAGPWT--EWAATLTVSGT 347 (662)
T ss_dssp CSSBS----------SCC-CCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETTTTEEEECCSSCC--EEEEEEEEETT
T ss_pred ccccc----------cCc-cccccCceEeEeCCCE-EEEEEEc-CccEEEEEECCCCcEEEecCCCC--eEEEEEecCCC
Confidence 22110 001 1322344566778887 6666666 88899999999999888876655 33455 88999
Q ss_pred EEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhcccccee-eeecccccccccccCCCCceEEEE
Q 005093 390 NIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS-IMKIPVKGVSANLTKGAQKPFEAI 468 (715)
Q Consensus 390 ~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~ 468 (715)
.+++++.+.+.|.+||++++.+++ ... ++..+. ..+....+. .. .+.+...+|..++++
T Consensus 348 ~~~~~~~~~~~~~~i~~~d~~~g~-~~~---------l~~~~~---~~~~~~~~~~~~-------~~~~~~~dg~~i~~~ 407 (662)
T 3azo_A 348 RAVGVAASPRTAYEVVELDTVTGR-ART---------IGARHT---DPVDPAYYPEPQ-------IRTFTAPDGREIHAH 407 (662)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCC-EEE---------EESCCC---CSSCGGGSCCCE-------EEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCCCEEEEEECCCCc-eEE---------eecCCc---ccCCccccCcce-------EEEEEcCCCCEEEEE
Confidence 999999999999999999976553 111 111111 001111110 11 123455678999999
Q ss_pred EEecCCCC----CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhH
Q 005093 469 FVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDV 544 (715)
Q Consensus 469 l~~P~~~~----~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~ 544 (715)
++.|++.+ ..+++|+||++||++.......|...++.|+++||.|+++|+||++++|.++.......++..+++|+
T Consensus 408 ~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~ 487 (662)
T 3azo_A 408 IYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDC 487 (662)
T ss_dssp EECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHH
T ss_pred EECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHH
Confidence 99998754 45789999999999877655678888899999999999999999999999998776677777779999
Q ss_pred HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-CCCCCCceeeeccCCCCCCCC
Q 005093 545 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTDIPDWCYVESYGSKGKDSF 623 (715)
Q Consensus 545 ~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 623 (715)
.++++++++++.+|.++|+|+||||||++++.++.+ |++|+++|+.+|+.++..+.. ... .+ .......+
T Consensus 488 ~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~--~~------~~~~~~~~ 558 (662)
T 3azo_A 488 AAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTH--DF------ESRYLDFL 558 (662)
T ss_dssp HHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSC--GG------GTTHHHHH
T ss_pred HHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhccccc--ch------hhHhHHHH
Confidence 999999999988899999999999999999998886 999999999999988765543 111 00 00000111
Q ss_pred CCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHH
Q 005093 624 TESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESF 703 (715)
Q Consensus 624 ~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 703 (715)
.+.. .+..+.+...+|+..+.++++|+|++||++|.+||+.++.+++++|+..|++++++++++++|.+...+...+++
T Consensus 559 ~~~~-~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~ 637 (662)
T 3azo_A 559 IGSF-EEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRAL 637 (662)
T ss_dssp TCCT-TTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHH
T ss_pred hCCC-ccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHH
Confidence 1111 245567778899999999999999999999999999999999999999999999999999999987666677899
Q ss_pred HHHHHHHHHhcC
Q 005093 704 LNIGLWFKKYCK 715 (715)
Q Consensus 704 ~~i~~wl~~~l~ 715 (715)
+.+++||+++|+
T Consensus 638 ~~~~~fl~~~l~ 649 (662)
T 3azo_A 638 EAELSLYAQVFG 649 (662)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 999999999874
No 3
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=5.9e-50 Score=459.36 Aligned_cols=576 Identities=14% Similarity=0.147 Sum_probs=402.4
Q ss_pred ceEEEEEEEeecCCCCcccccc-CCCccc-cccceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEEEEecCccc
Q 005093 14 RKKFMLSTVISKENENSVTFQW-APFPVE-MTGASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTV 89 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 89 (715)
....||+++..++ +..+|+. ..+..+ ......++|||||++|||....++ +..+++.++ .+|+..+.+......
T Consensus 96 ~~~~l~~~~~~~~--~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~ 173 (710)
T 2xdw_A 96 NQRVLYVQDSLEG--EARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKF 173 (710)
T ss_dssp SSCEEEEESSTTS--CCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECS
T ss_pred eEEEEEEEcCCCC--CcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCccc
Confidence 4557888655433 3333322 122221 124678999999999999988652 223788777 677766543322122
Q ss_pred cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 90 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
..++|||||+.|+|.+........ . +.........+||++++
T Consensus 174 ----------~~~~wspDg~~l~~~~~~~~~~~~--------------~--------------~~~~~~~~~~~v~~~~l 215 (710)
T 2xdw_A 174 ----------SCMAWTHDGKGMFYNAYPQQDGKS--------------D--------------GTETSTNLHQKLYYHVL 215 (710)
T ss_dssp ----------CCEEECTTSSEEEEEECCCCSSCC--------------S--------------SSCCCCCCCCEEEEEET
T ss_pred ----------ceEEEEeCCCEEEEEEECCccccc--------------c--------------ccccccCCCCEEEEEEC
Confidence 689999999999998765421100 0 00000012378999999
Q ss_pred cCCceE--eecCCC-CCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhcc
Q 005093 170 NSGEVQ--AVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 246 (715)
Q Consensus 170 ~~g~~~--~l~~~~-~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (715)
.+++.. .+.... .......+.|||||+. |++.+..... ...+||++|+
T Consensus 216 ~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~~----------~~~~l~~~d~--------------- 266 (710)
T 2xdw_A 216 GTDQSEDILCAEFPDEPKWMGGAELSDDGRY----VLLSIREGCD----------PVNRLWYCDL--------------- 266 (710)
T ss_dssp TSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECSSS----------SCCEEEEEEG---------------
T ss_pred CCCcccceEEeccCCCCeEEEEEEEcCCCCE----EEEEEEccCC----------CccEEEEEEC---------------
Confidence 887632 221111 1223457899999999 9998743211 1358999997
Q ss_pred CCCC------C--CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC---CCcccceeee
Q 005093 247 SSED------L--PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN---FSSLEKIVDV 315 (715)
Q Consensus 247 ~~~~------~--~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~---~~lt~~~~~~ 315 (715)
.+ + ..+.|+....... ..|+|||++|+|.++.. ....+|+++|+.+++. +.++....
T Consensus 267 --~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~-------~~~~~l~~~d~~~~~~~~~~~l~~~~~-- 334 (710)
T 2xdw_A 267 --QQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH-------SPNYRLINIDFTDPEESKWKVLVPEHE-- 334 (710)
T ss_dssp --GGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT-------CTTCEEEEEETTSCCGGGCEEEECCCS--
T ss_pred --cccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC-------CCCCEEEEEeCCCCCcccceeccCCCC--
Confidence 43 3 4667776554433 46999999999998764 2356799999887542 22221110
Q ss_pred eeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc-EEEecCCCCCceeEEEeecCCEEEEE
Q 005093 316 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~~~~~l~~~ 394 (715)
.. .+..+.|+++ ..++++...++..+|+.+++.+|+ .+.+....+.+....++++++.+++.
T Consensus 335 --------~~--------~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 335 --------KD--------VLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp --------SC--------EEEEEEEETT-TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred --------CC--------eEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 00 1224567744 568888888888999999996666 56676554433334566788899999
Q ss_pred EeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCC
Q 005093 395 SSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSH 474 (715)
Q Consensus 395 ~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~ 474 (715)
.++..+|.+||++++.+++...+. +... ++..++ ...+....+ .+.+.+|.+|+++++.|++
T Consensus 398 ~ss~~~P~~i~~~d~~tg~~~~~~-l~~~--~~~~~~--------~~~~~~~~~-------~~~~~dg~~i~~~~~~p~~ 459 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEELEPRV-FREV--TVKGID--------ASDYQTVQI-------FYPSKDGTKIPMFIVHKKG 459 (710)
T ss_dssp EECSSCCCEEEEEETTSSSCCCEE-EEEC--CCTTCC--------GGGEEEEEE-------EEECTTSCEEEEEEEEETT
T ss_pred EeCCCCCCEEEEEECCCCccceEE-eeec--ccCCcC--------ccccEEEEE-------EEEcCCCCEEEEEEEecCC
Confidence 999999999999998765310111 1100 111111 111222222 4556689999999999997
Q ss_pred CCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHH
Q 005093 475 KKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID 553 (715)
Q Consensus 475 ~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 553 (715)
....++.|+||++|||+.......|......|++ +||+|+++|+||++++|..|.......+....++|+.+++++|++
T Consensus 460 ~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 539 (710)
T 2xdw_A 460 IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIK 539 (710)
T ss_dssp CCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHH
Confidence 7667789999999998877666667766667777 999999999999999999987765555566678999999999999
Q ss_pred cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHH
Q 005093 554 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 633 (715)
Q Consensus 554 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (715)
++.+++++|+|+|+|+||++++.++.++|++|+++|+.+|+.++...........| ...++. ....+..+
T Consensus 540 ~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~g~--------~~~~~~~~ 609 (710)
T 2xdw_A 540 EGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW--TTDYGC--------SDSKQHFE 609 (710)
T ss_dssp TTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HHHHCC--------TTSHHHHH
T ss_pred cCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhH--HHhCCC--------CCCHHHHH
Confidence 98889999999999999999999999999999999999999887654332211111 111111 12234566
Q ss_pred HHHhcCchhhcc-----CCCC-cEEEEeeCCCCcCCchHHHHHHHHHHHc-------CCcEEEEEeCCCCccCCCCC-ch
Q 005093 634 RFHSKSPISHIS-----KVKT-PTIFLLGAQDLRVPVSNGLQYARALREK-------GVETKVIVFPNDVHGIERPQ-SD 699 (715)
Q Consensus 634 ~~~~~sp~~~~~-----~i~~-P~Lii~G~~D~~v~~~~~~~~~~~l~~~-------g~~~~~~~~~~~~H~~~~~~-~~ 699 (715)
.+...+|+.++. ++++ |+||+||++|.+||+.++.+++++|+.. +.++++++++++||++..+. ..
T Consensus 610 ~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 689 (710)
T 2xdw_A 610 WLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKV 689 (710)
T ss_dssp HHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHH
T ss_pred HHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHH
Confidence 777889999988 7886 9999999999999999999999999988 88999999999999987653 34
Q ss_pred HHHHHHHHHHHHHhcC
Q 005093 700 FESFLNIGLWFKKYCK 715 (715)
Q Consensus 700 ~~~~~~i~~wl~~~l~ 715 (715)
.+.+..+++||.++|+
T Consensus 690 ~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 690 IEEVSDMFAFIARCLN 705 (710)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 6788899999999874
No 4
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=2.7e-51 Score=460.29 Aligned_cols=543 Identities=17% Similarity=0.206 Sum_probs=389.5
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecC-ccccccccCCCcccceeecCCCCeEEEEeec-CCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~-~~~~~ 122 (715)
+...++||||++|||++..+ +..++|.+ .+|+.++++... ..+ ..++|||| +|+|.+.. .....
T Consensus 24 ~~~~~~~~DG~~la~~s~~~-g~~~lw~~-~~g~~~~lt~~~~~~~----------~~~~~spd--~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSE-GSVNAYLY-DGGETVKLNREPINSV----------LDPHYGVG--RVILVRDVSKGAEQ 89 (582)
T ss_dssp EEEEEEEETTTEEEEEEEET-TEEEEEEE-ETTEEEECCSSCCSEE----------CEECTTCS--EEEEEEECSTTSCC
T ss_pred hheeecCCCCCeEEEEEccC-CceeEEEE-cCCCcEeeeccccccc----------ccccCCCC--eEEEEeccCCCCcc
Confidence 67889999999999998755 55566665 666766666443 122 68999999 68887764 22111
Q ss_pred -CCccCCC--CCCCCCCcCCCCCCCCCcccCCcC-cccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCC
Q 005093 123 -PTFSLGS--TKGGSSDKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 123 -~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
..+.... .......... .......|.++.. ..+.......+.+||+++|+.+.++ .... ..++|||||+.
T Consensus 90 ~~l~~~~~~~~g~~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~--~~~~--~~~~~spDG~~- 163 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQRLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA--RLPG--FGFVSDIRGDL- 163 (582)
T ss_dssp EEEEEEETTSTTCCEECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE--EESS--CEEEEEEETTE-
T ss_pred eEEEEEeccCCCccccccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee--cCCC--ceEEECCCCCE-
Confidence 1111111 1111110000 0111234555521 2233334456779999999988883 2222 68899999999
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~ 278 (715)
|++.+...+ ....||++|+ ++++.++|+........|+|||||++|+ .
T Consensus 164 ---la~~~~~~~-----------~~~~i~~~d~-----------------~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~ 211 (582)
T 3o4h_A 164 ---IAGLGFFGG-----------GRVSLFTSNL-----------------SSGGLRVFDSGEGSFSSASISPGMKVTA-G 211 (582)
T ss_dssp ---EEEEEEEET-----------TEEEEEEEET-----------------TTCCCEEECCSSCEEEEEEECTTSCEEE-E
T ss_pred ---EEEEEEcCC-----------CCeEEEEEcC-----------------CCCCceEeecCCCccccceECCCCCEEE-E
Confidence 998874322 1136999997 7888899998888889999999999998 4
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCc--------cccCCCEEEEE
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP--------WLSDGCTMLLS 350 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~dg~~l~~~ 350 (715)
+..+ +..+||++|+.+++.+ ++..... .+..+. |+||| .++++
T Consensus 212 ~~~~--------~~~~i~~~d~~~~~~~-~~~~~~~-------------------~~~~~~~~~~~~~~~spdg-~~~~~ 262 (582)
T 3o4h_A 212 LETA--------REARLVTVDPRDGSVE-DLELPSK-------------------DFSSYRPTAITWLGYLPDG-RLAVV 262 (582)
T ss_dssp EECS--------SCEEEEEECTTTCCEE-ECCCSCS-------------------HHHHHCCSEEEEEEECTTS-CEEEE
T ss_pred ccCC--------CeeEEEEEcCCCCcEE-EccCCCc-------------------ChhhhhhccccceeEcCCC-cEEEE
Confidence 4332 2357999999887665 3221100 112234 99999 68888
Q ss_pred eeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCC
Q 005093 351 SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRC 430 (715)
Q Consensus 351 ~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (715)
...++...||.+ |+..+.. .+.+....++ ++.++++.++...|++++++++.+ + ..+ | .+
T Consensus 263 ~~~~g~~~l~~~----g~~~~~~--~~~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~~~-~-~~~---------l-~~ 322 (582)
T 3o4h_A 263 ARREGRSAVFID----GERVEAP--QGNHGRVVLW--RGKLVTSHTSLSTPPRIVSLPSGE-P-LLE---------G-GL 322 (582)
T ss_dssp EEETTEEEEEET----TEEECCC--SSEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCC-E-EEC---------C-CC
T ss_pred EEcCCcEEEEEE----CCeeccC--CCceEEEEec--CCEEEEEEcCCCCCCeEEEEcCCC-c-eEE---------E-ec
Confidence 888888888876 5555422 2323334566 456778888899999999988653 2 111 1 11
Q ss_pred chhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCC
Q 005093 431 PEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVG 510 (715)
Q Consensus 431 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G 510 (715)
++... .... .... +++...+|.+++++++.|++.. ++.|+||++||+++......|...++.|+++|
T Consensus 323 ~~~~~--~~~~--~~~~-------~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G 389 (582)
T 3o4h_A 323 PEDLR--RSIA--GSRL-------VWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAG 389 (582)
T ss_dssp CHHHH--HTEE--EEEE-------EEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHHHHHHHTT
T ss_pred CCccc--cccC--cceE-------EEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHHHHHHhCC
Confidence 11100 0111 1111 2455668899999999998643 38899999999887766677888999999999
Q ss_pred cEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEe
Q 005093 511 YSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAA 590 (715)
Q Consensus 511 ~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 590 (715)
|.|+++|+||++++|.++.......++...++|+.++++++.+++.+| +|+|+|||+||++++.++.++|++++++|+
T Consensus 390 ~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 467 (582)
T 3o4h_A 390 FHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVA 467 (582)
T ss_dssp CEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEE
T ss_pred CEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEE
Confidence 999999999999999998887777777788999999999999997666 999999999999999999999999999999
Q ss_pred cCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHH
Q 005093 591 RNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQY 670 (715)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~ 670 (715)
.+|+.++..+..........+... +.+ ...+.+...+|+..+.++++|+|++||++|.++|+.++.++
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~ 535 (582)
T 3o4h_A 468 GASVVDWEEMYELSDAAFRNFIEQ--------LTG----GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRL 535 (582)
T ss_dssp ESCCCCHHHHHHTCCHHHHHHHHH--------HTT----TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred cCCccCHHHHhhcccchhHHHHHH--------HcC----cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHH
Confidence 999988765543322111000010 111 44567788899999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 671 ARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 671 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+++++++|.+++++++++++|.+...+...++++.+++||+++|+
T Consensus 536 ~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 536 MGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp HHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999988666777899999999999985
No 5
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=1.3e-50 Score=467.36 Aligned_cols=592 Identities=16% Similarity=0.179 Sum_probs=398.8
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcc----
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQT---- 88 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---- 88 (715)
+...||++|+.++.. .+|+... .....+..++|||||++|||+++. +++.++ .+++..+++.....
T Consensus 89 ~~~~i~~~d~~~~~~--~~l~~~~--~~~~~~~~~~~SPdG~~la~~~~~-----~i~~~~~~~g~~~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP--QSLDPPE--VSNAKLQYAGWGPKGQQLIFIFEN-----NIYYCAHVGKQAIRVVSTGKEGVIY 159 (723)
T ss_dssp CCSEEEEEESSSCCC--EECCCTT--CCSCCCSBCCBCSSTTCEEEEETT-----EEEEESSSSSCCEEEECCCBTTTEE
T ss_pred ceeeEEEEECCCCce--EeccCCc--cccccccccEECCCCCEEEEEECC-----eEEEEECCCCceEEEecCCCCCceE
Confidence 347888888876543 4444332 111236789999999999999763 677777 67777777654211
Q ss_pred --ccccccCCC---cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCce
Q 005093 89 --VHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 163 (715)
Q Consensus 89 --~~~~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (715)
..+++|.++ ....++|||||++|+|.+..... ...+....... . .......+.|.++ |.. .....
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~-~~~~~~~~~~~-~----~~~~~~~~~~~~~-G~~---~~~~~ 229 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSR-VPIMELPTYTG-S----IYPTVKPYHYPKA-GSE---NPSIS 229 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTT-SCEEEECCCSS-S----SSCCCEEEECCBT-TSC---CCEEE
T ss_pred CcccceeEEEEeccCcceEEECCCCCEEEEEEECCCc-cceEEeeccCC-c----CCCcceeccCCCC-CCC---CCeeE
Confidence 111122111 12579999999999998865422 11121111000 0 0011223334433 321 12358
Q ss_pred EEEEEccCCce-EeecCCCC------CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccc
Q 005093 164 LFVININSGEV-QAVKGIPK------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 236 (715)
Q Consensus 164 l~~~~~~~g~~-~~l~~~~~------~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 236 (715)
|++||+++++. +.++ .. ...+..+.|||||+. |++...... ....|+++|+
T Consensus 230 l~~~d~~~~~~~~~l~--~~~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~-----------~~~~i~~~d~----- 287 (723)
T 1xfd_A 230 LHVIGLNGPTHDLEMM--PPDDPRMREYYITMVKWATSTKV----AVTWLNRAQ-----------NVSILTLCDA----- 287 (723)
T ss_dssp EEEEESSSSCCCEECC--CCCCGGGSSEEEEEEEESSSSEE----EEEEEETTS-----------CEEEEEEEET-----
T ss_pred EEEEECCCCceeEEee--CCccCCCccceeEEEEEeCCCeE----EEEEEcCCC-----------CeEEEEEEeC-----
Confidence 99999999984 6663 22 335667999999997 766653321 2237999997
Q ss_pred hhhhhhhhccCCCCCCceecCCC--Cccc----cceeEcCCCCeEEEE-ecCCCCCCCCccccceeEeee-cCCCC---C
Q 005093 237 EASELELKESSSEDLPVVNLTES--ISSA----FFPRFSPDGKFLVFL-SAKSSVDSGAHSATDSLHRID-WPTNG---N 305 (715)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~lt~~--~~~~----~~~~~spdg~~l~~~-~~~~~~~~g~~~~~~~l~~~~-~~~~~---~ 305 (715)
.+++...+... .... ..+.|||||++|+|. +..+ +......+||++| ..++. .
T Consensus 288 ------------~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~~~~~l~~~d~~~~~~~~~~ 351 (723)
T 1xfd_A 288 ------------TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ----GGRGKFYHITVSSSQPNSSNDNI 351 (723)
T ss_dssp ------------TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC----SSSSCEEEEEEECSSCCSSSCCC
T ss_pred ------------CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEeccc----CCCcceeEEEEEeccCCCCccce
Confidence 67776655422 2222 489999999999998 4443 2222345799999 56665 5
Q ss_pred CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC--CeeEEEEEECCCC-cEEEecCC---CCCc
Q 005093 306 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG--SSQVIISVNVSSG-ELLRITPA---ESNF 379 (715)
Q Consensus 306 ~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~--~~~~l~~~d~~tg-~~~~l~~~---~~~~ 379 (715)
+.++.+..++. ..+.|+|||+.|++.+..+ +..+||.+++.++ +.+.++.. ...+
T Consensus 352 ~~l~~~~~~~~-------------------~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 412 (723)
T 1xfd_A 352 QSITSGDWDVT-------------------KILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTY 412 (723)
T ss_dssp CBSCCSSSCEE-------------------EEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCC
T ss_pred eEeecCCeEEE-------------------eeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCe
Confidence 55653321111 1246999999999888765 6788999998765 45556542 2334
Q ss_pred eeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccC
Q 005093 380 SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTK 459 (715)
Q Consensus 380 ~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 459 (715)
....|+++++.+++..++++.|..+++ +...+ .++.+ + +.++.+...+....+.. .+ .+.+..
T Consensus 413 ~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~---~~~~~------~-~~~~~~~~~~~~~~~~~----~~--~~~~~~ 475 (723)
T 1xfd_A 413 FSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDK---KKMFD------L-ETNEHVKKAINDRQMPK----VE--YRDIEI 475 (723)
T ss_dssp CEEEECTTSSEEEEECCSSSSCCEEEE-ETTTC---CEEEE------E-ECCHHHHHHHHTSCCCB----CC--BCCEEE
T ss_pred EEEEECCCCCEEEEEccCCCCCeEEEE-ECCCC---CEEEE------e-ccChhhhhhhhhccCCC----ce--EEEEEc
Confidence 557899999999999999999986654 43222 22111 1 12222222232222211 11 124455
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
.+| ++.++++.|++++..+++|+||++||+++... .. .+......|+++||.|+++|+||++++|..+.......+
T Consensus 476 ~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~ 554 (723)
T 1xfd_A 476 DDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 554 (723)
T ss_dssp TTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred CCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhcc
Confidence 677 99999999998767788999999999887632 22 233556678889999999999999988888766666666
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC----CCceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
+...++|+.++++++.+++.+|.++|+|+||||||++++.++.++ |++++++|+.+|+.++..+. ..+.
T Consensus 555 ~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-------~~~~ 627 (723)
T 1xfd_A 555 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA-------SAFS 627 (723)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB-------HHHH
T ss_pred CcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhh-------hhcc
Confidence 667799999999999988778899999999999999999999999 99999999999987654220 0000
Q ss_pred eccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC-CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCc
Q 005093 613 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 691 (715)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 691 (715)
..+ .+.+ ....+.+...+|...+.+++ +|+|++||++|.++|+.++.++++++++++.+++++++++++|
T Consensus 628 ~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 698 (723)
T 1xfd_A 628 ERY--------LGLH-GLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESH 698 (723)
T ss_dssp HHH--------HCCC-SSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCS
T ss_pred Hhh--------cCCc-cCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 000 0000 01111234456667888999 7999999999999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHHHHHHHHHhcC
Q 005093 692 GIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+...+...++++.+++||+++|+
T Consensus 699 ~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 699 YFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred ccccCcchHHHHHHHHHHHHHHhc
Confidence 986666667899999999999875
No 6
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=3.5e-49 Score=450.24 Aligned_cols=537 Identities=15% Similarity=0.144 Sum_probs=386.1
Q ss_pred cceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.+..++|||||++|||..+.++ +...++.++ .+|+....+. .... +..++|| ||+.|+|.+......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k---------~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVK---------FSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEE---------SCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCce---------eccEEEe-CCCEEEEEEecCccc
Confidence 4677899999999999987653 235677777 6776544321 1110 1589999 999999987653210
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce--EeecCCCC--CCccceEEEecCCCC
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK--SLSVGQVVWAPLNEG 197 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~--~~l~~~~~--~~~~~~~~~spdg~~ 197 (715)
+.........+||++++.++.. +.+..... ......+.|||||+.
T Consensus 199 -------------------------------~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~ 247 (693)
T 3iuj_A 199 -------------------------------SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF 247 (693)
T ss_dssp -------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE
T ss_pred -------------------------------ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE
Confidence 0000001237899999987653 33421111 122457889999999
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC--CceecCCCCccccceeEcCCCCeE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lt~~~~~~~~~~~spdg~~l 275 (715)
|+++..... ..++||++|+ +++ ..+.|+........+ |++||++|
T Consensus 248 ----l~~~~~~~~-----------~~~~i~~~d~-----------------~~~~~~~~~l~~~~~~~~~~-~~~~g~~l 294 (693)
T 3iuj_A 248 ----LLISAANST-----------SGNRLYVKDL-----------------SQENAPLLTVQGDLDADVSL-VDNKGSTL 294 (693)
T ss_dssp ----EEEEEESSS-----------SCCEEEEEET-----------------TSTTCCCEEEECSSSSCEEE-EEEETTEE
T ss_pred ----EEEEEccCC-----------CCcEEEEEEC-----------------CCCCCceEEEeCCCCceEEE-EeccCCEE
Confidence 988864322 2248999997 444 667787766555555 89999999
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCCC---CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNGN---FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~---~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+|.++.+ ....+|+++++.+++. +.++... . ... .|+++++.|++...
T Consensus 295 ~~~t~~~-------~~~~~l~~~d~~~~~~~~~~~l~~~~----------~----------~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 295 YLLTNRD-------APNRRLVTVDAANPGPAHWRDLIPER----------Q----------QVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp EEEECTT-------CTTCEEEEEETTSCCGGGCEEEECCC----------S----------SCE--EEEEETTEEEEEEE
T ss_pred EEEECCC-------CCCCEEEEEeCCCCCccccEEEecCC----------C----------CEE--EEEEECCEEEEEEE
Confidence 9999874 2356899999987654 2222111 0 111 68999999999999
Q ss_pred eCCeeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCc
Q 005093 353 WGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCP 431 (715)
Q Consensus 353 ~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (715)
.++..+|+.++++++..+.+.... +.+....++++++.+++..+++.+|+.++.+++.+++ ...+ . ..+
T Consensus 346 ~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~-~~~l--~-------~~~ 415 (693)
T 3iuj_A 346 VDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA-ISLY--R-------ASA 415 (693)
T ss_dssp ETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC-EEEE--E-------CCC
T ss_pred ECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe-EEEE--E-------eCC
Confidence 899999999999888888776443 3222234456889999999999999999999987553 1111 1 111
Q ss_pred hhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCc
Q 005093 432 EKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY 511 (715)
Q Consensus 432 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~ 511 (715)
.. +....+....+ .+.+.+|.+|+++++.|++....++.|+||++|||++......|......|+++||
T Consensus 416 ~~----~~~~~~~~~~~-------~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~ 484 (693)
T 3iuj_A 416 AP----FKPEDYVSEQR-------FYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGG 484 (693)
T ss_dssp SS----CCGGGEEEEEE-------EEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTC
T ss_pred CC----cChhhCeeEEE-------EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCC
Confidence 00 11112222222 45566899999999999977667889999999999877666778887888999999
Q ss_pred EEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEec
Q 005093 512 SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAAR 591 (715)
Q Consensus 512 ~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 591 (715)
+|+++|+||++++|..|............++|+.+++++|++++.+|+++|+|+|+|+||++++.++.++|++|+++|+.
T Consensus 485 ~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~ 564 (693)
T 3iuj_A 485 VYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPA 564 (693)
T ss_dssp EEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEE
T ss_pred EEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEec
Confidence 99999999999999999877666666667899999999999998899999999999999999999999999999999999
Q ss_pred CCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhh-HHHHHhcCchhhccC-CCCc-EEEEeeCCCCcCCchHHH
Q 005093 592 NPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED-LTRFHSKSPISHISK-VKTP-TIFLLGAQDLRVPVSNGL 668 (715)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~-i~~P-~Lii~G~~D~~v~~~~~~ 668 (715)
+|+.++..+........| ...++. ...... .+.+...+|+.++.+ +++| +||+||++|.+||+.++.
T Consensus 565 ~~~~d~~~~~~~~~~~~~--~~~~g~--------p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~ 634 (693)
T 3iuj_A 565 VGVLDMLRYHTFTAGTGW--AYDYGT--------SADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSF 634 (693)
T ss_dssp SCCCCTTTGGGSGGGGGC--HHHHCC--------TTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHH
T ss_pred CCcchhhhhccCCCchhH--HHHcCC--------ccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHH
Confidence 999987654321111011 111221 112233 556778899999999 8887 999999999999999999
Q ss_pred HHHHHHHHc---CCcEEEEEeCCCCccCCCC-CchHHHHHHHHHHHHHhcC
Q 005093 669 QYARALREK---GVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 669 ~~~~~l~~~---g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~wl~~~l~ 715 (715)
+++++|+.+ +.++++++++++||++..+ ....+.+..+.+||.++|+
T Consensus 635 ~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 635 KFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp HHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence 999999998 4799999999999998764 4556788899999999874
No 7
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=9.5e-49 Score=452.98 Aligned_cols=582 Identities=18% Similarity=0.224 Sum_probs=399.7
Q ss_pred EEEEEEEeecCC-CCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcc-c---
Q 005093 16 KFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQT-V--- 89 (715)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~--- 89 (715)
..||++|+.++. ....+++... +.+..++|||||++|||+++. +++.++ .+++..+++..... .
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~SPDG~~la~~~~~-----~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGE-----GFATDAKLSPKGGFVSFIRGR-----NLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSS-----SCEEEEEECTTSSEEEEEETT-----EEEEEETTTTEEEECCCCCCSSEEES
T ss_pred CcEEEEECCCCCcceEEEcccCC-----cccccccCCCCCCEEEEEeCC-----cEEEEecCCCCEEEeccCCccceecc
Confidence 478888887651 1234444433 568899999999999999753 677777 56666555432211 0
Q ss_pred -cccccCC--CcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEE
Q 005093 90 -HGSVYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 166 (715)
Q Consensus 90 -~~~~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 166 (715)
..+++.+ .....++|||||++|+|.+.+..... .+.. ....+.. .....+.|... |. ......|++
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~-~~~~-----~~~~p~~-~~~~~~~~~~~-g~---~~~~~~l~~ 267 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP-VQKR-----YEVYADR-TDVIEQRYPAA-GD---ANVQVKLGV 267 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC-EEEE-----EEECSSC-EEEEEEECCBT-TS---CCCEEEEEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCc-eEec-----CCCCCCc-ccceEeecCCC-CC---CCCeeEEEE
Confidence 0011000 01267999999999999876542211 0000 0000000 00001111111 11 012258999
Q ss_pred EEccC-CceEeecCC-CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhh
Q 005093 167 ININS-GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 244 (715)
Q Consensus 167 ~~~~~-g~~~~l~~~-~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (715)
+|+++ ++.+.+... .....+..++| |||+. |++....... ....|+++|+
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~----l~~~~~~~~~----------~~~~i~~~d~------------- 319 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH----LSFQRQSRDQ----------KKLDLVEVTL------------- 319 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE----EEEEEEETTS----------SEEEEEEEET-------------
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCE----EEEEEecccC----------CeEEEEEEEC-------------
Confidence 99999 988777311 23345678999 99999 9987642211 2247999997
Q ss_pred ccCCCCCCceecCCCCc-----cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 245 ESSSEDLPVVNLTESIS-----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 245 ~~~~~~~~~~~lt~~~~-----~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
.+++.+.+..... ....+.|||||+ +++.+..+ +..+||.+++.++ .+.++.....
T Consensus 320 ----~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~--------g~~~l~~~~~~~~-~~~l~~~~~~----- 380 (741)
T 2ecf_A 320 ----ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT--------GFQHLYRIDSKGK-AAALTHGNWS----- 380 (741)
T ss_dssp ----TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT--------SSCEEEEECSSSC-EEESCCSSSC-----
T ss_pred ----CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC--------CccEEEEEcCCCC-eeeeeecceE-----
Confidence 6777666654322 346899999999 66776553 2357999987665 5455433211
Q ss_pred ecCCCCCccccccCCCCCC-ccccCCCEEEEEeeeCC--eeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEe
Q 005093 320 QCAEGDCFPGLYSSSILSN-PWLSDGCTMLLSSIWGS--SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~-~~~~dg~~l~~~~~~~~--~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
+..+ .|+|||+.|++.+..++ ..+||.+++.++..++|+.... +....||+|++.+++..+
T Consensus 381 ---------------v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~-~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 381 ---------------VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPG-MHSASFARNASVYVDSWS 444 (741)
T ss_dssp ---------------EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCS-EEEEEECTTSSEEEEEEE
T ss_pred ---------------EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCC-ceEEEECCCCCEEEEEec
Confidence 1233 49999999988887655 6789999987777888877433 445689999999999999
Q ss_pred CCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhh-hcccc--ce-eeeecccccccccccCCCC-ceEEEEEEe
Q 005093 397 SPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKS-LLSSR--QF-SIMKIPVKGVSANLTKGAQ-KPFEAIFVS 471 (715)
Q Consensus 397 ~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~-~~~~~~~~~~~~~~~~~~g-~~l~~~l~~ 471 (715)
+...|+++++.+..++. ... ++.....+.. .+... .+ .... +++...+| ..++++++.
T Consensus 445 ~~~~p~~~~l~~~~~~~-~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~l~~~~~~ 507 (741)
T 2ecf_A 445 NNSTPPQIELFRANGEK-IAT---------LVENDLADPKHPYARYREAQRPVEF-------GTLTAADGKTPLNYSVIK 507 (741)
T ss_dssp ETTEEEEEEEEETTSCE-EEC---------SSCCCSSSTTSTTHHHHTTCCCEEE-------EEEECTTSSCEEEEEEEC
T ss_pred CCCCCCeEEEEEcCCCe-EEE---------eccCcccccccchhhhhccCCCcEE-------EEEEcCCCCEEEEEEEEe
Confidence 99999999998865332 111 1111100000 01111 11 1111 24456688 899999999
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCC-Cccch-----HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHH
Q 005093 472 SSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 545 (715)
Q Consensus 472 P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~-----~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~ 545 (715)
|++++..+++|+||++||++.... ...|. ..++.|+++||.|+++|+||.++++..+.......++...++|+.
T Consensus 508 P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~ 587 (741)
T 2ecf_A 508 PAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQL 587 (741)
T ss_dssp CSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHH
T ss_pred CCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHH
Confidence 987656678899999999876642 12343 578889999999999999998888887766666667777789999
Q ss_pred HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCC
Q 005093 546 TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTE 625 (715)
Q Consensus 546 ~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (715)
++++++.+++.+|.++|+|+||||||++++.++.++|++++++|+.+|+.++..+.. .+.. .+..
T Consensus 588 ~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~~--------~~~~ 652 (741)
T 2ecf_A 588 RGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDS-------HYTE--------RYMD 652 (741)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBH-------HHHH--------HHHC
T ss_pred HHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhcc-------ccch--------hhcC
Confidence 999999998878899999999999999999999999999999999999877542110 0000 0111
Q ss_pred CCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHH
Q 005093 626 SPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLN 705 (715)
Q Consensus 626 ~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 705 (715)
. .....+.+...+|...+.++++|+|++||++|.++|++++.+++++++..+++++++++++++|.+..... .++++.
T Consensus 653 ~-~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~ 730 (741)
T 2ecf_A 653 L-PARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADA-LHRYRV 730 (741)
T ss_dssp C-TGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHH-HHHHHH
T ss_pred C-cccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCch-hHHHHH
Confidence 1 23445667778899999999999999999999999999999999999999999999999999998865433 678999
Q ss_pred HHHHHHHhcC
Q 005093 706 IGLWFKKYCK 715 (715)
Q Consensus 706 i~~wl~~~l~ 715 (715)
+.+||+++|+
T Consensus 731 i~~fl~~~l~ 740 (741)
T 2ecf_A 731 AEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999999986
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=1.1e-48 Score=447.38 Aligned_cols=567 Identities=13% Similarity=0.130 Sum_probs=398.9
Q ss_pred eEEEEEEEeecCCCCccccccCC-Ccc-ccccceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEEEEecCcccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAP-FPV-EMTGASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (715)
...||+++..+ .+..+|+... +.. +...+..++|||||++|||....++ +..+++.++ .+|+......+...
T Consensus 93 ~~~l~~~~~~~--~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~-- 168 (695)
T 2bkl_A 93 KAILYWRQGES--GQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG-- 168 (695)
T ss_dssp SCEEEEEESTT--SCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--
T ss_pred EEEEEEEcCCC--CCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--
Confidence 56788866543 3456665432 111 1124788999999999999987653 346788777 66654311111111
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
.+..++|||||+.|+|.+.+..... .........+||++++.
T Consensus 169 -------~~~~~~wspDg~~l~~~~~d~~~~~-------------------------------~~~~~~~~~~v~~~~l~ 210 (695)
T 2bkl_A 169 -------KYATPKWTPDSKGFYYEWLPTDPSI-------------------------------KVDERPGYTTIRYHTLG 210 (695)
T ss_dssp -------TTCCCEECTTSSEEEEEECCCCTTS-------------------------------CGGGGGGGCEEEEEETT
T ss_pred -------cccceEEecCCCEEEEEEecCCCCC-------------------------------ccccCCCCCEEEEEECC
Confidence 1258999999999999876532110 00000124789999999
Q ss_pred CCce--EeecCC-CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccC
Q 005093 171 SGEV--QAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESS 247 (715)
Q Consensus 171 ~g~~--~~l~~~-~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 247 (715)
++.. +.+... ........+.|||||+. |++.+.... ...+||+++.
T Consensus 211 t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~-----------~~~~l~~~~~---------------- 259 (695)
T 2bkl_A 211 TEPSKDTVVHERTGDPTTFLQSDLSRDGKY----LFVYILRGW-----------SENDVYWKRP---------------- 259 (695)
T ss_dssp SCGGGCEEEECCCCCTTCEEEEEECTTSCC----EEEEEEETT-----------TEEEEEEECT----------------
T ss_pred CCchhceEEEecCCCCEEEEEEEECCCCCE----EEEEEeCCC-----------CceEEEEEcC----------------
Confidence 8873 233211 12234568899999999 999874321 2247999985
Q ss_pred CCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC---CCcccceeeeeeceecCCC
Q 005093 248 SEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN---FSSLEKIVDVIPVVQCAEG 324 (715)
Q Consensus 248 ~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~---~~lt~~~~~~~~~~~~~~~ 324 (715)
.+++.+.|+........+.| +||+ |++.++.+ .....|+++|+.+++. +.++... .+
T Consensus 260 -~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~-------~~~~~l~~~d~~~~~~~~~~~l~~~~----------~~ 319 (695)
T 2bkl_A 260 -GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEG-------APRQRVFEVDPAKPARASWKEIVPED----------SS 319 (695)
T ss_dssp -TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTT-------CTTCEEEEEBTTBCSGGGCEEEECCC----------SS
T ss_pred -CCCceEEeecCCCceEEEEe-cCCc-EEEEECCC-------CCCCEEEEEeCCCCCccCCeEEecCC----------CC
Confidence 66778888877666677777 7888 88887653 2346799999877543 2222110 00
Q ss_pred CCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCceeEEEeecCCEEEEEEeCCCCCCe
Q 005093 325 DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQ 403 (715)
Q Consensus 325 ~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~~~~~l~~~~~~~~~p~~ 403 (715)
. .+..+.|+ +..++++...++..+|+.+++.++..+.+... .+.+....++++++.++++.++..+|..
T Consensus 320 ~--------~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 320 A--------SLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp C--------EEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred C--------eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 0 12234566 34688888888999999999876666666543 3322334567788999999999999999
Q ss_pred EEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcE
Q 005093 404 VKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPL 483 (715)
Q Consensus 404 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~ 483 (715)
||+.++.+++ ...+ ... +. .++ ...+....+ .+...+|.++.++++.|+++...++.|+
T Consensus 390 v~~~d~~~g~-~~~l--~~~--~~-~~~--------~~~~~~~~~-------~~~~~dg~~i~~~~~~p~~~~~~~~~p~ 448 (695)
T 2bkl_A 390 IYKTSVSTGK-SELW--AKV--DV-PMN--------PEQYQVEQV-------FYASKDGTKVPMFVVHRKDLKRDGNAPT 448 (695)
T ss_dssp EEEEETTTCC-EEEE--EEC--CC-SSC--------GGGEEEEEE-------EEECTTSCEEEEEEEEETTCCCSSCCCE
T ss_pred EEEEECCCCc-EEEE--ecC--CC-CCC--------HHHCeEEEE-------EEECCCCCEEEEEEEECCCCCCCCCccE
Confidence 9999987654 1111 100 00 011 111222222 4556688999999999997666788999
Q ss_pred EEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEE
Q 005093 484 IVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVT 563 (715)
Q Consensus 484 vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~ 563 (715)
||++|||+.......|......|+++||+|+++|+||++++|..|............++|+.+++++|++++.+|+++|+
T Consensus 449 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~ 528 (695)
T 2bkl_A 449 LLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLA 528 (695)
T ss_dssp EEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEE
T ss_pred EEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEE
Confidence 99999988776555666666778899999999999999999999877655555566689999999999999888999999
Q ss_pred EEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhh
Q 005093 564 VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH 643 (715)
Q Consensus 564 l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 643 (715)
|+|+|+||++++.++.++|++|+++|+.+|+.++..+...... ..+...++. ....+..+.+...+|+..
T Consensus 529 i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~--~~~~~~~g~--------~~~~~~~~~~~~~sp~~~ 598 (695)
T 2bkl_A 529 IYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSG--RTWIPEYGT--------AEKPEDFKTLHAYSPYHH 598 (695)
T ss_dssp EEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG--GGGHHHHCC--------TTSHHHHHHHHHHCGGGC
T ss_pred EEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCC--cchHHHhCC--------CCCHHHHHHHHhcChHhh
Confidence 9999999999999999999999999999999887644321110 011111211 112345566778899999
Q ss_pred ccCCC--CcEEEEeeCCCCcCCchHHHHHHHHHHH---cCCcEEEEEeCCCCccCCCC-CchHHHHHHHHHHHHHhcC
Q 005093 644 ISKVK--TPTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 644 ~~~i~--~P~Lii~G~~D~~v~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~wl~~~l~ 715 (715)
+.+++ +|+||+||++|.+||+.++.+++++|+. .+.++++++++++||++..+ ....+.+..+++||.++|+
T Consensus 599 ~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 599 VRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp CCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 98876 7999999999999999999999999998 67899999999999998643 3355778889999999874
No 9
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=1.6e-48 Score=448.55 Aligned_cols=577 Identities=17% Similarity=0.229 Sum_probs=394.3
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cC-----CccEEEEecCccc
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-----SQLEKEFHVPQTV 89 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~ 89 (715)
..||++|+.++ +..+++... +.+..++|||||++|||+.+. .++... .+ ++..+++......
T Consensus 101 ~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~SpdG~~la~~~~~-----~i~v~~~~~~~~~~g~~~~~~~~~~~~ 168 (706)
T 2z3z_A 101 GGLVGFDMLAR--KVTYLFDTN-----EETASLDFSPVGDRVAYVRNH-----NLYIARGGKLGEGMSRAIAVTIDGTET 168 (706)
T ss_dssp TEEEEEETTTT--EEEEEECCT-----TCCTTCEECTTSSEEEEEETT-----EEEEEECBCTTSCCCCCEESCSCCBTT
T ss_pred CEEEEEECCCC--ceEEccCCc-----ccccCCcCCCCCCEEEEEECC-----eEEEEecCcccccCCCcEEeccCCCCC
Confidence 46788777554 334444433 457789999999999997542 577666 55 6666654432210
Q ss_pred --ccc-ccCC--CcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceE
Q 005093 90 --HGS-VYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSL 164 (715)
Q Consensus 90 --~~~-~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 164 (715)
.+. ++.+ .....+.|||||++|+|.+.+..... .+........... .....|.. .|. ......|
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~-~~~~~~~~~~~~~------~~~~~y~~-~g~---~~~~~~l 237 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK-PTPIVDYHPLEAE------SKPLYYPM-AGT---PSHHVTV 237 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC-CEEEEECCSSSCE------EEEECCCB-TTS---CCCEEEE
T ss_pred eEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc-eEEeeccCCCCCc------eEEeeCCC-CCC---CCCeeEE
Confidence 000 0000 01368999999999999874332211 1110000000000 00011111 111 1133789
Q ss_pred EEEEccCCceEeecCC-CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhh
Q 005093 165 FVININSGEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELEL 243 (715)
Q Consensus 165 ~~~~~~~g~~~~l~~~-~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (715)
++||+++++.+.+... .....+..+.|||||+. |++....... ....|+++|+
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~~~~----------~~~~v~~~d~------------ 291 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI----LYVAEVNRAQ----------NECKVNAYDA------------ 291 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE----EEEEEECTTS----------CEEEEEEEET------------
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCE----EEEEEeCCCC----------CeeEEEEEEC------------
Confidence 9999999998777311 22345678999999998 8887532211 2237999997
Q ss_pred hccCCCCC-CceecCCC--Cc---cccceeEcC--CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeee
Q 005093 244 KESSSEDL-PVVNLTES--IS---SAFFPRFSP--DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 315 (715)
Q Consensus 244 ~~~~~~~~-~~~~lt~~--~~---~~~~~~~sp--dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~ 315 (715)
.++ ..+.+... .. ....+.||| ||+.| +.+.++ +..+||.++..++..+.++.....
T Consensus 292 -----~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~~~~--------g~~~l~~~~~~~~~~~~l~~~~~~- 356 (706)
T 2z3z_A 292 -----ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQSRRD--------GWNHLYLYDTTGRLIRQVTKGEWE- 356 (706)
T ss_dssp -----TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEECTT--------SSCEEEEEETTSCEEEECCCSSSC-
T ss_pred -----CCCceeeEEEEccCCCeECccCCceeecCCCCEEE-EEEccC--------CccEEEEEECCCCEEEecCCCCeE-
Confidence 666 44444322 11 135689999 99854 555543 245799998666544445432211
Q ss_pred eeceecCCCCCccccccCCCCC-CccccCCCEEEEEeeeCC--eeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEE
Q 005093 316 IPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGS--SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNII 392 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~dg~~l~~~~~~~~--~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~ 392 (715)
+.. +.|+|||+.|++.+...+ ...||.+|+++++.+.++.... +....||++++.++
T Consensus 357 -------------------v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~~~~spdg~~l~ 416 (706)
T 2z3z_A 357 -------------------VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESG-MHRTQLSPDGSAII 416 (706)
T ss_dssp -------------------EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSS-EEEEEECTTSSEEE
T ss_pred -------------------EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCc-eEEEEECCCCCEEE
Confidence 112 479999999988887654 5799999999999888875444 44568999999999
Q ss_pred EEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCC-ceEEEEEEe
Q 005093 393 AVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQ-KPFEAIFVS 471 (715)
Q Consensus 393 ~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~l~~ 471 (715)
+..++...|++|++.++.+++ . + . ++..+ .+ ....+ +..+ .+.+...+| .++.++++.
T Consensus 417 ~~~~~~~~p~~i~l~d~~~~~-~-~--~------~~~~~-~~----~~~~~-----~~~~-~~~~~~~~g~~~~~~~~~~ 475 (706)
T 2z3z_A 417 DIFQSPTVPRKVTVTNIGKGS-H-T--L------LEAKN-PD----TGYAM-----PEIR-TGTIMAADGQTPLYYKLTM 475 (706)
T ss_dssp EEEECSSCSCEEEEEESSSCE-E-E--E------EECC-----------CC-----CCEE-EEEEECTTSSSEEEEEEEC
T ss_pred EEecCCCCCcEEEEEECCCCe-E-e--e------ccccc-hh----hhcCC-----CCcE-EEEEEcCCCCEEEEEEEEe
Confidence 999999999999999976543 1 1 1 11111 11 11111 1000 124455678 899999999
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCC-ccchH----HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHH
Q 005093 472 SSHKKDCSCDPLIVVLHGGPHSVSL-SSYSK----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 546 (715)
Q Consensus 472 P~~~~~~~~~P~vv~iHGg~~~~~~-~~~~~----~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~ 546 (715)
|+++++.+++|+||++|||+..... ..|.. .++.|+++||.|+++|+||.++++..+.......++...++|+.+
T Consensus 476 P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~ 555 (706)
T 2z3z_A 476 PLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMC 555 (706)
T ss_dssp CTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHH
T ss_pred CCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHH
Confidence 9987667789999999998776532 24443 578899999999999999998888887766666777777899999
Q ss_pred HHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCC
Q 005093 547 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTES 626 (715)
Q Consensus 547 ~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (715)
+++++.+++.+|.++++|+||||||++++.++.++|++++++|+.+|+.++..+.. .+.. .+...
T Consensus 556 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~~--------~~~~~ 620 (706)
T 2z3z_A 556 GVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAI-------MYGE--------RYFDA 620 (706)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBH-------HHHH--------HHHCC
T ss_pred HHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHh-------hhhh--------hhcCC
Confidence 99999988878899999999999999999999999999999999999877542210 0000 11111
Q ss_pred CChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHH
Q 005093 627 PSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNI 706 (715)
Q Consensus 627 ~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i 706 (715)
+ ....+.+...+|...+.++++|+|++||+.|.++|++++.+++++++.++++++++++|+++|.+... ...++++.+
T Consensus 621 ~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i 698 (706)
T 2z3z_A 621 P-QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETI 698 (706)
T ss_dssp T-TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHH
T ss_pred c-ccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHH
Confidence 2 23345677788988999999999999999999999999999999999999999999999999998765 667889999
Q ss_pred HHHHHHhc
Q 005093 707 GLWFKKYC 714 (715)
Q Consensus 707 ~~wl~~~l 714 (715)
.+||+++|
T Consensus 699 ~~fl~~~l 706 (706)
T 2z3z_A 699 TRYFTDHL 706 (706)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999886
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.1e-47 Score=442.32 Aligned_cols=567 Identities=14% Similarity=0.126 Sum_probs=386.8
Q ss_pred eEEEEEEEeec-CCCCccccccC-CCccc-cccceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEEEEecCccc
Q 005093 15 KKFMLSTVISK-ENENSVTFQWA-PFPVE-MTGASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTV 89 (715)
Q Consensus 15 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 89 (715)
...||+++... ++.+..+|+.. .+..+ ...+..++|||||++|||....++ +..+++.++ .+|+..........
T Consensus 132 ~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~- 210 (741)
T 1yr2_A 132 QSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVK- 210 (741)
T ss_dssp SCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEE-
T ss_pred EEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCce-
Confidence 47889866541 02233444322 22221 124678999999999999987752 225688777 66665443211111
Q ss_pred cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 90 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
+..++|||| +.|+|.+........ .........+||++++
T Consensus 211 ---------~~~~~wspD-~~l~~~~~~~~~~~~------------------------------~~~~~~~~~~v~~~~l 250 (741)
T 1yr2_A 211 ---------FSGLAWLGN-DALLYSRFAEPKEGQ------------------------------AFQALNYNQTVWLHRL 250 (741)
T ss_dssp ---------SCCCEESTT-SEEEEEECCCC--------------------------------------CCCCCEEEEEET
T ss_pred ---------eccEEEECC-CEEEEEEecCccccc------------------------------ccccCCCCCEEEEEEC
Confidence 158999999 999998754321000 0000002367999999
Q ss_pred cCCce--EeecCCCC-CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhcc
Q 005093 170 NSGEV--QAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 246 (715)
Q Consensus 170 ~~g~~--~~l~~~~~-~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (715)
.++.. +.+..... ......+.|||||+. |++.+..... ...+||++|+
T Consensus 251 gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~~----------~~~~l~~~d~--------------- 301 (741)
T 1yr2_A 251 GTPQSADQPVFATPELPKRGHGASVSSDGRW----VVITSSEGTD----------PVNTVHVARV--------------- 301 (741)
T ss_dssp TSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECTTC----------SCCEEEEEEE---------------
T ss_pred CCCchhCEEEeccCCCCeEEEEEEECCCCCE----EEEEEEccCC----------CcceEEEEEC---------------
Confidence 88763 23311111 123567899999999 9998743211 2358999997
Q ss_pred CCCCC--C-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC--CCCcccceeeeeeceec
Q 005093 247 SSEDL--P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG--NFSSLEKIVDVIPVVQC 321 (715)
Q Consensus 247 ~~~~~--~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~--~~~lt~~~~~~~~~~~~ 321 (715)
+++ + .+.|+........+ ++|||++|+|.++.. ....+|+++|+.++. .+.++.....
T Consensus 302 --~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~-------~~~~~l~~~d~~~~~~~~~~l~~~~~~------- 364 (741)
T 1yr2_A 302 --TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG-------APLKKIVRVDLSGSTPRFDTVVPESKD------- 364 (741)
T ss_dssp --ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT-------CTTCEEEEEECSSSSCEEEEEECCCSS-------
T ss_pred --CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC-------CCCCEEEEEeCCCCccccEEEecCCCC-------
Confidence 555 5 67777665555555 469999999998874 235679999987742 2222211100
Q ss_pred CCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCceeEEEeecCCEEEEEEeCCCC
Q 005093 322 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 322 ~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
.+..+.|+ ++.++++...++..+||.+++.++..+.+... .+.+....++++++.++++.++..+
T Consensus 365 ------------~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~ 430 (741)
T 1yr2_A 365 ------------NLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQ 430 (741)
T ss_dssp ------------EEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTE
T ss_pred ------------eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCC
Confidence 11223455 45688888888999999999876667777643 3333445667888999999999999
Q ss_pred CCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCC
Q 005093 401 VPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSC 480 (715)
Q Consensus 401 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~ 480 (715)
|.+||++++.+++ .+. +..+...++ ...+....+ .+.+.+|.+|.++++.|++. .++
T Consensus 431 P~~i~~~d~~tg~--~~~----l~~~~~~~~--------~~~~~~~~~-------~~~~~dg~~i~~~~~~p~~~--~~~ 487 (741)
T 1yr2_A 431 PATVLALDPATAK--TTP----WEPVHLTFD--------PADFRVEQV-------FYPSKDGTKVPMFIVRRKDA--KGP 487 (741)
T ss_dssp EEEEEEEETTTTE--EEE----CSCCCCSSC--------GGGEEEEEE-------EEECTTSCEEEEEEEEETTC--CSC
T ss_pred CCEEEEEECCCCc--EEE----EecCCCCCC--------hhHCEEEEE-------EEEcCCCCEEEEEEEecCCC--CCC
Confidence 9999999987653 111 100000111 111222222 44566889999999999854 568
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|+||++|||+.......|......|+++||+|+++|+||++++|..|.......+....++|+.+++++|++++.++++
T Consensus 488 ~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ 567 (741)
T 1yr2_A 488 LPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRH 567 (741)
T ss_dssp CCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTT
T ss_pred CcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 89999999988776666777777889999999999999999999999877655555556689999999999999888999
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCc
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSP 640 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 640 (715)
+|+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ...++. ....+..+.+...+|
T Consensus 568 ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~g~--------~~~~~~~~~~~~~sp 637 (741)
T 1yr2_A 568 GLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW--VDDYGY--------PEKEADWRVLRRYSP 637 (741)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG--HHHHCC--------TTSHHHHHHHHTTCG
T ss_pred HEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh--HHHcCC--------CCCHHHHHHHHHcCc
Confidence 9999999999999999999999999999999999887543221110001 111111 112345667788999
Q ss_pred hhhccC-CCC-cEEEEeeCCCCcCCchHHHHHHHHHHH---cCCcEEEEEeCCCCccCCCCC-chHHHHHHHHHHHHHhc
Q 005093 641 ISHISK-VKT-PTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 641 ~~~~~~-i~~-P~Lii~G~~D~~v~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~wl~~~l 714 (715)
+.++.+ +++ |+||+||++|.+||+.++.+++++|+. .|.++++++++++||++..+. ...+....+.+||.++|
T Consensus 638 ~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 717 (741)
T 1yr2_A 638 YHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFT 717 (741)
T ss_dssp GGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 999987 884 999999999999999999999999999 889999999999999976542 33578889999999887
Q ss_pred C
Q 005093 715 K 715 (715)
Q Consensus 715 ~ 715 (715)
+
T Consensus 718 ~ 718 (741)
T 1yr2_A 718 G 718 (741)
T ss_dssp T
T ss_pred C
Confidence 4
No 11
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-49 Score=455.20 Aligned_cols=589 Identities=15% Similarity=0.163 Sum_probs=392.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCC-----CCCeEEEEe-cCCccEEEEecCcc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQT 88 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~ 88 (715)
...||++|+.++. ..+++...-. ....+..++|||||++|||..+.++ ....++..+ .+|+......+...
T Consensus 35 d~~i~~~~~~~g~--~~~~~~~~~~-~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~ 111 (719)
T 1z68_A 35 DNNIVLYNIETGQ--SYTILSNRTM-KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRP 111 (719)
T ss_dssp TSCEEEEESSSCC--EEEEECHHHH-HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSS
T ss_pred CCCEEEEEcCCCc--EEEEEccccc-cccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcc
Confidence 4468887776654 3444332200 0013788999999999999876321 123566555 55554100112222
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCC---------C---------CCCCCCcccC
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC---------N---------SWKGQGDWEE 150 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---------~~~~~~~~~~ 150 (715)
. ..++|||||++|||..+.. ...+.............. . .....+.|.|
T Consensus 112 ~----------~~~~~SPDG~~la~~~~~~---i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 112 I----------QYLCWSPVGSKLAYVYQNN---IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp B----------CCEEECSSTTCEEEEETTE---EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred c----------ccceECCCCCEEEEEECCe---EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 2 7899999999999986321 111111111100000000 0 0112456777
Q ss_pred CcCcccCCcc-----------------------------------CceEEEEEccCCceE---eecC----CCCCCccce
Q 005093 151 DWGETYAGKR-----------------------------------QPSLFVININSGEVQ---AVKG----IPKSLSVGQ 188 (715)
Q Consensus 151 ~~g~~~~~~~-----------------------------------~~~l~~~~~~~g~~~---~l~~----~~~~~~~~~ 188 (715)
| |..++... ...|++||+++++.. .+.. ......+..
T Consensus 179 D-G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 179 N-GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp T-SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred C-CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 7 44443211 127999999998752 4410 012334678
Q ss_pred EEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEe----cccccchhhhhhhhccCCCCCCceecC-----CC
Q 005093 189 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR----VSLYKSEASELELKESSSEDLPVVNLT-----ES 259 (715)
Q Consensus 189 ~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lt-----~~ 259 (715)
++|||||+ ++++..... ....+|+++| + .+++.+.++ ..
T Consensus 258 ~~~SpD~~-----~~~~~~~~~----------~~~~~l~~~d~~~~~-----------------~~g~~~~~~~~~~~~~ 305 (719)
T 1z68_A 258 LTWVTDER-----VCLQWLKRV----------QNVSVLSICDFREDW-----------------QTWDCPKTQEHIEESR 305 (719)
T ss_dssp EEESSSSE-----EEEEEEESS----------TTEEEEEEEEECSSS-----------------SSEECCGGGEEEEECS
T ss_pred eEEeCCCe-----EEEEEeccc----------cCeEEEEEEcccCCC-----------------CCCceEEEEecccccC
Confidence 99999965 666532111 0123699999 6 666666665 23
Q ss_pred Ccccc-----ceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCC
Q 005093 260 ISSAF-----FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 260 ~~~~~-----~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
...+. .|.|||||+.|+|.+... .+..+||++++.+++.+.++....++
T Consensus 306 ~~~~~~~~~~~~~~spdg~~l~~~~~~~-------~g~~~l~~~~~~~~~~~~lt~~~~~v------------------- 359 (719)
T 1z68_A 306 TGWAGGFFVSTPVFSYDAISYYKIFSDK-------DGYKHIHYIKDTVENAIQITSGKWEA------------------- 359 (719)
T ss_dssp SSCSSSSSCCCCEECTTSSCEEEEEECT-------TSCEEEEEESSCSTTCEECSCSSSCE-------------------
T ss_pred CceEccccCCccEECCCCCeEEEEEEcc-------CCceEEEEEECCCCceEecccCceEE-------------------
Confidence 34444 899999999999865543 23467999999887766666433221
Q ss_pred CCCCccccCCCEEEEEeee----CCeeEEEEEECCCC--cEEEecCC----CCCceeEEEeecCCEEEEEEeCCCCCCeE
Q 005093 335 ILSNPWLSDGCTMLLSSIW----GSSQVIISVNVSSG--ELLRITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQV 404 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~----~~~~~l~~~d~~tg--~~~~l~~~----~~~~~~~~~s~~~~~l~~~~~~~~~p~~l 404 (715)
..+.++ |++.|++++.. .+..+||.+++.+| +.+.++.. ...+....|+++++.+++..++++.| .+
T Consensus 360 -~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~ 436 (719)
T 1z68_A 360 -INIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-IS 436 (719)
T ss_dssp -EEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EE
T ss_pred -EEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eE
Confidence 122344 88889998876 56789999999766 45677642 12344568899999999988888877 57
Q ss_pred EEEeecccCCCcceeeeccCCCCCCCchhhhhhcccccee-eeecccccccccccCCCCceEEEEEEecCCCCCCCCCcE
Q 005093 405 KYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS-IMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPL 483 (715)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~ 483 (715)
++.++.+++. .. +...|+.+...+....+. ... +++...+ .+++++++.|++++..+++|+
T Consensus 437 ~l~d~~~g~~-~~---------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~l~~~~~~P~~~~~~~~~p~ 498 (719)
T 1z68_A 437 TLHDGRTDQE-IK---------ILEENKELENALKNIQLPKEEI-------KKLEVDE-ITLWYKMILPPQFDRSKKYPL 498 (719)
T ss_dssp EEECSSSCCE-EE---------EEECCHHHHHHTTSBCCCEEEE-------EEEEETT-EEEEEEEEECTTCCSSSCEEE
T ss_pred EEEECCCCCE-EE---------EeecchhhhhhhccccCCceEE-------EEEecCC-eEEEEEEEeCCCCCCCCCccE
Confidence 7878755431 11 123344332223322221 111 1334445 899999999998766788999
Q ss_pred EEEEcCCCCCCC-Cccch-HHHHHH-HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 484 IVVLHGGPHSVS-LSSYS-KSLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 484 vv~iHGg~~~~~-~~~~~-~~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
||++||++.... ...|. .....| +++||.|+++|+||.++++..+.......++...++|+.++++++.+++.+|.+
T Consensus 499 vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~ 578 (719)
T 1z68_A 499 LIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEK 578 (719)
T ss_dssp EEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred EEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCc
Confidence 999999886642 22332 234444 579999999999999988888776666677767799999999999998778899
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCC-ChhhHHHHHhcC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKS 639 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s 639 (715)
+|+|+||||||++++.++.++|++|+++|+++|+.++..+.. .+... +.+.+ .....+.+...+
T Consensus 579 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~~~--------~~g~~~~~~~~~~~~~~~ 643 (719)
T 1z68_A 579 RIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYAS-------VYTER--------FMGLPTKDDNLEHYKNST 643 (719)
T ss_dssp EEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBH-------HHHHH--------HHCCSSTTTTHHHHHHTC
T ss_pred eEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcc-------ccchh--------hcCCcccccchhhhhhCC
Confidence 999999999999999999999999999999999886542210 00000 01111 123345677788
Q ss_pred chhhccCCCC-cEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 640 PISHISKVKT-PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 640 p~~~~~~i~~-P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
|...+.++++ |+|++||++|.++|+.++.+++++|++++++++++++++++|.+ ..+...++++.+.+||+++|+
T Consensus 644 ~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 644 VMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp SGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred HhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 8888999988 89999999999999999999999999999999999999999998 445567889999999999885
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=6.4e-47 Score=433.69 Aligned_cols=532 Identities=15% Similarity=0.099 Sum_probs=375.7
Q ss_pred cceEEeeC-CCCceEEEEecCCC-CCCeEEEEe-cCC-ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 44 GASAVVPS-PSGSKLLVVRNPEN-ESPIQFELW-SQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 44 ~~~~~~~S-pdg~~la~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
....++|| |||++|||+...++ +..+++.++ .+| +. +. .... ..+..++|||||+.|+|.+.+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~---~~~~------~~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IA---DKVS------GTNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CC---CCEE------EECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CC---cccc------CceeeEEEecCCCEEEEEEECCC
Confidence 46789999 99999999988653 334688888 666 42 11 1010 01268999999999999865320
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce--EeecCCCCCCccceEEEecCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~--~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
+ ...+||++++.++.. +.+...........+.|||||+.
T Consensus 244 ---------------------------------~------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 244 ---------------------------------L------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT 284 (751)
T ss_dssp ---------------------------------C------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE
T ss_pred ---------------------------------C------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE
Confidence 0 125899999988753 23311122223457889999999
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC--Cc--eecCCCCccccceeEcCC--
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PV--VNLTESISSAFFPRFSPD-- 271 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~lt~~~~~~~~~~~spd-- 271 (715)
|+|..+.. ..++||++|+ .++ +. +.++... ..+.|++|
T Consensus 285 ----l~~~~~~~------------~~~~l~~~d~-----------------~~~~~~~~~~~l~~~~---~~~~~s~~~~ 328 (751)
T 2xe4_A 285 ----LCIGSQSP------------ETAEVHLLDL-----------------RKGNAHNTLEIVRPRE---KGVRYDVQMH 328 (751)
T ss_dssp ----EEEEEECS------------SCEEEEEEES-----------------SSCTTCCCEEESSCCC---TTCCEEEEEE
T ss_pred ----EEEEecCC------------CCceEEEEEC-----------------CCCCCCceeEEeecCC---CCceEEEeee
Confidence 99987432 2358999997 443 34 5666432 34566666
Q ss_pred -CCeEEEEecCCCCCCCCccccceeEeeecCCC-CCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEE
Q 005093 272 -GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 348 (715)
Q Consensus 272 -g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~-~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~ 348 (715)
|++|+|.++.+. ....+|+++++.++ ..+. +.....+. .+.. ++.+++.|+
T Consensus 329 ~g~~l~~~t~~~~------a~~~~L~~~d~~~~~~~~~~li~~~~~~------------------~l~~--~~~~~~~lv 382 (751)
T 2xe4_A 329 GTSHLVILTNEGG------AVNHKLLIAPRGQPSDWSHVLVDHSEDV------------------FMES--IAVRSNYLV 382 (751)
T ss_dssp TTTEEEEEECTTT------CTTCEEEEEETTSTTCCCCEEECCCSSE------------------EEEE--EEECSSEEE
T ss_pred eCCEEEEEeCCCC------CCCcEEEEEcCCCcccceeeEECCCCCc------------------EEEE--EEEECCEEE
Confidence 999999998741 23568999998752 3233 22111100 0111 344567899
Q ss_pred EEeeeCCeeEEEEEEC-------CCCc-EEEecCCCCCceeEEE------eecCCEEEEEEeCCCCCCeEEEEeecccCC
Q 005093 349 LSSIWGSSQVIISVNV-------SSGE-LLRITPAESNFSWSLL------TLDGDNIIAVSSSPVDVPQVKYGYFVDKAN 414 (715)
Q Consensus 349 ~~~~~~~~~~l~~~d~-------~tg~-~~~l~~~~~~~~~~~~------s~~~~~l~~~~~~~~~p~~l~~~~~~~~~~ 414 (715)
+....++..+|+.+++ ++++ .+.|...... ....+ +.+++.++++.+++..|+++|.+++.+++
T Consensus 383 ~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~- 460 (751)
T 2xe4_A 383 VAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPI-FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS- 460 (751)
T ss_dssp EEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSS-CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC-
T ss_pred EEEEeCCEEEEEEEecccccccccCCccceEECCCCce-eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc-
Confidence 9999999999999996 6777 7777544322 22344 45778899999999999999999987553
Q ss_pred CcceeeeccCCCCC-CCchhhhhhccccceeeeecccccccccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC
Q 005093 415 KGTWSWLNVSSPIS-RCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS 493 (715)
Q Consensus 415 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~ 493 (715)
...+ ... +.. .++ ...+.... +.+.+.+|..|+++++.|++....++.|+||++|||+..
T Consensus 461 ~~~l--~~~--~~~~~~~--------~~~~~~~~-------~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~ 521 (751)
T 2xe4_A 461 RTAV--KVR--EVGGGFD--------AANYKVER-------RFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGL 521 (751)
T ss_dssp EEEE--EEC--CCCTTCC--------GGGEEEEE-------EEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTC
T ss_pred EEEE--ecc--ccccCCC--------ccceEEEE-------EEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCc
Confidence 1111 100 010 111 11122222 245566889999999999876566789999999998877
Q ss_pred CCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhh-cCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHH
Q 005093 494 VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGF 572 (715)
Q Consensus 494 ~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~-~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~ 572 (715)
.....|....+.|+++||+|+++|+||++++|..|.. .....++...++|+.+++++|++++.+|++||+|+|+|+||+
T Consensus 522 ~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~ 601 (751)
T 2xe4_A 522 SMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGL 601 (751)
T ss_dssp CCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHH
T ss_pred CCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHH
Confidence 6555676667789999999999999999999999877 555556667789999999999999889999999999999999
Q ss_pred HHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCc-E
Q 005093 573 LTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTP-T 651 (715)
Q Consensus 573 ~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~ 651 (715)
+++.++.++|++|+++|+.+|+.++.........+... ..+ ..+......+..+.+...+|+.++.++++| +
T Consensus 602 la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--~~~-----~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~ 674 (751)
T 2xe4_A 602 LMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTT--GEW-----EEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNI 674 (751)
T ss_dssp HHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHH--HHT-----TTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEE
T ss_pred HHHHHHHhCchheeEEEEeCCcchHHhhhcccCcccch--hhH-----HHcCCCCCHHHHHHHHhcChhhhhccCCCCce
Confidence 99999999999999999999999876553322221110 011 111111123344567788999999999997 9
Q ss_pred EEEeeCCCCcCCchHHHHHHHHHHHcC---CcEEEEEeCCCCccCCCCC-chHHHHHHHHHHHHHhcC
Q 005093 652 IFLLGAQDLRVPVSNGLQYARALREKG---VETKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 652 Lii~G~~D~~v~~~~~~~~~~~l~~~g---~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~wl~~~l~ 715 (715)
||+||++|.+||+.++.+++++|+.++ ..+.+.+++++||++.... ...+....+.+||.++|+
T Consensus 675 Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 675 MVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999984 4566777799999987543 344567789999999874
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=3.9e-39 Score=359.71 Aligned_cols=471 Identities=14% Similarity=0.133 Sum_probs=324.7
Q ss_pred ceEEEEEccCCc--eEeec-CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 162 PSLFVININSGE--VQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 162 ~~l~~~~~~~g~--~~~l~-~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
.++|.+.+.|.. -+.+- +..... .....-++|++....+++.... .+ ...+++|.++++.
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~-~~----------~~~~~~~~~~~~~----- 278 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYI-YVSAGKLLSDTISSSLIFISAN-KD----------FYNYDNYILDTKY----- 278 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSC-EEEEEESSCTTTCSSEEEEEEE-SS----------SSCEEEEEEECSS-----
T ss_pred CEEEEEECCCChHHCeEEeccCCCce-EEEEEEecCCCceEEEEEEEEe-cc----------cCceeEEEEcCCC-----
Confidence 679999886653 22221 122222 2234456777741001232221 11 1235889988610
Q ss_pred hhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-----C---C-cc
Q 005093 239 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-----F---S-SL 309 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-----~---~-lt 309 (715)
..++..+|..+.. ..+.++++|+.++++..+-.. .|......+|+++++++... . . ++
T Consensus 279 ----------~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 279 ----------KNLKLQKINMPSD--ATLQGSFKEYVFWLLRSDWKF-KSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp ----------SSCEEEECCSCTT--CEEEEEETTEEEEECSSCEEE-TTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred ----------CCCcceEeecCCc--ceEeeeECCEEEEEECccccc-ccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 1245455643332 335567777544444332110 00112356799999876421 1 1 11
Q ss_pred cceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEE-ecCC-CCCceeEEEe
Q 005093 310 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR-ITPA-ESNFSWSLLT 385 (715)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~-l~~~-~~~~~~~~~s 385 (715)
...+ ..+..+.|..+ .++++...++..+|+.+++.+|+ .+. +... .+.++....+
T Consensus 346 ~~~~-------------------~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~ 404 (711)
T 4hvt_A 346 PTAN-------------------EVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSY 404 (711)
T ss_dssp CCTT-------------------EEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECC
T ss_pred CCCC-------------------CeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeec
Confidence 1111 12334567755 58888888999999999988774 444 4333 2334434455
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeecccCCCcceeeeccCCCCCCCchhhhhhccccceeeeecccccccccccCCCCceE
Q 005093 386 LDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPF 465 (715)
Q Consensus 386 ~~~~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l 465 (715)
++++.+++..+++..|+.++++++. ++ ... +...+.. +....+....+ .+++.+|.+|
T Consensus 405 ~~~~~~~~~~ss~~~P~~~~~~d~~-~~-~~~---------l~~~~~~----~~~~~~~~e~v-------~~~s~DG~~i 462 (711)
T 4hvt_A 405 EEEEEALITIENSIVPPTIYLWVKT-HE-LKI---------IRKALYS----FDSENYVLEQK-------EATSFDGVKI 462 (711)
T ss_dssp TTCSCEEEEEECSSSCCEEEEECTT-SC-EEE---------EECCSSC----CCGGGEEEEEE-------EEECTTSCEE
T ss_pred CcCCEEEEEEecCCCCCEEEEEeCC-Cc-EEE---------EecCCcc----cCcccCeeEEE-------EEECCCCeEE
Confidence 6788999999999999999999976 32 111 1111111 11122222222 5566789999
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHH-HHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhH
Q 005093 466 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDV 544 (715)
Q Consensus 466 ~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~-~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~ 544 (715)
+++++.|++.+..++.|+||++|||++......|.... +.|+++||+|+++|+||++++|..|.......++...++|+
T Consensus 463 ~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~ 542 (711)
T 4hvt_A 463 PYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDF 542 (711)
T ss_dssp EEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHH
T ss_pred EEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHH
Confidence 99999999876678999999999998877666776655 58899999999999999999999998887777777789999
Q ss_pred HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCC
Q 005093 545 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFT 624 (715)
Q Consensus 545 ~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (715)
.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ...++.
T Consensus 543 ~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~--~~~~G~------- 613 (711)
T 4hvt_A 543 FAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSW--VTEYGD------- 613 (711)
T ss_dssp HHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HHHHCC-------
T ss_pred HHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHH--HHHhCC-------
Confidence 99999999999899999999999999999999999999999999999999987655332211111 111221
Q ss_pred CCCChhhHHHHHhcCchhhccCCCC--cEEEEeeCCCCcCCchHHHHHHHHH-HHcCCcEEEEEeCCCCccCCCC-CchH
Q 005093 625 ESPSVEDLTRFHSKSPISHISKVKT--PTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERP-QSDF 700 (715)
Q Consensus 625 ~~~~~~~~~~~~~~sp~~~~~~i~~--P~Lii~G~~D~~v~~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~-~~~~ 700 (715)
....+..+.+...+|+.++.++++ |+||+||++|.+||+.++.+++++| ++.|.+++++++++++|++... ....
T Consensus 614 -p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~ 692 (711)
T 4hvt_A 614 -PEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESA 692 (711)
T ss_dssp -TTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHH
T ss_pred -CcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHH
Confidence 122345677888999999999886 9999999999999999999999999 9999999999999999998653 3345
Q ss_pred HHHHHHHHHHHHhcC
Q 005093 701 ESFLNIGLWFKKYCK 715 (715)
Q Consensus 701 ~~~~~i~~wl~~~l~ 715 (715)
.....+.+||.++|+
T Consensus 693 ~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 693 NYFINLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC
Confidence 667789999999875
No 14
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.92 E-value=3.2e-24 Score=215.81 Aligned_cols=231 Identities=16% Similarity=0.199 Sum_probs=170.3
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
+...+|..+.+++..|......++.|+||++|||++... ...+...+..|+++||.|+++|+||.+.... ..
T Consensus 19 ~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~-------~~ 91 (276)
T 3hxk_A 19 FSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN-------YN 91 (276)
T ss_dssp CCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC-------SC
T ss_pred ccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC-------CC
Confidence 344577888866655543223478899999999775433 3456678889999999999999999543210 01
Q ss_pred CCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhh-CCCceeEEEecCCcchhhhhccCCCCCCcee
Q 005093 536 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTTDIPDWCY 611 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 611 (715)
.......|+.++++++.+.. .+|.++|+|+|||+||.+++.++.+ .+.+++++|+.+|+.++........ .
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~--~--- 166 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDL--S--- 166 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSS--S---
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcch--h---
Confidence 11234789999999998864 3788999999999999999999987 6889999999999876543211100 0
Q ss_pred eeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCc
Q 005093 612 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 691 (715)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 691 (715)
...+. + +.. ...++...+.++.+|+|++||++|.++|++++..+++.+++.+.+++++++++++|
T Consensus 167 --------~~~~~--~--~~~---~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H 231 (276)
T 3hxk_A 167 --------HFNFE--I--ENI---SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPH 231 (276)
T ss_dssp --------SSCCC--C--SCC---GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCT
T ss_pred --------hhhcC--c--hhh---hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 01111 1 111 44567777888899999999999999999999999999999999999999999999
Q ss_pred cCCCCCc------------hHHHHHHHHHHHHHhc
Q 005093 692 GIERPQS------------DFESFLNIGLWFKKYC 714 (715)
Q Consensus 692 ~~~~~~~------------~~~~~~~i~~wl~~~l 714 (715)
++..... ..++++.+.+||+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 232 GVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp TCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred CccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 8875333 3568888999998864
No 15
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.92 E-value=5.8e-24 Score=211.19 Aligned_cols=208 Identities=17% Similarity=0.182 Sum_probs=143.7
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC-
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG- 537 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~- 537 (715)
+.||.+|.|+++.|+ ...+.|+||++||++.......+...++.|+++||+|+++|+||.+..+............
T Consensus 37 ~~dG~~i~g~l~~P~---~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~ 113 (259)
T 4ao6_A 37 EVDGRTVPGVYWSPA---EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVG 113 (259)
T ss_dssp EETTEEEEEEEEEES---SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGG
T ss_pred eeCCeEEEEEEEeCC---CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhh
Confidence 458999999999997 4567899999999887655556777889999999999999999965443322111111110
Q ss_pred --------------ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC
Q 005093 538 --------------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT 603 (715)
Q Consensus 538 --------------~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~ 603 (715)
...+.|..++++++... +|+++|+++|+|+||.+++.++...| +++++++..+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~------ 184 (259)
T 4ao6_A 114 LDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEG------ 184 (259)
T ss_dssp STTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTS------
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEecccccc------
Confidence 01134667777877665 68899999999999999999999876 56666654332110
Q ss_pred CCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEE
Q 005093 604 TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 683 (715)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 683 (715)
... .++...+.++++|+|++||++|.+||++++.++++++. ..+.++
T Consensus 185 -----------------------~~~--------~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~--~~~k~l 231 (259)
T 4ao6_A 185 -----------------------VNG--------EDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLG--TKQKTL 231 (259)
T ss_dssp -----------------------TTH--------HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC--CSSEEE
T ss_pred -----------------------ccc--------cchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEE
Confidence 001 12345567899999999999999999999999999884 345678
Q ss_pred EEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 684 IVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 684 ~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+++++..|.. ...+..+.+++||++|||
T Consensus 232 ~~~~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 232 HVNPGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEESSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred EEeCCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 8998754433 345678899999999997
No 16
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=3.8e-24 Score=210.41 Aligned_cols=214 Identities=17% Similarity=0.216 Sum_probs=162.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhh-------cCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-------SLP 533 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~-------~~~ 533 (715)
+|..+.++++.|++ ..++.|+||++||.... ...+...++.|+++||.|+++|++|.++....+.. ...
T Consensus 14 ~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~ 89 (241)
T 3f67_A 14 QGENMPAYHARPKN--ADGPLPIVIVVQEIFGV--HEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVS 89 (241)
T ss_dssp TTEEEEEEEEEETT--CCSCEEEEEEECCTTCS--CHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGG
T ss_pred CCcceEEEEecCCC--CCCCCCEEEEEcCcCcc--CHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhh
Confidence 77899999999984 33678999999995443 34677788899999999999999986543322110 000
Q ss_pred CCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
........+|+.++++++.++. +|.++|+|+|||+||.+++.++.++|+ ++++++.++..... .
T Consensus 90 ~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~-------~------- 153 (241)
T 3f67_A 90 KVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE-------K------- 153 (241)
T ss_dssp GSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC-------C-------
T ss_pred cCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC-------C-------
Confidence 0111234789999999999887 788999999999999999999999887 66776655532100 0
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
..+...+|...+.++++|+|+++|++|..+|++.+..+++.+++.+.+++++++++++|.+
T Consensus 154 -------------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 214 (241)
T 3f67_A 154 -------------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAF 214 (241)
T ss_dssp -------------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTT
T ss_pred -------------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcce
Confidence 0112244556677889999999999999999999999999999999999999999999988
Q ss_pred CCC-------CchHHHHHHHHHHHHHh
Q 005093 694 ERP-------QSDFESFLNIGLWFKKY 713 (715)
Q Consensus 694 ~~~-------~~~~~~~~~i~~wl~~~ 713 (715)
... ....+.++.+++||++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 215 NADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 632 22356788999999865
No 17
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=6.7e-24 Score=224.73 Aligned_cols=323 Identities=14% Similarity=0.111 Sum_probs=202.5
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceE-----EeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccc
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASA-----VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (715)
.+|. ....+...++||..+ +.... |+|||||++|||.+..+ +..++|.++ .+++.++++......
T Consensus 12 ~~~~--~~~~g~~~~~lt~~~-----~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~~~l~~~d~~~g~~~~lt~~~~~~- 82 (388)
T 3pe7_A 12 DTYQ--DASTGAQVTRLTPPD-----VTCHRNYFYQKCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDN- 82 (388)
T ss_dssp EEEE--CTTTCCEEEECSCTT-----SCEECCCTTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTCEEEECCCSSCBC-
T ss_pred eEEe--cCCCCcceEEecCCc-----ccccchhhcCccCCCCCCEEEEEEcCC-CCceEEEEeCCCCceEEeeeCCCCC-
Confidence 4565 233444567777654 33333 89999999999998755 667899888 677777766543222
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCC--cccCCcCccc------------
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG--DWEEDWGETY------------ 156 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~------------ 156 (715)
...+.|||||++|+|....... ..+................+.... ...++ |..+
T Consensus 83 --------~~~~~~spdg~~l~~~~~~~~l--~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 83 --------TFGGFLSPDDDALFYVKDGRNL--MRVDLATLEENVVYQVPAEWVGYGTWVANSD-CTKLVGIEIRREDWVP 151 (388)
T ss_dssp --------SSSCEECTTSSEEEEEETTTEE--EEEETTTCCEEEEEECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCC
T ss_pred --------ccceEEcCCCCEEEEEeCCCeE--EEEECCCCcceeeeechhhcccccceeECCC-CCeeccccccCccccc
Confidence 1367899999999998743210 011111110000000000000000 01111 1111
Q ss_pred -----------CCccCceEEEEEccCCceEeecCCCCCCccceEEEec-CCCCCccEEEEEeecCccceeeeeeeecCCc
Q 005093 157 -----------AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 224 (715)
Q Consensus 157 -----------~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp-dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~ 224 (715)
.......|+++|+++|+.+.+ .........+.||| ||+. |+|....... ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~~---------~~~~ 216 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI--LQENQWLGHPIYRPYDDST----VAFCHEGPHD---------LVDA 216 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCTT---------TSSC
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEEe--ecCCccccccEECCCCCCE----EEEEEecCCC---------CCcc
Confidence 112347899999999999888 34444567899999 9999 9998742110 1235
Q ss_pred eEEEEecccccchhhhhhhhccCCCCCCceecCCCCc--cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 225 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
+||.+|+ .++..+.++.... .+..|.|||||++|+|.+.... .....||++|+.+
T Consensus 217 ~l~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 217 RMWLINE-----------------DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG------SPDRFIYSADPET 273 (388)
T ss_dssp SEEEEET-----------------TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT------CCCEEEEEECTTT
T ss_pred eEEEEeC-----------------CCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC------CCcceEEEEecCC
Confidence 8999997 7778888887653 4678999999999999987642 1123599999998
Q ss_pred CCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee------CCeeEEEEEECCCCcEEEecCCC
Q 005093 303 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPAE 376 (715)
Q Consensus 303 ~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~------~~~~~l~~~d~~tg~~~~l~~~~ 376 (715)
++.+.++.... .. .+........|+|||+.|++.... .+...||.+|+++++.++++...
T Consensus 274 g~~~~l~~~~~-~~-------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (388)
T 3pe7_A 274 LENRQLTSMPA-CS-------------HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD 339 (388)
T ss_dssp CCEEEEEEECC-EE-------------EEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECC
T ss_pred CceEEEEcCCC-ce-------------eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc
Confidence 77655432211 00 000123345799999988887654 55678999999999999988665
Q ss_pred C-----------CceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 377 S-----------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 377 ~-----------~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
. ......|++||+.|++.+... ..++||++++..+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 340 TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPES 385 (388)
T ss_dssp CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGG
T ss_pred CcccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChh
Confidence 4 234468999999999887654 5567999887543
No 18
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.91 E-value=9e-24 Score=209.23 Aligned_cols=240 Identities=13% Similarity=0.167 Sum_probs=161.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC-cc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQ 539 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~-~~ 539 (715)
+|.+++++++.|++ ..++.|+||++||.+.......|...++.|+++||.|+++|+|| +|.+.... .... ..
T Consensus 9 ~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~--~~~~~~~ 81 (251)
T 2wtm_A 9 DGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYG---HGKSDGKF--EDHTLFK 81 (251)
T ss_dssp TTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTT---STTSSSCG--GGCCHHH
T ss_pred CCcEEEEEEEccCC--CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCC---CCCCCCcc--ccCCHHH
Confidence 77899999998863 23467899999996655334567778889999999999999999 44432110 0111 12
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCC
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 619 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (715)
..+|+.++++++.+...+ ++++|+||||||.+++.+|.++|++++++|+++|.................+........
T Consensus 82 ~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 2wtm_A 82 WLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDE 159 (251)
T ss_dssp HHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSE
T ss_pred HHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcchH
Confidence 256778888888665323 589999999999999999999999999999999875432111000000000000000000
Q ss_pred CCCCCCCC-ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc
Q 005093 620 KDSFTESP-SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 698 (715)
Q Consensus 620 ~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 698 (715)
...+.... ...........++...+.++++|+|+++|++|..+|++.+..+++.+ .+++++++++++|.+ .+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~--~~~ 233 (251)
T 2wtm_A 160 LDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY----KNCKLVTIPGDTHCY--DHH 233 (251)
T ss_dssp EEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS----SSEEEEEETTCCTTC--TTT
T ss_pred HhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC----CCcEEEEECCCCccc--chh
Confidence 00000000 01112222234455567788999999999999999998888777665 358899999999988 566
Q ss_pred hHHHHHHHHHHHHHhcC
Q 005093 699 DFESFLNIGLWFKKYCK 715 (715)
Q Consensus 699 ~~~~~~~i~~wl~~~l~ 715 (715)
..++.+.+.+||+++++
T Consensus 234 ~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 234 LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 67899999999998764
No 19
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.91 E-value=4.8e-23 Score=207.26 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=162.3
Q ss_pred CCceEEEEEEecCC---CCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 461 AQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 461 ~g~~l~~~l~~P~~---~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
+|..+.+.+|.|+. +...++.|+||++|||++... ...+...+..|+++||.|+++|+||.+.. +. .
T Consensus 12 ~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~--------~~-~ 82 (277)
T 3bxp_A 12 AAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGD--------QS-V 82 (277)
T ss_dssp TTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTT--------CC-C
T ss_pred CCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCC--------Cc-c
Confidence 56778888999973 234577899999999765432 34567788899999999999999994311 11 1
Q ss_pred CccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhC--------------CCceeEEEecCCcchhhh
Q 005093 537 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------------PDKFVAAAARNPLCNLAL 599 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--------------p~~~~~~v~~~~~~~~~~ 599 (715)
......|+.++++++.+.. .++.++|+|+|||+||.+++.++.++ +.+++++|+.+|+.++..
T Consensus 83 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~ 162 (277)
T 3bxp_A 83 YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTA 162 (277)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTS
T ss_pred CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCC
Confidence 2234789999999998762 26778999999999999999999885 678999999999876321
Q ss_pred hccCCCCCCceeeeccCCCCCCCCCCCCChhhHH-----HHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHH
Q 005093 600 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT-----RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 674 (715)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l 674 (715)
... . ..... .....+|...+.++.+|+|++||++|.++|++++..+++.+
T Consensus 163 ~~~--------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l 217 (277)
T 3bxp_A 163 GFP--------------T-----------TSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAM 217 (277)
T ss_dssp SSS--------------S-----------SHHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHH
T ss_pred CCC--------------C-----------ccccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHH
Confidence 100 0 00001 12345666777788899999999999999999999999999
Q ss_pred HHcCCcEEEEEeCCCCccCCCCCc--------------hHHHHHHHHHHHHHh
Q 005093 675 REKGVETKVIVFPNDVHGIERPQS--------------DFESFLNIGLWFKKY 713 (715)
Q Consensus 675 ~~~g~~~~~~~~~~~~H~~~~~~~--------------~~~~~~~i~~wl~~~ 713 (715)
++.+.+++++++++++|.+..... ..++++.+.+||+++
T Consensus 218 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 218 LQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp HHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 999999999999999997754332 357888999999875
No 20
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.91 E-value=3.9e-23 Score=217.72 Aligned_cols=216 Identities=16% Similarity=0.166 Sum_probs=169.3
Q ss_pred cccCC-CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch----------HHHHHHHhCCcEEEEEcCCCCCCC
Q 005093 456 NLTKG-AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS----------KSLAFLSSVGYSLLIVNYRGSLGF 524 (715)
Q Consensus 456 ~~~~~-~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~----------~~~~~la~~G~~vi~~d~rG~~~~ 524 (715)
.+.+. +|..+.+++|.|+++++.+++|+||++||+++........ ....+....|+.|+++|++|.+++
T Consensus 148 ~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred eeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 45666 8899999999999876788899999999977543221111 012334578899999999998888
Q ss_pred chhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC
Q 005093 525 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 604 (715)
Q Consensus 525 g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~ 604 (715)
+..+..............|+.++++++.++..+|+++|+|+|||+||++++.++.++|++|+++++++|..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------- 300 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------- 300 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-------
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-------
Confidence 7776543333334556889999999999987788899999999999999999999999999999999986410
Q ss_pred CCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC-CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEE
Q 005093 605 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 683 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 683 (715)
..+..+. +|+|++||+.|..+|++++.+++++|++.|.++++
T Consensus 301 -------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 343 (380)
T 3doh_A 301 -------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRY 343 (380)
T ss_dssp -------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEE
T ss_pred -------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEE
Confidence 1122233 89999999999999999999999999999999999
Q ss_pred EEeCCC---CccCCCCCchHHHHH--HHHHHHHHhcC
Q 005093 684 IVFPND---VHGIERPQSDFESFL--NIGLWFKKYCK 715 (715)
Q Consensus 684 ~~~~~~---~H~~~~~~~~~~~~~--~i~~wl~~~l~ 715 (715)
++++++ +|++.........+. .+++||.++.+
T Consensus 344 ~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~~r 380 (380)
T 3doh_A 344 TEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFEQSR 380 (380)
T ss_dssp EEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHTCC-
T ss_pred EEecCCcccCCCCCCchhHHHhcCCHHHHHHHHhhcC
Confidence 999999 555544445556666 89999987653
No 21
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.90 E-value=1.6e-23 Score=211.57 Aligned_cols=227 Identities=18% Similarity=0.181 Sum_probs=164.7
Q ss_pred ccCCCCceEEEEEEecCCC---CCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 457 LTKGAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~---~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
+...+|..+...+| |+.. ...++.|+||++|||++... ...|...+..|+++||.|+++|+||.+..+
T Consensus 24 ~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~------- 95 (283)
T 3bjr_A 24 KQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ------- 95 (283)
T ss_dssp EEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS-------
T ss_pred EeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc-------
Confidence 34445666667778 7642 14567899999999875432 345677888999999999999999955431
Q ss_pred CCCCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCCc-------------eeEEEecCCcch
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK-------------FVAAAARNPLCN 596 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-------------~~~~v~~~~~~~ 596 (715)
........|+.++++++.+.. .++.++|+|+|||+||.+++.++.++|++ ++++++.+|..+
T Consensus 96 --~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~ 173 (283)
T 3bjr_A 96 --PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVIS 173 (283)
T ss_dssp --SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCC
T ss_pred --cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccc
Confidence 011234778999999998753 36778999999999999999999999987 899999999875
Q ss_pred hhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHH
Q 005093 597 LALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE 676 (715)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~ 676 (715)
+........ . ....+. ..+...++...+.++.+|+|+++|++|..+|++++..+++.+++
T Consensus 174 ~~~~~~~~~-------~-----~~~~~~--------~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~ 233 (283)
T 3bjr_A 174 PLLGFPKDD-------A-----TLATWT--------PTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALAT 233 (283)
T ss_dssp TTSBC--------------------CCC--------CCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHH
T ss_pred ccccccccc-------c-----hHHHHH--------HHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHH
Confidence 321110000 0 000000 01234566667778899999999999999999999999999999
Q ss_pred cCCcEEEEEeCCCCccCCCCC------------chHHHHHHHHHHHHHh
Q 005093 677 KGVETKVIVFPNDVHGIERPQ------------SDFESFLNIGLWFKKY 713 (715)
Q Consensus 677 ~g~~~~~~~~~~~~H~~~~~~------------~~~~~~~~i~~wl~~~ 713 (715)
.+.+++++++++++|.+.... ...++.+.+++||+++
T Consensus 234 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 234 AKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp TTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999765322 2246788999999874
No 22
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.90 E-value=7e-23 Score=216.50 Aligned_cols=229 Identities=14% Similarity=0.078 Sum_probs=167.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|.+|.++++.|++ .++.|+||++||++... ..+......|+++||.|+++|+|| +|.+.. ........
T Consensus 135 dg~~i~~~l~~p~~---~~~~P~vl~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG---~G~s~~---~~~~~~~~ 203 (386)
T 2jbw_A 135 DGIPMPVYVRIPEG---PGPHPAVIMLGGLESTK--EESFQMENLVLDRGMATATFDGPG---QGEMFE---YKRIAGDY 203 (386)
T ss_dssp TTEEEEEEEECCSS---SCCEEEEEEECCSSCCT--TTTHHHHHHHHHTTCEEEEECCTT---SGGGTT---TCCSCSCH
T ss_pred CCEEEEEEEEcCCC---CCCCCEEEEeCCCCccH--HHHHHHHHHHHhCCCEEEEECCCC---CCCCCC---CCCCCccH
Confidence 68999999999984 36789999999966543 233344788899999999999999 555411 11111222
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 620 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (715)
..++.+++++|.+++.++.++|+|+|+|+||++++.++.+ |++++++|+. |+.++....... +.. +.....
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~~--~~~-----~~~~~~ 274 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDLE--TPL-----TKESWK 274 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGGS--CHH-----HHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHhc--cHH-----HHHHHH
Confidence 3568889999999887889999999999999999999998 8899999999 887754332100 000 000000
Q ss_pred CCCCCCCChhhH-HHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHH-HHcCCcEEEEEeCCCCccCCCCCc
Q 005093 621 DSFTESPSVEDL-TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQS 698 (715)
Q Consensus 621 ~~~~~~~~~~~~-~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~~~ 698 (715)
..+......... ..+...++...+.++++|+|+++|++|. +++.++.++++++ +. +++++++++++|.+ ...
T Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~~gH~~--~~~ 348 (386)
T 2jbw_A 275 YVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGDHCC--HNL 348 (386)
T ss_dssp HHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCCGGG--GGG
T ss_pred HHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCCCCcCC--ccc
Confidence 001111112333 5566778888889999999999999999 9999999998888 53 58999999999976 334
Q ss_pred hHHHHHHHHHHHHHhcC
Q 005093 699 DFESFLNIGLWFKKYCK 715 (715)
Q Consensus 699 ~~~~~~~i~~wl~~~l~ 715 (715)
..++.+.+.+||+++|+
T Consensus 349 ~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 349 GIRPRLEMADWLYDVLV 365 (386)
T ss_dssp TTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 45789999999999874
No 23
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.90 E-value=7.9e-23 Score=218.52 Aligned_cols=231 Identities=16% Similarity=0.164 Sum_probs=163.2
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhh
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 543 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d 543 (715)
.+.++++.|+ ..++.|+||++||++.. .+...+..|+++||.|+++|+||.++. +........+|
T Consensus 144 ~l~~~l~~P~---~~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~--------~~~~~~~~~~d 208 (422)
T 3k2i_A 144 RVRATLFLPP---GPGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDL--------PNNMDNISLEY 208 (422)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTS--------CSSCSCEETHH
T ss_pred cEEEEEEcCC---CCCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCC--------CCCcccCCHHH
Confidence 6899999997 45678999999997654 234457889999999999999995432 22333456899
Q ss_pred HHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc---CCCCCCceee---eccCC
Q 005093 544 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG---TTDIPDWCYV---ESYGS 617 (715)
Q Consensus 544 ~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~ 617 (715)
+.++++++.++..++.++|+|+||||||.+++.++.++|+ ++++|+++|......... ....+..... .....
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAF 287 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECT
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCc
Confidence 9999999999887888999999999999999999999997 999999888753211000 0000000000 00000
Q ss_pred CC---CCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHH-HHHHHHHHHcCCc-EEEEEeCCCCcc
Q 005093 618 KG---KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHG 692 (715)
Q Consensus 618 ~~---~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~-~~~~~~l~~~g~~-~~~~~~~~~~H~ 692 (715)
.. .......+ ......+....+.++++|+|+++|++|.++|.... ..+.+.+++.+.+ +++++++++||.
T Consensus 288 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~ 362 (422)
T 3k2i_A 288 SGLVDIVDIRNAL-----VGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHY 362 (422)
T ss_dssp TSCEECTTCBCCC-----TTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSC
T ss_pred chhHHHHHHHhhh-----hhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCE
Confidence 00 00000001 00111223344678899999999999999998866 6888999999988 999999999999
Q ss_pred CCCC---------------------------CchHHHHHHHHHHHHHhcC
Q 005093 693 IERP---------------------------QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 693 ~~~~---------------------------~~~~~~~~~i~~wl~~~l~ 715 (715)
+..+ +...++++.+++||+++|+
T Consensus 363 ~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~ 412 (422)
T 3k2i_A 363 IEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLG 412 (422)
T ss_dssp CCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7322 3456789999999999974
No 24
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=7.7e-22 Score=210.43 Aligned_cols=249 Identities=17% Similarity=0.197 Sum_probs=188.3
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccccccc
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVY 94 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 94 (715)
..|+++|+++. ...+|+... +.+..++|||||++|||....+ +...++..+ .+++...+.......
T Consensus 159 ~~i~i~d~~g~--~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d~~tg~~~~l~~~~~~~----- 225 (415)
T 2hqs_A 159 YELRVSDYDGY--NQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASFPRHN----- 225 (415)
T ss_dssp EEEEEEETTSC--SCEEEEEES-----SCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEEEECCSSCE-----
T ss_pred ceEEEEcCCCC--CCEEEeCCC-----CcceeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCcEEEeecCCCcc-----
Confidence 78999887643 445555444 6689999999999999998654 445677666 566666555433333
Q ss_pred CCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce
Q 005093 95 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV 174 (715)
Q Consensus 95 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~ 174 (715)
..++|||||++|+|..... +...||+||+++++.
T Consensus 226 -----~~~~~spdg~~la~~~~~~-----------------------------------------g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 226 -----GAPAFSPDGSKLAFALSKT-----------------------------------------GSLNLYVMDLASGQI 259 (415)
T ss_dssp -----EEEEECTTSSEEEEEECTT-----------------------------------------SSCEEEEEETTTCCE
T ss_pred -----cCEEEcCCCCEEEEEEecC-----------------------------------------CCceEEEEECCCCCE
Confidence 7899999999999976432 236799999999998
Q ss_pred EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce
Q 005093 175 QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV 254 (715)
Q Consensus 175 ~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (715)
+.+ +.....+..+.|||||+. |+|.+... ...+||.+|+ .+++.+
T Consensus 260 ~~l--~~~~~~~~~~~~spdg~~----l~~~s~~~------------g~~~i~~~d~-----------------~~~~~~ 304 (415)
T 2hqs_A 260 RQV--TDGRSNNTEPTWFPDSQN----LAFTSDQA------------GRPQVYKVNI-----------------NGGAPQ 304 (415)
T ss_dssp EEC--CCCSSCEEEEEECTTSSE----EEEEECTT------------SSCEEEEEET-----------------TSSCCE
T ss_pred EeC--cCCCCcccceEECCCCCE----EEEEECCC------------CCcEEEEEEC-----------------CCCCEE
Confidence 888 444456778999999999 99987422 2247999997 777777
Q ss_pred ecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCC
Q 005093 255 NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 255 ~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
.++........++|||||++|++.+... +...|+++|+.+++.+.++... .
T Consensus 305 ~l~~~~~~~~~~~~spdG~~l~~~~~~~--------g~~~i~~~d~~~~~~~~l~~~~---------------------~ 355 (415)
T 2hqs_A 305 RITWEGSQNQDADVSSDGKFMVMVSSNG--------GQQHIAKQDLATGGVQVLSSTF---------------------L 355 (415)
T ss_dssp ECCCSSSEEEEEEECTTSSEEEEEEECS--------SCEEEEEEETTTCCEEECCCSS---------------------S
T ss_pred EEecCCCcccCeEECCCCCEEEEEECcC--------CceEEEEEECCCCCEEEecCCC---------------------C
Confidence 8877666788899999999999998763 2357999999887654443221 1
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeec
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 387 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~ 387 (715)
...+.|+|||+.|++.+...+...||.+|++++..++++...+.+....|+|.
T Consensus 356 ~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 356 DETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp CEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred cCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 34567999999999988888888999999998888888877765666677764
No 25
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.90 E-value=4e-23 Score=215.58 Aligned_cols=231 Identities=19% Similarity=0.249 Sum_probs=159.9
Q ss_pred cccCCCCceEEEEEEe-cCCC--------------------CCCCCCcEEEEEcCCCCCCCCc---cchHHHHHHHhC-C
Q 005093 456 NLTKGAQKPFEAIFVS-SSHK--------------------KDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLSSV-G 510 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~-P~~~--------------------~~~~~~P~vv~iHGg~~~~~~~---~~~~~~~~la~~-G 510 (715)
++...+| +.+.+|. |... ...++.|+||++|||++..... .|...+..|+++ |
T Consensus 68 ~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g 145 (365)
T 3ebl_A 68 IIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSK 145 (365)
T ss_dssp EEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHT
T ss_pred EecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCC
Confidence 3445566 6667787 8642 2346789999999988754433 256677888775 9
Q ss_pred cEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC----CCCCc-eEEEEEeChhHHHHHHHHhhCCC--
Q 005093 511 YSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD-- 583 (715)
Q Consensus 511 ~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~a~~~p~-- 583 (715)
|.|+++|||+++++. ....++|+.++++|+.++. .+|++ +|+|+|+|+||++++.++.+.++
T Consensus 146 ~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~ 214 (365)
T 3ebl_A 146 GVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG 214 (365)
T ss_dssp SEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcC
Confidence 999999999865432 2234789999999999764 57898 99999999999999999987655
Q ss_pred -ceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHH-------------HHhcCchh-hccCCC
Q 005093 584 -KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR-------------FHSKSPIS-HISKVK 648 (715)
Q Consensus 584 -~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~sp~~-~~~~i~ 648 (715)
+++++|+++|+++........ ..... ..+ ........ ....+|+. ....++
T Consensus 215 ~~~~g~vl~~p~~~~~~~~~~~--------~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 280 (365)
T 3ebl_A 215 VKVCGNILLNAMFGGTERTESE--------RRLDG---KYF---VTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLG 280 (365)
T ss_dssp CCCCEEEEESCCCCCSSCCHHH--------HHHTT---TSS---CCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCT
T ss_pred CceeeEEEEccccCCCcCChhh--------hhcCC---Ccc---cCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhc
Confidence 799999999987643111000 00000 000 00000000 01122322 223343
Q ss_pred ----CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC---CCCchHHHHHHHHHHHHHhcC
Q 005093 649 ----TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE---RPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 649 ----~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+|+||+||+.|..+ .++.+++++|+++|++++++++++++|++. ..+...++++.+.+||+++++
T Consensus 281 ~~~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 281 GLPFAKSLIIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp TSCCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCEEEEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 68999999999765 567899999999999999999999999876 234456789999999999875
No 26
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.90 E-value=1.6e-22 Score=195.97 Aligned_cols=201 Identities=20% Similarity=0.261 Sum_probs=157.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC--CCCC-
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVG- 537 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~--~~~~- 537 (715)
+|.++.++++.|++ +.|+||++||++.......+...++.|+++||.|+++|+|| +|.+...... ....
T Consensus 20 ~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~~~~ 91 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLT---QEEEEIDLRTRHLRFDI 91 (223)
T ss_dssp TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSC---HHHHHHHHHHCSSTTCH
T ss_pred CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCC---cCCCCccchhhcccCcH
Confidence 78899999999863 68999999997765433345567888999999999999998 5554322111 0011
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 617 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (715)
....+|+.++++++..+..+|.++++++|||+||.+++.++.++|++++++|+++|..+..
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------- 152 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------------------
Confidence 1226788899999998877888999999999999999999999999999999999864320
Q ss_pred CCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC
Q 005093 618 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 697 (715)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 697 (715)
...+.++++|+|+++|++|..+|.. ..+.+.+.+.+++++++++++|.+..++
T Consensus 153 -----------------------~~~~~~~~~P~l~i~g~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 205 (223)
T 2o2g_A 153 -----------------------PSALPHVKAPTLLIVGGYDLPVIAM----NEDALEQLQTSKRLVIIPRASHLFEEPG 205 (223)
T ss_dssp -----------------------TTTGGGCCSCEEEEEETTCHHHHHH----HHHHHHHCCSSEEEEEETTCCTTCCSTT
T ss_pred -----------------------HHHHhcCCCCEEEEEccccCCCCHH----HHHHHHhhCCCeEEEEeCCCCcccCChH
Confidence 0234567799999999999988632 3445566677899999999999977666
Q ss_pred chHHHHHHHHHHHHHhcC
Q 005093 698 SDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 698 ~~~~~~~~i~~wl~~~l~ 715 (715)
...++.+.+.+||+++|+
T Consensus 206 ~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 206 ALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 667899999999999986
No 27
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.89 E-value=3e-22 Score=201.72 Aligned_cols=221 Identities=19% Similarity=0.213 Sum_probs=149.0
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+..+.||++||.+.+ ...|..+++.|+++||.|+++|+|| ||.+........+ ...++|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s--~~~~~~la~~La~~Gy~Via~Dl~G---hG~S~~~~~~~~~-~~~~~d~~~~~~~l~~~---- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGS--PQSMRFLAEGFARAGYTVATPRLTG---HGTTPAEMAASTA-SDWTADIVAAMRWLEER---- 118 (281)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTT---SSSCHHHHHTCCH-HHHHHHHHHHHHHHHHH----
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEECCCC---CCCCCccccCCCH-HHHHHHHHHHHHHHHhC----
Confidence 345679999995443 4578889999999999999999999 6655432111111 11267888888888765
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-----ccCCCCCCceeeeccCC----CCCCCCCCC-CC
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----VGTTDIPDWCYVESYGS----KGKDSFTES-PS 628 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~ 628 (715)
.++++|+||||||.+++.++.++|++++++|+++|...+... ......... ...... ......... ..
T Consensus 119 ~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 196 (281)
T 4fbl_A 119 CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAE--LPGIGSDIKAEGVKELAYPVTP 196 (281)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSE--EECCCCCCSSTTCCCCCCSEEE
T ss_pred CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHh--hhcchhhhhhHHHHHhhhccCc
Confidence 368999999999999999999999999999999987643211 000001000 000000 000000000 00
Q ss_pred hhhHHHHHhc--CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHH
Q 005093 629 VEDLTRFHSK--SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNI 706 (715)
Q Consensus 629 ~~~~~~~~~~--sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i 706 (715)
......+... .....+.++++|+|+++|++|.++|++.+..+++.+. +.++++++++++||.+..+...+.+.+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~--~~~~~l~~~~~~gH~~~~e~~~e~v~~~i 274 (281)
T 4fbl_A 197 VPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIG--STEKELLWLENSYHVATLDNDKELILERS 274 (281)
T ss_dssp GGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCC--CSSEEEEEESSCCSCGGGSTTHHHHHHHH
T ss_pred hHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCC--CCCcEEEEECCCCCcCccccCHHHHHHHH
Confidence 1111111110 1123567899999999999999999999988888764 35678999999999877666667889999
Q ss_pred HHHHHHh
Q 005093 707 GLWFKKY 713 (715)
Q Consensus 707 ~~wl~~~ 713 (715)
++||++|
T Consensus 275 ~~FL~~H 281 (281)
T 4fbl_A 275 LAFIRKH 281 (281)
T ss_dssp HHHHHTC
T ss_pred HHHHHhC
Confidence 9999986
No 28
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.89 E-value=7.2e-23 Score=204.94 Aligned_cols=240 Identities=11% Similarity=0.066 Sum_probs=163.9
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+|.+++++++.|. +++.|+||++||++.......|...+..|+++||.|+++|+||. |.+...... ....
T Consensus 28 ~~~g~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~---G~s~~~~~~-~~~~ 99 (270)
T 3pfb_A 28 ERDGLQLVGTREEPF----GEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGH---GDSDGKFEN-MTVL 99 (270)
T ss_dssp EETTEEEEEEEEECS----SSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTS---TTSSSCGGG-CCHH
T ss_pred ccCCEEEEEEEEcCC----CCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccc---cCCCCCCCc-cCHH
Confidence 347899999999885 34589999999977664445577788899999999999999994 433211000 0111
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
..++|+.++++++.++. +.++++|+|||+||.+++.++.++|++++++|+++|.................+.......
T Consensus 100 ~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
T 3pfb_A 100 NEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPD 177 (270)
T ss_dssp HHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSCCS
T ss_pred HHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCcccccc
Confidence 23678888899988764 3469999999999999999999999999999999998765432111000000000000000
Q ss_pred CCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc
Q 005093 619 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 698 (715)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 698 (715)
................+...++...+.++++|+|+++|++|..+|.+.+..+.+.+ ..++++++++++|.+. .+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~ 252 (270)
T 3pfb_A 178 RLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY----QNSTLHLIEGADHCFS-DSY 252 (270)
T ss_dssp EEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC----SSEEEEEETTCCTTCC-THH
T ss_pred cccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC----CCCeEEEcCCCCcccC-ccc
Confidence 00000000011223344455666778889999999999999999998888777664 3589999999999876 444
Q ss_pred hHHHHHHHHHHHHHh
Q 005093 699 DFESFLNIGLWFKKY 713 (715)
Q Consensus 699 ~~~~~~~i~~wl~~~ 713 (715)
..++.+.+.+||+++
T Consensus 253 ~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 253 QKNAVNLTTDFLQNN 267 (270)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHhhc
Confidence 567888999999765
No 29
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.89 E-value=1.4e-22 Score=198.35 Aligned_cols=209 Identities=18% Similarity=0.153 Sum_probs=158.7
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhc----
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS---- 531 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~---- 531 (715)
++...+|.++.++++.|+ .++.|+||++||.+.. ...+...+..|+++||.|+++|+||.+..+......
T Consensus 7 ~~~~~~g~~l~~~~~~p~----~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 7 SIQSYDGHTFGALVGSPA----KAPAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp CEECTTSCEECEEEECCS----SCSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred EEecCCCCeEEEEEECCC----CCCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhh
Confidence 445568889999999986 3578999999996554 346777888999999999999999855433210000
Q ss_pred -------CCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC
Q 005093 532 -------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 604 (715)
Q Consensus 532 -------~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~ 604 (715)
..........+|+.++++++.++..++ ++|+++|||+||.+++.++.++| ++++++.+|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-------
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-------
Confidence 000011223678889999998876444 79999999999999999999988 8888877763210
Q ss_pred CCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 605 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
++...+.++++|+|+++|++|..+|.+.+..+++.+++.+ +++++
T Consensus 151 ----------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (236)
T 1zi8_A 151 ----------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVH 195 (236)
T ss_dssp ----------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEE
T ss_pred ----------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEE
Confidence 1234456778999999999999999999999999987655 89999
Q ss_pred EeCCCCccCCCCCc-------hHHHHHHHHHHHHHhcC
Q 005093 685 VFPNDVHGIERPQS-------DFESFLNIGLWFKKYCK 715 (715)
Q Consensus 685 ~~~~~~H~~~~~~~-------~~~~~~~i~~wl~~~l~ 715 (715)
++++++|.+..... ..++++.+.+||+++++
T Consensus 196 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 196 WYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp EETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred EECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 99999998775432 34688999999999875
No 30
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.89 E-value=8.8e-22 Score=194.61 Aligned_cols=203 Identities=17% Similarity=0.231 Sum_probs=157.6
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC---CCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV---SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~---~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
+...+| ++.++++.|. .++.|+||++||.+... ....+...+..|+++||.|+++|+||. |.+.. .
T Consensus 28 ~~~~~g-~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~---G~s~~---~ 96 (249)
T 2i3d_A 28 FNGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSI---GRSQG---E 96 (249)
T ss_dssp EEETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTS---TTCCS---C
T ss_pred EECCCc-eEEEEEEcCC----CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCC---CCCCC---C
Confidence 344466 8999998885 35679999999953221 123456778889999999999999994 43321 1
Q ss_pred CCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
........+|+.++++++.++. .+.++++++|||+||.+++.++.++|+ ++++|+++|..+...
T Consensus 97 ~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-------------- 160 (249)
T 2i3d_A 97 FDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-------------- 160 (249)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--------------
T ss_pred CCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh--------------
Confidence 1122334689999999998885 477799999999999999999999998 999999998754210
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHH-cCCcEEEEEeCCCCcc
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE-KGVETKVIVFPNDVHG 692 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~ 692 (715)
...+.++++|+|+++|++|..+|.+.+..+++.+.. .+.+++++++++++|.
T Consensus 161 ---------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 213 (249)
T 2i3d_A 161 ---------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHF 213 (249)
T ss_dssp ---------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTT
T ss_pred ---------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcc
Confidence 122456789999999999999999999999998875 4557999999999998
Q ss_pred CCCCCchHHHHHHHHHHHHHhcC
Q 005093 693 IERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 693 ~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+. ....++.+.+.+||+++++
T Consensus 214 ~~--~~~~~~~~~i~~fl~~~l~ 234 (249)
T 2i3d_A 214 FN--GKVDELMGECEDYLDRRLN 234 (249)
T ss_dssp CT--TCHHHHHHHHHHHHHHHHT
T ss_pred cc--cCHHHHHHHHHHHHHHhcC
Confidence 76 3566889999999998763
No 31
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.5e-22 Score=217.43 Aligned_cols=234 Identities=14% Similarity=0.166 Sum_probs=160.9
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhh
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 543 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d 543 (715)
.+.+++|.|+ ..++.|+||++||++... +...+..|+++||.|+++|+||.++.. ........+|
T Consensus 160 ~l~~~l~~P~---~~~~~P~Vv~lhG~~~~~----~~~~a~~La~~Gy~Vla~D~rG~~~~~--------~~~~~~~~~d 224 (446)
T 3hlk_A 160 RVRGTLFLPP---EPGPFPGIVDMFGTGGGL----LEYRASLLAGKGFAVMALAYYNYEDLP--------KTMETLHLEY 224 (446)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCSSCSC----CCHHHHHHHTTTCEEEEECCSSSTTSC--------SCCSEEEHHH
T ss_pred eEEEEEEeCC---CCCCCCEEEEECCCCcch----hhHHHHHHHhCCCEEEEeccCCCCCCC--------cchhhCCHHH
Confidence 6899999997 456789999999976542 234578899999999999999954432 2233345899
Q ss_pred HHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc---CCCCCCceee---eccCC
Q 005093 544 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG---TTDIPDWCYV---ESYGS 617 (715)
Q Consensus 544 ~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~ 617 (715)
+.++++++.++..+|.++|+|+||||||.+++.++.++|+ ++++|+++|......... ....+...+. .....
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 9999999999988888999999999999999999999987 999999888653211000 0000000000 00000
Q ss_pred CCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHH-HHHHHHHHHcCCc-EEEEEeCCCCccCCC
Q 005093 618 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHGIER 695 (715)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~-~~~~~~l~~~g~~-~~~~~~~~~~H~~~~ 695 (715)
.....+... ...............+.++++|+|+++|++|.++|.... ..+++.+++.+.+ +++++|++++|.+..
T Consensus 304 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~ 381 (446)
T 3hlk_A 304 DGYADIVDV--LNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381 (446)
T ss_dssp SSCEECTTC--BCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCS
T ss_pred chHHHHHHH--HhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECC
Confidence 000000000 000000011112233677889999999999999998554 6889999999988 899999999998831
Q ss_pred ---------------------------CCchHHHHHHHHHHHHHhcC
Q 005093 696 ---------------------------PQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 696 ---------------------------~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+...++++++++||+++|+
T Consensus 382 p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~ 428 (446)
T 3hlk_A 382 PYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLG 428 (446)
T ss_dssp TTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 11256789999999999874
No 32
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.89 E-value=4.7e-22 Score=205.03 Aligned_cols=227 Identities=15% Similarity=0.208 Sum_probs=162.6
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
++...+| ++.+++|.|++ ...|+||++|||++... ...+...+..|++ .||.|+++|||+++++.
T Consensus 67 ~~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~-------- 133 (326)
T 3ga7_A 67 AVPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR-------- 133 (326)
T ss_dssp EECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC--------
T ss_pred EeecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC--------
Confidence 4455566 89999999973 23499999999885443 3456677888877 89999999999865531
Q ss_pred CCCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCCc------eeEEEecCCcchhhhhccCC
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK------FVAAAARNPLCNLALMVGTT 604 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~------~~~~v~~~~~~~~~~~~~~~ 604 (715)
....++|+.++++|+.++. .+|+++|+|+|+|+||.+++.++.+++++ ++++++.+|+.+.......
T Consensus 134 ---~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~- 209 (326)
T 3ga7_A 134 ---YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSR- 209 (326)
T ss_dssp ---TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHH-
T ss_pred ---CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhH-
Confidence 2234789999999999863 47889999999999999999999877654 8999999997654211000
Q ss_pred CCCCceeeeccCCCCCCCCCCCCChhhHHHHH---------hcCch-----hhccCCCCcEEEEeeCCCCcCCchHHHHH
Q 005093 605 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFH---------SKSPI-----SHISKVKTPTIFLLGAQDLRVPVSNGLQY 670 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~sp~-----~~~~~i~~P~Lii~G~~D~~v~~~~~~~~ 670 (715)
..+... .. .........+. ..+|. ..+.+..+|+||+||+.|.++ .++..+
T Consensus 210 --------~~~~~~----~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~ 274 (326)
T 3ga7_A 210 --------RLFGGA----WD-GLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLL 274 (326)
T ss_dssp --------HHCCCT----TT-TCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHH
T ss_pred --------hhhcCC----CC-CCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHH
Confidence 000000 00 00011111111 11222 123345679999999999998 588999
Q ss_pred HHHHHHcCCcEEEEEeCCCCccCCCCC----chHHHHHHHHHHHHHhc
Q 005093 671 ARALREKGVETKVIVFPNDVHGIERPQ----SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 671 ~~~l~~~g~~~~~~~~~~~~H~~~~~~----~~~~~~~~i~~wl~~~l 714 (715)
+++++++|++++++++++++|++.... ...++++.+.+||+++|
T Consensus 275 ~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 275 HQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999986432 34678999999999886
No 33
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.89 E-value=9.8e-23 Score=211.37 Aligned_cols=242 Identities=14% Similarity=0.174 Sum_probs=167.3
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhh-hcCC-
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL-QSLP- 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~-~~~~- 533 (715)
++.+.+|.++.++++.|++. .++.|+||++||++.... +......|+++||.|+++|+||.+.++.... ...+
T Consensus 72 ~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~---~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~ 146 (337)
T 1vlq_A 72 TFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRG---FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPE 146 (337)
T ss_dssp EEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCC---CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCS
T ss_pred EEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCC---CchhhcchhhCCCEEEEecCCCCCCcccCCCCccccc
Confidence 44556788999999999742 567899999999776532 2233456789999999999999764432100 0000
Q ss_pred ----CCC--------C-------ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 534 ----GKV--------G-------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 534 ----~~~--------~-------~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
..+ . ...++|+.++++++.++..+|.++|+|+|+|+||.+++.++.++| +++++++.+|.
T Consensus 147 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~ 225 (337)
T 1vlq_A 147 GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPF 225 (337)
T ss_dssp SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCC
T ss_pred ccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCc
Confidence 000 0 134789999999999988788899999999999999999999988 58999988885
Q ss_pred ch-hhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 595 CN-LALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 595 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
.. +...........+.....+.. . ...........+...+|...+.++++|+|+++|+.|.++|++++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~ 300 (337)
T 1vlq_A 226 LCHFRRAVQLVDTHPYAEITNFLK----T-HRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNY 300 (337)
T ss_dssp SCCHHHHHHHCCCTTHHHHHHHHH----H-CTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCHHHHHhcCCCcchHHHHHHHH----h-CchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHh
Confidence 43 222211111111100000000 0 00001122233445678778889999999999999999999998888887
Q ss_pred HHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 674 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
++. +++++++++++|.+. ..+..+.+.+||+++|+
T Consensus 301 l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 301 YAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp CCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC
T ss_pred cCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHh
Confidence 753 589999999999863 23567899999998874
No 34
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.89 E-value=2.8e-22 Score=205.96 Aligned_cols=224 Identities=17% Similarity=0.269 Sum_probs=158.4
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~-~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
.+.+++|.|+ ..++.|+||++|||++.... ..+...+..|++ .||.|+++|||+++++. ....+
T Consensus 66 ~i~~~~~~p~---~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAP---GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------FPAAV 131 (322)
T ss_dssp TEEEEEEECT---TCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred CeEEEEEeCC---CCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------CCcHH
Confidence 4788899997 34678999999998865433 345556667765 69999999999865531 23357
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCc----eeEEEecCCcchhhhhccCCCCCCceeeeccCC
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 617 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (715)
+|+.++++|+.++ .+|+++|+|+|+|+||++++.++.+.+++ ++++++++|+.+....... + .. ...
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-----~--~~-~~~ 202 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDS-----F--KT-RAE 202 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTH-----H--HH-TTT
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcC-----H--HH-hCc
Confidence 9999999999998 57899999999999999999999876654 9999999998875321100 0 00 000
Q ss_pred CCCCCCCCCCChh-hHHHH--------HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 618 KGKDSFTESPSVE-DLTRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 618 ~~~~~~~~~~~~~-~~~~~--------~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
...+....... ....+ ...+|+...-...+|+||++|+.|.++ .++..++++++++|++++++++++
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g 278 (322)
T 3fak_A 203 --ADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDD 278 (322)
T ss_dssp --TCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred --cCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 00000000000 00111 123444222223369999999999875 688899999999999999999999
Q ss_pred CCccCCC----CCchHHHHHHHHHHHHHhc
Q 005093 689 DVHGIER----PQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 689 ~~H~~~~----~~~~~~~~~~i~~wl~~~l 714 (715)
++|++.. .....++++.+.+||+++|
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 279 MIHVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 9998763 2334678899999999876
No 35
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.88 E-value=1.6e-22 Score=204.78 Aligned_cols=226 Identities=16% Similarity=0.208 Sum_probs=163.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|.++.++++.|. +.|+||++||++.. ...|...+..|+++||.|+++|+|| +|.+...... ......
T Consensus 14 ~g~~l~~~~~~p~------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~g~s~~~~~~-~~~~~~ 81 (290)
T 3ksr_A 14 GQDELSGTLLTPT------GMPGVLFVHGWGGS--QHHSLVRAREAVGLGCICMTFDLRG---HEGYASMRQS-VTRAQN 81 (290)
T ss_dssp TTEEEEEEEEEEE------SEEEEEEECCTTCC--TTTTHHHHHHHHTTTCEEECCCCTT---SGGGGGGTTT-CBHHHH
T ss_pred CCeEEEEEEecCC------CCcEEEEeCCCCCC--cCcHHHHHHHHHHCCCEEEEeecCC---CCCCCCCccc-ccHHHH
Confidence 6789999999985 68999999997655 4567788899999999999999999 5544322111 111223
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeec-cC-CC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES-YG-SK 618 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 618 (715)
.+|+.++++++.+++.+|.++|+|+|||+||.+++.++.++| ++++++++|...... .|..... +. ..
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~--------~~~~~~~~~~~~~ 151 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDA--------HWDQPKVSLNADP 151 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSS--------CTTSBHHHHHHST
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhh--------hhhcccccccCCh
Confidence 689999999999887788899999999999999999999887 778888887653211 0100000 00 00
Q ss_pred CCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc
Q 005093 619 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 698 (715)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 698 (715)
....+..... .....++...+.++++|+|+++|+.|..++.+.+..+++.+...+ +++++++++++|.+.....
T Consensus 152 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~ 225 (290)
T 3ksr_A 152 DLMDYRRRAL-----APGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHALSVKEH 225 (290)
T ss_dssp THHHHTTSCC-----CGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTTCCSHHH
T ss_pred hhhhhhhhhh-----hhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCCCCcchH
Confidence 0000000000 011122334566788999999999999999999999999887655 7899999999998876656
Q ss_pred hHHHHHHHHHHHHHhc
Q 005093 699 DFESFLNIGLWFKKYC 714 (715)
Q Consensus 699 ~~~~~~~i~~wl~~~l 714 (715)
...+.+.+.+||++++
T Consensus 226 ~~~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 226 QQEYTRALIDWLTEMV 241 (290)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6788899999998875
No 36
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.88 E-value=2.2e-22 Score=209.46 Aligned_cols=241 Identities=14% Similarity=0.140 Sum_probs=164.6
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCC-
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG- 534 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~- 534 (715)
++...+|.++.++++.|++ .++.|+||++||++.... .|.... .++++||.|+++|+||.++++.........
T Consensus 86 ~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~--~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~ 159 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSG--DWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVTGNT 159 (346)
T ss_dssp EEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSC--CSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCSSCC
T ss_pred EEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCC--Chhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccCCCC
Confidence 5566688999999999973 577899999999776543 343333 567999999999999966543322100000
Q ss_pred -----------CCC----ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchh-h
Q 005093 535 -----------KVG----SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-A 598 (715)
Q Consensus 535 -----------~~~----~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~-~ 598 (715)
... ...++|+.++++++.....+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|.... .
T Consensus 160 ~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~ 238 (346)
T 3fcy_A 160 LNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYK 238 (346)
T ss_dssp SBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHH
T ss_pred cCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHH
Confidence 000 0125899999999998877888999999999999999999999988 9999999986532 1
Q ss_pred hhccCC-CCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHc
Q 005093 599 LMVGTT-DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 677 (715)
Q Consensus 599 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~ 677 (715)
...... ....+.....+... ..............+...++...+.++++|+|+++|+.|.++|++.+.++++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~- 315 (346)
T 3fcy_A 239 RVWDLDLAKNAYQEITDYFRL--FDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS- 315 (346)
T ss_dssp HHHHTTCCCGGGHHHHHHHHH--HCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-
T ss_pred HHhhccccccchHHHHHHHHh--cCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-
Confidence 111110 00000000000000 00000011222333445566677889999999999999999999888777776643
Q ss_pred CCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 678 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 678 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++++++++++|.+. .++.+.+.+||++.
T Consensus 316 --~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 316 --KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp --SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred --CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 689999999999886 35678899999874
No 37
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.88 E-value=2.5e-21 Score=185.55 Aligned_cols=195 Identities=13% Similarity=0.159 Sum_probs=146.2
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCC---CCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP---HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~---~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
.+...+| ++.++++.|+ ..++.|+||++||++ +......+...+..|+++||.|+++|+||.+. +..
T Consensus 10 ~~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~---s~~--- 79 (208)
T 3trd_A 10 LIQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGK---SQG--- 79 (208)
T ss_dssp EEECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTT---CCS---
T ss_pred EEECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCC---CCC---
Confidence 3455577 9999999986 345789999999953 22223456678889999999999999999443 321
Q ss_pred CCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
.........+|+.++++++.++ .+.++++++|||+||.+++.++ .+| +++++|+++|..+..
T Consensus 80 ~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~-------------- 141 (208)
T 3trd_A 80 RYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE-------------- 141 (208)
T ss_dssp CCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG--------------
T ss_pred CccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC--------------
Confidence 1122334578999999999987 3558999999999999999999 667 899999998865100
Q ss_pred eccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc
Q 005093 613 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
+...+..+++|+|+++|++|..+|++.+.++++.+.. .++++++++++|.
T Consensus 142 ---------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~ 191 (208)
T 3trd_A 142 ---------------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS---PVEFVVMSGASHF 191 (208)
T ss_dssp ---------------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS---CCEEEEETTCCSS
T ss_pred ---------------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC---ceEEEEeCCCCCc
Confidence 0122344578999999999999999988887776643 3889999999998
Q ss_pred CCCCCchHHHHHHHHHHH
Q 005093 693 IERPQSDFESFLNIGLWF 710 (715)
Q Consensus 693 ~~~~~~~~~~~~~i~~wl 710 (715)
+... ..++.+.+.+||
T Consensus 192 ~~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 192 FHGR--LIELRELLVRNL 207 (208)
T ss_dssp CTTC--HHHHHHHHHHHH
T ss_pred cccc--HHHHHHHHHHHh
Confidence 7643 245666666665
No 38
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.87 E-value=1.6e-21 Score=204.82 Aligned_cols=247 Identities=13% Similarity=0.087 Sum_probs=164.6
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 534 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~-~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~ 534 (715)
++.+.+|..+.++++.|++ .+.++.|+||++||++.. ...+. ..+..|+++||.|+++|+||.+...... ...
T Consensus 72 ~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~ 145 (367)
T 2hdw_A 72 TFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAV--KEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQP---RNV 145 (367)
T ss_dssp EEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCC--TTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSS---SSC
T ss_pred EEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCc--chhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcC---ccc
Confidence 4455678999999999985 235678999999997654 33444 3678899999999999999954332111 111
Q ss_pred CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-cCCC--------
Q 005093 535 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-GTTD-------- 605 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-~~~~-------- 605 (715)
.......+|+.++++++.++..++.++|+++|||+||.+++.++.++| .++++|+.+|........ +...
T Consensus 146 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 224 (367)
T 2hdw_A 146 ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRT 224 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHH
Confidence 112245789999999999987788899999999999999999999988 699999998863211000 0000
Q ss_pred ------------------------CCCce---------eeeccCCCC--CCC---CCCCCChhhHHHHHhcCchhhccCC
Q 005093 606 ------------------------IPDWC---------YVESYGSKG--KDS---FTESPSVEDLTRFHSKSPISHISKV 647 (715)
Q Consensus 606 ------------------------~~~~~---------~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~sp~~~~~~i 647 (715)
.+... ....+.... ... ............+...++...+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 304 (367)
T 2hdw_A 225 RTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEI 304 (367)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGG
T ss_pred HHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhh
Confidence 00000 000000000 000 0000001223445566777788899
Q ss_pred C-CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 648 K-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 648 ~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+ +|+|+++|++|. ++..+.+++++ .+.+++++++++++|.+........+.+.+.+||+++|
T Consensus 305 ~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 305 SPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp TTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred cCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 9 999999999998 66777666655 57789999999999974322222126789999999875
No 39
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.87 E-value=3.4e-21 Score=200.73 Aligned_cols=228 Identities=17% Similarity=0.193 Sum_probs=158.6
Q ss_pred CceEEEEEEecCCCC--------------CCCCCcEEEEEcCCCCCCCCc---cchHHHHHHH-hCCcEEEEEcCCCCCC
Q 005093 462 QKPFEAIFVSSSHKK--------------DCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLS-SVGYSLLIVNYRGSLG 523 (715)
Q Consensus 462 g~~l~~~l~~P~~~~--------------~~~~~P~vv~iHGg~~~~~~~---~~~~~~~~la-~~G~~vi~~d~rG~~~ 523 (715)
+..+.+.+|.|++.. ..++.|+||++|||++..... .|...+..|+ ++||.|+++||||.++
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 159 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPE 159 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 445777899998542 246789999999988654332 2667788888 7899999999999654
Q ss_pred CchhhhhcCCCCCCccchhhHHHHHHHHHHcC----CCCCc-eEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcc
Q 005093 524 FGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLC 595 (715)
Q Consensus 524 ~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~ 595 (715)
+. ....++|+.++++|+.++. .+|.+ +|+|+|||+||.+++.++.++++ +++++|+++|++
T Consensus 160 ~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~ 228 (351)
T 2zsh_A 160 NP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMF 228 (351)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCC
T ss_pred CC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCcc
Confidence 31 1234789999999998864 47888 99999999999999999998888 899999999987
Q ss_pred hhhhhccC----CCCCCc--e----eeeccCCCCCCCCCCCCChhhHHHHHhcCch----hhccCCCC-cEEEEeeCCCC
Q 005093 596 NLALMVGT----TDIPDW--C----YVESYGSKGKDSFTESPSVEDLTRFHSKSPI----SHISKVKT-PTIFLLGAQDL 660 (715)
Q Consensus 596 ~~~~~~~~----~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~----~~~~~i~~-P~Lii~G~~D~ 660 (715)
+....... ...... . +...+.... .. ......+|+ ..+.++.+ |+|+++|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~ 297 (351)
T 2zsh_A 229 GGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEG-------ED----REHPACNPFSPRGKSLEGVSFPKSLVVVAGLDL 297 (351)
T ss_dssp CCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTT-------CC----TTSTTTCTTSTTSCCCTTCCCCEEEEEEETTST
T ss_pred CCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCC-------CC----CCCcccCCCCCCccchhhCCCCCEEEEEcCCCc
Confidence 53211000 000000 0 000000000 00 000011221 23444555 99999999999
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC---CCchHHHHHHHHHHHHHh
Q 005093 661 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---PQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 661 ~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~wl~~~ 713 (715)
+++ .+..+++++++.+.+++++++++++|.+.. .+...++++.+.+||+++
T Consensus 298 ~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 298 IRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp THH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred chH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 875 678899999999999999999999998765 244567888999999753
No 40
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.87 E-value=1e-20 Score=196.41 Aligned_cols=240 Identities=15% Similarity=0.215 Sum_probs=164.2
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
.+...+|..+.+.++.|. +++.|+||++||++.. ...|...+..|+++||.|+++|+|| +|.+........
T Consensus 39 ~~~~~dg~~l~~~~~~p~----~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVG---HGQSEGERMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTT---STTSCSSTTCCS
T ss_pred eEEccCCeEEEEEEeCCC----CCCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCC---CcCCCCcCCCcC
Confidence 345668999999999885 3567999999997655 4578888999999999999999999 444432111111
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC-----------
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------- 604 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~----------- 604 (715)
.....++|+.++++++... .+..+|+|+|||+||.+++.++.++|++++++|+++|...........
T Consensus 110 ~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNL 187 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHH
Confidence 2222378999999999887 456799999999999999999999999999999999976432110000
Q ss_pred CCCCceeeeccCCCCCCCCCCCCChhhHHHHH---------------------hcCchhhccCCCCcEEEEeeCCCCcCC
Q 005093 605 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFH---------------------SKSPISHISKVKTPTIFLLGAQDLRVP 663 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~sp~~~~~~i~~P~Lii~G~~D~~v~ 663 (715)
....+.. .... ..... ........+. ..+....+.++++|+|+++|++|.+++
T Consensus 188 ~~~~~~~-~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~ 261 (342)
T 3hju_A 188 VLPNLSL-GPID----SSVLS-RNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 261 (342)
T ss_dssp HCTTCBC-CCCC----GGGSC-SCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSC
T ss_pred hcccccc-Cccc----ccccc-cchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccC
Confidence 0000000 0000 00000 0001111110 011124567889999999999999999
Q ss_pred chHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc--hHHHHHHHHHHHHHhc
Q 005093 664 VSNGLQYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 714 (715)
Q Consensus 664 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~wl~~~l 714 (715)
.+.+..+++.+.. ..+++++++++||.+..... ..+++..+++||++++
T Consensus 262 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 262 SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 9888888777642 35889999999998765443 4467788999998865
No 41
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=1.6e-21 Score=200.15 Aligned_cols=241 Identities=17% Similarity=0.158 Sum_probs=163.1
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC--
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~-- 533 (715)
++...+|.++.++++.|++ .++.|+||++||++... ...+.. ...|+++||.|+++|+||.+++.........
T Consensus 60 ~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~-~~~~~~-~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~ 134 (318)
T 1l7a_A 60 TYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASY-DGEIHE-MVNWALHGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp EEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCS-GGGHHH-HHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred EEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCC-CCCccc-ccchhhCCcEEEEecCCCCCCCCCcccccCCcc
Confidence 4445578899999999974 56789999999977541 123333 3477889999999999996655433210000
Q ss_pred -----CCC-------CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch-hhhh
Q 005093 534 -----GKV-------GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LALM 600 (715)
Q Consensus 534 -----~~~-------~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~-~~~~ 600 (715)
... ....++|+.++++++.++..+|.++|+++|||+||.+++.++..+|+ ++++++.+|... ....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~ 213 (318)
T 1l7a_A 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA 213 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH
T ss_pred ccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHH
Confidence 000 01237899999999999877888999999999999999999998876 777777888543 2221
Q ss_pred ccCCCCCCceeeeccCCCCCCCCCCCC--ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC
Q 005093 601 VGTTDIPDWCYVESYGSKGKDSFTESP--SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 678 (715)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g 678 (715)
........+.....+.. .. ..+ ...........++...+.++++|+|+++|+.|..+|++.+..+++++..
T Consensus 214 ~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-- 286 (318)
T 1l7a_A 214 IDVALEQPYLEINSFFR----RN-GSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-- 286 (318)
T ss_dssp HHHCCSTTTTHHHHHHH----HS-CCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS--
T ss_pred HhcCCcCccHHHHHHHh----cc-CCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC--
Confidence 11111111100000000 00 000 0011122334456677888999999999999999999988888877643
Q ss_pred CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 679 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+++++++++++|.. ..+..+.+.+||+++|+
T Consensus 287 -~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 287 -KKELKVYRYFGHEY-----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp -SEEEEEETTCCSSC-----CHHHHHHHHHHHHHHHC
T ss_pred -CeeEEEccCCCCCC-----cchhHHHHHHHHHHHhC
Confidence 48999999999983 24678999999999875
No 42
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.87 E-value=9.7e-22 Score=198.22 Aligned_cols=234 Identities=14% Similarity=0.089 Sum_probs=154.6
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHH---HHHHHhCCcEEEEEcC--CCCCCCchh------
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNY--RGSLGFGEE------ 527 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~---~~~la~~G~~vi~~d~--rG~~~~g~~------ 527 (715)
...|.++...+|.|+++. .+++|+||++||+++.. ..|... .+.++++||.|+++|+ ||.+..|..
T Consensus 24 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g 100 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTE--QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFG 100 (282)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CC
T ss_pred hhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcchHHHHhhcCCeEEEEeccccCcccccccccccccc
Confidence 346788999999998643 36899999999977653 334333 5778899999999999 776554332
Q ss_pred ----hhhcCCCCC-C--ccchhhHH-HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh
Q 005093 528 ----ALQSLPGKV-G--SQDVNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 599 (715)
Q Consensus 528 ----~~~~~~~~~-~--~~~~~d~~-~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 599 (715)
+........ . .....++. ++++++.+...+|+++|+|+|+|+||++++.++.++|++++++++++|+++...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~ 180 (282)
T 3fcx_A 101 TGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180 (282)
T ss_dssp CCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGG
T ss_pred CCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCccc
Confidence 110000000 0 01122233 445555545557889999999999999999999999999999999999876432
Q ss_pred hccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhcc---CCCCcEEEEeeCCCCcCCchH--HHHHHHHH
Q 005093 600 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHIS---KVKTPTIFLLGAQDLRVPVSN--GLQYARAL 674 (715)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~---~i~~P~Lii~G~~D~~v~~~~--~~~~~~~l 674 (715)
..... ..+...++. ....+...+|...+. .+.+|+|++||+.|.++|..+ +.++++++
T Consensus 181 ~~~~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l 243 (282)
T 3fcx_A 181 CPWGK----KAFSGYLGT-------------DQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAAC 243 (282)
T ss_dssp SHHHH----HHHHHHHC----------------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHH
T ss_pred CchhH----HHHHHhcCC-------------chhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHH
Confidence 10000 000000000 011122334444333 447999999999999986554 56899999
Q ss_pred HHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 675 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 675 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
++.+.+++++++++++|.+.. ....+.+.++|+.++|+
T Consensus 244 ~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 244 TEKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HHcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 999999999999999998753 23567788899988875
No 43
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.87 E-value=2.3e-20 Score=189.51 Aligned_cols=240 Identities=15% Similarity=0.213 Sum_probs=162.9
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
.+...+|..++++++.|. +++.|+||++||.+.. ...|...+..|+++||.|+++|+|| +|.+........
T Consensus 21 ~~~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVG---HGQSEGERMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTT---STTSCSSTTCCS
T ss_pred eEecCCCeEEEEEEeccC----CCCCeEEEEECCCCch--hhHHHHHHHHHHhCCCcEEEeCCCC---CCCCCCCCCCCC
Confidence 345668899999999875 3567999999997654 4578888999999999999999999 444432111111
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-----------CC
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TT 604 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-----------~~ 604 (715)
.....++|+.++++++... .+..+++++|||+||.+++.++.++|++++++|+++|......... ..
T Consensus 92 ~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 1222367888888888876 3457899999999999999999999999999999999764321100 00
Q ss_pred CCCCceeeeccCCCCCCCCCCCCChhhHHHHH---------------------hcCchhhccCCCCcEEEEeeCCCCcCC
Q 005093 605 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFH---------------------SKSPISHISKVKTPTIFLLGAQDLRVP 663 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~sp~~~~~~i~~P~Lii~G~~D~~v~ 663 (715)
....... .... .... .........+. .......+.++++|+|+++|++|..++
T Consensus 170 ~~~~~~~-~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 243 (303)
T 3pe6_A 170 VLPNLSS-GPID----SSVL-SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 243 (303)
T ss_dssp TCCSCCC-CCCC----GGGT-CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBC
T ss_pred hcccccC-Cccc----hhhh-hcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCC
Confidence 0000000 0000 0000 00001111110 001124567889999999999999999
Q ss_pred chHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc--hHHHHHHHHHHHHHhc
Q 005093 664 VSNGLQYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 714 (715)
Q Consensus 664 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~wl~~~l 714 (715)
.+.+..+++.+. +..+++++++++||.+..... ..+.+..+++||++++
T Consensus 244 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 244 SKGAYLLMELAK--SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHHHHHHCC--CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhcc--cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 988888877764 235889999999998765443 4567888999999875
No 44
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.87 E-value=2.3e-21 Score=195.24 Aligned_cols=233 Identities=11% Similarity=0.056 Sum_probs=158.5
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCC-----------Cc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLG-----------FG 525 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~-----------~g 525 (715)
..|.++...+|.|++++..+++|+||++||++... ..|.. ....+++.|+.|+++|.++.+. .|
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g 103 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD--ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQG 103 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS--SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTT
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh--hHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccC
Confidence 46788999999999776678899999999977653 23333 3456678899999999875321 11
Q ss_pred hhhhhcCCC-CCC-ccc-hhhH-HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc
Q 005093 526 EEALQSLPG-KVG-SQD-VNDV-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 601 (715)
Q Consensus 526 ~~~~~~~~~-~~~-~~~-~~d~-~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 601 (715)
.++...... .+. ... ...+ .++++++.+...+ +++++|+|||+||++++.++.++|++|+++++++|.++.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~ 182 (280)
T 3i6y_A 104 AGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCP 182 (280)
T ss_dssp CCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSH
T ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCc
Confidence 111110000 000 001 2222 2445555555434 5899999999999999999999999999999999987643210
Q ss_pred cCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC--CcEEEEeeCCCCcCCchH-HHHHHHHHHHcC
Q 005093 602 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSN-GLQYARALREKG 678 (715)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~v~~~~-~~~~~~~l~~~g 678 (715)
... ..+...++. ....+...+|...+.+++ +|+|++||+.|.+++... +.++++++++.|
T Consensus 183 ~~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g 245 (280)
T 3i6y_A 183 WGQ----KAFTAYLGK-------------DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNN 245 (280)
T ss_dssp HHH----HHHHHHHCS-------------CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTT
T ss_pred hHH----HHHHHhcCC-------------chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcC
Confidence 000 000000010 112233556666666554 899999999999998654 789999999999
Q ss_pred CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 679 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+++++++++++|.+.. ....+.++++|+.++|+
T Consensus 246 ~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 246 YPLELRSHEGYDHSYYF---IASFIEDHLRFHSNYLN 279 (280)
T ss_dssp CCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHT
T ss_pred CCceEEEeCCCCccHHH---HHHhHHHHHHHHHhhcc
Confidence 99999999999998742 33567889999999875
No 45
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.87 E-value=6.7e-21 Score=184.29 Aligned_cols=200 Identities=12% Similarity=0.093 Sum_probs=150.9
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC---CCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV---SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~---~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
+...+| .+.++++.|++. ..++.|+||++||++... ....+...+..|+++||.|+++|+||.+.....
T Consensus 15 ~~~~~g-~~~~~~~~p~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------ 86 (220)
T 2fuk_A 15 LDGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS------ 86 (220)
T ss_dssp EEETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC------
T ss_pred EeCCCC-eEEEEEEeCCCC-CccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------
Confidence 344566 899999999731 015689999999964321 223456778889999999999999994432211
Q ss_pred CCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
........+|+.++++++.++. +.++++++|||+||.+++.++.++ +++++|+++|......
T Consensus 87 ~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~-------------- 148 (220)
T 2fuk_A 87 FDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD-------------- 148 (220)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC--------------
T ss_pred cccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh--------------
Confidence 1223345789999999999884 667999999999999999999886 8999999998764211
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
...+. ...|+|+++|++|..+|.+.+.++++.+. .+++++++++++|.+
T Consensus 149 ---------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~ 197 (220)
T 2fuk_A 149 ---------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFF 197 (220)
T ss_dssp ---------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTC
T ss_pred ---------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCcee
Confidence 00011 14789999999999999988888777663 458899999999987
Q ss_pred CCCCchHHHHHHHHHHHHHhcC
Q 005093 694 ERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.. + ..++.+.+.+||+++|+
T Consensus 198 ~~-~-~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 198 HR-K-LIDLRGALQHGVRRWLP 217 (220)
T ss_dssp TT-C-HHHHHHHHHHHHGGGCS
T ss_pred hh-h-HHHHHHHHHHHHHHHhh
Confidence 65 3 45788999999999874
No 46
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.87 E-value=6.3e-21 Score=190.02 Aligned_cols=188 Identities=15% Similarity=0.150 Sum_probs=149.1
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHH
Q 005093 466 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 545 (715)
Q Consensus 466 ~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~ 545 (715)
.+.++.|... ..++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+.... ....|+.
T Consensus 40 ~~~l~~p~~~-~~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~------------~~~~d~~ 104 (262)
T 1jfr_A 40 GGTIYYPTST-ADGTFGAVVISPGFTAY--QSSIAWLGPRLASQGFVVFTIDTNTTLDQPD------------SRGRQLL 104 (262)
T ss_dssp CEEEEEESCC-TTCCEEEEEEECCTTCC--GGGTTTHHHHHHTTTCEEEEECCSSTTCCHH------------HHHHHHH
T ss_pred ceeEEecCCC-CCCCCCEEEEeCCcCCC--chhHHHHHHHHHhCCCEEEEeCCCCCCCCCc------------hhHHHHH
Confidence 4567788642 34678999999996654 4467778889999999999999999443211 1256888
Q ss_pred HHHHHHHH----cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCC
Q 005093 546 TAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 621 (715)
Q Consensus 546 ~~i~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (715)
++++++.+ ...++.++++|+|||+||.+++.++.++|+ ++++|+++|...
T Consensus 105 ~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 105 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------
Confidence 89999987 334677899999999999999999999887 899998887421
Q ss_pred CCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchH-HHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchH
Q 005093 622 SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIERPQSDF 700 (715)
Q Consensus 622 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 700 (715)
...+.++++|+|+++|++|..++.+. +..+++.+. .+.+++++++++++|.+..... .
T Consensus 159 -------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~H~~~~~~~-~ 217 (262)
T 1jfr_A 159 -------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLP-GSLDKAYLELRGASHFTPNTSD-T 217 (262)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSC-TTSCEEEEEETTCCTTGGGSCC-H
T ss_pred -------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhh-cCCCceEEEeCCCCcCCcccch-H
Confidence 12334577999999999999999998 999998884 3567899999999998775543 5
Q ss_pred HHHHHHHHHHHHhcC
Q 005093 701 ESFLNIGLWFKKYCK 715 (715)
Q Consensus 701 ~~~~~i~~wl~~~l~ 715 (715)
++.+.+.+||+++++
T Consensus 218 ~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 218 TIAKYSISWLKRFID 232 (262)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 789999999998864
No 47
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.86 E-value=4.4e-21 Score=195.70 Aligned_cols=190 Identities=16% Similarity=0.172 Sum_probs=151.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|.. .+.+|.|.. ..+.|+||++||++.. ...|...+..|+++||.|+++|+||.+.... ..
T Consensus 80 ~g~~-~~~~~~p~~---~~~~p~vv~~HG~~~~--~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~------------~~ 141 (306)
T 3vis_A 80 DGFG-GGTIYYPRE---NNTYGAIAISPGYTGT--QSSIAWLGERIASHGFVVIAIDTNTTLDQPD------------SR 141 (306)
T ss_dssp SSSC-CEEEEEESS---CSCEEEEEEECCTTCC--HHHHHHHHHHHHTTTEEEEEECCSSTTCCHH------------HH
T ss_pred CCCc-ceEEEeeCC---CCCCCEEEEeCCCcCC--HHHHHHHHHHHHhCCCEEEEecCCCCCCCcc------------hH
Confidence 4443 356778873 3378999999996644 4567788899999999999999999443211 12
Q ss_pred hhhHHHHHHHHHHc------CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 541 VNDVLTAIDHVIDM------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 541 ~~d~~~~i~~l~~~------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
.+|+.++++++.+. ..++.++|+++|||+||.+++.++.++|+ ++++|+++|...
T Consensus 142 ~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------ 202 (306)
T 3vis_A 142 ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------ 202 (306)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------
T ss_pred HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------
Confidence 57888999999887 66788999999999999999999999887 899998887432
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCch-HHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
...+.++++|+|+++|++|..+|.+ ++..+++.++..+ +++++++++++|.+
T Consensus 203 --------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~ 255 (306)
T 3vis_A 203 --------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFA 255 (306)
T ss_dssp --------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTG
T ss_pred --------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccc
Confidence 0123457799999999999999998 6889988887655 88999999999987
Q ss_pred CCCCchHHHHHHHHHHHHHhcC
Q 005093 694 ERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
..... .++.+.+.+||+++++
T Consensus 256 ~~~~~-~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 256 PNITN-KTIGMYSVAWLKRFVD 276 (306)
T ss_dssp GGSCC-HHHHHHHHHHHHHHHS
T ss_pred hhhch-hHHHHHHHHHHHHHcc
Confidence 65544 5788999999999874
No 48
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.86 E-value=4.4e-21 Score=196.34 Aligned_cols=230 Identities=17% Similarity=0.196 Sum_probs=161.7
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHhC-CcEEEEEcCCCCCCCchhhhhcCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPG 534 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~-~~~~~~~~~~~la~~-G~~vi~~d~rG~~~~g~~~~~~~~~ 534 (715)
+...+| ++.+++|.|++. .++.|+||++|||++.. ....|...+..|+++ ||.|+++||||.+++.
T Consensus 53 i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~--------- 120 (310)
T 2hm7_A 53 MDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK--------- 120 (310)
T ss_dssp EEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC---------
T ss_pred eccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCC---------
Confidence 344455 899999999742 46789999999987543 344677788888875 9999999999965532
Q ss_pred CCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhhccCCCCC
Q 005093 535 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIP 607 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~~~~~~~~ 607 (715)
.....+|+.++++|+.+.. .+|.++|+|+|||+||.+++.++.++|+ +++++|+++|..+...... ..
T Consensus 121 --~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~---~~ 195 (310)
T 2hm7_A 121 --FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHP---PA 195 (310)
T ss_dssp --TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSC---CH
T ss_pred --CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccC---Cc
Confidence 1234789999999998874 3678899999999999999999987765 6999999999876431000 00
Q ss_pred CceeeeccCCCCCCCCCCCCChhhHHH----H---------HhcCchhh--ccCCCCcEEEEeeCCCCcCCchHHHHHHH
Q 005093 608 DWCYVESYGSKGKDSFTESPSVEDLTR----F---------HSKSPISH--ISKVKTPTIFLLGAQDLRVPVSNGLQYAR 672 (715)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~sp~~~--~~~i~~P~Lii~G~~D~~v~~~~~~~~~~ 672 (715)
.+ ..+.. ... ........ + ...+|... +..+ +|+|+++|++|.++ .++..+++
T Consensus 196 ~~---~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~ 263 (310)
T 2hm7_A 196 SI---EENAE---GYL---LTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAE 263 (310)
T ss_dssp HH---HHTSS---SSS---SCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHH
T ss_pred ch---hhcCC---CCC---CCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHH
Confidence 00 00000 000 00000000 0 01233321 2233 49999999999987 67888999
Q ss_pred HHHHcCCcEEEEEeCCCCccCCC----CCchHHHHHHHHHHHHHhcC
Q 005093 673 ALREKGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 673 ~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 715 (715)
++++.|.+++++++++++|.+.. .+...++.+.+.+||+++|+
T Consensus 264 ~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 264 ALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998763 12335788999999999875
No 49
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.86 E-value=1.1e-21 Score=218.24 Aligned_cols=254 Identities=14% Similarity=0.179 Sum_probs=171.6
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC----C-CCccchH-HH---HHHHhCCcEEEEEcCCCCCCCch
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS----V-SLSSYSK-SL---AFLSSVGYSLLIVNYRGSLGFGE 526 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~----~-~~~~~~~-~~---~~la~~G~~vi~~d~rG~~~~g~ 526 (715)
.+...||.+|+++++.|++ .+++|+||++||.+.. . ....|.. .. +.|+++||+|+++|+||+++++.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 4556689999999999974 3678999999984322 1 1112221 22 78999999999999999887766
Q ss_pred hhhhcCC--CCCCc---cchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh-
Q 005093 527 EALQSLP--GKVGS---QDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL- 599 (715)
Q Consensus 527 ~~~~~~~--~~~~~---~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~- 599 (715)
.+....+ ..+.. .+.+|+.++++||.++ +..+ .||+++|+||||++++.++..+|++++++|+.+|+.++..
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~~~~ 184 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMG 184 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCTTTT
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccccccc
Confidence 5432211 11222 6789999999999998 6665 5999999999999999999888999999999999988422
Q ss_pred -hc---cCCCCC--CceeeeccC-----------CCCCC-------------CC-C-CCCChh-------hHHHHHhcCc
Q 005093 600 -MV---GTTDIP--DWCYVESYG-----------SKGKD-------------SF-T-ESPSVE-------DLTRFHSKSP 640 (715)
Q Consensus 600 -~~---~~~~~~--~~~~~~~~~-----------~~~~~-------------~~-~-~~~~~~-------~~~~~~~~sp 640 (715)
.. +..... .|.+..... ..... .+ . ..+.+. ..+.|...||
T Consensus 185 ~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp 264 (615)
T 1mpx_A 185 DDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQAL 264 (615)
T ss_dssp SSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCH
T ss_pred cccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcCh
Confidence 11 000000 000000000 00000 00 0 000000 1134557789
Q ss_pred hhhccC--CCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCC---cEEEEEeCCCCccCCC------------CCchHH-H
Q 005093 641 ISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKGV---ETKVIVFPNDVHGIER------------PQSDFE-S 702 (715)
Q Consensus 641 ~~~~~~--i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~~~------------~~~~~~-~ 702 (715)
..++++ |++|+|++||..|.. +..++.+++++|+++|. +.++++.|. +|+... .+.... .
T Consensus 265 ~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 342 (615)
T 1mpx_A 265 DKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEGDTARQFR 342 (615)
T ss_dssp HHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccCcccchhhh
Confidence 989999 999999999999997 88899999999998864 388999888 687521 111112 2
Q ss_pred HHHHHHHHHHhcC
Q 005093 703 FLNIGLWFKKYCK 715 (715)
Q Consensus 703 ~~~i~~wl~~~l~ 715 (715)
.+.+++||++|||
T Consensus 343 ~~~~~~wfd~~Lk 355 (615)
T 1mpx_A 343 HDVLRPFFDQYLV 355 (615)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhc
Confidence 5778999999986
No 50
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.86 E-value=1.7e-20 Score=187.65 Aligned_cols=233 Identities=12% Similarity=0.171 Sum_probs=156.3
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cccch-HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~-~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
.+...+|..+.+.++.|. ..++.|+||++||+++... ...+. .....|++. |.|+++|+||.+...
T Consensus 7 ~~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~-------- 74 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS-------- 74 (275)
T ss_dssp EEECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC--------
T ss_pred EEecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc--------
Confidence 345568899999999987 4557899999999774322 22333 566777776 999999999854321
Q ss_pred CCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC--------
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-------- 605 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~-------- 605 (715)
.....+|+.++++++.+. .+.++++|+|||+||.+++.++.+ ++++++|+++|..+.........
T Consensus 75 ---~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (275)
T 3h04_A 75 ---LDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIA 147 (275)
T ss_dssp ---HHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHH
T ss_pred ---cchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhccc
Confidence 123478999999999988 567899999999999999999998 78999999999876421110000
Q ss_pred --CCCceeeeccCCCCCCCCCCCCChhhHHH-------------HHh-------c-CchhhccCCCCcEEEEeeCCCCcC
Q 005093 606 --IPDWCYVESYGSKGKDSFTESPSVEDLTR-------------FHS-------K-SPISHISKVKTPTIFLLGAQDLRV 662 (715)
Q Consensus 606 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-------~-sp~~~~~~i~~P~Lii~G~~D~~v 662 (715)
.... ....+.. ............... +.. . .....+.++. |+|+++|++|..+
T Consensus 148 ~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~ 223 (275)
T 3h04_A 148 QSINET-MIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDV 223 (275)
T ss_dssp TTSCHH-HHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSS
T ss_pred ccchHH-HHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCC
Confidence 0000 0000000 000000000000000 000 0 0111235666 9999999999999
Q ss_pred CchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch--HHHHHHHHHHHHHhcC
Q 005093 663 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD--FESFLNIGLWFKKYCK 715 (715)
Q Consensus 663 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~wl~~~l~ 715 (715)
|++.+..+++.+. ..+++++++++|.+...... .++++.+.+||++++.
T Consensus 224 ~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 224 PVEESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp CTHHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9988877766553 47899999999998776664 6899999999998863
No 51
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.86 E-value=4.9e-21 Score=192.85 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=157.0
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCC-----------CCc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSL-----------GFG 525 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~-----------~~g 525 (715)
..|.++...+|.|++++..+++|+||++||+++.. ..|.. ..+.+++.|+.|+++|.++.+ ++|
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g 101 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTD--ENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQG 101 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTT
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCCh--hhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccC
Confidence 36788999999999876678899999999976653 23332 355677889999999976422 111
Q ss_pred hhhhhcCCCC-C-Cccc-hhhHH-HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc
Q 005093 526 EEALQSLPGK-V-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 601 (715)
Q Consensus 526 ~~~~~~~~~~-~-~~~~-~~d~~-~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 601 (715)
..+....+.. + .... ...+. +++.++.+...+ .++++|+|||+||++++.++.++|++|+++++++|.++.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 180 (280)
T 3ls2_A 102 AGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP 180 (280)
T ss_dssp CCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc
Confidence 2211111100 0 0011 12222 334555555433 4899999999999999999999999999999999987643210
Q ss_pred cCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCC----CCcEEEEeeCCCCcCCchH-HHHHHHHHHH
Q 005093 602 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV----KTPTIFLLGAQDLRVPVSN-GLQYARALRE 676 (715)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i----~~P~Lii~G~~D~~v~~~~-~~~~~~~l~~ 676 (715)
... ......++. ....+...+|...+.++ .+|+|++||+.|.+++... +.+++++|++
T Consensus 181 ~~~----~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 243 (280)
T 3ls2_A 181 WGV----KAFTGYLGA-------------DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQ 243 (280)
T ss_dssp HHH----HHHHHHHCS-------------CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHH
T ss_pred chh----hHHHhhcCc-------------hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHH
Confidence 000 000000110 11223345565555555 4599999999999998754 8899999999
Q ss_pred cCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 677 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 677 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.|.+++++++++++|.+.. ....+.++++|+.++|+
T Consensus 244 ~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 244 KDYPLTLEMQTGYDHSYFF---ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred hCCCceEEEeCCCCCchhh---HHHHHHHHHHHHHHHhc
Confidence 9999999999999998742 23567889999999875
No 52
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.86 E-value=7e-21 Score=196.00 Aligned_cols=242 Identities=19% Similarity=0.192 Sum_probs=160.8
Q ss_pred cccCCCCc-eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcC
Q 005093 456 NLTKGAQK-PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 456 ~~~~~~g~-~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
++...+|. ++.+++|.|++ ..++.|+||++|||++... ...+...+..|++ .||.|+++||||.+++.
T Consensus 55 ~i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~------- 125 (323)
T 1lzl_A 55 SAPGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT------- 125 (323)
T ss_dssp EECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC-------
T ss_pred EecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC-------
Confidence 44555676 79999999974 3467899999999885532 3456677788877 59999999999955431
Q ss_pred CCCCCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhhc----
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMV---- 601 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~~---- 601 (715)
.....+|+.++++|+.+. ..+|+++|+|+|||+||.+++.++.++++ .++++++++|+.+.....
T Consensus 126 ----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~ 201 (323)
T 1lzl_A 126 ----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMT 201 (323)
T ss_dssp ----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHH
T ss_pred ----CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhHH
Confidence 123478999999999874 23677899999999999999999887665 499999999987643210
Q ss_pred cCCCCCCceeeeccCCCCCCCCCCCCCh--hhHHHHHhcCchhhccCCC--CcEEEEeeCCCCcCCchHHHHHHHHHHHc
Q 005093 602 GTTDIPDWCYVESYGSKGKDSFTESPSV--EDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALREK 677 (715)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~v~~~~~~~~~~~l~~~ 677 (715)
.......+.. ... ......+...... .........+|... ..+. +|+||++|+.|.++ .++..++++++++
T Consensus 202 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~ 276 (323)
T 1lzl_A 202 NFVDTPLWHR-PNA-ILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIEYALRLLQA 276 (323)
T ss_dssp HCSSCSSCCH-HHH-HHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHT
T ss_pred HhccCCCCCH-HHH-HHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHHHHHHHHHc
Confidence 0000000000 000 0000000000000 00000011223221 1222 79999999999987 6788999999999
Q ss_pred CCcEEEEEeCCCCccCCCCC---chHHHHHHHHHHHHHhcC
Q 005093 678 GVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 678 g~~~~~~~~~~~~H~~~~~~---~~~~~~~~i~~wl~~~l~ 715 (715)
|.+++++++++++|++.... ...++++.+.+||+++++
T Consensus 277 g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 277 GVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp TCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999865322 245788999999998864
No 53
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.86 E-value=7e-22 Score=202.49 Aligned_cols=227 Identities=18% Similarity=0.238 Sum_probs=161.8
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
++...+|.++.+++|.|.+ ++.|+||++|||++... ...+...+..|+ +.||.|+++|||+++++.
T Consensus 64 ~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-------- 131 (317)
T 3qh4_A 64 VVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP-------- 131 (317)
T ss_dssp EEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC--------
T ss_pred EecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC--------
Confidence 4556678899999999973 67899999999876543 335666777776 569999999999866532
Q ss_pred CCCCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhhccCCCC
Q 005093 534 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDI 606 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~~~~~~~ 606 (715)
....++|+.++++|+.++ ..+|+++|+|+|+|+||.+++.++.++++ .++++++++|+.+.......
T Consensus 132 ---~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~--- 205 (317)
T 3qh4_A 132 ---YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASR--- 205 (317)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHH---
T ss_pred ---CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCH---
Confidence 233478999999999885 34788999999999999999999887554 58999999998875310000
Q ss_pred CCceeeeccCCCCCCCCCCCCChhhH----HHHH-------hcCchhhccCCC--CcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 607 PDWCYVESYGSKGKDSFTESPSVEDL----TRFH-------SKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~sp~~~~~~i~--~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
..+.. ... ...... ..+. ..+|... ..+. +|+||++|+.|.++ .++..++++
T Consensus 206 ------~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~~--~~~~~~a~~ 270 (317)
T 3qh4_A 206 ------SEFRA---TPA---FDGEAASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPFR--DEVLDYAQR 270 (317)
T ss_dssp ------HHTTT---CSS---SCHHHHHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTTH--HHHHHHHHH
T ss_pred ------HHhcC---CCC---cCHHHHHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCCc--hhHHHHHHH
Confidence 00000 000 000100 1111 1122211 1122 59999999999987 478899999
Q ss_pred HHHcCCcEEEEEeCCCCccCCC----CCchHHHHHHHHHHHHHhcC
Q 005093 674 LREKGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 715 (715)
++++|.+++++++++++|+|.. .+...++++.+.+||+++|+
T Consensus 271 l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 271 LLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999998652 23446788999999999874
No 54
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.86 E-value=1.1e-21 Score=196.95 Aligned_cols=208 Identities=10% Similarity=0.122 Sum_probs=148.2
Q ss_pred CCCCCcEEEEEcCCCCCC---CCccchHHHHHH----HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHH
Q 005093 477 DCSCDPLIVVLHGGPHSV---SLSSYSKSLAFL----SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID 549 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~---~~~~~~~~~~~l----a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~ 549 (715)
..++.|+||++|||++.. ....|...+..| ++.||.|+++|||+++.. .....++|+.++++
T Consensus 37 ~~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~-----------~~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 37 SQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI-----------TNPRNLYDAVSNIT 105 (273)
T ss_dssp CTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS-----------CTTHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC-----------CCCcHHHHHHHHHH
Confidence 356789999999987653 344677788888 689999999999985432 11234789999999
Q ss_pred HHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-----------------CCceeEEEecCCcchhhhhccCCCCCCce-e
Q 005093 550 HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----------------PDKFVAAAARNPLCNLALMVGTTDIPDWC-Y 611 (715)
Q Consensus 550 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~ 611 (715)
++.++ ++.++++|+|||+||.+++.++.++ |++++++|+++|+.++........ .+. +
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~--~~~~~ 181 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYP--EYDCF 181 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCG--GGHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcc--cHHHH
Confidence 99887 5678999999999999999999885 788999999999876543321110 000 0
Q ss_pred e-eccCCCCCCCCCCCCChhhHHHHHhcCch--hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 612 V-ESYGSKGKDSFTESPSVEDLTRFHSKSPI--SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 612 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
. ..++. ....+. .... ..++. .....+.+|+|+++|++|.++|++++..+++.+++.+.+++++++++
T Consensus 182 ~~~~~~~-~~~~~~--~~~~------~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~ 252 (273)
T 1vkh_A 182 TRLAFPD-GIQMYE--EEPS------RVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDL 252 (273)
T ss_dssp HHHHCTT-CGGGCC--CCHH------HHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHhcc-cccchh--hccc------ccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCC
Confidence 0 00000 000000 0000 11111 01223679999999999999999999999999999999999999999
Q ss_pred CCccCCCCCchHHHHHHHHHHH
Q 005093 689 DVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl 710 (715)
++|.+.... .++.+.|.+||
T Consensus 253 ~gH~~~~~~--~~~~~~i~~fl 272 (273)
T 1vkh_A 253 GLHNDVYKN--GKVAKYIFDNI 272 (273)
T ss_dssp CSGGGGGGC--HHHHHHHHHTC
T ss_pred CcccccccC--hHHHHHHHHHc
Confidence 999876544 56777787775
No 55
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.86 E-value=1.1e-20 Score=194.23 Aligned_cols=222 Identities=18% Similarity=0.207 Sum_probs=154.0
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~-~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
+|.++ +.|++ .....|+||++|||++.... ..+...+..|++ .||.|+++|||+.+++. ..
T Consensus 66 ~g~~~----~~p~~--~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----------~~ 128 (322)
T 3k6k_A 66 GGVPC----IRQAT--DGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP-----------FP 128 (322)
T ss_dssp TTEEE----EEEEC--TTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC-----------TT
T ss_pred CCEeE----EecCC--CCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC-----------Cc
Confidence 55555 45653 22334459999998865433 356667777775 49999999999865431 22
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCc----eeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
..++|+.++++|+.++ .+|+++|+|+|+|+||.+++.++.++++. ++++|+++|+.++...... +...
T Consensus 129 ~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-------~~~~ 200 (322)
T 3k6k_A 129 AAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWS-------NSNL 200 (322)
T ss_dssp HHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHH-------HHHT
T ss_pred hHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccc-------hhhc
Confidence 3588999999999998 46889999999999999999999887665 8999999998875321100 0000
Q ss_pred cCCCCCCCCCCCCChhhH----HHH--------HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE
Q 005093 615 YGSKGKDSFTESPSVEDL----TRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~----~~~--------~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
... ... ...... ..+ ...+|+.......+|+||++|+.|.++ .++..++++++++|++++
T Consensus 201 ~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~ 272 (322)
T 3k6k_A 201 ADR----DFL--AEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVE 272 (322)
T ss_dssp GGG----CSS--SCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEE
T ss_pred cCC----CCc--CCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEE
Confidence 000 000 000000 001 122444333334479999999999874 788999999999999999
Q ss_pred EEEeCCCCccCCCC----CchHHHHHHHHHHHHHhcC
Q 005093 683 VIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 683 ~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~~l~ 715 (715)
++++++++|.+... +...++++.+.+||+++|+
T Consensus 273 l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 273 LKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCccccccccccChHHHHHHHHHHHHHHHHHh
Confidence 99999999987642 2345788999999998874
No 56
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=1.1e-19 Score=193.72 Aligned_cols=244 Identities=17% Similarity=0.148 Sum_probs=182.5
Q ss_pred CCCceEEEEecCCCCC--CeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 005093 52 PSGSKLLVVRNPENES--PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 128 (715)
Q Consensus 52 pdg~~la~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 128 (715)
+.+.+|+|+....++. ..++..+ .++..+.++.....+ ..++|||||++|+|.+...
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v----------~~~~~Spdg~~la~~s~~~---------- 200 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPL----------MSPAWSPDGSKLAYVTFES---------- 200 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCE----------EEEEECTTSSEEEEEECTT----------
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcc----------eeeEEcCCCCEEEEEEecC----------
Confidence 4588999998764221 4566655 555666665543333 7899999999999986532
Q ss_pred CCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeec
Q 005093 129 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 208 (715)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~ 208 (715)
+...|++||+++++.+.+ ......+..++|||||+. |+|+...
T Consensus 201 -------------------------------~~~~i~~~d~~tg~~~~l--~~~~~~~~~~~~spdg~~----la~~~~~ 243 (415)
T 2hqs_A 201 -------------------------------GRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDGSK----LAFALSK 243 (415)
T ss_dssp -------------------------------SSCEEEEEETTTCCEEEE--ECCSSCEEEEEECTTSSE----EEEEECT
T ss_pred -------------------------------CCcEEEEEECCCCcEEEe--ecCCCcccCEEEcCCCCE----EEEEEec
Confidence 236899999999998887 344446778999999999 9988743
Q ss_pred CccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCC
Q 005093 209 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 288 (715)
Q Consensus 209 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~ 288 (715)
+ ...+||++|+ .+++.++++.....+..+.|||||++|+|.+.+.
T Consensus 244 ~------------g~~~i~~~d~-----------------~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~------ 288 (415)
T 2hqs_A 244 T------------GSLNLYVMDL-----------------ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA------ 288 (415)
T ss_dssp T------------SSCEEEEEET-----------------TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTT------
T ss_pred C------------CCceEEEEEC-----------------CCCCEEeCcCCCCcccceEECCCCCEEEEEECCC------
Confidence 2 2347999997 7788888888777888999999999999999653
Q ss_pred ccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 289 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 289 ~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
...+||++|+.+++.+.++.... ....+.|+|||+.|++.+...+...|+.+|+.+++
T Consensus 289 --g~~~i~~~d~~~~~~~~l~~~~~--------------------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 289 --GRPQVYKVNINGGAPQRITWEGS--------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp --SSCEEEEEETTSSCCEECCCSSS--------------------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred --CCcEEEEEECCCCCEEEEecCCC--------------------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 23579999998876554442211 12346799999999888877777899999999999
Q ss_pred EEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 369 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 369 ~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
.+.+.... ......|+++|+.|++...... ...|++.++.+
T Consensus 347 ~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~g 387 (415)
T 2hqs_A 347 VQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTDG 387 (415)
T ss_dssp EEECCCSS-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETTS
T ss_pred EEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECCC
Confidence 98887654 4556789999998888775433 45788888753
No 57
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.86 E-value=5.2e-22 Score=202.50 Aligned_cols=200 Identities=18% Similarity=0.194 Sum_probs=148.5
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
.+...+|.|++ ..++.|+||++|||++... ...+...+..|+++||.|+++|||+.++... .....
T Consensus 67 ~~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~-----------~~~~~ 133 (303)
T 4e15_A 67 RQLVDVFYSEK--TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL-----------EQLMT 133 (303)
T ss_dssp TCEEEEEECTT--CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCH-----------HHHHH
T ss_pred CcEEEEEecCC--CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCCh-----------hHHHH
Confidence 34556888863 4567899999999876543 3356667888999999999999999654321 22478
Q ss_pred hHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhCC-------CceeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 543 DVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP-------DKFVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 543 d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
|+.++++++.+. ...+.++|+|+|||+||++++.++.+.+ ++++++|+++|+.++......... + ....
T Consensus 134 d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~--~-~~~~ 210 (303)
T 4e15_A 134 QFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESV--N-PKNI 210 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTT--S-GGGT
T ss_pred HHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccccc--c-hhhh
Confidence 999999999873 1245789999999999999999988654 279999999999887544321100 0 0000
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCch-hhccCC----CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCC
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPI-SHISKV----KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 689 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~i----~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~ 689 (715)
+ .. ..+.+...+|+ ..+..+ .+|+|++||++|..++..++.+++++++++|.++++++++++
T Consensus 211 ~---------~~----~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~ 277 (303)
T 4e15_A 211 L---------GL----NERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGY 277 (303)
T ss_dssp T---------CC----CTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred h---------cC----CHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 0 00 11223455666 455554 899999999999999999999999999999999999999999
Q ss_pred Ccc
Q 005093 690 VHG 692 (715)
Q Consensus 690 ~H~ 692 (715)
+|.
T Consensus 278 ~H~ 280 (303)
T 4e15_A 278 DHF 280 (303)
T ss_dssp ETT
T ss_pred Cch
Confidence 994
No 58
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.86 E-value=1.2e-21 Score=200.95 Aligned_cols=232 Identities=20% Similarity=0.204 Sum_probs=160.0
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~-~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
++...+| .+.+++|.|++ .++.|+||++|||++.. ....+...+..|++ .||.|+++||||.+++.
T Consensus 55 ~i~~~~g-~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~-------- 122 (313)
T 2wir_A 55 TIPGRGG-PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHK-------- 122 (313)
T ss_dssp EEEETTE-EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSC--------
T ss_pred EeeCCCC-cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCC--------
Confidence 3344455 89999999973 45679999999987433 34467778888887 49999999999965431
Q ss_pred CCCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCCc----eeEEEecCCcchhhhhccCCCC
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDI 606 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~~~~~~~~~~~~ 606 (715)
.....+|+.++++|+.+.. .+|+++|+|+|+|+||.+++.++.+++++ ++++|+++|+.+......
T Consensus 123 ---~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~---- 195 (313)
T 2wir_A 123 ---FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLTGSPT---- 195 (313)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCCSSCCC----
T ss_pred ---CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCCCCCCC----
Confidence 1234788999999988752 36777999999999999999999887776 999999999876211100
Q ss_pred CCceeeeccCCCCCCCCCCCCChhhHHH-------------HHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 607 PDWCYVESYGSKGKDSFTESPSVEDLTR-------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
..+ ..+... ...+ ........ ....+|+...-+..+|+|+++|+.|.++ .++..++++
T Consensus 196 ~~~---~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~ 266 (313)
T 2wir_A 196 VSR---VEYSGP-EYVI---LTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR--DEGELYAHL 266 (313)
T ss_dssp HHH---HHTCSG-GGCS---SCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHH
T ss_pred cCH---HHhccc-CCCc---cCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh--HHHHHHHHH
Confidence 000 000000 0000 00000000 0112443211122269999999999988 577889999
Q ss_pred HHHcCCcEEEEEeCCCCccCCCC----CchHHHHHHHHHHHHHhcC
Q 005093 674 LREKGVETKVIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~~l~ 715 (715)
+++.|.+++++++++++|.+... +...++++.+.+||+++++
T Consensus 267 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 267 LKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987632 2345788899999998764
No 59
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.86 E-value=5.2e-21 Score=198.33 Aligned_cols=233 Identities=16% Similarity=0.165 Sum_probs=155.4
Q ss_pred CceEEEEEEecCCC-CCCCCCcEEEEEcCCCCCCCCc---cchHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 462 QKPFEAIFVSSSHK-KDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 462 g~~l~~~l~~P~~~-~~~~~~P~vv~iHGg~~~~~~~---~~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
+..+.+.+|.|++. ...++.|+||++|||++..... .|...+..|+ ++||.|+++||||.+++.
T Consensus 63 ~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~----------- 131 (338)
T 2o7r_A 63 LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR----------- 131 (338)
T ss_dssp TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------
T ss_pred CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------
Confidence 34567778888753 3357889999999988654332 2667788887 789999999999965431
Q ss_pred CccchhhHHHHHHHHHHcC------CCCCceEEEEEeChhHHHHHHHHhhCCC--------ceeEEEecCCcchhhhhcc
Q 005093 537 GSQDVNDVLTAIDHVIDMG------LANPSKVTVVGGSHGGFLTTHLIGQAPD--------KFVAAAARNPLCNLALMVG 602 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~------~~d~~~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~~~~~~~~~~~ 602 (715)
....++|+.++++|+.++. .+|.++++|+|||+||.+++.++.++|+ +++++|+++|+.+......
T Consensus 132 ~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~ 211 (338)
T 2o7r_A 132 LPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTG 211 (338)
T ss_dssp TTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCH
T ss_pred CchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCCh
Confidence 1234789999999998863 2567899999999999999999998887 8999999999865321100
Q ss_pred ----CCCCCCce--e----eeccC-CCCCC-CCCCCCChhhHHHHHhcCc---hhhccCCCCcEEEEeeCCCCcCCchHH
Q 005093 603 ----TTDIPDWC--Y----VESYG-SKGKD-SFTESPSVEDLTRFHSKSP---ISHISKVKTPTIFLLGAQDLRVPVSNG 667 (715)
Q Consensus 603 ----~~~~~~~~--~----~~~~~-~~~~~-~~~~~~~~~~~~~~~~~sp---~~~~~~i~~P~Lii~G~~D~~v~~~~~ 667 (715)
........ . ...+. ..... .....+. ...++ +..+..+.+|+|+++|++|.+++ .+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~ 282 (338)
T 2o7r_A 212 SELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPT-------AESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQ 282 (338)
T ss_dssp HHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC-----------CCTHHHHHHHHTCEEEEEEETTSTTHH--HH
T ss_pred hhhccCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCC-------CCCcccccHhhhcCCCCCEEEEECCCCcchH--HH
Confidence 00000000 0 00000 00000 0000000 00010 12223355699999999999886 56
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCccCCCC--CchHHHHHHHHHHHHHhc
Q 005093 668 LQYARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 668 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~wl~~~l 714 (715)
.++++++++.+.+++++++++++|.+... +...++++.+.+||++++
T Consensus 283 ~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 283 MELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 77889999999999999999999987643 233678899999998765
No 60
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=1.5e-20 Score=195.54 Aligned_cols=298 Identities=13% Similarity=0.113 Sum_probs=186.9
Q ss_pred ccccccccccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCcc
Q 005093 2 FSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQL 79 (715)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~ 79 (715)
|+...++...+++...||++|+.++. ..+| ..+..++|||||++|||+...++ +..++|.+. .+++.
T Consensus 29 ~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l---------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~ 97 (347)
T 2gop_A 29 YVLTKANLKDNKYENTIVIENLKNNA--RRFI---------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS 97 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEETTTCC--EEEE---------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE
T ss_pred EEEeecCcccCCccceEEEEeCCCCc--eEEc---------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce
Confidence 45555666667788999998776543 3433 34688999999999999987542 445688887 67777
Q ss_pred EEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCc
Q 005093 80 EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK 159 (715)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 159 (715)
.+++.... . ..+.|||||++|+|.+....... .........|..+ |.++...
T Consensus 98 ~~l~~~~~-~----------~~~~wspdg~~l~~~~~~~~~~~----------------~~~~~~~~~~~~~-g~~~~~~ 149 (347)
T 2gop_A 98 KKILEAKN-I----------RSLEWNEDSRKLLIVGFKRREDE----------------DFIFEDDVPAWFD-DLGFFDG 149 (347)
T ss_dssp EEEEEESE-E----------EEEEECTTSSEEEEEEECCCC-------------------------CCCC----------
T ss_pred EEEEcCCC-c----------cceeECCCCCEEEEEEccCCCcC----------------CcEEEcccceeec-CcccccC
Confidence 77776543 3 78999999999999875421100 0000111112222 3333333
Q ss_pred cCceEEEEEccCCce-EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 160 RQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~-~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
...+||++|+++++. +.++ . . .+..+.||||| . ++. +....... +.....+||.+|
T Consensus 150 ~~~~l~~~d~~~~~~~~~l~--~-~-~~~~~~~spdg-~----~~~-~~~~~~~~-----~~~~~~~l~~~d-------- 206 (347)
T 2gop_A 150 EKTTFWIFDTESEEVIEEFE--K-P-RFSSGIWHRDK-I----VVN-VPHREIIP-----QYFKFWDIYIWE-------- 206 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEE--E-E-TTCEEEEETTE-E----EEE-EECCCSSC-----CSSCCEEEEEEE--------
T ss_pred ccceEEEEECCCCeEEeeec--C-C-CcccccCCCCe-E----EEE-Eecccccc-----cccccccEEEeC--------
Confidence 357899999999998 7784 3 3 67789999998 5 444 32221000 000134788876
Q ss_pred hhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 239 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
+++.+.++.. .....+ ||||++|+|.+..... ......+||++| +++.+.++.....
T Consensus 207 -----------~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~---~~~~~~~l~~~d--~~~~~~l~~~~~~---- 263 (347)
T 2gop_A 207 -----------DGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKK---YMSEHNKLYIYD--GKEVMGILDEVDR---- 263 (347)
T ss_dssp -----------TTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSS---CCCSSCEEEEEC--SSCEEESSTTCCS----
T ss_pred -----------CCceEEeccC-cceeeE--CCCCCEEEEEEccccC---CccccceEEEEC--CCceEeccccCCc----
Confidence 2455666654 434333 9999999999876421 112346799998 4444444432111
Q ss_pred eecCCCCCccccccCCCCC-CccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeC
Q 005093 319 VQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~-~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
.+.. +.|+ || ++++...++..+|| ++ +|+.+.+....+.+....+++ .++++.++
T Consensus 264 ---------------~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~--~g~~~~~~~~~~~v~~~~~s~---~~~~~~~~ 319 (347)
T 2gop_A 264 ---------------GVGQAKIKD-GK--VYFTLFEEGSVNLY-IW--DGEIKPIAKGRHWIMGFDVDE---IVVYLKET 319 (347)
T ss_dssp ---------------EEEEEEEET-TE--EEEEEEETTEEEEE-EE--SSSEEEEECSSSEEEEEEESS---SEEEEEEC
T ss_pred ---------------ccCCccEEc-Cc--EEEEEecCCcEEEE-Ec--CCceEEEecCCCeEEeeeeeC---cEEEEEcC
Confidence 1222 5688 77 77888888888999 99 577777776544333333444 68888889
Q ss_pred CCCCCeEEEEe
Q 005093 398 PVDVPQVKYGY 408 (715)
Q Consensus 398 ~~~p~~l~~~~ 408 (715)
...|++||.++
T Consensus 320 ~~~~~~l~~~~ 330 (347)
T 2gop_A 320 ATRLRELFTWD 330 (347)
T ss_dssp SSSCCEEEEES
T ss_pred CCChHHheEeC
Confidence 99999999987
No 61
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.86 E-value=1.1e-20 Score=193.97 Aligned_cols=225 Identities=19% Similarity=0.228 Sum_probs=158.7
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~-~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
...+| ++.+++|.|.+ .++.|+||++|||++.. ....|...+..|++ .||.|+++||||.+++.
T Consensus 71 ~~~~~-~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~---------- 136 (323)
T 3ain_A 71 PGSET-NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENK---------- 136 (323)
T ss_dssp ECSSS-EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC----------
T ss_pred cCCCC-eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCC----------
Confidence 33344 89999999973 56789999999987543 34467778888876 49999999999965431
Q ss_pred CCccchhhHHHHHHHHHHcCC-C-CCceEEEEEeChhHHHHHHHHhhCCCce---eEEEecCCcchhhhhccCCCCCCce
Q 005093 536 VGSQDVNDVLTAIDHVIDMGL-A-NPSKVTVVGGSHGGFLTTHLIGQAPDKF---VAAAARNPLCNLALMVGTTDIPDWC 610 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~a~~~p~~~---~~~v~~~~~~~~~~~~~~~~~~~~~ 610 (715)
.....+|+.++++|+.+... . |.++|+|+|+|+||.+++.++.++|++. +++++++|+.+...... .+
T Consensus 137 -~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~~- 209 (323)
T 3ain_A 137 -FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITK-----SL- 209 (323)
T ss_dssp -TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCH-----HH-
T ss_pred -CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCc-----cH-
Confidence 12347899999999988631 1 7889999999999999999998887765 89999999876321100 00
Q ss_pred eeeccCCCCCCCCCCCCChhhHHH----H---------HhcCchhh-ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHH
Q 005093 611 YVESYGSKGKDSFTESPSVEDLTR----F---------HSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE 676 (715)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~sp~~~-~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~ 676 (715)
..+.. .... ....... + ...+|+.. +..+ +|+||++|+.|.++ .++..+++++++
T Consensus 210 --~~~~~---~~~l---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~~ 278 (323)
T 3ain_A 210 --YDNGE---GFFL---TREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLLQ 278 (323)
T ss_dssp --HHHSS---SSSS---CHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHHH
T ss_pred --HHhcc---CCCC---CHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHHH
Confidence 00000 0000 0000000 0 12234332 2222 59999999999987 578889999999
Q ss_pred cCCcEEEEEeCCCCccCCCC----CchHHHHHHHHHHHHHhc
Q 005093 677 KGVETKVIVFPNDVHGIERP----QSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 677 ~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~~l 714 (715)
++.+++++++++++|.+... +...++.+.+.+||+++|
T Consensus 279 ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 279 SGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp TTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997642 334578899999999876
No 62
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.85 E-value=1.9e-20 Score=198.98 Aligned_cols=237 Identities=16% Similarity=0.228 Sum_probs=158.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHH-HHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~-~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
+|..+.++++.+ ..++.|+||++||++.. ...+.... ..+.++||.|+++|+|| +|.+..... .....
T Consensus 143 ~~~~l~~~~~~~----~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~g~~vi~~D~~G---~G~s~~~~~--~~~~~ 211 (405)
T 3fnb_A 143 EGELLPGYAIIS----EDKAQDTLIVVGGGDTS--REDLFYMLGYSGWEHDYNVLMVDLPG---QGKNPNQGL--HFEVD 211 (405)
T ss_dssp TTEEEEEEEECC----SSSCCCEEEEECCSSCC--HHHHHHHTHHHHHHTTCEEEEECCTT---STTGGGGTC--CCCSC
T ss_pred CCeEEEEEEEcC----CCCCCCEEEEECCCCCC--HHHHHHHHHHHHHhCCcEEEEEcCCC---CcCCCCCCC--CCCcc
Confidence 467899988843 34556999999996443 33443333 35668999999999999 444432211 22223
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-----CCCCCceeeec
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDWCYVES 614 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~ 614 (715)
...|+.++++++.... ++|+|+|||+||++++.++.++| +++++|+.+|+.++...... ...+.+.. ..
T Consensus 212 ~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~-~~ 285 (405)
T 3fnb_A 212 ARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTIL-KW 285 (405)
T ss_dssp THHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHH-HH
Confidence 4778888888886653 78999999999999999999988 89999999999876543210 00111000 00
Q ss_pred cCCCCCCC---------------CCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCC
Q 005093 615 YGSKGKDS---------------FTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 679 (715)
Q Consensus 615 ~~~~~~~~---------------~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~ 679 (715)
+.. .... +...........+....+...+.++++|+|+++|++|..+|+.++..+++.++..+.
T Consensus 286 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~ 364 (405)
T 3fnb_A 286 GSK-LVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGI 364 (405)
T ss_dssp -------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHH-HhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCC
Confidence 000 0000 000000011122223333334778899999999999999999999999999999899
Q ss_pred cEEEEEeCCCCcc--CCCCCchHHHHHHHHHHHHHhcC
Q 005093 680 ETKVIVFPNDVHG--IERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 680 ~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+++++++++..|. ....+....+.+.|.+||+++|+
T Consensus 365 ~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 365 DVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp CEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 9999999666554 22355666788999999999874
No 63
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.85 E-value=8e-21 Score=212.00 Aligned_cols=254 Identities=14% Similarity=0.182 Sum_probs=172.6
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-----CC-CccchHH---H-HHHHhCCcEEEEEcCCCCCCCc
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-----VS-LSSYSKS---L-AFLSSVGYSLLIVNYRGSLGFG 525 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~-----~~-~~~~~~~---~-~~la~~G~~vi~~d~rG~~~~g 525 (715)
.+...||.+|.++++.|++ .+++|+||++||.+.. .. ...|... . +.|+++||+|+.+|+||+++++
T Consensus 41 ~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 4456689999999999974 3678999999973321 00 0111111 2 7899999999999999988877
Q ss_pred hhhhhcCC--CCCC---ccchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh
Q 005093 526 EEALQSLP--GKVG---SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 599 (715)
Q Consensus 526 ~~~~~~~~--~~~~---~~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 599 (715)
..+....+ ..++ ..+.+|+.++++||.++ +..+ .||+++|+||||++++.+++++++.++++|+.+++.++..
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~~~ 196 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWM 196 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCTTT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccccc
Confidence 66532211 1122 35789999999999998 7666 6999999999999999999888999999999999888532
Q ss_pred --hc---cCCCCC--CceeeeccCCC---C-----CCCC---C---------------CCCChh-------hHHHHHhcC
Q 005093 600 --MV---GTTDIP--DWCYVESYGSK---G-----KDSF---T---------------ESPSVE-------DLTRFHSKS 639 (715)
Q Consensus 600 --~~---~~~~~~--~~~~~~~~~~~---~-----~~~~---~---------------~~~~~~-------~~~~~~~~s 639 (715)
.. +..... .|......... . ...+ . ..+.+. ..+.|...+
T Consensus 197 ~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~yw~~~S 276 (652)
T 2b9v_A 197 GDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAFWQGQA 276 (652)
T ss_dssp BSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSSHHHHTTC
T ss_pred ccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCCChHHhcCC
Confidence 10 000000 00000000000 0 0000 0 000000 012345678
Q ss_pred chhhccC--CCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC--CcEEEEEeCCCCccCCC-----C-------C-chHHH
Q 005093 640 PISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKG--VETKVIVFPNDVHGIER-----P-------Q-SDFES 702 (715)
Q Consensus 640 p~~~~~~--i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~-----~-------~-~~~~~ 702 (715)
|..++++ |++|+|++||..|.. ++.++.+++++|++++ ++.++++.|. +|+... . . .....
T Consensus 277 p~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 354 (652)
T 2b9v_A 277 LDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGDTAHQYR 354 (652)
T ss_dssp HHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCccccccccchhhh
Confidence 8888999 999999999999997 6688999999999998 8889999887 687521 0 1 11223
Q ss_pred HHHHHHHHHHhcC
Q 005093 703 FLNIGLWFKKYCK 715 (715)
Q Consensus 703 ~~~i~~wl~~~l~ 715 (715)
.+.+++||++|||
T Consensus 355 ~~~~~~wfd~~Lk 367 (652)
T 2b9v_A 355 RDVFRPFFDEYLK 367 (652)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhC
Confidence 6788999999986
No 64
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.85 E-value=1.8e-21 Score=195.91 Aligned_cols=234 Identities=10% Similarity=0.030 Sum_probs=157.5
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCCCchhh-------
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEA------- 528 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~~g~~~------- 528 (715)
...|.++...+|.|+++. .+++|+||++||++... ..|.. ....+++.||.|+++|+||.+......
T Consensus 23 ~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g 99 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTH--ANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMG 99 (278)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSB
T ss_pred cccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEecCCcccCccccccccccccc
Confidence 346788999999998653 67899999999976553 33433 344566779999999999743221100
Q ss_pred -----hhcCCC-CC-Cccchh-hHH-HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh
Q 005093 529 -----LQSLPG-KV-GSQDVN-DVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 599 (715)
Q Consensus 529 -----~~~~~~-~~-~~~~~~-d~~-~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 599 (715)
...... .+ ...... .+. ++++++.+...+|+++++|+|||+||++++.++.++|++++++++++|+++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 179 (278)
T 3e4d_A 100 KGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSS 179 (278)
T ss_dssp TTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGG
T ss_pred CCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccC
Confidence 000000 00 011112 222 466677766557789999999999999999999999999999999999876432
Q ss_pred hccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC--CcEEEEeeCCCCcCCchH-HHHHHHHHHH
Q 005093 600 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSN-GLQYARALRE 676 (715)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~v~~~~-~~~~~~~l~~ 676 (715)
.... ...+...++. ....+...+|...+.+++ +|+|++||+.|.+++... +..+.+++++
T Consensus 180 ~~~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 242 (278)
T 3e4d_A 180 ADWS----EPALEKYLGA-------------DRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKG 242 (278)
T ss_dssp CTTT----HHHHHHHHCS-------------CGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTT
T ss_pred Cccc----hhhHHHhcCC-------------cHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHH
Confidence 1100 0000000110 012233455555555443 599999999999997422 6889999999
Q ss_pred cCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 677 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 677 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.|.+++++++++++|.+.. ....+.++++|+.++|+
T Consensus 243 ~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 243 TDIGLTLRMHDRYDHSYYF---ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp SSCEEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred cCCCceEEEeCCCCcCHHH---HHHHHHHHHHHHHHhcC
Confidence 9999999999999998643 23567889999999875
No 65
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.85 E-value=1.6e-20 Score=192.26 Aligned_cols=235 Identities=17% Similarity=0.194 Sum_probs=157.5
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHhC-CcEEEEEcCCCCCCCchhhhhcCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPG 534 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~-~~~~~~~~~~~la~~-G~~vi~~d~rG~~~~g~~~~~~~~~ 534 (715)
+...+| .+.+++|.|.+ ..+.|+||++|||++.. ....|...+..|+++ ||.|+++||||.+++.
T Consensus 53 i~~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~--------- 119 (311)
T 2c7b_A 53 IPVSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK--------- 119 (311)
T ss_dssp EEETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC---------
T ss_pred ecCCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC---------
Confidence 344455 89999999973 34579999999987433 244677788888875 9999999999965431
Q ss_pred CCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCC----ceeEEEecCCcchhhhh-------
Q 005093 535 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALM------- 600 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~~~~~~~~~------- 600 (715)
.....+|+.++++++.+.. .+|+++|+|+|||+||.+++.++.++|+ +++++|+++|+.++...
T Consensus 120 --~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~ 197 (311)
T 2c7b_A 120 --FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVE 197 (311)
T ss_dssp --TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHH
T ss_pred --CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCcc
Confidence 1224788999999988752 3677899999999999999999987765 59999999998763100
Q ss_pred -ccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhh-ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC
Q 005093 601 -VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 678 (715)
Q Consensus 601 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g 678 (715)
....... + ...........+..... . ......+|+.. +..+ +|+|+++|+.|.+++ .+..++++++..+
T Consensus 198 ~~~~~~~~-~--~~~~~~~~~~~~~~~~~--~-~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~~~~~l~~~g 268 (311)
T 2c7b_A 198 FGVAETTS-L--PIELMVWFGRQYLKRPE--E-AYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGELYAYKMKASG 268 (311)
T ss_dssp HHHCTTCS-S--CHHHHHHHHHHHCSSTT--G-GGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTT
T ss_pred HHHhccCC-C--CHHHHHHHHHHhCCCCc--c-ccCcccCcccccccCC-CcceEEEcCCCCchH--HHHHHHHHHHHCC
Confidence 0000000 0 00000000000000000 0 00011233322 2333 499999999999884 5677888999999
Q ss_pred CcEEEEEeCCCCccCCC----CCchHHHHHHHHHHHHHhcC
Q 005093 679 VETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+++++++++++|.+.. .+...++.+.+.+||+++++
T Consensus 269 ~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 269 SRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998763 23345788999999998864
No 66
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.85 E-value=1.5e-20 Score=187.68 Aligned_cols=239 Identities=15% Similarity=0.174 Sum_probs=153.0
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|..+....+.+. ..+.|+||++||++.......+......++++||.|+++|+||.+ .+.. ...
T Consensus 18 ~~~~g~~l~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G---~s~~-----~~~ 85 (270)
T 3llc_A 18 QGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHG---ASGG-----AFR 85 (270)
T ss_dssp SGGGCEEEEEEEECCS----STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTST---TCCS-----CGG
T ss_pred eccCcceEEEEeccCC----CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCC---CCCC-----ccc
Confidence 3457888877666553 234799999999766543333444677788999999999999944 3321 111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh---CC---CceeEEEecCCcchhhhhccCCCCCCce-
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ---AP---DKFVAAAARNPLCNLALMVGTTDIPDWC- 610 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~---~p---~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 610 (715)
...++++.+.+..+++. +..++++|+|||+||.+++.++.+ +| ++++++|+++|..++.............
T Consensus 86 ~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 163 (270)
T 3llc_A 86 DGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRER 163 (270)
T ss_dssp GCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHH
T ss_pred cccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhh
Confidence 22344444444433333 135799999999999999999999 99 8999999999987654321100000000
Q ss_pred --eeeccCCCCCCCCCCCC---ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEE
Q 005093 611 --YVESYGSKGKDSFTESP---SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 685 (715)
Q Consensus 611 --~~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~ 685 (715)
+...........+...+ ................+.++++|+|+++|++|..+|.+.+..+++.+.. .++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~ 241 (270)
T 3llc_A 164 AELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA--DDVVLTL 241 (270)
T ss_dssp HHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS--SSEEEEE
T ss_pred hhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC--CCeeEEE
Confidence 00000000000010001 1122333444445566788899999999999999999888887776633 3589999
Q ss_pred eCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 686 FPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 686 ~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+++++|.+...+....+.+.+.+||++
T Consensus 242 ~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 242 VRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp ETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred eCCCcccccccccHHHHHHHHHHHhcC
Confidence 999999876666666777888888865
No 67
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.85 E-value=5.5e-21 Score=199.67 Aligned_cols=236 Identities=17% Similarity=0.162 Sum_probs=160.2
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
++...+|..+.+.+|.|.+. .++.|+||++|||++... .. .|......|+++||.|+++||||.+++.
T Consensus 86 ~~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~------- 156 (361)
T 1jkm_A 86 TILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE------- 156 (361)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT-------
T ss_pred eeecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCC-------
Confidence 34455677899999999742 237899999999875433 33 4666788898899999999999964321
Q ss_pred CCCCCccchhhHHHHHHHHHHcC-CCCCceEEEEEeChhHHHHHHHHhh-----CCCceeEEEecCCcchhhhhcc----
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQ-----APDKFVAAAARNPLCNLALMVG---- 602 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~-~~d~~~i~l~G~S~GG~~a~~~a~~-----~p~~~~~~v~~~~~~~~~~~~~---- 602 (715)
+.........|+.++++|+.++. ....++|+|+|||+||.+++.++.. +|++++++|+++|+.+......
T Consensus 157 ~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~ 236 (361)
T 1jkm_A 157 GHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERR 236 (361)
T ss_dssp EECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHH
T ss_pred CCCCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccc
Confidence 11122345789999999998762 0122399999999999999999987 7879999999999876510000
Q ss_pred CCCCCCceeeeccCCCCCCCCCCCCChhhHHH----H---------HhcCch----hhccCCCCcEEEEeeCCCCcCCch
Q 005093 603 TTDIPDWCYVESYGSKGKDSFTESPSVEDLTR----F---------HSKSPI----SHISKVKTPTIFLLGAQDLRVPVS 665 (715)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~sp~----~~~~~i~~P~Lii~G~~D~~v~~~ 665 (715)
......+. .... .. ........ + ...+|. ..+.++. |+||++|++|.+++
T Consensus 237 ~~~~~~~~---~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~-- 303 (361)
T 1jkm_A 237 LTELPSLV---ENDG----YF---IENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD-- 303 (361)
T ss_dssp HHHCTHHH---HTTT----SS---SCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--
T ss_pred cccCcchh---hccC----cc---cCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--
Confidence 00000000 0000 00 00000000 0 012333 2345565 99999999999986
Q ss_pred HHHHHHHHHHHcCCcEEEEEeCCCCccCC-CC----Cch-HHHHHHHHHHHHHh
Q 005093 666 NGLQYARALREKGVETKVIVFPNDVHGIE-RP----QSD-FESFLNIGLWFKKY 713 (715)
Q Consensus 666 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~-~~----~~~-~~~~~~i~~wl~~~ 713 (715)
++..+++++++.|.+++++++++++|.+. .. ... .++.+.+.+||+++
T Consensus 304 ~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 304 EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999876 21 222 57788999999876
No 68
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.85 E-value=2e-20 Score=182.53 Aligned_cols=194 Identities=12% Similarity=0.092 Sum_probs=142.9
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCC----------------CchhhhhcC
Q 005093 469 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLG----------------FGEEALQSL 532 (715)
Q Consensus 469 l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~----------------~g~~~~~~~ 532 (715)
++.|+ ..++.|+||++||.+.. ...|...+..|+++||.|+++|.++.+. +..
T Consensus 14 ~~~p~---~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~------ 82 (232)
T 1fj2_A 14 AIVPA---ARKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSP------ 82 (232)
T ss_dssp EEECC---SSCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCST------
T ss_pred cccCC---CCCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCc------
Confidence 45665 45678999999997654 4466777778888899999985443100 100
Q ss_pred CCCCCcc----chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCC
Q 005093 533 PGKVGSQ----DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD 608 (715)
Q Consensus 533 ~~~~~~~----~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 608 (715)
....... ..+++.++++++.+ ..+|.++++++|||+||.+++.++.++|++++++|+++|.........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~------ 155 (232)
T 1fj2_A 83 DSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP------ 155 (232)
T ss_dssp TCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC------
T ss_pred ccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcccc------
Confidence 0001111 24555666666655 447779999999999999999999999999999999999764321100
Q ss_pred ceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCc--EEEEEe
Q 005093 609 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE--TKVIVF 686 (715)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~--~~~~~~ 686 (715)
. ....+.++++|+|+++|++|..++.+.+.++++.+++.+.+ ++++++
T Consensus 156 -------------------~-----------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 205 (232)
T 1fj2_A 156 -------------------Q-----------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTY 205 (232)
T ss_dssp -------------------S-----------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEE
T ss_pred -------------------c-----------cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEe
Confidence 0 01134567799999999999999999999999999988855 999999
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 687 PNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 687 ~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
++++|.+. .+..+.+.+||+++|+
T Consensus 206 ~~~~H~~~-----~~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 206 EGMMHSSC-----QQEMMDVKQFIDKLLP 229 (232)
T ss_dssp TTCCSSCC-----HHHHHHHHHHHHHHSC
T ss_pred CCCCcccC-----HHHHHHHHHHHHHhcC
Confidence 99999873 3556899999999874
No 69
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.85 E-value=3.2e-21 Score=184.09 Aligned_cols=189 Identities=15% Similarity=0.136 Sum_probs=132.8
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHH---c
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID---M 554 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~---~ 554 (715)
.+..++||++||.+.+ ...|..+++.|+..|+.|++|+.+|.+.|+..+..... .....+++..+.++.+++ .
T Consensus 19 ~~a~~~Vv~lHG~G~~--~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGT--AADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TTCSEEEEEECCTTCC--HHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCC--HHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHHH
Confidence 4567899999995433 33455556677789999999998875544333221111 111123344444443332 2
Q ss_pred CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHH
Q 005093 555 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 634 (715)
Q Consensus 555 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (715)
..+|++||+|+|+|+||.+++.++.++|+++++++++++....... ....
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~---------------------------~~~~--- 144 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL---------------------------AIGN--- 144 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC---------------------------CGGG---
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh---------------------------hhhh---
Confidence 3489999999999999999999999999999999998874311000 0000
Q ss_pred HHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 635 FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 635 ~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
.......+|+|++||++|++||++.++++++.|++.|.++++++||+.+|.+. .+.++.+.+||.|
T Consensus 145 -------~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~k 210 (210)
T 4h0c_A 145 -------YKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTILK 210 (210)
T ss_dssp -------CCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTTC
T ss_pred -------hhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHcC
Confidence 00012247999999999999999999999999999999999999999999875 3456778888753
No 70
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.3e-19 Score=208.39 Aligned_cols=295 Identities=12% Similarity=0.097 Sum_probs=187.5
Q ss_pred EEEEEEEeecCCCCcccc-ccCCCccccccceEEeeCCCCceEEEEecCCC-----CCCeEEEEe-cCCccEEEEecCcc
Q 005093 16 KFMLSTVISKENENSVTF-QWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQT 88 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~ 88 (715)
..|+++|+.++.. .++ +...+.........++|||||++|||..+... ....++.++ .+|+.++++..+..
T Consensus 36 ~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~ 113 (740)
T 4a5s_A 36 NNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNN 113 (740)
T ss_dssp TEEEEEETTTCCE--EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTT
T ss_pred CcEEEEECCCCce--EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCc
Confidence 4688877776653 333 22222211111234899999999999876431 113556655 56665544332222
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
...++|||||++|||+. ..+||+++
T Consensus 114 ----------~~~~~~SPdG~~la~~~---------------------------------------------~~~i~~~~ 138 (740)
T 4a5s_A 114 ----------TQWVTWSPVGHKLAYVW---------------------------------------------NNDIYVKI 138 (740)
T ss_dssp ----------EEEEEECSSTTCEEEEE---------------------------------------------TTEEEEES
T ss_pred ----------ceeeEECCCCCEEEEEE---------------------------------------------CCeEEEEE
Confidence 26899999999999973 25699999
Q ss_pred ccCCceEeecCCCCCC------------------ccceEEEecCCCCCccEEEEEeecCccce---------------ee
Q 005093 169 INSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLVFVGWSSETRK---------------LG 215 (715)
Q Consensus 169 ~~~g~~~~l~~~~~~~------------------~~~~~~~spdg~~~~~~i~~~~~~~~~~~---------------~g 215 (715)
+++|+.++++ ..+.. ....+.|||||+. |+|.+.....-+ ..
T Consensus 139 ~~~~~~~~lt-~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~----la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 139 EPNLPSYRIT-WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF----LAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp STTSCCEECC-SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE----EEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred CCCCceEEEc-CCCCccceecCcccccccchhcCCCcceEECCCCCE----EEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 9999998885 22211 1124889999999 999864332100 00
Q ss_pred eeee------ecCCceEEEEecccccchhhhhhhhccCCCC---C---CceecCC------CCccccceeEcCCCCeEEE
Q 005093 216 IKYC------YNRPCALYAVRVSLYKSEASELELKESSSED---L---PVVNLTE------SISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 216 ~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~lt~------~~~~~~~~~~spdg~~l~~ 277 (715)
.... .+....|+++|+ ++ + ....+.. ....+..++|||||+.+++
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~-----------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~ 276 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNT-----------------DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQ 276 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEET-----------------TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEEC-----------------CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEE
Confidence 0000 011226888897 66 5 5556654 4456788999999998888
Q ss_pred EecCCCCCCCCccccceeEeeecCCCC-------CCCcccceeeeeeceecCCCCCccccccC--CCCCCccccCCCEEE
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNG-------NFSSLEKIVDVIPVVQCAEGDCFPGLYSS--SILSNPWLSDGCTML 348 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~-------~~~lt~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~dg~~l~ 348 (715)
..++. .....|+++|+.+++ .+.+.... .+ .|.. ....+.|+|||+.|+
T Consensus 277 ~~~r~-------~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~----------~~-----~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 277 WLRRI-------QNYSVMDICDYDESSGRWNCLVARQHIEMS----------TT-----GWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp EEESS-------TTEEEEEEEEEETTTTEEEECGGGCEEEEC----------SS-----SCSSSSSCCCCEECTTSSEEE
T ss_pred EeCCC-------CCEEEEEEEECCCCccccceeEEEEeeecc----------CC-----ceEccCcCCCceEcCCCCEEE
Confidence 87774 234579999998876 12221110 00 0111 134678999999887
Q ss_pred -EEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeC---CCCCCeEEEEeeccc
Q 005093 349 -LSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS---PVDVPQVKYGYFVDK 412 (715)
Q Consensus 349 -~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~---~~~p~~l~~~~~~~~ 412 (715)
+.+...+..+||.+|+++++.++|+.+...+. ..++.+++.|+|++.. ...-..||++++.++
T Consensus 335 ~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~-~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 335 KIISNEEGYRHICYFQIDKKDCTFITKGTWEVI-GIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp EEEECTTSCEEEEEEETTCSSCEESCCSSSCEE-EEEEECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred EEEEcCCCceEEEEEECCCCceEecccCCEEEE-EEEEEeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 66667788999999999999999998755332 2344678899988865 123356888877543
No 71
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.84 E-value=3.2e-20 Score=177.95 Aligned_cols=191 Identities=11% Similarity=0.098 Sum_probs=138.5
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhh----------cCCCCCCc
Q 005093 469 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ----------SLPGKVGS 538 (715)
Q Consensus 469 l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~----------~~~~~~~~ 538 (715)
++.|. ..++.| ||++||.+.. ...|...++.|+ .++.|+++|.++....+..|.. ........
T Consensus 8 ~~~~~---~~~~~p-vv~lHG~g~~--~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~ 80 (209)
T 3og9_A 8 VFKAG---RKDLAP-LLLLHSTGGD--EHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLD 80 (209)
T ss_dssp EEECC---CTTSCC-EEEECCTTCC--TTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHH
T ss_pred EEeCC---CCCCCC-EEEEeCCCCC--HHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHH
Confidence 45554 345678 9999996654 446777778886 8999999996532211111111 00000001
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
...+++.+.++.+.+...+|.++++|+|||+||.+++.++.++|++++++|+++|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 141 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------
Confidence 1244556666666666557889999999999999999999999999999999988642100
Q ss_pred CCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCc
Q 005093 619 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 698 (715)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 698 (715)
........+|+|++||++|.++|++.+.++++.+++.+.++++++++ ++|.+.
T Consensus 142 ----------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~---- 194 (209)
T 3og9_A 142 ----------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT---- 194 (209)
T ss_dssp ----------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC----
T ss_pred ----------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC----
Confidence 00012456899999999999999999999999999999999999998 699884
Q ss_pred hHHHHHHHHHHHHHh
Q 005093 699 DFESFLNIGLWFKKY 713 (715)
Q Consensus 699 ~~~~~~~i~~wl~~~ 713 (715)
.+....+.+||+++
T Consensus 195 -~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 195 -QEEVLAAKKWLTET 208 (209)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhh
Confidence 45678899999874
No 72
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.84 E-value=2.4e-20 Score=182.42 Aligned_cols=210 Identities=16% Similarity=0.095 Sum_probs=153.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC---------
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK--------- 535 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~--------- 535 (715)
+..+++.|.+ +.|+||++||.+.. ...|...+..|+++||.|+++|+||. |.+........
T Consensus 13 ~~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~~ 82 (238)
T 1ufo_A 13 LSVLARIPEA-----PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPRH---GEREGPPPSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEEEEESS-----CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTTS---TTSSCCCCCTTSTTHHHHHH
T ss_pred EEEEEEecCC-----CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCCC---ccCCCCCCcccccchhhhHH
Confidence 3445777762 67999999997644 34566667788899999999999994 43321100000
Q ss_pred -CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 536 -VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 536 -~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
......+|+.++++++.+.+. ++++++|||+||.+++.++.++|++++++++.++..... .....
T Consensus 83 ~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~-------~~~~~---- 148 (238)
T 1ufo_A 83 RVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK-------LPQGQ---- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCC-------CCTTC----
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccch-------hhhhh----
Confidence 011235688888888877642 789999999999999999999999999988887653211 00000
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCchhhccCC-CCcEEEEeeCCCCcCCchHHHHHHHHHH-HcCC-cEEEEEeCCCCc
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALR-EKGV-ETKVIVFPNDVH 691 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~v~~~~~~~~~~~l~-~~g~-~~~~~~~~~~~H 691 (715)
...+ .....+...++...+.++ ++|+|+++|++|..+|.+.+..+++.+. +.+. +++++++++++|
T Consensus 149 ---------~~~~--~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 217 (238)
T 1ufo_A 149 ---------VVED--PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGH 217 (238)
T ss_dssp ---------CCCC--HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCS
T ss_pred ---------ccCC--cccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCc
Confidence 0111 224555666777777888 8999999999999999999999999998 7777 899999999999
Q ss_pred cCCCCCchHHHHHHHHHHHHHhc
Q 005093 692 GIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
.+. .+..+.+.+||.++|
T Consensus 218 ~~~-----~~~~~~~~~~l~~~l 235 (238)
T 1ufo_A 218 TLT-----PLMARVGLAFLEHWL 235 (238)
T ss_dssp SCC-----HHHHHHHHHHHHHHH
T ss_pred ccH-----HHHHHHHHHHHHHHH
Confidence 875 356778889998876
No 73
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.84 E-value=1.7e-20 Score=185.03 Aligned_cols=220 Identities=16% Similarity=0.112 Sum_probs=148.6
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+..|+||++||.+.. ...|...+..|+++||.|+++|+||.+........ .........+|+.++++++...
T Consensus 20 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~d~~~~i~~l~~~---- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGS--PNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDIL--TKGNPDIWWAESSAAVAHMTAK---- 91 (251)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHH--HHCCHHHHHHHHHHHHHHHHTT----
T ss_pred CCCceEEEeCCCCCC--HHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhc--CcccHHHHHHHHHHHHHHHHHh----
Confidence 456889999996654 45778889999999999999999995433111100 0001111257788888888766
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhh-------
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED------- 631 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 631 (715)
.++++++|||+||.+++.++.++|++++++++.+|............ . .+...+. ......+....
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~--~~~~~~~----~~~~~~~~~~~~~~~~~~ 164 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-L--KYAEYMN----RLAGKSDESTQILAYLPG 164 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-H--HHHHHHH----HHHTCCCCHHHHHHHHHH
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-H--HHHHHHH----hhcccCcchhhHHhhhHH
Confidence 57999999999999999999999999999999998765211000000 0 0000000 00000000000
Q ss_pred -HHHHHh--cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHH
Q 005093 632 -LTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 708 (715)
Q Consensus 632 -~~~~~~--~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 708 (715)
...+.. ..+...+.++++|+|+++|++|..+|++.+..+++.+... .+++++++++++|.+.......++.+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 243 (251)
T 3dkr_A 165 QLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIA 243 (251)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHH
Confidence 000110 1123456788999999999999999999999888887653 567899999999988776667789999999
Q ss_pred HHHHhc
Q 005093 709 WFKKYC 714 (715)
Q Consensus 709 wl~~~l 714 (715)
||++..
T Consensus 244 fl~~~~ 249 (251)
T 3dkr_A 244 FMQQEN 249 (251)
T ss_dssp HHHTTC
T ss_pred HHHhhc
Confidence 998753
No 74
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.84 E-value=1.8e-20 Score=186.71 Aligned_cols=194 Identities=15% Similarity=0.150 Sum_probs=147.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~-~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
++..+...+|.|.+ ++.|+||++|||++. .....|...+..|+++||.|+++|+||++.+. ...
T Consensus 47 ~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~-----------~~~ 111 (262)
T 2pbl_A 47 EGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR-----------ISE 111 (262)
T ss_dssp SSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-----------HHH
T ss_pred CCCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC-----------hHH
Confidence 34445566888863 678999999997643 33456777788899999999999999854321 122
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC------CCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
..+|+.++++++..+.. ++++|+|||+||.+++.++.++ |++++++|+++|+.++........ ..
T Consensus 112 ~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~------~~ 182 (262)
T 2pbl_A 112 ITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSM------NE 182 (262)
T ss_dssp HHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTT------HH
T ss_pred HHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhh------hh
Confidence 37899999999988753 7899999999999999999887 889999999999876543211100 00
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
.+ ......+...+|...+.++++|+|+++|++|..++.+++..+++.+. ++++++++++|.+
T Consensus 183 ~~-------------~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~ 244 (262)
T 2pbl_A 183 KF-------------KMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFN 244 (262)
T ss_dssp HH-------------CCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTT
T ss_pred hh-------------CCCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcch
Confidence 00 01123455677877788899999999999999999999999988885 7899999999976
Q ss_pred CCC
Q 005093 694 ERP 696 (715)
Q Consensus 694 ~~~ 696 (715)
...
T Consensus 245 ~~~ 247 (262)
T 2pbl_A 245 VIE 247 (262)
T ss_dssp TTG
T ss_pred HHh
Confidence 543
No 75
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=3.8e-20 Score=196.22 Aligned_cols=311 Identities=14% Similarity=0.133 Sum_probs=192.4
Q ss_pred CccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCC
Q 005093 29 NSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD 107 (715)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD 107 (715)
...+|+..+..........++|||||++|||+...+ +..++|.+. .+++..+++...... ...+.||||
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~-g~~~l~~~d~~~~~~~~l~~~~~~~---------~~~~~~spd 91 (396)
T 3c5m_A 22 KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFD-GNRNYYLLNLETQQAVQLTEGKGDN---------TFGGFISTD 91 (396)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTTEEEECCCSSCBC---------TTTCEECTT
T ss_pred ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecC-CCceEEEEECCCCcEEEeecCCCCc---------cccceECCC
Confidence 455665443211112267789999999999998764 556788887 666665554322211 134899999
Q ss_pred CCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCC-------------------CcccCCcCcccC------CccCc
Q 005093 108 ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ-------------------GDWEEDWGETYA------GKRQP 162 (715)
Q Consensus 108 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~g~~~~------~~~~~ 162 (715)
|++|+|.+.... ...+................+... ..+.|+ +..+. .....
T Consensus 92 g~~l~~~~~~~~--l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 92 ERAFFYVKNELN--LMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPL-TSWEKFAEFYHTNPTC 168 (396)
T ss_dssp SSEEEEEETTTE--EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC-CSHHHHHHHHHTCCCE
T ss_pred CCEEEEEEcCCc--EEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCC-CcceeeeeeccCCCcc
Confidence 999999875431 111111100000000000001100 123333 22111 02447
Q ss_pred eEEEEEccCCceEeecCCCCCCccceEEEec-CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 163 SLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 163 ~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp-dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
.|+++|+++++.+.+ .........+.||| ||+. |+|.+.... .....+||.+++
T Consensus 169 ~l~~~d~~~g~~~~~--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~~~~~l~~~d~---------- 223 (396)
T 3c5m_A 169 RLIKVDIETGELEVI--HQDTAWLGHPIYRPFDDST----VGFCHEGPH---------DLVDARMWLVNE---------- 223 (396)
T ss_dssp EEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCS---------SSCSCCCEEEET----------
T ss_pred eEEEEECCCCcEEee--ccCCcccccceECCCCCCE----EEEEecCCC---------CCCCceEEEEEC----------
Confidence 899999999998888 34444567889999 8998 999863111 012247999997
Q ss_pred hhhccCCCCCCceecCCCC--ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 242 ELKESSSEDLPVVNLTESI--SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~~--~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
+++..+.++... .....+.|||||++|+|.+.... .....|+++|+.+++.+.++..
T Consensus 224 -------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~l~~~d~~~g~~~~l~~~-------- 282 (396)
T 3c5m_A 224 -------DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG------QTDRVIYKANPETLENEEVMVM-------- 282 (396)
T ss_dssp -------TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETT------TCCEEEEEECTTTCCEEEEEEC--------
T ss_pred -------CCCceeEeeccCCCccccceEECCCCCEEEEEecCCC------CccceEEEEECCCCCeEEeeeC--------
Confidence 677777777632 24677999999999999987641 1123499999987665433210
Q ss_pred ecCCCCCccccccCCCCCCcccc-CCCEEEEEeee-------------CCeeEEEEEECCCCcEEEecCCCCC-------
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIW-------------GSSQVIISVNVSSGELLRITPAESN------- 378 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~-dg~~l~~~~~~-------------~~~~~l~~~d~~tg~~~~l~~~~~~------- 378 (715)
++ .. +.|+| ||+.+++.... .+...||.+|+.+++.++++.....
T Consensus 283 --------~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~ 348 (396)
T 3c5m_A 283 --------PP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGD 348 (396)
T ss_dssp --------CS-----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTB
T ss_pred --------CC-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccccccc
Confidence 00 11 57999 99966654321 2457899999999988888755431
Q ss_pred ----ceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 379 ----FSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 379 ----~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
.....|+++|+.|++..... .+.+||.+++.++.
T Consensus 349 ~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 349 RQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESY 386 (396)
T ss_dssp SSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTC
T ss_pred ccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEcccc
Confidence 23357899999998887654 45679999876553
No 76
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.83 E-value=1.4e-19 Score=173.00 Aligned_cols=193 Identities=17% Similarity=0.220 Sum_probs=147.5
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH--HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~--~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
.+|.++++++|.|.+ +.|+||++||++.. ...|.. .+..|+++||.|+++|+|| +|.++....+ ..
T Consensus 11 ~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~--~~ 78 (207)
T 3bdi_A 11 VNGTRVFQRKMVTDS-----NRRSIALFHGYSFT--SMDWDKADLFNNYSKIGYNVYAPDYPG---FGRSASSEKY--GI 78 (207)
T ss_dssp ETTEEEEEEEECCTT-----CCEEEEEECCTTCC--GGGGGGGTHHHHHHTTTEEEEEECCTT---STTSCCCTTT--CC
T ss_pred eCCcEEEEEEEeccC-----CCCeEEEECCCCCC--ccccchHHHHHHHHhCCCeEEEEcCCc---ccccCcccCC--CC
Confidence 378899999999863 57899999997655 456777 8899999999999999999 4444210001 11
Q ss_pred cc-chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccC
Q 005093 538 SQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 616 (715)
Q Consensus 538 ~~-~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (715)
.. ..+++.+.+..+++.. +.++++++|||+||.+++.++.++|++++++++++|..... +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------------~- 139 (207)
T 3bdi_A 79 DRGDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----------------L- 139 (207)
T ss_dssp TTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----------------G-
T ss_pred CcchHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----------------h-
Confidence 22 5777777777777763 45799999999999999999999999999999998852100 0
Q ss_pred CCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC
Q 005093 617 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 696 (715)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 696 (715)
...+.++++|+|+++|++|..++.+.+..+.+.+ .+++++++++++|.+...
T Consensus 140 ------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~ 191 (207)
T 3bdi_A 140 ------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII----SGSRLEIVEGSGHPVYIE 191 (207)
T ss_dssp ------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHS----TTCEEEEETTCCSCHHHH
T ss_pred ------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhc----CCceEEEeCCCCCCcccc
Confidence 2234567899999999999999988887777666 357899999999986533
Q ss_pred CchHHHHHHHHHHHHH
Q 005093 697 QSDFESFLNIGLWFKK 712 (715)
Q Consensus 697 ~~~~~~~~~i~~wl~~ 712 (715)
. ..++.+.+.+||++
T Consensus 192 ~-~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 192 K-PEEFVRITVDFLRN 206 (207)
T ss_dssp S-HHHHHHHHHHHHHT
T ss_pred C-HHHHHHHHHHHHhh
Confidence 3 45678888888875
No 77
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.83 E-value=5.1e-20 Score=208.49 Aligned_cols=245 Identities=12% Similarity=0.096 Sum_probs=167.2
Q ss_pred cCCCCce--EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC----------------------------------------
Q 005093 458 TKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS---------------------------------------- 495 (715)
Q Consensus 458 ~~~~g~~--l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~---------------------------------------- 495 (715)
...||.+ |.+.+|+|++ .+++|+||..||.+....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 5678999 9999999984 468999999987322100
Q ss_pred ------Cccc-----hHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC---------
Q 005093 496 ------LSSY-----SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG--------- 555 (715)
Q Consensus 496 ------~~~~-----~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~--------- 555 (715)
...| ....+.|+++||+|+++|+||.++++.. .......+.+|+.++|+||..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~-----~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGF-----QTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSC-----CCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCc-----CCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 0111 1345789999999999999996554332 12233346889999999998431
Q ss_pred -----CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC-------CCCCceeeeccCCCCCCCC
Q 005093 556 -----LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------DIPDWCYVESYGSKGKDSF 623 (715)
Q Consensus 556 -----~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 623 (715)
..+..||+++|+||||++++.+|+.+|+.++++|+.+|+.++....... ..+.+.. ..+........
T Consensus 331 ~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~-~~l~~~~~~~~ 409 (763)
T 1lns_A 331 HEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDL-DVLAALTYSRN 409 (763)
T ss_dssp CEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCH-HHHHHHHCGGG
T ss_pred ccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhh-hHHhHHHHhhh
Confidence 1345799999999999999999999999999999999988654332111 0000000 00000000000
Q ss_pred C-------------------------CCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC
Q 005093 624 T-------------------------ESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 678 (715)
Q Consensus 624 ~-------------------------~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g 678 (715)
. ..+. ..+.+...++...+.++++|+|++||..|..+|+.++.+++++++. +
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~ 486 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGD--YNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-G 486 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCC--CCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-T
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCc--hhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-C
Confidence 0 0000 0122345667788999999999999999999999999999999976 6
Q ss_pred CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 679 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+.++++ .+++|.........++.+.+.+||++|||
T Consensus 487 ~~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 487 HAKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp CCEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred CCeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 6666655 56789764332233568899999999986
No 78
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.83 E-value=2.2e-19 Score=179.47 Aligned_cols=219 Identities=17% Similarity=0.225 Sum_probs=149.4
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
+.|+||++||.+.. ...|...+..|+++||.|+++|+||.+...... .. ......++|+.++++++..+ .
T Consensus 39 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---~~-~~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGT--PHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDM---ER-TTFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCC--GGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHH---HT-CCHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCC--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCcccc---cc-CCHHHHHHHHHHHHHHHHhh----C
Confidence 45999999996654 456788899999999999999999944432211 11 11122367788888888765 5
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC----CCCceeeeccCCCCCC------CCCCCCCh
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----IPDWCYVESYGSKGKD------SFTESPSV 629 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~ 629 (715)
++++|+|||+||.+++.++.++|+ ++++|+++|............ ...+ ...+...... .+...+ .
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~ 184 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRY--LDSIGSDLKNPDVKELAYEKTP-T 184 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSE--EECCCCCCSCTTCCCCCCSEEE-H
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHH--HHHhCccccccchHhhcccccC-h
Confidence 799999999999999999999999 999999999775433221110 1111 1111110000 000000 1
Q ss_pred hhHHHHHh--cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHH
Q 005093 630 EDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 707 (715)
Q Consensus 630 ~~~~~~~~--~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 707 (715)
.....+.. .+....+.++++|+|+++|++|..+|+..+..+++.+.. .+++++++++++|.+.......++.+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 185 ASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS--TEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC--CcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 11111110 112245678899999999999999999999888877743 45789999999999877666678999999
Q ss_pred HHHHHhc
Q 005093 708 LWFKKYC 714 (715)
Q Consensus 708 ~wl~~~l 714 (715)
+||+++.
T Consensus 263 ~fl~~~~ 269 (270)
T 3rm3_A 263 EFFAKHA 269 (270)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999875
No 79
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.83 E-value=7.5e-20 Score=176.49 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=140.8
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHh--CCcEEEEEcCCCC-----CCCc-hhhhhc-C---CCCC
Q 005093 469 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGS-----LGFG-EEALQS-L---PGKV 536 (715)
Q Consensus 469 l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~--~G~~vi~~d~rG~-----~~~g-~~~~~~-~---~~~~ 536 (715)
++.|+ ..++.|+||++||.+.. ...|...+..|++ +||.|+++|++|. .+++ ..|.+. . ....
T Consensus 5 ~~~~~---~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~ 79 (218)
T 1auo_A 5 LILQP---AKPADACVIWLHGLGAD--RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI 79 (218)
T ss_dssp EEECC---SSCCSEEEEEECCTTCC--TTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE
T ss_pred eecCC---CCCCCcEEEEEecCCCC--hhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc
Confidence 44554 45678999999997654 4467788888988 9999999997741 0000 000000 0 0001
Q ss_pred Cccc----hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh-hCCCceeEEEecCCcchhhhhccCCCCCCcee
Q 005093 537 GSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCY 611 (715)
Q Consensus 537 ~~~~----~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 611 (715)
.... .+++.++++++.+ ..++.++++++|||+||.+++.++. ++|++++++|+++|..... .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~------~------ 146 (218)
T 1auo_A 80 SLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF------G------ 146 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC------C------
T ss_pred chHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc------h------
Confidence 1112 3344455555544 3467889999999999999999999 9999999999999976430 0
Q ss_pred eeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCc
Q 005093 612 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 691 (715)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 691 (715)
+.. . .....+++|+|+++|++|..+|++.+..+++.+++.+.++++++++ ++|
T Consensus 147 ---~~~---------~--------------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH 199 (218)
T 1auo_A 147 ---DEL---------E--------------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGH 199 (218)
T ss_dssp ---TTC---------C--------------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSS
T ss_pred ---hhh---------h--------------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCC
Confidence 000 0 0013457899999999999999999999999999888899999999 999
Q ss_pred cCCCCCchHHHHHHHHHHHHHhcC
Q 005093 692 GIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
.+. .+..+.+.+||.++|+
T Consensus 200 ~~~-----~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 200 EVL-----PQEIHDIGAWLAARLG 218 (218)
T ss_dssp SCC-----HHHHHHHHHHHHHHHC
T ss_pred ccC-----HHHHHHHHHHHHHHhC
Confidence 874 3567889999999875
No 80
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.83 E-value=3.8e-20 Score=186.62 Aligned_cols=233 Identities=12% Similarity=0.050 Sum_probs=153.8
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch---HHHHHHHhCCcEEEEEcCC--CCC---------CC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS---KSLAFLSSVGYSLLIVNYR--GSL---------GF 524 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~---~~~~~la~~G~~vi~~d~r--G~~---------~~ 524 (715)
...|.++...+|.|+++. .+++|+||++||+++.. ..|. .....++++|+.|+++|.+ |.+ ++
T Consensus 30 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~ 106 (283)
T 4b6g_A 30 QTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTE--QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQ 106 (283)
T ss_dssp TTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCS--HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBT
T ss_pred hhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEEeccccccccccccccccccC
Confidence 346788999999998764 67899999999977653 2332 2346677889999999964 332 12
Q ss_pred chhhhhcCCC-CCC-ccc-hhhHH-HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh
Q 005093 525 GEEALQSLPG-KVG-SQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 600 (715)
Q Consensus 525 g~~~~~~~~~-~~~-~~~-~~d~~-~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 600 (715)
|.++...... .+. ... ...+. +++.++.+.. .+.++++|+||||||++++.++.++|++|+++++++|+++....
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~ 185 (283)
T 4b6g_A 107 SAGFYLNATEQPWAANYQMYDYILNELPRLIEKHF-PTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLV 185 (283)
T ss_dssp TBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHS-CEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGS
T ss_pred CCcccccCccCcccchhhHHHHHHHHHHHHHHHhC-CCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccC
Confidence 2222111111 000 011 12222 3444454443 24689999999999999999999999999999999998764321
Q ss_pred ccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC--CcEEEEeeCCCCcCCc-hHHHHHHHHHHHc
Q 005093 601 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPV-SNGLQYARALREK 677 (715)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~v~~-~~~~~~~~~l~~~ 677 (715)
.... ......++. ....+...+|...+.+++ +|+|++||+.|.+++. ..+..+++++++.
T Consensus 186 ~~~~----~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~ 248 (283)
T 4b6g_A 186 PWGE----KAFTAYLGK-------------DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAA 248 (283)
T ss_dssp HHHH----HHHHHHHCS-------------CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHH
T ss_pred cchh----hhHHhhcCC-------------chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHc
Confidence 0000 000000010 012233445555544443 5999999999999975 2378999999999
Q ss_pred CCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 678 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 678 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
|.+++++++++++|.+.. ....+..+++|+.++|+
T Consensus 249 g~~~~~~~~~g~~H~~~~---~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 249 NQPVDVRFHKGYDHSYYF---IASFIGEHIAYHAAFLK 283 (283)
T ss_dssp TCCCEEEEETTCCSSHHH---HHHHHHHHHHHHHTTCC
T ss_pred CCCceEEEeCCCCcCHhH---HHHHHHHHHHHHHHhcC
Confidence 999999999999998742 23567889999999885
No 81
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.83 E-value=3.8e-19 Score=172.78 Aligned_cols=184 Identities=19% Similarity=0.230 Sum_probs=138.3
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHh--CCcEEEEEcCCCCC----------------CCchhhhhcCCCCCCc
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSL----------------GFGEEALQSLPGKVGS 538 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~--~G~~vi~~d~rG~~----------------~~g~~~~~~~~~~~~~ 538 (715)
..++.|+||++||++.. ...|...+..|++ +||.|+++|++|.+ ++|.+ .....
T Consensus 20 ~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~------~~~~~ 91 (226)
T 3cn9_A 20 APNADACIIWLHGLGAD--RTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA------RAIDE 91 (226)
T ss_dssp CTTCCEEEEEECCTTCC--GGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST------TCBCH
T ss_pred CCCCCCEEEEEecCCCC--hHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc------ccccc
Confidence 55678999999997654 4567788888988 99999999988521 12211 01111
Q ss_pred cchhhHH----HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh-hCCCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 539 QDVNDVL----TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 539 ~~~~d~~----~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
..+.+.. ++++.+.+ ..++.++++|+|||+||.+++.++. ++|++++++|+++|........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------ 158 (226)
T 3cn9_A 92 DQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------ 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC------------
T ss_pred hhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh------------
Confidence 2233333 44444433 2467789999999999999999999 9999999999999976432110
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
.. ...++++|+|+++|++|..+|++.+..+++.+.+.+.++++++++ ++|.+
T Consensus 159 -----------------------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~ 210 (226)
T 3cn9_A 159 -----------------------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEV 210 (226)
T ss_dssp -----------------------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSC
T ss_pred -----------------------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCc
Confidence 00 013567899999999999999999999999999988899999999 99987
Q ss_pred CCCCchHHHHHHHHHHHHHhc
Q 005093 694 ERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~~~l 714 (715)
. .+..+.+.+||+++|
T Consensus 211 ~-----~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 211 S-----LEEIHDIGAWLRKRL 226 (226)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred c-----hhhHHHHHHHHHhhC
Confidence 4 356788999999875
No 82
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.83 E-value=2.1e-19 Score=184.98 Aligned_cols=220 Identities=15% Similarity=0.205 Sum_probs=151.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~-~~~~~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
+.++++.|.+ ++.|+||++|||++.. ....|...+..|+ +.||.|+++||||++++.. ...++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~-----------~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI-----------DDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH-----------HHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc-----------hHHHH
Confidence 5567788863 5679999999987643 2345666677776 5699999999998654321 12478
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCc----eeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
|+.++++++.++ ++.++|+|+|||+||.+++.++.++|++ ++++|+++|+.+....... ... .. .....
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~--~~~-~~-~~~~~- 221 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKD--ISD-AL-IEQDA- 221 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTT--CCH-HH-HHHCS-
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChh--HHh-hh-cccCc-
Confidence 999999999887 6789999999999999999999887766 9999999998764321100 000 00 00000
Q ss_pred CCCCCCCCCChhhH----HHHH--------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe
Q 005093 619 GKDSFTESPSVEDL----TRFH--------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 686 (715)
Q Consensus 619 ~~~~~~~~~~~~~~----~~~~--------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 686 (715)
. ...... ..+. ..+|+...-...+|+|+++|++|.. ..++..+.+++++.+.+++++++
T Consensus 222 ----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~--~~~~~~~~~~l~~~~~~~~~~~~ 292 (326)
T 3d7r_A 222 ----V---LSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT--HPDMKLFEQMMLQHHQYIEFYDY 292 (326)
T ss_dssp ----S---CCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----c---cCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc--hHHHHHHHHHHHHCCCcEEEEEe
Confidence 0 000000 1110 1123221111226999999999964 45778889999999999999999
Q ss_pred CCCCccCCC--CCchHHHHHHHHHHHHHhcC
Q 005093 687 PNDVHGIER--PQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 687 ~~~~H~~~~--~~~~~~~~~~i~~wl~~~l~ 715 (715)
++++|.+.. .+...++.+.+.+||+++++
T Consensus 293 ~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 293 PKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp TTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 999998765 24455788999999988763
No 83
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.82 E-value=5.5e-19 Score=180.56 Aligned_cols=239 Identities=14% Similarity=0.247 Sum_probs=152.0
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..+...++.+.. ..+..|+||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ......
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~----~~~~~~ 96 (315)
T 4f0j_A 28 QGQPLSMAYLDVAP--KKANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVG---FCKSSKP----AHYQYS 96 (315)
T ss_dssp TTEEEEEEEEEECC--SSCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC----SSCCCC
T ss_pred CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCC---CCCCCCC----CccccC
Confidence 44455555554432 34667999999997655 4578889999999999999999999 4444211 112345
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCC---ce-------
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD---WC------- 610 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~---~~------- 610 (715)
.+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+++|............... +.
T Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
T 4f0j_A 97 FQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTS 174 (315)
T ss_dssp HHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCC
Confidence 77888877777776 3457999999999999999999999999999999998642110000000000 00
Q ss_pred ------ee-eccCCCC-CC----------CCCCCCChh--------hHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCc
Q 005093 611 ------YV-ESYGSKG-KD----------SFTESPSVE--------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPV 664 (715)
Q Consensus 611 ------~~-~~~~~~~-~~----------~~~~~~~~~--------~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~ 664 (715)
+. ..+.... .. ......... ........+....+.++++|+|+++|++|..+|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~ 254 (315)
T 4f0j_A 175 AEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIG 254 (315)
T ss_dssp HHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTT
T ss_pred hHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcc
Confidence 00 0000000 00 000000000 0011122334456788999999999999999995
Q ss_pred hHH------------HHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 665 SNG------------LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 665 ~~~------------~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.+. .+..+.+.+....+++++++++||..... ...++.+.|.+||+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 255 KDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQ-APERFHQALLEGLQTQ 314 (315)
T ss_dssp GGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHH-SHHHHHHHHHHHHCC-
T ss_pred ccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhh-CHHHHHHHHHHHhccC
Confidence 444 44555566555678999999999986543 4457888899998753
No 84
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.82 E-value=2.8e-20 Score=185.38 Aligned_cols=230 Identities=13% Similarity=0.050 Sum_probs=149.0
Q ss_pred CCCceEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCccchH--HHHHH-HhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 460 GAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSK--SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~----~~~~~P~vv~iHGg~~~~~~~~~~~--~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
..|.++.+++|.|++++ +.++.|+||++||++.. ...|.. .+..+ ++.|+.|+++|+++++......
T Consensus 16 ~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---- 89 (263)
T 2uz0_A 16 VLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN--HNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQY---- 89 (263)
T ss_dssp TTTEEEEEEEEECC---------CCBCEEEEECCTTCC--TTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTT----
T ss_pred hhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC--HHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCC----
Confidence 35678999999998752 35789999999997755 334444 34444 5689999999998753211000
Q ss_pred CCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCce--
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC-- 610 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~-- 610 (715)
.........+|+.++++.+..+..+|.++++|+|||+||.+++.++. +|++++++++++|..+.......... .+.
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~ 167 (263)
T 2uz0_A 90 GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPESQN-LGSPA 167 (263)
T ss_dssp SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGGTT-CSCHH
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccccc-cccch
Confidence 00001111334444444443323457799999999999999999999 89999999999998765431100000 000
Q ss_pred -eeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCC--CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC
Q 005093 611 -YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 687 (715)
Q Consensus 611 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 687 (715)
....++. .. ...+...+|...+.++. +|+|++||++|.++ ..+..+++++++.|.++++++++
T Consensus 168 ~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v--~~~~~~~~~l~~~g~~~~~~~~~ 233 (263)
T 2uz0_A 168 YWRGVFGE---------IR---DWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY--EANNLAVKNLKKLGFDVTYSHSA 233 (263)
T ss_dssp HHHHHHCC---------CS---CTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH--HHHHHHHHHHHHTTCEEEEEEES
T ss_pred hHHHHcCC---------hh---hhccccCCHHHHHHhccCCCeEEEEeCCCchhh--HHHHHHHHHHHHCCCCeEEEECC
Confidence 0000000 00 01123345555566665 79999999999988 45788999999999999999999
Q ss_pred CCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 688 NDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 688 ~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+ +|.+.. ..+.+..+++||.++|+
T Consensus 234 g-~H~~~~---~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 234 G-THEWYY---WEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp C-CSSHHH---HHHHHHHHHHHSSSCCC
T ss_pred C-CcCHHH---HHHHHHHHHHHHHhhcc
Confidence 9 997642 23567889999988764
No 85
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.82 E-value=1.5e-19 Score=180.57 Aligned_cols=206 Identities=11% Similarity=-0.032 Sum_probs=144.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----cchHHHHHHHhC----CcEEEEEcCCCCCCCchhhhhc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----SYSKSLAFLSSV----GYSLLIVNYRGSLGFGEEALQS 531 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-----~~~~~~~~la~~----G~~vi~~d~rG~~~~g~~~~~~ 531 (715)
.|..+...+|.|+++...+++|+||++||++...... .+...++.|+++ ||.|+++|+++.+. ..
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~---~~--- 115 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGP---GI--- 115 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCT---TC---
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCc---cc---
Confidence 5778999999999876678899999999976543211 123346777776 59999999998432 10
Q ss_pred CCCCCCccchhh-HHHHHHHHHHcCCC--CCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCC
Q 005093 532 LPGKVGSQDVND-VLTAIDHVIDMGLA--NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD 608 (715)
Q Consensus 532 ~~~~~~~~~~~d-~~~~i~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 608 (715)
...+. ...++ +.++++++.++..+ |+++|+|+|||+||++++.++.++|++|+++++++|..+....
T Consensus 116 -~~~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~-------- 185 (268)
T 1jjf_A 116 -ADGYE-NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN-------- 185 (268)
T ss_dssp -SCHHH-HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH--------
T ss_pred -cccHH-HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch--------
Confidence 00000 11233 44566677665444 7899999999999999999999999999999999996542110
Q ss_pred ceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCC-cEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC
Q 005093 609 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 687 (715)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 687 (715)
...+.. .. . ...... |+|++||+.|..++ .+..+++.++++|.++++++++
T Consensus 186 ---~~~~~~---------~~-~-------------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~ 237 (268)
T 1jjf_A 186 ---ERLFPD---------GG-K-------------AAREKLKLLFIACGTNDSLIG--FGQRVHEYCVANNINHVYWLIQ 237 (268)
T ss_dssp ---HHHCTT---------TT-H-------------HHHHHCSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCCEEEEET
T ss_pred ---hhhcCc---------ch-h-------------hhhhcCceEEEEecCCCCCcc--HHHHHHHHHHHCCCceEEEEcC
Confidence 000000 00 0 001123 59999999999987 4678999999999999999999
Q ss_pred CCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 688 NDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 688 ~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++|.+.. ..+.+..+++||.+.
T Consensus 238 g~~H~~~~---~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 238 GGGHDFNV---WKPGLWNFLQMADEA 260 (268)
T ss_dssp TCCSSHHH---HHHHHHHHHHHHHHH
T ss_pred CCCcCHhH---HHHHHHHHHHHHHhc
Confidence 99998742 235567889998775
No 86
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.82 E-value=2.8e-20 Score=190.25 Aligned_cols=222 Identities=18% Similarity=0.219 Sum_probs=152.6
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~-~~~~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
...+| .+.+++| +. .++.|+||++|||++... ...+...+..|+ +.||.|+++||||.+++.
T Consensus 62 ~~~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~---------- 125 (311)
T 1jji_A 62 KGRNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK---------- 125 (311)
T ss_dssp EETTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC----------
T ss_pred cCCCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC----------
Confidence 33455 7888888 42 456899999999885432 346677788887 689999999999955431
Q ss_pred CCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhCCCc----eeEEEecCCcchhhhhccCCCCCC
Q 005093 536 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPD 608 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~~~~~~~~~~~~~~ 608 (715)
.....+|+.++++|+.+.. .+|+++|+|+|||+||.+++.++.+++++ ++++|+++|+.+...... .
T Consensus 126 -~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~ 199 (311)
T 1jji_A 126 -FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTP-----S 199 (311)
T ss_dssp -TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCH-----H
T ss_pred -CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCc-----c
Confidence 1224678889999988752 36778999999999999999999877665 999999999876431100 0
Q ss_pred ceeeeccCCCCCCCCCCCCChhhHHH-------------HHhcCchh-hccCCCCcEEEEeeCCCCcCCchHHHHHHHHH
Q 005093 609 WCYVESYGSKGKDSFTESPSVEDLTR-------------FHSKSPIS-HISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 674 (715)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~sp~~-~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l 674 (715)
+ ..+.. ..+ . ........ ....+|+. .+..+ +|+||++|+.|.++ .++..+++++
T Consensus 200 ~---~~~~~---~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~--~~~~~~~~~l 268 (311)
T 1jji_A 200 L---LEFGE---GLW-I-LDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR--DEGEVFGQML 268 (311)
T ss_dssp H---HHTSS---SCS-S-CCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHH
T ss_pred H---HHhcC---CCc-c-CCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch--HHHHHHHHHH
Confidence 0 00000 000 0 00000000 01123332 22222 69999999999987 5678899999
Q ss_pred HHcCCcEEEEEeCCCCccCCCC----CchHHHHHHHHHHHHH
Q 005093 675 REKGVETKVIVFPNDVHGIERP----QSDFESFLNIGLWFKK 712 (715)
Q Consensus 675 ~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~ 712 (715)
++++.+++++++++++|.+... ....++++.+.+||++
T Consensus 269 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 269 RRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999999999999999987642 2345678889999875
No 87
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.82 E-value=1.7e-19 Score=191.18 Aligned_cols=230 Identities=13% Similarity=0.097 Sum_probs=151.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..+.++++.|. ..++.|+||++||.+... ...+......|+++||.|+++|+|| +|.+...... ...
T Consensus 176 ~g~~l~~~~~~P~---~~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G---~G~s~~~~~~----~~~ 244 (415)
T 3mve_A 176 EKGKITAHLHLTN---TDKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPS---VGYSSKYPLT----EDY 244 (415)
T ss_dssp SSSEEEEEEEESC---SSSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTT---SGGGTTSCCC----SCT
T ss_pred CCEEEEEEEEecC---CCCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCC---CCCCCCCCCC----CCH
Confidence 6788999999997 356789999999965432 2234445677889999999999999 5554321111 111
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-cc-CCCCCCceeeeccCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-VG-TTDIPDWCYVESYGSK 618 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 618 (715)
......+++++.....+|.++|+|+|||+||++++.++..+|++++++|+++|+++.... .. ....+. .+...+..
T Consensus 245 ~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 322 (415)
T 3mve_A 245 SRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPK-MYLDVLAS- 322 (415)
T ss_dssp THHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCH-HHHHHHHH-
T ss_pred HHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHH-HHHHHHHH-
Confidence 233356778887777788899999999999999999999899999999999998542211 00 000000 00000000
Q ss_pred CCCCCCCCC-Ch-hhHHHHHhcCchhh----ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC-CCc
Q 005093 619 GKDSFTESP-SV-EDLTRFHSKSPISH----ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DVH 691 (715)
Q Consensus 619 ~~~~~~~~~-~~-~~~~~~~~~sp~~~----~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H 691 (715)
.+...+ .. .....+...++... +.++++|+|+++|++|.++|...+..+.+ .+.+++++++++ ..|
T Consensus 323 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~~~l~~i~g~~~h 395 (415)
T 3mve_A 323 ---RLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTYGKAKKISSKTIT 395 (415)
T ss_dssp ---HTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTTCEEEEECCCSHH
T ss_pred ---HhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCCceEEEecCCCcc
Confidence 000000 01 11112223333221 35788999999999999999888776554 556789999998 333
Q ss_pred cCCCCCchHHHHHHHHHHHHHhcC
Q 005093 692 GIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
. ...++...+.+||+++|+
T Consensus 396 ~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 396 Q-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp H-----HHHHHHHHHHHHHHHHHT
T ss_pred c-----chHHHHHHHHHHHHHHhc
Confidence 2 345788899999999874
No 88
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.82 E-value=2e-19 Score=174.38 Aligned_cols=198 Identities=15% Similarity=0.114 Sum_probs=141.6
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC-CCC----
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-GKV---- 536 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~-~~~---- 536 (715)
+.++...++.|. ..+.|+||++||++.. ...|......|++ ||.|+++|.++..+.|..+..... ...
T Consensus 15 ~~~l~~~~~~~~----~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 15 DLAFPYRLLGAG----KESRECLFLLHGSGVD--ETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSSCEEEESTT----SSCCCEEEEECCTTBC--TTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCCceEEEeCCC----CCCCCEEEEEecCCCC--HHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 344554555443 2334999999996654 3466777777865 999999998763221222211100 000
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccC
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 616 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (715)
.....+++.++++++.++..++.++++|+|||+||.+++.++.++|++++++|+++|.....
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------ 149 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------ 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc------------------
Confidence 01124566677777776645788999999999999999999999999999999999864210
Q ss_pred CCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC
Q 005093 617 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 696 (715)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 696 (715)
. . .....+++|+|+++|++|..+|.+.+. +++.+++.+.++++++++ ++|.+.
T Consensus 150 ~---------~--------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~-- 202 (223)
T 3b5e_A 150 H---------V--------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIG-- 202 (223)
T ss_dssp S---------C--------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCC--
T ss_pred c---------c--------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcC--
Confidence 0 0 012335689999999999999999999 999999999999999999 999875
Q ss_pred CchHHHHHHHHHHHHHhc
Q 005093 697 QSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 697 ~~~~~~~~~i~~wl~~~l 714 (715)
.+..+.+.+||++.+
T Consensus 203 ---~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 ---DPDAAIVRQWLAGPI 217 (223)
T ss_dssp ---HHHHHHHHHHHHCC-
T ss_pred ---HHHHHHHHHHHHhhh
Confidence 244678999998654
No 89
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=1.5e-18 Score=200.03 Aligned_cols=317 Identities=12% Similarity=0.077 Sum_probs=196.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCC--CCeEEEEe-cCCccEEEEecCcccc---------------ccccCCCcccceee
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENE--SPIQFELW-SQSQLEKEFHVPQTVH---------------GSVYADGWFEGISW 104 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~w 104 (715)
..+..++|||||++|||....+++ ...++.++ .+++..+++....... ..+.+...+..++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 457899999999999999873311 33566666 6777777765422110 00000012378999
Q ss_pred cCCCCeEEEEeecCCCCCCCccCCCCC--CCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC
Q 005093 105 NSDETLIAYVAEEPSPSKPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK 182 (715)
Q Consensus 105 SpDg~~la~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~ 182 (715)
||||++|+|.+. .....+...... ................|.|| |..++.....+|++||+++++.++++ ..
T Consensus 117 SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPD-G~~la~~~~~~i~~~d~~~g~~~~~~--~~ 190 (741)
T 2ecf_A 117 SPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPK-GGFVSFIRGRNLWVIDLASGRQMQLT--AD 190 (741)
T ss_dssp CTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTT-SSEEEEEETTEEEEEETTTTEEEECC--CC
T ss_pred CCCCCEEEEEeC---CcEEEEECCCCCcceEEEcccCCcccccccCCCC-CCEEEEEeCCcEEEEecCCCCEEEec--cC
Confidence 999999999865 111122221110 11111112223345678888 66666656679999999999988884 22
Q ss_pred CCc-----------------cceEEEecCCCCCccEEEEEeecCcccee------------eeeeee------cCCceEE
Q 005093 183 SLS-----------------VGQVVWAPLNEGLHQYLVFVGWSSETRKL------------GIKYCY------NRPCALY 227 (715)
Q Consensus 183 ~~~-----------------~~~~~~spdg~~~~~~i~~~~~~~~~~~~------------g~~~~~------~~~~~i~ 227 (715)
... ...+.|||||+. |+|.......... .....+ +....|+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~----l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA----IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSC----EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred CccceeccccceeeeeccccccceEECCCCCE----EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 211 367899999999 9998643211000 000000 1123788
Q ss_pred EEecccccchhhhhhhhccCCCC-CCceecCC---CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC
Q 005093 228 AVRVSLYKSEASELELKESSSED-LPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 303 (715)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~---~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 303 (715)
++|+ .+ ++.+.+.. ....+..++| |||++|++.+.... ....+|+++|+.++
T Consensus 267 ~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~------~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 267 VISP-----------------AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD------QKKLDLVEVTLASN 322 (741)
T ss_dssp EECS-----------------STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT------SSEEEEEEEETTTC
T ss_pred EEEC-----------------CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc------CCeEEEEEEECCCC
Confidence 9997 67 77666653 3345788999 99999999886432 23467999999887
Q ss_pred CCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeE-
Q 005093 304 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS- 382 (715)
Q Consensus 304 ~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~- 382 (715)
+.+.+..... . .|......+.|+|||+ +++++...+..+||.+|+.++ .+.++.....+...
T Consensus 323 ~~~~~~~~~~----------~-----~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~ 385 (741)
T 2ecf_A 323 QQRVLAHETS----------P-----TWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELL 385 (741)
T ss_dssp CEEEEEEEEC----------S-----SCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEE
T ss_pred ceEEEEEcCC----------C-----CcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEe
Confidence 6544332110 0 0111235778999999 777777777789999998766 77787665433333
Q ss_pred EEeecCCEEEEEEeCCCC-CCeEEEEeec
Q 005093 383 LLTLDGDNIIAVSSSPVD-VPQVKYGYFV 410 (715)
Q Consensus 383 ~~s~~~~~l~~~~~~~~~-p~~l~~~~~~ 410 (715)
.|+++++.|++....... ...||.++..
T Consensus 386 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 386 AVDEKAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp EEETTTTEEEEEECSSCTTCBEEEEEETT
T ss_pred EEeCCCCEEEEEEeCCCCceEEEEEEEcC
Confidence 589999998887754321 3356666643
No 90
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.81 E-value=3.3e-19 Score=173.15 Aligned_cols=196 Identities=13% Similarity=0.149 Sum_probs=144.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEE--cCCCCCCCchhhh-h-cCCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEAL-Q-SLPGKV 536 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~--d~rG~~~~g~~~~-~-~~~~~~ 536 (715)
+|..+. ++.|. ..++.|+||++||++.. ...|...+..|++ ||.|+++ |++| +|.+.. . .....+
T Consensus 23 ~~~~~~--~~~~~---~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~~~d~~g---~g~s~~~~~~~~~~~ 91 (226)
T 2h1i_A 23 NAMMKH--VFQKG---KDTSKPVLLLLHGTGGN--ELDLLPLAEIVDS-EASVLSVRGNVLE---NGMPRFFRRLAEGIF 91 (226)
T ss_dssp HSSSCE--EEECC---SCTTSCEEEEECCTTCC--TTTTHHHHHHHHT-TSCEEEECCSEEE---TTEEESSCEEETTEE
T ss_pred CCceeE--EecCC---CCCCCcEEEEEecCCCC--hhHHHHHHHHhcc-CceEEEecCcccC---CcchhhccccCccCc
Confidence 344453 45554 22578999999997655 4467778888877 9999999 7777 443210 0 000111
Q ss_pred C----ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 537 G----SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 537 ~----~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
. ..++.++.++++++.+...++.++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------- 158 (226)
T 2h1i_A 92 DEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------- 158 (226)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------
T ss_pred ChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------
Confidence 1 11234556666666777667889999999999999999999999999999999998753210
Q ss_pred eccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc
Q 005093 613 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
.......++|+|+++|++|..++.+.+..+++.+.+.+.++++ ++++++|.
T Consensus 159 ----------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~ 209 (226)
T 2h1i_A 159 ----------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQ 209 (226)
T ss_dssp ----------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTS
T ss_pred ----------------------------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCC
Confidence 0111234689999999999999999999999999988888888 99999998
Q ss_pred CCCCCchHHHHHHHHHHHHHhc
Q 005093 693 IERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 693 ~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+. .+..+.+.+||+++|
T Consensus 210 ~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 210 LT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp CC-----HHHHHHHHHHHHHHC
T ss_pred CC-----HHHHHHHHHHHHHhC
Confidence 74 467789999998875
No 91
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.81 E-value=2.3e-19 Score=178.95 Aligned_cols=198 Identities=19% Similarity=0.211 Sum_probs=141.4
Q ss_pred EEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhC--CcEEEEEcCCC---CCCCchhhhhc--CCCCCCcc-
Q 005093 468 IFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRG---SLGFGEEALQS--LPGKVGSQ- 539 (715)
Q Consensus 468 ~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~--G~~vi~~d~rG---~~~~g~~~~~~--~~~~~~~~- 539 (715)
+...|. .+.++.|+||++||.+.+ ...|...++.|+.+ ++.+++|+-+. ..+.|..|... ........
T Consensus 55 y~~~p~--~~~~~~plVI~LHG~G~~--~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~ 130 (285)
T 4fhz_A 55 FGRRGA--APGEATSLVVFLHGYGAD--GADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAA 130 (285)
T ss_dssp EEEEES--CTTCCSEEEEEECCTTBC--HHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHH
T ss_pred eecCCC--CCCCCCcEEEEEcCCCCC--HHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchh
Confidence 344554 367889999999995433 33455556667654 88999987431 12234433210 00000001
Q ss_pred ------chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeee
Q 005093 540 ------DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 613 (715)
Q Consensus 540 ------~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 613 (715)
...++.+.++.+.++..+|++||+|+|+|+||.+++.++.++|++++++|++++...
T Consensus 131 ~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~----------------- 193 (285)
T 4fhz_A 131 AEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLL----------------- 193 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCS-----------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCcc-----------------
Confidence 123455666666666669999999999999999999999999999999998887421
Q ss_pred ccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 614 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
...... .....++|+|++||+.|++||++.++++++.|+++|.++++++|++.||++
T Consensus 194 --------------~~~~~~---------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i 250 (285)
T 4fhz_A 194 --------------APERLA---------EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGI 250 (285)
T ss_dssp --------------CHHHHH---------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSC
T ss_pred --------------Cchhhh---------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Confidence 001100 112346899999999999999999999999999999999999999999987
Q ss_pred CCCCchHHHHHHHHHHHHHhc
Q 005093 694 ERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~~~l 714 (715)
. .+.++.+.+||+++|
T Consensus 251 ~-----~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 251 A-----PDGLSVALAFLKERL 266 (285)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred C-----HHHHHHHHHHHHHHC
Confidence 4 356788999999987
No 92
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=4.6e-18 Score=171.75 Aligned_cols=265 Identities=15% Similarity=0.142 Sum_probs=183.9
Q ss_pred cccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cC-CccEEEEecCcc
Q 005093 11 ANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-SQLEKEFHVPQT 88 (715)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 88 (715)
.+.....|+++|+.++. ..++...+ +.+..++|||||++|++..+. .++.++ .+ ++...+......
T Consensus 17 ~~~~~~~i~~~d~~~~~--~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~ 84 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK--MRVVWQTP-----ELFEAPNWSPDGKYLLLNSEG-----LLYRLSLAGDPSPEKVDTGFAT 84 (297)
T ss_dssp -CCCCEEEEEEETTTTE--EEEEEEES-----SCCEEEEECTTSSEEEEEETT-----EEEEEESSSCCSCEECCCTTCC
T ss_pred CCCcceeEEEEeCCCCc--eeeeccCC-----cceEeeEECCCCCEEEEEcCC-----eEEEEeCCCCCCceEecccccc
Confidence 45577889998776543 23343332 668999999999999997532 566665 55 555544432110
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
..+..+.|||||++|++...... ....||.++
T Consensus 85 --------~~~~~~~~spdg~~l~~~~~~~~----------------------------------------~~~~l~~~~ 116 (297)
T 2ojh_A 85 --------ICNNDHGISPDGALYAISDKVEF----------------------------------------GKSAIYLLP 116 (297)
T ss_dssp --------CBCSCCEECTTSSEEEEEECTTT----------------------------------------SSCEEEEEE
T ss_pred --------ccccceEECCCCCEEEEEEeCCC----------------------------------------CcceEEEEE
Confidence 12368999999999999764320 237899999
Q ss_pred ccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCC
Q 005093 169 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 248 (715)
Q Consensus 169 ~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (715)
+++++.+.+. ... ....+.|+|||+. |+|+...++ ...||.+++
T Consensus 117 ~~~~~~~~~~--~~~-~~~~~~~spdg~~----l~~~~~~~~------------~~~l~~~~~----------------- 160 (297)
T 2ojh_A 117 STGGTPRLMT--KNL-PSYWHGWSPDGKS----FTYCGIRDQ------------VFDIYSMDI----------------- 160 (297)
T ss_dssp TTCCCCEECC--SSS-SEEEEEECTTSSE----EEEEEEETT------------EEEEEEEET-----------------
T ss_pred CCCCceEEee--cCC-CccceEECCCCCE----EEEEECCCC------------ceEEEEEEC-----------------
Confidence 9998888773 322 3667899999999 998774322 237888886
Q ss_pred CCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcc
Q 005093 249 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 328 (715)
Q Consensus 249 ~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~ 328 (715)
.++....++........+.|||||+.|++.+..+ ....||.+++.++....++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~--------------- 217 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT--------GQMQIWRVRVDGSSVERITDSAY--------------- 217 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTT--------SSCEEEEEETTSSCEEECCCCSE---------------
T ss_pred CCCcceEcccCCCccccceECCCCCEEEEEecCC--------CCccEEEECCCCCCcEEEecCCc---------------
Confidence 6777788887777788999999999999988653 23568888876655444432211
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeC--------CeeEEEEEECCCCcEEEecC---CCCCceeEEEeecCCEEEEEEeC
Q 005093 329 GLYSSSILSNPWLSDGCTMLLSSIWG--------SSQVIISVNVSSGELLRITP---AESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 329 g~~~~~~~~~~~~~dg~~l~~~~~~~--------~~~~l~~~d~~tg~~~~l~~---~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
....+.|+|||+.|++.+... ....|+.+|+.+++.+.+.. ....+....|+++++.|++....
T Consensus 218 -----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 218 -----GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp -----EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred -----ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 123467999999888887754 34679999999988766653 23334446789999999888765
Q ss_pred CC
Q 005093 398 PV 399 (715)
Q Consensus 398 ~~ 399 (715)
..
T Consensus 293 ~~ 294 (297)
T 2ojh_A 293 PV 294 (297)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 93
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.81 E-value=5.2e-19 Score=164.34 Aligned_cols=174 Identities=11% Similarity=0.146 Sum_probs=129.4
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
++.|+||++||.+.......+......|+++||.|+++|+|| +|.+.... ......+++.++++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~----~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTD---LDARRDLG----QLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHH---HHTCGGGC----TTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCC---CCCCCCCC----CCCCHHHHHHHHHHHHHhcC--C
Confidence 467899999997655433344477888999999999999999 44432111 11112344555666776653 4
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhc
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 638 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (715)
.++++++|||+||.+++.++.++| ++++|+++|....... +
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------~----------- 113 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------P----------- 113 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB--------------------------C-----------
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc--------------------------C-----------
Confidence 579999999999999999999888 9999999886542100 0
Q ss_pred CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 639 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 639 sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
.+.++++|+|+++|++|..+|.+.+..+++.+ +++++++ +++|.+. +...++.+.+.+|+++
T Consensus 114 ----~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 114 ----ALDAAAVPISIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp ----CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred ----cccccCCCEEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 04567899999999999999999998888877 3678888 8999873 5566788888888865
No 94
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.81 E-value=5.9e-19 Score=179.89 Aligned_cols=216 Identities=17% Similarity=0.192 Sum_probs=146.3
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHhCCcEEEEEcCCCCCC---------C--ch
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSLG---------F--GE 526 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la~~G~~vi~~d~rG~~~---------~--g~ 526 (715)
..++.++.+++|.|++. .++.|+||++||+++.. ..| ......++++||.|+++|+|+... + |.
T Consensus 34 ~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp -CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 56788999999999753 34679999999977653 344 445677889999999999996411 1 11
Q ss_pred hhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC-ceeEEEecC-CcchhhhhccCC
Q 005093 527 EALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARN-PLCNLALMVGTT 604 (715)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~-~~~~~~~~~~~~ 604 (715)
+. .+.......++|+.++++++.++..+|.++|+|+|||+||.+++.++.++|+ +++++|+.+ |..++....
T Consensus 110 s~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~~~~~--- 183 (304)
T 3d0k_A 110 AG---NPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTLPTFE--- 183 (304)
T ss_dssp TS---CBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCCSSTT---
T ss_pred cC---CCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccccCCcc---
Confidence 10 0111112345789999999998866889999999999999999999999995 788888655 544321110
Q ss_pred CCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCC-----------------chHH
Q 005093 605 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVP-----------------VSNG 667 (715)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~-----------------~~~~ 667 (715)
..+ .++. ... ..+|......+.+|+|++||+.|..+. .+.+
T Consensus 184 --~~~----~~~~------~~~----------~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (304)
T 3d0k_A 184 --HRF----PEGL------DGV----------GLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARA 241 (304)
T ss_dssp --SBT----TTSS------BTT----------TCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHH
T ss_pred --ccC----cccc------CCC----------CCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHH
Confidence 000 0000 000 012323333446899999999999742 2345
Q ss_pred HHHHHHHH----HcCCc--EEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 668 LQYARALR----EKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 668 ~~~~~~l~----~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
..+++.++ +.+.+ ++++++|+++|.+. .....+.+||..
T Consensus 242 ~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~ 286 (304)
T 3d0k_A 242 RHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhh
Confidence 56677665 66776 99999999999873 456678887754
No 95
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.81 E-value=1.5e-18 Score=169.99 Aligned_cols=195 Identities=17% Similarity=0.156 Sum_probs=137.6
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhC-----CcEEEEEcCCCCC------CCchhhhhcC----CCCCCccch
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-----GYSLLIVNYRGSL------GFGEEALQSL----PGKVGSQDV 541 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~-----G~~vi~~d~rG~~------~~g~~~~~~~----~~~~~~~~~ 541 (715)
..++.|+||++||.+.. ...|...+..|+.+ |+.|+++|.++.. ..+..|.... ........+
T Consensus 19 ~~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 96 (239)
T 3u0v_A 19 AGRHSASLIFLHGSGDS--GQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESI 96 (239)
T ss_dssp SSCCCEEEEEECCTTCC--HHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHH
T ss_pred CCCCCcEEEEEecCCCc--hhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhH
Confidence 34678999999996544 44566677777665 7999999976421 1111111100 000111234
Q ss_pred hhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 542 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 542 ~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
+++.+.+..+++. ..++.++++|+|||+||.+++.++.++|++++++|+++|..+...
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 157 (239)
T 3u0v_A 97 DVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKAS------------------- 157 (239)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTC-------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchh-------------------
Confidence 4444444444432 346889999999999999999999999999999999998653210
Q ss_pred CCCCCCCCCChhhHHHHHhcCchhhccCCCCc-EEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC
Q 005093 619 GKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 697 (715)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 697 (715)
....... .....+| +|+++|++|..+|.+.+..+++.+++.+.+++++++++++|.+.
T Consensus 158 -----------~~~~~~~-------~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--- 216 (239)
T 3u0v_A 158 -----------AVYQALQ-------KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS--- 216 (239)
T ss_dssp -----------HHHHHHH-------HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---
T ss_pred -----------HHHHHHH-------hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC---
Confidence 0001110 1233456 99999999999999999999999999999999999999999886
Q ss_pred chHHHHHHHHHHHHHhcC
Q 005093 698 SDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 698 ~~~~~~~~i~~wl~~~l~ 715 (715)
.+..+.+.+||+++|.
T Consensus 217 --~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 217 --KTELDILKLWILTKLP 232 (239)
T ss_dssp --HHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHHhCC
Confidence 4678899999998863
No 96
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.81 E-value=2.4e-18 Score=172.36 Aligned_cols=230 Identities=13% Similarity=0.157 Sum_probs=143.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cc-hHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~-~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
+|.++ .+|.|++ ++.|+||++|||++..+.. .+ ......+++.||.|+++|||+.+++ ...
T Consensus 13 ~~~~~--~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----------~~p 75 (274)
T 2qru_A 13 NGATV--TIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT-----------KID 75 (274)
T ss_dssp TSCEE--EEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS-----------CHH
T ss_pred CCeeE--EEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC-----------CCc
Confidence 45555 4777752 5689999999998765433 33 3456678889999999999986543 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHh---hCCCceeEEEecCCcchhhhhccCCC-CCCceeeec
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTTD-IPDWCYVES 614 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~---~~p~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~ 614 (715)
..++|+.++++|+.++.. +.++|+|+|+|+||.+|+.++. ..+.+++++++.+|..+......... .........
T Consensus 76 ~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 2qru_A 76 HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKE 154 (274)
T ss_dssp HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGG
T ss_pred HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHH
Confidence 348999999999998742 2689999999999999999887 35778899999888776221110000 000000000
Q ss_pred cCCC-CCCCCCCCCC---hhh---------HHHHHhc--------Cch--hhccCCCCcEEEEeeCCCCcCCchHHHHHH
Q 005093 615 YGSK-GKDSFTESPS---VED---------LTRFHSK--------SPI--SHISKVKTPTIFLLGAQDLRVPVSNGLQYA 671 (715)
Q Consensus 615 ~~~~-~~~~~~~~~~---~~~---------~~~~~~~--------sp~--~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~ 671 (715)
.... .......... ... ...+... .++ ..+..+ +|+||++|+.|..++..++.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~ 233 (274)
T 2qru_A 155 IAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIG 233 (274)
T ss_dssp GTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHH
T ss_pred HhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHH
Confidence 0000 0000000000 000 0000000 001 123455 89999999999999887776665
Q ss_pred HHHHHcCCcEEEEEeCCCCccCCCCC---chHHHHHHHHHHHHHh
Q 005093 672 RALREKGVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKY 713 (715)
Q Consensus 672 ~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~i~~wl~~~ 713 (715)
+++ .+++++++++++|++.... ...++.+.+.+||+++
T Consensus 234 ~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 234 RTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp HHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 544 4689999999999985421 2235678899999764
No 97
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.80 E-value=3.9e-19 Score=175.71 Aligned_cols=190 Identities=17% Similarity=0.159 Sum_probs=138.4
Q ss_pred EEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEE--cCCCCCCCchhhhhcC-CCCCC----ccc
Q 005093 468 IFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEALQSL-PGKVG----SQD 540 (715)
Q Consensus 468 ~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~--d~rG~~~~g~~~~~~~-~~~~~----~~~ 540 (715)
+++.|. .++.|+||++||++.. ...|...+..|++ +|.|+++ |++|.++++ +.... ..... ...
T Consensus 53 ~~~~~~----~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~ 123 (251)
T 2r8b_A 53 HKSRAG----VAGAPLFVLLHGTGGD--ENQFFDFGARLLP-QATILSPVGDVSEHGAAR--FFRRTGEGVYDMVDLERA 123 (251)
T ss_dssp EEEECC----CTTSCEEEEECCTTCC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEE--SSCBCGGGCBCHHHHHHH
T ss_pred EEEeCC----CCCCcEEEEEeCCCCC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcc--cccCCCCCcCCHHHHHHH
Confidence 355554 2578999999996644 4467777778866 4999999 677743221 10000 00011 112
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 620 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (715)
++|+.++++++.++. +.++++|+|||+||.+++.++.++|++++++|+++|......
T Consensus 124 ~~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 124 TGKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------------------
Confidence 567777777776653 678999999999999999999999999999999998753210
Q ss_pred CCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchH
Q 005093 621 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 700 (715)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 700 (715)
......+++|+|+++|++|..++++.+.++++.+++++.++++ .+++++|.+. .
T Consensus 181 --------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~ 234 (251)
T 2r8b_A 181 --------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----S 234 (251)
T ss_dssp --------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----H
T ss_pred --------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----H
Confidence 0012345789999999999999999999999999987888777 5667899874 4
Q ss_pred HHHHHHHHHHHHhcC
Q 005093 701 ESFLNIGLWFKKYCK 715 (715)
Q Consensus 701 ~~~~~i~~wl~~~l~ 715 (715)
+..+.+.+||+++|+
T Consensus 235 ~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 235 GEIDAVRGFLAAYGG 249 (251)
T ss_dssp HHHHHHHHHHGGGC-
T ss_pred HHHHHHHHHHHHhcC
Confidence 567889999999874
No 98
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.80 E-value=5.7e-19 Score=179.32 Aligned_cols=237 Identities=10% Similarity=0.070 Sum_probs=142.7
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|..++++.+.|.+. ..++.|+||++||.+.. ...|...+..|+++||.|+++|+||.. |.+... ...+.
T Consensus 13 ~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~--~~~~~~~~~~L~~~G~~Vi~~D~rGh~--G~S~~~--~~~~~ 85 (305)
T 1tht_A 13 RVNNGQELHVWETPPKEN-VPFKNNTILIASGFARR--MDHFAGLAEYLSTNGFHVFRYDSLHHV--GLSSGS--IDEFT 85 (305)
T ss_dssp EETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGG--GGGGHHHHHHHHTTTCCEEEECCCBCC------------CCC
T ss_pred EcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccC--chHHHHHHHHHHHCCCEEEEeeCCCCC--CCCCCc--cccee
Confidence 345788899888877531 12356899999995543 457888999999999999999999931 444211 11121
Q ss_pred c-cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCcee--eec
Q 005093 538 S-QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY--VES 614 (715)
Q Consensus 538 ~-~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~ 614 (715)
. ...+|+.++++++.+. +.++++|+||||||.+++.+|.+ | +++++|+.++...+...........+.. ...
T Consensus 86 ~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDE 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGG
T ss_pred hHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchhh
Confidence 1 1256778888888754 34789999999999999999987 7 8999999887654321100000000000 000
Q ss_pred cCCCCCCCCCCCC--ChhhHHHHHhc------CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe
Q 005093 615 YGSKGKDSFTESP--SVEDLTRFHSK------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 686 (715)
Q Consensus 615 ~~~~~~~~~~~~~--~~~~~~~~~~~------sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 686 (715)
... .. .+.... ........... +....+.++++|+|+++|++|..+|++.+..+++.+. ...++++++
T Consensus 161 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~--~~~~~l~~i 236 (305)
T 1tht_A 161 LPN-DL-DFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR--TGHCKLYSL 236 (305)
T ss_dssp CCS-EE-EETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT--TCCEEEEEE
T ss_pred Ccc-cc-cccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcC--CCCcEEEEe
Confidence 000 00 000000 00000111111 1234577899999999999999999988777665542 235789999
Q ss_pred CCCCccCCCCCc--hHHHHHHHHHHHH
Q 005093 687 PNDVHGIERPQS--DFESFLNIGLWFK 711 (715)
Q Consensus 687 ~~~~H~~~~~~~--~~~~~~~i~~wl~ 711 (715)
+++||.+. .+. ..+++..+.+|..
T Consensus 237 ~~agH~~~-e~p~~~~~fl~~~~~~~~ 262 (305)
T 1tht_A 237 LGSSHDLG-ENLVVLRNFYQSVTKAAI 262 (305)
T ss_dssp TTCCSCTT-SSHHHHHHHHHHHHHHHH
T ss_pred CCCCCchh-hCchHHHHHHHHHHHHHH
Confidence 99999875 222 2234444555543
No 99
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=3.3e-18 Score=196.66 Aligned_cols=297 Identities=12% Similarity=0.056 Sum_probs=184.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCC-----CeEEEEe-cCCccEEEEecCcc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES-----PIQFELW-SQSQLEKEFHVPQT 88 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~ 88 (715)
...|+++|+.++.. .++.... ......+..++|||||++|||..+.++.. ..++..+ .+++.+++......
T Consensus 36 dg~i~~~d~~~g~~--~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 112 (723)
T 1xfd_A 36 KGTVRLWNVETNTS--TVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS 112 (723)
T ss_dssp SSCEEEBCGGGCCC--EEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred CCCEEEEECCCCcE--EEEeccc-cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc
Confidence 34788877766643 3332221 00001478899999999999997654221 4566555 56665444432211
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
. ..+..++|||||++|||.+. .+|+++|
T Consensus 113 -~------~~~~~~~~SPdG~~la~~~~---------------------------------------------~~i~~~~ 140 (723)
T 1xfd_A 113 -N------AKLQYAGWGPKGQQLIFIFE---------------------------------------------NNIYYCA 140 (723)
T ss_dssp -S------CCCSBCCBCSSTTCEEEEET---------------------------------------------TEEEEES
T ss_pred -c------ccccccEECCCCCEEEEEEC---------------------------------------------CeEEEEE
Confidence 0 11268999999999999732 4699999
Q ss_pred ccCCceEeecCCCCCCc------------------cceEEEecCCCCCccEEEEEeecCcccee-------------eee
Q 005093 169 INSGEVQAVKGIPKSLS------------------VGQVVWAPLNEGLHQYLVFVGWSSETRKL-------------GIK 217 (715)
Q Consensus 169 ~~~g~~~~l~~~~~~~~------------------~~~~~~spdg~~~~~~i~~~~~~~~~~~~-------------g~~ 217 (715)
+++++.++++ ...... ...+.|||||+. |+|.+......+. ...
T Consensus 141 ~~~g~~~~~~-~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~----la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 141 HVGKQAIRVV-STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR----LAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp SSSSCCEEEE-CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE----EEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred CCCCceEEEe-cCCCCCceECcccceeEEEEeccCcceEEECCCCCE----EEEEEECCCccceEEeeccCCcCCCccee
Confidence 9999888874 111111 257999999999 9998753211000 000
Q ss_pred eee------cCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC------CccccceeEcCCCCeEEEEecCCCC
Q 005093 218 YCY------NRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES------ISSAFFPRFSPDGKFLVFLSAKSSV 284 (715)
Q Consensus 218 ~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~------~~~~~~~~~spdg~~l~~~~~~~~~ 284 (715)
..+ +....|+++|+ .+++. ..++.. ...+..+.|||||+.|++...+.
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~-----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-- 276 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGL-----------------NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-- 276 (723)
T ss_dssp EECCBTTSCCCEEEEEEEES-----------------SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT--
T ss_pred ccCCCCCCCCCeeEEEEEEC-----------------CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC--
Confidence 000 11237999997 66663 666654 34577899999999887776653
Q ss_pred CCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCC-CCCCccccCCCEEEEE-eeeCC----eeE
Q 005093 285 DSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS-ILSNPWLSDGCTMLLS-SIWGS----SQV 358 (715)
Q Consensus 285 ~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~dg~~l~~~-~~~~~----~~~ 358 (715)
.....|+++|+.+++.+.+..... .. |... ...+.|+|||+.|++. +...+ ..+
T Consensus 277 -----~~~~~i~~~d~~~g~~~~~~~~~~----------~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 336 (723)
T 1xfd_A 277 -----QNVSILTLCDATTGVCTKKHEDES----------EA-----WLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH 336 (723)
T ss_dssp -----SCEEEEEEEETTTCCEEEEEEEEC----------SS-----CCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE
T ss_pred -----CCeEEEEEEeCCCCcceEEEEecc----------CC-----EEeccCCCceEcCCCCeEEEEEecccCCCcceeE
Confidence 234579999998876533321110 00 1000 1367899999988887 44455 668
Q ss_pred EEEEE-CCCCc---EEEecCCCCCce-eEEEeecCCEEEEEEeCCC-CCCeEEEEeec
Q 005093 359 IISVN-VSSGE---LLRITPAESNFS-WSLLTLDGDNIIAVSSSPV-DVPQVKYGYFV 410 (715)
Q Consensus 359 l~~~d-~~tg~---~~~l~~~~~~~~-~~~~s~~~~~l~~~~~~~~-~p~~l~~~~~~ 410 (715)
||.+| ..+++ .+.++....... ...|+++++.|++...... .-..||.+++.
T Consensus 337 l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 337 ITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 99999 56777 677775433222 2479999999988775421 33456666654
No 100
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.80 E-value=8.3e-19 Score=174.11 Aligned_cols=184 Identities=15% Similarity=0.060 Sum_probs=136.7
Q ss_pred EEEEecCCCCC-CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHH
Q 005093 467 AIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 545 (715)
Q Consensus 467 ~~l~~P~~~~~-~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~ 545 (715)
+.+|.|..... +++.|+||++||++.. ...|...+..|+++||.|+++|+|++. ...|+.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~~ 94 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAG--PSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGREML 94 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCC--GGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCC--chhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHHHHH
Confidence 67888874211 3378999999997664 467788899999999999999999631 134555
Q ss_pred HHHHHHHHc---------CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccC
Q 005093 546 TAIDHVIDM---------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 616 (715)
Q Consensus 546 ~~i~~l~~~---------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (715)
.+++++.+. ..++.++++|+||||||.+++.++ .+++++++++++|....
T Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------- 153 (258)
T 2fx5_A 95 ACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------- 153 (258)
T ss_dssp HHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------------
T ss_pred HHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------------
Confidence 566666542 235678999999999999999887 46789999988764310
Q ss_pred CCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchH-HHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 617 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
.+. ....+.++++|+|+++|++|.++|... +..+++. .+.+++++++++++|.+..
T Consensus 154 ---------~~~-----------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~ 210 (258)
T 2fx5_A 154 ---------LGH-----------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPV 210 (258)
T ss_dssp ---------TTC-----------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSST
T ss_pred ---------ccc-----------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCcccc
Confidence 000 012456788999999999999999876 6666655 4467899999999998775
Q ss_pred CCchHHHHHHHHHHHHHhc
Q 005093 696 PQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 696 ~~~~~~~~~~i~~wl~~~l 714 (715)
... ..+.+.+.+||+++|
T Consensus 211 ~~~-~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 211 GSG-GAYRGPSTAWFRFQL 228 (258)
T ss_dssp TTC-GGGHHHHHHHHHHHH
T ss_pred chH-HHHHHHHHHHHHHHh
Confidence 443 367889999998765
No 101
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.80 E-value=3.4e-19 Score=187.46 Aligned_cols=247 Identities=15% Similarity=0.183 Sum_probs=152.3
Q ss_pred cccCCCCceEEEEEEecCCCC--CCCCCcEEEEEcCCCCCCCCccch------HHHHHHHhCCcEEEEEcCCCCCCCchh
Q 005093 456 NLTKGAQKPFEAIFVSSSHKK--DCSCDPLIVVLHGGPHSVSLSSYS------KSLAFLSSVGYSLLIVNYRGSLGFGEE 527 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~--~~~~~P~vv~iHGg~~~~~~~~~~------~~~~~la~~G~~vi~~d~rG~~~~g~~ 527 (715)
.+...+|..+.++.+.|.... +.++.|+||++||.+... ..|. ..+..|+++||.|+++|+|| +|.+
T Consensus 31 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~--~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G---~G~S 105 (377)
T 1k8q_A 31 EVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA--TNWISNLPNNSLAFILADAGYDVWLGNSRG---NTWA 105 (377)
T ss_dssp EEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG--GGGSSSCTTTCHHHHHHHTTCEEEECCCTT---STTS
T ss_pred EeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch--hhhhcCCCcccHHHHHHHCCCCEEEecCCC---CCCC
Confidence 344568899998888765211 114679999999966543 2332 34558899999999999999 4444
Q ss_pred hhhcC--CC-----CCCcc-chh-hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcc
Q 005093 528 ALQSL--PG-----KVGSQ-DVN-DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLC 595 (715)
Q Consensus 528 ~~~~~--~~-----~~~~~-~~~-d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~ 595 (715)
..... +. .+... ..+ |+.++++++.+. .+.++++|+||||||.+++.++.++|+ +++++|+++|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~ 183 (377)
T 1k8q_A 106 RRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp CEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCch
Confidence 32100 00 11111 134 777788888776 245789999999999999999999998 899999999875
Q ss_pred hhhhhccCC---------------C----CCCceeee----cc------------------CC-------CCCCC-CCCC
Q 005093 596 NLALMVGTT---------------D----IPDWCYVE----SY------------------GS-------KGKDS-FTES 626 (715)
Q Consensus 596 ~~~~~~~~~---------------~----~~~~~~~~----~~------------------~~-------~~~~~-~~~~ 626 (715)
......... . .+...... .+ +. ..... +...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T 1k8q_A 184 TVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN 263 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC
T ss_pred hcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccC
Confidence 422110000 0 00000000 00 00 00000 0000
Q ss_pred CC---hh------------------------hHHHHHhcC-chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC
Q 005093 627 PS---VE------------------------DLTRFHSKS-PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 678 (715)
Q Consensus 627 ~~---~~------------------------~~~~~~~~s-p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g 678 (715)
+. .. ....+.... +...+.++++|+|+++|++|.++|++.+..+++.+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-- 341 (377)
T 1k8q_A 264 PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN-- 341 (377)
T ss_dssp CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTT--
T ss_pred CCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcC--
Confidence 00 00 001111111 1233778899999999999999999888777766643
Q ss_pred CcE-EEEEeCCCCccCCC--CCchHHHHHHHHHHHHHh
Q 005093 679 VET-KVIVFPNDVHGIER--PQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 679 ~~~-~~~~~~~~~H~~~~--~~~~~~~~~~i~~wl~~~ 713 (715)
. ++++++++||.... .+...++.+.|.+||+++
T Consensus 342 --~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 342 --LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp --EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred --cccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 4 48999999998653 455667899999999864
No 102
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.80 E-value=5.8e-19 Score=187.42 Aligned_cols=249 Identities=18% Similarity=0.214 Sum_probs=153.6
Q ss_pred cccCCCCceEEEEEEecCC---CCCCCCCcEEEEEcCCCCCCCCccchHHHHHHH----hCCc---EEEEEcCCCCCCCc
Q 005093 456 NLTKGAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS----SVGY---SLLIVNYRGSLGFG 525 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~---~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la----~~G~---~vi~~d~rG~~~~g 525 (715)
++...+|..+++..+.|.+ ..+.++.|+||++||.+.. ...|...+..|+ +.|| .|+++|+|| +|
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G---~G 98 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN---HG 98 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTT---SH
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCC---CC
Confidence 5567789999999998864 1123456899999996655 456777777887 4589 999999999 77
Q ss_pred hhhhhcCCCCCCccch----hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc
Q 005093 526 EEALQSLPGKVGSQDV----NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 601 (715)
Q Consensus 526 ~~~~~~~~~~~~~~~~----~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 601 (715)
.+.............+ +|+.++++.+.....++..+++|+||||||.+++.+|.++|++++++|+++|........
T Consensus 99 ~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 99 DSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 7654221100111223 333333333221111344569999999999999999999999999999999876531100
Q ss_pred c--CCCCCC----c--eee--------eccCCC-----CC--CCCCCCCChhhHHHHHh---------------------
Q 005093 602 G--TTDIPD----W--CYV--------ESYGSK-----GK--DSFTESPSVEDLTRFHS--------------------- 637 (715)
Q Consensus 602 ~--~~~~~~----~--~~~--------~~~~~~-----~~--~~~~~~~~~~~~~~~~~--------------------- 637 (715)
. ...... + .+. ..+... .. ..+.........+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 0 000000 0 000 000000 00 00000001111111110
Q ss_pred ---------------cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHH
Q 005093 638 ---------------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFES 702 (715)
Q Consensus 638 ---------------~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~ 702 (715)
.+....+.++++|+|+++|++|.++|++.+..+++.+. .+++++++++||.+... ...++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~e-~p~~~ 333 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIPGGSHLVNVE-APDLV 333 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEETTCCTTHHHH-SHHHH
T ss_pred chhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeCCCCccchhc-CHHHH
Confidence 01124567889999999999999999988777766653 58899999999976543 45578
Q ss_pred HHHHHHHHHHhc
Q 005093 703 FLNIGLWFKKYC 714 (715)
Q Consensus 703 ~~~i~~wl~~~l 714 (715)
.+.|.+||++++
T Consensus 334 ~~~i~~fl~~~~ 345 (398)
T 2y6u_A 334 IERINHHIHEFV 345 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 889999998765
No 103
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.79 E-value=2.3e-19 Score=171.95 Aligned_cols=193 Identities=15% Similarity=0.217 Sum_probs=138.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH--HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~--~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
.+|.+++...+.|+ ..++.|+||++||++.. ...|.. .+..|+++||.|+++|+|| +|.+..........
T Consensus 14 ~~g~~l~~~~~~p~---~~~~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~ 85 (210)
T 1imj_A 14 VQGQALFFREALPG---SGQARFSVLLLHGIRFS--SETWQNLGTLHRLAQAGYRAVAIDLPG---LGHSKEAAAPAPIG 85 (210)
T ss_dssp ETTEEECEEEEECS---SSCCSCEEEECCCTTCC--HHHHHHHTHHHHHHHTTCEEEEECCTT---SGGGTTSCCSSCTT
T ss_pred eCCeEEEEEEeCCC---CCCCCceEEEECCCCCc--cceeecchhHHHHHHCCCeEEEecCCC---CCCCCCCCCcchhh
Confidence 37888999999886 34578999999997654 445665 4788999999999999999 55554322111111
Q ss_pred cc-chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccC
Q 005093 538 SQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 616 (715)
Q Consensus 538 ~~-~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (715)
.. ..+++.++++.+ +.++++++|||+||.+++.++.++|++++++++++|.....
T Consensus 86 ~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------ 141 (210)
T 1imj_A 86 ELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------ 141 (210)
T ss_dssp SCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------------
T ss_pred hcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc------------------
Confidence 11 114455544443 34789999999999999999999999999999998864310
Q ss_pred CCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC
Q 005093 617 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 696 (715)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 696 (715)
.....+.++++|+|+++|++|. ++.+.+..+ +.+ ...+++++++++|.+...
T Consensus 142 ----------------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~----~~~~~~~~~~~~H~~~~~ 193 (210)
T 1imj_A 142 ----------------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL----PNHRVLIMKGAGHPCYLD 193 (210)
T ss_dssp ----------------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS----SSEEEEEETTCCTTHHHH
T ss_pred ----------------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC----CCCCEEEecCCCcchhhc
Confidence 0112345678999999999999 887666554 333 458899999999986533
Q ss_pred CchHHHHHHHHHHHHHh
Q 005093 697 QSDFESFLNIGLWFKKY 713 (715)
Q Consensus 697 ~~~~~~~~~i~~wl~~~ 713 (715)
. ...+.+.+.+||++.
T Consensus 194 ~-~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 194 K-PEEWHTGLLDFLQGL 209 (210)
T ss_dssp C-HHHHHHHHHHHHHTC
T ss_pred C-HHHHHHHHHHHHHhc
Confidence 3 446788899998753
No 104
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.79 E-value=1.8e-18 Score=177.93 Aligned_cols=200 Identities=13% Similarity=0.146 Sum_probs=143.1
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-------HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC----
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL---- 532 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~-------~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~---- 532 (715)
.+...++.|.+ .+.|.||++||++.. ...|. .++..|+++||.|+++|+||.+..+.......
T Consensus 49 ~~~~~~~~p~~----~~~~~vvl~HG~g~~--~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~ 122 (328)
T 1qlw_A 49 QMYVRYQIPQR----AKRYPITLIHGCCLT--GMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 122 (328)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCC--GGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred eEEEEEEccCC----CCCccEEEEeCCCCC--CCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccc
Confidence 35555677752 234679999997644 34555 47888999999999999999443322110000
Q ss_pred ------------------------CC-CCC---------ccchhh------------------HHHHHHHHHHcCCCCCc
Q 005093 533 ------------------------PG-KVG---------SQDVND------------------VLTAIDHVIDMGLANPS 560 (715)
Q Consensus 533 ------------------------~~-~~~---------~~~~~d------------------~~~~i~~l~~~~~~d~~ 560 (715)
.. .+. ...+++ +.+++..+.+.. .
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~ 198 (328)
T 1qlw_A 123 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----D 198 (328)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----T
T ss_pred cccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----C
Confidence 00 000 000222 556666666552 3
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCc
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSP 640 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 640 (715)
+++++|||+||.+++.++.++|++++++|+++|... ..+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-----------------------------------------~~~ 237 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-----------------------------------------PKP 237 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------------------CCG
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------------------CCH
Confidence 899999999999999999999999999999987430 000
Q ss_pred hhhccCCCCcEEEEeeCCCCcCCc-----hHHHHHHHHHHHcCCcEEEEEeCCCC-----ccCCCCCchHHHHHHHHHHH
Q 005093 641 ISHISKVKTPTIFLLGAQDLRVPV-----SNGLQYARALREKGVETKVIVFPNDV-----HGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 641 ~~~~~~i~~P~Lii~G~~D~~v~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~-----H~~~~~~~~~~~~~~i~~wl 710 (715)
.......++|+|+++|++|..+|. +.+..+++.++++|.++++++++++| |.+....+..++.+.+.+||
T Consensus 238 ~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl 317 (328)
T 1qlw_A 238 EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWI 317 (328)
T ss_dssp GGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHH
T ss_pred HHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHH
Confidence 111223568999999999999997 88999999999989999999999665 98877776778999999999
Q ss_pred HHhc
Q 005093 711 KKYC 714 (715)
Q Consensus 711 ~~~l 714 (715)
++++
T Consensus 318 ~~~~ 321 (328)
T 1qlw_A 318 GRNT 321 (328)
T ss_dssp HHTC
T ss_pred Hhcc
Confidence 9875
No 105
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.79 E-value=7.8e-18 Score=168.38 Aligned_cols=231 Identities=17% Similarity=0.198 Sum_probs=136.8
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|..++...+- ..|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ..
T Consensus 4 ~~~~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~ 65 (271)
T 3ia2_A 4 VAKDGTQIYFKDWG--------SGKPVLFSHGWLLD--ADMWEYQMEYLSSRGYRTIAFDRRG---FGRSDQP-----WT 65 (271)
T ss_dssp ECTTSCEEEEEEES--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTSCCC-----SS
T ss_pred EcCCCCEEEEEccC--------CCCeEEEECCCCCc--HHHHHHHHHHHHhCCceEEEecCCC---CccCCCC-----CC
Confidence 44577777644331 23568999996554 5678888899999999999999999 5554311 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhh-CCCceeEEEecCCcchhhhhccCC--CCCCce----
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTT--DIPDWC---- 610 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~~~~~~~~~~--~~~~~~---- 610 (715)
....+++.+.+..+++. .+.+++.|+||||||.+++.+++. .|++++++|++++........... ......
T Consensus 66 ~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (271)
T 3ia2_A 66 GNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARF 143 (271)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHH
Confidence 22344444444444443 245789999999999866665554 489999999988653211000000 000000
Q ss_pred ----------eeeccCCCCCCCC-CCCCChhh-------------------HHHHHhcCchhhccCCCCcEEEEeeCCCC
Q 005093 611 ----------YVESYGSKGKDSF-TESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDL 660 (715)
Q Consensus 611 ----------~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~ 660 (715)
+...+........ ........ ...+...+....+.++++|+|+++|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~ 223 (271)
T 3ia2_A 144 KTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCC
Confidence 0000000000000 00000000 00111122233467899999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 661 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 661 ~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
++|++.+.++...+ -...++++++++||.+..+ ...++.+.+.+||++
T Consensus 224 ~~p~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 224 IVPFETTGKVAAEL---IKGAELKVYKDAPHGFAVT-HAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSCGGGTHHHHHHH---STTCEEEEETTCCTTHHHH-THHHHHHHHHHHHTC
T ss_pred cCChHHHHHHHHHh---CCCceEEEEcCCCCccccc-CHHHHHHHHHHHhhC
Confidence 99988755544443 2347899999999987643 345788889999863
No 106
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.78 E-value=4.1e-18 Score=167.87 Aligned_cols=217 Identities=17% Similarity=0.218 Sum_probs=134.9
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc-chhhHHHHHHHHHHcCCCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ-DVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~-~~~d~~~~i~~l~~~~~~d~ 559 (715)
.|.||++||.+.+ ...|...+..|+++||.|+++|+|| ||.+..... .+... ..+|+.++++++.+.+ .
T Consensus 16 ~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---hG~s~~~~~--~~~~~~~~~d~~~~~~~l~~~~---~ 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGN--SADVRMLGRFLESKGYTCHAPIYKG---HGVPPEELV--HTGPDDWWQDVMNGYEFLKNKG---Y 85 (247)
T ss_dssp SCEEEEECCTTCC--THHHHHHHHHHHHTTCEEEECCCTT---SSSCHHHHT--TCCHHHHHHHHHHHHHHHHHHT---C
T ss_pred CcEEEEECCCCCC--hHHHHHHHHHHHHCCCEEEecccCC---CCCCHHHhc--CCCHHHHHHHHHHHHHHHHHcC---C
Confidence 4679999996544 4567788889999999999999999 554322111 11111 1355666667776653 3
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh---hhcc-CCCCCCceeeeccCCC------CCCCCCC--CC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---LMVG-TTDIPDWCYVESYGSK------GKDSFTE--SP 627 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~------~~~~~~~--~~ 627 (715)
+++.|+||||||.+++.+|.++| ++++|++++..... .... ...... .+....... ....+.. ..
T Consensus 86 ~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
T 1tqh_A 86 EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAR-EYKKREGKSEEQIEQEMEKFKQTPMK 162 (247)
T ss_dssp CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHH-HHHHHHTCCHHHHHHHHHHHTTSCCT
T ss_pred CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHH-HhhcccccchHHHHhhhhcccCCCHH
Confidence 68999999999999999999988 88887654432100 0000 000000 000000000 0000000 00
Q ss_pred ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHH
Q 005093 628 SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 707 (715)
Q Consensus 628 ~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 707 (715)
.......+. .+....+.++++|+|+++|++|..+|++.+..+++.+.. ..+++++++++||....++...++.+.+.
T Consensus 163 ~~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~~~~~~~~~i~ 239 (247)
T 1tqh_A 163 TLKALQELI-ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVITLDQEKDQLHEDIY 239 (247)
T ss_dssp THHHHHHHH-HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC--CceEEEEeCCCceeeccCccHHHHHHHHH
Confidence 001111110 122345678999999999999999999988888776632 34789999999998776655668899999
Q ss_pred HHHHHh
Q 005093 708 LWFKKY 713 (715)
Q Consensus 708 ~wl~~~ 713 (715)
+||++.
T Consensus 240 ~Fl~~~ 245 (247)
T 1tqh_A 240 AFLESL 245 (247)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 999863
No 107
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.78 E-value=3.2e-18 Score=170.55 Aligned_cols=222 Identities=14% Similarity=0.116 Sum_probs=137.3
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
.....|+||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ......+++..+.+..+++.-
T Consensus 8 ~~~~~~~vvllHG~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G---~G~S~~~----~~~~~~~~~~~~~~~~~l~~l- 77 (267)
T 3sty_A 8 SPFVKKHFVLVHAAFHG--AWCWYKIVALMRSSGHNVTALDLGA---SGINPKQ----ALQIPNFSDYLSPLMEFMASL- 77 (267)
T ss_dssp --CCCCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTCSCC----GGGCCSHHHHHHHHHHHHHTS-
T ss_pred CCCCCCeEEEECCCCCC--cchHHHHHHHHHhcCCeEEEecccc---CCCCCCc----CCccCCHHHHHHHHHHHHHhc-
Confidence 34567899999997654 5678889999999999999999999 5554321 111134556665555555542
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-----cCC--CCCCceee-eccCCC--C-------
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-----GTT--DIPDWCYV-ESYGSK--G------- 619 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----~~~--~~~~~~~~-~~~~~~--~------- 619 (715)
-+.+++.|+|||+||.+++.++.++|++++++|++++........ ... ....|... ..+... .
T Consensus 78 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (267)
T 3sty_A 78 PANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIA 157 (267)
T ss_dssp CTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEEC
T ss_pred CCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhh
Confidence 146899999999999999999999999999999988864321100 000 00011000 000000 0
Q ss_pred -----CCCCCCCCChhhHHHH---------------HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCC
Q 005093 620 -----KDSFTESPSVEDLTRF---------------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 679 (715)
Q Consensus 620 -----~~~~~~~~~~~~~~~~---------------~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~ 679 (715)
...+............ ............++|+|+++|++|..+|++....+.+.+ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~ 233 (267)
T 3sty_A 158 GPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN----P 233 (267)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS----C
T ss_pred hHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC----C
Confidence 0000001111111111 001111111222589999999999999888777666655 3
Q ss_pred cEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 680 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 680 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.+++++++++||..... ...++.+.|.+|++++
T Consensus 234 ~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 234 PDEVKEIEGSDHVTMMS-KPQQLFTTLLSIANKY 266 (267)
T ss_dssp CSEEEECTTCCSCHHHH-SHHHHHHHHHHHHHHC
T ss_pred CceEEEeCCCCcccccc-ChHHHHHHHHHHHHhc
Confidence 37899999999986543 4457888999999874
No 108
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.78 E-value=4e-18 Score=176.70 Aligned_cols=244 Identities=16% Similarity=0.088 Sum_probs=148.6
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-cc-----chHHHHHHH-hCCcEEEEEcCCCCCCCchhhhhcCCC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SS-----YSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPG 534 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~-~~-----~~~~~~~la-~~G~~vi~~d~rG~~~~g~~~~~~~~~ 534 (715)
...+.|+++.|.+. .++.|+|++.||....... .. ....+..|+ ++||+|+++||||.++.+.... ..
T Consensus 57 ~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~---~~ 131 (377)
T 4ezi_A 57 LTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLH---PY 131 (377)
T ss_dssp EEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSC---CT
T ss_pred EEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCc---cc
Confidence 35688999999853 4678999999996542211 11 113456678 9999999999999655432110 00
Q ss_pred CCCc---cchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhhCCC-----ceeEEEecCCcchhhhhccCCC
Q 005093 535 KVGS---QDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTD 605 (715)
Q Consensus 535 ~~~~---~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~~~~~~~~~~~ 605 (715)
.... ..+.|..+++..+.+. +..+.++|+++|||+||++++.++..+|+ .+++++..+++.++........
T Consensus 132 ~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~~~~~ 211 (377)
T 4ezi_A 132 VQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVM 211 (377)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHHHHHh
Confidence 0011 1233333333333333 32356899999999999999999876543 5889999998887643211000
Q ss_pred ---CCC---c----------------eeeeccCCCC-------CC----------CCCCCC----ChhhHHHHH-hcCc-
Q 005093 606 ---IPD---W----------------CYVESYGSKG-------KD----------SFTESP----SVEDLTRFH-SKSP- 640 (715)
Q Consensus 606 ---~~~---~----------------~~~~~~~~~~-------~~----------~~~~~~----~~~~~~~~~-~~sp- 640 (715)
.+. + .....+.... .. .+.... .....+.+. ..+|
T Consensus 212 ~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 291 (377)
T 4ezi_A 212 LEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRN 291 (377)
T ss_dssp HSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTT
T ss_pred cCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchH
Confidence 000 0 0000000000 00 000000 000000011 0122
Q ss_pred hh--------hccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC--CCccCCCCCchHHHHHHHHHHH
Q 005093 641 IS--------HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN--DVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 641 ~~--------~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~~~~~~~~~~~~~i~~wl 710 (715)
+. .-.++++|+|++||+.|.+||+.++.++++++++.|. ++++.+++ .+|... .......+++||
T Consensus 292 ~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~----~~~~~~~~~~wl 366 (377)
T 4ezi_A 292 TEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA----HPFVLKEQVDFF 366 (377)
T ss_dssp HHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT----HHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh----HHHHHHHHHHHH
Confidence 10 0125678999999999999999999999999999999 99999999 889653 346778899999
Q ss_pred HHhcC
Q 005093 711 KKYCK 715 (715)
Q Consensus 711 ~~~l~ 715 (715)
+++++
T Consensus 367 ~~~~~ 371 (377)
T 4ezi_A 367 KQFER 371 (377)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 98763
No 109
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.78 E-value=1e-17 Score=168.03 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=138.1
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+|..++...+-|+ ..|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 6 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~vi~~D~~G---~G~S~~~-----~~~ 69 (276)
T 1zoi_A 6 TKDGVQIFYKDWGPR------DAPVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRG---HGRSSQV-----WDG 69 (276)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred CCCCcEEEEEecCCC------CCCeEEEECCCCcc--hhHHHHHHHHHHhCCCEEEEecCCC---CCCCCCC-----CCC
Confidence 346777765554332 34789999996554 5678888999999999999999999 5555321 111
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhccCC--CCCCce-----
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT--DIPDWC----- 610 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~~~--~~~~~~----- 610 (715)
..++++.+.+..+++. ++.+++.|+||||||.+++.+++++ |++++++|++++........... ......
T Consensus 70 ~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (276)
T 1zoi_A 70 HDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQ 147 (276)
T ss_dssp CSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHH
Confidence 2344444444444443 2346899999999999999877777 99999999988643211000000 000000
Q ss_pred ---------eeeccC--CC-CCCCCCCCCChhhHHH-------------------HHhcCchhhccCCCCcEEEEeeCCC
Q 005093 611 ---------YVESYG--SK-GKDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 611 ---------~~~~~~--~~-~~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~Lii~G~~D 659 (715)
....+. .. ................ +...+....+.++++|+|+++|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D 227 (276)
T 1zoi_A 148 AQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDD 227 (276)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCC
Confidence 000000 00 0000000000111111 1112223346678999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..+|++...+.+..+ -...++++++++||....+ ...++.+.|.+|++
T Consensus 228 ~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 228 QIVPYENSGVLSAKL---LPNGALKTYKGYPHGMPTT-HADVINADLLAFIR 275 (276)
T ss_dssp SSSCSTTTHHHHHHH---STTEEEEEETTCCTTHHHH-THHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHhh---CCCceEEEcCCCCCchhhh-CHHHHHHHHHHHhc
Confidence 999987443333322 2358899999999987543 45578888999985
No 110
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.77 E-value=1.8e-17 Score=166.11 Aligned_cols=231 Identities=15% Similarity=0.191 Sum_probs=138.2
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+|..++...+-|+ +.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 5 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~~ 68 (275)
T 1a88_A 5 TSDGTNIFYKDWGPR------DGLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRG---HGRSDQP-----STG 68 (275)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred ccCCCEEEEEEcCCC------CCceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCc---CCCCCCC-----CCC
Confidence 346777765544332 34789999996544 5578888899999999999999999 5554311 111
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhccCC--CCCCce-----
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT--DIPDWC----- 610 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~~~--~~~~~~----- 610 (715)
..++++.+.+..+++. ++.+++.|+||||||.+++.+++++ |++++++|++++........... ......
T Consensus 69 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (275)
T 1a88_A 69 HDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFR 146 (275)
T ss_dssp CSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHH
Confidence 2344444444444443 2346899999999999998877776 99999999988643211000000 000000
Q ss_pred ---------eeeccC--C-CCCCCCCCCCChhhHHH-------------------HHhcCchhhccCCCCcEEEEeeCCC
Q 005093 611 ---------YVESYG--S-KGKDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 611 ---------~~~~~~--~-~~~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~Lii~G~~D 659 (715)
....+. . ...............+. +...+....+.++++|+|+++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 226 (275)
T 1a88_A 147 AALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCC
Confidence 000000 0 00000000001111110 1112223346678999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..+|+....+.+..+ ...+++++++++||..... ...++.+.|.+|++
T Consensus 227 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 227 QVVPYADAAPKSAEL---LANATLKSYEGLPHGMLST-HPEVLNPDLLAFVK 274 (275)
T ss_dssp SSSCSTTTHHHHHHH---STTEEEEEETTCCTTHHHH-CHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHhh---CCCcEEEEcCCCCccHHHh-CHHHHHHHHHHHhh
Confidence 999987544433322 2358899999999987643 45578888999986
No 111
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=4.3e-18 Score=179.90 Aligned_cols=188 Identities=15% Similarity=0.139 Sum_probs=120.7
Q ss_pred ccceeecC-CCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEee
Q 005093 99 FEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 177 (715)
Q Consensus 99 ~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l 177 (715)
+..+.||| ||++|+|.+..... . ....||++|+++++.+.+
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~---------------------------------~-----~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHD---------------------------------L-----VDARMWLINEDGTNMRKV 231 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTT---------------------------------T-----SSCSEEEEETTSCCCEES
T ss_pred ccccEECCCCCCEEEEEEecCCC---------------------------------C-----CcceEEEEeCCCCceEEe
Confidence 46789999 99999998753210 0 236799999999998888
Q ss_pred cCCCCC--CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee
Q 005093 178 KGIPKS--LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN 255 (715)
Q Consensus 178 ~~~~~~--~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (715)
+ ... .....+.|||||+. |+|.+...+. ....||++|+ ++++.+.
T Consensus 232 ~--~~~~~~~~~~~~~spdg~~----l~~~~~~~~~----------~~~~l~~~d~-----------------~~g~~~~ 278 (388)
T 3pe7_A 232 K--THAEGESCTHEFWVPDGSA----LVYVSYLKGS----------PDRFIYSADP-----------------ETLENRQ 278 (388)
T ss_dssp C--CCCTTEEEEEEEECTTSSC----EEEEEEETTC----------CCEEEEEECT-----------------TTCCEEE
T ss_pred e--eCCCCcccccceECCCCCE----EEEEecCCCC----------CcceEEEEec-----------------CCCceEE
Confidence 4 332 24567899999999 9998754321 1125999997 7787777
Q ss_pred cCCCCc------cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 256 LTESIS------SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 256 lt~~~~------~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
++.... ....+.|||||++|+|...+.... ......+||++|+.+++.+.++........ +.+
T Consensus 279 l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~--~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~---------~~~ 347 (388)
T 3pe7_A 279 LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGY--KIENDPFLYVFNMKNGTQHRVARHDTSWKV---------FEG 347 (388)
T ss_dssp EEEECCEEEEEECTTSSEEEEEECCC--------------CCCCEEEEEETTTTEEEEEEECCCCCCC---------BTT
T ss_pred EEcCCCceeeeecCCCCeEccCCCcceeEeeecccc--ccCCCCEEEEEeccCCceEEeccccCcccc---------ccc
Confidence 755333 133458999999999876542100 002245799999988776555432210000 000
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
........++|+|||+.|++.+...+...||.+++..+.
T Consensus 348 ~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 348 DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESV 386 (388)
T ss_dssp BSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGG
T ss_pred ccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhc
Confidence 000024567899999999999988888999999987553
No 112
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=2.2e-18 Score=164.18 Aligned_cols=188 Identities=13% Similarity=0.066 Sum_probs=120.0
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhC--CcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~--G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
.|+|||+||...+........+.++++++ +|.|++||++| +|.+ ..+.++.++.. .+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~---~g~~----------------~~~~l~~~~~~--~~ 60 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPP---YPAE----------------AAEMLESIVMD--KA 60 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCS---SHHH----------------HHHHHHHHHHH--HT
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCC---CHHH----------------HHHHHHHHHHh--cC
Confidence 38999999944333222223345566665 59999999998 5433 23334444433 24
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhc
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 638 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (715)
.++|+|+|+||||.+|+.+|.++|....+++...+........... ...... ...+. ....... ...
T Consensus 61 ~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~--~~~~~~~--~~~ 127 (202)
T 4fle_A 61 GQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGE-------NQNPYT--GQKYV--LESRHIY--DLK 127 (202)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEE-------EECTTT--CCEEE--ECHHHHH--HHH
T ss_pred CCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhh-------hccccc--ccccc--chHHHHH--HHH
Confidence 6899999999999999999999998887777666654432211100 000000 00000 0011111 122
Q ss_pred CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 639 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 639 sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
.....+.++++|+|++||++|.+||++++.++++ .+++++++|++|.+... .++++.|.+||+.
T Consensus 128 ~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~~ 191 (202)
T 4fle_A 128 AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLGL 191 (202)
T ss_dssp TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHTC
T ss_pred hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHhh
Confidence 3334566788999999999999999998877653 36899999999987543 3567889999863
No 113
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.77 E-value=2.4e-17 Score=164.93 Aligned_cols=229 Identities=17% Similarity=0.249 Sum_probs=137.3
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+|.+++...+ + ..|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 5 ~~~g~~l~y~~~------g--~~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~-----~~~ 66 (273)
T 1a8s_A 5 TRDGTQIYYKDW------G--SGQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRG---HGRSSQP-----WSG 66 (273)
T ss_dssp CTTSCEEEEEEE------S--CSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred cCCCcEEEEEEc------C--CCCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCC---CCCCCCC-----CCC
Confidence 346667753332 1 34679999996654 5678888899999999999999999 5554311 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhccCC--CCCCcee----
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT--DIPDWCY---- 611 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~---- 611 (715)
..+++..+.+..+++. ++.+++.|+||||||.+++.+++++ |++++++|++++........... .......
T Consensus 67 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (273)
T 1a8s_A 67 NDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIR 144 (273)
T ss_dssp CSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHH
Confidence 2355555555555544 2457899999999999998877665 89999999988643110000000 0000000
Q ss_pred ----------eeccC--CC-CCCCCCCCCChhhHHH-------------------HHhcCchhhccCCCCcEEEEeeCCC
Q 005093 612 ----------VESYG--SK-GKDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 612 ----------~~~~~--~~-~~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~Lii~G~~D 659 (715)
...+. .. ................ +...+....+.++++|+|+++|++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 224 (273)
T 1a8s_A 145 QASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDAD 224 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTC
T ss_pred HHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCC
Confidence 00000 00 0000000000010000 1112233456789999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..+|++...+.+..+ -..+++++++++||..... ...++.+.|.+||+
T Consensus 225 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 225 QVVPIEASGIASAAL---VKGSTLKIYSGAPHGLTDT-HKDQLNADLLAFIK 272 (273)
T ss_dssp SSSCSTTTHHHHHHH---STTCEEEEETTCCSCHHHH-THHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHh---CCCcEEEEeCCCCCcchhh-CHHHHHHHHHHHHh
Confidence 999987544433332 2347899999999987543 45578888999986
No 114
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.77 E-value=1.1e-17 Score=166.01 Aligned_cols=222 Identities=13% Similarity=0.152 Sum_probs=142.2
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
+...+|.++.....- +.|.||++||++.. ...|...+..|+ +||.|+++|+|| +|.+...
T Consensus 7 ~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~-~~~~vi~~d~~G---~G~S~~~------ 66 (262)
T 3r0v_A 7 VPSSDGTPIAFERSG--------SGPPVVLVGGALST--RAGGAPLAERLA-PHFTVICYDRRG---RGDSGDT------ 66 (262)
T ss_dssp EECTTSCEEEEEEEE--------CSSEEEEECCTTCC--GGGGHHHHHHHT-TTSEEEEECCTT---STTCCCC------
T ss_pred EEcCCCcEEEEEEcC--------CCCcEEEECCCCcC--hHHHHHHHHHHh-cCcEEEEEecCC---CcCCCCC------
Confidence 344577788754432 24789999997655 456778888887 899999999999 5544321
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCce--eeec
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--YVES 614 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~ 614 (715)
.....++..+.+..+++.. + +++.++|||+||.+++.++.++| +++++|+++|............ ..+. ....
T Consensus 67 ~~~~~~~~~~~~~~~~~~l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~ 141 (262)
T 3r0v_A 67 PPYAVEREIEDLAAIIDAA--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVP-PDYQTRLDAL 141 (262)
T ss_dssp SSCCHHHHHHHHHHHHHHT--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCC-TTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhh-hHHHHHHHHH
Confidence 1234666666666666653 4 78999999999999999999999 9999999998654321110000 0000 0000
Q ss_pred cCC--------CCCCCCCCCCChhhHHHHH------------------------hcCchhhccCCCCcEEEEeeCCCCcC
Q 005093 615 YGS--------KGKDSFTESPSVEDLTRFH------------------------SKSPISHISKVKTPTIFLLGAQDLRV 662 (715)
Q Consensus 615 ~~~--------~~~~~~~~~~~~~~~~~~~------------------------~~sp~~~~~~i~~P~Lii~G~~D~~v 662 (715)
+.. .........+ ....+.+. ...+...+.++++|+|+++|++|..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 220 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGVP-PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAW 220 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCCC-HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHH
T ss_pred hhccchhhHHHHHhhcccCCC-HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCC
Confidence 000 0000000000 01111111 11234567788999999999999999
Q ss_pred CchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 663 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 663 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
|++.+..+.+.+. .+++++++++|| + +...++.+.+.+||++
T Consensus 221 ~~~~~~~~~~~~~----~~~~~~~~~~gH-~---~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 221 IRHTAQELADTIP----NARYVTLENQTH-T---VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHHHHST----TEEEEECCCSSS-S---CCHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHhCC----CCeEEEecCCCc-c---cCHHHHHHHHHHHHhC
Confidence 8887777766653 478999999999 3 3456788889999863
No 115
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.77 E-value=1.2e-17 Score=166.72 Aligned_cols=219 Identities=15% Similarity=0.208 Sum_probs=139.9
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
...|.||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+... ......++++.+.+..+++.- .
T Consensus 13 ~~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~l--~ 80 (268)
T 3v48_A 13 ADAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRG---TGNNPDT----LAEDYSIAQMAAELHQALVAA--G 80 (268)
T ss_dssp TTCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTT---BTTBCCC----CCTTCCHHHHHHHHHHHHHHT--T
T ss_pred CCCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCC---CCCCCCC----ccccCCHHHHHHHHHHHHHHc--C
Confidence 356899999996654 5678888888854 69999999999 6655311 111234667776666666653 3
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-----------CCCCCCce-------eeeccCCCCC
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TTDIPDWC-------YVESYGSKGK 620 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-----------~~~~~~~~-------~~~~~~~~~~ 620 (715)
.+++.|+||||||.+++.+|.++|++++++|++++......... ......+. +...+.....
T Consensus 81 ~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3v48_A 81 IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARA 160 (268)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTH
T ss_pred CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhccc
Confidence 47899999999999999999999999999999887532110000 00000000 0000000000
Q ss_pred --------CCCCCCCChh----hHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 621 --------DSFTESPSVE----DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 621 --------~~~~~~~~~~----~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
.......... ....+...+....+.++++|+|+++|++|..+|++.+..+.+.+. ..+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p----~~~~~~~~~ 236 (268)
T 3v48_A 161 PRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALP----DSQKMVMPY 236 (268)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEESS
T ss_pred ccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCC----cCeEEEeCC
Confidence 0000000000 011112223334577899999999999999999988877776663 478999999
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 689 DVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+||....+ ....+.+.|.+|+.+.+
T Consensus 237 ~GH~~~~e-~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 237 GGHACNVT-DPETFNALLLNGLASLL 261 (268)
T ss_dssp CCTTHHHH-CHHHHHHHHHHHHHHHH
T ss_pred CCcchhhc-CHHHHHHHHHHHHHHhc
Confidence 99976543 44578889999998653
No 116
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.77 E-value=1.9e-18 Score=171.14 Aligned_cols=219 Identities=16% Similarity=0.127 Sum_probs=137.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... .......++..+.+..+++.-.. .+
T Consensus 4 g~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~----~~~~~~~~~~~~~l~~~l~~l~~-~~ 73 (258)
T 3dqz_A 4 KHHFVLVHNAYHG--AWIWYKLKPLLESAGHRVTAVELAA---SGIDPRP----IQAVETVDEYSKPLIETLKSLPE-NE 73 (258)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSSC----GGGCCSHHHHHHHHHHHHHTSCT-TC
T ss_pred CCcEEEECCCCCc--cccHHHHHHHHHhCCCEEEEecCCC---CcCCCCC----CCccccHHHhHHHHHHHHHHhcc-cC
Confidence 3899999997654 5568888999999999999999999 5544311 01113455666555555554322 37
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-------CCCCCCce---ee--e---------ccCCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-------TTDIPDWC---YV--E---------SYGSKG 619 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~---~~--~---------~~~~~~ 619 (715)
++.|+|||+||.+++.++.++|++++++|+++|......... ......|. .. . .+....
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKF 153 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHH
Confidence 899999999999999999999999999999988543211000 00000010 00 0 000000
Q ss_pred -CCCCCCCCChhhHHHHH--------------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 620 -KDSFTESPSVEDLTRFH--------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 620 -~~~~~~~~~~~~~~~~~--------------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
...+............. ...........++|+|+++|++|..+|++.+..+.+.+. ..+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~ 229 (258)
T 3dqz_A 154 MKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFN----VSKVY 229 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSC----CSCEE
T ss_pred HHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCC----cccEE
Confidence 00000111111111111 011112222235899999999999999988877776653 35788
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+++++||.... +...++.+.|.+|+++|+
T Consensus 230 ~~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 230 EIDGGDHMVML-SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp EETTCCSCHHH-HSHHHHHHHHHHHHHHTC
T ss_pred EcCCCCCchhh-cChHHHHHHHHHHHHHhC
Confidence 99999998664 345578899999999875
No 117
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.77 E-value=1.7e-17 Score=166.15 Aligned_cols=227 Identities=15% Similarity=0.167 Sum_probs=138.2
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
..+|.+++...+ + +.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 5 ~~~g~~l~y~~~------g--~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~~ 66 (274)
T 1a8q_A 5 TRDGVEIFYKDW------G--QGRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRG---HGHSTPV-----WDG 66 (274)
T ss_dssp CTTSCEEEEEEE------C--SSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred ccCCCEEEEEec------C--CCceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCC---CCCCCCC-----CCC
Confidence 346666654332 1 34679999996554 5578888899999999999999999 5554311 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhccCCCCCCc--eee---
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTTDIPDW--CYV--- 612 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~--- 612 (715)
..+++..+.+..+++. ++.+++.|+||||||.+++.+++++ |++++++|++++......... ...... ...
T Consensus 67 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~ 143 (274)
T 1a8q_A 67 YDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSD-KNPDGVPDEVFDAL 143 (274)
T ss_dssp CSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCS-SCTTSBCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccc-cCcccchHHHHHHH
Confidence 2355555555555544 2457899999999999999877765 899999999886431100000 000000 000
Q ss_pred ----------------eccCCCCCCCCCCCCChhhHH-------------------HHHhcCchhhccCCCCcEEEEeeC
Q 005093 613 ----------------ESYGSKGKDSFTESPSVEDLT-------------------RFHSKSPISHISKVKTPTIFLLGA 657 (715)
Q Consensus 613 ----------------~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~sp~~~~~~i~~P~Lii~G~ 657 (715)
..+... ............. .+...+....+.++++|+|+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 221 (274)
T 1a8q_A 144 KNGVLTERSQFWKDTAEGFFSA--NRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGD 221 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT--TSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEET
T ss_pred HHHhhccHHHHHHHhccccccc--ccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecC
Confidence 000000 0000000000000 111123334567899999999999
Q ss_pred CCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC-CchHHHHHHHHHHHH
Q 005093 658 QDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFK 711 (715)
Q Consensus 658 ~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~wl~ 711 (715)
+|..+|++...+..... ...+++++++++||..... +...++.+.|.+||+
T Consensus 222 ~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 222 DDQVVPIDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred cCCCCCcHHHHHHHHhh---CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 99999987544433322 2357899999999987654 255678888999985
No 118
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.77 E-value=2.3e-17 Score=172.83 Aligned_cols=247 Identities=12% Similarity=0.149 Sum_probs=151.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----------cchHHHH---HHHhCCcEEEEEcCCC--CCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------SYSKSLA---FLSSVGYSLLIVNYRG--SLGF 524 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-----------~~~~~~~---~la~~G~~vi~~d~rG--~~~~ 524 (715)
+|..++...+-+. .....|+||++||.+...... .|...+. .|+++||.|+++|+|| .+..
T Consensus 29 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s 105 (366)
T 2pl5_A 29 SPVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSS 105 (366)
T ss_dssp SSEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cCceeeEEeccCc---CCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCC
Confidence 4556665555443 223468999999976554310 3444442 4557899999999999 3333
Q ss_pred chhhhhcC-CC----CCCccchhhHHHHHHHHHHcCCCCCceE-EEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh
Q 005093 525 GEEALQSL-PG----KVGSQDVNDVLTAIDHVIDMGLANPSKV-TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 598 (715)
Q Consensus 525 g~~~~~~~-~~----~~~~~~~~d~~~~i~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 598 (715)
+....... .. ......++++.+.+..+++. ++.+++ .|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 183 (366)
T 2pl5_A 106 GPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHS 183 (366)
T ss_dssp STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCC
T ss_pred CCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCC
Confidence 21110000 00 00123567777777777665 345788 899999999999999999999999999999865421
Q ss_pred hhc---------cCCCCCCc-----------------------------eeeeccCCC-----------CCC--------
Q 005093 599 LMV---------GTTDIPDW-----------------------------CYVESYGSK-----------GKD-------- 621 (715)
Q Consensus 599 ~~~---------~~~~~~~~-----------------------------~~~~~~~~~-----------~~~-------- 621 (715)
... .....+.| .+...+... ...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (366)
T 2pl5_A 184 AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGE 263 (366)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTC
T ss_pred CccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHH
Confidence 100 00000000 000000000 000
Q ss_pred CCCCCCChhhH----HHHHhcC------chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe-CCCC
Q 005093 622 SFTESPSVEDL----TRFHSKS------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF-PNDV 690 (715)
Q Consensus 622 ~~~~~~~~~~~----~~~~~~s------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~-~~~~ 690 (715)
.+......... ..+...+ ....+.++++|+|+++|++|.++|++.+..+.+.+...+..++++++ +++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 343 (366)
T 2pl5_A 264 SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEG 343 (366)
T ss_dssp CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBS
T ss_pred hhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCC
Confidence 00000011111 1111111 12267789999999999999999999999999999876667899999 8999
Q ss_pred ccCCCCCchHHHHHHHHHHHHHh
Q 005093 691 HGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 691 H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
|...... ..++.+.|.+||+++
T Consensus 344 H~~~~e~-p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 344 HDSFLLK-NPKQIEILKGFLENP 365 (366)
T ss_dssp SGGGGSC-CHHHHHHHHHHHHCC
T ss_pred cchhhcC-hhHHHHHHHHHHccC
Confidence 9876544 358889999999764
No 119
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.77 E-value=1.1e-18 Score=189.66 Aligned_cols=243 Identities=13% Similarity=0.093 Sum_probs=157.9
Q ss_pred ccccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----------------c---c-hHHHHHHHhCCcEE
Q 005093 455 ANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------------S---Y-SKSLAFLSSVGYSL 513 (715)
Q Consensus 455 ~~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-----------------~---~-~~~~~~la~~G~~v 513 (715)
+.++..||.+|.+.+|+|++ .++.|+||+.||.+...... . | ....+.|+++||+|
T Consensus 44 v~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~v 120 (560)
T 3iii_A 44 GTVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVV 120 (560)
T ss_dssp EEEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEE
T ss_pred EEEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEE
Confidence 35566789999999999983 57899999999844432110 0 0 01367899999999
Q ss_pred EEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCC
Q 005093 514 LIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 593 (715)
Q Consensus 514 i~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 593 (715)
+++|+||.++++..+. .++....+|+.++|+|+.+++..+ .+|+++|+|+||++++.+|+.+|+.++|+|+.+|
T Consensus 121 v~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~ 194 (560)
T 3iii_A 121 VKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEG 194 (560)
T ss_dssp EEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESC
T ss_pred EEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEEEecCC
Confidence 9999999777665442 233456899999999999987776 8999999999999999999999999999999999
Q ss_pred cchhhhhc---cCCCCCCce-e-e----eccCC-CCCC----CCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCC
Q 005093 594 LCNLALMV---GTTDIPDWC-Y-V----ESYGS-KGKD----SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQD 659 (715)
Q Consensus 594 ~~~~~~~~---~~~~~~~~~-~-~----~~~~~-~~~~----~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D 659 (715)
+.++..-. +......+. + . ..+.. .... .+...+..+ +.|...++ .+.+|++|+|+++|..|
T Consensus 195 ~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d--~~W~~~~~--~~~~I~vPvl~v~Gw~D 270 (560)
T 3iii_A 195 LNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD--DFWKQRQV--PLSQIKTPLLTCASWST 270 (560)
T ss_dssp CCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC--HHHHTTBC--CGGGCCSCEEEEEEGGG
T ss_pred cccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc--hHhhccCC--chhhCCCCEEEeCCcCC
Confidence 98865311 100000000 0 0 00000 0000 000011111 12333333 57899999999999999
Q ss_pred CcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 660 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 660 ~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
..+....+.+.+++++.. ...+++.. .+|.... -..+..+..++||++|||
T Consensus 271 ~~~~~~g~l~~y~~l~~~--~k~l~ih~-~~~~~~~--~~~~~~~~~~~wfD~~Lk 321 (560)
T 3iii_A 271 QGLHNRGSFEGFKQAASE--EKWLYVHG-RKEWESY--YARENLERQKSFFDFYLK 321 (560)
T ss_dssp TTTTHHHHHHHHHHCCCS--SEEEEEES-SCHHHHH--HSHHHHHHHHHHHHHHTS
T ss_pred CcccchhHHHHHHhcccc--CcEEEECC-CCCcCcc--cChhHHHHHHHHHHHHhC
Confidence 755556666667666432 22333322 2232100 012456789999999996
No 120
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.77 E-value=4.8e-18 Score=172.76 Aligned_cols=240 Identities=14% Similarity=0.106 Sum_probs=149.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC--CCC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKV 536 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~--~~~ 536 (715)
+.++..+ +.|. + +++|+||++||++.......|.. ..+.+++.|+.|+++|++++..|.. +..... +..
T Consensus 20 ~~~i~v~-~~p~-~---~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~-~~~~~~~~g~~ 93 (304)
T 1sfr_A 20 GRDIKVQ-FQSG-G---ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSD-WYQPACGKAGC 93 (304)
T ss_dssp TEEEEEE-EECC-S---TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCB-CSSCEEETTEE
T ss_pred CCceEEE-ECCC-C---CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccc-cCCcccccccc
Confidence 4567655 4443 2 67999999999743222334443 2466778899999999987533321 100000 000
Q ss_pred CccchhhH--HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 537 GSQDVNDV--LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 537 ~~~~~~d~--~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
.....++. .+++.++.++..+++++++|+|+||||++++.++.++|++|+++++++|..+........... .....
T Consensus 94 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~--~~~~~ 171 (304)
T 1sfr_A 94 QTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIG--LAMGD 171 (304)
T ss_dssp ECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHH--HHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchhhhhh--Hhhhh
Confidence 01223332 244455555334677899999999999999999999999999999999987543210000000 00000
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCchhhccCC---CCcEEEEeeCCCC--------------cCCchHHHHHHHHHHHc
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYARALREK 677 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~G~~D~--------------~v~~~~~~~~~~~l~~~ 677 (715)
.+......+.+.+ ....+...+|...+.++ .+|+++.+|+.|. .++...+++++++|+++
T Consensus 172 ~~~~~~~~~~g~~---~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~ 248 (304)
T 1sfr_A 172 AGGYKASDMWGPK---EDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAG 248 (304)
T ss_dssp TTSCCHHHHHCST---TSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccchHHhcCCc---chhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhC
Confidence 0000000000101 11345566776655544 5899999999998 66788999999999999
Q ss_pred C-CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 678 G-VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 678 g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
| +++++.++++++|.+.. ....+..++.||.++|+
T Consensus 249 G~~~v~~~~~~~g~H~~~~---w~~~l~~~l~~l~~~l~ 284 (304)
T 1sfr_A 249 GGHNGVFDFPDSGTHSWEY---WGAQLNAMKPDLQRALG 284 (304)
T ss_dssp TCCSEEEECCSCCCSSHHH---HHHHHHHTHHHHHHHHT
T ss_pred CCCceEEEecCCCccCHHH---HHHHHHHHHHHHHHhcC
Confidence 9 99999999777997532 23556778889988764
No 121
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.76 E-value=4.7e-18 Score=170.65 Aligned_cols=213 Identities=18% Similarity=0.246 Sum_probs=132.3
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ......++..+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~-----~~~~~~~~~a~dl~~~l~~--l~~~~ 91 (277)
T 1brt_A 24 QPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRG---FGQSSQP-----TTGYDYDTFAADLNTVLET--LDLQD 91 (277)
T ss_dssp SEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CeEEEECCCCCc--HHHHHHHHHHHhhCCCEEEEeCCCC---CCCCCCC-----CCCccHHHHHHHHHHHHHH--hCCCc
Confidence 459999996654 5678888999999999999999999 6655321 1122344444444444443 23478
Q ss_pred EEEEEeChhHHHHHHHHhhCCC-ceeEEEecCCcchhhhhccCCCC---CCcee--------------eeccCCCCCCC-
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMVGTTDI---PDWCY--------------VESYGSKGKDS- 622 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~~~~~---~~~~~--------------~~~~~~~~~~~- 622 (715)
+.|+||||||.+++.+|.++|+ +++++|++++............. ....+ ...+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLD 171 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHH
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhcc
Confidence 9999999999999999999999 99999999874321100000000 00000 00000000000
Q ss_pred --CCCCCChhhHHHHH------------------hcCchhhccCCCCcEEEEeeCCCCcCCchHH-HHHHHHHHHcCCcE
Q 005093 623 --FTESPSVEDLTRFH------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVET 681 (715)
Q Consensus 623 --~~~~~~~~~~~~~~------------------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~-~~~~~~l~~~g~~~ 681 (715)
.......+..+.+. ..+....+.++++|+|+++|++|..+|++.+ ..+.+.+. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~ 247 (277)
T 1brt_A 172 ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP----SA 247 (277)
T ss_dssp HHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCT----TS
T ss_pred ccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCC----CC
Confidence 00000111111100 1122335678899999999999999998877 66666553 47
Q ss_pred EEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 682 KVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 682 ~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
++++++++||....+ ...++.+.|.+|++
T Consensus 248 ~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 248 EYVEVEGAPHGLLWT-HAEEVNTALLAFLA 276 (277)
T ss_dssp EEEEETTCCTTHHHH-THHHHHHHHHHHHH
T ss_pred cEEEeCCCCcchhhh-CHHHHHHHHHHHHh
Confidence 899999999986543 44578888999986
No 122
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.76 E-value=1.3e-17 Score=167.69 Aligned_cols=212 Identities=20% Similarity=0.283 Sum_probs=130.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.. .......+++.+.+..+++. ...+
T Consensus 27 g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~-----~~~~~~~~~~a~dl~~ll~~--l~~~ 94 (281)
T 3fob_A 27 GKPVVLIHGWPLS--GRSWEYQVPALVEAGYRVITYDRRG---FGKSSQ-----PWEGYEYDTFTSDLHQLLEQ--LELQ 94 (281)
T ss_dssp SEEEEEECCTTCC--GGGGTTTHHHHHHTTEEEEEECCTT---STTSCC-----CSSCCSHHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEECCCCCc--HHHHHHHHHHHHhCCCEEEEeCCCC---CCCCCC-----CccccCHHHHHHHHHHHHHH--cCCC
Confidence 4678999997655 5577778889999999999999999 555431 11223455666555555555 2457
Q ss_pred eEEEEEeChhHHHHHHHHhh-CCCceeEEEecCCcchhhhhcc-C-CCCCCce-------------------eeeccCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVG-T-TDIPDWC-------------------YVESYGSK 618 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~~~~~~~~-~-~~~~~~~-------------------~~~~~~~~ 618 (715)
++.|+||||||.+++.+++. +|++++++|++++......... . ....... +...+...
T Consensus 95 ~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (281)
T 3fob_A 95 NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAA 174 (281)
T ss_dssp SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred cEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhccc
Confidence 89999999999877766555 5899999998876432100000 0 0000000 00000000
Q ss_pred CCCCCCCCCChhh-------------------HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHH-HHHHHHHcC
Q 005093 619 GKDSFTESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ-YARALREKG 678 (715)
Q Consensus 619 ~~~~~~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~-~~~~l~~~g 678 (715)
.. ......... ...+...+....+.++++|+|+++|++|.++|++.+.+ +.+.+
T Consensus 175 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~---- 248 (281)
T 3fob_A 175 GD--RTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAI---- 248 (281)
T ss_dssp TT--BCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHS----
T ss_pred cc--ccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhC----
Confidence 00 000000000 01111223344578899999999999999999886633 33333
Q ss_pred CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 679 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 679 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
...++++++++||....+ ...++.+.+.+||+
T Consensus 249 p~~~~~~i~~~gH~~~~e-~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 249 PNSKVALIKGGPHGLNAT-HAKEFNEALLLFLK 280 (281)
T ss_dssp TTCEEEEETTCCTTHHHH-THHHHHHHHHHHHC
T ss_pred CCceEEEeCCCCCchhhh-hHHHHHHHHHHHhh
Confidence 357899999999986543 34578888888885
No 123
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.76 E-value=3.8e-18 Score=174.75 Aligned_cols=225 Identities=14% Similarity=0.158 Sum_probs=142.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..+.....- +.|+||++||++.. ...|...+..|++ ||.|+++|+|| +|.+. .......
T Consensus 56 ~~~~~~~~~~g--------~~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G---~G~S~-----~~~~~~~ 116 (314)
T 3kxp_A 56 GRITLNVREKG--------SGPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRG---HGLSD-----KPETGYE 116 (314)
T ss_dssp SSCEEEEEEEC--------CSSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTT---STTSC-----CCSSCCS
T ss_pred CCEEEEEEecC--------CCCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCC---cCCCC-----CCCCCCC
Confidence 56666544332 26899999997654 4567777888877 69999999999 44442 1122334
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-----c-CCCCCC-ceeee
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-----G-TTDIPD-WCYVE 613 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----~-~~~~~~-~~~~~ 613 (715)
.++..+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+++|........ . ...... +....
T Consensus 117 ~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (314)
T 3kxp_A 117 ANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIK 194 (314)
T ss_dssp HHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHH
T ss_pred HHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHH
Confidence 66666666666655 234789999999999999999999999999999998865321110 0 000000 00000
Q ss_pred ccCCCCCCCCCCCCChhhHHHH---------------------------HhcCchhhccCCCCcEEEEeeCCCCcCCchH
Q 005093 614 SYGSKGKDSFTESPSVEDLTRF---------------------------HSKSPISHISKVKTPTIFLLGAQDLRVPVSN 666 (715)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~ 666 (715)
.........+.. ........+ ...+....+.++++|+|+++|++|..+|++.
T Consensus 195 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~ 273 (314)
T 3kxp_A 195 AVEAYLAGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAA 273 (314)
T ss_dssp HHHHHHHHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHH
T ss_pred HHHHHHHhhccc-CchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHH
Confidence 000000000000 000000000 0114445567889999999999999999988
Q ss_pred HHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 667 GLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 667 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+..+.+.+. .+++++++++||.+.... ...+.+.|.+||++
T Consensus 274 ~~~~~~~~~----~~~~~~~~g~gH~~~~e~-~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 274 LAKTSRLRP----DLPVVVVPGADHYVNEVS-PEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHHHCT----TSCEEEETTCCSCHHHHC-HHHHHHHHHHHHHC
T ss_pred HHHHHHhCC----CceEEEcCCCCCcchhhC-HHHHHHHHHHHHhC
Confidence 887776663 367899999999875433 45788889999863
No 124
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.76 E-value=1.3e-18 Score=192.21 Aligned_cols=244 Identities=14% Similarity=0.095 Sum_probs=162.5
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHH-HHHHhCCcEEEEEcCCCCCCCchhhhhcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLP 533 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~-~~~~~~~-~~la~~G~~vi~~d~rG~~~~g~~~~~~~~ 533 (715)
.+...||.+|.+.+|.|+ ..++.|+||++||.+..... ..|...+ +.|+++||+|+++|+||+++++..+.
T Consensus 13 ~i~~~DG~~L~~~~~~P~---~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~---- 85 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFV---- 85 (587)
T ss_dssp EEECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCC----
T ss_pred EEECCCCCEEEEEEEECC---CCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccc----
Confidence 345568899999999997 34678999999984433210 0122233 88999999999999999776654432
Q ss_pred CCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc-chhhhhccC-CCCC----
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMVGT-TDIP---- 607 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~-~~~~~~~~~-~~~~---- 607 (715)
. .....+|+.++++||.++...+ .+|+++|+||||++++.+++.+|+.++++|+.++. .++...... ....
T Consensus 86 -~-~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG~~~~~~ 162 (587)
T 3i2k_A 86 -P-HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEA 162 (587)
T ss_dssp -T-TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHH
T ss_pred -c-ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCCccccch
Confidence 1 2346899999999999887555 89999999999999999999989999999999998 664321100 0000
Q ss_pred --Cceeee------------------------------cc-CCCCC-------------CCC-CCCCChhhHHHHHhcCc
Q 005093 608 --DWCYVE------------------------------SY-GSKGK-------------DSF-TESPSVEDLTRFHSKSP 640 (715)
Q Consensus 608 --~~~~~~------------------------------~~-~~~~~-------------~~~-~~~~~~~~~~~~~~~sp 640 (715)
.|.... .+ ..... ..+ ...+ .....|...++
T Consensus 163 ~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~yw~~~s~ 240 (587)
T 3i2k_A 163 LLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP--DNDESWQSISL 240 (587)
T ss_dssp HHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCC--SCCHHHHTTCC
T ss_pred HHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCC--CCChHHhcCCh
Confidence 011000 00 00000 000 1111 11234566777
Q ss_pred hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCC---------CCCchH---HHHHHHHH
Q 005093 641 ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE---------RPQSDF---ESFLNIGL 708 (715)
Q Consensus 641 ~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---------~~~~~~---~~~~~i~~ 708 (715)
...+.+|++|+|+++|..|..+ ..+.+++++++..+. .++++-|. .|... .+.... +..+.+++
T Consensus 241 ~~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 316 (587)
T 3i2k_A 241 FERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGIAATYPIQEATTMHKA 316 (587)
T ss_dssp HHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCGGGSCCHHHHHHHHHH
T ss_pred hhhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCCccccccchhhHHHHH
Confidence 7789999999999999999875 557788899877655 36666665 35421 111111 33488999
Q ss_pred HHHHhcC
Q 005093 709 WFKKYCK 715 (715)
Q Consensus 709 wl~~~l~ 715 (715)
||++|||
T Consensus 317 wFD~~Lk 323 (587)
T 3i2k_A 317 FFDRHLR 323 (587)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999996
No 125
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=7.6e-18 Score=191.50 Aligned_cols=272 Identities=14% Similarity=0.108 Sum_probs=175.7
Q ss_pred ccceEEeeCCCCceEEEEecC--CCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeec--CCCCe-EEEEeec
Q 005093 43 TGASAVVPSPSGSKLLVVRNP--ENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN--SDETL-IAYVAEE 117 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wS--pDg~~-la~~~~~ 117 (715)
..+..|++|+| +++|+..+ +++...+|.+..+++.++++.....+...+...+. ..+.|| |||++ |+|....
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSG-FPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCC-CCEEEECCSSSSCEEEEEBTT
T ss_pred CccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCC-ccceeeeecCCCeEEEEEECC
Confidence 56888999965 78888763 33444566554566666655433222111111110 145566 99999 9986432
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc--C-CceEeecCCC---CCCccceEEE
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--S-GEVQAVKGIP---KSLSVGQVVW 191 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~-g~~~~l~~~~---~~~~~~~~~~ 191 (715)
..+||+++++ + ++.++++... .......++|
T Consensus 101 -------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 101 -------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp -------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE
T ss_pred -------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE
Confidence 2569999998 6 8888884211 3345678999
Q ss_pred ecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC------CCceecC-CCCcccc
Q 005093 192 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED------LPVVNLT-ESISSAF 264 (715)
Q Consensus 192 spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~lt-~~~~~~~ 264 (715)
||||+. |+|.+....... ......+||++|+ .+ ++.+.++ .......
T Consensus 138 spDg~~----l~~~~~~~~~~~-----~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~~~ 191 (662)
T 3azo_A 138 LPERGE----VWCMAEEFTGEG-----PSDVRRFLAAVPL-----------------DGSAAADRSAVRELSDDAHRFVT 191 (662)
T ss_dssp ETTTTE----EEEEEEEECSSS-----TTCEEEEEEEEET-----------------TSTTTTCGGGSEESSCSCSSEEC
T ss_pred CCCCCE----EEEEEecccCCC-----CCCceeEEEEEEC-----------------CCCccccCCceeEEEecCCCccc
Confidence 999999 999874311000 0012247999997 66 7788888 7667788
Q ss_pred ceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC-CC---CCCCcccceeeeeeceecCCCCCccccccCCCCCCcc
Q 005093 265 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TN---GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~-~~---~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 340 (715)
.|+|||||++|+|.+..... ......+||++|+. ++ ..+.++... ......+.|
T Consensus 192 ~~~~SpDG~~la~~~~~~~~---~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-------------------~~~~~~~~~ 249 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHPR---MPWEGTELKTARVTEDGRFADTRTLLGGP-------------------EEAIAQAEW 249 (662)
T ss_dssp CCEECTTSSEEEEEEECTTC---CTTTCEEEEEEEECTTSCEEEEEEEEEET-------------------TBCEEEEEE
T ss_pred CceECCCCCEEEEEECCCCC---CCCCCcEEEEEEECCCCcccccEEeCCCC-------------------CceEcceEE
Confidence 89999999999999866421 11234679999998 44 222332110 012345679
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCc---------eeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 341 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF---------SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 341 ~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~---------~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
+|||+ +++++...+...||.+|+++++.++++...... ....++++ +.++++... .-..|+.+++.+
T Consensus 250 spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~--~~~~l~~~d~~~ 325 (662)
T 3azo_A 250 APDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLAN-GLIAVVHGK--GAAVLGILDPES 325 (662)
T ss_dssp CTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTT-SCEEEEEBS--SSCEEEEEETTT
T ss_pred CCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCC-CEEEEEEEc--CccEEEEEECCC
Confidence 99999 888887777779999999999999888754322 12334444 456666655 556788888754
Q ss_pred c
Q 005093 412 K 412 (715)
Q Consensus 412 ~ 412 (715)
+
T Consensus 326 ~ 326 (662)
T 3azo_A 326 G 326 (662)
T ss_dssp T
T ss_pred C
Confidence 4
No 126
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.76 E-value=9.6e-18 Score=170.35 Aligned_cols=231 Identities=13% Similarity=0.136 Sum_probs=139.2
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
.+|.+++...+-| ...|.||++||.+.. ...|.. .+..|+++||.|+++|+|| +|.+.... + ....
T Consensus 8 ~~g~~l~y~~~G~------~~~~~vvllHG~~~~--~~~w~~~~~~~L~~~G~~vi~~D~rG---~G~S~~~~-~-~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGD------PADPALLLVMGGNLS--ALGWPDEFARRLADGGLHVIRYDHRD---TGRSTTRD-F-AAHP 74 (298)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCC--GGGSCHHHHHHHHTTTCEEEEECCTT---STTSCCCC-T-TTSC
T ss_pred cCCeEEEEEeccC------CCCCeEEEEcCCCCC--ccchHHHHHHHHHhCCCEEEeeCCCC---CCCCCCCC-C-CcCC
Confidence 3677776554432 234689999996654 456766 4488999999999999999 55543200 0 1112
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc-hhhhh-----------c-cCCC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NLALM-----------V-GTTD 605 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~-~~~~~-----------~-~~~~ 605 (715)
..++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|++++.. ..... . ....
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 152 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccc
Confidence 3455555555555554 245789999999999999999999999999999988754 21000 0 0000
Q ss_pred CCCceeeecc-C----CCCC----C-------CC--CCC-CChhhHH-----HHH-----------------hcCchhh-
Q 005093 606 IPDWCYVESY-G----SKGK----D-------SF--TES-PSVEDLT-----RFH-----------------SKSPISH- 643 (715)
Q Consensus 606 ~~~~~~~~~~-~----~~~~----~-------~~--~~~-~~~~~~~-----~~~-----------------~~sp~~~- 643 (715)
.........+ . .... . .+ ... ....... .+. ..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T 1q0r_A 153 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 232 (298)
T ss_dssp CCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred cccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccc
Confidence 0000000000 0 0000 0 00 000 0000000 000 0011224
Q ss_pred ccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 644 ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 644 ~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+.++++|+|+++|++|..+|++.+..+.+.+. ..++++++++|| .. ..++.+.+.+|+++++
T Consensus 233 l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gH--e~---p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 233 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIPGMGH--AL---PSSVHGPLAEVILAHT 294 (298)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTST----TEEEEEETTCCS--SC---CGGGHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEeCCCccCCHHHHHHHHHhCC----CCEEEEcCCCCC--CC---cHHHHHHHHHHHHHHh
Confidence 67889999999999999999888777665543 478999999999 22 2467888999998764
No 127
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.76 E-value=2.2e-17 Score=164.56 Aligned_cols=227 Identities=15% Similarity=0.233 Sum_probs=141.0
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|.+++....-+ +..|+||++||.+.. ...|...+..|++ +|.|+++|+|| ||.+... ..
T Consensus 10 ~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~--~~~w~~~~~~L~~-~~~vi~~D~rG---~G~S~~~-----~~ 72 (266)
T 3om8_A 10 ATSDGASLAYRLDGA------AEKPLLALSNSIGTT--LHMWDAQLPALTR-HFRVLRYDARG---HGASSVP-----PG 72 (266)
T ss_dssp ECTTSCEEEEEEESC------TTSCEEEEECCTTCC--GGGGGGGHHHHHT-TCEEEEECCTT---STTSCCC-----CS
T ss_pred eccCCcEEEEEecCC------CCCCEEEEeCCCccC--HHHHHHHHHHhhc-CcEEEEEcCCC---CCCCCCC-----CC
Confidence 345788887555432 246889999996544 5578888888865 79999999999 6655321 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh----------hccCCCCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----------MVGTTDIP 607 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~----------~~~~~~~~ 607 (715)
...++++.+.+..+++.- ..+++.|+||||||.+++.+|.++|++++++|++++...... ........
T Consensus 73 ~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 3om8_A 73 PYTLARLGEDVLELLDAL--EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMS 150 (266)
T ss_dssp CCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSH
T ss_pred CCCHHHHHHHHHHHHHHh--CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHH
Confidence 234555555555555542 346899999999999999999999999999999876432100 00000000
Q ss_pred Cce--eeeccCCCCCCCCCCCCC-hhhH----------------HHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHH
Q 005093 608 DWC--YVESYGSKGKDSFTESPS-VEDL----------------TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 668 (715)
Q Consensus 608 ~~~--~~~~~~~~~~~~~~~~~~-~~~~----------------~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~ 668 (715)
... ....+.... .....+. .+.. ..+...+....+.++++|+|+++|++|.++|++.+.
T Consensus 151 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~ 228 (266)
T 3om8_A 151 ETAAGFLGNWFPPA--LLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGE 228 (266)
T ss_dssp HHHHHHHHHHSCHH--HHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHHHHhcChh--hhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHH
Confidence 000 000000000 0000000 0000 001112223456789999999999999999998888
Q ss_pred HHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 669 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 669 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.+.+.+. ..++++++ +||.... +...++.+.+.+|++
T Consensus 229 ~l~~~ip----~a~~~~i~-~gH~~~~-e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 229 LIAASIA----GARLVTLP-AVHLSNV-EFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHST----TCEEEEES-CCSCHHH-HCHHHHHHHHHHHHT
T ss_pred HHHHhCC----CCEEEEeC-CCCCccc-cCHHHHHHHHHHHhc
Confidence 7777664 36888897 7997653 344577888888885
No 128
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.76 E-value=7.2e-18 Score=177.65 Aligned_cols=140 Identities=10% Similarity=0.024 Sum_probs=102.7
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC------------ccch----HHHHHHHhCCcEEEEEcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL------------SSYS----KSLAFLSSVGYSLLIVNYR 519 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~------------~~~~----~~~~~la~~G~~vi~~d~r 519 (715)
.+...+|.++.++++.|++. .++.|+||++||.+..... ..|. ..++.|+++||+|+++|+|
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCT
T ss_pred EEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCC
Confidence 55667889999999999742 5689999999996543210 0112 5678899999999999999
Q ss_pred CCCCCchhhhhcC----------------CCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC
Q 005093 520 GSLGFGEEALQSL----------------PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 583 (715)
Q Consensus 520 G~~~~g~~~~~~~----------------~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 583 (715)
|.++.+....... ...+....+.|+.+++++|.+++.+|.+||+|+||||||++++.+++. ++
T Consensus 169 g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~ 247 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DK 247 (391)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CC
Confidence 9554332210000 000111123788999999999988999999999999999999988886 56
Q ss_pred ceeEEEecCCcchhh
Q 005093 584 KFVAAAARNPLCNLA 598 (715)
Q Consensus 584 ~~~~~v~~~~~~~~~ 598 (715)
+++++|+.++++.+.
T Consensus 248 ~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 248 DIYAFVYNDFLCQTQ 262 (391)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred ceeEEEEccCCCCcc
Confidence 899999888877664
No 129
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.75 E-value=4.6e-18 Score=170.57 Aligned_cols=232 Identities=14% Similarity=0.117 Sum_probs=144.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
.|.++..+ |.|.+ .|+||++||++.......|.. ..+.+++.|+.|+++|++++..+.. +.. . ...
T Consensus 21 ~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~-~~~--~-~~~ 89 (280)
T 1r88_A 21 MGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTN-WEQ--D-GSK 89 (280)
T ss_dssp TTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSB-CSS--C-TTC
T ss_pred cCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCC-CCC--C-CCC
Confidence 56778877 77863 289999999753222334443 4566788999999999976543311 100 0 001
Q ss_pred ccchhh-H-HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeecc
Q 005093 538 SQDVND-V-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 615 (715)
Q Consensus 538 ~~~~~d-~-~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (715)
...+ + .+++.++.++..+++++++|+|+||||++++.++.++|++|+++++++|..++............ ....
T Consensus 90 --~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~--~~~~ 165 (280)
T 1r88_A 90 --QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAG--MQQF 165 (280)
T ss_dssp --BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHH--HHHH
T ss_pred --cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHH--hhhc
Confidence 1222 1 23444555544477789999999999999999999999999999999998764321000000000 0000
Q ss_pred CCCCCCCCCCCCChhhHHHHHhcCchhhccCC---CCcEEEEe----eCCCCc-------CCchHHHHHHHHHHHcC-Cc
Q 005093 616 GSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLL----GAQDLR-------VPVSNGLQYARALREKG-VE 680 (715)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~----G~~D~~-------v~~~~~~~~~~~l~~~g-~~ 680 (715)
+......+.+.+ ....+...+|...+.++ .+|+++.+ |+.|.. ++..++++++++|++.| ++
T Consensus 166 ~~~~~~~~~g~~---~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~ 242 (280)
T 1r88_A 166 GGVDTNGMWGAP---QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHN 242 (280)
T ss_dssp HCCCTHHHHCCG---GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cccchhhhcCCC---chhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 000000000000 11234456666555544 57999999 999984 57889999999999999 99
Q ss_pred EEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 681 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 681 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++.++++++|.+... ...+...+.|+.+-
T Consensus 243 ~~~~~~~~g~H~~~~w---~~~l~~~l~~~~~~ 272 (280)
T 1r88_A 243 GHFDFPASGDNGWGSW---APQLGAMSGDIVGA 272 (280)
T ss_dssp EEEECCSSCCSSHHHH---HHHHHHHHHHHHHH
T ss_pred eEEEecCCCCcChhHH---HHHHHHHHHHHHHH
Confidence 9999988889976422 23455566666543
No 130
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.75 E-value=2e-17 Score=177.98 Aligned_cols=232 Identities=16% Similarity=0.207 Sum_probs=142.6
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCC
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
+.+.+|..++.... +..|+||++||++.. ...|...+..|+++||.|+++|+|| +|.+.. ..
T Consensus 8 ~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~--~~~~~~l~~~La~~Gy~Vi~~D~rG---~G~S~~-----~~ 69 (456)
T 3vdx_A 8 QENSTSIDLYYEDH--------GTGVPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRG---FGQSSQ-----PT 69 (456)
T ss_dssp EETTEEEEEEEEEE--------SSSEEEEEECCTTCC--GGGGTTHHHHHHHHTEEEEEECCTT---STTSCC-----CS
T ss_pred ccccCCeEEEEEEe--------CCCCEEEEECCCCCc--HHHHHHHHHHHHHCCcEEEEECCCC---CCCCCC-----CC
Confidence 34556777763221 145899999997655 4567788899999999999999999 554431 11
Q ss_pred CccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhccCCCCCC-------
Q 005093 537 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTTDIPD------- 608 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~~~~~~~------- 608 (715)
....+++..+.+..+++. ++.++++|+|||+||.+++.+++.+ |++++++|+++|...............
T Consensus 70 ~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 147 (456)
T 3vdx_A 70 TGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFD 147 (456)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHH
Confidence 122344444444444443 2457899999999999888888876 899999999998764211100000000
Q ss_pred ----------cee----eeccCCCCCCCCCCCCChhhHHHHH------------------hcCchhhccCCCCcEEEEee
Q 005093 609 ----------WCY----VESYGSKGKDSFTESPSVEDLTRFH------------------SKSPISHISKVKTPTIFLLG 656 (715)
Q Consensus 609 ----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~sp~~~~~~i~~P~Lii~G 656 (715)
..+ ...+... ...............+. ..+....+.++++|+|+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G 226 (456)
T 3vdx_A 148 GIVAAVKADRYAFYTGFFNDFYNL-DENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHG 226 (456)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTT-TTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEE
T ss_pred HHHHhhhccchHHHHHHHHHHhcc-cccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEe
Confidence 000 0000000 00000000001111000 11233456788999999999
Q ss_pred CCCCcCCch-HHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 657 AQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 657 ~~D~~v~~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
++|..+|++ ....+.+. ...+++++++++||.+.. +....+.+.+.+||++++
T Consensus 227 ~~D~~vp~~~~~~~l~~~----~~~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 227 TGDRTLPIENTARVFHKA----LPSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKAL 280 (456)
T ss_dssp TTCSSSCGGGTHHHHHHH----CTTSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHH----CCCceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHhh
Confidence 999999988 44434333 245789999999998665 456688999999998865
No 131
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.75 E-value=4.1e-18 Score=169.98 Aligned_cols=217 Identities=14% Similarity=0.140 Sum_probs=133.5
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+.|.||++||.+.. ...|...+..|++ +||.|+++|+|| +|.+..... ...+++.+.+..+++.. .+
T Consensus 20 ~~~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G---~G~s~~~~~------~~~~~~~~~~~~~l~~~-~~ 87 (272)
T 3fsg_A 20 SGTPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPG---MGNSDPISP------STSDNVLETLIEAIEEI-IG 87 (272)
T ss_dssp CSSEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTT---STTCCCCSS------CSHHHHHHHHHHHHHHH-HT
T ss_pred CCCeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCC---CCCCCCCCC------CCHHHHHHHHHHHHHHH-hC
Confidence 45789999996644 4467677777776 799999999999 554432111 33444444443333321 23
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCC----CCC---CCCChhh
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD----SFT---ESPSVED 631 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~ 631 (715)
.+++.|+|||+||.+++.++.++|++++++|+++|.....................+...... .+. .......
T Consensus 88 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (272)
T 3fsg_A 88 ARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQA 167 (272)
T ss_dssp TCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHH
T ss_pred CCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCch
Confidence 478999999999999999999999999999999987532221111110000000000000000 000 0000000
Q ss_pred HHHHH-------------------h-----cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC
Q 005093 632 LTRFH-------------------S-----KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 687 (715)
Q Consensus 632 ~~~~~-------------------~-----~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 687 (715)
...+. . ..+...+.++++|+|+++|++|..+|++.+..+.+.+ ..+++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~ 243 (272)
T 3fsg_A 168 WHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN----ENGEIVLLN 243 (272)
T ss_dssp HHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTC----TTEEEEEES
T ss_pred hHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhc----CCCeEEEec
Confidence 00000 0 0011134678999999999999999998887766555 348899999
Q ss_pred CCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 688 NDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 688 ~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
++||.+... ...++.+.+.+||++.
T Consensus 244 ~~gH~~~~~-~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 244 RTGHNLMID-QREAVGFHFDLFLDEL 268 (272)
T ss_dssp SCCSSHHHH-THHHHHHHHHHHHHHH
T ss_pred CCCCCchhc-CHHHHHHHHHHHHHHh
Confidence 999987643 3457888999999875
No 132
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.75 E-value=2.3e-18 Score=172.39 Aligned_cols=217 Identities=15% Similarity=0.121 Sum_probs=141.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHH-HHhCC---cEEEEEcCCCCCCCchh--hhhcCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF-LSSVG---YSLLIVNYRGSLGFGEE--ALQSLPG 534 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~-la~~G---~~vi~~d~rG~~~~g~~--~~~~~~~ 534 (715)
.|.++..++|+|+++++.+++|+|+++||++.......+...... .++.| ++|+++|+++...++.. .....+.
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~ 107 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPS 107 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCC
Confidence 578899999999988777899999999996531111112112222 24567 99999999975433211 0000110
Q ss_pred ----------------CCC-ccchhhHH--HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 535 ----------------KVG-SQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 535 ----------------~~~-~~~~~d~~--~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
..+ .....+.. +.+.++.++..+|+++++|+||||||++++.++.++|++|+++++.+|.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 108 VISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 011 01222222 33455556555788999999999999999999999999999999999976
Q ss_pred hhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHH-
Q 005093 596 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL- 674 (715)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l- 674 (715)
.+.... +. ...+.+.... ......+|++++||+.|..++..++++++++|
T Consensus 188 ~~~~~~-------------~~-------------~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~ 238 (275)
T 2qm0_A 188 WWNNKS-------------VL-------------EKEENLIIEL---NNAKFETGVFLTVGSLEREHMVVGANELSERLL 238 (275)
T ss_dssp THHHHG-------------GG-------------GGTTHHHHHH---HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred eeChHH-------------HH-------------HHHHHHHhhh---cccCCCceEEEEeCCcccchhhHHHHHHHHHHH
Confidence 432110 00 0000111000 02345679999999999988889999999999
Q ss_pred --HHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 675 --REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 675 --~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
++.|.++++.++++++|+.. ....+...+.||
T Consensus 239 ~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 239 QVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred hcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 55688999999999999643 233455566665
No 133
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.75 E-value=7.5e-18 Score=170.02 Aligned_cols=230 Identities=13% Similarity=0.111 Sum_probs=142.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
.+|..++...+-|+ ..|.||++||.+.. .. .|...+..| ++||.|+++|+|| +|.+... +.....
T Consensus 10 ~~g~~l~~~~~G~~------~~~~vvllHG~~~~--~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~--~~~~~~ 75 (286)
T 2yys_A 10 VGEAELYVEDVGPV------EGPALFVLHGGPGG--NAYVLREGLQDY-LEGFRVVYFDQRG---SGRSLEL--PQDPRL 75 (286)
T ss_dssp CSSCEEEEEEESCT------TSCEEEEECCTTTC--CSHHHHHHHGGG-CTTSEEEEECCTT---STTSCCC--CSCGGG
T ss_pred ECCEEEEEEeecCC------CCCEEEEECCCCCc--chhHHHHHHHHh-cCCCEEEEECCCC---CCCCCCC--ccCccc
Confidence 36777775555332 35789999997655 45 677777777 5689999999999 6655310 111012
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh----hc-cC--CCCCC-ce
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MV-GT--TDIPD-WC 610 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~----~~-~~--~~~~~-~~ 610 (715)
..+++..+.+..+++.- ..+++.|+||||||.+++.+|.++|+ ++++|++++...... .. .. ..... ..
T Consensus 76 ~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T 2yys_A 76 FTVDALVEDTLLLAEAL--GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEE 152 (286)
T ss_dssp CCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHH
T ss_pred CcHHHHHHHHHHHHHHh--CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHH
Confidence 34556665555555542 34789999999999999999999999 999999998653211 00 00 00000 00
Q ss_pred -e------------eec--cCCC-------CC-CCCCCCCChhhHHH-----HHhcCchhhccCCCCcEEEEeeCCCCcC
Q 005093 611 -Y------------VES--YGSK-------GK-DSFTESPSVEDLTR-----FHSKSPISHISKVKTPTIFLLGAQDLRV 662 (715)
Q Consensus 611 -~------------~~~--~~~~-------~~-~~~~~~~~~~~~~~-----~~~~sp~~~~~~i~~P~Lii~G~~D~~v 662 (715)
. ... +... .. ..+........... ....+....+.++++|+|+++|++|..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 232 (286)
T 2yys_A 153 NLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTS 232 (286)
T ss_dssp HHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTT
T ss_pred HHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcC
Confidence 0 000 0000 00 00000000000000 0111233456788999999999999999
Q ss_pred CchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 663 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 663 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++ +..+.+ +.. .++++++++||....+. ..++.+.|.+|+++.
T Consensus 233 ~~~-~~~~~~-~~~----~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 233 YPY-AEEVAS-RLR----APIRVLPEAGHYLWIDA-PEAFEEAFKEALAAL 276 (286)
T ss_dssp TTT-HHHHHH-HHT----CCEEEETTCCSSHHHHC-HHHHHHHHHHHHHTT
T ss_pred CHh-HHHHHh-CCC----CCEEEeCCCCCCcChhh-HHHHHHHHHHHHHhh
Confidence 998 888877 653 57889999999866444 457889999999763
No 134
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.75 E-value=9.9e-18 Score=166.88 Aligned_cols=221 Identities=12% Similarity=0.044 Sum_probs=136.9
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|+||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+...... ......++++.+.+..+++. .+.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G---~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVC---AGSVNPDFFD-FRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTT---STTSCGGGCC-TTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCC---CCCCCCCCCC-ccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999996654 4567777778877 99999999999 5544221111 11122455666666555555 245
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCce----eeeccCCC-------CCCCCCCCCC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC----YVESYGSK-------GKDSFTESPS 628 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~~~~~ 628 (715)
++++|+|||+||.+++.++.++|++++++|+++|................. ........ ..........
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADV 169 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCC
Confidence 689999999999999999999999999999999864321110000000000 00000000 0000000000
Q ss_pred hhh-------------------HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCC
Q 005093 629 VED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 689 (715)
Q Consensus 629 ~~~-------------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~ 689 (715)
... ...+...+....+.++++|+|+++|++|..+|.+.+..+.+.+.. .+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 246 (269)
T 4dnp_A 170 PAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGG---KNTVHWLNIE 246 (269)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSS---CEEEEEEEEE
T ss_pred hhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCC---CceEEEeCCC
Confidence 000 011112234456778899999999999999999888777766532 2789999999
Q ss_pred CccCCCCCchHHHHHHHHHHHHHh
Q 005093 690 VHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 690 ~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
||..... ...++.+.|.+||+++
T Consensus 247 gH~~~~~-~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 247 GHLPHLS-APTLLAQELRRALSHR 269 (269)
T ss_dssp SSCHHHH-CHHHHHHHHHHHHC--
T ss_pred CCCcccc-CHHHHHHHHHHHHhhC
Confidence 9986543 3457888899998753
No 135
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.75 E-value=3.6e-17 Score=159.66 Aligned_cols=203 Identities=12% Similarity=0.102 Sum_probs=133.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHh--CCcEEEEEcCCCCCC------CchhhhhcCCCCC
Q 005093 465 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSLG------FGEEALQSLPGKV 536 (715)
Q Consensus 465 l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~--~G~~vi~~d~rG~~~------~g~~~~~~~~~~~ 536 (715)
+...++.|+ .+..++||++||.+.. ...+...+..+.. .++.+++|+-+.... .+..|........
T Consensus 25 l~y~ii~P~----~~~~~~VI~LHG~G~~--~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~ 98 (246)
T 4f21_A 25 MNYELMEPA----KQARFCVIWLHGLGAD--GHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDA 98 (246)
T ss_dssp CCEEEECCS----SCCCEEEEEEEC--CC--CCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC--
T ss_pred cCceEeCCC----CcCCeEEEEEcCCCCC--HHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccc
Confidence 445577785 3346789999995544 3344444444432 468888887432110 0112211110000
Q ss_pred -------CccchhhHHHHHHHHHH---cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCC
Q 005093 537 -------GSQDVNDVLTAIDHVID---MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI 606 (715)
Q Consensus 537 -------~~~~~~d~~~~i~~l~~---~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~ 606 (715)
....+....+.+..+++ ...++.+||+++|+|+||.+++.++.++|+.+++++++++.........
T Consensus 99 ~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~---- 174 (246)
T 4f21_A 99 NSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFK---- 174 (246)
T ss_dssp -CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHS----
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccccc----
Confidence 01112333333333332 2348999999999999999999999999999999999988542211000
Q ss_pred CCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe
Q 005093 607 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 686 (715)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 686 (715)
.... ....++|+|++||+.|++||++.++++++.|++.|.++++..|
T Consensus 175 -----------------------------~~~~----~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y 221 (246)
T 4f21_A 175 -----------------------------GKIT----SINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY 221 (246)
T ss_dssp -----------------------------TTCC----GGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred -----------------------------cccc----ccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 0000 0113579999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 687 PNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 687 ~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
++.||.+. .+.++.+.+||++.|+
T Consensus 222 ~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 222 VGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp SSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred CCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 99999875 3567889999999885
No 136
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=158.00 Aligned_cols=181 Identities=14% Similarity=0.052 Sum_probs=124.1
Q ss_pred CCcEEEEEcCCCCCCC-CccchH-HHHHHHhC-CcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 480 CDPLIVVLHGGPHSVS-LSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~-~~~~~~-~~~~la~~-G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
+.|.||++||++.... ...|.. ....|+++ ||.|+++|+||... .+....++.+.+...
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 5689999999766532 234554 67788887 99999999998311 133445555555432
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHH
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 636 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (715)
. .++++|+|||+||.+++.++.++| ++++|+++|........ .... ..+...+.
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~----------~~~~-----~~~~~~~~-------- 118 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE----------NERA-----SGYFTRPW-------- 118 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH----------HHHH-----TSTTSSCC--------
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh----------hhHH-----Hhhhcccc--------
Confidence 2 378999999999999999999988 99999999865321000 0000 00000010
Q ss_pred hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 637 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 637 ~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
....+..+.+|+|+++|++|..+|++.+..+.+.+ . .++++++++||.+.... .+.+.++++||++..
T Consensus 119 ---~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~--p~~~~~~~~fl~~~~ 186 (194)
T 2qs9_A 119 ---QWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E----TKLHKFTDCGHFQNTEF--HELITVVKSLLKVPA 186 (194)
T ss_dssp ---CHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T----CEEEEESSCTTSCSSCC--HHHHHHHHHHHTCCC
T ss_pred ---cHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C----CeEEEeCCCCCccchhC--HHHHHHHHHHHHhhh
Confidence 11223345679999999999999999998888877 3 58899999999876433 356677889998653
No 137
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.75 E-value=4.2e-18 Score=169.88 Aligned_cols=228 Identities=15% Similarity=0.205 Sum_probs=141.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++...+-|. ..+.|.||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+.... ....
T Consensus 10 ~g~~l~y~~~g~~----~~~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G---~G~S~~~~-----~~~~ 74 (266)
T 2xua_A 10 NGTELHYRIDGER----HGNAPWIVLSNSLGTD--LSMWAPQVAALSK-HFRVLRYDTRG---HGHSEAPK-----GPYT 74 (266)
T ss_dssp SSSEEEEEEESCS----SSCCCEEEEECCTTCC--GGGGGGGHHHHHT-TSEEEEECCTT---STTSCCCS-----SCCC
T ss_pred CCEEEEEEEcCCc----cCCCCeEEEecCccCC--HHHHHHHHHHHhc-CeEEEEecCCC---CCCCCCCC-----CCCC
Confidence 6777876655332 1126889999995544 4567778888865 59999999999 66553211 1234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh---hcc------CCCCCCc--
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL---MVG------TTDIPDW-- 609 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~---~~~------~~~~~~~-- 609 (715)
+++..+.+..+++. ...+++.|+||||||.+++.+|.++|++++++|++++...... ... .......
T Consensus 75 ~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (266)
T 2xua_A 75 IEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALAD 152 (266)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHH
Confidence 55555555555554 2346899999999999999999999999999999987542100 000 0000000
Q ss_pred eeeeccCCCC-C-------C----CCCCCCChhh----HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 610 CYVESYGSKG-K-------D----SFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 610 ~~~~~~~~~~-~-------~----~~~~~~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
.....+.... . . .+... .... ...+...+....+.++++|+|+++|++|..+|++.+..+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~ 231 (266)
T 2xua_A 153 AVLPRWFTADYMEREPVVLAMIRDVFVHT-DKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231 (266)
T ss_dssp HHHHHHSCHHHHHHCHHHHHHHHHHHHTS-CHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHHHcCcccccCCHHHHHHHHHHHhhC-CHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHh
Confidence 0000000000 0 0 00000 0000 011112233445678899999999999999998887777666
Q ss_pred HHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 674 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+. ..++++++ +||....+. ..++.+.+.+||++
T Consensus 232 ~~----~~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 232 IA----GARYVELD-ASHISNIER-ADAFTKTVVDFLTE 264 (266)
T ss_dssp ST----TCEEEEES-CCSSHHHHT-HHHHHHHHHHHHTC
T ss_pred CC----CCEEEEec-CCCCchhcC-HHHHHHHHHHHHHh
Confidence 53 36899999 999866443 45788889999864
No 138
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.74 E-value=5.9e-17 Score=160.27 Aligned_cols=214 Identities=15% Similarity=0.200 Sum_probs=129.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccch-hhHHHHHHHHHHcCCCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV-NDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~-~d~~~~i~~l~~~~~~d~ 559 (715)
.|.||++||.+.. ....|...+..|+++||.|+++|+|| +|.+... ...+..... .++.++++++.+. +.
T Consensus 23 ~~~vvllHG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~--~~~~~~~~~~~~~~~~~~~l~~l---~~ 93 (254)
T 2ocg_A 23 DHAVLLLPGMLGS-GETDFGPQLKNLNKKLFTVVAWDPRG---YGHSRPP--DRDFPADFFERDAKDAVDLMKAL---KF 93 (254)
T ss_dssp SEEEEEECCTTCC-HHHHCHHHHHHSCTTTEEEEEECCTT---STTCCSS--CCCCCTTHHHHHHHHHHHHHHHT---TC
T ss_pred CCeEEEECCCCCC-CccchHHHHHHHhhCCCeEEEECCCC---CCCCCCC--CCCCChHHHHHHHHHHHHHHHHh---CC
Confidence 3679999995433 13357778888999999999999999 5554321 111111112 3344445555443 34
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh-----hccCCCCCCceeeeccCCCCCCCCCCCCC---hhh
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTTDIPDWCYVESYGSKGKDSFTESPS---VED 631 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 631 (715)
+++.|+||||||.+++.+|.++|++++++|++++...... .........|. ..........+..... +..
T Consensus 94 ~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 171 (254)
T 2ocg_A 94 KKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWS--ERTRKPLEALYGYDYFARTCEK 171 (254)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSC--HHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHH--HHhHHHHHHHhcchhhHHHHHH
Confidence 7899999999999999999999999999999887532110 00000000000 0000000000000000 000
Q ss_pred -HHHHHh-------cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHH
Q 005093 632 -LTRFHS-------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESF 703 (715)
Q Consensus 632 -~~~~~~-------~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 703 (715)
...+.. ......+.++++|+|+++|++|..+|.+.+..+.+.+. ..++++++++||..... ....+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-~p~~~~ 246 (254)
T 2ocg_A 172 WVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK----GSRLHLMPEGKHNLHLR-FADEFN 246 (254)
T ss_dssp HHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST----TCEEEEETTCCTTHHHH-THHHHH
T ss_pred HHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCC----CCEEEEcCCCCCchhhh-CHHHHH
Confidence 000000 01233567899999999999999999888777766553 36899999999987643 345677
Q ss_pred HHHHHHH
Q 005093 704 LNIGLWF 710 (715)
Q Consensus 704 ~~i~~wl 710 (715)
+.+.+||
T Consensus 247 ~~i~~fl 253 (254)
T 2ocg_A 247 KLAEDFL 253 (254)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7888887
No 139
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.74 E-value=1.1e-17 Score=167.77 Aligned_cols=218 Identities=11% Similarity=0.118 Sum_probs=138.2
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
|+||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+..... ........++..+.+..+++.. +.++
T Consensus 29 ~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G---~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~ 99 (282)
T 3qvm_A 29 KTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVG---SGQSDLESF-STKRYSSLEGYAKDVEEILVAL--DLVN 99 (282)
T ss_dssp CEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTT---STTSCGGGC-CTTGGGSHHHHHHHHHHHHHHT--TCCS
T ss_pred CeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCC---CCCCCCCCC-CccccccHHHHHHHHHHHHHHc--CCCc
Confidence 899999996654 4567777888877 99999999999 444432211 0111224566666666666552 4578
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCce------eeeccCC-------CCCC-CCCCCC
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC------YVESYGS-------KGKD-SFTESP 627 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-------~~~~-~~~~~~ 627 (715)
++|+|||+||.+++.++.++|++++++|+++|........... ...+. ....... .... .+....
T Consensus 100 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 100 VSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDY-VGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTE-ECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred eEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhh-hchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 9999999999999999999999999999999865322110000 00000 0000000 0000 000000
Q ss_pred Chhh-------------------HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 628 SVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 628 ~~~~-------------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
.... .......+....+.++++|+|+++|++|..+|.+.+..+.+.+. ..+++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~ 254 (282)
T 3qvm_A 179 SSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP----NSQLELIQA 254 (282)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS----SEEEEEEEE
T ss_pred chhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC----CCcEEEecC
Confidence 0000 01111222335567889999999999999999888877766653 478999999
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 689 DVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+||.+.... ..++.+.|.+||++..
T Consensus 255 ~gH~~~~~~-~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 255 EGHCLHMTD-AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp ESSCHHHHC-HHHHHHHHHHHHHHC-
T ss_pred CCCcccccC-HHHHHHHHHHHHHhcC
Confidence 999865433 5578899999998753
No 140
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.74 E-value=3.8e-17 Score=166.65 Aligned_cols=227 Identities=18% Similarity=0.160 Sum_probs=139.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
++..++.+..- .+..|+||++||++.. ...|...+..|++ ||.|+++|+||.+ |.+.. ......
T Consensus 53 ~~~~~~~~~~g------~~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-g~~vi~~D~~G~g--G~s~~-----~~~~~~ 116 (306)
T 2r11_A 53 RFGQTHVIASG------PEDAPPLVLLHGALFS--STMWYPNIADWSS-KYRTYAVDIIGDK--NKSIP-----ENVSGT 116 (306)
T ss_dssp TTEEEEEEEES------CTTSCEEEEECCTTTC--GGGGTTTHHHHHH-HSEEEEECCTTSS--SSCEE-----CSCCCC
T ss_pred CCceEEEEeeC------CCCCCeEEEECCCCCC--HHHHHHHHHHHhc-CCEEEEecCCCCC--CCCCC-----CCCCCC
Confidence 44566544432 2346889999997654 4457777888877 9999999999942 33221 111234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-------CCCCCCc--ee
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-------TTDIPDW--CY 611 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~~~~~--~~ 611 (715)
.+++.+.+..+++. ++.++++|+|||+||.+++.+|.++|++++++|+++|......... ......+ .+
T Consensus 117 ~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (306)
T 2r11_A 117 RTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETF 194 (306)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHH
Confidence 66666666666665 2457899999999999999999999999999999998765311000 0000000 00
Q ss_pred eeccCCCCCCCCCCCCChhhHHH------------------HHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHH
Q 005093 612 VESYGSKGKDSFTESPSVEDLTR------------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 673 (715)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~ 673 (715)
...+.... ....+....... .........+.++++|+|+++|++|..+|++.+.++++.
T Consensus 195 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 271 (306)
T 2r11_A 195 LNWMMNDQ---NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASS 271 (306)
T ss_dssp HHHHTTTC---CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHH
T ss_pred HHHhhCCc---cccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHH
Confidence 00000000 000000000000 001122334667899999999999999998777655544
Q ss_pred HHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 674 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 674 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+ ...+++++++++||.+.... ..++.+.|.+||++
T Consensus 272 ~---~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 272 F---VPDIEAEVIKNAGHVLSMEQ-PTYVNERVMRFFNA 306 (306)
T ss_dssp H---STTCEEEEETTCCTTHHHHS-HHHHHHHHHHHHC-
T ss_pred H---CCCCEEEEeCCCCCCCcccC-HHHHHHHHHHHHhC
Confidence 3 23578999999999765433 45778888888853
No 141
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.74 E-value=8.8e-18 Score=171.07 Aligned_cols=227 Identities=15% Similarity=0.173 Sum_probs=142.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..+.....- +.|+||++||.+.. ...|...+..|.++||.|+++|+|| +|.+.. ......
T Consensus 17 ~g~~l~~~~~g--------~~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~S~~-----~~~~~~ 78 (309)
T 3u1t_A 17 EGATIAYVDEG--------SGQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIG---MGDSAK-----PDIEYR 78 (309)
T ss_dssp TTEEEEEEEEE--------CSSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCC-----CSSCCC
T ss_pred CCeEEEEEEcC--------CCCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCC---CCCCCC-----CCcccC
Confidence 56667544331 25789999997654 4567778888788999999999999 555432 111334
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc--------------CCCC
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG--------------TTDI 606 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~--------------~~~~ 606 (715)
.+++.+.+..+++. ...++++|+|||+||.+++.+|.++|++++++|+++|......... ....
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
T 3u1t_A 79 LQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT 156 (309)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc
Confidence 66666666666554 2347899999999999999999999999999999887543210000 0000
Q ss_pred C---------CceeeeccCCCCCCCCCCCCChhhHHHHH-----------------hc--------------CchhhccC
Q 005093 607 P---------DWCYVESYGSKGKDSFTESPSVEDLTRFH-----------------SK--------------SPISHISK 646 (715)
Q Consensus 607 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------------sp~~~~~~ 646 (715)
+ ...+...+.... .............+. .. +....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (309)
T 3u1t_A 157 ADVGEKMVLDGNFFVETILPEM--GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA 234 (309)
T ss_dssp TTHHHHHHTTTCHHHHTHHHHT--SCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccccceehhhhcccc--cccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc
Confidence 0 000000000000 000000011111110 00 11123567
Q ss_pred CCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 647 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 647 i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+++|+|+++|++|..+|.+.+..+.+.+. ..++++++++||..... ...++.+.|.+||++..
T Consensus 235 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 235 SPIPKLLFHAEPGALAPKPVVDYLSENVP----NLEVRFVGAGTHFLQED-HPHLIGQGIADWLRRNK 297 (309)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHST----TEEEEEEEEESSCHHHH-CHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHhhCC----CCEEEEecCCcccchhh-CHHHHHHHHHHHHHhcc
Confidence 89999999999999999887777766653 36777889999976543 45578889999998764
No 142
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.74 E-value=1.3e-17 Score=168.16 Aligned_cols=216 Identities=18% Similarity=0.244 Sum_probs=133.7
Q ss_pred CcEEEEEcCCC-CCCCCccchHHH-HHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 481 DPLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 481 ~P~vv~iHGg~-~~~~~~~~~~~~-~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
.|.||++||.+ .......|...+ ..|++. |.|+++|+|| +|.+... .. ....+++..+.+..+++. .+
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~---~~-~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPG---FNKSDAV---VM-DEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTT---STTSCCC---CC-SSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCC---CCCCCCC---CC-cCcCHHHHHHHHHHHHHH--hC
Confidence 46899999964 222244566677 778765 9999999999 6655321 11 123466666666555555 24
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC------------CCCceee----eccCCCCCCC
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYV----ESYGSKGKDS 622 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~~~~~~~ 622 (715)
.+++.|+||||||.+++.+|.++|++++++|+++|............ .+.+... ..+... ...
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYD-QSL 181 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSC-GGG
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcC-Ccc
Confidence 57899999999999999999999999999999987542100000000 0000000 000000 000
Q ss_pred CCCC----------CChhhHHHHH---------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEE
Q 005093 623 FTES----------PSVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 683 (715)
Q Consensus 623 ~~~~----------~~~~~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 683 (715)
.... ........+. ..+....+.++++|+|+++|++|..+|++.+..+.+.+. ..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~----~~~~ 257 (286)
T 2puj_A 182 ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID----DARL 257 (286)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS----SEEE
T ss_pred CCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC----CCeE
Confidence 0000 0000000000 112234567889999999999999999988877766653 4789
Q ss_pred EEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 684 IVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 684 ~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
++++++||....+. ..++.+.+.+||++
T Consensus 258 ~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 258 HVFSKCGAWAQWEH-ADEFNRLVIDFLRH 285 (286)
T ss_dssp EEESSCCSCHHHHT-HHHHHHHHHHHHHH
T ss_pred EEeCCCCCCccccC-HHHHHHHHHHHHhc
Confidence 99999999765443 45788889999875
No 143
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.74 E-value=7.9e-17 Score=162.73 Aligned_cols=196 Identities=13% Similarity=0.006 Sum_probs=130.5
Q ss_pred ccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-----ccchHHHHHHHhCC----cEEEEEcCCCCCCCchh
Q 005093 457 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-----SSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEE 527 (715)
Q Consensus 457 ~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~-----~~~~~~~~~la~~G----~~vi~~d~rG~~~~g~~ 527 (715)
+.+.++ .+.+++|+|++++..+++|+||++||++..... ..+...+..|+++| ++|+++|++|..+.+..
T Consensus 46 ~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~ 124 (297)
T 1gkl_A 46 YTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN 124 (297)
T ss_dssp EEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTT
T ss_pred EEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHH
Confidence 334444 899999999988767889999999997654321 12335667777764 99999999874322111
Q ss_pred hhhcCCCCCCccchhhHHHHHHHHHHcCC------------CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 528 ALQSLPGKVGSQDVNDVLTAIDHVIDMGL------------ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~------------~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
+ .....+| ++.++.+... .|.++++|+|+||||++++.++.++|++|+++++++|..
T Consensus 125 ~--------~~~~~~~---l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 125 F--------YQEFRQN---VIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp H--------HHHHHHT---HHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred H--------HHHHHHH---HHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 1 1111233 3444444422 256789999999999999999999999999999999965
Q ss_pred hhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHH
Q 005093 596 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALR 675 (715)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~ 675 (715)
.+... +. ........+.. ...+.....++++.+|+.|..+ .++.++.++|+
T Consensus 194 ~~~~~---------------~~---------~~~~~~~~~~~---~~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~ 244 (297)
T 1gkl_A 194 WYGNS---------------PQ---------DKANSIAEAIN---RSGLSKREYFVFAATGSEDIAY--ANMNPQIEAMK 244 (297)
T ss_dssp CBSSS---------------HH---------HHHHHHHHHHH---HHTCCTTSCEEEEEEETTCTTH--HHHHHHHHHHH
T ss_pred ccCCc---------------cc---------hhhhHHHHHHh---hccCCcCcEEEEEEeCCCcccc--hhHHHHHHHHH
Confidence 31100 00 00001111111 0112223456777899999764 57889999999
Q ss_pred HcC----------CcEEEEEeCCCCccC
Q 005093 676 EKG----------VETKVIVFPNDVHGI 693 (715)
Q Consensus 676 ~~g----------~~~~~~~~~~~~H~~ 693 (715)
++| .++++.++++++|.+
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 245 ALPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp TSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HcCCccccccccCCceEEEECCCCCcCH
Confidence 988 589999999999975
No 144
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.74 E-value=1.4e-17 Score=175.12 Aligned_cols=233 Identities=13% Similarity=0.121 Sum_probs=142.3
Q ss_pred CCCcEEEEEcCCCCCCCC----------c-cchHHH---HHHHhCCcEEEEEcCCCCCC--------CchhhhhcCCC--
Q 005093 479 SCDPLIVVLHGGPHSVSL----------S-SYSKSL---AFLSSVGYSLLIVNYRGSLG--------FGEEALQSLPG-- 534 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~----------~-~~~~~~---~~la~~G~~vi~~d~rG~~~--------~g~~~~~~~~~-- 534 (715)
.+.|+||++||.+.+... . .|...+ ..|+++||.|+++|+||.|. +|.+.......
T Consensus 40 ~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~ 119 (377)
T 3i1i_A 40 ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDE 119 (377)
T ss_dssp TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSB
T ss_pred CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCc
Confidence 456899999996655322 0 144444 56778999999999997431 11111000000
Q ss_pred ---CCCccchhhHHHHHHHHHHcCCCCCceEE-EEEeChhHHHHHHHHhhCCCceeEEEe-cCCcchhhh----------
Q 005093 535 ---KVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAA-RNPLCNLAL---------- 599 (715)
Q Consensus 535 ---~~~~~~~~d~~~~i~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~a~~~p~~~~~~v~-~~~~~~~~~---------- 599 (715)
.+....++++.+.+..+++. .+.+++. |+||||||.+++.+|.++|++++++|+ +++......
T Consensus 120 ~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3i1i_A 120 YAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAI 197 (377)
T ss_dssp CGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCCHHHHHHTTHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcCCchhhHHHHHHH
Confidence 01133567888777777766 3456786 999999999999999999999999999 665443100
Q ss_pred --hccCC-----C----CC-----------------CceeeeccCCCCCCC-----C-----------------CCCCCh
Q 005093 600 --MVGTT-----D----IP-----------------DWCYVESYGSKGKDS-----F-----------------TESPSV 629 (715)
Q Consensus 600 --~~~~~-----~----~~-----------------~~~~~~~~~~~~~~~-----~-----------------~~~~~~ 629 (715)
..... . .+ ...+...+....... + ......
T Consensus 198 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (377)
T 3i1i_A 198 EAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDA 277 (377)
T ss_dssp HHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCH
T ss_pred HHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHHHHHHhhhhcccCH
Confidence 00000 0 00 000000000000000 0 000000
Q ss_pred hh----HHHHHhcCc-------hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC-CCccCCCCC
Q 005093 630 ED----LTRFHSKSP-------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DVHGIERPQ 697 (715)
Q Consensus 630 ~~----~~~~~~~sp-------~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~ 697 (715)
.. ...+...++ ...+.++++|+|+++|++|.++|++.+..+++.+++.+..++++++++ +||....++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~ 357 (377)
T 3i1i_A 278 NSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFD 357 (377)
T ss_dssp HHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHC
T ss_pred HHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcC
Confidence 00 000011111 335678899999999999999999999999999988777899999998 999765443
Q ss_pred chHHHHHHHHHHHHHhc
Q 005093 698 SDFESFLNIGLWFKKYC 714 (715)
Q Consensus 698 ~~~~~~~~i~~wl~~~l 714 (715)
. .++.+.|.+||++++
T Consensus 358 p-~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 358 I-HLFEKKVYEFLNRKV 373 (377)
T ss_dssp G-GGTHHHHHHHHHSCC
T ss_pred H-HHHHHHHHHHHHhhh
Confidence 3 468889999998765
No 145
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.74 E-value=1e-17 Score=168.09 Aligned_cols=214 Identities=17% Similarity=0.138 Sum_probs=135.3
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|..++...+.| ++.|+||++||.+.. ...|...+..|+++||.|+++|+|| +|.+... ......
T Consensus 11 ~~g~~l~~~~~g~------~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G---~G~s~~~---~~~~~~ 76 (286)
T 3qit_A 11 FGGNQICLCSWGS------PEHPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFG---HGRSSHL---EMVTSY 76 (286)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC---SSGGGC
T ss_pred cCCceEEEeecCC------CCCCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCC---CCCCCCC---CCCCCc
Confidence 3678888777644 246889999997655 5578888999999999999999999 4444211 111233
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc---------------cCC
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---------------GTT 604 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~---------------~~~ 604 (715)
..++..+.+..+++.. +.++++++|||+||.+++.++.++|++++++|+++|........ ...
T Consensus 77 ~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T 3qit_A 77 SSLTFLAQIDRVIQEL--PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSST 154 (286)
T ss_dssp SHHHHHHHHHHHHHHS--CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhc--CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcc
Confidence 4667777666666653 45789999999999999999999999999999999875422110 000
Q ss_pred CC-CCceeeeccCCCCCCCCCCCCChhhHHHH---------------------------------HhcCchhhccCCCCc
Q 005093 605 DI-PDWCYVESYGSKGKDSFTESPSVEDLTRF---------------------------------HSKSPISHISKVKTP 650 (715)
Q Consensus 605 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~sp~~~~~~i~~P 650 (715)
.. ..+........ ................+ ...+....+.++++|
T Consensus 155 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 233 (286)
T 3qit_A 155 PQHPIFPDVATAAS-RLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVP 233 (286)
T ss_dssp CCCCCBSSHHHHHH-HHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSC
T ss_pred ccccccccHHHHHH-HhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCC
Confidence 00 00000000000 00000000000000000 111222345678999
Q ss_pred EEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 651 TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 651 ~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
+|+++|++|..+|.+....+.+.+. .++++++++ ||....
T Consensus 234 ~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~g-gH~~~~ 273 (286)
T 3qit_A 234 TTLVYGDSSKLNRPEDLQQQKMTMT----QAKRVFLSG-GHNLHI 273 (286)
T ss_dssp EEEEEETTCCSSCHHHHHHHHHHST----TSEEEEESS-SSCHHH
T ss_pred eEEEEeCCCcccCHHHHHHHHHHCC----CCeEEEeeC-CchHhh
Confidence 9999999999999888777666553 468999999 997653
No 146
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.74 E-value=9.2e-18 Score=176.77 Aligned_cols=192 Identities=18% Similarity=0.140 Sum_probs=131.9
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhh------hcCCCCC-------C------
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL------QSLPGKV-------G------ 537 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~------~~~~~~~-------~------ 537 (715)
..+++|+||++||++.. ...|...++.|+++||.|+++|+||.+....... ......+ +
T Consensus 94 ~~~~~P~Vv~~HG~~~~--~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 171 (383)
T 3d59_A 94 PGEKYPLVVFSHGLGAF--RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHI 171 (383)
T ss_dssp CSSCEEEEEEECCTTCC--TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHH
T ss_pred cCCCCCEEEEcCCCCCC--chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhh
Confidence 34588999999997655 3467788999999999999999998543211000 0000000 0
Q ss_pred -----ccchhhHHHHHHHHHH--------------------cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecC
Q 005093 538 -----SQDVNDVLTAIDHVID--------------------MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN 592 (715)
Q Consensus 538 -----~~~~~d~~~~i~~l~~--------------------~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 592 (715)
....+|+..+++++.+ ...+|.++|+++|||+||.+++.++.+.+ +++++|+++
T Consensus 172 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~ 250 (383)
T 3d59_A 172 RNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALD 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeC
Confidence 0114688888888876 34467889999999999999999988754 699999988
Q ss_pred CcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHH
Q 005093 593 PLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 672 (715)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~ 672 (715)
|... +... ..+.++++|+|++||++|..+ .. .+..+
T Consensus 251 ~~~~------------------------------p~~~-----------~~~~~i~~P~Lii~g~~D~~~--~~-~~~~~ 286 (383)
T 3d59_A 251 AWMF------------------------------PLGD-----------EVYSRIPQPLFFINSEYFQYP--AN-IIKMK 286 (383)
T ss_dssp CCCT------------------------------TCCG-----------GGGGSCCSCEEEEEETTTCCH--HH-HHHHH
T ss_pred CccC------------------------------CCch-----------hhhccCCCCEEEEecccccch--hh-HHHHH
Confidence 7421 0000 122567899999999999754 22 23335
Q ss_pred HHHHcCCcEEEEEeCCCCccCCC------------------CCch----HHHHHHHHHHHHHhcC
Q 005093 673 ALREKGVETKVIVFPNDVHGIER------------------PQSD----FESFLNIGLWFKKYCK 715 (715)
Q Consensus 673 ~l~~~g~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~i~~wl~~~l~ 715 (715)
++.+.+.+.+++++++++|.+.. .... ..+.+.+++||+++|+
T Consensus 287 ~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~ 351 (383)
T 3d59_A 287 KCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG 351 (383)
T ss_dssp TTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 56566788999999999998631 1112 2233469999999874
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=5.7e-16 Score=177.45 Aligned_cols=263 Identities=11% Similarity=0.075 Sum_probs=174.9
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
.+...+|||| ++++|..+ ..++..+ .+++..+++...... ..++|||||++|+|+.
T Consensus 83 ~v~~~~~spd-~~~~~~~~-----~~i~~~d~~~~~~~~l~~~~~~~----------~~~~~SpdG~~la~~~------- 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQ-----GGLVGFDMLARKVTYLFDTNEET----------ASLDFSPVGDRVAYVR------- 139 (706)
T ss_dssp CCEEEEETTT-TEEEEEET-----TEEEEEETTTTEEEEEECCTTCC----------TTCEECTTSSEEEEEE-------
T ss_pred CceeEEECCC-CeEEEEEC-----CEEEEEECCCCceEEccCCcccc----------cCCcCCCCCCEEEEEE-------
Confidence 4788999999 88888855 2566665 566666665543333 7899999999999952
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC-----CceEeecCCCCCCc------------
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-----GEVQAVKGIPKSLS------------ 185 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-----g~~~~l~~~~~~~~------------ 185 (715)
..+|++||+++ ++.++++ .....
T Consensus 140 --------------------------------------~~~i~v~~~~~~~~~~g~~~~~~--~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 140 --------------------------------------NHNLYIARGGKLGEGMSRAIAVT--IDGTETLVYGQAVHQRE 179 (706)
T ss_dssp --------------------------------------TTEEEEEECBCTTSCCCCCEESC--SCCBTTEEESSCCGGGC
T ss_pred --------------------------------------CCeEEEEecCcccccCCCcEEec--cCCCCCeEcccchhhhh
Confidence 15699999999 8888773 32222
Q ss_pred ---cceEEEecCCCCCccEEEEEeecCcccee--------------eeee----eecCCceEEEEecccccchhhhhhhh
Q 005093 186 ---VGQVVWAPLNEGLHQYLVFVGWSSETRKL--------------GIKY----CYNRPCALYAVRVSLYKSEASELELK 244 (715)
Q Consensus 186 ---~~~~~~spdg~~~~~~i~~~~~~~~~~~~--------------g~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (715)
...+.|||||+. |+|.+........ ...+ ..+....|+++|+
T Consensus 180 ~~~~~~~~~SpDg~~----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~------------- 242 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSC----LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL------------- 242 (706)
T ss_dssp TTCCCSEEECTTSSE----EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET-------------
T ss_pred cCCCceEEECCCCCE----EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC-------------
Confidence 368999999999 9998632110000 0000 0012357999997
Q ss_pred ccCCCCCCceecCCC---CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC-CCCCcccceeeeeecee
Q 005093 245 ESSSEDLPVVNLTES---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 245 ~~~~~~~~~~~lt~~---~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~-~~~~lt~~~~~~~~~~~ 320 (715)
++++.+.++.. ...+..+.|||||++|++.+.... .....|+++|+.++ ..+.+....
T Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~v~~~d~~~g~~~~~~~~~~-------- 304 (706)
T 2z3z_A 243 ----ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA------QNECKVNAYDAETGRFVRTLFVET-------- 304 (706)
T ss_dssp ----TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT------SCEEEEEEEETTTCCEEEEEEEEE--------
T ss_pred ----CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC------CCeeEEEEEECCCCceeeEEEEcc--------
Confidence 77776666532 345778999999999999876532 23457999998886 322221110
Q ss_pred cCCCCCccccccCCCCCCcccc--CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCcee-EEEeecCCEEEEEEeC
Q 005093 321 CAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSW-SLLTLDGDNIIAVSSS 397 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~--dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~-~~~s~~~~~l~~~~~~ 397 (715)
.. .|......+.|+| ||+ +++++..++..+||.++..++..+.++.....+.. ..|+++++.|++....
T Consensus 305 --~~-----~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 305 --DK-----HYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp --CS-----SCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred --CC-----CeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 00 0111234678999 998 55666666778999999877888888776543332 5789999999887755
Q ss_pred CCC-CCeEEEEeeccc
Q 005093 398 PVD-VPQVKYGYFVDK 412 (715)
Q Consensus 398 ~~~-p~~l~~~~~~~~ 412 (715)
... -..|+..++.++
T Consensus 377 ~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCTTCBEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCC
Confidence 321 247888887554
No 148
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.74 E-value=2.8e-17 Score=165.76 Aligned_cols=232 Identities=16% Similarity=0.164 Sum_probs=137.4
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~-~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
.+|..++....-+ ...|+||++||.+ .......|...+..|++. |.|+++|+|| +|.+.... . ..
T Consensus 14 ~~g~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~---~-~~ 79 (285)
T 1c4x_A 14 SGTLASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIG---FGQSEYPE---T-YP 79 (285)
T ss_dssp CTTSCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTT---STTSCCCS---S-CC
T ss_pred ECCEEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCC---CCCCCCCC---C-cc
Confidence 3566776433211 2346799999954 222244666677778665 9999999999 55543211 1 02
Q ss_pred cchhhH----HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh--------hccCCCC
Q 005093 539 QDVNDV----LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--------MVGTTDI 606 (715)
Q Consensus 539 ~~~~d~----~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~--------~~~~~~~ 606 (715)
..++++ .+.+..+++. .+.+++.|+||||||.+++.+|.++|++++++|+++|...... .......
T Consensus 80 ~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 157 (285)
T 1c4x_A 80 GHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYAD 157 (285)
T ss_dssp SSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGS
T ss_pred cchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhcc
Confidence 235555 5545444443 2347899999999999999999999999999999987542100 0000000
Q ss_pred CCceeeeccCCCCCCCCCCC--C------------ChhhHHHHHh------------cCchhhccCCCCcEEEEeeCCCC
Q 005093 607 PDWCYVESYGSKGKDSFTES--P------------SVEDLTRFHS------------KSPISHISKVKTPTIFLLGAQDL 660 (715)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~------------~sp~~~~~~i~~P~Lii~G~~D~ 660 (715)
+.......+........... . .......+.. ......+.++++|+|+++|++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 237 (285)
T 1c4x_A 158 PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDR 237 (285)
T ss_dssp CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCS
T ss_pred ccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCe
Confidence 00000000000000000000 0 0000000000 01223567889999999999999
Q ss_pred cCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 661 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 661 ~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
.+|++.+..+++.+. ..++++++++||....+. ..++.+.+.+||++
T Consensus 238 ~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 238 IVPLDTSLYLTKHLK----HAELVVLDRCGHWAQLER-WDAMGPMLMEHFRA 284 (285)
T ss_dssp SSCTHHHHHHHHHCS----SEEEEEESSCCSCHHHHS-HHHHHHHHHHHHHC
T ss_pred eeCHHHHHHHHHhCC----CceEEEeCCCCcchhhcC-HHHHHHHHHHHHhc
Confidence 999988877766553 478999999999765443 45788889999864
No 149
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.74 E-value=1.2e-17 Score=176.20 Aligned_cols=140 Identities=11% Similarity=0.014 Sum_probs=102.5
Q ss_pred cccCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC------------Cccch----HHHHHHHhCCcEEEEEcCC
Q 005093 456 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS------------LSSYS----KSLAFLSSVGYSLLIVNYR 519 (715)
Q Consensus 456 ~~~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~------------~~~~~----~~~~~la~~G~~vi~~d~r 519 (715)
.+...+|.++.++++.|++. .++.|+||++||++.... ...|. ..++.|+++||+|+++|+|
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~r 173 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNP 173 (398)
T ss_dssp EECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCT
T ss_pred EEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCC
Confidence 55667899999999999842 568999999999755321 00111 4778999999999999999
Q ss_pred CCCCCchhhhhc----------------CCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC
Q 005093 520 GSLGFGEEALQS----------------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 583 (715)
Q Consensus 520 G~~~~g~~~~~~----------------~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 583 (715)
|.++.+...... ....+....+.|+.+++++|.+++.+|.+||+|+||||||++++.+++. ++
T Consensus 174 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~-~~ 252 (398)
T 3nuz_A 174 AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTL-DT 252 (398)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhc-CC
Confidence 955433221100 1111122234799999999999988999999999999999999988886 45
Q ss_pred ceeEEEecCCcchhh
Q 005093 584 KFVAAAARNPLCNLA 598 (715)
Q Consensus 584 ~~~~~v~~~~~~~~~ 598 (715)
+++++|+.+++..+.
T Consensus 253 ~i~a~v~~~~~~~~~ 267 (398)
T 3nuz_A 253 SIYAFVYNDFLCQTQ 267 (398)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred cEEEEEEecccccch
Confidence 788988877665543
No 150
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.74 E-value=7.5e-18 Score=169.63 Aligned_cols=215 Identities=16% Similarity=0.218 Sum_probs=132.0
Q ss_pred CcEEEEEcCCCCC-CCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 481 DPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 481 ~P~vv~iHGg~~~-~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
.|.||++||.+.. .....|...+..| +++|.|+++|+|| +|.+... .. ....+++..+.+..+++.- ..
T Consensus 25 g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~---~~-~~~~~~~~a~dl~~~l~~l--~~ 94 (282)
T 1iup_A 25 GQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVG---FGFTDRP---EN-YNYSKDSWVDHIIGIMDAL--EI 94 (282)
T ss_dssp SSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTT---STTSCCC---TT-CCCCHHHHHHHHHHHHHHT--TC
T ss_pred CCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCC---CCCCCCC---CC-CCCCHHHHHHHHHHHHHHh--CC
Confidence 4679999995432 2223566666677 6789999999999 6655321 11 1234566666555555542 34
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh-------hhccCCCCCCceee----eccC-CCC------CC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-------LMVGTTDIPDWCYV----ESYG-SKG------KD 621 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~-------~~~~~~~~~~~~~~----~~~~-~~~------~~ 621 (715)
+++.|+||||||.+++.+|.++|++++++|+++|..... ..... .+..... ..+. ... ..
T Consensus 95 ~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (282)
T 1iup_A 95 EKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY--TPSIENMRNLLDIFAYDRSLVTDELAR 172 (282)
T ss_dssp CSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC--CSCHHHHHHHHHHHCSSGGGCCHHHHH
T ss_pred CceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC--CCcHHHHHHHHHHhhcCcccCCHHHHH
Confidence 789999999999999999999999999999998754210 00000 0000000 0000 000 00
Q ss_pred -CC--CCCCCh-hhHHHHH----------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC
Q 005093 622 -SF--TESPSV-EDLTRFH----------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 687 (715)
Q Consensus 622 -~~--~~~~~~-~~~~~~~----------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 687 (715)
.+ ...+.. .....+. ...+...+.++++|+|+++|++|..+|++.+..+.+.+. ..++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~----~~~~~~i~ 248 (282)
T 1iup_A 173 LRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID----RAQLHVFG 248 (282)
T ss_dssp HHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT----TEEEEEES
T ss_pred HHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCC----CCeEEEEC
Confidence 00 000000 0000000 000114567889999999999999999888777766553 47899999
Q ss_pred CCCccCCCCCchHHHHHHHHHHHHH
Q 005093 688 NDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 688 ~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
++||....+. ..++.+.+.+|+++
T Consensus 249 ~~gH~~~~e~-p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 249 RCGHWTQIEQ-TDRFNRLVVEFFNE 272 (282)
T ss_dssp SCCSCHHHHS-HHHHHHHHHHHHHT
T ss_pred CCCCCccccC-HHHHHHHHHHHHhc
Confidence 9999765433 45788899999975
No 151
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.73 E-value=3e-17 Score=166.21 Aligned_cols=232 Identities=17% Similarity=0.163 Sum_probs=134.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++...+-+ +.+.|.||++||++... ..|...+..++++||.|+++|+|| +|.+.... .....
T Consensus 13 ~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~----~~~~~ 78 (293)
T 1mtz_A 13 NGIYIYYKLCKA-----PEEKAKLMTMHGGPGMS--HDYLLSLRDMTKEGITVLFYDQFG---CGRSEEPD----QSKFT 78 (293)
T ss_dssp TTEEEEEEEECC-----SSCSEEEEEECCTTTCC--SGGGGGGGGGGGGTEEEEEECCTT---STTSCCCC----GGGCS
T ss_pred CCEEEEEEEECC-----CCCCCeEEEEeCCCCcc--hhHHHHHHHHHhcCcEEEEecCCC---CccCCCCC----CCccc
Confidence 456665444321 12237799999965442 223333445568899999999999 55543211 11123
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-----CCCCCc------
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDW------ 609 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-----~~~~~~------ 609 (715)
++++.+.+..+++.- .+.+++.|+||||||.+++.+|.++|++++++|+++|.......... ...+..
T Consensus 79 ~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (293)
T 1mtz_A 79 IDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK 157 (293)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHH
Confidence 444444444444431 02368999999999999999999999999999999987643211000 000000
Q ss_pred -----------eee---eccCCCCCCCCCCCCChhhHHH---------HH---------------hcCchhhccCCCCcE
Q 005093 610 -----------CYV---ESYGSKGKDSFTESPSVEDLTR---------FH---------------SKSPISHISKVKTPT 651 (715)
Q Consensus 610 -----------~~~---~~~~~~~~~~~~~~~~~~~~~~---------~~---------------~~sp~~~~~~i~~P~ 651 (715)
.+. ..+...........+ ...... +. ..+....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 236 (293)
T 1mtz_A 158 KYGSSGSYENPEYQEAVNYFYHQHLLRSEDWP-PEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPT 236 (293)
T ss_dssp HHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCC-HHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCE
T ss_pred HhhccCCcChHHHHHHHHHHHHhhcccccCch-HHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCE
Confidence 000 000000000000001 000000 00 111223456788999
Q ss_pred EEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 652 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 652 Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
|+++|++| .+++..+..+.+.+ ..+++++++++||....+ ...++.+.+.+||+++|
T Consensus 237 lii~G~~D-~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 237 LITVGEYD-EVTPNVARVIHEKI----AGSELHVFRDCSHLTMWE-DREGYNKLLSDFILKHL 293 (293)
T ss_dssp EEEEETTC-SSCHHHHHHHHHHS----TTCEEEEETTCCSCHHHH-SHHHHHHHHHHHHHTCC
T ss_pred EEEeeCCC-CCCHHHHHHHHHhC----CCceEEEeCCCCCCcccc-CHHHHHHHHHHHHHhcC
Confidence 99999999 67766666665554 347899999999986544 35578899999998764
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=6.3e-17 Score=185.81 Aligned_cols=312 Identities=10% Similarity=0.002 Sum_probs=184.1
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC-----
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS----- 119 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~----- 119 (715)
..++|||||+ +++.... ..++..+ .+|+.++++........ .+..++|||||++|+|.+....
T Consensus 19 ~~~~~s~dg~-~~~~~~d----~~i~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~SpDg~~la~~~~~~~~~~~s 87 (719)
T 1z68_A 19 FFPNWISGQE-YLHQSAD----NNIVLYNIETGQSYTILSNRTMKSV------NASNYGLSPDRQFVYLESDYSKLWRYS 87 (719)
T ss_dssp CCCEESSSSE-EEEECTT----SCEEEEESSSCCEEEEECHHHHHTT------TCSEEEECTTSSEEEEEEEEEECSSSC
T ss_pred CccEECCCCe-EEEEcCC----CCEEEEEcCCCcEEEEEcccccccc------ceeeEEECCCCCeEEEEecCceeEEee
Confidence 4679999994 5454332 2566655 67777777654221000 1268999999999999876321
Q ss_pred --CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCC-------------
Q 005093 120 --PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------- 184 (715)
Q Consensus 120 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~------------- 184 (715)
.....+........ .............|.|| |..++......|++|++++|+.++++ ..+..
T Consensus 88 ~~~~i~~~d~~~g~~~-~~~~l~~~~~~~~~SPD-G~~la~~~~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ 164 (719)
T 1z68_A 88 YTATYYIYDLSNGEFV-RGNELPRPIQYLCWSPV-GSKLAYVYQNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYE 164 (719)
T ss_dssp EEEEEEEEETTTTEEC-CSSCCCSSBCCEEECSS-TTCEEEEETTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHH
T ss_pred cceEEEEEECCCCccc-cceecCcccccceECCC-CCEEEEEECCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceee
Confidence 11111111111110 00111123446778888 67776667789999999999988884 12211
Q ss_pred -----ccceEEEecCCCCCccEEEEEeecCcccee-------------eeee------eecCCceEEEEecccccchhhh
Q 005093 185 -----SVGQVVWAPLNEGLHQYLVFVGWSSETRKL-------------GIKY------CYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 185 -----~~~~~~~spdg~~~~~~i~~~~~~~~~~~~-------------g~~~------~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
....++|||||+. |+|.+......+. .... ..+....|+++|+
T Consensus 165 ee~~~~~~~~~wSPDG~~----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~--------- 231 (719)
T 1z68_A 165 EEMLATKYALWWSPNGKF----LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT--------- 231 (719)
T ss_dssp HHTTCSSCCEEECTTSSE----EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES---------
T ss_pred eecccCcccEEECCCCCE----EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC---------
Confidence 1147999999999 9998753221000 0000 0012237889997
Q ss_pred hhhhccCCCCCCce---ec------CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeee----cCCCCCCC
Q 005093 241 LELKESSSEDLPVV---NL------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID----WPTNGNFS 307 (715)
Q Consensus 241 ~~~~~~~~~~~~~~---~l------t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~----~~~~~~~~ 307 (715)
++++.. .+ ......+..++|||||+ +++...... ....+|+++| +.+++.+.
T Consensus 232 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~------~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 232 --------TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRV------QNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp --------SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESS------TTEEEEEEEEECSSSSSEECCG
T ss_pred --------CCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccc------cCeEEEEEEcccCCCCCCceEE
Confidence 555432 33 23455678899999976 555533221 2235799999 77766555
Q ss_pred cccceeeeeeceecCCCCCccccccC--CCCCCccccCCCEEEEE-eeeCCeeEEEEEECCCCcEEEecCCCCCceeEEE
Q 005093 308 SLEKIVDVIPVVQCAEGDCFPGLYSS--SILSNPWLSDGCTMLLS-SIWGSSQVIISVNVSSGELLRITPAESNFSWSLL 384 (715)
Q Consensus 308 lt~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~dg~~l~~~-~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~ 384 (715)
++.... ...+. |.. ....+.|+|||+.+++. +...+..+||.+|+.+++.++++.....+....+
T Consensus 297 ~~~~~~-------~~~~~-----~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~ 364 (719)
T 1z68_A 297 TQEHIE-------ESRTG-----WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFR 364 (719)
T ss_dssp GGEEEE-------ECSSS-----CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEE
T ss_pred EEeccc-------ccCCc-----eEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEE
Confidence 442000 00000 100 01267899999988774 4456778999999999998888876544444455
Q ss_pred eecCCEEEEEEeC---CCCCCeEEEEeeccc
Q 005093 385 TLDGDNIIAVSSS---PVDVPQVKYGYFVDK 412 (715)
Q Consensus 385 s~~~~~l~~~~~~---~~~p~~l~~~~~~~~ 412 (715)
+ +++.|++++.. ......||.+++.++
T Consensus 365 ~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 365 V-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp E-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred E-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 6 88899888754 123456787776433
No 153
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.73 E-value=4.8e-17 Score=164.45 Aligned_cols=216 Identities=15% Similarity=0.187 Sum_probs=136.7
Q ss_pred CCcEEEEEcCCCCCCCCccch-HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~-~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+.|.||++||.+.. ...|. ..+..|+++||.|+++|+|| +|.+.. + .....++..+.+..+++. ++
T Consensus 42 ~~~~vv~lHG~~~~--~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~s~~---~---~~~~~~~~~~~~~~~l~~--l~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGA--GRTWHPHQVPAFLAAGYRCITFDNRG---IGATEN---A---EGFTTQTMVADTAALIET--LD 108 (293)
T ss_dssp SSEEEEEECCTTCC--GGGGTTTTHHHHHHTTEEEEEECCTT---SGGGTT---C---CSCCHHHHHHHHHHHHHH--HT
T ss_pred CCCEEEEECCCCCc--hhhcchhhhhhHhhcCCeEEEEccCC---CCCCCC---c---ccCCHHHHHHHHHHHHHh--cC
Confidence 56889999996655 44566 56788889999999999999 565431 1 122455555555555544 24
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc------------CCCCCC-cee----eeccCCCCC-
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------TTDIPD-WCY----VESYGSKGK- 620 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~------------~~~~~~-~~~----~~~~~~~~~- 620 (715)
.+++.|+|||+||.+++.+|.++|++++++|+++|......... ...... +.. ...+.....
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 57899999999999999999999999999999998653211100 000000 000 000000000
Q ss_pred ------------CCCCCCCChhhHHH---HHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEE
Q 005093 621 ------------DSFTESPSVEDLTR---FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 685 (715)
Q Consensus 621 ------------~~~~~~~~~~~~~~---~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~ 685 (715)
.............. ....+....+.++++|+|+++|++|..+|++.+..+.+.+. .+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~ 264 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALP----NGRYLQ 264 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST----TEEEEE
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCC----CceEEE
Confidence 00000000000000 01122334567889999999999999999888777776663 478999
Q ss_pred eCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 686 FPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 686 ~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
++++||..... ...++.+.|.+||++.
T Consensus 265 ~~~~gH~~~~~-~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 265 IPDAGHLGFFE-RPEAVNTAMLKFFASV 291 (293)
T ss_dssp ETTCCTTHHHH-SHHHHHHHHHHHHHTC
T ss_pred eCCCcchHhhh-CHHHHHHHHHHHHHhc
Confidence 99999986543 3457888899999763
No 154
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.73 E-value=1.6e-17 Score=166.87 Aligned_cols=213 Identities=17% Similarity=0.228 Sum_probs=130.0
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCce
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 561 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~ 561 (715)
|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+.... .....++..+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~~~~~~~~~~dl~~~l~~--l~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLD--GHSWERQTRELLAQGYRVITYDRRG---FGGSSKVN-----TGYDYDTFAADLHTVLET--LDLRD 91 (279)
T ss_dssp EEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTT---STTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CcEEEEcCCCch--hhHHhhhHHHHHhCCcEEEEeCCCC---CCCCCCCC-----CCCCHHHHHHHHHHHHHh--cCCCc
Confidence 459999996654 5678888999999999999999999 55543211 122344444444444443 23578
Q ss_pred EEEEEeChhHHHHHHHHhhCCC-ceeEEEecCCcchhhhhccCCCC--CCcee--------------eeccCCCCCCC--
Q 005093 562 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMVGTTDI--PDWCY--------------VESYGSKGKDS-- 622 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~~~~~~--~~~~~--------------~~~~~~~~~~~-- 622 (715)
+.|+||||||.+++.+|.++|+ +++++|++++............. ..... ...+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDE 171 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhccc
Confidence 9999999999999999999998 99999999874321100000000 00000 00000000000
Q ss_pred -CCCCCChhhHHHHH------------------hcCchhhccCC---CCcEEEEeeCCCCcCCchHH-HHHHHHHHHcCC
Q 005093 623 -FTESPSVEDLTRFH------------------SKSPISHISKV---KTPTIFLLGAQDLRVPVSNG-LQYARALREKGV 679 (715)
Q Consensus 623 -~~~~~~~~~~~~~~------------------~~sp~~~~~~i---~~P~Lii~G~~D~~v~~~~~-~~~~~~l~~~g~ 679 (715)
............+. ..+....+.++ ++|+|+++|++|..+|++.+ ..+.+.+ .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~----~ 247 (279)
T 1hkh_A 172 NLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV----P 247 (279)
T ss_dssp HBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHC----T
T ss_pred CCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhC----C
Confidence 00000000000000 11122245567 89999999999999998876 5555544 3
Q ss_pred cEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 680 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 680 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.+++++++++||..... ...++.+.|.+||+
T Consensus 248 ~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 248 EADYVEVEGAPHGLLWT-HADEVNAALKTFLA 278 (279)
T ss_dssp TSEEEEETTCCTTHHHH-THHHHHHHHHHHHH
T ss_pred CeeEEEeCCCCccchhc-CHHHHHHHHHHHhh
Confidence 47899999999987543 44578888999986
No 155
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.73 E-value=1.9e-17 Score=167.54 Aligned_cols=231 Identities=17% Similarity=0.187 Sum_probs=138.6
Q ss_pred CC-ceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCc
Q 005093 461 AQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 538 (715)
Q Consensus 461 ~g-~~l~~~l~~P~~~~~~~~~P~vv~iHGg~-~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~ 538 (715)
+| ..++.... +.++.|.||++||.+ .......|...+..|++. |.|+++|+|| ||.+... .. ..
T Consensus 21 ~g~~~l~y~~~------G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~---~~-~~ 86 (291)
T 2wue_A 21 DGPLKLHYHEA------GVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPG---YGHSDKR---AE-HG 86 (291)
T ss_dssp SSEEEEEEEEE------CTTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTT---STTSCCC---SC-CS
T ss_pred CCcEEEEEEec------CCCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCC---CCCCCCC---CC-CC
Confidence 56 67764433 123346899999963 222244676777888665 9999999999 6655321 11 12
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC--C----------CC
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT--T----------DI 606 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~--~----------~~ 606 (715)
..+++..+.+..+++. .+.+++.|+||||||.+++.+|.++|++++++|++++.......... . ..
T Consensus 87 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164 (291)
T ss_dssp SHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhcc
Confidence 3455655555555544 23478999999999999999999999999999999875421000000 0 00
Q ss_pred CCceeeeccCCCCCCCCCCCC------------ChhhHHHHHh-----cC-----ch--hhccCCCCcEEEEeeCCCCcC
Q 005093 607 PDWCYVESYGSKGKDSFTESP------------SVEDLTRFHS-----KS-----PI--SHISKVKTPTIFLLGAQDLRV 662 (715)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-----~s-----p~--~~~~~i~~P~Lii~G~~D~~v 662 (715)
+.+.....+............ .......+.. .+ .. ..+.++++|+|+++|++|..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 244 (291)
T 2wue_A 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVN 244 (291)
T ss_dssp CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSS
T ss_pred CCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCC
Confidence 000000000000000000000 0000000000 00 11 456788999999999999999
Q ss_pred CchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 663 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 663 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
|++.+..+.+.+. ..++++++++||....+. ...+.+.|.+||++
T Consensus 245 ~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 245 PLDGALVALKTIP----RAQLHVFGQCGHWVQVEK-FDEFNKLTIEFLGG 289 (291)
T ss_dssp CGGGGHHHHHHST----TEEEEEESSCCSCHHHHT-HHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHCC----CCeEEEeCCCCCChhhhC-HHHHHHHHHHHHhc
Confidence 9988877766553 478999999999765433 45778888888864
No 156
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.73 E-value=2.3e-17 Score=165.07 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=133.5
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
+.|+||++||++... ..|...+..|++ ||.|+++|+|| +|.+.. +........+++.+.+..+++.. +.
T Consensus 22 ~~~~vv~~HG~~~~~--~~~~~~~~~L~~-~~~vi~~d~~G---~G~s~~---~~~~~~~~~~~~~~~~~~~~~~l--~~ 90 (278)
T 3oos_A 22 EGPPLCVTHLYSEYN--DNGNTFANPFTD-HYSVYLVNLKG---CGNSDS---AKNDSEYSMTETIKDLEAIREAL--YI 90 (278)
T ss_dssp SSSEEEECCSSEECC--TTCCTTTGGGGG-TSEEEEECCTT---STTSCC---CSSGGGGSHHHHHHHHHHHHHHT--TC
T ss_pred CCCeEEEEcCCCcch--HHHHHHHHHhhc-CceEEEEcCCC---CCCCCC---CCCcccCcHHHHHHHHHHHHHHh--CC
Confidence 457899999976553 345666677777 99999999999 554431 11112234667777666666653 45
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCC-----CCcee----eeccCCC------------
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-----PDWCY----VESYGSK------------ 618 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~------------ 618 (715)
++++++|||+||.+++.++.++|++++++|+++|............. ..... ...+...
T Consensus 91 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T 3oos_A 91 NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSR 170 (278)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHH
T ss_pred CeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHH
Confidence 68999999999999999999999999999999998762111100000 00000 0000000
Q ss_pred -----------CCCCCCCCC-----ChhhHHHHH-----hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHc
Q 005093 619 -----------GKDSFTESP-----SVEDLTRFH-----SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 677 (715)
Q Consensus 619 -----------~~~~~~~~~-----~~~~~~~~~-----~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~ 677 (715)
....+...+ .......+. ..+....+.++++|+|+++|++|..+|++.+..+.+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 248 (278)
T 3oos_A 171 EWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIP-- 248 (278)
T ss_dssp HHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST--
T ss_pred HHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCC--
Confidence 000000000 001111111 223345567889999999999999999988877777663
Q ss_pred CCcEEEEEeCCCCccCCCCCchHHHHHHHHHH
Q 005093 678 GVETKVIVFPNDVHGIERPQSDFESFLNIGLW 709 (715)
Q Consensus 678 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~w 709 (715)
.+++++++++||.+... ...++.+.|.+|
T Consensus 249 --~~~~~~~~~~gH~~~~~-~p~~~~~~i~~f 277 (278)
T 3oos_A 249 --NATLTKFEESNHNPFVE-EIDKFNQFVNDT 277 (278)
T ss_dssp --TEEEEEETTCSSCHHHH-SHHHHHHHHHHT
T ss_pred --CcEEEEcCCcCCCcccc-cHHHHHHHHHhh
Confidence 47999999999986533 333555555555
No 157
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.73 E-value=2.8e-17 Score=169.53 Aligned_cols=236 Identities=17% Similarity=0.256 Sum_probs=136.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
+|.+++....-|.+ ...+.+.||++||++.. ...|...+..|++ .||.|+++|+|| +|.+.... +......
T Consensus 36 ~g~~l~y~~~G~~~--~~~~g~plvllHG~~~~--~~~w~~~~~~l~~~~~~~Via~D~rG---~G~S~~~~-~~~~~~~ 107 (330)
T 3nwo_A 36 GDHETWVQVTTPEN--AQPHALPLIVLHGGPGM--AHNYVANIAALADETGRTVIHYDQVG---CGNSTHLP-DAPADFW 107 (330)
T ss_dssp TTEEEEEEEECCSS--CCTTCCCEEEECCTTTC--CSGGGGGGGGHHHHHTCCEEEECCTT---STTSCCCT-TSCGGGC
T ss_pred cCcEEEEEEecCcc--CCCCCCcEEEECCCCCC--chhHHHHHHHhccccCcEEEEECCCC---CCCCCCCC-CCccccc
Confidence 67778776665531 11112358899997655 3356666666765 799999999999 55553200 0011112
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc------------------
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------------------ 601 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~------------------ 601 (715)
..+++.+.+..+++. ...+++.|+||||||.+++.+|.++|++++++|++++........
T Consensus 108 ~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T 3nwo_A 108 TPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAAL 185 (330)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHH
Confidence 344444444444433 234789999999999999999999999999999988754321100
Q ss_pred ------cCCCCCCcee-eeccCCCCCCCCCCCCChhhHHH----------H---------------HhcCchhhccCCCC
Q 005093 602 ------GTTDIPDWCY-VESYGSKGKDSFTESPSVEDLTR----------F---------------HSKSPISHISKVKT 649 (715)
Q Consensus 602 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~---------------~~~sp~~~~~~i~~ 649 (715)
.....+.+.. ...+...........+ ...... + ...+....+.++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 264 (330)
T 3nwo_A 186 DRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTP-QDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTA 264 (330)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCC-HHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCS
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHhhccccCCC-HHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCC
Confidence 0000000000 0000000000000000 000000 0 01122345677899
Q ss_pred cEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 650 PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 650 P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
|+|+++|++|.++| ..+..+.+.+ ...++++++++||....+ ...++.+.|.+||+++
T Consensus 265 P~Lvi~G~~D~~~p-~~~~~~~~~i----p~~~~~~i~~~gH~~~~e-~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 265 PVLVIAGEHDEATP-KTWQPFVDHI----PDVRSHVFPGTSHCTHLE-KPEEFRAVVAQFLHQH 322 (330)
T ss_dssp CEEEEEETTCSSCH-HHHHHHHHHC----SSEEEEEETTCCTTHHHH-SHHHHHHHHHHHHHHH
T ss_pred CeEEEeeCCCccCh-HHHHHHHHhC----CCCcEEEeCCCCCchhhc-CHHHHHHHHHHHHHhc
Confidence 99999999999875 3444444433 458999999999976644 3457889999999875
No 158
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.72 E-value=6.1e-17 Score=164.21 Aligned_cols=229 Identities=17% Similarity=0.157 Sum_probs=136.5
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
..++....-|. ...|.||++||.+.. ...|...+..|+++||.|+++|+|| ||.+... .......++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~---~~~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFG---FGRSDKP---TDDAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEE---SCGGGCCHH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCC---CCCCCCC---CCcccCCHH
Confidence 77765544321 115789999997654 5578888899999999999999999 6655321 111122355
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-----------cc-CCCCCCce
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----------VG-TTDIPDWC 610 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----------~~-~~~~~~~~ 610 (715)
+..+.+..+++. .+.+++.|+||||||.+++.+|.++|++++++|++++....... .. ........
T Consensus 100 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (297)
T 2xt0_A 100 FHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGK 177 (297)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHH
T ss_pred HHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhH
Confidence 555555444444 23478999999999999999999999999999999874310000 00 00000000
Q ss_pred eee----ccCCCCCCCCCC-CCCh---hhHHHHHhc--------------Cchhhcc-CCCCcEEEEeeCCCCcCCchHH
Q 005093 611 YVE----SYGSKGKDSFTE-SPSV---EDLTRFHSK--------------SPISHIS-KVKTPTIFLLGAQDLRVPVSNG 667 (715)
Q Consensus 611 ~~~----~~~~~~~~~~~~-~~~~---~~~~~~~~~--------------sp~~~~~-~i~~P~Lii~G~~D~~v~~~~~ 667 (715)
... .+.......+.. .... .....+... .....+. ++++|+|+++|++|..+| ..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~ 256 (297)
T 2xt0_A 178 LMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEV 256 (297)
T ss_dssp HHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHH
T ss_pred HHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHH
Confidence 000 000000000000 0000 000011000 0112356 899999999999999998 777
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 668 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 668 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..+.+.+.. .....+.++++||.... ...++.+.|.+|++
T Consensus 257 ~~~~~~~p~--~~~~~~~~~~~GH~~~~--~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 257 MGMLRQAIR--GCPEPMIVEAGGHFVQE--HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHST--TCCCCEEETTCCSSGGG--GCHHHHHHHHHHTT
T ss_pred HHHHHhCCC--CeeEEeccCCCCcCccc--CHHHHHHHHHHHHh
Confidence 777666643 33334457899998765 55688888999875
No 159
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.72 E-value=1.9e-17 Score=164.06 Aligned_cols=215 Identities=16% Similarity=0.131 Sum_probs=128.1
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|.||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+... . ...+++..+.+..+++. ...
T Consensus 15 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~---~---~~~~~~~a~dl~~~l~~--l~~ 80 (255)
T 3bf7_A 15 NNSPIVLVHGLFGS--LDNLGVLARDLVND-HNIIQVDVRN---HGLSPRE---P---VMNYPAMAQDLVDTLDA--LQI 80 (255)
T ss_dssp CCCCEEEECCTTCC--TTTTHHHHHHHTTT-SCEEEECCTT---STTSCCC---S---CCCHHHHHHHHHHHHHH--HTC
T ss_pred CCCCEEEEcCCccc--HhHHHHHHHHHHhh-CcEEEecCCC---CCCCCCC---C---CcCHHHHHHHHHHHHHH--cCC
Confidence 45779999996654 45678888888766 9999999999 6655321 1 12344444444333333 134
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh------h----hcc--CCCCCCceee-eccCCCCC------
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA------L----MVG--TTDIPDWCYV-ESYGSKGK------ 620 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~------~----~~~--~~~~~~~~~~-~~~~~~~~------ 620 (715)
+++.|+||||||.+++.+|.++|++++++|++++..... . +.. .......... ..+.....
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHH
Confidence 689999999999999999999999999999875321000 0 000 0000000000 00000000
Q ss_pred ---CCCCC---CCChhhHH-HHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 621 ---DSFTE---SPSVEDLT-RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 621 ---~~~~~---~~~~~~~~-~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
..+.. ........ .+........+.++++|+|+++|++|..++++.+..+.+.+ ...++++++++||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~ 236 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF----PQARAHVIAGAGHWV 236 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC----TTEEECCBTTCCSCH
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC----CCCeEEEeCCCCCcc
Confidence 00000 00000000 00000000124578899999999999999988776665554 348899999999986
Q ss_pred CCCCchHHHHHHHHHHHHHh
Q 005093 694 ERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~~~ 713 (715)
..+. ...+.+.+.+|+++|
T Consensus 237 ~~e~-p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 237 HAEK-PDAVLRAIRRYLNDH 255 (255)
T ss_dssp HHHC-HHHHHHHHHHHHHTC
T ss_pred ccCC-HHHHHHHHHHHHhcC
Confidence 6444 457888999999865
No 160
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.72 E-value=1.8e-17 Score=169.19 Aligned_cols=230 Identities=16% Similarity=0.177 Sum_probs=138.1
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
..++....-|. .+.|.||++||.+.. ...|...+..|+++||.|+++|+|| ||.+... .......++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~---~~~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTW--SYLYRKMIPVFAESGARVIAPDFFG---FGKSDKP---VDEEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEE---SCGGGCCHH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCeEEEeCCCC---CCCCCCC---CCcCCcCHH
Confidence 77765554332 114789999997654 5578888899999999999999999 6665321 111123355
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch--hhh------hccCCCCC--Cceee
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN--LAL------MVGTTDIP--DWCYV 612 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~--~~~------~~~~~~~~--~~~~~ 612 (715)
+..+.+..+++. .+.+++.|+||||||.+++.+|.++|++++++|++++... ... ........ .|...
T Consensus 101 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 1b6g_A 101 FHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHH
Confidence 555555544444 2347899999999999999999999999999999987431 000 00000000 00000
Q ss_pred ec-----------------cCCCCCCCCCC-CCCh---hhHHHHHh--c-----------Cchhhcc-CCCCcEEEEeeC
Q 005093 613 ES-----------------YGSKGKDSFTE-SPSV---EDLTRFHS--K-----------SPISHIS-KVKTPTIFLLGA 657 (715)
Q Consensus 613 ~~-----------------~~~~~~~~~~~-~~~~---~~~~~~~~--~-----------sp~~~~~-~i~~P~Lii~G~ 657 (715)
.. +.......+.. .... .....+.. . .....+. ++++|+|+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~ 258 (310)
T 1b6g_A 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGM 258 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET
T ss_pred hccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEecc
Confidence 00 00000000000 0000 00000000 0 0112356 899999999999
Q ss_pred CCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 658 QDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 658 ~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+|..+| ..+..+.+.+.. .....++++++||.... ...++.+.|.+|+++
T Consensus 259 ~D~~~~-~~~~~~~~~ip~--~~~~~i~~~~~GH~~~~--~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 259 KDKLLG-PDVMYPMKALIN--GCPEPLEIADAGHFVQE--FGEQVAREALKHFAE 308 (310)
T ss_dssp TCSSSS-HHHHHHHHHHST--TCCCCEEETTCCSCGGG--GHHHHHHHHHHHHHH
T ss_pred Ccchhh-hHHHHHHHhccc--ccceeeecCCcccchhh--ChHHHHHHHHHHHhc
Confidence 999999 777777666643 23333334999998775 566889999999975
No 161
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.72 E-value=4.7e-17 Score=153.46 Aligned_cols=180 Identities=16% Similarity=0.117 Sum_probs=121.3
Q ss_pred CcEEEEEcCCCCCCCCccchHHHH-HHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~-~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
.|.||++||.+.... ..|...+. .|+++||.|+++|+|.+.. + ..+++.+.+..+.+. . .
T Consensus 4 ~p~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~---------~------~~~~~~~~~~~~~~~--~-~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASST-NHWFPWLKKRLLADGVQADILNMPNPLQ---------P------RLEDWLDTLSLYQHT--L-H 64 (192)
T ss_dssp CCEEEEECCTTCCTT-STTHHHHHHHHHHTTCEEEEECCSCTTS---------C------CHHHHHHHHHTTGGG--C-C
T ss_pred CCEEEEEcCCCCCcc-hhHHHHHHHHHHhCCcEEEEecCCCCCC---------C------CHHHHHHHHHHHHHh--c-c
Confidence 578999999765532 14666564 6889999999999993211 1 355555555544444 2 5
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCC--ceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHh
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHS 637 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (715)
++++++|||+||.+++.++.++|+ +++++|+++|....... +. . ...+...+.
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~--------~~---~-----~~~~~~~~~--------- 119 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT--------LQ---M-----LDEFTQGSF--------- 119 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT--------CG---G-----GGGGTCSCC---------
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc--------ch---h-----hhhhhhcCC---------
Confidence 789999999999999999999999 99999999986542110 00 0 000100010
Q ss_pred cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCC--chHHHHHHHHHHHH
Q 005093 638 KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ--SDFESFLNIGLWFK 711 (715)
Q Consensus 638 ~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~wl~ 711 (715)
....+.++++|+|+++|++|..+|++.+..+.+.+ ..++++++++||.+.... ...++.+.+.+|++
T Consensus 120 --~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 120 --DHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 188 (192)
T ss_dssp --CHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-----TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred --CHHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-----CceEEEeCCCcCcccccccccHHHHHHHHHHHHH
Confidence 01234456689999999999999999888877766 367899999999876432 22334445555554
No 162
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.72 E-value=8e-17 Score=160.34 Aligned_cols=218 Identities=17% Similarity=0.103 Sum_probs=129.7
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+..|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.... .....+++..+.+..+++.-. .
T Consensus 8 ~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~l~-~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLG--AWIWYKLKPLLESAGHKVTAVDLSA---AGINPRRL----DEIHTFRDYSEPLMEVMASIP-P 77 (264)
T ss_dssp -CCCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHHHHHHHHHHHSC-T
T ss_pred CCCCeEEEECCCccc--cchHHHHHHHHHhCCCEEEEeecCC---CCCCCCCc----ccccCHHHHHHHHHHHHHHhC-C
Confidence 456889999997644 4568888999999999999999999 55543110 011235555555554444421 1
Q ss_pred CceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh---------hhccCCCCCCce--eeeccCC----------
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWC--YVESYGS---------- 617 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~---------- 617 (715)
.+++.|+||||||.+++.++.++|++++++|++++..... ..........+. ....+..
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEEC
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhh
Confidence 3689999999999999999999999999999988642100 000000000000 0000000
Q ss_pred --CCC-CCCCCCCChhhHHHHH-hcCch----------hhc---cCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCc
Q 005093 618 --KGK-DSFTESPSVEDLTRFH-SKSPI----------SHI---SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 680 (715)
Q Consensus 618 --~~~-~~~~~~~~~~~~~~~~-~~sp~----------~~~---~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~ 680 (715)
... ..+............. ...+. ..+ ...++|+|+++|++|..+|++.+..+.+.+. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p----~ 233 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVG----A 233 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHC----C
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCC----C
Confidence 000 0000000111111000 00000 000 1135899999999999999888877776663 3
Q ss_pred EEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 681 TKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 681 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
.++++++++||....+. ..++.+.+.+|++
T Consensus 234 ~~~~~i~~~gH~~~~e~-P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 234 DKVKEIKEADHMGMLSQ-PREVCKCLLDISD 263 (264)
T ss_dssp SEEEEETTCCSCHHHHS-HHHHHHHHHHHHC
T ss_pred ceEEEeCCCCCchhhcC-HHHHHHHHHHHhh
Confidence 68899999999866443 3477788888874
No 163
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.72 E-value=2.6e-17 Score=174.17 Aligned_cols=132 Identities=17% Similarity=0.114 Sum_probs=91.0
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC---------ccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL---------SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 532 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~---------~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~ 532 (715)
...+.|+++.|.+..+.+++|+||++||++..... ..+...+..|+++||.|+++|+||.+..+...
T Consensus 60 ~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~---- 135 (397)
T 3h2g_A 60 PATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAY---- 135 (397)
T ss_dssp EEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSS----
T ss_pred eEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCc----
Confidence 35799999999876556789999999997665321 12556788899999999999999954432111
Q ss_pred CCCCCc-----cchhhHHHHHHHHHHc-CCCCCceEEEEEeChhHHHHHHHHhh-CC----C-ceeEEEecCCcchhh
Q 005093 533 PGKVGS-----QDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQ-AP----D-KFVAAAARNPLCNLA 598 (715)
Q Consensus 533 ~~~~~~-----~~~~d~~~~i~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~-~p----~-~~~~~v~~~~~~~~~ 598 (715)
..+.. ..+.|..+++..+.+. +..++++|+|+|||+||++++.++.. .+ + .+.+++..++..++.
T Consensus 136 -~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (397)
T 3h2g_A 136 -HPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALE 212 (397)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHH
T ss_pred -cchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHH
Confidence 11111 2344555555555544 33356899999999999999887622 22 1 578888888877764
No 164
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.72 E-value=2.8e-17 Score=161.04 Aligned_cols=208 Identities=14% Similarity=0.226 Sum_probs=129.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHH------
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVI------ 552 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~------ 552 (715)
++.|+||++||.+.. ...|. .+..|+ +||.|+++|+|| +|.+. .......++..+.+..++
T Consensus 14 ~~~~~vv~~hG~~~~--~~~~~-~~~~l~-~g~~v~~~d~~g---~g~s~------~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCN--LKIFG-ELEKYL-EDYNCILLDLKG---HGESK------GQCPSTVYGYIDNVANFITNSEVT 80 (245)
T ss_dssp TCSCEEEEECCTTCC--GGGGT-TGGGGC-TTSEEEEECCTT---STTCC------SCCCSSHHHHHHHHHHHHHHCTTT
T ss_pred CCCCEEEEEeCCccc--HHHHH-HHHHHH-hCCEEEEecCCC---CCCCC------CCCCcCHHHHHHHHHHHHHhhhhH
Confidence 357899999996655 44555 556665 899999999999 44432 111224556666555555
Q ss_pred HcCCCCCceEEEEEeChhHHHHHHHHhh-CCCceeEEEecCCcchhhhhcc------CCCCCCceeeec-cCC-------
Q 005093 553 DMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVG------TTDIPDWCYVES-YGS------- 617 (715)
Q Consensus 553 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~------- 617 (715)
+. .. +++|+|||+||.+++.++.+ +|+ ++++|+++|......... ........+... ...
T Consensus 81 ~~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (245)
T 3e0x_A 81 KH--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSE 155 (245)
T ss_dssp TT--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHH
T ss_pred hh--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHH
Confidence 33 23 99999999999999999999 999 999999999765411100 000000000000 000
Q ss_pred CCCCCCCCCCC--hhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC
Q 005093 618 KGKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 695 (715)
Q Consensus 618 ~~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 695 (715)
.....+...+. ..........+....+.++++|+|+++|++|..+|.+.+..+.+.+. .+++++++++||.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~ 231 (245)
T 3e0x_A 156 KYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE----NSELKIFETGKHFLLV 231 (245)
T ss_dssp HHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEESSCGGGHHH
T ss_pred HHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC----CceEEEeCCCCcceEE
Confidence 00000000000 01111223344556678899999999999999999888877776653 4889999999998653
Q ss_pred CCchHHHHHHHHHH
Q 005093 696 PQSDFESFLNIGLW 709 (715)
Q Consensus 696 ~~~~~~~~~~i~~w 709 (715)
. ...++.+.+.+|
T Consensus 232 ~-~~~~~~~~i~~f 244 (245)
T 3e0x_A 232 V-NAKGVAEEIKNF 244 (245)
T ss_dssp H-THHHHHHHHHTT
T ss_pred e-cHHHHHHHHHhh
Confidence 3 333555555555
No 165
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.71 E-value=4.5e-17 Score=164.58 Aligned_cols=215 Identities=14% Similarity=0.181 Sum_probs=131.4
Q ss_pred cEEEEEcCCC-CCCCCccchHHH-HHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 482 PLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 482 P~vv~iHGg~-~~~~~~~~~~~~-~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
|.||++||.+ .......|...+ ..|++. |.|+++|+|| +|.+... . ......++..+.+..+++. .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~~-~~vi~~D~~G---~G~S~~~---~-~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAG-YRVILLDCPG---WGKSDSV---V-NSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHTT-CEEEEECCTT---STTSCCC---C-CSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhcC-CeEEEEcCCC---CCCCCCC---C-ccccCHHHHHHHHHHHHHH--hCC
Confidence 3899999954 222234566666 667654 9999999999 5554321 1 1123466666666666665 245
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC------------CCCceeeeccCCCCCCCCCCCC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVESYGSKGKDSFTESP 627 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 627 (715)
+++.|+||||||.+++.+|.++|++++++|++++............ .+.......+....... ....
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFD-TSDL 185 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSC-TTSC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcC-cccC
Confidence 7899999999999999999999999999999887542100000000 00000000000000000 0000
Q ss_pred Chhh--------------HHHHH---------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 628 SVED--------------LTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 628 ~~~~--------------~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
.... ...+. ..+....+.++++|+|+++|++|..+|++.+..+.+.+. ..+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~ 261 (289)
T 1u2e_A 186 TDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIA----GSELH 261 (289)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHST----TCEEE
T ss_pred CHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCC----CcEEE
Confidence 0000 00000 011224567889999999999999999988877776653 36899
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+++++||....+. ..++.+.+.+|+++
T Consensus 262 ~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 262 IFRDCGHWAQWEH-ADAFNQLVLNFLAR 288 (289)
T ss_dssp EESSCCSCHHHHT-HHHHHHHHHHHHTC
T ss_pred EeCCCCCchhhcC-HHHHHHHHHHHhcC
Confidence 9999999865443 45778888888863
No 166
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.71 E-value=2.9e-17 Score=169.44 Aligned_cols=213 Identities=17% Similarity=0.161 Sum_probs=130.9
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..| ||.|+++|+|| +|.+.. ........++..+.+..+++. .+.+
T Consensus 81 ~~~vv~~hG~~~~--~~~~~~~~~~l---g~~Vi~~D~~G---~G~S~~----~~~~~~~~~~~a~dl~~~l~~--l~~~ 146 (330)
T 3p2m_A 81 APRVIFLHGGGQN--AHTWDTVIVGL---GEPALAVDLPG---HGHSAW----REDGNYSPQLNSETLAPVLRE--LAPG 146 (330)
T ss_dssp CCSEEEECCTTCC--GGGGHHHHHHS---CCCEEEECCTT---STTSCC----CSSCBCCHHHHHHHHHHHHHH--SSTT
T ss_pred CCeEEEECCCCCc--cchHHHHHHHc---CCeEEEEcCCC---CCCCCC----CCCCCCCHHHHHHHHHHHHHH--hCCC
Confidence 4779999997655 44566665555 99999999999 554431 111233456666666666655 3457
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCC-CCCCC----------CCCCCCh
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS-KGKDS----------FTESPSV 629 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~ 629 (715)
++.|+|||+||.+++.+|.++|++++++|+++|........................ ..... .......
T Consensus 147 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (330)
T 3p2m_A 147 AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDV 226 (330)
T ss_dssp CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCH
T ss_pred CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCH
Confidence 899999999999999999999999999999998654321100000000000000000 00000 0000000
Q ss_pred hhHHHHHhc------------------------CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE-EE
Q 005093 630 EDLTRFHSK------------------------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK-VI 684 (715)
Q Consensus 630 ~~~~~~~~~------------------------sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~-~~ 684 (715)
......... .....+.++++|+|+++|++|..+|.+.+..+.+.+. ..+ ++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~----~~~~~~ 302 (330)
T 3p2m_A 227 KSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT----HFRGVH 302 (330)
T ss_dssp HHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEE
T ss_pred HHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeeEE
Confidence 000000000 0012456789999999999999999888877766553 467 99
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+++++||.+... ...++.+.|.+||++
T Consensus 303 ~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 303 IVEKSGHSVQSD-QPRALIEIVRGVLDT 329 (330)
T ss_dssp EETTCCSCHHHH-CHHHHHHHHHHHTTC
T ss_pred EeCCCCCCcchh-CHHHHHHHHHHHHhc
Confidence 999999987543 445778888888864
No 167
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.71 E-value=8.7e-17 Score=169.14 Aligned_cols=246 Identities=13% Similarity=0.112 Sum_probs=146.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-------cchHHHH---HHHhCCcEEEEEcCCC-CCCCchhhh
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-------SYSKSLA---FLSSVGYSLLIVNYRG-SLGFGEEAL 529 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-------~~~~~~~---~la~~G~~vi~~d~rG-~~~~g~~~~ 529 (715)
+|..++...+-+. ...+.|+||++||.+...... .|...+. .|+++||.|+++|+|| .++......
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 4555654444332 222368999999976653220 1555543 3668999999999999 343321110
Q ss_pred -hcC-C----CCCCccchhhHHHHHHHHHHcCCCCCceEE-EEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh---
Q 005093 530 -QSL-P----GKVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--- 599 (715)
Q Consensus 530 -~~~-~----~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~--- 599 (715)
... . ..+....++++.+.+..+++. .+.+++. |+||||||.+++.+|.++|++++++|++++......
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 196 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI 196 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHH
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccch
Confidence 000 0 000123577777777777766 3457887 999999999999999999999999999998643210
Q ss_pred -hc-----cCCCCCCcee------------------------------eeccCCCCCCC--------------------C
Q 005093 600 -MV-----GTTDIPDWCY------------------------------VESYGSKGKDS--------------------F 623 (715)
Q Consensus 600 -~~-----~~~~~~~~~~------------------------------~~~~~~~~~~~--------------------~ 623 (715)
.. .....+.|.. ...+....... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 2b61_A 197 GFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKF 276 (377)
T ss_dssp HHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhh
Confidence 00 0000000000 00000000000 0
Q ss_pred CCCCChhhH----HHHHhcC-------chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC-CCCc
Q 005093 624 TESPSVEDL----TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDVH 691 (715)
Q Consensus 624 ~~~~~~~~~----~~~~~~s-------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H 691 (715)
......... ..+...+ ....+.++++|+|+++|++|.++|++++.+..+.+.+....+++++++ ++||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~gH 356 (377)
T 2b61_A 277 LERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGH 356 (377)
T ss_dssp HTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGG
T ss_pred ccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCCc
Confidence 000000000 0011111 134567889999999999999999966666667777666678999999 9999
Q ss_pred cCCCCCchHHHHHHHHHHHHH
Q 005093 692 GIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~ 712 (715)
...... ..++.+.|.+||++
T Consensus 357 ~~~~e~-p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 357 DAFLVD-YDQFEKRIRDGLAG 376 (377)
T ss_dssp GHHHHC-HHHHHHHHHHHHHT
T ss_pred hhhhcC-HHHHHHHHHHHHhc
Confidence 866443 44788899999975
No 168
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.71 E-value=1.2e-16 Score=162.35 Aligned_cols=233 Identities=12% Similarity=0.148 Sum_probs=134.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|.+++....- +.|.||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+............
T Consensus 20 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~v~~~D~~G---~G~S~~~~~~~~~~~~ 85 (306)
T 3r40_A 20 TSSGRIFARVGG--------DGPPLLLLHGFPQT--HVMWHRVAPKLAE-RFKVIVADLPG---YGWSDMPESDEQHTPY 85 (306)
T ss_dssp CTTCCEEEEEEE--------CSSEEEEECCTTCC--GGGGGGTHHHHHT-TSEEEEECCTT---STTSCCCCCCTTCGGG
T ss_pred eCCEEEEEEEcC--------CCCeEEEECCCCCC--HHHHHHHHHHhcc-CCeEEEeCCCC---CCCCCCCCCCcccCCC
Confidence 367777654431 35789999997655 4567778888877 99999999999 5544321111111133
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC--------------C
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT--------------D 605 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~--------------~ 605 (715)
..+++.+.+..+++. .+.+++.|+|||+||.+++.+|.++|++++++|++++........... .
T Consensus 86 ~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (306)
T 3r40_A 86 TKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQ 163 (306)
T ss_dssp SHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTS
T ss_pred CHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhc
Confidence 466666666666665 345789999999999999999999999999999999754321110000 0
Q ss_pred CC----------CceeeeccCCCCCCC-CCCCCChhhHHHHHh--cCc------------------------hhhccCCC
Q 005093 606 IP----------DWCYVESYGSKGKDS-FTESPSVEDLTRFHS--KSP------------------------ISHISKVK 648 (715)
Q Consensus 606 ~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~sp------------------------~~~~~~i~ 648 (715)
.. ...+...+....... ..........+.+.. ..+ ...+.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (306)
T 3r40_A 164 PAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIP 243 (306)
T ss_dssp CTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBC
T ss_pred ccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCC
Confidence 00 000000000000000 000001111111110 000 01347889
Q ss_pred CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 649 TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 649 ~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+|+|+++|++|.+++.....+..+.+ ...++++++ ++||..... ...++.+.|.+||++.
T Consensus 244 ~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~-~~gH~~~~e-~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 244 VPMLALWGASGIAQSAATPLDVWRKW---ASDVQGAPI-ESGHFLPEE-APDQTAEALVRFFSAA 303 (306)
T ss_dssp SCEEEEEETTCC------CHHHHHHH---BSSEEEEEE-SSCSCHHHH-SHHHHHHHHHHHHHC-
T ss_pred cceEEEEecCCcccCchhHHHHHHhh---cCCCeEEEe-cCCcCchhh-ChHHHHHHHHHHHHhc
Confidence 99999999999999854444443333 345777888 679976543 4457888999999864
No 169
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.70 E-value=1.5e-17 Score=168.45 Aligned_cols=225 Identities=13% Similarity=0.190 Sum_probs=139.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++...+-+ ...|+||++||.+.. ...|...+..|+ +||.|+++|+|| +|.+... .....
T Consensus 18 ~g~~l~~~~~g~------~~~~~vl~lHG~~~~--~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~~-----~~~~~ 80 (299)
T 3g9x_A 18 LGERMHYVDVGP------RDGTPVLFLHGNPTS--SYLWRNIIPHVA-PSHRCIAPDLIG---MGKSDKP-----DLDYF 80 (299)
T ss_dssp TTEEEEEEEESC------SSSCCEEEECCTTCC--GGGGTTTHHHHT-TTSCEEEECCTT---STTSCCC-----CCCCC
T ss_pred CCeEEEEEecCC------CCCCEEEEECCCCcc--HHHHHHHHHHHc-cCCEEEeeCCCC---CCCCCCC-----CCccc
Confidence 677776555432 235789999997655 456777777775 699999999999 5544321 11344
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC----------CCC--
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----------IPD-- 608 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~----------~~~-- 608 (715)
.+++.+.+..+++. .+.++++|+|||+||.+++.+|.++|++++++|++++............ .+.
T Consensus 81 ~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (299)
T 3g9x_A 81 FDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVG 158 (299)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHH
T ss_pred HHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcc
Confidence 66777777666665 3457899999999999999999999999999999885433210000000 000
Q ss_pred -------ceeeeccCCCCCCCCCCCCChhhHHHH-----------------Hhc--------------CchhhccCCCCc
Q 005093 609 -------WCYVESYGSKGKDSFTESPSVEDLTRF-----------------HSK--------------SPISHISKVKTP 650 (715)
Q Consensus 609 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~--------------sp~~~~~~i~~P 650 (715)
..+...+.. ..............+ ... +....+.++++|
T Consensus 159 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 235 (299)
T 3g9x_A 159 RELIIDQNAFIEGALP---KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVP 235 (299)
T ss_dssp HHHHTTSCHHHHTHHH---HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSC
T ss_pred hhhhccchhhHHHhhh---hhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCC
Confidence 000000000 000000000111110 000 111235678999
Q ss_pred EEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 651 TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 651 ~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+|+++|++|..+|++.+..+.+.+. .+++++++++||.+.... ..++.+.|.+++.+
T Consensus 236 ~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~-p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 236 KLLFWGTPGVLIPPAEAARLAESLP----NCKTVDIGPGLHYLQEDN-PDLIGSEIARWLPA 292 (299)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHST----TEEEEEEEEESSCHHHHC-HHHHHHHHHHHSGG
T ss_pred eEEEecCCCCCCCHHHHHHHHhhCC----CCeEEEeCCCCCcchhcC-HHHHHHHHHHHHhh
Confidence 9999999999999988877776653 478999999999865433 44667777776654
No 170
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.70 E-value=1.4e-16 Score=159.46 Aligned_cols=218 Identities=17% Similarity=0.143 Sum_probs=132.4
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+.... .....+++..+.+..+++.-. ..+
T Consensus 4 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~l~-~~~ 73 (273)
T 1xkl_A 4 GKHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAA---SGTDLRKI----EELRTLYDYTLPLMELMESLS-ADE 73 (273)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTT---STTCCCCG----GGCCSHHHHHHHHHHHHHTSC-SSS
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCC---CCCCccCc----ccccCHHHHHHHHHHHHHHhc-cCC
Confidence 4779999997644 4568888899999999999999999 55542110 011245666665555555421 136
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhh---------hhccCCCCCCce--eeeccCCC-----------
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWC--YVESYGSK----------- 618 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~----------- 618 (715)
++.|+||||||.+++.+|.++|++++++|++++..... .+........|. ....+...
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 153 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCH
Confidence 89999999999999999999999999999988642100 000000000000 00000000
Q ss_pred -CC-CCCCCCCChhhHHHHH-hcCc-------------hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE
Q 005093 619 -GK-DSFTESPSVEDLTRFH-SKSP-------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 619 -~~-~~~~~~~~~~~~~~~~-~~sp-------------~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
.. ..+............. ...+ +......++|+|+++|++|..+|+..++.+.+.+. ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p----~~~ 229 (273)
T 1xkl_A 154 KFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG----VTE 229 (273)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHC----CSE
T ss_pred HHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCC----CCe
Confidence 00 0000000001000000 0000 00001135899999999999999888877777663 368
Q ss_pred EEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 683 VIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 683 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++++++||....+. ..++.+.|.+|+++.
T Consensus 230 ~~~i~~aGH~~~~e~-P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 230 AIEIKGADHMAMLCE-PQKLCASLLEIAHKY 259 (273)
T ss_dssp EEEETTCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCchhcC-HHHHHHHHHHHHHHh
Confidence 899999999876444 447888999999764
No 171
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.70 E-value=2.8e-17 Score=166.77 Aligned_cols=217 Identities=15% Similarity=0.127 Sum_probs=132.1
Q ss_pred CcEEEEEcCCC-CCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 481 DPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 481 ~P~vv~iHGg~-~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
.|.||++||.+ .......|...+..|++. |.|+++|+|| +|.+. . . ......++..+.+..+++.- ..
T Consensus 36 g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~-~---~-~~~~~~~~~~~dl~~~l~~l--~~ 104 (296)
T 1j1i_A 36 GQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLG---FGKTA-K---P-DIEYTQDRRIRHLHDFIKAM--NF 104 (296)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTT---STTSC-C---C-SSCCCHHHHHHHHHHHHHHS--CC
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCC---CCCCC-C---C-CCCCCHHHHHHHHHHHHHhc--CC
Confidence 46799999964 222234566677778665 9999999999 55543 1 1 11223555555555555442 23
Q ss_pred -ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-CCC----CCceeeeccCCCCCCCCCCCCChhh--
Q 005093 560 -SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-TDI----PDWCYVESYGSKGKDSFTESPSVED-- 631 (715)
Q Consensus 560 -~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-- 631 (715)
+++.|+||||||.+++.+|.++|++++++|+++|.......... ... +.......+....... ........
T Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 183 (296)
T 1j1i_A 105 DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTND-GFKIDDAMIN 183 (296)
T ss_dssp SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHSCT-TCCCCHHHHH
T ss_pred CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHHHHhccC-cccccHHHHH
Confidence 68999999999999999999999999999999886421100000 000 0000000000000000 00000000
Q ss_pred -----------HHHHH-----------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCC
Q 005093 632 -----------LTRFH-----------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 689 (715)
Q Consensus 632 -----------~~~~~-----------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~ 689 (715)
...+. .......+.++++|+|+++|++|..+|++.+..+.+.+. ..++++++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~ 259 (296)
T 1j1i_A 184 SRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID----DSWGYIIPHC 259 (296)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT----TEEEEEESSC
T ss_pred HHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCC----CCEEEEECCC
Confidence 00000 011223467889999999999999999888877766553 4789999999
Q ss_pred CccCCCCCchHHHHHHHHHHHHHhc
Q 005093 690 VHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 690 ~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
||....+ ...++.+.|.+||.+.+
T Consensus 260 gH~~~~e-~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 260 GHWAMIE-HPEDFANATLSFLSLRV 283 (296)
T ss_dssp CSCHHHH-SHHHHHHHHHHHHHHC-
T ss_pred CCCchhc-CHHHHHHHHHHHHhccC
Confidence 9976543 35578889999998754
No 172
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.70 E-value=2.7e-16 Score=174.49 Aligned_cols=232 Identities=16% Similarity=0.182 Sum_probs=143.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|.+++.... ++.|+||++||++.. ...|...+..|+++||.|+++|+|| +|.+.. +......
T Consensus 245 ~dg~~l~~~~~--------g~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~D~~G---~G~S~~---~~~~~~~ 308 (555)
T 3i28_A 245 KPRVRLHFVEL--------GSGPAVCLCHGFPES--WYSWRYQIPALAQAGYRVLAMDMKG---YGESSA---PPEIEEY 308 (555)
T ss_dssp ETTEEEEEEEE--------CSSSEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTSCC---CSCGGGG
T ss_pred CCCcEEEEEEc--------CCCCEEEEEeCCCCc--hhHHHHHHHHHHhCCCEEEEecCCC---CCCCCC---CCCcccc
Confidence 36777764332 245899999997655 4577888999999999999999999 554432 1111222
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhh-------------------
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM------------------- 600 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~------------------- 600 (715)
..+++.+.+..+++. ++.++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 309 ~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 309 CMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp SHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 345555544444443 24578999999999999999999999999999998875321000
Q ss_pred ----------------------ccCCCC--CCceee----ec-cCCCCCCCCCCCCChhhHHHHH---------------
Q 005093 601 ----------------------VGTTDI--PDWCYV----ES-YGSKGKDSFTESPSVEDLTRFH--------------- 636 (715)
Q Consensus 601 ----------------------~~~~~~--~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~--------------- 636 (715)
...... ...... .. ....................+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (555)
T 3i28_A 387 FQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY 466 (555)
T ss_dssp HHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT
T ss_pred hhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHH
Confidence 000000 000000 00 0000000000000111111110
Q ss_pred -------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHH
Q 005093 637 -------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLW 709 (715)
Q Consensus 637 -------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~w 709 (715)
..+....+.++++|+|+++|++|..+|++.+..+.+.+. .+++++++++||.... +...++.+.|.+|
T Consensus 467 ~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f 541 (555)
T 3i28_A 467 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGHWTQM-DKPTEVNQILIKW 541 (555)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCSCHHH-HSHHHHHHHHHHH
T ss_pred HhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeCCCCCCcch-hCHHHHHHHHHHH
Confidence 012223456889999999999999999888777666553 4789999999997654 3345788899999
Q ss_pred HHHhc
Q 005093 710 FKKYC 714 (715)
Q Consensus 710 l~~~l 714 (715)
|++..
T Consensus 542 l~~~~ 546 (555)
T 3i28_A 542 LDSDA 546 (555)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 98764
No 173
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=1.8e-15 Score=152.64 Aligned_cols=229 Identities=13% Similarity=0.117 Sum_probs=161.3
Q ss_pred CeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCC
Q 005093 68 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 146 (715)
Q Consensus 68 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (715)
..++..+ .+++...+......+ ..++|||||++|++..
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v----------~~~~~spdg~~l~~~~------------------------------- 60 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELF----------EAPNWSPDGKYLLLNS------------------------------- 60 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCC----------EEEEECTTSSEEEEEE-------------------------------
T ss_pred eeEEEEeCCCCceeeeccCCcce----------EeeEECCCCCEEEEEc-------------------------------
Confidence 3455555 566666665544343 7999999999999852
Q ss_pred cccCCcCcccCCccCceEEEEEccC-CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCce
Q 005093 147 DWEEDWGETYAGKRQPSLFVININS-GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 225 (715)
Q Consensus 147 ~~~~~~g~~~~~~~~~~l~~~~~~~-g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~ 225 (715)
...|++||+++ ++...+........+..+.|||||+. |++.....+ ....
T Consensus 61 --------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~~~-----------~~~~ 111 (297)
T 2ojh_A 61 --------------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL----YAISDKVEF-----------GKSA 111 (297)
T ss_dssp --------------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE----EEEEECTTT-----------SSCE
T ss_pred --------------CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE----EEEEEeCCC-----------Ccce
Confidence 15699999999 88877731122245678999999998 888763221 2357
Q ss_pred EEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 226 LYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 226 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
||.+++ .++..+.++.... ...+.|||||++|+|....+ ....||.+++.++..
T Consensus 112 l~~~~~-----------------~~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~--------~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 112 IYLLPS-----------------TGGTPRLMTKNLP-SYWHGWSPDGKSFTYCGIRD--------QVFDIYSMDIDSGVE 165 (297)
T ss_dssp EEEEET-----------------TCCCCEECCSSSS-EEEEEECTTSSEEEEEEEET--------TEEEEEEEETTTCCE
T ss_pred EEEEEC-----------------CCCceEEeecCCC-ccceEECCCCCEEEEEECCC--------CceEEEEEECCCCcc
Confidence 999997 6677777765544 67789999999999887653 134688888876554
Q ss_pred CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEe
Q 005093 306 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLT 385 (715)
Q Consensus 306 ~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s 385 (715)
+.+.... ..+..+.|+|||+.+++.....+...||.+++.++....+...........|+
T Consensus 166 ~~~~~~~--------------------~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s 225 (297)
T 2ojh_A 166 TRLTHGE--------------------GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPS 225 (297)
T ss_dssp EECCCSS--------------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEEC
T ss_pred eEcccCC--------------------CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEEC
Confidence 4333211 12345679999998888877677889999999888888887655444456789
Q ss_pred ecCCEEEEEEeCCC-------CCCeEEEEeeccc
Q 005093 386 LDGDNIIAVSSSPV-------DVPQVKYGYFVDK 412 (715)
Q Consensus 386 ~~~~~l~~~~~~~~-------~p~~l~~~~~~~~ 412 (715)
++++.|++...... ....|++.++.++
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 99999888776543 2256888886544
No 174
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.70 E-value=1.7e-16 Score=160.00 Aligned_cols=231 Identities=15% Similarity=0.231 Sum_probs=132.0
Q ss_pred cCCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCC
Q 005093 458 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 458 ~~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~ 537 (715)
...+|..++...+-+.+ +.|.||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+... ....
T Consensus 11 ~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~---~~~~ 76 (285)
T 3bwx_A 11 TSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRN--ARDFEDLATRLAG-DWRVLCPEMRG---RGDSDYA---KDPM 76 (285)
T ss_dssp ECTTSCEEEEEEECBCT-----TSCCEEEECCTTCC--GGGGHHHHHHHBB-TBCEEEECCTT---BTTSCCC---SSGG
T ss_pred ecCCCceEEEEEcCCCC-----CCCcEEEECCCCcc--hhhHHHHHHHhhc-CCEEEeecCCC---CCCCCCC---CCcc
Confidence 34577888876664431 25679999996654 5678888888876 99999999999 5554321 1111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCC--cchhhh------hccCC-CCCC
Q 005093 538 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP--LCNLAL------MVGTT-DIPD 608 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~--~~~~~~------~~~~~-~~~~ 608 (715)
...+++..+.+..+++. ...+++.|+||||||.+++.+|.++|++++++|+.++ ...... ..... ....
T Consensus 77 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 77 TYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFET 154 (285)
T ss_dssp GCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESS
T ss_pred ccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCccccc
Confidence 22344444333333333 1346899999999999999999999999999998653 211100 00000 0000
Q ss_pred ceee-eccCCCCCCCCCCCCChhhHHH-------------------------HHh-------cCchhhccCC-CCcEEEE
Q 005093 609 WCYV-ESYGSKGKDSFTESPSVEDLTR-------------------------FHS-------KSPISHISKV-KTPTIFL 654 (715)
Q Consensus 609 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~-------~sp~~~~~~i-~~P~Lii 654 (715)
|... ..+.......+.... ...... +.. .+....+.++ ++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 233 (285)
T 3bwx_A 155 WMHAARALQESSGDVYPDWD-ITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVL 233 (285)
T ss_dssp HHHHHHHHHHHHTTTSTTCC-HHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHHhhhhcccccC-hHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEE
Confidence 0000 000000000000000 000000 000 0000112233 6999999
Q ss_pred eeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 655 LGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 655 ~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+|++|..++++.+..+ .+. ..+++++++++||....++. . .+..|.+||++
T Consensus 234 ~G~~D~~~~~~~~~~~----~~~-~~~~~~~i~~~gH~~~~e~p-~-~~~~i~~fl~~ 284 (285)
T 3bwx_A 234 RGETSDILSAQTAAKM----ASR-PGVELVTLPRIGHAPTLDEP-E-SIAAIGRLLER 284 (285)
T ss_dssp EETTCSSSCHHHHHHH----HTS-TTEEEEEETTCCSCCCSCSH-H-HHHHHHHHHTT
T ss_pred EeCCCCccCHHHHHHH----HhC-CCcEEEEeCCCCccchhhCc-h-HHHHHHHHHHh
Confidence 9999999987765544 344 56899999999998665443 2 34678999864
No 175
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.70 E-value=5.6e-16 Score=159.63 Aligned_cols=237 Identities=19% Similarity=0.267 Sum_probs=136.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++.... + +.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+..... .......
T Consensus 19 ~g~~l~y~~~------G--~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~~-~~~~~~~ 84 (328)
T 2cjp_A 19 NGLNMHLAEL------G--EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRG---YGDTTGAPL-NDPSKFS 84 (328)
T ss_dssp TTEEEEEEEE------C--SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTCBCCCT-TCGGGGS
T ss_pred CCcEEEEEEc------C--CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCC---CCCCCCcCc-CCccccc
Confidence 5666654432 1 24789999997654 5678888899999999999999999 555532100 1111223
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch-------hh----hhccC------
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-------LA----LMVGT------ 603 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~-------~~----~~~~~------ 603 (715)
++++.+.+..+++.-..+.+++.|+||||||.+++.+|.++|++++++|++++... .. .....
T Consensus 85 ~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (328)
T 2cjp_A 85 ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISR 164 (328)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHHh
Confidence 44444444333333111257899999999999999999999999999999875421 00 00000
Q ss_pred CCCCCc--------e---ee-eccC---C-----CCCCCCCCC-------C---ChhhHHHHH----------------h
Q 005093 604 TDIPDW--------C---YV-ESYG---S-----KGKDSFTES-------P---SVEDLTRFH----------------S 637 (715)
Q Consensus 604 ~~~~~~--------~---~~-~~~~---~-----~~~~~~~~~-------~---~~~~~~~~~----------------~ 637 (715)
...+.. . .. ..+. . .....+... + .....+.+. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (328)
T 2cjp_A 165 FQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRA 244 (328)
T ss_dssp TSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHT
T ss_pred hhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHh
Confidence 000000 0 00 0000 0 000000000 0 011111100 0
Q ss_pred cC------chhhccCCCCcEEEEeeCCCCcCCchHHHHHH--HHHHHcCCcE-EEEEeCCCCccCCCCCchHHHHHHHHH
Q 005093 638 KS------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYA--RALREKGVET-KVIVFPNDVHGIERPQSDFESFLNIGL 708 (715)
Q Consensus 638 ~s------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~--~~l~~~g~~~-~~~~~~~~~H~~~~~~~~~~~~~~i~~ 708 (715)
.. ....+.++++|+|+++|++|..+|+..+.++. +.+.+.-... ++++++++||....+. ..++.+.|.+
T Consensus 245 ~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~ 323 (328)
T 2cjp_A 245 LPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQER-PHEISKHIYD 323 (328)
T ss_dssp HHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHS-HHHHHHHHHH
T ss_pred cccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhC-HHHHHHHHHH
Confidence 00 00134678999999999999999876543333 3444443445 7889999999866443 5678889999
Q ss_pred HHHH
Q 005093 709 WFKK 712 (715)
Q Consensus 709 wl~~ 712 (715)
||++
T Consensus 324 fl~~ 327 (328)
T 2cjp_A 324 FIQK 327 (328)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9864
No 176
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.70 E-value=6.4e-17 Score=161.55 Aligned_cols=213 Identities=16% Similarity=0.192 Sum_probs=131.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|++. |.|+++|+|| +|.+.... .. ...++++.+.+..+++. ...+
T Consensus 16 g~~vvllHG~~~~--~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~~~~---~~-~~~~~~~~~dl~~~l~~--l~~~ 83 (269)
T 2xmz_A 16 NQVLVFLHGFLSD--SRTYHNHIEKFTDN-YHVITIDLPG---HGEDQSSM---DE-TWNFDYITTLLDRILDK--YKDK 83 (269)
T ss_dssp SEEEEEECCTTCC--GGGGTTTHHHHHTT-SEEEEECCTT---STTCCCCT---TS-CCCHHHHHHHHHHHHGG--GTTS
T ss_pred CCeEEEEcCCCCc--HHHHHHHHHHHhhc-CeEEEecCCC---CCCCCCCC---CC-ccCHHHHHHHHHHHHHH--cCCC
Confidence 3569999997655 45677778888765 9999999999 55553211 10 23466666666666655 3457
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc-------CCC----C--CCce-eeeccCCCCCCCCCC-
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-------TTD----I--PDWC-YVESYGSKGKDSFTE- 625 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-------~~~----~--~~~~-~~~~~~~~~~~~~~~- 625 (715)
++.|+||||||.+++.+|.++|++++++|++++......... ... . .... +...+... ..+..
T Consensus 84 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 161 (269)
T 2xmz_A 84 SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKL--PLFQSQ 161 (269)
T ss_dssp EEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--GGGGGG
T ss_pred cEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhC--cccccc
Confidence 899999999999999999999999999999987543210000 000 0 0000 00000000 00000
Q ss_pred --CC--------------Chhh-HHHHH------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE
Q 005093 626 --SP--------------SVED-LTRFH------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 626 --~~--------------~~~~-~~~~~------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
.. .... ...+. ..+....+.++++|+|+++|++|..++..... +.+. -..++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~----~~~~~ 236 (269)
T 2xmz_A 162 LELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANL----IPNSK 236 (269)
T ss_dssp GGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHH----STTEE
T ss_pred ccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhh----CCCcE
Confidence 00 0000 00010 01112356788999999999999998765532 4333 34589
Q ss_pred EEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 683 VIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 683 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++++++||....+ ...++.+.|.+|+++.
T Consensus 237 ~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 237 CKLISATGHTIHVE-DSDEFDTMILGFLKEE 266 (269)
T ss_dssp EEEETTCCSCHHHH-SHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCChhhc-CHHHHHHHHHHHHHHh
Confidence 99999999987654 3457888999999764
No 177
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.70 E-value=9.7e-17 Score=164.33 Aligned_cols=229 Identities=15% Similarity=0.191 Sum_probs=138.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++....- .++.|.||++||.+.+ ...|...+..|++. |.|+++|+|| ||.+.. + .....
T Consensus 15 ~g~~l~y~~~G------~g~~~pvvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~---~--~~~~~ 77 (316)
T 3afi_E 15 LGSSMAYRETG------AQDAPVVLFLHGNPTS--SHIWRNILPLVSPV-AHCIAPDLIG---FGQSGK---P--DIAYR 77 (316)
T ss_dssp TTEEEEEEEES------CTTSCEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTT---STTSCC---C--SSCCC
T ss_pred CCEEEEEEEeC------CCCCCeEEEECCCCCc--hHHHHHHHHHHhhC-CEEEEECCCC---CCCCCC---C--CCCCC
Confidence 46666544331 1233589999997655 55788888888654 9999999999 666532 1 11234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch---hhhhc----------------
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN---LALMV---------------- 601 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~---~~~~~---------------- 601 (715)
+++..+.+..+++.- ..+++.|+||||||.+++.+|.++|++++++|++++... +....
T Consensus 78 ~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 3afi_E 78 FFDHVRYLDAFIEQR--GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARA 155 (316)
T ss_dssp HHHHHHHHHHHHHHT--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHH
Confidence 666666666666652 347899999999999999999999999999999876321 10000
Q ss_pred --cCCCCCCce--ee---eccCCCCCCC-CCCCCChhhHHHH----------------H-hcC--------------chh
Q 005093 602 --GTTDIPDWC--YV---ESYGSKGKDS-FTESPSVEDLTRF----------------H-SKS--------------PIS 642 (715)
Q Consensus 602 --~~~~~~~~~--~~---~~~~~~~~~~-~~~~~~~~~~~~~----------------~-~~s--------------p~~ 642 (715)
.....+... .. ..+....... .......+..+.+ . ... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T 3afi_E 156 VFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHA 235 (316)
T ss_dssp HHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHH
T ss_pred HHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHH
Confidence 000000000 00 0000000000 0000000000000 0 000 011
Q ss_pred hccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 643 HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 643 ~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.+.++++|+|+++|++|..+|++.+..+.+.+ ...++++++++||....+ ...++.+.|.+||++.
T Consensus 236 ~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~~~e-~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 236 ALAASSYPKLLFTGEPGALVSPEFAERFAASL----TRCALIRLGAGLHYLQED-HADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----SSEEEEEEEEECSCHHHH-HHHHHHHHHHHHHHHH
T ss_pred hhhccCCCeEEEecCCCCccCHHHHHHHHHhC----CCCeEEEcCCCCCCchhh-CHHHHHHHHHHHHhhc
Confidence 23468999999999999999987776666555 347899999999986543 4557888999999764
No 178
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=8.2e-16 Score=183.64 Aligned_cols=156 Identities=10% Similarity=0.010 Sum_probs=115.7
Q ss_pred ccceEEEe-cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc-c
Q 005093 185 SVGQVVWA-PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-S 262 (715)
Q Consensus 185 ~~~~~~~s-pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-~ 262 (715)
.+..++|| |||+. |++... ..|+++++ .++....++.... .
T Consensus 297 ~v~~~~~S~pdG~~----la~~~~----------------~~i~~~~~-----------------~~~~~~~~~~~~~~~ 339 (1045)
T 1k32_A 297 SKFAEDFSPLDGDL----IAFVSR----------------GQAFIQDV-----------------SGTYVLKVPEPLRIR 339 (1045)
T ss_dssp GGGEEEEEECGGGC----EEEEET----------------TEEEEECT-----------------TSSBEEECSCCSCEE
T ss_pred ccceeeecCCCCCE----EEEEEc----------------CEEEEEcC-----------------CCCceEEccCCCcce
Confidence 46789999 99999 998761 26899997 6777777877766 7
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeE-eeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLH-RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~-~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
...++|| ||+.|+|.+.+ .+|| ++++.++..+.++... ..+..++|+
T Consensus 340 ~~~~~~s-dg~~l~~~s~~-----------~~l~~~~d~~~~~~~~l~~~~--------------------~~~~~~~~S 387 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTRE-----------GDFLGIYDYRTGKAEKFEENL--------------------GNVFAMGVD 387 (1045)
T ss_dssp EEEECSS-SEEEEEEEETT-----------EEEEEEEETTTCCEEECCCCC--------------------CSEEEEEEC
T ss_pred EEeeeEc-CCCeEEEEECC-----------CceEEEEECCCCCceEecCCc--------------------cceeeeEEC
Confidence 8899999 99999998862 3688 8998876654444111 023456799
Q ss_pred cCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEEeCC------CCCCeEEEEeeccc
Q 005093 342 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSP------VDVPQVKYGYFVDK 412 (715)
Q Consensus 342 ~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~~------~~p~~l~~~~~~~~ 412 (715)
|||+.|++.... ..|+.+|+++|+.+.+.. ....+....||+||+.|++..... ..+..|++.++.++
T Consensus 388 pDG~~la~~~~~---~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 388 RNGKFAVVANDR---FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp TTSSEEEEEETT---SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCCEEEEECCC---CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 999988776542 389999999999988873 333445578999999998877643 44567888887644
No 179
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.69 E-value=2e-16 Score=165.00 Aligned_cols=121 Identities=21% Similarity=0.320 Sum_probs=88.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++....-|+ .+..|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+.. +.......
T Consensus 11 ~g~~l~y~~~G~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~g---~g~s~~---~~~~~~~~ 78 (356)
T 2e3j_A 11 RGTRIHAVADSPP----DQQGPLVVLLHGFPES--WYSWRHQIPALAGAGYRVVAIDQRG---YGRSSK---YRVQKAYR 78 (356)
T ss_dssp TTEEEEEEEECCT----TCCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCC---CCSGGGGS
T ss_pred CCeEEEEEEecCC----CCCCCEEEEECCCCCc--HHHHHHHHHHHHHcCCEEEEEcCCC---CCCCCC---CCcccccC
Confidence 6778877666553 2346899999997654 4567778888999999999999999 554421 11111223
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
..++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|++++..
T Consensus 79 ~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 79 IKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 55555555555544 345789999999999999999999999999999988654
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=8.4e-16 Score=175.81 Aligned_cols=270 Identities=9% Similarity=0.103 Sum_probs=168.4
Q ss_pred eeCCCCceEEEEecCCCC-CCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCcc
Q 005093 49 VPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 126 (715)
Q Consensus 49 ~~Spdg~~la~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 126 (715)
.++|||++++|+.+.++. ...+|.+. .+++.+.+++......+. ...+..++|||||++|||.....
T Consensus 78 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDg~~la~~~~~~-------- 146 (710)
T 2xdw_A 78 CHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDG---TVALRGYAFSEDGEYFAYGLSAS-------- 146 (710)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTS---CEEEEEEEECTTSSEEEEEEEET--------
T ss_pred CCEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCC---CEEEEEEEECCCCCEEEEEEcCC--------
Confidence 345999999999876532 34678777 566666666542211000 01236899999999999987653
Q ss_pred CCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEe
Q 005093 127 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
|. ...+|+++|+++|+...+ +........++|||||+. |+|++
T Consensus 147 --------------------------G~-----~~~~i~v~d~~tg~~~~~--~~~~~~~~~~~wspDg~~----l~~~~ 189 (710)
T 2xdw_A 147 --------------------------GS-----DWVTIKFMKVDGAKELPD--VLERVKFSCMAWTHDGKG----MFYNA 189 (710)
T ss_dssp --------------------------TC-----SCEEEEEEETTTTEEEEE--EEEEECSCCEEECTTSSE----EEEEE
T ss_pred --------------------------CC-----ceEEEEEEECCCCCCCcc--cccCcccceEEEEeCCCE----EEEEE
Confidence 11 235899999999998775 222223567999999999 99987
Q ss_pred ecCccc-eeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce--ecCCC---CccccceeEcCCCCeEEEEec
Q 005093 207 WSSETR-KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV--NLTES---ISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 207 ~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~lt~~---~~~~~~~~~spdg~~l~~~~~ 280 (715)
...... ..+-.....+..+||++++ .++... .+... ......+.|||||++|++.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~~~l-----------------~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 190 YPQQDGKSDGTETSTNLHQKLYYHVL-----------------GTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ECCccccccccccccCCCCEEEEEEC-----------------CCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 543210 0000011123457999997 554422 22222 233568999999999999987
Q ss_pred CCCCCCCCccccceeEeeecCC------CC--CCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 281 KSSVDSGAHSATDSLHRIDWPT------NG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~------~~--~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+.. ....+||++|+.+ +. .+.++... + .....|++||+.|++.+.
T Consensus 253 ~~~------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-----------~----------~~~~~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 253 EGC------DPVNRLWYCDLQQESNGITGILKWVKLIDNF-----------E----------GEYDYVTNEGTVFTFKTN 305 (710)
T ss_dssp CSS------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-----------S----------SCEEEEEEETTEEEEEEC
T ss_pred ccC------CCccEEEEEECcccccccCCccceEEeeCCC-----------C----------cEEEEEeccCCEEEEEEC
Confidence 531 1146799999876 32 22222111 0 112258899999999887
Q ss_pred eCC-eeEEEEEECCCCc---EEEecCCCC--CceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 353 WGS-SQVIISVNVSSGE---LLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 353 ~~~-~~~l~~~d~~tg~---~~~l~~~~~--~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
..+ ..+|+.+|++++. .+.++.... .+....++ +++.++++.... .-.+|+++++.++
T Consensus 306 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~-g~~~l~~~~~~~g 369 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHD-VKNTLQLHDLATG 369 (710)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEET-TEEEEEEEETTTC
T ss_pred CCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEEC-CEEEEEEEECCCC
Confidence 543 6789999998874 366665543 22223343 467777666543 3456787776433
No 181
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.69 E-value=2.6e-17 Score=171.65 Aligned_cols=222 Identities=11% Similarity=0.106 Sum_probs=131.6
Q ss_pred CCCcEEEEEcCCCCCCCC---ccch-----------HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcC--C---CCCC-c
Q 005093 479 SCDPLIVVLHGGPHSVSL---SSYS-----------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL--P---GKVG-S 538 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~---~~~~-----------~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~--~---~~~~-~ 538 (715)
++.|+||++||++..... ..|. ..++.|+++||.|+++|+|| +|.+..... . ..+. .
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~~~~~~~~~~~~~ 124 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRT---HYVPPFLKDRQLSFTANWGWS 124 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGG---GGCCTTCCGGGGGGGTTCSHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCC---CCCCCcccccccccccCCcHH
Confidence 356899999997655210 0222 67888999999999999999 444321100 0 0111 1
Q ss_pred cchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhhhhccCC---CCC-------
Q 005093 539 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT---DIP------- 607 (715)
Q Consensus 539 ~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~~~~~~~---~~~------- 607 (715)
..++|+.++++++.++ .+.++++++|||+||.+++.++.++ |++++++|++++........... ...
T Consensus 125 ~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
T 2rau_A 125 TWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEA 202 (354)
T ss_dssp HHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhh
Confidence 2257888888888776 3457899999999999999999998 99999999986542210000000 000
Q ss_pred ----------Cce----eeeccCCC-----------------------CCCCCC-CCCChhhH-HHHH------------
Q 005093 608 ----------DWC----YVESYGSK-----------------------GKDSFT-ESPSVEDL-TRFH------------ 636 (715)
Q Consensus 608 ----------~~~----~~~~~~~~-----------------------~~~~~~-~~~~~~~~-~~~~------------ 636 (715)
.+. ....+... ....+. ........ ..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (354)
T 2rau_A 203 KGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSL 282 (354)
T ss_dssp HTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHH
T ss_pred hcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhcccccccccc
Confidence 000 00000000 000000 00000111 1111
Q ss_pred hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC--CCchHHHHHHHHHHHHHh
Q 005093 637 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER--PQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 637 ~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~wl~~~ 713 (715)
..+....+.++++|+|+++|++|.++|.. +. .+ ....++++++++||.... ++...++.+.+.+||+++
T Consensus 283 ~~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~~----~l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 283 ERDLKFDYEGILVPTIAFVSERFGIQIFD-SK----IL---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp TTTCCCCCTTCCCCEEEEEETTTHHHHBC-GG----GS---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred CcccccccccCCCCEEEEecCCCCCCccc-hh----hh---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 11223345688999999999999876632 21 22 235789999999997643 344578899999999875
No 182
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.69 E-value=3.4e-16 Score=157.22 Aligned_cols=237 Identities=13% Similarity=0.063 Sum_probs=143.1
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCC--CC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG--KV 536 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~--~~ 536 (715)
+.++..+ .|+.+ + |+||++||++.......|.. ..+.+++.|+.|+++|.++...+.. +...... ..
T Consensus 17 ~~~~~v~--~~p~~---~--~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~-~~~~~~~~g~~ 88 (280)
T 1dqz_A 17 GRDIKVQ--FQGGG---P--HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTD-WYQPSQSNGQN 88 (280)
T ss_dssp TEEEEEE--EECCS---S--SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSB-CSSSCTTTTCC
T ss_pred CceeEEE--EcCCC---C--CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccC-CCCCCcccccc
Confidence 4556544 45433 2 58999999753112334443 2356778899999999876433321 1000000 00
Q ss_pred CccchhhH--HHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeec
Q 005093 537 GSQDVNDV--LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 614 (715)
Q Consensus 537 ~~~~~~d~--~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (715)
......+. .+++.++.++..+++++++|+|+||||++++.++.++|++|+++++++|..+............ ....
T Consensus 89 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~--~~~~ 166 (280)
T 1dqz_A 89 YTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGL--AMND 166 (280)
T ss_dssp SCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHH--HHHH
T ss_pred ccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhhHHH--Hhhh
Confidence 11223332 2344455443346677999999999999999999999999999999999875432100000000 0000
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhcCchhhccCC---CCcEEEEeeCCCC--------------cCCchHHHHHHHHHHHc
Q 005093 615 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYARALREK 677 (715)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~G~~D~--------------~v~~~~~~~~~~~l~~~ 677 (715)
........+.+.+. ...+...+|...+.++ .+|+++.+|+.|. .++..++++++++|+++
T Consensus 167 ~~~~~~~~~~g~~~---~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~ 243 (280)
T 1dqz_A 167 SGGYNANSMWGPSS---DPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAAD 243 (280)
T ss_dssp TTSCCHHHHHCSTT---SHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCcCHHHhcCCCC---chhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhC
Confidence 00000000001111 1345566776555544 5899999999997 56778899999999999
Q ss_pred C-CcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 678 G-VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 678 g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
| .++++.++++++|.+.. ....+...+.||.+.|
T Consensus 244 g~~~~~~~~~~~g~H~~~~---w~~~l~~~l~~l~~~l 278 (280)
T 1dqz_A 244 GGRNGVFNFPPNGTHSWPY---WNEQLVAMKADIQHVL 278 (280)
T ss_dssp TCCSEEEECCSCCCSSHHH---HHHHHHHTHHHHHHHH
T ss_pred CCCceEEEecCCCccChHH---HHHHHHHHHHHHHHHh
Confidence 9 99999999888997632 2345567777877655
No 183
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.69 E-value=1.6e-16 Score=157.44 Aligned_cols=218 Identities=14% Similarity=0.062 Sum_probs=131.1
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+.... .....+++..+.+..+++.-. ..+
T Consensus 3 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~l~-~~~ 72 (257)
T 3c6x_A 3 FAHFVLIHTICHG--AWIWHKLKPLLEALGHKVTALDLAA---SGVDPRQI----EEIGSFDEYSEPLLTFLEALP-PGE 72 (257)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHTHHHHHHHHTSC-TTC
T ss_pred CCcEEEEcCCccC--cCCHHHHHHHHHhCCCEEEEeCCCC---CCCCCCCc----ccccCHHHHHHHHHHHHHhcc-ccC
Confidence 3679999996644 5568888999999999999999999 55542110 011235555555555555421 236
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchh-----h----hhcc-CCCC-CCce-eee---------ccCCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-----A----LMVG-TTDI-PDWC-YVE---------SYGSKG 619 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~-----~----~~~~-~~~~-~~~~-~~~---------~~~~~~ 619 (715)
++.|+||||||.+++.++.++|++++++|++++.... . .... .... ..+. ... ......
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTL 152 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred CeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHH
Confidence 8999999999999999999999999999988764210 0 0000 0000 0000 000 000000
Q ss_pred C-CCCCCCCChhhHHHHH-hcCc-------------hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEE
Q 005093 620 K-DSFTESPSVEDLTRFH-SKSP-------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 684 (715)
Q Consensus 620 ~-~~~~~~~~~~~~~~~~-~~sp-------------~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 684 (715)
. ..+............. ...+ .......++|+|+++|++|..+|++.++.+.+.+. ..+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~----~~~~~ 228 (257)
T 3c6x_A 153 LRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK----PDKVY 228 (257)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC----CSEEE
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCC----CCeEE
Confidence 0 0000001111111110 0001 00001125899999999999999888777766653 46899
Q ss_pred EeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 685 VFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 685 ~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++++||....+. ..++.+.+.+|++++
T Consensus 229 ~i~~~gH~~~~e~-P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 229 KVEGGDHKLQLTK-TKEIAEILQEVADTY 256 (257)
T ss_dssp ECCSCCSCHHHHS-HHHHHHHHHHHHHHC
T ss_pred EeCCCCCCcccCC-HHHHHHHHHHHHHhc
Confidence 9999999876443 457888899998764
No 184
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.68 E-value=7.7e-16 Score=157.68 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=79.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++....-+ ...|.||++||++.......+ ...+...||.|+++|+|| +|.+... .......
T Consensus 23 ~g~~l~~~~~g~------~~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~ 87 (317)
T 1wm1_A 23 DGHRIYWELSGN------PNGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRG---CGRSRPH---ASLDNNT 87 (317)
T ss_dssp SSCEEEEEEEEC------TTSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTT---STTCBST---TCCTTCS
T ss_pred CCcEEEEEEcCC------CCCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCC---CCCCCCC---ccccccc
Confidence 566665433322 134669999997654322222 233445799999999999 6655311 1111234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
..++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|++++..
T Consensus 88 ~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 140 (317)
T 1wm1_A 88 TWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 140 (317)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCC
Confidence 55666666666665 345789999999999999999999999999999987643
No 185
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.68 E-value=5.6e-16 Score=144.48 Aligned_cols=169 Identities=16% Similarity=0.102 Sum_probs=123.4
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCc---EEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~---~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
.|.||++||.+.. ...|...+..|+++|| .|+++|++|.+. +.. ...+++.+.+..+.+. .
T Consensus 3 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~---s~~---------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWDKTG---TNY---------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEECCCSCTTC---CHH---------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCC--HhHHHHHHHHHHHcCCCCccEEEEecCCCCC---chh---------hhHHHHHHHHHHHHHH--c
Confidence 5779999996654 5578888899999998 699999999433 221 1355666666666655 2
Q ss_pred CCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHH
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRF 635 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (715)
+.+++.++||||||.+++.++.++ |++++++|+++|....... .. + +.
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------~~--------~---~~------- 116 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------KA--------L---PG------- 116 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------BC--------C---CC-------
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------cc--------C---CC-------
Confidence 457899999999999999999987 8899999999987543210 00 0 00
Q ss_pred HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 636 HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 636 ~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.. ...++|+|+++|++|.++|++.+. -...+++++++++|.+.... . ++.+.+.+||++.
T Consensus 117 --~~-----~~~~~p~l~i~G~~D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~~-~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 117 --TD-----PNQKILYTSIYSSADMIVMNYLSR---------LDGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNGG 176 (181)
T ss_dssp --SC-----TTCCCEEEEEEETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTTT
T ss_pred --CC-----CccCCcEEEEecCCCccccccccc---------CCCCcceeeccCchHhhccC-H-HHHHHHHHHHhcc
Confidence 00 123479999999999999977431 23468899999999876554 3 6889999999763
No 186
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.68 E-value=1.1e-15 Score=144.00 Aligned_cols=171 Identities=12% Similarity=0.129 Sum_probs=121.8
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
+.|.||++||.+.... ..|...+..+...+ +.++++| ++ ....+++.+.+..+.+.. +
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~---~~v~~~~---~~------------~~~~~~~~~~~~~~~~~~--~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHW---QRIRQRE---WY------------QADLDRWVLAIRRELSVC--T- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTS---EECCCSC---CS------------SCCHHHHHHHHHHHHHTC--S-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCe---EEEeccC---CC------------CcCHHHHHHHHHHHHHhc--C-
Confidence 4688999999765431 34544444433344 4456666 21 123566666666666552 3
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKS 639 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 639 (715)
++++++|||+||.+++.++.++|++++++|+++|........ +.
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-------------------------~~----------- 117 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI-------------------------DD----------- 117 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC-------------------------TT-----------
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC-------------------------cc-----------
Confidence 789999999999999999999999999999999976532100 00
Q ss_pred chhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCC--CchHHHHHHHHHHHHHhc
Q 005093 640 PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 640 p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~wl~~~l 714 (715)
...+.++++|+|+++|++|..+|++.+..+.+.+ .++++++++++|..... ....+..+.+.+|+++..
T Consensus 118 -~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 118 -RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEILI 188 (191)
T ss_dssp -TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTTC
T ss_pred -ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHhc
Confidence 0335678899999999999999999988888776 37899999999987542 133456688999998653
No 187
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.68 E-value=4.1e-17 Score=163.34 Aligned_cols=219 Identities=16% Similarity=0.148 Sum_probs=130.1
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
+.|+||++||.+.. ...|...+..|.++||.|+++|+|| +|.+... .........+++.+.+..+++. .+.
T Consensus 23 ~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~ 93 (279)
T 4g9e_A 23 EGAPLLMIHGNSSS--GAIFAPQLEGEIGKKWRVIAPDLPG---HGKSTDA--IDPDRSYSMEGYADAMTEVMQQ--LGI 93 (279)
T ss_dssp CEEEEEEECCTTCC--GGGGHHHHHSHHHHHEEEEEECCTT---STTSCCC--SCHHHHSSHHHHHHHHHHHHHH--HTC
T ss_pred CCCeEEEECCCCCc--hhHHHHHHhHHHhcCCeEEeecCCC---CCCCCCC--CCcccCCCHHHHHHHHHHHHHH--hCC
Confidence 56889999997654 5567788888778899999999999 4443210 0011122356666666555554 244
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc--CCCCCCceee--eccCCC----CC-CCCCCCCChh
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG--TTDIPDWCYV--ESYGSK----GK-DSFTESPSVE 630 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~----~~-~~~~~~~~~~ 630 (715)
++++|+|||+||.+++.++.++|+ +.++|++++......... .......... ..+... .. ..+.......
T Consensus 94 ~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (279)
T 4g9e_A 94 ADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEAS 172 (279)
T ss_dssp CCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHH
T ss_pred CceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHH
Confidence 689999999999999999999998 666665554332111100 0000000000 000000 00 0000000000
Q ss_pred hHHHHH------------------hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHH-HHHHHcCCcEEEEEeCCCCc
Q 005093 631 DLTRFH------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA-RALREKGVETKVIVFPNDVH 691 (715)
Q Consensus 631 ~~~~~~------------------~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~-~~l~~~g~~~~~~~~~~~~H 691 (715)
....+. ..+....+.++++|+|+++|++|..+|++.+..+. +.+ ..+++++++++||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH 248 (279)
T 4g9e_A 173 LLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNL----WEGKTHVIDNAGH 248 (279)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSB----GGGSCEEETTCCS
T ss_pred HHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccC----CCCeEEEECCCCc
Confidence 001111 11222335678999999999999999987766554 222 2467889999999
Q ss_pred cCCCCCchHHHHHHHHHHHHHh
Q 005093 692 GIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
.... +...++.+.+.+||++.
T Consensus 249 ~~~~-~~p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 249 APFR-EAPAEFDAYLARFIRDC 269 (279)
T ss_dssp CHHH-HSHHHHHHHHHHHHHHH
T ss_pred chHH-hCHHHHHHHHHHHHHHh
Confidence 8653 34457888999999875
No 188
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.68 E-value=6e-17 Score=174.36 Aligned_cols=228 Identities=17% Similarity=0.215 Sum_probs=136.1
Q ss_pred CCcEEEEEcCCCCCCCCc-cchHHHH---HHHhCCcEEEEEcCCCCCCCchhhhhc-CCC--C---C----CccchhhHH
Q 005093 480 CDPLIVVLHGGPHSVSLS-SYSKSLA---FLSSVGYSLLIVNYRGSLGFGEEALQS-LPG--K---V----GSQDVNDVL 545 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~-~~~~~~~---~la~~G~~vi~~d~rG~~~~g~~~~~~-~~~--~---~----~~~~~~d~~ 545 (715)
..|+||++||.+...... .|...+. .|+++||.|+++|+||. ++|.+.... .+. . + ....++++.
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a 186 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS-PFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDV 186 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC-CCCCCCCCCCCcccccccccccccccccHHHHH
Confidence 468999999976654321 1554443 46688999999999994 123322100 000 0 1 123566777
Q ss_pred HHHHHHHHcCCCCCce-EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-------c--CCCCCCce-----
Q 005093 546 TAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-------G--TTDIPDWC----- 610 (715)
Q Consensus 546 ~~i~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-------~--~~~~~~~~----- 610 (715)
+.+..+++. ...++ ++|+||||||.+++.+|.++|++++++|++++........ . ....+.|.
T Consensus 187 ~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (444)
T 2vat_A 187 RIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYD 264 (444)
T ss_dssp HHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCC
T ss_pred HHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHHHhcCCcccccccc
Confidence 666666655 23467 9999999999999999999999999999998865321000 0 00000000
Q ss_pred -------------------------eeeccCCCCCC-----------------------CCCCCC--ChhhH--------
Q 005093 611 -------------------------YVESYGSKGKD-----------------------SFTESP--SVEDL-------- 632 (715)
Q Consensus 611 -------------------------~~~~~~~~~~~-----------------------~~~~~~--~~~~~-------- 632 (715)
+...+...... .+.... ..+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (444)
T 2vat_A 265 VDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKF 344 (444)
T ss_dssp TTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGHHHHHHHHHHHH
T ss_pred ccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchhhHHHHHHHHHHHH
Confidence 00000000000 000000 00000
Q ss_pred -------------HHHHhc--------CchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeC-CCC
Q 005093 633 -------------TRFHSK--------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDV 690 (715)
Q Consensus 633 -------------~~~~~~--------sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~-~~~ 690 (715)
..+... +....+.++++|+|+++|++|..+|++.+..+.+.+. .+++++++ ++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p----~~~~~~i~~~~G 420 (444)
T 2vat_A 345 AASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP----NSRLCVVDTNEG 420 (444)
T ss_dssp HHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST----TEEEEECCCSCG
T ss_pred hhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCC----CcEEEEeCCCCC
Confidence 000011 1344567899999999999999999988877777664 47899999 899
Q ss_pred ccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 691 HGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 691 H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
|.....+ ..++.+.|.+||+++++
T Consensus 421 H~~~~e~-p~~~~~~i~~fL~~~l~ 444 (444)
T 2vat_A 421 HDFFVME-ADKVNDAVRGFLDQSLM 444 (444)
T ss_dssp GGHHHHT-HHHHHHHHHHHHTC---
T ss_pred cchHHhC-HHHHHHHHHHHHHHhcC
Confidence 9866443 55788899999987763
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=4.1e-15 Score=157.30 Aligned_cols=268 Identities=12% Similarity=0.137 Sum_probs=158.6
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccce-EEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccc----
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGAS-AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTV---- 89 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---- 89 (715)
..||++|+.++ +..+++... .... .+.|||||++|||+...+ +++.+. .+++.++++......
T Consensus 60 ~~l~~~d~~~~--~~~~l~~~~-----~~~~~~~~~spdg~~l~~~~~~~----~l~~~d~~~~~~~~~~~~~~~~~~~g 128 (396)
T 3c5m_A 60 RNYYLLNLETQ--QAVQLTEGK-----GDNTFGGFISTDERAFFYVKNEL----NLMKVDLETLEEQVIYTVDEEWKGYG 128 (396)
T ss_dssp CEEEEEETTTT--EEEECCCSS-----CBCTTTCEECTTSSEEEEEETTT----EEEEEETTTCCEEEEEECCTTEEEEE
T ss_pred ceEEEEECCCC--cEEEeecCC-----CCccccceECCCCCEEEEEEcCC----cEEEEECCCCCcEEEEecccccCCCC
Confidence 46888766554 345554433 2222 378999999999998754 577666 555555555421110
Q ss_pred --------------------------------------ccccc--------------CCCcccceeecC-CCCeEEEEee
Q 005093 90 --------------------------------------HGSVY--------------ADGWFEGISWNS-DETLIAYVAE 116 (715)
Q Consensus 90 --------------------------------------~~~~~--------------~~~~~~~~~wSp-Dg~~la~~~~ 116 (715)
...++ ....+..+.||| ||++|+|.+.
T Consensus 129 ~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~ 208 (396)
T 3c5m_A 129 TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE 208 (396)
T ss_dssp EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC
T ss_pred CEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec
Confidence 00000 001234567888 7888888754
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
... . .....|+++++++++.+.+........+..+.|||||+
T Consensus 209 ~~~---------------------------------~-----~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 209 GPH---------------------------------D-----LVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp SCS---------------------------------S-----SCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSS
T ss_pred CCC---------------------------------C-----CCCceEEEEECCCCceeEeeccCCCccccceEECCCCC
Confidence 210 0 01257999999998888873111123466789999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcC-CCCeE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP-DGKFL 275 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~sp-dg~~l 275 (715)
. |+|.....+. ....|+++|+ .+++.+.++..... . +.||| ||+.|
T Consensus 251 ~----l~~~~~~~~~----------~~~~l~~~d~-----------------~~g~~~~l~~~~~~-~-~~~s~~dg~~l 297 (396)
T 3c5m_A 251 A----MAYVSYFKGQ----------TDRVIYKANP-----------------ETLENEEVMVMPPC-S-HLMSNFDGSLM 297 (396)
T ss_dssp C----EEEEEEETTT----------CCEEEEEECT-----------------TTCCEEEEEECCSE-E-EEEECSSSSEE
T ss_pred E----EEEEecCCCC----------ccceEEEEEC-----------------CCCCeEEeeeCCCC-C-CCccCCCCceE
Confidence 9 9998743221 1124999997 77777776644332 2 99999 99988
Q ss_pred EEEecCCCCCC---C--CccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEE
Q 005093 276 VFLSAKSSVDS---G--AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 350 (715)
Q Consensus 276 ~~~~~~~~~~~---g--~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~ 350 (715)
++.+....... + ......+||++|+.+++.+.++.....+ .... .+. ......+.|+|||+.|++.
T Consensus 298 ~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~-~~~~--~~~------~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 298 VGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSW-DVLD--GDR------QITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp EEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCC-CCBT--TBS------STTCCCCEECTTSSEEEEE
T ss_pred EEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcc-cccc--ccc------cCCCCCceEccCCCeEEEE
Confidence 77553210000 0 0013467999999887765554321100 0000 000 0013457899999999998
Q ss_pred eeeCCeeEEEEEECCCCcEEEecC
Q 005093 351 SIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 351 ~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
+...+...||.+++.+++.+.+..
T Consensus 369 s~~~~~~~l~~~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 369 SDFEGVPAIYIADVPESYKHLEHH 392 (396)
T ss_dssp ECTTSSCEEEEEECCTTCC-----
T ss_pred ecCCCCceEEEEEEcccccccccc
Confidence 887777899999998887765543
No 190
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.67 E-value=3.3e-16 Score=156.57 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=131.9
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+...... ......+++..+.+..+++. ++.+
T Consensus 20 ~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~~~~-~~~~~~~~~~a~dl~~~l~~--l~~~ 90 (271)
T 1wom_A 20 KASIMFAPGFGCD--QSVWNAVAPAFEE-DHRVILFDYVG---SGHSDLRAYD-LNRYQTLDGYAQDVLDVCEA--LDLK 90 (271)
T ss_dssp SSEEEEECCTTCC--GGGGTTTGGGGTT-TSEEEECCCSC---CSSSCCTTCC-TTGGGSHHHHHHHHHHHHHH--TTCS
T ss_pred CCcEEEEcCCCCc--hhhHHHHHHHHHh-cCeEEEECCCC---CCCCCCCccc-ccccccHHHHHHHHHHHHHH--cCCC
Confidence 3789999996544 4567777777765 79999999999 5554311100 01112345555544444444 2357
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc-cC-CCCCC--c-eeeeccCCC-------CCCCCCCC-C
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-GT-TDIPD--W-CYVESYGSK-------GKDSFTES-P 627 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-~~-~~~~~--~-~~~~~~~~~-------~~~~~~~~-~ 627 (715)
++.|+||||||.+++.+|.++|++++++|++++........ .. ..... . ......... ........ .
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPD 170 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTT
T ss_pred CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 89999999999999999999999999999998752110000 00 00000 0 000000000 00000000 0
Q ss_pred ChhhHHH----H---------------HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 628 SVEDLTR----F---------------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 628 ~~~~~~~----~---------------~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
.....+. + ...+....+.++++|+|+++|++|..+|.+.+..+.+.+. ..+++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 246 (271)
T 1wom_A 171 RPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP----YSSLKQMEA 246 (271)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS----SEEEEEEEE
T ss_pred chHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC----CCEEEEeCC
Confidence 0000000 0 1112233567889999999999999999877766655543 478999999
Q ss_pred CCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 689 DVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 689 ~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+||....+. ..++.+.|.+|+++++
T Consensus 247 ~gH~~~~e~-p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 247 RGHCPHMSH-PDETIQLIGDYLKAHV 271 (271)
T ss_dssp ESSCHHHHC-HHHHHHHHHHHHHHHC
T ss_pred CCcCccccC-HHHHHHHHHHHHHhcC
Confidence 999765443 4578899999998764
No 191
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.67 E-value=9.3e-16 Score=155.29 Aligned_cols=228 Identities=17% Similarity=0.165 Sum_probs=132.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++.... + ..|.||++||.+.+ ...|...+..|+++ |.|+++|+|| +|.+... .........
T Consensus 17 ~g~~l~y~~~------G--~g~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~-~~~~~~~~~ 81 (294)
T 1ehy_A 17 PDVKIHYVRE------G--AGPTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRG---FGDSEKP-DLNDLSKYS 81 (294)
T ss_dssp SSCEEEEEEE------E--CSSEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTT---STTSCCC-CTTCGGGGC
T ss_pred CCEEEEEEEc------C--CCCEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCC---CCCCCCC-ccccccCcC
Confidence 5666764332 1 34689999997654 56788888888776 9999999999 6655321 000001234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccC-CC--CCCcee------
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-TD--IPDWCY------ 611 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~-~~--~~~~~~------ 611 (715)
+++..+.+..+++.- ..+++.|+||||||.+++.+|.++|++++++|++++.......... .. ...|..
T Consensus 82 ~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 82 LDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp HHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 666666666666552 3478999999999999999999999999999999863211000000 00 000100
Q ss_pred -eec-cCCCC------C----CC-CC--CCCChhhHHHHH-----------------hc--Cchh-----hccCCCCcEE
Q 005093 612 -VES-YGSKG------K----DS-FT--ESPSVEDLTRFH-----------------SK--SPIS-----HISKVKTPTI 652 (715)
Q Consensus 612 -~~~-~~~~~------~----~~-~~--~~~~~~~~~~~~-----------------~~--sp~~-----~~~~i~~P~L 652 (715)
... ..... . .. .. .....+..+.+. .. .... .+.++++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 239 (294)
T 1ehy_A 160 MAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVT 239 (294)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEE
T ss_pred hhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEE
Confidence 000 00000 0 00 00 000011111110 00 0000 2237889999
Q ss_pred EEeeCCCCcCCc-hHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 653 FLLGAQDLRVPV-SNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 653 ii~G~~D~~v~~-~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
+++|++|..+|. .....+.+. -..+++++++++||....+. ..++.+.|.+||
T Consensus 240 vi~G~~D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl 293 (294)
T 1ehy_A 240 MIWGLGDTCVPYAPLIEFVPKY----YSNYTMETIEDCGHFLMVEK-PEIAIDRIKTAF 293 (294)
T ss_dssp EEEECCSSCCTTHHHHHHHHHH----BSSEEEEEETTCCSCHHHHC-HHHHHHHHHHHC
T ss_pred EEEeCCCCCcchHHHHHHHHHH----cCCCceEEeCCCCCChhhhC-HHHHHHHHHHHh
Confidence 999999998874 333333332 34589999999999765443 446777787775
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=2.2e-15 Score=171.80 Aligned_cols=270 Identities=13% Similarity=0.106 Sum_probs=169.3
Q ss_pred ceEEeeCCCCceEEEEecCCC-CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
...+.++|||++++|+++.++ ....+|.+. .+++.+.+++......+. +..+..++|||||++|||......
T Consensus 70 ~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~---~~~~~~~~~SPDG~~la~~~~~~G--- 143 (695)
T 2bkl_A 70 DSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG---TVSLGTWAVSWDGKKVAFAQKPNA--- 143 (695)
T ss_dssp CEECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS---CEEEEEEEECTTSSEEEEEEEETT---
T ss_pred ccCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC---CEEEEEEEECCCCCEEEEEECCCC---
Confidence 344566799999999988763 245678887 577777787643211000 012378999999999999876531
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
. ....|+++|+++|+..... .........++|||||+. |
T Consensus 144 -------------------------------~-----~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~----l 182 (695)
T 2bkl_A 144 -------------------------------A-----DEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKG----F 182 (695)
T ss_dssp -------------------------------C-----SCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSE----E
T ss_pred -------------------------------C-----ceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCE----E
Confidence 1 2378999999999875111 111222367899999999 9
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc--eecCCC---CccccceeEcCCCCeEEE
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~---~~~~~~~~~spdg~~l~~ 277 (715)
+|++...... +-.....+..+||++++ .++.. +.+... ......+.|||||++|++
T Consensus 183 ~~~~~d~~~~--~~~~~~~~~~~v~~~~l-----------------~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 183 YYEWLPTDPS--IKVDERPGYTTIRYHTL-----------------GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp EEEECCCCTT--SCGGGGGGGCEEEEEET-----------------TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEE
T ss_pred EEEEecCCCC--CccccCCCCCEEEEEEC-----------------CCCchhceEEEecCCCCEEEEEEEECCCCCEEEE
Confidence 9987532100 00001124457999997 55442 233332 235678999999999999
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC-Ce
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-SS 356 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~-~~ 356 (715)
.+... ....+||+++..+++.+.++.... ....+.| +||+ +++.+... ..
T Consensus 244 ~~~~~-------~~~~~l~~~~~~~~~~~~l~~~~~--------------------~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 244 YILRG-------WSENDVYWKRPGEKDFRLLVKGVG--------------------AKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp EEEET-------TTEEEEEEECTTCSSCEEEEECSS--------------------CCEEEEE-ETTE-EEEEECTTCTT
T ss_pred EEeCC-------CCceEEEEEcCCCCceEEeecCCC--------------------ceEEEEe-cCCc-EEEEECCCCCC
Confidence 98763 134579999876655544432211 1112234 6888 88877644 46
Q ss_pred eEEEEEECCCCcE---EEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 357 QVIISVNVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 357 ~~l~~~d~~tg~~---~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
..|+.+|+++++. +.+...........++..++.++++... +...+|+++++.
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~ 350 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLK-DATSEVRVATLK 350 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEE-TTEEEEEEEETT
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEE-CCEEEEEEEeCC
Confidence 7999999988763 6666544222233344446777776644 334568877764
No 193
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.67 E-value=1.7e-15 Score=154.75 Aligned_cols=117 Identities=18% Similarity=0.279 Sum_probs=78.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++....-+ ...|.||++||++.......+ ...+..+||.|+++|+|| ||.+... .......
T Consensus 20 ~g~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~ 84 (313)
T 1azw_A 20 DRHTLYFEQCGN------PHGKPVVMLHGGPGGGCNDKM---RRFHDPAKYRIVLFDQRG---SGRSTPH---ADLVDNT 84 (313)
T ss_dssp SSCEEEEEEEEC------TTSEEEEEECSTTTTCCCGGG---GGGSCTTTEEEEEECCTT---STTSBST---TCCTTCC
T ss_pred CCCEEEEEecCC------CCCCeEEEECCCCCccccHHH---HHhcCcCcceEEEECCCC---CcCCCCC---ccccccc
Confidence 566665443322 134669999997654322111 233446899999999999 6655321 1111234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
.+++.+.+..+++.- ..+++.|+||||||.+++.+|.++|++++++|++++.
T Consensus 85 ~~~~~~dl~~l~~~l--~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 85 TWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp HHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 556666666666552 3568999999999999999999999999999998864
No 194
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.67 E-value=7.7e-16 Score=153.22 Aligned_cols=218 Identities=15% Similarity=0.123 Sum_probs=130.9
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
...+.|.||++||++.. ...|...+..|++. |.|+++|+|| +|.+... .....+++..+.+..+++.
T Consensus 16 ~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~-~~v~~~d~~G---~G~s~~~-----~~~~~~~~~~~~~~~~l~~-- 82 (267)
T 3fla_A 16 APDARARLVCLPHAGGS--ASFFFPLAKALAPA-VEVLAVQYPG---RQDRRHE-----PPVDSIGGLTNRLLEVLRP-- 82 (267)
T ss_dssp CTTCSEEEEEECCTTCC--GGGGHHHHHHHTTT-EEEEEECCTT---SGGGTTS-----CCCCSHHHHHHHHHHHTGG--
T ss_pred CCCCCceEEEeCCCCCC--chhHHHHHHHhccC-cEEEEecCCC---CCCCCCC-----CCCcCHHHHHHHHHHHHHh--
Confidence 34567999999997654 56788888888655 9999999999 6665421 1122455666555555544
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCc----eeEEEecCCcchhhhhccCCC-CCCceeeeccCCCC--CCCCCCCCC-
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTD-IPDWCYVESYGSKG--KDSFTESPS- 628 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~- 628 (715)
.+.+++.|+|||+||.+++.++.++|++ ++++++.++............ .....+...+.... .......+.
T Consensus 83 ~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 83 FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 2457899999999999999999999986 888888876542211100000 00000000000000 000000000
Q ss_pred h--------hhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchH
Q 005093 629 V--------EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 700 (715)
Q Consensus 629 ~--------~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 700 (715)
. ..........+.. ..++++|+|+++|++|..+|.+.+..+.+.+. .+++++++++ ||.+... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~-~~~ 236 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTT---GPADLRVLPG-GHFFLVD-QAA 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBS---SCEEEEEESS-STTHHHH-THH
T ss_pred HHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcC---CCceEEEecC-Cceeecc-CHH
Confidence 0 0000001111111 14678999999999999999877666554442 2589999998 9976543 455
Q ss_pred HHHHHHHHHHHHh
Q 005093 701 ESFLNIGLWFKKY 713 (715)
Q Consensus 701 ~~~~~i~~wl~~~ 713 (715)
++.+.|.+||++.
T Consensus 237 ~~~~~i~~fl~~~ 249 (267)
T 3fla_A 237 PMIATMTEKLAGP 249 (267)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHhccc
Confidence 7888888888764
No 195
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.66 E-value=3.3e-15 Score=178.44 Aligned_cols=288 Identities=13% Similarity=0.022 Sum_probs=192.2
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
...||..+. + .+..+|+... +.+..|+|||| +++|+.+.+ +...+|.+. .++..+.++... ..
T Consensus 184 ~~~lw~~~~--~-~~~~~l~~~~-----~~v~~~~~s~d--~l~~~~~~d-g~~~l~~~~~~g~~~~~l~~~~-~~---- 247 (1045)
T 1k32_A 184 RGKIWIEVN--S-GAFKKIVDMS-----THVSSPVIVGH--RIYFITDID-GFGQIYSTDLDGKDLRKHTSFT-DY---- 247 (1045)
T ss_dssp CCEEEEEEE--T-TEEEEEECCS-----SCCEEEEEETT--EEEEEECTT-SSCEEEEEETTSCSCEECCCCC-SS----
T ss_pred cCCEEEECC--C-CCeEECcCCC-----CcccceEEeCC--EEEEEEecc-CceEEEEEeCCCCcceEecCCC-Cc----
Confidence 456776332 2 2334443323 67899999998 888887765 667888888 455555554322 12
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC----------CCCcCCCCCCCCCccc-CCcCcccCCccCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG----------SSDKDCNSWKGQGDWE-EDWGETYAGKRQP 162 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 162 (715)
..+.|||||++|+|.... ....+........ ............+.|. |+ |..++.....
T Consensus 248 ------~~~~~SpDG~~la~~~~~---~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pd-G~~la~~~~~ 317 (1045)
T 1k32_A 248 ------YPRHLNTDGRRILFSKGG---SIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLD-GDLIAFVSRG 317 (1045)
T ss_dssp ------CEEEEEESSSCEEEEETT---EEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECG-GGCEEEEETT
T ss_pred ------ceeeEcCCCCEEEEEeCC---EEEEecCCceEeeeeccCcccccccccccccccceeeecCCC-CCEEEEEEcC
Confidence 567999999999997421 0111111000000 0000001123456677 77 5555555578
Q ss_pred eEEEEEccCCceEeecCCCCCC-ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEE-EEecccccchhhh
Q 005093 163 SLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY-AVRVSLYKSEASE 240 (715)
Q Consensus 163 ~l~~~~~~~g~~~~l~~~~~~~-~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~~~~ 240 (715)
.|+++++++++...+ ..... .+..+.|| ||+. |+|.+. ...|| ++++
T Consensus 318 ~i~~~~~~~~~~~~~--~~~~~~~~~~~~~s-dg~~----l~~~s~---------------~~~l~~~~d~--------- 366 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKV--PEPLRIRYVRRGGD-TKVA----FIHGTR---------------EGDFLGIYDY--------- 366 (1045)
T ss_dssp EEEEECTTSSBEEEC--SCCSCEEEEEECSS-SEEE----EEEEET---------------TEEEEEEEET---------
T ss_pred EEEEEcCCCCceEEc--cCCCcceEEeeeEc-CCCe----EEEEEC---------------CCceEEEEEC---------
Confidence 899999999988887 33333 57789999 9999 998762 23799 8997
Q ss_pred hhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
.+++.+.++........++|||||++|++.+.+. .|+++|+.+++.+.+....
T Consensus 367 --------~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~-----------~v~~~d~~tg~~~~~~~~~-------- 419 (1045)
T 1k32_A 367 --------RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRF-----------EIMTVDLETGKPTVIERSR-------- 419 (1045)
T ss_dssp --------TTCCEEECCCCCCSEEEEEECTTSSEEEEEETTS-----------EEEEEETTTCCEEEEEECS--------
T ss_pred --------CCCCceEecCCccceeeeEECCCCCEEEEECCCC-----------eEEEEECCCCceEEeccCC--------
Confidence 7777788885556788899999999999887652 5999999887654332110
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeC-------CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEE
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~-------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~ 393 (715)
...+..++|+|||+.|++.+... ....|+.+|+++++...++..........|+++|+.|++
T Consensus 420 -----------~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 420 -----------EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp -----------SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred -----------CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEE
Confidence 01345778999999888877643 356899999999998888766554444679999999988
Q ss_pred EEeC
Q 005093 394 VSSS 397 (715)
Q Consensus 394 ~~~~ 397 (715)
....
T Consensus 489 ~s~~ 492 (1045)
T 1k32_A 489 LSYR 492 (1045)
T ss_dssp EESC
T ss_pred Eecc
Confidence 7653
No 196
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.66 E-value=1.8e-16 Score=160.75 Aligned_cols=226 Identities=12% Similarity=0.065 Sum_probs=135.7
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|..++...+- ..|.||++||++.. ...|...+..|+++ |.|+++|+|| +|.+... ....
T Consensus 17 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~-----~~~~ 77 (301)
T 3kda_A 17 VDGVKLHYVKGG--------QGPLVMLVHGFGQT--WYEWHQLMPELAKR-FTVIAPDLPG---LGQSEPP-----KTGY 77 (301)
T ss_dssp ETTEEEEEEEEE--------SSSEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTT---STTCCCC-----SSCS
T ss_pred eCCeEEEEEEcC--------CCCEEEEECCCCcc--hhHHHHHHHHHHhc-CeEEEEcCCC---CCCCCCC-----CCCc
Confidence 367777644432 45789999997655 55677788889888 9999999999 5544321 1223
Q ss_pred chhhHHHHHHHHHHcCCCCCce-EEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC------CCCCcee-
Q 005093 540 DVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT------DIPDWCY- 611 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~------~~~~~~~- 611 (715)
.++++.+.+..+++. ++.++ +.|+|||+||.+++.++.++|++++++|+++|........... ....|..
T Consensus 78 ~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (301)
T 3kda_A 78 SGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFS 155 (301)
T ss_dssp SHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHH
Confidence 455666555555554 23456 9999999999999999999999999999999864211110000 0000000
Q ss_pred --------eeccCC--------CCCCCCCC---CCChhhHHHHHh--c-----------------------CchhhccCC
Q 005093 612 --------VESYGS--------KGKDSFTE---SPSVEDLTRFHS--K-----------------------SPISHISKV 647 (715)
Q Consensus 612 --------~~~~~~--------~~~~~~~~---~~~~~~~~~~~~--~-----------------------sp~~~~~~i 647 (715)
...+.. ........ .........+.. . .....+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 235 (301)
T 3kda_A 156 FFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQM 235 (301)
T ss_dssp HHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCS
T ss_pred HhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhcccc
Confidence 000000 00000000 000011111100 0 001122378
Q ss_pred CCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 648 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 648 ~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
++|+|+++|++| ++......+ .+....+++++++++||..... ...++.+.|.+|+++.
T Consensus 236 ~~P~l~i~G~~D--~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 236 PTMTLAGGGAGG--MGTFQLEQM----KAYAEDVEGHVLPGCGHWLPEE-CAAPMNRLVIDFLSRG 294 (301)
T ss_dssp CEEEEEECSTTS--CTTHHHHHH----HTTBSSEEEEEETTCCSCHHHH-THHHHHHHHHHHHTTS
T ss_pred CcceEEEecCCC--CChhHHHHH----HhhcccCeEEEcCCCCcCchhh-CHHHHHHHHHHHHhhC
Confidence 999999999999 555554444 3333568999999999987643 3457888899998764
No 197
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.66 E-value=1.4e-16 Score=161.21 Aligned_cols=229 Identities=16% Similarity=0.096 Sum_probs=137.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++...+- +.|+||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+..... .......
T Consensus 16 ~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~~-~~~~~~~ 80 (297)
T 2qvb_A 16 AGKRMAYIDEG--------KGDAIVFQHGNPTS--SYLWRNIMPHLEG-LGRLVACDLIG---MGASDKLSP-SGPDRYS 80 (297)
T ss_dssp TTEEEEEEEES--------SSSEEEEECCTTCC--GGGGTTTGGGGTT-SSEEEEECCTT---STTSCCCSS-CSTTSSC
T ss_pred CCEEEEEEecC--------CCCeEEEECCCCch--HHHHHHHHHHHhh-cCeEEEEcCCC---CCCCCCCCC-ccccCcC
Confidence 56677644331 24899999997654 4456666777765 49999999999 554432110 0111134
Q ss_pred hhhHHHHHHHHHHcCCCCC-ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCC----------CCCC-
Q 005093 541 VNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------DIPD- 608 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~----------~~~~- 608 (715)
.++..+.+..+++. ++. +++.++|||+||.+++.++.++|++++++|+++|........... ....
T Consensus 81 ~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (297)
T 2qvb_A 81 YGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQG 158 (297)
T ss_dssp HHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTH
T ss_pred HHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccc
Confidence 66666666655555 244 789999999999999999999999999999999865311000000 0000
Q ss_pred c-------eeeecc-C----CCC--------CCCCCCC-CChhh-HHHHHhc--------------CchhhccCCCCcEE
Q 005093 609 W-------CYVESY-G----SKG--------KDSFTES-PSVED-LTRFHSK--------------SPISHISKVKTPTI 652 (715)
Q Consensus 609 ~-------~~~~~~-~----~~~--------~~~~~~~-~~~~~-~~~~~~~--------------sp~~~~~~i~~P~L 652 (715)
. .+...+ . ... ...+... ..... ...+... +....+.++++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 238 (297)
T 2qvb_A 159 EPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL 238 (297)
T ss_dssp HHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred hhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEE
Confidence 0 000000 0 000 0000000 00000 0111111 12334567899999
Q ss_pred EEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 653 FLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 653 ii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+++|++|..+|.+.+..+.+.+ .. +++++ ++||..... ...++.+.|.+||++.
T Consensus 239 ii~G~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~~-~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 239 FINAEPGAIITGRIRDYVRSWP----NQ-TEITV-PGVHFVQED-SPEEIGAAIAQFVRRL 292 (297)
T ss_dssp EEEEEECSSSCHHHHHHHHTSS----SE-EEEEE-EESSCGGGT-CHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcCCHHHHHHHHHHc----CC-eEEEe-cCccchhhh-CHHHHHHHHHHHHHHH
Confidence 9999999999987766555443 33 78888 999986644 4567889999999875
No 198
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.66 E-value=1.9e-15 Score=158.53 Aligned_cols=244 Identities=14% Similarity=0.104 Sum_probs=149.2
Q ss_pred cccCCCCce--EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC--Cc----------------cch-HHHHHH-HhCCcEE
Q 005093 456 NLTKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS--LS----------------SYS-KSLAFL-SSVGYSL 513 (715)
Q Consensus 456 ~~~~~~g~~--l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~--~~----------------~~~-~~~~~l-a~~G~~v 513 (715)
...+.+|.+ ..+.++.|.+. ..+.|+|.|-||...... .. .+. ..+..+ +++||+|
T Consensus 81 ~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~V 158 (462)
T 3guu_A 81 RTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYV 158 (462)
T ss_dssp EEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEE
T ss_pred EEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEE
Confidence 344556655 88999999863 235899999999443211 00 112 245666 8999999
Q ss_pred EEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC-CCceEEEEEeChhHHHHHHHHhhC----CC-ceeE
Q 005093 514 LIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA-NPSKVTVVGGSHGGFLTTHLIGQA----PD-KFVA 587 (715)
Q Consensus 514 i~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~-d~~~i~l~G~S~GG~~a~~~a~~~----p~-~~~~ 587 (715)
+++||+|.+ ..+. .+.....++.++++.+.+...+ ...+++++|||+||..+++++..+ |+ .+++
T Consensus 159 v~~Dy~G~G---~~y~------~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g 229 (462)
T 3guu_A 159 VSSDHEGFK---AAFI------AGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVG 229 (462)
T ss_dssp EEECTTTTT---TCTT------CHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEecCCCCC---Cccc------CCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEE
Confidence 999999954 3221 1111122344444444433223 348999999999999999887754 34 5889
Q ss_pred EEecCCcchhhhhccCCCCCCc------------------------------------------eeee---ccCCCC-CC
Q 005093 588 AAARNPLCNLALMVGTTDIPDW------------------------------------------CYVE---SYGSKG-KD 621 (715)
Q Consensus 588 ~v~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~---~~~~~~-~~ 621 (715)
++..++..++.......+...+ +... .+.... ..
T Consensus 230 ~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 309 (462)
T 3guu_A 230 ASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFS 309 (462)
T ss_dssp EEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGGG
T ss_pred EEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHHH
Confidence 9999988776433211000000 0000 000000 00
Q ss_pred CCCCCCC---hhhHHHHHhcCchh-----hccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccC
Q 005093 622 SFTESPS---VEDLTRFHSKSPIS-----HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 693 (715)
Q Consensus 622 ~~~~~~~---~~~~~~~~~~sp~~-----~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 693 (715)
.+.+... ....+.+.+..... ...+.++|+||+||.+|.+||+.++.+++++++++|.++++++|++++|..
T Consensus 310 ~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~ 389 (462)
T 3guu_A 310 LVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLT 389 (462)
T ss_dssp GBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHH
T ss_pred HcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccC
Confidence 1110000 01111222222111 124567899999999999999999999999999999999999999999976
Q ss_pred CCCCchHHHHHHHHHHHHHhc
Q 005093 694 ERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 694 ~~~~~~~~~~~~i~~wl~~~l 714 (715)
... ..+..+++||+++|
T Consensus 390 ~~~----~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 390 AEI----FGLVPSLWFIKQAF 406 (462)
T ss_dssp HHH----HTHHHHHHHHHHHH
T ss_pred chh----hhHHHHHHHHHHHh
Confidence 422 23678899998875
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.66 E-value=3.2e-15 Score=171.66 Aligned_cols=270 Identities=12% Similarity=0.127 Sum_probs=169.9
Q ss_pred ceEEeeCCCCceEEEEecCCC-CCCeEEEEe-c---CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-S---QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~-~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
...+.++|||++++|+++.++ ....+|.+. . +++.+.+++......+. +..+..++|||||++|||.....
T Consensus 109 ~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDG~~la~~~~~~- 184 (741)
T 1yr2_A 109 ERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG---ATALDAWAASDDGRLLAYSVQDG- 184 (741)
T ss_dssp CEECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEET-
T ss_pred cccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC---CEEEEeEEECCCCCEEEEEEcCC-
Confidence 344566799999999998763 246778887 4 66777776643211100 01236899999999999987653
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
|. ...+|+++|+++|+.... .........++|||| +.
T Consensus 185 ---------------------------------G~-----e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~-- 221 (741)
T 1yr2_A 185 ---------------------------------GS-----DWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DA-- 221 (741)
T ss_dssp ---------------------------------TC-----SEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SE--
T ss_pred ---------------------------------CC-----ceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CE--
Confidence 11 236799999999987665 222223457899999 98
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc--eecCCCC---ccccceeEcCCCCe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTESI---SSAFFPRFSPDGKF 274 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~~---~~~~~~~~spdg~~ 274 (715)
|+|++..... +.+.....+...+||++++ .++.. +.+.... .....+.|||||++
T Consensus 222 --l~~~~~~~~~-~~~~~~~~~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 222 --LLYSRFAEPK-EGQAFQALNYNQTVWLHRL-----------------GTPQSADQPVFATPELPKRGHGASVSSDGRW 281 (741)
T ss_dssp --EEEEECCCC---------CCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred --EEEEEecCcc-cccccccCCCCCEEEEEEC-----------------CCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence 9998743221 0011112234567999997 44432 2333222 23678999999999
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCC--C-CCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTN--G-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~--~-~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
|+|.+.+.. ....+||++|+.++ + .+.++...+ .. ...+++||+.|++.+
T Consensus 282 l~~~~~~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~--------------------~~-~~~~~~dg~~l~~~s 334 (741)
T 1yr2_A 282 VVITSSEGT------DPVNTVHVARVTNGKIGPVTALIPDLK--------------------AQ-WDFVDGVGDQLWFVS 334 (741)
T ss_dssp EEEEEECTT------CSCCEEEEEEEETTEECCCEEEECSSS--------------------SC-EEEEEEETTEEEEEE
T ss_pred EEEEEEccC------CCcceEEEEECCCCCCcccEEecCCCC--------------------ce-EEEEeccCCEEEEEE
Confidence 999987641 13467999999876 3 333332110 01 112458999999988
Q ss_pred eeCC-eeEEEEEECCCC--cEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 352 IWGS-SQVIISVNVSSG--ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 352 ~~~~-~~~l~~~d~~tg--~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.... ..+|+.+|++++ +.+.++..... ....++..++.++++.... .-.+|+++++.
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~d-g~~~l~~~~~~ 394 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHD-AKSQVLAFDLD 394 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEET-TEEEEEEEETT
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEEC-CEEEEEEEeCC
Confidence 7543 678999999884 56777655432 2334555577777766543 34568877754
No 200
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.66 E-value=9.2e-16 Score=152.35 Aligned_cols=228 Identities=10% Similarity=0.072 Sum_probs=132.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|.+++....-+ ...|+||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+... .....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~ 69 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQD--HRLFKNLAPLLAR-DFHVICPDWRG---HDAKQTD-----SGDFD 69 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCC--GGGGTTHHHHHTT-TSEEEEECCTT---CSTTCCC-----CSCCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCc--HhHHHHHHHHHHh-cCcEEEEcccc---CCCCCCC-----ccccC
Confidence 556665443322 246799999997655 4567788888855 59999999999 5554321 22234
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcchhh-----hhccCCCCCCcee---
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLA-----LMVGTTDIPDWCY--- 611 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~~~-----~~~~~~~~~~~~~--- 611 (715)
.+++.+.+..+++.- +.+++.|+|||+||.+++.+|.++ |++++++|+++|..... .+........+..
T Consensus 70 ~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 3ibt_A 70 SQTLAQDLLAFIDAK--GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQ 147 (264)
T ss_dssp HHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHH
Confidence 566666666555552 456899999999999999999999 99999999998765100 0000000000000
Q ss_pred --eec-cCCCC--------CCCCCCCCChhhHH----HH-----HhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHH
Q 005093 612 --VES-YGSKG--------KDSFTESPSVEDLT----RF-----HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA 671 (715)
Q Consensus 612 --~~~-~~~~~--------~~~~~~~~~~~~~~----~~-----~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~ 671 (715)
... +.... ...+.... ..... .+ ...++...+.++++|+|+++|..|...+. .....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~--~~~~~ 224 (264)
T 3ibt_A 148 SFFDEWAETTDNADVLNHLRNEMPWFH-GEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQD--YRQLQ 224 (264)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHTGGGSC-HHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHH--HHHHH
T ss_pred HHHHHhcccCCcHHHHHHHHHhhhhcc-chhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchh--hHHHH
Confidence 000 00000 00000000 00000 00 01122356678999999998755543321 11223
Q ss_pred HHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 672 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 672 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
+.+.+.-...++++++++||..... ...++.+.|.+||+
T Consensus 225 ~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 225 LEFAAGHSWFHPRHIPGRTHFPSLE-NPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHCTTEEEEECCCSSSCHHHH-CHHHHHHHHHHHTC
T ss_pred HHHHHhCCCceEEEcCCCCCcchhh-CHHHHHHHHHHHHh
Confidence 3344444568999999999976533 34577788888875
No 201
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.65 E-value=6.3e-16 Score=153.83 Aligned_cols=210 Identities=16% Similarity=0.191 Sum_probs=124.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.. ...|...+..|++.||.|+++|+|| +|.+... ....++++.+.+..+++.-..+..
T Consensus 16 ~~~vvllHG~~~~--~~~w~~~~~~L~~~~~~vi~~Dl~G---hG~S~~~------~~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGS--GADWQPVLSHLARTQCAALTLDLPG---HGTNPER------HCDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCC--GGGGHHHHHHHTTSSCEEEEECCTT---CSSCC-------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCC--HHHHHHHHHHhcccCceEEEecCCC---CCCCCCC------CccCHHHHHHHHHHHHHHhCcCCC
Confidence 4889999996654 5678888889977899999999999 5554321 112355666666555555323323
Q ss_pred eEEEEEeChhHHHHHH---HHhhCCCceeEEEecCCcchhhhhc-------------c-CCCCCCceeeeccCCCCCCCC
Q 005093 561 KVTVVGGSHGGFLTTH---LIGQAPDKFVAAAARNPLCNLALMV-------------G-TTDIPDWCYVESYGSKGKDSF 623 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~---~a~~~p~~~~~~v~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~ 623 (715)
++.|+||||||.+++. +|.++|++++++|+.++........ . ............+.. ...+
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 162 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ--QAVF 162 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT--SGGG
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhh--hhhh
Confidence 4999999999999999 8888999999999987643211000 0 000000000000000 0000
Q ss_pred CCCCC--------------hhhHH-HHHh------cCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEE
Q 005093 624 TESPS--------------VEDLT-RFHS------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 682 (715)
Q Consensus 624 ~~~~~--------------~~~~~-~~~~------~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~ 682 (715)
..... ..... .+.. .+....+.++++|+|+++|++|..++ .+.+.+ . .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~--~~ 232 (264)
T 1r3d_A 163 SSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS---G--LS 232 (264)
T ss_dssp TTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH---C--SE
T ss_pred hccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh---C--Cc
Confidence 00000 00000 0110 11223456789999999999997541 223332 2 56
Q ss_pred EEEeCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 683 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 683 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
+++++++||....+. ..++.+.|.+|++++.
T Consensus 233 ~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 233 YSQVAQAGHNVHHEQ-PQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEETTCCSCHHHHC-HHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCCchhhcC-HHHHHHHHHHHHHHhc
Confidence 889999999876443 4578899999998764
No 202
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.65 E-value=1.1e-15 Score=157.48 Aligned_cols=211 Identities=13% Similarity=0.114 Sum_probs=125.4
Q ss_pred CCcEEEEEcCCCCCC-CCccchHHHHHHHhCCcEEEEEcC----CCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHc
Q 005093 480 CDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNY----RGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 554 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~-~~~~~~~~~~~la~~G~~vi~~d~----rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 554 (715)
..|+||++||.+... ....|...+..| ++||.|+++|+ || +|.+.. ....+|+.++++++.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G---~G~S~~--------~~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIG---SGPQDH--------AHDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTT---SCSCCH--------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCC---CCCccc--------cCcHHHHHHHHHHHHHH
Confidence 457899999955432 223355677777 78999999964 67 555421 12367888888888775
Q ss_pred CCCCCceEEEEEeChhHHHHHHHHh--hCCCceeEEEecCCcchhhhh-----------------ccCCCCCCceeeecc
Q 005093 555 GLANPSKVTVVGGSHGGFLTTHLIG--QAPDKFVAAAARNPLCNLALM-----------------VGTTDIPDWCYVESY 615 (715)
Q Consensus 555 ~~~d~~~i~l~G~S~GG~~a~~~a~--~~p~~~~~~v~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~ 615 (715)
.+.+++.|+||||||.+++.++. .+|++++++|+.+|....... ..............+
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKH 182 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCGGGGTTT
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCccccccchhh
Confidence 35688999999999999999998 579999999998876432100 000000000000000
Q ss_pred C-CCC-CCCCCC--CCChh-h-HHHHH---hcCchhhccCCCCcEEEEeeCCCCcCCchHH-HHHHHHHHHcCCcEE---
Q 005093 616 G-SKG-KDSFTE--SPSVE-D-LTRFH---SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVETK--- 682 (715)
Q Consensus 616 ~-~~~-~~~~~~--~~~~~-~-~~~~~---~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~-~~~~~~l~~~g~~~~--- 682 (715)
. ... ...+.. ..... . ..... ..+....+.++++|+|+++|++|.++|+... ..+.+.+.+.-...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~~~~~ 262 (335)
T 2q0x_A 183 YDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCNRVTV 262 (335)
T ss_dssp CSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSSCEEE
T ss_pred ccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCcccccc
Confidence 0 000 000000 00000 0 00000 0112235678999999999999999998642 233444544322333
Q ss_pred -----E-----EEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 683 -----V-----IVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 683 -----~-----~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+ ++++++|| +..+.+.+||++.
T Consensus 263 ~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 263 SYFNDTCDELRRVLKAAES---------EHVAAILQFLADE 294 (335)
T ss_dssp EECCCEECTTSCEEECCHH---------HHHHHHHHHHHHH
T ss_pred ccccchhhhhhcccCCCCC---------HHHHHHHHHHHhh
Confidence 5 78999999 3478899998764
No 203
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.8e-15 Score=148.54 Aligned_cols=203 Identities=16% Similarity=0.101 Sum_probs=126.5
Q ss_pred CCcEEEEEcCCCCCCCCccch----HHHHHHHhCCcEEEEEcCCCCCC------------------Cch--hhhhcCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSLG------------------FGE--EALQSLPGK 535 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~----~~~~~la~~G~~vi~~d~rG~~~------------------~g~--~~~~~~~~~ 535 (715)
+.|.||++||.+.+ ...|. .+...|.++||.|+.+|+++... +|. .|.. .
T Consensus 4 ~~~~vl~lHG~g~~--~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~----~ 77 (243)
T 1ycd_A 4 QIPKLLFLHGFLQN--GKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFY----H 77 (243)
T ss_dssp CCCEEEEECCTTCC--HHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSC----C
T ss_pred cCceEEEeCCCCcc--HHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCccccc----C
Confidence 56899999996554 33333 35566777899999999993210 111 1100 0
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCC------CceeEEEecCCcchhhhhccCCCCCCc
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP------DKFVAAAARNPLCNLALMVGTTDIPDW 609 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~ 609 (715)
.......|+.++++++.+....+..+++|+||||||.+|+.++.+++ ..++++++.++....... ......
T Consensus 78 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~---~~~~~~ 154 (243)
T 1ycd_A 78 SEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD---PEHPGE 154 (243)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC---TTSTTC
T ss_pred CCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc---cccccc
Confidence 01122456666677666542233468999999999999999988642 246777777765422100 000000
Q ss_pred eeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcC---CcEEEEEe
Q 005093 610 CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG---VETKVIVF 686 (715)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g---~~~~~~~~ 686 (715)
. .+. .. + ...+..+.++++|+|++||++|.++|++.+..+++.+...+ .....+++
T Consensus 155 ~---~~~-------------~~---~--~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (243)
T 1ycd_A 155 L---RIT-------------EK---F--RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYE 213 (243)
T ss_dssp E---EEC-------------GG---G--TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEE
T ss_pred c---ccc-------------hh---H--HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEe
Confidence 0 000 00 0 01122345688999999999999999999999999887652 11234456
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 687 PNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 687 ~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
+++||.+... ..+.+.+.+||+++++
T Consensus 214 ~~~gH~~~~~---~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 214 HPGGHMVPNK---KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp ESSSSSCCCC---HHHHHHHHHHHHHHHC
T ss_pred cCCCCcCCch---HHHHHHHHHHHHHhhh
Confidence 6789976543 3588999999998764
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=2.3e-15 Score=156.28 Aligned_cols=249 Identities=10% Similarity=0.058 Sum_probs=156.9
Q ss_pred ccceEEeeCCCCceEEEEecCC-----CCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 43 TGASAVVPSPSGSKLLVVRNPE-----NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
..+..|++ ||++|||+.... .....++.+. .+++.+++ ... ..+.|||||++|+|.+.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~----------~~~~~SpDg~~la~~~~ 78 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENA----------TMPRISPDGKKIAFMRA 78 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESC----------EEEEECTTSSEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccC----------CCeEECCCCCEEEEEEe
Confidence 44678888 999999986432 1234577766 56665554 222 68999999999999865
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
... . ...+||++++++++.+.++ .... +..+.|||||+
T Consensus 79 ~~~----------------------------------~-----~~~~l~~~~~~~g~~~~l~--~~~~-~~~~~wspdg~ 116 (347)
T 2gop_A 79 NEE----------------------------------K-----KVSEIWVADLETLSSKKIL--EAKN-IRSLEWNEDSR 116 (347)
T ss_dssp ETT----------------------------------T-----TEEEEEEEETTTTEEEEEE--EESE-EEEEEECTTSS
T ss_pred ccC----------------------------------C-----CcceEEEEECCCCceEEEE--cCCC-ccceeECCCCC
Confidence 421 0 1367999999999988883 3333 77899999999
Q ss_pred CCccEEEEEeecCccce------------eeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCCccc
Q 005093 197 GLHQYLVFVGWSSETRK------------LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSA 263 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~ 263 (715)
. |+|.+....... .|..+......+||++|+ .+++. +.++. . ..
T Consensus 117 ~----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~-----------------~~~~~~~~l~~-~-~~ 173 (347)
T 2gop_A 117 K----LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT-----------------ESEEVIEEFEK-P-RF 173 (347)
T ss_dssp E----EEEEEECCCC---------CCCC---------CEEEEEEEET-----------------TTTEEEEEEEE-E-TT
T ss_pred E----EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC-----------------CCCeEEeeecC-C-Cc
Confidence 9 999874310000 010010112357999997 77776 77776 4 77
Q ss_pred cceeEcCCCCeEEEEecCCCCCCCCccc-cceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc
Q 005093 264 FFPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 342 (715)
Q Consensus 264 ~~~~~spdg~~l~~~~~~~~~~~g~~~~-~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 342 (715)
..+.||||| ++|.+...... .... ..+||+++ +++.+.++.. . ... .++|
T Consensus 174 ~~~~~spdg--~~~~~~~~~~~--~~~~~~~~l~~~d--~~~~~~l~~~-~--------------------~~~--~~sp 224 (347)
T 2gop_A 174 SSGIWHRDK--IVVNVPHREII--PQYFKFWDIYIWE--DGKEEKMFEK-V--------------------SFY--AVDS 224 (347)
T ss_dssp CEEEEETTE--EEEEEECCCSS--CCSSCCEEEEEEE--TTEEEEEEEE-E--------------------SEE--EEEE
T ss_pred ccccCCCCe--EEEEEeccccc--ccccccccEEEeC--CCceEEeccC-c--------------------cee--eECC
Confidence 889999999 77777553100 0001 45799998 4444333321 0 011 2489
Q ss_pred CCCEEEEEeeeC-----CeeEEEEEECCCCcEEEecCCC-CCcee-EEEeecCCEEEEEEeCCCCCCeEEEEe
Q 005093 343 DGCTMLLSSIWG-----SSQVIISVNVSSGELLRITPAE-SNFSW-SLLTLDGDNIIAVSSSPVDVPQVKYGY 408 (715)
Q Consensus 343 dg~~l~~~~~~~-----~~~~l~~~d~~tg~~~~l~~~~-~~~~~-~~~s~~~~~l~~~~~~~~~p~~l~~~~ 408 (715)
||+.|++.+... ....||.+| +++.+.++... ..+.. ..|+ ++ ++++.... ....|+ ++
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~-~~~~l~-~~ 290 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEE-GSVNLY-IW 290 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEET-TEEEEE-EE
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecC-CcEEEE-Ec
Confidence 999888887643 246899999 78888887653 22332 4566 54 65555433 334566 55
No 205
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.65 E-value=7.4e-16 Score=156.67 Aligned_cols=216 Identities=12% Similarity=0.060 Sum_probs=132.3
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhC--CcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~--G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
.+..|.||++||.+.. ...|...++.|+++ ||.|+++|+|| +|.+... ....++++.+.+..+.+..
T Consensus 33 ~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~l~~~~~~~ 101 (302)
T 1pja_A 33 RASYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFD---GRESLRP------LWEQVQGFREAVVPIMAKA 101 (302)
T ss_dssp --CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSC---SGGGGSC------HHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCC---Cccchhh------HHHHHHHHHHHHHHHhhcC
Confidence 3456789999996554 55788889999998 99999999999 5554321 1134667777777776653
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCCC-ceeEEEecCCcchhhhhc------cCCCCCCceeee-ccCC----CCCCCC
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMV------GTTDIPDWCYVE-SYGS----KGKDSF 623 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~----~~~~~~ 623 (715)
.+++.++||||||.+++.++.++|+ +++++|++++........ ............ .+.. .....+
T Consensus 102 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T 1pja_A 102 ---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNY 178 (302)
T ss_dssp ---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGG
T ss_pred ---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhc
Confidence 4789999999999999999999999 799999998764321000 000000000000 0000 000000
Q ss_pred CCCCC-hhhH-------HHHHhcC-------chhhccCCCCcEEEEeeCCCCcCCchHHHHHHH----------------
Q 005093 624 TESPS-VEDL-------TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR---------------- 672 (715)
Q Consensus 624 ~~~~~-~~~~-------~~~~~~s-------p~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~---------------- 672 (715)
...+. .... ..+.... ....+.+++ |+|+++|++|.++|++.+..+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 1pja_A 179 WHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVY 257 (302)
T ss_dssp BCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHH
T ss_pred ccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhh
Confidence 11111 1100 0000000 123467788 99999999999999887766532
Q ss_pred --------HHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 673 --------ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 673 --------~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
.+.+. ..+++++++++||....+ ....+.+.+.+|+
T Consensus 258 ~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 301 (302)
T 1pja_A 258 LRDSFGLKTLLAR-GAIVRCPMAGISHTAWHS-NRTLYETCIEPWL 301 (302)
T ss_dssp HTTTTSHHHHHHT-TCEEEEECSSCCTTTTTS-CHHHHHHHTGGGC
T ss_pred hhhhhchhhHhhc-CCeEEEEecCcccccccc-CHHHHHHHHHHhc
Confidence 22221 248999999999986644 3446666666665
No 206
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.65 E-value=5.7e-16 Score=163.02 Aligned_cols=212 Identities=11% Similarity=0.033 Sum_probs=140.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcE----EEEEcCCCCCCCchhhhhcCCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS----LLIVNYRGSLGFGEEALQSLPGKV 536 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~----vi~~d~rG~~~~g~~~~~~~~~~~ 536 (715)
.|..+..++|+|+++. .+++|+|+++||+.+... ..+...++.|+++|+. |+++|+++... +.. ...
T Consensus 178 ~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~--r~~--~~~--- 248 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAIDTTH--RAH--ELP--- 248 (403)
T ss_dssp TTEEEEEEEEEC------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCSHHH--HHH--HSS---
T ss_pred cCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCCCcc--ccc--cCC---
Confidence 4677888999998653 578999999999654221 1234567788888875 99999986211 111 111
Q ss_pred CccchhhH--HHHHHHHHHcC--CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCceee
Q 005093 537 GSQDVNDV--LTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 612 (715)
Q Consensus 537 ~~~~~~d~--~~~i~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 612 (715)
......+. .+++.++.++. ..|+++++|+|+||||++++.++.++|++|+++++++|.+.+....
T Consensus 249 ~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~----------- 317 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG----------- 317 (403)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT-----------
T ss_pred ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC-----------
Confidence 11122332 24566766653 2578899999999999999999999999999999999976432110
Q ss_pred eccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc
Q 005093 613 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 692 (715)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 692 (715)
.. +.......+.. . ......+|+++++|+.|..+ ..++.+++++|+++|+++++.++++ +|.
T Consensus 318 ----~~--------~~~~~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~ 379 (403)
T 3c8d_A 318 ----GQ--------QEGVLLEKLKA-G---EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHD 379 (403)
T ss_dssp ----SS--------SCCHHHHHHHT-T---SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred ----CC--------cHHHHHHHHHh-c---cccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCC
Confidence 00 00011111111 1 12345678999999998654 5788999999999999999999999 587
Q ss_pred CCCCCchHHHHHHHHHHHHHh
Q 005093 693 IERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 693 ~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+. .....+..++.||.+.
T Consensus 380 ~~---~w~~~l~~~l~~l~~~ 397 (403)
T 3c8d_A 380 AL---CWRGGLMQGLIDLWQP 397 (403)
T ss_dssp HH---HHHHHHHHHHHHHHGG
T ss_pred HH---HHHHHHHHHHHHHhcc
Confidence 53 2235567788888654
No 207
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.64 E-value=2.5e-15 Score=151.40 Aligned_cols=233 Identities=13% Similarity=0.165 Sum_probs=131.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-----HHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 535 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~-----~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~ 535 (715)
+|.+++...+-+ +....|+||++||.+.... ..|.. .+..|++ +|.|+++|+|| +|.+... .+..
T Consensus 19 ~~~~l~y~~~G~----~~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~L~~-~~~vi~~D~~G---~G~s~~~-~~~~ 88 (286)
T 2qmq_A 19 PYGSVTFTVYGT----PKPKRPAIFTYHDVGLNYK-SCFQPLFRFGDMQEIIQ-NFVRVHVDAPG---MEEGAPV-FPLG 88 (286)
T ss_dssp TTEEEEEEEESC----CCTTCCEEEEECCTTCCHH-HHHHHHHTSHHHHHHHT-TSCEEEEECTT---TSTTCCC-CCTT
T ss_pred CCeEEEEEeccC----CCCCCCeEEEeCCCCCCch-hhhhhhhhhchhHHHhc-CCCEEEecCCC---CCCCCCC-CCCC
Confidence 567776554432 1235689999999665421 11333 5667765 69999999999 5433211 0111
Q ss_pred CCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc--------cC-CCC
Q 005093 536 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------GT-TDI 606 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~--------~~-~~~ 606 (715)
......+++.+.+..+++. .+.+++.|+|||+||.+++.+|.++|++++++|+++|........ .. ...
T Consensus 89 ~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (286)
T 2qmq_A 89 YQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSI 166 (286)
T ss_dssp CCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTSCH
T ss_pred CCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccccc
Confidence 1111355555555444443 234689999999999999999999999999999999854211000 00 000
Q ss_pred CCceeeeccCCCC-----------CCCCCCCCChhhHHHHH----hcCc----hhhccCCCCcEEEEeeCCCCcCCchHH
Q 005093 607 PDWCYVESYGSKG-----------KDSFTESPSVEDLTRFH----SKSP----ISHISKVKTPTIFLLGAQDLRVPVSNG 667 (715)
Q Consensus 607 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~~sp----~~~~~~i~~P~Lii~G~~D~~v~~~~~ 667 (715)
........+.... ...+...........+. .... ...+.++++|+|+++|++|..+| .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~-- 243 (286)
T 2qmq_A 167 PDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A-- 243 (286)
T ss_dssp HHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H--
T ss_pred hHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H--
Confidence 0000000000000 00000000000001110 0011 13456789999999999999986 2
Q ss_pred HHHHHHHHHcCC-cEEEEEeCCCCccCCCCCchHHHHHHHHHHHH
Q 005093 668 LQYARALREKGV-ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 711 (715)
Q Consensus 668 ~~~~~~l~~~g~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 711 (715)
..+.+.+... .+++++++++||.+.... ..++.+.|.+||+
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 --VVECNSKLDPTQTSFLKMADSGGQPQLTQ-PGKLTEAFKYFLQ 285 (286)
T ss_dssp --HHHHHHHSCGGGEEEEEETTCTTCHHHHC-HHHHHHHHHHHHC
T ss_pred --HHHHHHHhcCCCceEEEeCCCCCcccccC-hHHHHHHHHHHhc
Confidence 2344444443 589999999999875433 4577888888885
No 208
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.64 E-value=1.4e-15 Score=151.86 Aligned_cols=213 Identities=17% Similarity=0.135 Sum_probs=130.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCc-----hhhhhcC--
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFG-----EEALQSL-- 532 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g-----~~~~~~~-- 532 (715)
.+.++..++|+|+++++.+++|+|+++||+... ........+.+++ .+..|+.+++++...+. ..+....
T Consensus 23 ~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~--~~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~d~~~~~~~ 100 (278)
T 2gzs_A 23 GTRHYRVWTAVPNTTAPASGYPILYMLDGNAVM--DRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAES 100 (278)
T ss_dssp SSCEEEEEEEEESSCCCTTCEEEEEESSHHHHH--HHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGG
T ss_pred CCceEEEEEECCCCCCCCCCCCEEEEeeChhHH--HHHHHHHHHHhccCCCeEEEEEcCCCCCcCcccccccccCCCCcc
Confidence 367899999999998777889987777774321 1111223455655 67888889987532111 1111000
Q ss_pred --CC--C----CCccchhhHHHHH-----HHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhh
Q 005093 533 --PG--K----VGSQDVNDVLTAI-----DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 599 (715)
Q Consensus 533 --~~--~----~~~~~~~d~~~~i-----~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 599 (715)
+. . .......++.+.+ .++.++..+|++|++|+|+||||++++.++.+ |++|+++++.+|...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~~~~~ 179 (278)
T 2gzs_A 101 RKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGY 179 (278)
T ss_dssp TTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGSTTH
T ss_pred ccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcchhcCc
Confidence 00 0 0001122222222 23334455788899999999999999999999 999999999998643210
Q ss_pred hccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcC--------CchHHHHHH
Q 005093 600 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRV--------PVSNGLQYA 671 (715)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v--------~~~~~~~~~ 671 (715)
. ..........+. ..-..|+++.+|+.|..+ +..++.+++
T Consensus 180 ~-----------------------------~~~~~~~~~~~~---~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~ 227 (278)
T 2gzs_A 180 D-----------------------------ALLSRVTAVEPL---QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTL 227 (278)
T ss_dssp H-----------------------------HHHHHHHTSCTT---TTTTCEEEEEECCC-----------CHHHHHHHHH
T ss_pred c-----------------------------hHHHHHHHhhcc---CCCCCcEEEEecCccccccccchhhhhHHHHHHHH
Confidence 0 000001111100 112368999999999864 368889999
Q ss_pred HHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 672 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 672 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
++|+++|+++++.++++++|.+... ..+...+.||.+
T Consensus 228 ~~L~~~g~~~~~~~~~g~~H~~~~~----~~~~~~l~fl~~ 264 (278)
T 2gzs_A 228 TILKDKGVNAVFWDFPNLGHGPMFN----ASFRQALLDISG 264 (278)
T ss_dssp HHHHHTTCCEEEEECTTCCHHHHHH----HHHHHHHHHHTT
T ss_pred HHHHcCCCeeEEEEcCCCCccchhH----HHHHHHHHHHhh
Confidence 9999999999999999999975422 223445667754
No 209
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.64 E-value=2.8e-16 Score=155.78 Aligned_cols=208 Identities=17% Similarity=0.157 Sum_probs=126.2
Q ss_pred c-EEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 482 P-LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 482 P-~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
| .||++||.+.. ...|...+..|+ .+|.|+++|+|| +|.+... ....+++ .++.+.+. ++ +
T Consensus 13 ~~~vvllHG~~~~--~~~w~~~~~~L~-~~~~vi~~Dl~G---~G~S~~~------~~~~~~~---~~~~l~~~--l~-~ 74 (258)
T 1m33_A 13 NVHLVLLHGWGLN--AEVWRCIDEELS-SHFTLHLVDLPG---FGRSRGF------GALSLAD---MAEAVLQQ--AP-D 74 (258)
T ss_dssp SSEEEEECCTTCC--GGGGGGTHHHHH-TTSEEEEECCTT---STTCCSC------CCCCHHH---HHHHHHTT--SC-S
T ss_pred CCeEEEECCCCCC--hHHHHHHHHHhh-cCcEEEEeeCCC---CCCCCCC------CCcCHHH---HHHHHHHH--hC-C
Confidence 5 79999996544 456777778885 589999999999 6655321 1223444 34444444 34 7
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCc---eeeeccC-------CCCC-CCCCCC---
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW---CYVESYG-------SKGK-DSFTES--- 626 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~-~~~~~~--- 626 (715)
++.|+||||||.+++.+|.++|++++++|++++................ .+...+. .... ......
T Consensus 75 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 1m33_A 75 KAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETA 154 (258)
T ss_dssp SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTH
T ss_pred CeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccc
Confidence 8999999999999999999999999999998764211100000000000 0000000 0000 000000
Q ss_pred ----------------CChhh----HHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEe
Q 005093 627 ----------------PSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 686 (715)
Q Consensus 627 ----------------~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 686 (715)
+.... ...+...+....+.++++|+|+++|++|..+|...+..+.+.+ ...+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i 230 (258)
T 1m33_A 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSESYIF 230 (258)
T ss_dssp HHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC----TTCEEEEE
T ss_pred hhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhC----ccceEEEe
Confidence 00000 0011112223356778999999999999999987665554433 34789999
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 687 PNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 687 ~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+++||....++ ..++.+.|.+|+++
T Consensus 231 ~~~gH~~~~e~-p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 231 AKAAHAPFISH-PAEFCHLLVALKQR 255 (258)
T ss_dssp TTCCSCHHHHS-HHHHHHHHHHHHTT
T ss_pred CCCCCCccccC-HHHHHHHHHHHHHh
Confidence 99999865443 45788889999865
No 210
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.64 E-value=3.7e-16 Score=158.56 Aligned_cols=227 Identities=12% Similarity=0.055 Sum_probs=138.0
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|.++....+- +.|+||++||.+.. ...|...+..|++. |.|+++|+|| +|.+..... ......
T Consensus 16 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~~-~~~~~~ 80 (302)
T 1mj5_A 16 IKGRRMAYIDEG--------TGDPILFQHGNPTS--SYLWRNIMPHCAGL-GRLIACDLIG---MGDSDKLDP-SGPERY 80 (302)
T ss_dssp ETTEEEEEEEES--------CSSEEEEECCTTCC--GGGGTTTGGGGTTS-SEEEEECCTT---STTSCCCSS-CSTTSS
T ss_pred ECCEEEEEEEcC--------CCCEEEEECCCCCc--hhhhHHHHHHhccC-CeEEEEcCCC---CCCCCCCCC-CCcccc
Confidence 367777644331 25889999997654 44666667777665 8999999999 554431110 011113
Q ss_pred chhhHHHHHHHHHHcCCCCC-ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCC----------CC-
Q 005093 540 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----------IP- 607 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~----------~~- 607 (715)
..++..+.+..+++.- +. ++++|+|||+||.+++.++.++|++++++|+++|............ ..
T Consensus 81 ~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T 1mj5_A 81 AYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQA 158 (302)
T ss_dssp CHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTT
T ss_pred cHHHHHHHHHHHHHHh--CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccc
Confidence 4666666666666652 34 7899999999999999999999999999999988653110000000 00
Q ss_pred C------c-eeeeccCCCCCCCCCCCCChhhHHH------------------HHhc--------------CchhhccCCC
Q 005093 608 D------W-CYVESYGSKGKDSFTESPSVEDLTR------------------FHSK--------------SPISHISKVK 648 (715)
Q Consensus 608 ~------~-~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--------------sp~~~~~~i~ 648 (715)
. . .+...+... ........+.... +... +....+.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 235 (302)
T 1mj5_A 159 GEELVLQDNVFVEQVLPG---LILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESP 235 (302)
T ss_dssp HHHHHTTTCHHHHTHHHH---TSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhcChHHHHHHHHHh---cCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccC
Confidence 0 0 000000000 0000000000000 0000 1123466789
Q ss_pred CcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHh
Q 005093 649 TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 713 (715)
Q Consensus 649 ~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 713 (715)
+|+|+++|++|.++|++.+..+.+.+ .. +++++ ++||.+... ...++.+.|.+|+++.
T Consensus 236 ~P~l~i~g~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~e-~p~~~~~~i~~fl~~~ 293 (302)
T 1mj5_A 236 IPKLFINAEPGALTTGRMRDFCRTWP----NQ-TEITV-AGAHFIQED-SPDEIGAAIAAFVRRL 293 (302)
T ss_dssp SCEEEEEEEECSSSSHHHHHHHTTCS----SE-EEEEE-EESSCGGGT-CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCChHHHHHHHHhc----CC-ceEEe-cCcCccccc-CHHHHHHHHHHHHHhh
Confidence 99999999999999987666554433 33 78888 999986644 4568889999999875
No 211
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.62 E-value=1.8e-16 Score=160.15 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=129.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|+||++||.+.......|...+..|+ +||.|+++|+|| +|.+.. .......++++.+.+..+++.. ..+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G---~G~S~~----~~~~~~~~~~~~~~l~~~l~~~--~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPN---SGYSPV----SNQANVGLRDWVNAILMIFEHF--KFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTT---STTSCC----CCCTTCCHHHHHHHHHHHHHHS--CCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCC---CCCCCC----CCcccccHHHHHHHHHHHHHHh--CCC
Confidence 389999997434333446777777776 799999999999 555431 1122235777777777776663 346
Q ss_pred eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhccCCCCCCcee---eeccCC---------CCCCCCCCCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY---VESYGS---------KGKDSFTESPS 628 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~ 628 (715)
++.|+|||+||.+++.+|.++|++++++|+++|.................. ...... ...........
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQ 190 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHH
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHH
Confidence 999999999999999999999999999999996543222111000000000 000000 00000000000
Q ss_pred h--------hhHHHHHhcCc---------------hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEE
Q 005093 629 V--------EDLTRFHSKSP---------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 685 (715)
Q Consensus 629 ~--------~~~~~~~~~sp---------------~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~ 685 (715)
. .....+....+ ...+.+ ++|+|+++|++|..++++ + .+.+.+ ...+ ++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~----~~~~-~~ 262 (292)
T 3l80_A 191 FKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKH----TQTK-LI 262 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCC----TTCE-EE
T ss_pred HHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccC----CCce-ee
Confidence 0 00011111111 123345 799999999999988776 4 443222 3356 89
Q ss_pred eCCCCccCCCCCchHHHHHHHHHHHHHhc
Q 005093 686 FPNDVHGIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 686 ~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
++++||.+... ...++.+.|.+||+++-
T Consensus 263 ~~~~gH~~~~e-~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 263 LCGQHHYLHWS-ETNSILEKVEQLLSNHE 290 (292)
T ss_dssp ECCSSSCHHHH-CHHHHHHHHHHHHHTCT
T ss_pred eCCCCCcchhh-CHHHHHHHHHHHHHhcc
Confidence 99999976543 34578899999998763
No 212
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.62 E-value=6.5e-14 Score=147.83 Aligned_cols=266 Identities=13% Similarity=0.086 Sum_probs=172.6
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 92 (715)
....|+++|+.++.. .+..... ..+...+|||||++|++....+ ..+...+ .+++..+.......+
T Consensus 10 ~d~~v~v~d~~~~~~--~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v--- 76 (391)
T 1l0q_A 10 ESDNISVIDVTSNKV--TATIPVG-----SNPMGAVISPDGTKVYVANAHS---NDVSIIDTATNNVIATVPAGSSP--- 76 (391)
T ss_dssp TTTEEEEEETTTTEE--EEEEECS-----SSEEEEEECTTSSEEEEEEGGG---TEEEEEETTTTEEEEEEECSSSE---
T ss_pred CCCEEEEEECCCCeE--EEEeecC-----CCcceEEECCCCCEEEEECCCC---CeEEEEECCCCeEEEEEECCCCc---
Confidence 345677766654421 2111111 3478899999999987765432 1454444 466655555443333
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
..+.|||||++|++.... ...|++||++++
T Consensus 77 -------~~~~~spdg~~l~~~~~~-------------------------------------------~~~v~v~d~~~~ 106 (391)
T 1l0q_A 77 -------QGVAVSPDGKQVYVTNMA-------------------------------------------SSTLSVIDTTSN 106 (391)
T ss_dssp -------EEEEECTTSSEEEEEETT-------------------------------------------TTEEEEEETTTT
T ss_pred -------cceEECCCCCEEEEEECC-------------------------------------------CCEEEEEECCCC
Confidence 789999999999886322 267999999998
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
+.... .........++|+|||+. |+++.. ....|+++|+ .+++
T Consensus 107 ~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~~--------------~~~~v~~~d~-----------------~~~~ 149 (391)
T 1l0q_A 107 TVAGT--VKTGKSPLGLALSPDGKK----LYVTNN--------------GDKTVSVINT-----------------VTKA 149 (391)
T ss_dssp EEEEE--EECSSSEEEEEECTTSSE----EEEEET--------------TTTEEEEEET-----------------TTTE
T ss_pred eEEEE--EeCCCCcceEEECCCCCE----EEEEeC--------------CCCEEEEEEC-----------------CCCc
Confidence 87665 233445678999999998 766652 2347999997 5555
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
.............+.|+|||++|++....+ ..|+++|+.+++....... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~----------~~v~~~d~~~~~~~~~~~~-------------~------- 199 (391)
T 1l0q_A 150 VINTVSVGRSPKGIAVTPDGTKVYVANFDS----------MSISVIDTVTNSVIDTVKV-------------E------- 199 (391)
T ss_dssp EEEEEECCSSEEEEEECTTSSEEEEEETTT----------TEEEEEETTTTEEEEEEEC-------------S-------
T ss_pred EEEEEecCCCcceEEECCCCCEEEEEeCCC----------CEEEEEECCCCeEEEEEec-------------C-------
Confidence 544433344567899999999887665442 3589999877543211100 0
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
..+..+.|+|||+.+++.........|+.+|+.+++...............++++++.++++.... ..|.+.++.++
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 012356799999988877654456789999999888766554443334457888888887665322 45777777654
No 213
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.62 E-value=1.9e-15 Score=154.80 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=82.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccc
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 540 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~ 540 (715)
+|..++.... +.++.|.||++||.+.. ...|...+..|++. |.|+++|+|| +|.+... ......
T Consensus 29 ~g~~l~y~~~------G~g~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---hG~S~~~----~~~~~~ 92 (318)
T 2psd_A 29 LDSFINYYDS------EKHAENAVIFLHGNATS--SYLWRHVVPHIEPV-ARCIIPDLIG---MGKSGKS----GNGSYR 92 (318)
T ss_dssp TTEEEEEEEC------CSCTTSEEEEECCTTCC--GGGGTTTGGGTTTT-SEEEEECCTT---STTCCCC----TTSCCS
T ss_pred CCeEEEEEEc------CCCCCCeEEEECCCCCc--HHHHHHHHHHhhhc-CeEEEEeCCC---CCCCCCC----CCCccC
Confidence 5666653321 22344689999997654 45677777777654 7999999999 6655321 112234
Q ss_pred hhhHHHHHHHHHHcCCCCC-ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCC
Q 005093 541 VNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 593 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 593 (715)
+++..+.+..+++.- +. +++.|+||||||.+++.+|.++|++++++|++++
T Consensus 93 ~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 93 LLDHYKYLTAWFELL--NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp HHHHHHHHHHHHTTS--CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhc--CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 667777777666653 34 7899999999999999999999999999998764
No 214
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.40 E-value=4.9e-17 Score=165.05 Aligned_cols=109 Identities=17% Similarity=0.330 Sum_probs=76.5
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
+.|.||++||.+.. ...|...+..|+ +||.|+++|+|| +|.+..............+++.+.+..+++. .+.
T Consensus 24 ~~p~vv~lHG~~~~--~~~~~~~~~~l~-~g~~v~~~D~~G---~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~--l~~ 95 (304)
T 3b12_A 24 SGPALLLLHGFPQN--LHMWARVAPLLA-NEYTVVCADLRG---YGGSSKPVGAPDHANYSFRAMASDQRELMRT--LGF 95 (304)
Confidence 45789999996654 446777778887 899999999999 5554322100001122233444444333333 234
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcch
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 596 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 596 (715)
++++|+|||+||.+++.+|.++|++++++|+++|...
T Consensus 96 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 96 ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 6899999999999999999999999999999998654
No 215
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.59 E-value=7e-13 Score=137.56 Aligned_cols=239 Identities=5% Similarity=-0.007 Sum_probs=151.2
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
.....+|||||++|++....+ ..++.++ .+++....+..................+.|||||++|++....
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----- 161 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVN---SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----- 161 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTT---TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----
T ss_pred CcceEEECCCCCEEEEEecCC---CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-----
Confidence 356789999999887765532 3676666 5666655555432210000000012578999999988775421
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
....|+++|+++++..... .........+.|+|||+. +
T Consensus 162 -------------------------------------~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~s~dg~~----l 199 (353)
T 3vgz_A 162 -------------------------------------KESVIWVVDGGNIKLKTAI-QNTGKMSTGLALDSEGKR----L 199 (353)
T ss_dssp -------------------------------------SSCEEEEEETTTTEEEEEE-CCCCTTCCCCEEETTTTE----E
T ss_pred -------------------------------------CCceEEEEcCCCCceEEEe-cCCCCccceEEECCCCCE----E
Confidence 1266999999998876552 112334667899999997 6
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee-cCC----CCccccceeEcCCCCeEEE
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTE----SISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lt~----~~~~~~~~~~spdg~~l~~ 277 (715)
++.. ....|+++|+ .+++... +.. .........|+|||++|+.
T Consensus 200 ~~~~---------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 200 YTTN---------------ADGELITIDT-----------------ADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EEEC---------------TTSEEEEEET-----------------TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred EEEc---------------CCCeEEEEEC-----------------CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 6654 2247889997 5555432 222 1223456899999998866
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
..... ..|+++|+.+++.... .. .. ....+.|+|||+.++++.... .
T Consensus 248 ~~~~~----------~~v~~~d~~~~~~~~~-------~~---~~-----------~~~~~~~s~dg~~l~v~~~~~--~ 294 (353)
T 3vgz_A 248 TDSKA----------AEVLVVDTRNGNILAK-------VA---AP-----------ESLAVLFNPARNEAYVTHRQA--G 294 (353)
T ss_dssp EESSS----------SEEEEEETTTCCEEEE-------EE---CS-----------SCCCEEEETTTTEEEEEETTT--T
T ss_pred EeCCC----------CEEEEEECCCCcEEEE-------EE---cC-----------CCceEEECCCCCEEEEEECCC--C
Confidence 65432 4699999877553211 00 00 123567999999877765433 4
Q ss_pred EEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeC
Q 005093 358 VIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 358 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
.|+.+|+.+++...............|+++++.++++...
T Consensus 295 ~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 295 KVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred eEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 7888999998877665544433446788899888877655
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.59 E-value=6.8e-14 Score=159.13 Aligned_cols=267 Identities=12% Similarity=0.136 Sum_probs=168.3
Q ss_pred eEEeeCCCCceEEEEecCCCCC-CeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENES-PIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
..+.++++|.++.|..+.++.. ..+|.....+..+-+++......+. ...+.+++|||||++|||.....
T Consensus 80 ~~~~p~~~g~~~y~~~~~~~~~~~~~~r~~~~~~~~vllD~n~la~~~---~~~l~~~~~SpDg~~lAy~~~~~------ 150 (693)
T 3iuj_A 80 KEGAPFREGRYHYFFKNDGLQNQNVLWRQQEGKPAEVFLDPNTLSPDG---TTALDQLSFSRDGRILAYSLSLA------ 150 (693)
T ss_dssp EECCCEEETTEEEEEEECSSCSSCEEEEECTTSCCEEEECGGGGSTTS---CCEEEEEEECTTSSEEEEEEECS------
T ss_pred cCCCCEEECCEEEEEEEcCCCceeEEEEeCCCCCcEEEEehhhccCCC---cEEEEEEEECCCCCEEEEEEecC------
Confidence 3445678999999988765332 2344433344444455542211111 11447889999999999987653
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 204 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~ 204 (715)
|. ....|+++|+++|+.... .........++|| ||+. |+|
T Consensus 151 ----------------------------G~-----~~~~i~v~dl~tg~~~~~--~~~~~k~~~~~Ws-Dg~~----l~y 190 (693)
T 3iuj_A 151 ----------------------------GS-----DWREIHLMDVESKQPLET--PLKDVKFSGISWL-GNEG----FFY 190 (693)
T ss_dssp ----------------------------SC-----CEEEEEEEETTTCSEEEE--EEEEEESCCCEEE-TTTE----EEE
T ss_pred ----------------------------CC-----ceEEEEEEECCCCCCCcc--ccCCceeccEEEe-CCCE----EEE
Confidence 11 237899999999997665 2222224578999 9999 999
Q ss_pred EeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC--ceecCCCCc----cccceeEcCCCCeEEEE
Q 005093 205 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP--VVNLTESIS----SAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 205 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lt~~~~----~~~~~~~spdg~~l~~~ 278 (715)
++..... .+-....++..+||++++ .++. -+.+..... ....+.|||||++|++.
T Consensus 191 ~~~~~~~--~~~~~~~~~~~~v~~~~l-----------------gt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~ 251 (693)
T 3iuj_A 191 SSYDKPD--GSELSARTDQHKVYFHRL-----------------GTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLIS 251 (693)
T ss_dssp EESSCCC---------CCCCEEEEEET-----------------TSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEE
T ss_pred EEecCcc--cccccccCCCcEEEEEEC-----------------CCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEE
Confidence 8754210 000111235568999997 4333 234444333 35679999999999998
Q ss_pred ecCCCCCCCCccccceeEeeecCCCC--CCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCC-
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS- 355 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~- 355 (715)
+... ....+||++|+.+++ .+.++...+ .....|+++|+.++|.+..++
T Consensus 252 ~~~~-------~~~~~i~~~d~~~~~~~~~~l~~~~~---------------------~~~~~~~~~g~~l~~~t~~~~~ 303 (693)
T 3iuj_A 252 AANS-------TSGNRLYVKDLSQENAPLLTVQGDLD---------------------ADVSLVDNKGSTLYLLTNRDAP 303 (693)
T ss_dssp EESS-------SSCCEEEEEETTSTTCCCEEEECSSS---------------------SCEEEEEEETTEEEEEECTTCT
T ss_pred EccC-------CCCcEEEEEECCCCCCceEEEeCCCC---------------------ceEEEEeccCCEEEEEECCCCC
Confidence 8764 123589999997753 233322110 011127788888999887543
Q ss_pred eeEEEEEECCCCcE---EEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 356 SQVIISVNVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 356 ~~~l~~~d~~tg~~---~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
..+|+.+|++++.. +.+++..... . .++++++.|++....... ++|+++++.+
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g~-~~l~~~d~~g 359 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDAT-ARVEQFDYEG 359 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETTE-EEEEEECTTS
T ss_pred CCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECCe-eEEEEEECCC
Confidence 57899999988765 6777665533 3 899999999887654433 4677777653
No 217
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.57 E-value=9.2e-13 Score=135.47 Aligned_cols=273 Identities=11% Similarity=0.095 Sum_probs=163.4
Q ss_pred cccccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCcc-EEEEecC
Q 005093 9 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVP 86 (715)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 86 (715)
+..+.....|.++|+.++.. ....... .... .++|||||++|++....+ ..++.++ .+++. .......
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~--~~~~~~~----~~~~-~~~~s~dg~~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEI--LNQITLG----YDFV-DTAITSDCSNVVVTSDFC---QTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCE--EEEEECC----CCEE-EEEECSSSCEEEEEESTT---CEEEEEECSSSSCEEEEEEEC
T ss_pred EEEecCCCeEEEEeCcccce--eeeEEcc----CCcc-eEEEcCCCCEEEEEeCCC---CeEEEEECCCCceeEEecccC
Confidence 34445556777876655432 2221111 1334 889999999887765532 2677777 55654 4333332
Q ss_pred ccccccccCCCcccc-eeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEE
Q 005093 87 QTVHGSVYADGWFEG-ISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLF 165 (715)
Q Consensus 87 ~~~~~~~~~~~~~~~-~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (715)
... .. +.|||||++|+ +.... + ....|+
T Consensus 83 ~~~----------~~~~~~s~dg~~l~-~~~~~----------------------------------~------~~~~i~ 111 (331)
T 3u4y_A 83 QSS----------MADVDITPDDQFAV-TVTGL----------------------------------N------HPFNMQ 111 (331)
T ss_dssp SSC----------CCCEEECTTSSEEE-ECCCS----------------------------------S------SSCEEE
T ss_pred CCC----------ccceEECCCCCEEE-EecCC----------------------------------C------CcccEE
Confidence 332 45 99999999998 43211 0 114899
Q ss_pred EEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCce-EEEEecccccchhhhhhhh
Q 005093 166 VININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELK 244 (715)
Q Consensus 166 ~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~ 244 (715)
+||+++++.... .........++|+|||+. |+++.... .. |++++++
T Consensus 112 v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~~~~~~~--------------~~~i~~~~~~------------ 159 (331)
T 3u4y_A 112 SYSFLKNKFIST--IPIPYDAVGIAISPNGNG----LILIDRSS--------------ANTVRRFKID------------ 159 (331)
T ss_dssp EEETTTTEEEEE--EECCTTEEEEEECTTSSC----EEEEEETT--------------TTEEEEEEEC------------
T ss_pred EEECCCCCeEEE--EECCCCccceEECCCCCE----EEEEecCC--------------CceEEEEEEC------------
Confidence 999999887655 233334578999999998 77765211 13 5655541
Q ss_pred ccCCCCCCc----eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 245 ESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 245 ~~~~~~~~~----~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
..+.. ............+.|||||++|++..... ..|+++|+.+++.... +..+.
T Consensus 160 ----~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~d~~~~~~~~~-------~~~~~ 218 (331)
T 3u4y_A 160 ----ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG----------NSIGILETQNPENITL-------LNAVG 218 (331)
T ss_dssp ----TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT----------TEEEEEECSSTTSCEE-------EEEEE
T ss_pred ----CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC----------CeEEEEECCCCcccce-------eeecc
Confidence 22222 12222233467789999999887776543 3588999876554110 00000
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC---C----CCCc---eeEEEeecCCE
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP---A----ESNF---SWSLLTLDGDN 390 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~---~----~~~~---~~~~~s~~~~~ 390 (715)
.. ..+..+.|+|||+.++++.. +...|+.+|+.+++.+.+.. . .... ....|+++++.
T Consensus 219 ~~----------~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 286 (331)
T 3u4y_A 219 TN----------NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETK 286 (331)
T ss_dssp CS----------SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSE
T ss_pred CC----------CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCE
Confidence 00 13457789999998776543 44568899999998744421 1 1101 12478999998
Q ss_pred EEEEEeCCCCCCeEEEEeec
Q 005093 391 IIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 391 l~~~~~~~~~p~~l~~~~~~ 410 (715)
|+++... ...|.+.++.
T Consensus 287 l~v~~~~---~~~v~v~d~~ 303 (331)
T 3u4y_A 287 LFISANI---SRELKVFTIS 303 (331)
T ss_dssp EEEEETT---TTEEEEEETT
T ss_pred EEEecCC---CCcEEEEEec
Confidence 8776643 2347777764
No 218
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.56 E-value=2.9e-13 Score=139.29 Aligned_cols=290 Identities=11% Similarity=0.010 Sum_probs=166.3
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCc-ccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ-TVH 90 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~ 90 (715)
.....|+++|+.+... .+.. ++....+....++|||||++|++.... ...++.++ .+++....+.... ..+
T Consensus 8 ~~~~~v~~~d~~~~~~--~~~~--~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAV--DKVI--TIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp ETTTEEEEEETTTTEE--EEEE--ECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred CCCCeEEEEECCCCcE--EEEE--EcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECCCCCeEeeEEcCCcccc
Confidence 3445677776654321 1111 111100036778999999998776543 23577666 5666555444322 000
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
+ .....+.|||||++|++....... .+++.. .....|+++|++
T Consensus 81 ~-----~~~~~~~~s~dg~~l~~~~~~~~~----------------------------~~~~~~----~~~~~i~v~d~~ 123 (337)
T 1pby_B 81 V-----KSLFGAALSPDGKTLAIYESPVRL----------------------------ELTHFE----VQPTRVALYDAE 123 (337)
T ss_dssp E-----ECTTCEEECTTSSEEEEEEEEEEE----------------------------CSSCEE----ECCCEEEEEETT
T ss_pred c-----ccccceEECCCCCEEEEEeccccc----------------------------cccccc----ccCceEEEEECC
Confidence 0 012689999999999887432100 000000 012779999999
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
+++.... .........+.|+|||+. |++.. ..|+++|+ .+
T Consensus 124 ~~~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~-----------------~~i~~~d~-----------------~~ 163 (337)
T 1pby_B 124 TLSRRKA--FEAPRQITMLAWARDGSK----LYGLG-----------------RDLHVMDP-----------------EA 163 (337)
T ss_dssp TTEEEEE--EECCSSCCCEEECTTSSC----EEEES-----------------SSEEEEET-----------------TT
T ss_pred CCcEEEE--EeCCCCcceeEECCCCCE----EEEeC-----------------CeEEEEEC-----------------CC
Confidence 8876544 222334667899999998 77762 26889997 55
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecCCCCC-------------CCCccccceeEeeecCCCCCCCcccceeeeee
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVD-------------SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 317 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~-------------~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~ 317 (715)
++...............|+|||++|++........ ..+......|+++|+.+++...+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----- 238 (337)
T 1pby_B 164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI----- 238 (337)
T ss_dssp TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE-----
T ss_pred CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC-----
Confidence 55443332222233558999999886554332100 000001125788888775542111000
Q ss_pred ceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeC
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
....+..+.|+|||+.+++. ...|+.+|+++++...............|+++++.+++. .
T Consensus 239 -------------~~~~~~~~~~s~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~- 298 (337)
T 1pby_B 239 -------------MDVFYFSTAVNPAKTRAFGA-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-G- 298 (337)
T ss_dssp -------------CSSCEEEEEECTTSSEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-S-
T ss_pred -------------CCCceeeEEECCCCCEEEEe-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-c-
Confidence 00122356899999987766 358999999998876554433333446788998877764 2
Q ss_pred CCCCCeEEEEeecccC
Q 005093 398 PVDVPQVKYGYFVDKA 413 (715)
Q Consensus 398 ~~~p~~l~~~~~~~~~ 413 (715)
....|.++++.+++
T Consensus 299 --~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 299 --ALGDLAAYDAETLE 312 (337)
T ss_dssp --BSSEEEEEETTTCC
T ss_pred --CCCcEEEEECcCCc
Confidence 24568888876543
No 219
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.55 E-value=2.7e-13 Score=136.02 Aligned_cols=236 Identities=13% Similarity=0.174 Sum_probs=165.1
Q ss_pred eeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccC
Q 005093 49 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 127 (715)
Q Consensus 49 ~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~ 127 (715)
.+++||.+|+|.... +...+|.+. +++..++++.. ..-.++++|++|+|+.........
T Consensus 20 ~~~~~g~~iy~~n~~--d~~~ly~~~~dg~~~~~l~~~--------------~~~~i~~~g~~Iyy~~~~~~~~~~---- 79 (302)
T 3s25_A 20 LFCESDGEVFFSNTN--DNGRLYAMNIDGSNIHKLSND--------------TAMYINADKNYVYYVRNNNQKITS---- 79 (302)
T ss_dssp CEEEETTEEEEEEGG--GTTEEEEEETTSCSCEEEEEE--------------EEEEEEECSSEEEEEEECC---------
T ss_pred EEEEeCCEEEEEeCC--CCceEEEEcCCCCCCEEccCC--------------ceeeEEEcCCEEEEEECCCCcccc----
Confidence 356899999998764 345899999 66677777653 134568999999999765421100
Q ss_pred CCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEee
Q 005093 128 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGW 207 (715)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~ 207 (715)
..+....+..||.+++++++.++|. ... ...|+|+|++ |+|+..
T Consensus 80 --------------------------~~~~~~n~~~Iy~i~~dg~~~~~l~--~~~----~~~~s~~g~~----Iy~~~~ 123 (302)
T 3s25_A 80 --------------------------QTFFSYDRNSLCRIKRNGHGSTVLD--PDP----CIYASLIGNY----IYYLHY 123 (302)
T ss_dssp ---------------------------CCSSCCSEEEEEEETTSCCCEEEE--CSC----EEEEEEETTE----EEEEEE
T ss_pred --------------------------cceeccCCCeEEEEeCCCCcceEee--cCC----ccEEEEeCCE----EEEEee
Confidence 0111113478999999999988883 221 2379999999 999862
Q ss_pred cCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCC
Q 005093 208 SSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSG 287 (715)
Q Consensus 208 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g 287 (715)
.. .....||++++ ++...++|+.... +.|+|+|++|+|++..
T Consensus 124 ~~-----------~~~~~Iy~~~~-----------------dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g------ 165 (302)
T 3s25_A 124 DT-----------QTATSLYRIRI-----------------DGEEKKKIKNHYL----FTCNTSDRYFYYNNPK------ 165 (302)
T ss_dssp SS-----------SSCEEEEEEET-----------------TSCCCEEEESSCC----CCSEEETTEEEEECTT------
T ss_pred cC-----------CCCceEEEEEC-----------------CCCCeEEEeCCCc----eEeeEECCEEEEEeCC------
Confidence 11 12347999998 7777888887644 5579999999999862
Q ss_pred CccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCC
Q 005093 288 AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSG 367 (715)
Q Consensus 288 ~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg 367 (715)
..+||++++.++..+.|..+. ... ++.|+++.|+++....+ ..|++++++++
T Consensus 166 ----~~~Iy~~~l~g~~~~~l~~~~----------------------~~~-~~~P~g~~iy~t~~~~~-~~I~~~~ldG~ 217 (302)
T 3s25_A 166 ----NGQLYRYDTASQSEALFYDCN----------------------CYK-PVVLDDTNVYYMDVNRD-NAIVHVNINNP 217 (302)
T ss_dssp ----TCCEEEEETTTTEEEEEECSC----------------------EEE-EEEEETTEEEEEEGGGT-TEEEEECSSSC
T ss_pred ----CceEEEEECCCCCEEEEeCCC----------------------ccc-eeeecCCEEEEEEcCCC-cEEEEEECCCC
Confidence 246999999887655443211 011 24589999998765433 79999999999
Q ss_pred cEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 368 ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 368 ~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
..+.|+... ...+++++++|++...... ..|++++++..
T Consensus 218 ~~~~Lt~~~----~~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~ 256 (302)
T 3s25_A 218 NPVVLTEAN----IEHYNVYGSLIFYQRGGDN--PALCVVKNDGT 256 (302)
T ss_dssp CCEECSCSC----EEEEEEETTEEEEEECSSS--CEEEEEETTSC
T ss_pred CeEEEeCCC----cceEEECCCEEEEEECCCC--cEEEEEECCCC
Confidence 988887543 2568999999988754433 78999988644
No 220
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.55 E-value=1.9e-13 Score=156.39 Aligned_cols=250 Identities=12% Similarity=0.117 Sum_probs=158.0
Q ss_pred CCCCceEEEEecCCCCC-CeEEEEec---CCc---cEEEEecCcc-c-cccccCCCcccceeec-CCCCeEEEEeecCCC
Q 005093 51 SPSGSKLLVVRNPENES-PIQFELWS---QSQ---LEKEFHVPQT-V-HGSVYADGWFEGISWN-SDETLIAYVAEEPSP 120 (715)
Q Consensus 51 Spdg~~la~~~~~~~~~-~~~~~~~~---~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~wS-pDg~~la~~~~~~~~ 120 (715)
.++|.+++|+++.++.. ..++.... .+. .+.+++.... . ++. -....++|| |||++|||.....
T Consensus 123 ~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~----~~~~~~~~S~PDG~~lAy~~~~~-- 196 (751)
T 2xe4_A 123 YVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAF----CDVMEVKPAPPEHDLVAFSVDMS-- 196 (751)
T ss_dssp EEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSC----CEEEEEEECTTTTCEEEEEEESS--
T ss_pred eEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCe----EEEeeeEecCCCCCEEEEEEeCC--
Confidence 47999999998876443 34554444 443 3444443111 0 111 023679999 9999999987653
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC-ceEeecCCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g-~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
|. ...+||++|+++| +. +. ..-......++|||||+.
T Consensus 197 --------------------------------G~-----~~~~l~v~dl~~g~~~--l~-~~~~~~~~~~~WspDg~~-- 234 (751)
T 2xe4_A 197 --------------------------------GN-----EVYTIEFKRISDPSQT--IA-DKVSGTNGEIVWGPDHTS-- 234 (751)
T ss_dssp --------------------------------SS-----SCEEEEEEETTCTTCC--CC-CCEEEECSCCEECSSTTE--
T ss_pred --------------------------------CC-----ceEEEEEEECCCCCEe--CC-ccccCceeeEEEecCCCE--
Confidence 11 2367999999999 62 21 000112457899999999
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc--eecC--CCCccccceeEcCCCCeE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLT--ESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~lt--~~~~~~~~~~~spdg~~l 275 (715)
|+|+..... .+..+||++++ .++.. +.+. ........+.|||||++|
T Consensus 235 --l~y~~~d~~----------~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l 285 (751)
T 2xe4_A 235 --LFYVTKDET----------LRENKVWRHVM-----------------GKLQSEDVCLYEEHNPLFSAFMYKAADTNTL 285 (751)
T ss_dssp --EEEEEECTT----------CCEEEEEEEET-----------------TSCGGGCEEEEECCCTTCEEEEEECTTSSEE
T ss_pred --EEEEEECCC----------CCCCEEEEEEC-----------------CCCchhcEEEEecCCCceEEEEEECCCCCEE
Confidence 999874221 12348999997 44432 2332 222345678999999999
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCC--C--CCcccceeeeeeceecCCCCCccccccCCCCCCccccC---CCEEE
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNG--N--FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD---GCTML 348 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~--~--~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d---g~~l~ 348 (715)
+|.+... ...+||++|+.++. . +.++.. .....|+++ |+.|+
T Consensus 286 ~~~~~~~--------~~~~l~~~d~~~~~~~~~~~~l~~~-----------------------~~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 286 CIGSQSP--------ETAEVHLLDLRKGNAHNTLEIVRPR-----------------------EKGVRYDVQMHGTSHLV 334 (751)
T ss_dssp EEEEECS--------SCEEEEEEESSSCTTCCCEEESSCC-----------------------CTTCCEEEEEETTTEEE
T ss_pred EEEecCC--------CCceEEEEECCCCCCCceeEEeecC-----------------------CCCceEEEeeeeCCEEE
Confidence 9998653 24689999998753 2 222211 112345555 88898
Q ss_pred EEeeeC--CeeEEEEEECCC-CcEEE-ecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 349 LSSIWG--SSQVIISVNVSS-GELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 349 ~~~~~~--~~~~l~~~d~~t-g~~~~-l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
+.+... +..+||.+++++ ++.+. +...........++..++.|++.... ....+|+++++
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEE-TTEEEEEEEEC
T ss_pred EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEe-CCEEEEEEEec
Confidence 888864 678999999976 45555 54444434445677778888776654 34567888885
No 221
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.55 E-value=1.5e-14 Score=144.66 Aligned_cols=215 Identities=15% Similarity=0.172 Sum_probs=124.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++||.+.+ ...|...+..|+ .+|.|+++|+|| ||.+... .....+++..+.+..+++. .+.+
T Consensus 27 ~p~vvllHG~~~~--~~~w~~~~~~L~-~~~rvia~DlrG---hG~S~~~-----~~~~~~~~~a~dl~~ll~~--l~~~ 93 (276)
T 2wj6_A 27 GPAILLLPGWCHD--HRVYKYLIQELD-ADFRVIVPNWRG---HGLSPSE-----VPDFGYQEQVKDALEILDQ--LGVE 93 (276)
T ss_dssp SCEEEEECCTTCC--GGGGHHHHHHHT-TTSCEEEECCTT---CSSSCCC-----CCCCCHHHHHHHHHHHHHH--HTCC
T ss_pred CCeEEEECCCCCc--HHHHHHHHHHHh-cCCEEEEeCCCC---CCCCCCC-----CCCCCHHHHHHHHHHHHHH--hCCC
Confidence 4789999996654 567888888886 569999999999 6665321 1123355555555444443 2357
Q ss_pred eEEEEEeChhHHHHHHHHhhC-CCceeEEEecCCcch-----hhh-hccCCCCCCce-----eeec-cCCCC--------
Q 005093 561 KVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCN-----LAL-MVGTTDIPDWC-----YVES-YGSKG-------- 619 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~~~~~-----~~~-~~~~~~~~~~~-----~~~~-~~~~~-------- 619 (715)
++.|+||||||.+++.+|.++ |++++++|++++... ... .........|. .... .....
T Consensus 94 ~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (276)
T 2wj6_A 94 TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHL 173 (276)
T ss_dssp SEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHH
T ss_pred ceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHHHHhhcccchHHHHHHH
Confidence 899999999999999999999 999999999875321 000 00000000010 0000 00000
Q ss_pred CCCCCCCCChhhH----H----HHH-hcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCC
Q 005093 620 KDSFTESPSVEDL----T----RFH-SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 690 (715)
Q Consensus 620 ~~~~~~~~~~~~~----~----~~~-~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 690 (715)
...... ...... . .+. ..++...+.++++|+|+++|..|...+. .....+.+.+.-...++++++++|
T Consensus 174 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~--~~~~~~~~~~~~p~a~~~~i~~~g 250 (276)
T 2wj6_A 174 LEEMAD-YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPE--YEKINSDFAEQHPWFSYAKLGGPT 250 (276)
T ss_dssp HTTTTT-CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHH--HHHHHHHHHHHCTTEEEEECCCSS
T ss_pred HHHhhh-cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchh--HHHHHHHHHhhCCCeEEEEeCCCC
Confidence 000000 000000 0 000 0123345677889999988754433221 111223343333468999999999
Q ss_pred ccCCCCCchHHHHHHHHHHHHH
Q 005093 691 HGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 691 H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
|....+ ...++.+.|.+||++
T Consensus 251 H~~~~e-~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 251 HFPAID-VPDRAAVHIREFATA 271 (276)
T ss_dssp SCHHHH-SHHHHHHHHHHHHHH
T ss_pred Cccccc-CHHHHHHHHHHHHhh
Confidence 976544 355788899999975
No 222
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.54 E-value=7e-14 Score=156.10 Aligned_cols=224 Identities=16% Similarity=0.115 Sum_probs=144.5
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCcccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVY 94 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (715)
...||.+++...+.. .+++..+ .....+|||||+.++|++... +...+|.+ .+|+.++++..+.
T Consensus 89 ~~~l~~~~~~~~g~~-~~l~~~~------~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~-~~g~~~~l~~~~~------- 152 (582)
T 3o4h_A 89 QHALFKVNTSRPGEE-QRLEAVK------PMRILSGVDTGEAVVFTGATE-DRVALYAL-DGGGLRELARLPG------- 152 (582)
T ss_dssp CEEEEEEETTSTTCC-EECTTSC------SBEEEEEEECSSCEEEEEECS-SCEEEEEE-ETTEEEEEEEESS-------
T ss_pred ceEEEEEeccCCCcc-ccccCCC------CceeeeeCCCCCeEEEEecCC-CCceEEEc-cCCcEEEeecCCC-------
Confidence 346777555213322 2443322 244679999999999987654 33333322 5666667665332
Q ss_pred CCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce
Q 005093 95 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV 174 (715)
Q Consensus 95 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~ 174 (715)
..+.|||||++|++.+.+.. ....||++|+++|+.
T Consensus 153 -----~~~~~spDG~~la~~~~~~~----------------------------------------~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 153 -----FGFVSDIRGDLIAGLGFFGG----------------------------------------GRVSLFTSNLSSGGL 187 (582)
T ss_dssp -----CEEEEEEETTEEEEEEEEET----------------------------------------TEEEEEEEETTTCCC
T ss_pred -----ceEEECCCCCEEEEEEEcCC----------------------------------------CCeEEEEEcCCCCCc
Confidence 37999999999999875431 125699999999999
Q ss_pred EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce
Q 005093 175 QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV 254 (715)
Q Consensus 175 ~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (715)
+.+ +........++|||||+. |+ .+..+ ...+||++|+ ++++.+
T Consensus 188 ~~l--~~~~~~~~~~~~SpDG~~----l~-~~~~~------------~~~~i~~~d~-----------------~~~~~~ 231 (582)
T 3o4h_A 188 RVF--DSGEGSFSSASISPGMKV----TA-GLETA------------REARLVTVDP-----------------RDGSVE 231 (582)
T ss_dssp EEE--CCSSCEEEEEEECTTSCE----EE-EEECS------------SCEEEEEECT-----------------TTCCEE
T ss_pred eEe--ecCCCccccceECCCCCE----EE-EccCC------------CeeEEEEEcC-----------------CCCcEE
Confidence 998 455556689999999998 87 43211 2237999997 777777
Q ss_pred ecCCCCcccccee--------EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCC
Q 005093 255 NLTESISSAFFPR--------FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 326 (715)
Q Consensus 255 ~lt~~~~~~~~~~--------~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~ 326 (715)
.++........+. ||||| +++|....+ +..+||.+ ++......+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~--------g~~~l~~~----g~~~~~~~~--------------- 283 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE--------GRSAVFID----GERVEAPQG--------------- 283 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET--------TEEEEEET----TEEECCCSS---------------
T ss_pred EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC--------CcEEEEEE----CCeeccCCC---------------
Confidence 5555555677788 99999 787777654 12345544 322111100
Q ss_pred ccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 327 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 327 ~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
.+..+.|+ ||+.++..+.......||.+|+.+ +.+++
T Consensus 284 -------~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 284 -------NHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp -------EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred -------ceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 12345688 887665555555567899999865 66665
No 223
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.54 E-value=1.3e-13 Score=144.43 Aligned_cols=121 Identities=16% Similarity=0.205 Sum_probs=92.7
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhC---------CcEEEEEcCCCCCCCchhhhh
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV---------GYSLLIVNYRGSLGFGEEALQ 530 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~---------G~~vi~~d~rG~~~~g~~~~~ 530 (715)
-+|..|+.....+. .+..|.||++||.+.+ ...|...+..|++. ||.|+++|+|| ||.+...
T Consensus 75 i~g~~i~~~~~~~~----~~~~~plll~HG~~~s--~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G---~G~S~~~ 145 (388)
T 4i19_A 75 IDGATIHFLHVRSP----EPDATPMVITHGWPGT--PVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG---FGLSGPL 145 (388)
T ss_dssp ETTEEEEEEEECCS----STTCEEEEEECCTTCC--GGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT---SGGGCCC
T ss_pred ECCeEEEEEEccCC----CCCCCeEEEECCCCCC--HHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCC---CCCCCCC
Confidence 37888987666553 2456789999997665 55788888888776 99999999999 6665421
Q ss_pred cCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 531 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 531 ~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
. .......++.+.+..+.+. +..++++++||||||.+++.+|.++|++++++++.+|..
T Consensus 146 ~----~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 146 K----SAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp S----SCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred C----CCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 1 1123467777777777665 344689999999999999999999999999999998643
No 224
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.54 E-value=1e-14 Score=146.43 Aligned_cols=213 Identities=11% Similarity=0.024 Sum_probs=118.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|.||++||.+.. ...|..++..|++ ||.|+++|+|| +|.+... .....+++..+.+..+++.. ...
T Consensus 50 ~~~~lvllHG~~~~--~~~~~~l~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~ 117 (280)
T 3qmv_A 50 APLRLVCFPYAGGT--VSAFRGWQERLGD-EVAVVPVQLPG---RGLRLRE-----RPYDTMEPLAEAVADALEEH-RLT 117 (280)
T ss_dssp CSEEEEEECCTTCC--GGGGTTHHHHHCT-TEEEEECCCTT---SGGGTTS-----CCCCSHHHHHHHHHHHHHHT-TCS
T ss_pred CCceEEEECCCCCC--hHHHHHHHHhcCC-CceEEEEeCCC---CCCCCCC-----CCCCCHHHHHHHHHHHHHHh-CCC
Confidence 34889999996654 5567888888876 99999999999 6665321 12233555555544444432 135
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCcee----EEEecCCcchhhhhcc-CCCCCCcee---eeccCCCC-----CCCCCCC
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDKFV----AAAARNPLCNLALMVG-TTDIPDWCY---VESYGSKG-----KDSFTES 626 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~~~----~~v~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~-----~~~~~~~ 626 (715)
+++.|+||||||.+++.+|.++|+++. .+++.+.......... ........+ ...+.... ...+...
T Consensus 118 ~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (280)
T 3qmv_A 118 HDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDR 197 (280)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCT
T ss_pred CCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHH
Confidence 789999999999999999999887665 6665544321110000 000000000 00000000 0000000
Q ss_pred CC---hhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCC-CCchHHH
Q 005093 627 PS---VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER-PQSDFES 702 (715)
Q Consensus 627 ~~---~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~-~~~~~~~ 702 (715)
.. ...........+ ..+.++++|+|+++|++|..++.+.+..+.+.+ ....+++++++ ||.... ++...++
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~~~~~~~ 272 (280)
T 3qmv_A 198 RLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYT---TGSFLRRHLPG-NHFFLNGGPSRDRL 272 (280)
T ss_dssp THHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGB---SSCEEEEEEEE-ETTGGGSSHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcChHHHHHHHHhc---CCceEEEEecC-CCeEEcCchhHHHH
Confidence 00 001111111111 124678899999999999999987766554433 23467778875 887654 2333334
Q ss_pred HHHHHHH
Q 005093 703 FLNIGLW 709 (715)
Q Consensus 703 ~~~i~~w 709 (715)
.+.|.+|
T Consensus 273 ~~~i~~~ 279 (280)
T 3qmv_A 273 LAHLGTE 279 (280)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 4444433
No 225
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.53 E-value=8.4e-14 Score=140.47 Aligned_cols=119 Identities=14% Similarity=0.200 Sum_probs=80.4
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCcc
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 539 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~ 539 (715)
.+|.+++.... +..|.||++||.+.. ...|...+..|+ .+|.|+++|+|| +|.+............
T Consensus 12 ~~~~~~~~~~~--------g~g~~~vllHG~~~~--~~~w~~~~~~l~-~~~~vi~~Dl~G---~G~s~~~~~~~~~~~~ 77 (291)
T 3qyj_A 12 TTEARINLVKA--------GHGAPLLLLHGYPQT--HVMWHKIAPLLA-NNFTVVATDLRG---YGDSSRPASVPHHINY 77 (291)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCC--GGGGTTTHHHHT-TTSEEEEECCTT---STTSCCCCCCGGGGGG
T ss_pred cCCeEEEEEEc--------CCCCeEEEECCCCCC--HHHHHHHHHHHh-CCCEEEEEcCCC---CCCCCCCCCCcccccc
Confidence 35677764322 234679999997654 556777777774 589999999999 6554321111001112
Q ss_pred chhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 540 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 540 ~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
..+++.+.+..+++.- ..+++.++||||||.+++.+|.++|++++++|++++.
T Consensus 78 ~~~~~~~~~~~~~~~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSKL--GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIA 130 (291)
T ss_dssp SHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCC
Confidence 3444444444444432 3468999999999999999999999999999998754
No 226
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.53 E-value=1.4e-15 Score=163.71 Aligned_cols=228 Identities=15% Similarity=0.141 Sum_probs=139.8
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHhCC-cEEEEEcCC-CCCCCchhhhhcCCCC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYR-GSLGFGEEALQSLPGK 535 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~~~~~~~la~~G-~~vi~~d~r-G~~~~g~~~~~~~~~~ 535 (715)
+.|.+ ...+|.|.. ..+++|+||++|||++..+.. ........|+++| ++|+.+||| |..+++...... ...
T Consensus 79 ~edcL--~l~v~~P~~--~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 79 SEDCL--YVNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CSCCC--EEEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCCC--EEEEEeCCC--CCCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 33444 446888874 234589999999988654332 2222345666665 999999999 332343221100 012
Q ss_pred CCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcchhhhhccCCCCCCce
Q 005093 536 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWC 610 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 610 (715)
.+...+.|+.++++|+.++. ..|+++|.|+|+|+||++++.++... +++|+++|+.+|...+......... ...
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~-~~~ 232 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAAST-AAA 232 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHH-HHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHH-HHH
Confidence 23334789999999998862 36899999999999999998887643 4789999999997632211000000 000
Q ss_pred eeeccCCC--CCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 611 YVESYGSK--GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 611 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
+...++.. ....+...+. + +.+...+++........|.+++++..|..+.+++..+++++.+.+++++.+-..++
T Consensus 233 ~~~~~g~~~~~~~~Lr~~~~-~--~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~ 309 (489)
T 1qe3_A 233 FLQVLGINESQLDRLHTVAA-E--DLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRD 309 (489)
T ss_dssp HHHHHTCCTTCGGGGGTSCH-H--HHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETT
T ss_pred HHHHcCCCHHHHHHHHcCCH-H--HHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecc
Confidence 01111211 1111111111 1 11112222211112335678889999999988988888888877889999999999
Q ss_pred CCccCCC
Q 005093 689 DVHGIER 695 (715)
Q Consensus 689 ~~H~~~~ 695 (715)
++|.+..
T Consensus 310 Eg~~~~~ 316 (489)
T 1qe3_A 310 EGYLFFT 316 (489)
T ss_dssp GGGGTCC
T ss_pred hhHhhcc
Confidence 9998764
No 227
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.53 E-value=1.9e-13 Score=139.81 Aligned_cols=105 Identities=23% Similarity=0.436 Sum_probs=72.7
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCC-ccchhhHHHHHHHHHHcCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~-~~~~~d~~~~i~~l~~~~~~ 557 (715)
..|.||++||++.+ ...|...+..|++ .+|.|+++|+|| ||.+.... ...+. ...++|+.++++.+... .
T Consensus 37 ~~p~lvllHG~~~~--~~~w~~~~~~L~~~~~~~via~Dl~G---hG~S~~~~-~~~~~~~~~a~dl~~~l~~l~~~--~ 108 (316)
T 3c5v_A 37 EGPVLLLLHGGGHS--ALSWAVFTAAIISRVQCRIVALDLRS---HGETKVKN-PEDLSAETMAKDVGNVVEAMYGD--L 108 (316)
T ss_dssp SSCEEEEECCTTCC--GGGGHHHHHHHHTTBCCEEEEECCTT---STTCBCSC-TTCCCHHHHHHHHHHHHHHHHTT--C
T ss_pred CCcEEEEECCCCcc--cccHHHHHHHHhhcCCeEEEEecCCC---CCCCCCCC-ccccCHHHHHHHHHHHHHHHhcc--C
Confidence 35789999997644 5578888888876 389999999999 66553211 01111 11244555555555321 1
Q ss_pred CCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCc
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 594 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~ 594 (715)
.+++.|+||||||.+++.+|.+ +|+ ++++|++++.
T Consensus 109 -~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 109 -PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp -CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred -CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 2689999999999999999985 466 9999998764
No 228
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.52 E-value=9e-13 Score=132.15 Aligned_cols=246 Identities=10% Similarity=0.071 Sum_probs=171.1
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCC----------CCCeEEEEe-cCCccEEEE
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN----------ESPIQFELW-SQSQLEKEF 83 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~----------~~~~~~~~~-~~~~~~~~~ 83 (715)
...||.++.++. +..+|+.. .+.-++|+|++|+|+..+.+ ....|+.+. ++++.++++
T Consensus 36 ~~~ly~~~~dg~--~~~~l~~~---------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~ 104 (302)
T 3s25_A 36 NGRLYAMNIDGS--NIHKLSND---------TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD 104 (302)
T ss_dssp TTEEEEEETTSC--SCEEEEEE---------EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE
T ss_pred CceEEEEcCCCC--CCEEccCC---------ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee
Confidence 357888665444 44555432 23456899999999987642 134688888 565655554
Q ss_pred ecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCce
Q 005093 84 HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 163 (715)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (715)
. . ....|+|+|++|+|...... ....
T Consensus 105 ~---~-----------~~~~~s~~g~~Iy~~~~~~~----------------------------------------~~~~ 130 (302)
T 3s25_A 105 P---D-----------PCIYASLIGNYIYYLHYDTQ----------------------------------------TATS 130 (302)
T ss_dssp C---S-----------CEEEEEEETTEEEEEEESSS----------------------------------------SCEE
T ss_pred c---C-----------CccEEEEeCCEEEEEeecCC----------------------------------------CCce
Confidence 3 2 24579999999999741100 2378
Q ss_pred EEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhh
Q 005093 164 LFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELEL 243 (715)
Q Consensus 164 l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (715)
||++++++.+.++|+ .... ..++|+|+. |+|+.. ...+||++++
T Consensus 131 Iy~~~~dGs~~~~lt--~~~~----~~~~~~g~~----iy~t~~--------------g~~~Iy~~~l------------ 174 (302)
T 3s25_A 131 LYRIRIDGEEKKKIK--NHYL----FTCNTSDRY----FYYNNP--------------KNGQLYRYDT------------ 174 (302)
T ss_dssp EEEEETTSCCCEEEE--SSCC----CCSEEETTE----EEEECT--------------TTCCEEEEET------------
T ss_pred EEEEECCCCCeEEEe--CCCc----eEeeEECCE----EEEEeC--------------CCceEEEEEC------------
Confidence 999999998888884 3322 346899999 999863 2247999997
Q ss_pred hccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCC
Q 005093 244 KESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE 323 (715)
Q Consensus 244 ~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~ 323 (715)
.++..++|..... ..| ++|+|++|+|+.... ..+|++++++++..+.|+....
T Consensus 175 -----~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~---------~~~I~~~~ldG~~~~~Lt~~~~---------- 227 (302)
T 3s25_A 175 -----ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNR---------DNAIVHVNINNPNPVVLTEANI---------- 227 (302)
T ss_dssp -----TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGG---------TTEEEEECSSSCCCEECSCSCE----------
T ss_pred -----CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCC---------CcEEEEEECCCCCeEEEeCCCc----------
Confidence 7777777765322 345 459999999987653 2579999999988777764321
Q ss_pred CCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCe
Q 005093 324 GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQ 403 (715)
Q Consensus 324 ~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~ 403 (715)
+.|+++++.|++..... ...|+++++++...++|.... ...++..+++|+++..... .
T Consensus 228 --------------~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG~~r~~l~~~~----~~~i~i~~d~Iy~td~~~~---~ 285 (302)
T 3s25_A 228 --------------EHYNVYGSLIFYQRGGD-NPALCVVKNDGTGFKELAKGE----FCNINVTSQYVYFTDFVSN---K 285 (302)
T ss_dssp --------------EEEEEETTEEEEEECSS-SCEEEEEETTSCCCEEEEESC----EEEEEECSSEEEEEETTTC---C
T ss_pred --------------ceEEECCCEEEEEECCC-CcEEEEEECCCCccEEeeCCc----cceEEEeCCEEEEEECCCC---e
Confidence 23788999998875533 379999999887788887653 2367788999999874333 3
Q ss_pred EEEEeec
Q 005093 404 VKYGYFV 410 (715)
Q Consensus 404 l~~~~~~ 410 (715)
|++..++
T Consensus 286 i~~~~~d 292 (302)
T 3s25_A 286 EYCTSTQ 292 (302)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 8887754
No 229
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.50 E-value=4.3e-13 Score=133.74 Aligned_cols=218 Identities=14% Similarity=0.142 Sum_probs=133.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcC--------CCCCCCchhhhhcC-
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQSL- 532 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~--------rG~~~~g~~~~~~~- 532 (715)
...+...+|+|++ ..++.|+||.+||+... ..+||+|+.+++ +|+.++|. |.+..
T Consensus 89 s~~~~~~i~lP~~--~~~p~Pvii~i~~~~~~-------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 89 SISFTVTITYPSS--GTAPYPAIIGYGGGSLP-------------APAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEEECCSS--SCSSEEEEEEETTCSSC-------------CCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eeEEEEEEECCCC--CCCCccEEEEECCCccc-------------cCCCeEEEEecccccccccCCCCcccee-cccccC
Confidence 3568889999974 35788999999985322 357999999986 55555665 33221
Q ss_pred -CCCCCccc--hhhHHHHHHHHHHcC--CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhc------
Q 005093 533 -PGKVGSQD--VNDVLTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------ 601 (715)
Q Consensus 533 -~~~~~~~~--~~d~~~~i~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~------ 601 (715)
...++... ..++.++|++|..++ .+|++||+++|||+||..++++++.. ++|+++|..++.++-....
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G~~~~R~~~~~ 231 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGGSACWRISDYL 231 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTTTSCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCchhhhhhhhhh
Confidence 22344333 358999999999987 89999999999999999999999975 5899999988654322111
Q ss_pred ---cCC-C-------CCCceeeeccCCCCCCCCCCCC---ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHH
Q 005093 602 ---GTT-D-------IPDWCYVESYGSKGKDSFTESP---SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG 667 (715)
Q Consensus 602 ---~~~-~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~ 667 (715)
+.. . ...|. ...+ ..+.... ..+..+...... ..|+|++.| .|..+++...
T Consensus 232 ~~~Ge~v~~~~~~~~e~~Wf-~~~~-----~~y~~~~~~lP~D~h~L~ALiA--------PRPllv~~g-~D~w~~~~g~ 296 (375)
T 3pic_A 232 KSQGANIQTASEIIGEDPWF-STTF-----NSYVNQVPVLPFDHHSLAALIA--------PRGLFVIDN-NIDWLGPQSC 296 (375)
T ss_dssp HHTTCCCCCHHHHTTTCSCS-CGGG-----GGTTTCGGGSSCCHHHHHHTST--------TSEEEEECC-CCGGGCHHHH
T ss_pred cccCccccccccccCccccc-ccch-----hhhcccccccCcCHHHHHHHhC--------CceEEEecC-CCcccCcHHH
Confidence 000 0 00111 0000 0010000 001111111111 258999999 9999988766
Q ss_pred HHHHHHH----HHcCC--cEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 668 LQYARAL----REKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 668 ~~~~~~l----~~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
...+.++ +..|. .+.+....+.+|... +. ...+++.+||++||+
T Consensus 297 ~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~f-p~---~~~~~~~~F~~k~L~ 346 (375)
T 3pic_A 297 FGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAF-PS---NQQSQLTAFVQKFLL 346 (375)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCC-CG---GGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCccceEEEeeCCCccccC-CH---HHHHHHHHHHHHHhC
Confidence 5444444 33455 455543323344222 22 234789999999985
No 230
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.50 E-value=3.4e-14 Score=144.57 Aligned_cols=208 Identities=14% Similarity=0.131 Sum_probs=130.6
Q ss_pred CCceEEEEEEecCCCCC-CCCCcEEEEEcCCCCCCCCccchHHHHHHHh------CCcEEEEEcCCCCCCCchhhhhc--
Q 005093 461 AQKPFEAIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQS-- 531 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~-~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~------~G~~vi~~d~rG~~~~g~~~~~~-- 531 (715)
-|.+.+.++|+|+++++ .+++|+|+++||... ..........++. .+++|++++... ...++...
T Consensus 22 l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~---f~~~~~~~~~l~~~~~~~~~~~IvV~i~~~~---R~~dytp~~~ 95 (331)
T 3gff_A 22 LKETREYVIALPEGYAQSLEAYPVVYLLDGEDQ---FDHMASLLQFLSQGTMPQIPKVIIVGIHNTN---RMRDYTPTHT 95 (331)
T ss_dssp TTEEEEEEEECCTTGGGSCCCEEEEEESSHHHH---HHHHHHHHHHHTCSSSCSSCCCEEEEECCSS---HHHHSCSSCC
T ss_pred CCCeEEEEEEeCCCCCCCCCCccEEEEecChhh---hHHHHHHHHHHHhhhhcCCCCEEEEEECCCC---cccccCCCcc
Confidence 36778899999999865 688999999999421 1112223445543 368899988621 11111000
Q ss_pred ------------CCCCCCccchhhHH--HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchh
Q 005093 532 ------------LPGKVGSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 597 (715)
Q Consensus 532 ------------~~~~~~~~~~~d~~--~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~ 597 (715)
.+...+.....+.. +.+.++.++..++..+ +|+||||||+++++++.++|++|+++++++|.+.+
T Consensus 96 ~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~ 174 (331)
T 3gff_A 96 LVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWF 174 (331)
T ss_dssp SBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTT
T ss_pred ccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhhheeeEeCchhcC
Confidence 00001111122222 3455666666566555 79999999999999999999999999999996421
Q ss_pred hhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCC-------cCCchHHHHH
Q 005093 598 ALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-------RVPVSNGLQY 670 (715)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~-------~v~~~~~~~~ 670 (715)
. .......... .+........|+++.+|+.|. .++.+.+.++
T Consensus 175 ~-----------------------------~~~~~~~~~~--~~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l 223 (331)
T 3gff_A 175 D-----------------------------SPHYLTLLEE--RVVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAF 223 (331)
T ss_dssp T-----------------------------TTHHHHHHHH--HHHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHH
T ss_pred C-----------------------------hHHHHHHHHH--HhhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHH
Confidence 1 0000111110 011112245799999999998 4667788999
Q ss_pred HHHHHHc---CCcEEEEEeCCCCccCCCCCchHHHHHHHHHHH
Q 005093 671 ARALREK---GVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 671 ~~~l~~~---g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 710 (715)
++.|++. |.++++.++|+++|+... ...+...++||
T Consensus 224 ~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~l 262 (331)
T 3gff_A 224 ADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHL 262 (331)
T ss_dssp HHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHH
T ss_pred HHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHH
Confidence 9999987 678999999999997542 23344444554
No 231
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.50 E-value=1e-11 Score=128.76 Aligned_cols=250 Identities=12% Similarity=0.119 Sum_probs=157.9
Q ss_pred cceEEeeCCCCceEEEEecCCC---CCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPEN---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
....+++||||++|++....+. ....++.++ .+++..+.+...... ..+.|+|||++|++....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~-- 109 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP----------FGATINNTTQTLWFGNTV-- 109 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC----------CSEEEETTTTEEEEEETT--
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc----------ceEEECCCCCEEEEEecC--
Confidence 4677899999999976654321 133566666 566666665554333 689999999988775332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCC--------CccceEEE
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS--------LSVGQVVW 191 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~--------~~~~~~~~ 191 (715)
...|+++|+++++.......... .....+.|
T Consensus 110 -----------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 110 -----------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp -----------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE
T ss_pred -----------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE
Confidence 25799999998886443101111 12466899
Q ss_pred ecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcC
Q 005093 192 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSP 270 (715)
Q Consensus 192 spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~sp 270 (715)
+|||+. +++.... ....|+++|+ .+++...... .......+.|+|
T Consensus 149 s~dg~~----l~~~~~~-------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 149 DDATNT----VYISGIG-------------KESVIWVVDG-----------------GNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp ETTTTE----EEEEEES-------------SSCEEEEEET-----------------TTTEEEEEECCCCTTCCCCEEET
T ss_pred CCCCCE----EEEEecC-------------CCceEEEEcC-----------------CCCceEEEecCCCCccceEEECC
Confidence 999997 6665421 2246999997 5665544333 333467899999
Q ss_pred CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEE
Q 005093 271 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 350 (715)
Q Consensus 271 dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~ 350 (715)
||++|++.... ..|+++|+.+++.... +....... ......+.|+|||+.+++.
T Consensus 195 dg~~l~~~~~~-----------~~i~~~d~~~~~~~~~----------~~~~~~~~-----~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 195 EGKRLYTTNAD-----------GELITIDTADNKILSR----------KKLLDDGK-----EHFFINISLDTARQRAFIT 248 (353)
T ss_dssp TTTEEEEECTT-----------SEEEEEETTTTEEEEE----------EECCCSSS-----CCCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCeEEEE----------EEcCCCCC-----CcccceEEECCCCCEEEEE
Confidence 99988776542 2588999877553211 00000000 0012346799999988766
Q ss_pred eeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 351 SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 351 ~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
.. +...|+.+|+.+++.......... ....++++++.+++..... ..|.++++.++
T Consensus 249 ~~--~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~~ 304 (353)
T 3vgz_A 249 DS--KAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQA---GKVSVIDAKSY 304 (353)
T ss_dssp ES--SSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTT---TEEEEEETTTT
T ss_pred eC--CCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCC---CeEEEEECCCC
Confidence 53 345788999998887654433222 3367899999877765332 46777776543
No 232
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=6.5e-12 Score=130.91 Aligned_cols=283 Identities=13% Similarity=0.059 Sum_probs=152.8
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCC--CCCeEEEEe-cCCccEEEEecCcccccc
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--ESPIQFELW-SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 92 (715)
..|+++.++....+..+++.. +.......+|||||++|++....++ +.-.+|.+. .+|+.+.+........
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~----~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~-- 100 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA----EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA-- 100 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE----ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS--
T ss_pred CCEEEEEEeCCCCCEEEeecc----cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC--
Confidence 356666676555444443322 2255677899999999988876532 333446666 3466666554322110
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC-
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS- 171 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~- 171 (715)
....+++ ||++|+..... ...|.+|++++
T Consensus 101 -----~p~~~~~--dg~~l~~~~~~-------------------------------------------~~~v~~~~~~~~ 130 (361)
T 3scy_A 101 -----DPCYLTT--NGKNIVTANYS-------------------------------------------GGSITVFPIGQD 130 (361)
T ss_dssp -----CEEEEEE--CSSEEEEEETT-------------------------------------------TTEEEEEEBCTT
T ss_pred -----CcEEEEE--CCCEEEEEECC-------------------------------------------CCEEEEEEeCCC
Confidence 0134555 89887765321 15577787753
Q ss_pred CceEeec---CCCC---------CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 172 GEVQAVK---GIPK---------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 172 g~~~~l~---~~~~---------~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
+....+. ...+ ......++|+|||+. |+++.. ....|++++++
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~--------------~~~~v~v~~~~------- 185 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY----LLADDL--------------GTDQIHKFNIN------- 185 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE----EEEEET--------------TTTEEEEEEEC-------
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE----EEEEeC--------------CCCEEEEEEEc-------
Confidence 3222220 0000 112345899999997 776542 12246666541
Q ss_pred hhhhhccCCCCC----C-c-------eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC
Q 005093 240 ELELKESSSEDL----P-V-------VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 307 (715)
Q Consensus 240 ~~~~~~~~~~~~----~-~-------~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 307 (715)
..++ + . ............++|||||++|++....+ ..|.++++.++....
T Consensus 186 --------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 186 --------PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG----------GTVIAFRYADGMLDE 247 (361)
T ss_dssp --------TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------CEEEEEEEETTEEEE
T ss_pred --------CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC----------CeEEEEEecCCceEE
Confidence 0222 1 1 11222233467799999999887766442 247788876543211
Q ss_pred cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCcEEEecC--CCCCceeEEE
Q 005093 308 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLRITP--AESNFSWSLL 384 (715)
Q Consensus 308 lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~-~~~~~l~~~d~~tg~~~~l~~--~~~~~~~~~~ 384 (715)
+. .+...... + .....++|+|||+.|+++... .+...+|.++..+|+.+.+.. .........|
T Consensus 248 ~~-------~~~~~~~~--~-----~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~ 313 (361)
T 3scy_A 248 IQ-------TVAADTVN--A-----QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFII 313 (361)
T ss_dssp EE-------EEESCSSC--C-----CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEE
T ss_pred eE-------EEecCCCC--C-----CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEE
Confidence 11 00000000 0 012367799999988776655 566678878777787655432 1112334678
Q ss_pred eecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 385 TLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 385 s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+++++.|++..... ..-.+|.++..++
T Consensus 314 spdg~~l~~~~~~~-~~v~v~~~d~~~g 340 (361)
T 3scy_A 314 TPNGKYLLVACRDT-NVIQIFERDQATG 340 (361)
T ss_dssp CTTSCEEEEEETTT-TEEEEEEECTTTC
T ss_pred CCCCCEEEEEECCC-CCEEEEEEECCCC
Confidence 99998887665332 2223444554333
No 233
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.47 E-value=1.1e-11 Score=127.91 Aligned_cols=268 Identities=15% Similarity=0.097 Sum_probs=146.4
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 92 (715)
....|++++++..+. ...+...+ ....+...+|||||++|++....+ +.-.+|.+. .+++...+.......
T Consensus 13 ~~~~v~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~--- 84 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGA-LTLTQVVD---VPGQVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESALPG--- 84 (343)
T ss_dssp GGTEEEEEEECTTSC-EEEEEEEE---CSSCCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEECSS---
T ss_pred CCCeEEEEEECCCCc-EEEeeeEe---cCCCCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeeccccccCC---
Confidence 344667766754321 11121111 124567789999999998876643 333344444 355555444332111
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
....+.|||||++|++.... ...|++||++.+
T Consensus 85 -----~~~~~~~s~dg~~l~~~~~~-------------------------------------------~~~i~~~d~~~~ 116 (343)
T 1ri6_A 85 -----SLTHISTDHQGQFVFVGSYN-------------------------------------------AGNVSVTRLEDG 116 (343)
T ss_dssp -----CCSEEEECTTSSEEEEEETT-------------------------------------------TTEEEEEEEETT
T ss_pred -----CCcEEEEcCCCCEEEEEecC-------------------------------------------CCeEEEEECCCC
Confidence 12789999999998776432 256888888433
Q ss_pred ---ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 173 ---EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 173 ---~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
+.... .........++|+|||+. |+.... ....|+++|+ .
T Consensus 117 ~~~~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~~--------------~~~~v~~~d~-----------------~ 159 (343)
T 1ri6_A 117 LPVGVVDV--VEGLDGCHSANISPDNRT----LWVPAL--------------KQDRICLFTV-----------------S 159 (343)
T ss_dssp EEEEEEEE--ECCCTTBCCCEECTTSSE----EEEEEG--------------GGTEEEEEEE-----------------C
T ss_pred cccccccc--ccCCCCceEEEECCCCCE----EEEecC--------------CCCEEEEEEe-----------------c
Confidence 33332 223334667899999997 655431 1236888886 3
Q ss_pred C-CCcee-----cCC-CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC--CCCCCcccceeeeeecee
Q 005093 250 D-LPVVN-----LTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 250 ~-~~~~~-----lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~~~lt~~~~~~~~~~~ 320 (715)
+ ++... +.. .........|+|||++|++....+ ..+.++++.. +....+ ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~----------~~i~~~~~~~~~g~~~~~-----~~~~~~- 223 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN----------SSVDVWELKDPHGNIECV-----QTLDMM- 223 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT----------TEEEEEESSCTTSCCEEE-----EEEECS-
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC----------CEEEEEEecCCCCcEEEE-----eecccc-
Confidence 3 44332 222 222456688999999887776442 2577778753 221111 000000
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec--CCCCCceeEEEeecCCEEEEEE
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT--PAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~--~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
.. .+.+ ......++|+|||+.++++....+...+|.++..+++.+.+. ..........|+++++.|++..
T Consensus 224 -~~--~~~~--~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 224 -PE--NFSD--TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp -CT--TCCS--CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEEC
T ss_pred -Cc--cccc--cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEec
Confidence 00 0000 001224789999998877654445444554443355544432 2222234467888888777654
No 234
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.47 E-value=7.5e-12 Score=129.63 Aligned_cols=268 Identities=12% Similarity=0.050 Sum_probs=141.0
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccC
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYA 95 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 95 (715)
.|+++.++....+..+++. .........++|||||+ |+++...+ +...++.+. .+++.+.+.......
T Consensus 17 ~i~v~~~d~~tg~~~~~~~---~~~~~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~------ 85 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGL---LAATQNPTYLALSAKDC-LYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPG------ 85 (347)
T ss_dssp EEEEEEEETTTTEEEEEEE---EEECSCCCCEEECTTCE-EEEEEEET-TEEEEEEEEEETTEEEEEEEEEEES------
T ss_pred CEEEEEEcCCCCeEEEeee---eeccCCcceEEEccCCe-EEEEEecC-CCceEEEEEecCCcEEEeeeeecCC------
Confidence 4555556654433333221 11225567789999999 76665432 233455544 556555544321111
Q ss_pred CCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-CCce
Q 005093 96 DGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEV 174 (715)
Q Consensus 96 ~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~g~~ 174 (715)
.....++|||||++|++.... ...+.+|+++ +|..
T Consensus 86 -~~p~~~a~spdg~~l~~~~~~-------------------------------------------~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 86 -TPPAYVAVDEARQLVYSANYH-------------------------------------------KGTAEVMKIAADGAL 121 (347)
T ss_dssp -CCCSEEEEETTTTEEEEEETT-------------------------------------------TTEEEEEEECTTSCE
T ss_pred -CCCEEEEECCCCCEEEEEeCC-------------------------------------------CCEEEEEEeCCCCCe
Confidence 112689999999998876422 1457777774 4444
Q ss_pred EeecC--CCC--------CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhh
Q 005093 175 QAVKG--IPK--------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 244 (715)
Q Consensus 175 ~~l~~--~~~--------~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (715)
+.+.. ..+ ......++|+|||+ ++.+.. ....|+++++.
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-----l~v~~~--------------~~~~v~~~~~~------------ 170 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-----LAVIDL--------------GSDKVYVYNVS------------ 170 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-----EEEEET--------------TTTEEEEEEEC------------
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCc-----EEEEeC--------------CCCEEEEEEEC------------
Confidence 43310 111 11244689999998 444331 22367788861
Q ss_pred ccCCCCCCceecC---CC-CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC--CCCCCcccceeeeeec
Q 005093 245 ESSSEDLPVVNLT---ES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPV 318 (715)
Q Consensus 245 ~~~~~~~~~~~lt---~~-~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~~~lt~~~~~~~~~ 318 (715)
.+++...+. .. ......++|||||++|+++.... ..+.++++.. +....+. .+
T Consensus 171 ----~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~~~g~~~~~~-------~~ 229 (347)
T 3hfq_A 171 ----DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS----------SQIASLKYDTQTGAFTQLG-------IV 229 (347)
T ss_dssp ----TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------TEEEEEEEETTTTEEEEEE-------EE
T ss_pred ----CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC----------CEEEEEEecCCCCceEEee-------ee
Confidence 244443221 11 22355689999999887766543 2355555543 3221110 00
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe---cCCCCCceeEEEeecCCEEEEEE
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
..... .+.+ ......++|+|||+.||++....+...+|.++. +|..+.+ ...........|+++++.|++..
T Consensus 230 ~~~~~--~~~~--~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 230 KTIPA--DYTA--HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp ESSCT--TCCS--CCEEEEEEECTTSCEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred eecCC--CCCC--CCcceeEEECCCCCEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 00000 0000 001335779999998877766555555555543 3443333 22122234467899998887655
Q ss_pred e
Q 005093 396 S 396 (715)
Q Consensus 396 ~ 396 (715)
.
T Consensus 305 ~ 305 (347)
T 3hfq_A 305 Q 305 (347)
T ss_dssp T
T ss_pred c
Confidence 4
No 235
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.47 E-value=9.3e-13 Score=132.63 Aligned_cols=216 Identities=15% Similarity=0.074 Sum_probs=131.9
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcC--------CCCCCCchhhhhcCC-
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQSLP- 533 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~--------rG~~~~g~~~~~~~~- 533 (715)
..+.+.+|+|++ .++.|+||.+||+.. ...+||+|+.+++ +|+.++|. +.....
T Consensus 123 ~sf~~~i~lP~g---~~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~ 185 (433)
T 4g4g_A 123 ISFSASIRKPSG---AGPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGR 185 (433)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEEECCCC---CCCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccccCC
Confidence 457899999973 578999999997421 1367999999987 34445665 433222
Q ss_pred -CCCCccc--hhhHHHHHHHHHH----cCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcchhhhhcc----
Q 005093 534 -GKVGSQD--VNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG---- 602 (715)
Q Consensus 534 -~~~~~~~--~~d~~~~i~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~---- 602 (715)
..++... ..++.+++++|.. +..+|++||+++|||+||..++++++.. ++|+++|..++..+......
T Consensus 186 ~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~~~~R~~~~ 264 (433)
T 4g4g_A 186 DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGAACWRISDQ 264 (433)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTTSCHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCchhhhhhchh
Confidence 2344332 3588999999999 7889999999999999999999999975 58999999887554221110
Q ss_pred ---C-CCC---------CCceeeeccCCCCCCCCCCCC---ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchH
Q 005093 603 ---T-TDI---------PDWCYVESYGSKGKDSFTESP---SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN 666 (715)
Q Consensus 603 ---~-~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~ 666 (715)
. ... ..|. ... ...+.... ..+..+...... ..|+|++.| .|..+++..
T Consensus 265 ~~~~Ge~v~~~~~~~ge~~Wf-~~~-----f~~y~~~~~~LPfD~heL~ALiA--------PRPlLv~~g-~D~w~~p~g 329 (433)
T 4g4g_A 265 QKAAGANIQTAAQIITENPWF-SRN-----FDPHVNSITSVPQDHHLLAALIV--------PRGLAVFEN-NIDWLGPVS 329 (433)
T ss_dssp HHHTTCCCCCHHHHTTTCCCS-CTT-----TGGGTTCGGGSSCCGGGHHHHHT--------TSEEEEEEC-CCTTTCHHH
T ss_pred hcccCcchhhhhcccCCcccc-chh-----hHhhccccccCCcCHHHHHHhhC--------CceEEEecC-CCCcCCcHH
Confidence 0 000 0110 000 00010000 001111111111 258999999 898888776
Q ss_pred HHHHHHHHH----HcCC--cEEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 667 GLQYARALR----EKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 667 ~~~~~~~l~----~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
....+.+++ ..|. .+.+....+.+|... +.. ....+.+||++||+
T Consensus 330 ~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~f-p~~---~r~~~~~F~~k~Lk 380 (433)
T 4g4g_A 330 TTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQF-PSS---QNQDLNSYINYFLL 380 (433)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCC-CGG---GHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeeCCCCcccC-CHH---HHHHHHHHHHHHhC
Confidence 554444432 3354 466655444445322 222 34778899999985
No 236
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.46 E-value=1.1e-12 Score=127.42 Aligned_cols=208 Identities=13% Similarity=0.075 Sum_probs=132.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCc--EEEEEcCCCCCCCchhhhh-cC-------------CCC-CCc--cch
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLGFGEEALQ-SL-------------PGK-VGS--QDV 541 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~--~vi~~d~rG~~~~g~~~~~-~~-------------~~~-~~~--~~~ 541 (715)
.+.||++||.... ...|..++..|+++|+ .|+.+|.++ +|..... .. ..+ ... ...
T Consensus 6 ~~pvvliHG~~~~--~~~~~~l~~~L~~~g~~~~vi~~dv~~---~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~ 80 (249)
T 3fle_A 6 TTATLFLHGYGGS--ERSETFMVKQALNKNVTNEVITARVSS---EGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENA 80 (249)
T ss_dssp CEEEEEECCTTCC--GGGTHHHHHHHHTTTSCSCEEEEEECS---SCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHH
T ss_pred CCcEEEECCCCCC--hhHHHHHHHHHHHcCCCceEEEEEECC---CCCEEEccccccccCCCeEEEEcCCCCCccHHHHH
Confidence 4568999995443 6688899999999996 588888775 2221000 00 000 001 125
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC-----ceeEEEecCCcchhhhhccCCCCCCceeeeccC
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 616 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (715)
+++.++++.+.++. ..+++.++||||||.+++.++.++|. +++.+|++++..+....... ..... .+.
T Consensus 81 ~~l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~~---~~~ 153 (249)
T 3fle_A 81 YWIKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE--NVNEI---IVD 153 (249)
T ss_dssp HHHHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS--CTTTS---CBC
T ss_pred HHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC--Ccchh---hhc
Confidence 56777788887764 34789999999999999999998863 78999988876653321110 00000 000
Q ss_pred CCCCCCCCCCCC--hhhHHHHHhcCchhhccCCCCcEEEEeeC------CCCcCCchHHHHHHHHHHHcCCcEEEEEeCC
Q 005093 617 SKGKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN 688 (715)
Q Consensus 617 ~~~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~ 688 (715)
. .+.|. ......+... ...+.+..+|+|.|+|+ .|..||...+..+...++......+.+.+.|
T Consensus 154 ~------~g~p~~~~~~~~~l~~~--~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g 225 (249)
T 3fle_A 154 K------QGKPSRMNAAYRQLLSL--YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKG 225 (249)
T ss_dssp T------TCCBSSCCHHHHHTGGG--HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEES
T ss_pred c------cCCCcccCHHHHHHHHH--HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeC
Confidence 0 01111 1122222221 23345467899999998 6999999988887777776666667677766
Q ss_pred --CCccCCCCCchHHHHHHHHHHH
Q 005093 689 --DVHGIERPQSDFESFLNIGLWF 710 (715)
Q Consensus 689 --~~H~~~~~~~~~~~~~~i~~wl 710 (715)
+.|..... + .++.+.|.+||
T Consensus 226 ~~a~Hs~l~~-n-~~V~~~I~~FL 247 (249)
T 3fle_A 226 AKAQHSQLHE-N-KDVANEIIQFL 247 (249)
T ss_dssp GGGSTGGGGG-C-HHHHHHHHHHH
T ss_pred CCCchhcccc-C-HHHHHHHHHHh
Confidence 88976644 3 36888888887
No 237
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.45 E-value=1.7e-11 Score=125.98 Aligned_cols=240 Identities=9% Similarity=-0.006 Sum_probs=138.6
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccceE-EeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGASA-VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
..|+.+|+.++.....+++.. ..... .+|||||++|+ +...+++...++.++ .+++..+.+......
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~---- 130 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDA---- 130 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTE----
T ss_pred CeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCc----
Confidence 467777665543212222211 23445 89999999998 544332223566665 556655554443333
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCce-EEEEEccCC
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS-LFVININSG 172 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-l~~~~~~~g 172 (715)
..+.|||||++|++..... .. |++|+++..
T Consensus 131 ------~~~~~spdg~~l~~~~~~~-------------------------------------------~~~i~~~~~~~~ 161 (331)
T 3u4y_A 131 ------VGIAISPNGNGLILIDRSS-------------------------------------------ANTVRRFKIDAD 161 (331)
T ss_dssp ------EEEEECTTSSCEEEEEETT-------------------------------------------TTEEEEEEECTT
T ss_pred ------cceEECCCCCEEEEEecCC-------------------------------------------CceEEEEEECCC
Confidence 6899999999987754321 33 666666432
Q ss_pred -ce----EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccC
Q 005093 173 -EV----QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESS 247 (715)
Q Consensus 173 -~~----~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 247 (715)
.. ... .........+.|+|||+. ++++.. ....|+++|+
T Consensus 162 g~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~v~~~--------------~~~~v~v~d~---------------- 205 (331)
T 3u4y_A 162 GVLFDTGQEF--ISGGTRPFNITFTPDGNF----AFVANL--------------IGNSIGILET---------------- 205 (331)
T ss_dssp CCEEEEEEEE--ECSSSSEEEEEECTTSSE----EEEEET--------------TTTEEEEEEC----------------
T ss_pred CcEeecCCcc--ccCCCCccceEECCCCCE----EEEEeC--------------CCCeEEEEEC----------------
Confidence 22 111 122334678899999997 766542 2247888997
Q ss_pred CCCCCc---eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCC
Q 005093 248 SEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG 324 (715)
Q Consensus 248 ~~~~~~---~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~ 324 (715)
.+++. ............++|||||++|++..... ..|+++|+.+++.+.+..-... + . .+
T Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~i~~~d~~~~~~~~~~~~~~~---~-~--~~ 268 (331)
T 3u4y_A 206 -QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTEST----------VDVFNFNQLSGTLSFVKSFGHG---L-L--ID 268 (331)
T ss_dssp -SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSE----------EEEEEEETTTTEEEEEEEEECC---C-C--CC
T ss_pred -CCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCC----------CEEEEEECCCCceeeecccccc---c-c--cC
Confidence 55554 22222335567899999999887665432 3488999887654222110000 0 0 00
Q ss_pred CCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 325 DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 325 ~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
. ........++|+|||+.|+++....+ .+..+|+.+.....+..
T Consensus 269 ~----~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~ 312 (331)
T 3u4y_A 269 P----RPLFGANQMALNKTETKLFISANISR--ELKVFTISGKVVGYVAG 312 (331)
T ss_dssp C----GGGTTCCCEEECTTSSEEEEEETTTT--EEEEEETTSCEEEECTT
T ss_pred C----CCcccccceEECCCCCEEEEecCCCC--cEEEEEecCCcccceec
Confidence 0 01112245689999998877765443 57777887776666543
No 238
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.43 E-value=5.4e-12 Score=130.72 Aligned_cols=251 Identities=12% Similarity=0.132 Sum_probs=140.1
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccc-
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV- 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 93 (715)
...|++++++++.. .+++. +..........+|||||++|++....+ +.-.+|.+..+|....+........+..
T Consensus 62 ~~~v~~~~~~~g~~--~~~~~--~~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 62 EGGIAAWQIDGQTA--HKLNT--VVAPGTPPAYVAVDEARQLVYSANYHK-GTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEEETTEE--EEEEE--EEEESCCCSEEEEETTTTEEEEEETTT-TEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred CceEEEEEecCCcE--EEeee--eecCCCCCEEEEECCCCCEEEEEeCCC-CEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 45777877754432 23322 111224567889999999998776433 4344555544555544443321100000
Q ss_pred -cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-C
Q 005093 94 -YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-S 171 (715)
Q Consensus 94 -~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~ 171 (715)
........+.|||||+ |+. +.. ....|++|+++ +
T Consensus 137 ~~~~~~~~~~~~spdg~-l~v-~~~------------------------------------------~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNR-LAV-IDL------------------------------------------GSDKVYVYNVSDA 172 (347)
T ss_dssp TCSSCCEEEEEECTTSC-EEE-EET------------------------------------------TTTEEEEEEECTT
T ss_pred cccCCCceEEEECCCCc-EEE-EeC------------------------------------------CCCEEEEEEECCC
Confidence 0001235689999999 544 322 12568999988 6
Q ss_pred CceEeec--CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 172 GEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 172 g~~~~l~--~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
|+...+. ..........++|+|||+. ++++.. ....|.+++++ ..
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~--------------~~~~v~v~~~~---------------~~ 219 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQY----AFLAGE--------------LSSQIASLKYD---------------TQ 219 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSE----EEEEET--------------TTTEEEEEEEE---------------TT
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCE----EEEEeC--------------CCCEEEEEEec---------------CC
Confidence 6655431 0122224557899999997 666542 11245555541 02
Q ss_pred CCCceec---CCCC------ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 250 DLPVVNL---TESI------SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 250 ~~~~~~l---t~~~------~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
+++.+.+ .... .....++|||||++|+.....+ ..|.++++...+... .+....
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~----------~~v~v~~~~~~g~~~-------~~~~~~ 282 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY----------NTLAVFAVTADGHLT-------LIQQIS 282 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT----------TEEEEEEECGGGCEE-------EEEEEE
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC----------CEEEEEEECCCCcEE-------EeEEEe
Confidence 3433221 1111 2366799999999887665432 347777775322110 011010
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
.. . ..+..++|+|||+.|++.....+...+|.+|.++|+.+.+.
T Consensus 283 ~~--~-------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 283 TE--G-------DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp CS--S-------SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cC--C-------CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 00 0 12456789999998877766667788999999999988765
No 239
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.43 E-value=5.8e-11 Score=121.90 Aligned_cols=253 Identities=11% Similarity=0.058 Sum_probs=155.2
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 92 (715)
...+.++++....... .+...........+...+|||||+.|+.....+ .+ .+| .+++......... ...
T Consensus 71 dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i-~~~d~~~~~~~~~~~~~~-~~~- 142 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKS-PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS----TL-SIWDLAAPTPRIKAELTS-SAP- 142 (337)
T ss_dssp BSEEEEEETTSTTCCS-CSEEEECSCTTSBEEEEEECTTSSEEEEEESSS----EE-EEEECCCC--EEEEEEEC-SSS-
T ss_pred CCeEEEEECCCCCcee-eeecccccCCCCcEEEEEEcCCCCEEEEEcCCC----cE-EEEECCCCCcceeeeccc-CCC-
Confidence 3456666676554211 111111112235688999999999998875543 33 344 3333222222211 111
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
.+..+.|+|||+.|+.... ...|++||+.++
T Consensus 143 -----~i~~~~~~~~~~~l~~~~~--------------------------------------------dg~v~~~d~~~~ 173 (337)
T 1gxr_A 143 -----ACYALAISPDSKVCFSCCS--------------------------------------------DGNIAVWDLHNQ 173 (337)
T ss_dssp -----CEEEEEECTTSSEEEEEET--------------------------------------------TSCEEEEETTTT
T ss_pred -----ceEEEEECCCCCEEEEEeC--------------------------------------------CCcEEEEeCCCC
Confidence 2268999999998887532 256999999888
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
+..... ......+..+.|+|||+. |+... .+..|+.+|+ .+++
T Consensus 174 ~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~~~d~-----------------~~~~ 216 (337)
T 1gxr_A 174 TLVRQF-QGHTDGASCIDISNDGTK----LWTGG---------------LDNTVRSWDL-----------------REGR 216 (337)
T ss_dssp EEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET-----------------TTTE
T ss_pred ceeeee-ecccCceEEEEECCCCCE----EEEEe---------------cCCcEEEEEC-----------------CCCc
Confidence 765431 233446778999999987 66554 2346888897 5555
Q ss_pred ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 253 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 253 ~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
..........+....|+|||+.|+..+.+. .|+++|+.+++...+.. +.
T Consensus 217 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-----------~i~~~~~~~~~~~~~~~--------------------~~ 265 (337)
T 1gxr_A 217 QLQQHDFTSQIFSLGYCPTGEWLAVGMESS-----------NVEVLHVNKPDKYQLHL--------------------HE 265 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTS-----------CEEEEETTSSCEEEECC--------------------CS
T ss_pred eEeeecCCCceEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCCeEEEcC--------------------Cc
Confidence 444444556678899999999998776542 48888887755322211 11
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
..+..+.|+||++.++ +...++ .|..+|+.+++..........+....|+++++.|+...
T Consensus 266 ~~v~~~~~~~~~~~l~-~~~~dg--~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 266 SCVLSLKFAYCGKWFV-STGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp SCEEEEEECTTSSEEE-EEETTS--EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE
T ss_pred cceeEEEECCCCCEEE-EecCCC--cEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEec
Confidence 1345678999998654 444343 66777888888775554444445567888887665544
No 240
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.42 E-value=4e-12 Score=129.66 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=123.8
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGL 556 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~ 556 (715)
.+..|.||++||.........|..++..| ..||.|+++|+|| +|.+.. ....++++.+. ++.+.+.
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G---~G~~~~-------~~~~~~~~~~~~~~~l~~~-- 144 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPG---FHGGQA-------LPATLTVLVRSLADVVQAE-- 144 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTT---SSTTCC-------EESSHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh--
Confidence 34568899999942222356788888888 7899999999999 553211 11123333333 2333332
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhC---CCceeEEEecCCcchhhhhccCCCCCCce--eeeccCCCCCCCCCCCC----
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESP---- 627 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---- 627 (715)
.+..++.|+||||||.+++.+|.++ |++++++|++++....... .....+. ........ ...+....
T Consensus 145 ~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 220 (319)
T 3lcr_A 145 VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG---GRPEELFRSALNERFVE-YLRLTGGGNLSQ 220 (319)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC---CHHHHHHHHHHHHHHHH-HHHHHCCCCHHH
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc---hhhHHHHHHHHHHHHhh-hhcccCCCchhH
Confidence 1236899999999999999999887 8889999988765321100 0000000 00000000 00000000
Q ss_pred ChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCchHHHHHHHH
Q 005093 628 SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 707 (715)
Q Consensus 628 ~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 707 (715)
.......+...........+++|+|+++|++ ..+++.....+.+.+.. ..+++.+++.+|.+..++....+.+.|.
T Consensus 221 ~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va~~i~ 296 (319)
T 3lcr_A 221 RITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTAHIVG 296 (319)
T ss_dssp HHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHHHHHH
Confidence 0000111111111112257889999999998 55665666666665542 4678888875555554467778999999
Q ss_pred HHHHHh
Q 005093 708 LWFKKY 713 (715)
Q Consensus 708 ~wl~~~ 713 (715)
+||++.
T Consensus 297 ~fL~~~ 302 (319)
T 3lcr_A 297 DWLREA 302 (319)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999864
No 241
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.42 E-value=4.4e-13 Score=133.98 Aligned_cols=233 Identities=11% Similarity=0.077 Sum_probs=134.4
Q ss_pred CCceEEEEEEecCCCC-----CCCCCcEEEEEcCCCCCCCCccchH---HHHHHHhCCcEEEEEcCC--CCCCCch---h
Q 005093 461 AQKPFEAIFVSSSHKK-----DCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYR--GSLGFGE---E 527 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~-----~~~~~P~vv~iHGg~~~~~~~~~~~---~~~~la~~G~~vi~~d~r--G~~~~g~---~ 527 (715)
-+.++...||+|+++. ..+++|+|.++||.+.. ...|.. ..+.+++.+.++++++-. +..--+. .
T Consensus 24 l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~--~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT--PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC--HHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred cCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC--hHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 5678888999998763 35689999999996554 333433 334567789999999842 1100000 0
Q ss_pred h----hhcCCCCCC------ccchhh-HH-HHHHHHHHcCC-------CCCceEEEEEeChhHHHHHHHHhhC--CCcee
Q 005093 528 A----LQSLPGKVG------SQDVND-VL-TAIDHVIDMGL-------ANPSKVTVVGGSHGGFLTTHLIGQA--PDKFV 586 (715)
Q Consensus 528 ~----~~~~~~~~~------~~~~~d-~~-~~i~~l~~~~~-------~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~ 586 (715)
+ ......+.. ....++ +. +.+.++.++.. .+.++.+|.|+||||+.|+.++.++ |.++.
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~ 181 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYK 181 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCS
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceE
Confidence 0 000000000 011111 11 23333333321 2456899999999999999999985 67889
Q ss_pred EEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhcc---CC-CCcEEEEeeCCCCcC
Q 005093 587 AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHIS---KV-KTPTIFLLGAQDLRV 662 (715)
Q Consensus 587 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~---~i-~~P~Lii~G~~D~~v 662 (715)
++.+.+|.++..... |.. ..+ ..+.+ .....+...++...+. +. ..+++|-+|+.|...
T Consensus 182 ~~~s~s~~~~p~~~~-------~~~-~~~-----~~~~g----~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~ 244 (299)
T 4fol_A 182 SCSAFAPIVNPSNVP-------WGQ-KAF-----KGYLG----EEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFL 244 (299)
T ss_dssp EEEEESCCCCGGGSH-------HHH-HHH-----HHHTC---------CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTH
T ss_pred EEEecccccCccccc-------ccc-ccc-----ccccc----cchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcch
Confidence 999999887643211 100 000 00000 1112223334433322 22 257999999999876
Q ss_pred Cch-HHHHHHHHHHHcCCc--EEEEEeCCCCccCCCCCchHHHHHHHHHHHHHhcC
Q 005093 663 PVS-NGLQYARALREKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 715 (715)
Q Consensus 663 ~~~-~~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 715 (715)
... ....+.++++++|.+ +++...+|.+|.+... ..++++.++|..++|+
T Consensus 245 ~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f~---~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 245 EEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFV---STFVPEHAEFHARNLG 297 (299)
T ss_dssp HHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHHH---HHHHHHHHHHHHHHTT
T ss_pred hhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHHH---HHHHHHHHHHHHHhcC
Confidence 321 125688888888876 7888899989986432 2456778889888875
No 242
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.41 E-value=1.6e-11 Score=131.41 Aligned_cols=248 Identities=6% Similarity=-0.042 Sum_probs=157.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
+.+...+|+|+|+.++-....+ .+...+ .+++.......... ....+.|+|||++|++....
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~----~v~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~---- 232 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQAN----AVHVFDLKTLAYKATVDLTGK---------WSKILLYDPIRDLVYCSNWI---- 232 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGT----EEEEEETTTCCEEEEEECSSS---------SEEEEEEETTTTEEEEEETT----
T ss_pred CceeEEEEcCCCEEEEEECCCC----EEEEEECCCceEEEEEcCCCC---------CeeEEEEcCCCCEEEEEecC----
Confidence 4577889999998665443322 344333 44444443332111 12689999999988775322
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
...|++||+++++.... ......+..+.|+|||+.
T Consensus 233 ---------------------------------------~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~---- 267 (433)
T 3bws_A 233 ---------------------------------------SEDISVIDRKTKLEIRK--TDKIGLPRGLLLSKDGKE---- 267 (433)
T ss_dssp ---------------------------------------TTEEEEEETTTTEEEEE--CCCCSEEEEEEECTTSSE----
T ss_pred ---------------------------------------CCcEEEEECCCCcEEEE--ecCCCCceEEEEcCCCCE----
Confidence 25799999998887655 344445778999999997
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
|+......+.. ...+..|+++|+ .+++.............+.|+|||+.|+++...
T Consensus 268 l~~~~~~~~~~-------~~~dg~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 268 LYIAQFSASNQ-------ESGGGRLGIYSM-----------------DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp EEEEEEESCTT-------CSCCEEEEEEET-----------------TTTEEEEEEEEEECEEEEEECSSTTEEEEEETT
T ss_pred EEEEECCCCcc-------ccCCCeEEEEEC-----------------CCCcEEeeccCCCCcceEEECCCCCEEEEEecC
Confidence 77765322110 012347999997 555554444334456789999999988877654
Q ss_pred CCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe-----
Q 005093 282 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS----- 356 (715)
Q Consensus 282 ~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~----- 356 (715)
+ ..|+++|+.+++.... +.. ...+..++|+|||+.+++.....+.
T Consensus 324 ~----------~~v~v~d~~~~~~~~~----------~~~----------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 324 C----------SKIEVYDLKEKKVQKS----------IPV----------FDKPNTIALSPDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp T----------TEEEEEETTTTEEEEE----------EEC----------SSSEEEEEECTTSSEEEEEECCCCCTTTCT
T ss_pred C----------CEEEEEECCCCcEEEE----------ecC----------CCCCCeEEEcCCCCEEEEEecCCCcccccc
Confidence 3 3588999876543111 000 0123467899999978776654332
Q ss_pred -------eEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 357 -------QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 357 -------~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
..|+.+|+.+++...............++++++.|++..... ..|.+.++
T Consensus 374 ~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~ 430 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRR 430 (433)
T ss_dssp TSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEE
T ss_pred ccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEe
Confidence 389999999998777665544445567888888876654322 24555554
No 243
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.40 E-value=9.5e-13 Score=129.59 Aligned_cols=210 Identities=15% Similarity=0.087 Sum_probs=124.5
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCCcE---EEEEcCCC--------CCC--Cchhhhh-cCCCC-CC-ccchhhHH
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS---LLIVNYRG--------SLG--FGEEALQ-SLPGK-VG-SQDVNDVL 545 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~---vi~~d~rG--------~~~--~g~~~~~-~~~~~-~~-~~~~~d~~ 545 (715)
+.||++||.+.. ...|..++..|+++++. ++.++.++ ... .+..... ..... .. ....+++.
T Consensus 4 ~pvvllHG~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGN--ASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCC--TTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCC--cchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 458899996554 45688889999888763 33332221 110 0000000 00001 11 11245566
Q ss_pred HHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC-----ceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCC
Q 005093 546 TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 620 (715)
Q Consensus 546 ~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (715)
++++.+.+.. ..+++.++||||||.+++.++.++|+ +++++|++++..+......... .+..
T Consensus 82 ~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~--------~~~~--- 148 (254)
T 3ds8_A 82 IAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGM--------DLSF--- 148 (254)
T ss_dssp HHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCS--------CTTC---
T ss_pred HHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccc--------cccc---
Confidence 6667777763 33789999999999999999999988 8999999998765432211000 0000
Q ss_pred CCCCCCCC-hhhHHHHHhcCchhhccCCCCcEEEEeeC------CCCcCCchHHHHHHHHHHHcCCcEEEEEeCC--CCc
Q 005093 621 DSFTESPS-VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--DVH 691 (715)
Q Consensus 621 ~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H 691 (715)
...+. ......+... ...+.+ ++|+|.|+|. .|.+||+..+..+...+.......+.+.+.+ ++|
T Consensus 149 ---~~~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~H 222 (254)
T 3ds8_A 149 ---KKLPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVH 222 (254)
T ss_dssp ---SSCSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCG
T ss_pred ---ccCCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCch
Confidence 00111 1111111111 112222 6899999999 9999999988877666654434455566666 668
Q ss_pred cCCCCCchHHHHHHHHHHHHHhc
Q 005093 692 GIERPQSDFESFLNIGLWFKKYC 714 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~~l 714 (715)
...... . ++.+.+..|++++.
T Consensus 223 s~l~~~-~-~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 223 QTLHET-P-KSIEKTYWFLEKFK 243 (254)
T ss_dssp GGGGGS-H-HHHHHHHHHHHTCC
T ss_pred hcccCC-H-HHHHHHHHHHHHhc
Confidence 765443 3 58889999998764
No 244
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.38 E-value=4.6e-12 Score=123.00 Aligned_cols=199 Identities=11% Similarity=0.097 Sum_probs=123.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHhCC---cEEEEEcCCCCCC--Cchhhh----hc-----CCCC-CC----ccchh
Q 005093 482 PLIVVLHGGPHSVSLSSYSKSLAFLSSVG---YSLLIVNYRGSLG--FGEEAL----QS-----LPGK-VG----SQDVN 542 (715)
Q Consensus 482 P~vv~iHGg~~~~~~~~~~~~~~~la~~G---~~vi~~d~rG~~~--~g~~~~----~~-----~~~~-~~----~~~~~ 542 (715)
+.||++||.+.+ ...|..++..|+++| +.|+.+|+++.+. +...+. +. +..+ .+ ....+
T Consensus 5 ~pvv~iHG~~~~--~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 5 APVIMVPGSSAS--QNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCEEEECCCGGG--HHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCEEEECCCCCC--HHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 458889995443 567888999998877 6777776655221 000000 00 0000 00 11246
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC-----CCceeEEEecCCcchhhhhccCCCCCCceeeeccCC
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 617 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (715)
++.++++.+.++. ..+++.++||||||.++..++.++ +++++.+|++++..+..... .
T Consensus 83 ~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~---------------~ 145 (250)
T 3lp5_A 83 WLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS---------------T 145 (250)
T ss_dssp HHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC---------------S
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc---------------c
Confidence 7777888887764 457899999999999999988876 67899999888765432110 0
Q ss_pred CCCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeC----CCCcCCchHHHHHHHHHHHcCCcEEEEEeC--CCCc
Q 005093 618 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGA----QDLRVPVSNGLQYARALREKGVETKVIVFP--NDVH 691 (715)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~----~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~--~~~H 691 (715)
. ........+... ...+.+ .+|+|+|+|+ .|..||...+..+...+.......+.+.+. +++|
T Consensus 146 -----~---~~~~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H 214 (250)
T 3lp5_A 146 -----T---AKTSMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAH 214 (250)
T ss_dssp -----S---CCCHHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSS
T ss_pred -----c---ccCHHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCch
Confidence 0 001112222221 122222 6899999999 899999988877766665433444444554 4669
Q ss_pred cCCCCCchHHHHHHHHHHHHH
Q 005093 692 GIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 692 ~~~~~~~~~~~~~~i~~wl~~ 712 (715)
..... +. ++.+.|.+||.+
T Consensus 215 ~~l~e-~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 215 SDLPQ-NK-QIVSLIRQYLLA 233 (250)
T ss_dssp CCHHH-HH-HHHHHHHHHTSC
T ss_pred hcchh-CH-HHHHHHHHHHhc
Confidence 76533 33 688888888754
No 245
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.38 E-value=4.7e-11 Score=125.75 Aligned_cols=221 Identities=14% Similarity=0.105 Sum_probs=146.0
Q ss_pred eEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCc
Q 005093 69 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 147 (715)
Q Consensus 69 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (715)
.+...+ .+++....+...... ..+.|||||++|++....
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~~~~------------------------------ 52 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSNP----------MGAVISPDGTKVYVANAH------------------------------ 52 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEEGG------------------------------
T ss_pred EEEEEECCCCeEEEEeecCCCc----------ceEEECCCCCEEEEECCC------------------------------
Confidence 344333 455555554433333 689999999998776422
Q ss_pred ccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEE
Q 005093 148 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 227 (715)
Q Consensus 148 ~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~ 227 (715)
...|++||+++++.... ......+..++|+|||+. |++... ....|+
T Consensus 53 -------------d~~i~v~d~~~~~~~~~--~~~~~~v~~~~~spdg~~----l~~~~~--------------~~~~v~ 99 (391)
T 1l0q_A 53 -------------SNDVSIIDTATNNVIAT--VPAGSSPQGVAVSPDGKQ----VYVTNM--------------ASSTLS 99 (391)
T ss_dssp -------------GTEEEEEETTTTEEEEE--EECSSSEEEEEECTTSSE----EEEEET--------------TTTEEE
T ss_pred -------------CCeEEEEECCCCeEEEE--EECCCCccceEECCCCCE----EEEEEC--------------CCCEEE
Confidence 26799999999887655 233336778999999998 777652 224799
Q ss_pred EEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC
Q 005093 228 AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 307 (715)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 307 (715)
++|+ .+++.............++|+|||+.|+++...+ ..|+++|+.+++...
T Consensus 100 v~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----------~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 100 VIDT-----------------TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD----------KTVSVINTVTKAVIN 152 (391)
T ss_dssp EEET-----------------TTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT----------TEEEEEETTTTEEEE
T ss_pred EEEC-----------------CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCC----------CEEEEEECCCCcEEE
Confidence 9997 6666555444445678899999999997776543 369999987754321
Q ss_pred cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeec
Q 005093 308 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 387 (715)
Q Consensus 308 lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~ 387 (715)
.. ... ..+..+.|+|||+.++++.... ..|+.+|+.+++...............++++
T Consensus 153 ~~----------~~~----------~~~~~~~~~~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 210 (391)
T 1l0q_A 153 TV----------SVG----------RSPKGIAVTPDGTKVYVANFDS--MSISVIDTVTNSVIDTVKVEAAPSGIAVNPE 210 (391)
T ss_dssp EE----------ECC----------SSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECSSEEEEEEECTT
T ss_pred EE----------ecC----------CCcceEEECCCCCEEEEEeCCC--CEEEEEECCCCeEEEEEecCCCccceEECCC
Confidence 11 000 0234567999999887765443 4688889999887766654443344578888
Q ss_pred CCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 388 GDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 388 ~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
++.+++..... ....|++.++.++
T Consensus 211 g~~l~~~~~~~-~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 211 GTKAYVTNVDK-YFNTVSMIDTGTN 234 (391)
T ss_dssp SSEEEEEEECS-SCCEEEEEETTTT
T ss_pred CCEEEEEecCc-CCCcEEEEECCCC
Confidence 88887766422 3356777776543
No 246
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.38 E-value=1.7e-12 Score=131.41 Aligned_cols=211 Identities=11% Similarity=0.062 Sum_probs=124.5
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHH-HHHHcC
Q 005093 477 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMG 555 (715)
Q Consensus 477 ~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~-~l~~~~ 555 (715)
..+..|.||++||.+.......|......|. .+|.|+++|++| +|.+.. ....++++.+.+. .+.+.
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~-------~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPG---YEEGEP-------LPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTT---SSTTCC-------BCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh-
Confidence 4456789999999765432256777777774 469999999999 554321 1123555555443 44444
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcchhhh-hccCCCCCCceeeeccCCCCCCCCCCCCC--h
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLAL-MVGTTDIPDWCYVESYGSKGKDSFTESPS--V 629 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 629 (715)
.+.+++.|+|||+||.+++.++.++| ++++++|++++...... .... .........+.... ..... .
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~ 203 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNA--WLEELTATLFDRET----VRMDDTRL 203 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHH--HHHHHHGGGCCCCS----SCCCHHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHH--HHHHHHHHHHhCcC----CccchHHH
Confidence 34578999999999999999999987 48999999988643211 0000 00000000000000 00000 0
Q ss_pred hhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHc-CCcEEEEEeCCCCccCCCCCchHHHHHHHHH
Q 005093 630 EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHGIERPQSDFESFLNIGL 708 (715)
Q Consensus 630 ~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 708 (715)
.....+..........++++|+|+++|+ |..+++.. .. +.+. ...++++++++ +|.....+....+.+.|.+
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~ 276 (300)
T 1kez_A 204 TALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDA 276 (300)
T ss_dssp HHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHH
Confidence 0111111111111246788999999995 66666544 11 2222 22478999999 9987643556688899999
Q ss_pred HHHHh
Q 005093 709 WFKKY 713 (715)
Q Consensus 709 wl~~~ 713 (715)
||++.
T Consensus 277 fl~~~ 281 (300)
T 1kez_A 277 WLGGG 281 (300)
T ss_dssp HHTCC
T ss_pred HHHhc
Confidence 99764
No 247
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.37 E-value=1.7e-12 Score=136.25 Aligned_cols=120 Identities=14% Similarity=0.100 Sum_probs=86.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHh------CCcEEEEEcCCCCCCCchhhhhcCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQSLPG 534 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~------~G~~vi~~d~rG~~~~g~~~~~~~~~ 534 (715)
+|..|+.....+. ....|.||++||.+.+ ...|...+..|++ .||.|+++|++| ||.+... .
T Consensus 93 ~g~~i~~~~~~~~----~~~~~pllllHG~~~s--~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG---~G~S~~~---~ 160 (408)
T 3g02_A 93 EGLTIHFAALFSE----REDAVPIALLHGWPGS--FVEFYPILQLFREEYTPETLPFHLVVPSLPG---YTFSSGP---P 160 (408)
T ss_dssp TTEEEEEEEECCS----CTTCEEEEEECCSSCC--GGGGHHHHHHHHHHCCTTTCCEEEEEECCTT---STTSCCS---C
T ss_pred CCEEEEEEEecCC----CCCCCeEEEECCCCCc--HHHHHHHHHHHhcccccccCceEEEEECCCC---CCCCCCC---C
Confidence 7888987766543 2345779999997765 5578888888877 699999999999 5554321 1
Q ss_pred CCCccchhhHHHHHHHHHHcCCCCCc-eEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 535 KVGSQDVNDVLTAIDHVIDMGLANPS-KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 535 ~~~~~~~~d~~~~i~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
......++++.+.+..+.+.- ..+ +++++|||+||.+++.+|.++|+++...+.+++.
T Consensus 161 ~~~~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 LDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp SSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 112234677777776666652 344 8999999999999999999998766666555443
No 248
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.36 E-value=1.6e-11 Score=126.15 Aligned_cols=276 Identities=10% Similarity=0.023 Sum_probs=162.6
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCC--ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQS--QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.+...+|||||+.+++....+ .+ ..+ ... +.......... +..+.|+|||+.|+... +..
T Consensus 10 ~~v~~~~~s~dg~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~~~~-dg~ 73 (337)
T 1gxr_A 10 KPAYSFHVTADGQMQPVPFPPD----AL-IGPGIPRHARQINTLNHGEV----------VCAVTISNPTRHVYTGG-KGC 73 (337)
T ss_dssp EECCEEEECSSSCEEECCCCTT----SS-SSTTCCSEEEEEEEECCSSC----------CCEEEECSSSSEEEEEC-BSE
T ss_pred CceeEEEECCCCCEEEeecCCC----cE-eccccCCccccceeccCCCc----------eEEEEEecCCcEEEEcC-CCe
Confidence 4578899999999998765433 11 222 111 11222222222 37999999999998876 321
Q ss_pred CCCCCccCCCCCCCCCCc-----CCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeec-CCCCCCccceEEEe
Q 005093 120 PSKPTFSLGSTKGGSSDK-----DCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWA 192 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~s 192 (715)
...|............ ........+.|.++ +..+ .......|.+||+++++..... -......+..+.|+
T Consensus 74 --i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 74 --VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp --EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred --EEEEECCCCCceeeeecccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence 2233322221111111 12222334556666 3333 3334578999999988732221 02233456789999
Q ss_pred cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCC
Q 005093 193 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 271 (715)
Q Consensus 193 pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spd 271 (715)
|+++. |+... .+..|.++|+ .+++ ...+......+....|+||
T Consensus 151 ~~~~~----l~~~~---------------~dg~v~~~d~-----------------~~~~~~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 151 PDSKV----CFSCC---------------SDGNIAVWDL-----------------HNQTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp TTSSE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCCCE----EEEEe---------------CCCcEEEEeC-----------------CCCceeeeeecccCceEEEEECCC
Confidence 99987 66554 2236888887 4443 4455556667889999999
Q ss_pred CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 272 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 272 g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
|+.|+..+.+. .|+++|+.+++...... ....+..+.|+|+++.++...
T Consensus 195 ~~~l~~~~~dg-----------~i~~~d~~~~~~~~~~~--------------------~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 195 GTKLWTGGLDN-----------TVRSWDLREGRQLQQHD--------------------FTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp SSEEEEEETTS-----------EEEEEETTTTEEEEEEE--------------------CSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEecCC-----------cEEEEECCCCceEeeec--------------------CCCceEEEEECCCCCEEEEEc
Confidence 99888766542 48888987754321100 001244667999998666544
Q ss_pred eeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 352 IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 352 ~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
. .+ .+..+|+.+++...+......+....|+++++.++.... -..|.+.++.+
T Consensus 244 ~-~~--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~ 296 (337)
T 1gxr_A 244 E-SS--NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK----DNLLNAWRTPY 296 (337)
T ss_dssp T-TS--CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTT
T ss_pred C-CC--cEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecC----CCcEEEEECCC
Confidence 3 33 577778888888777666555555678888887664442 23466666543
No 249
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.36 E-value=4.1e-11 Score=128.11 Aligned_cols=252 Identities=13% Similarity=0.043 Sum_probs=156.6
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCc--cccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
+...+||| +..+++....+ + .++..+ .+++..+...... ... +.+..+.|+|||+.++...
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~-~--~i~~~d~~~g~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~s~~------ 188 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED-E--GMDVLDINSGQTVRLSPPEKYKKKL------GFVETISIPEHNELWVSQM------ 188 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS-S--SEEEEETTTCCEEEECCCHHHHTTC------CEEEEEEEGGGTEEEEEEG------
T ss_pred ceEEEEeC-CCeEEEEeCCC-C--eEEEEECCCCeEeeecCcccccccC------CceeEEEEcCCCEEEEEEC------
Confidence 55789999 55666665432 2 355444 5555554332211 111 1236889999987554431
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
....|++||+++++..... ......+..++|+|||+.
T Consensus 189 --------------------------------------~d~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---- 225 (433)
T 3bws_A 189 --------------------------------------QANAVHVFDLKTLAYKATV-DLTGKWSKILLYDPIRDL---- 225 (433)
T ss_dssp --------------------------------------GGTEEEEEETTTCCEEEEE-ECSSSSEEEEEEETTTTE----
T ss_pred --------------------------------------CCCEEEEEECCCceEEEEE-cCCCCCeeEEEEcCCCCE----
Confidence 1267999999987765431 223345678899999997
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
++++.. ....|+++|+ .+++...............|+|||+.|+..+..
T Consensus 226 l~~~~~--------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 226 VYCSNW--------------ISEDISVIDR-----------------KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EEEEET--------------TTTEEEEEET-----------------TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEE
T ss_pred EEEEec--------------CCCcEEEEEC-----------------CCCcEEEEecCCCCceEEEEcCCCCEEEEEECC
Confidence 666542 2237999997 556555544445567889999999999887754
Q ss_pred CCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 282 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 282 ~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
.... ......|+++|+.+++........ ..+..++|+||++.++++....+ .++.
T Consensus 275 ~~~~---~~~dg~i~~~d~~~~~~~~~~~~~--------------------~~~~~~~~~~~g~~l~~~~~~~~--~v~v 329 (433)
T 3bws_A 275 ASNQ---ESGGGRLGIYSMDKEKLIDTIGPP--------------------GNKRHIVSGNTENKIYVSDMCCS--KIEV 329 (433)
T ss_dssp SCTT---CSCCEEEEEEETTTTEEEEEEEEE--------------------ECEEEEEECSSTTEEEEEETTTT--EEEE
T ss_pred CCcc---ccCCCeEEEEECCCCcEEeeccCC--------------------CCcceEEECCCCCEEEEEecCCC--EEEE
Confidence 3210 012347999998875432211000 02335679999998887765444 6777
Q ss_pred EECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCC-----------CeEEEEeecc
Q 005093 362 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDV-----------PQVKYGYFVD 411 (715)
Q Consensus 362 ~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p-----------~~l~~~~~~~ 411 (715)
+|+.+++...............++++++.+++........ ..|++.++.+
T Consensus 330 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 330 YDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred EECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 8998888766555444445567888888887776554332 3677777543
No 250
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.35 E-value=5.4e-11 Score=124.07 Aligned_cols=199 Identities=16% Similarity=0.143 Sum_probs=124.5
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.+...+|||||++||...... .....+| .+++..........+ ..+.|||||++|+..+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~---d~~i~iwd~~~~~~~~~~~~~~~V----------~~v~fspdg~~l~s~s~----- 196 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV---PAIMRIIDPSDLTEKFEIETRGEV----------KDLHFSTDGKVVAYITG----- 196 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS---SCEEEEEETTTTEEEEEEECSSCC----------CEEEECTTSSEEEEECS-----
T ss_pred CEEEEEEcCCCCEEEEEECCC---CCEEEEeECCCCcEEEEeCCCCce----------EEEEEccCCceEEeccc-----
Confidence 356789999999998765432 2345667 344444333322222 79999999999988632
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCCCCCccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
..+.+|+..+++... .+.......+..++|+|||+.
T Consensus 197 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~--- 233 (365)
T 4h5i_A 197 ----------------------------------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV--- 233 (365)
T ss_dssp ----------------------------------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE---
T ss_pred ----------------------------------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE---
Confidence 336677776665432 211223345778899999998
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-----ceecCCCCccccceeEcCCCCeE
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~~~~~~~~spdg~~l 275 (715)
++..+.... ....++.+++ .... ...+......+...+|||||+.|
T Consensus 234 -l~~~s~d~~-----------~~~~i~~~~~-----------------~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l 284 (365)
T 4h5i_A 234 -LIAASLKKG-----------KGIVLTKISI-----------------KSGNTSVLRSKQVTNRFKGITSMDVDMKGELA 284 (365)
T ss_dssp -EEEEEESSS-----------CCEEEEEEEE-----------------ETTEEEEEEEEEEESSCSCEEEEEECTTSCEE
T ss_pred -EEEEecCCc-----------ceeEEeeccc-----------------ccceecceeeeeecCCCCCeEeEEECCCCCce
Confidence 776653221 1113555554 2222 23445556678889999999999
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
|..+.+. .|.++|+.+++... +.. .+...+..++|+|||+ ++++...+
T Consensus 285 asgs~D~-----------~V~iwd~~~~~~~~~~~~-------------------gH~~~V~~v~fSpdg~-~laS~S~D 333 (365)
T 4h5i_A 285 VLASNDN-----------SIALVKLKDLSMSKIFKQ-------------------AHSFAITEVTISPDST-YVASVSAA 333 (365)
T ss_dssp EEEETTS-----------CEEEEETTTTEEEEEETT-------------------SSSSCEEEEEECTTSC-EEEEEETT
T ss_pred EEEcCCC-----------EEEEEECCCCcEEEEecC-------------------cccCCEEEEEECCCCC-EEEEEeCC
Confidence 8877653 38888988755321 100 1222456788999998 55677777
Q ss_pred CeeEEEEEE
Q 005093 355 SSQVIISVN 363 (715)
Q Consensus 355 ~~~~l~~~d 363 (715)
+..+||.+.
T Consensus 334 ~tvrvw~ip 342 (365)
T 4h5i_A 334 NTIHIIKLP 342 (365)
T ss_dssp SEEEEEECC
T ss_pred CeEEEEEcC
Confidence 777777654
No 251
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.35 E-value=6.9e-11 Score=120.85 Aligned_cols=225 Identities=14% Similarity=0.108 Sum_probs=143.6
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEec-CccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+...+....|+|++..++-....+ ...+| ..++....... .... ..+.|||||++|+..+.
T Consensus 79 h~~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~g~~- 142 (321)
T 3ow8_A 79 HQLGVVSVDISHTLPIAASSSLDA-----HIRLWDLENGKQIKSIDAGPVDA----------WTLAFSPDSQYLATGTH- 142 (321)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCTTCC----------CCEEECTTSSEEEEECT-
T ss_pred CCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCEEEEEeCCCccE----------EEEEECCCCCEEEEEcC-
Confidence 346688999999999887665443 44566 34444333322 1122 68999999999887532
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
...+.+|++++++..... ......+..++|+|||+.
T Consensus 143 -------------------------------------------dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 143 -------------------------------------------VGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp -------------------------------------------TSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSSE
T ss_pred -------------------------------------------CCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCCE
Confidence 256899999887654331 233345778999999997
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
|+... .+..|.++|+ .+++ ...+......+..++|||||+.|+
T Consensus 179 ----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~l~~spd~~~l~ 222 (321)
T 3ow8_A 179 ----LASGA---------------IDGIINIFDI-----------------ATGKLLHTLEGHAMPIRSLTFSPDSQLLV 222 (321)
T ss_dssp ----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCCCEEEECTTSCEEE
T ss_pred ----EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEEcccCCceeEEEEcCCCCEEE
Confidence 77654 2236888887 4444 445666666788999999999887
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 355 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~ 355 (715)
..+.+. .|.++|+.+++... +.. +...+..++|+||++.| ++...++
T Consensus 223 s~s~dg-----------~i~iwd~~~~~~~~~~~~--------------------h~~~v~~~~~sp~~~~l-~s~s~D~ 270 (321)
T 3ow8_A 223 TASDDG-----------YIKIYDVQHANLAGTLSG--------------------HASWVLNVAFCPDDTHF-VSSSSDK 270 (321)
T ss_dssp EECTTS-----------CEEEEETTTCCEEEEECC--------------------CSSCEEEEEECTTSSEE-EEEETTS
T ss_pred EEcCCC-----------eEEEEECCCcceeEEEcC--------------------CCCceEEEEECCCCCEE-EEEeCCC
Confidence 666553 38888887644311 100 11134567899999855 4555454
Q ss_pred eeEEEEEECCCCcEEEec-CCCCCceeEEEeecCCEEEEEE
Q 005093 356 SQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 356 ~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
.+..+|+.+++..... .....+....|++++..|+...
T Consensus 271 --~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 271 --SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp --CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred --cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 4555688787765543 3333444567788877665433
No 252
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.35 E-value=1.9e-12 Score=130.06 Aligned_cols=148 Identities=14% Similarity=0.086 Sum_probs=98.3
Q ss_pred CCCCCceEEEEEeChhHHHHHHHHhhCCCcee-EEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhHH
Q 005093 555 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFV-AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 633 (715)
Q Consensus 555 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (715)
..+|++||+|+|+|+||++++.++..+|++|+ +++++++...... .+... ...+.. .+...+..+...
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~----~~~~~---~~~~~~----~~~~~~~~~~~~ 74 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCA----RNQYY---TSCMYN----GYPSITTPTANM 74 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTT----SSSCG---GGGSTT----CCCCCHHHHHHH
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEeccccccc----chHHH---HHHhhc----cCCCCCCHHHHH
Confidence 45899999999999999999999999999999 8777665321110 00000 000000 000001111112
Q ss_pred HHHhcCchhhccCCC-CcEEEEeeCCCCcCCchHHHHHHHHHHHcCC--cEEEEEeCCCCccCCCCCc------------
Q 005093 634 RFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGV--ETKVIVFPNDVHGIERPQS------------ 698 (715)
Q Consensus 634 ~~~~~sp~~~~~~i~-~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~--~~~~~~~~~~~H~~~~~~~------------ 698 (715)
.....+++..+.+++ +|+||+||++|.+||++++++++++|++.+. +++++.+++++|.+.....
T Consensus 75 ~~~~~~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~ 154 (318)
T 2d81_A 75 KSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTS 154 (318)
T ss_dssp HHHBTTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCT
T ss_pred HHhhcccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCC
Confidence 222214444444443 6999999999999999999999999998874 7999999999998653321
Q ss_pred ------hHHHHHHHHHHHHHh
Q 005093 699 ------DFESFLNIGLWFKKY 713 (715)
Q Consensus 699 ------~~~~~~~i~~wl~~~ 713 (715)
..+...+|++||...
T Consensus 155 pyi~~~~~d~~~~i~~ff~g~ 175 (318)
T 2d81_A 155 PYISNCNYDGAGAALKWIYGS 175 (318)
T ss_dssp TCEEECSSCHHHHHHHHHHSS
T ss_pred CcccCCCChHHHHHHHHHhcc
Confidence 246778899999543
No 253
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.33 E-value=6.6e-13 Score=143.93 Aligned_cols=221 Identities=14% Similarity=0.079 Sum_probs=130.0
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHH-HHhCCcEEEEEcCCCCC-CCchhhhhcCCCCC
Q 005093 460 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAF-LSSVGYSLLIVNYRGSL-GFGEEALQSLPGKV 536 (715)
Q Consensus 460 ~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~-~~~~~~~~-la~~G~~vi~~d~rG~~-~~g~~~~~~~~~~~ 536 (715)
.|.+. ..+|.|.+....++.|+||++|||++..... .+...... .+..|++|+.+|||... ||+........ ..
T Consensus 83 edcl~--l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~~ 159 (522)
T 1ukc_A 83 EDCLF--INVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQN-GD 159 (522)
T ss_dssp SCCCE--EEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHS-SC
T ss_pred CcCCE--EEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhcccc-CC
Confidence 34444 4688897654556789999999998765433 22221111 13579999999999422 23322111111 11
Q ss_pred CccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhC----CCceeEEEecCCcchhhhhccCCCCCCc
Q 005093 537 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDW 609 (715)
Q Consensus 537 ~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~~~~~~~~~~~~~~~~~~ 609 (715)
+...+.|+.++++|+.++. ..|+++|.|+|+|+||.++..++... +.+|+++|+.+|....... .....+
T Consensus 160 ~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~---~~~~~~ 236 (522)
T 1ukc_A 160 LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRT---VSEMEF 236 (522)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCC---SGGGHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCC---HHHHHH
Confidence 2334889999999998863 36999999999999999887776543 5689999999986532100 000000
Q ss_pred ---eeeeccCCCCCCCCCCCCChhhHHHHHhcCchhhc---------cCCCCc--EEEEeeCCCCcCCchHHHHHHHHHH
Q 005093 610 ---CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---------SKVKTP--TIFLLGAQDLRVPVSNGLQYARALR 675 (715)
Q Consensus 610 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---------~~i~~P--~Lii~G~~D~~v~~~~~~~~~~~l~ 675 (715)
.+....+.. ...+..+.+...++...+ .....| .+..+...|..+.+++..++.+.-+
T Consensus 237 ~~~~~~~~~gc~--------~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~ 308 (522)
T 1ukc_A 237 QFERFVNDTGCS--------SARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGN 308 (522)
T ss_dssp HHHHHHHHTTCT--------TCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTC
T ss_pred HHHHHHHHcCCC--------CHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCC
Confidence 011111110 001122223322221110 112233 4556677787777777777766655
Q ss_pred HcCCcEEEEEeCCCCccCC
Q 005093 676 EKGVETKVIVFPNDVHGIE 694 (715)
Q Consensus 676 ~~g~~~~~~~~~~~~H~~~ 694 (715)
..++++.+-...+++|.+.
T Consensus 309 ~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 309 FIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp SCCCCEEEEEETBGGGGTS
T ss_pred CCCCCEEEEeecchhHHhh
Confidence 5567777777888999775
No 254
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.33 E-value=2.8e-10 Score=118.68 Aligned_cols=299 Identities=12% Similarity=0.056 Sum_probs=144.3
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCC
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYAD 96 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (715)
.|+.++++....+...+...+. .........++||||++|+..... .-.+|.+..+|+..++...... +
T Consensus 15 ~i~~~~~d~~~g~l~~~~~~~~-~~~~~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~~~--g----- 83 (365)
T 1jof_A 15 AIFTVQFDDEKLTCKLIKRTEI-PQDEPISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHPIG--G----- 83 (365)
T ss_dssp EEEEEEEETTTTEEEEEEEEEC-CTTCCCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEECC--S-----
T ss_pred cEEEEEEECCCCCEEEeeEEcc-CCCCCCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEeecC--C-----
Confidence 5777777655443333322110 112356788999999988655432 2223333225655444332210 1
Q ss_pred CcccceeecCCCCeE-EEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-CCce
Q 005093 97 GWFEGISWNSDETLI-AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEV 174 (715)
Q Consensus 97 ~~~~~~~wSpDg~~l-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~g~~ 174 (715)
....+.|||||++| ++.+...... .+. .+.+. ....+.+|+++ .|+.
T Consensus 84 -~~~~~~~spdg~~l~~~~~~~~~~~-------------------------~~~---~~~~~--~~g~v~v~~~~~~g~~ 132 (365)
T 1jof_A 84 -HPRANDADTNTRAIFLLAAKQPPYA-------------------------VYA---NPFYK--FAGYGNVFSVSETGKL 132 (365)
T ss_dssp -SGGGGCTTSCCEEEEEEECSSTTCC-------------------------EEE---EEESS--SCCEEEEEEECTTCCE
T ss_pred -CCccEEECCCCCEEEEEEecCCcce-------------------------ecc---ceeec--CCceEEEEccCCCCcC
Confidence 11578999999974 4544311000 000 00000 12457777775 3544
Q ss_pred E-eecCC--CCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC-C
Q 005093 175 Q-AVKGI--PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-D 250 (715)
Q Consensus 175 ~-~l~~~--~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~ 250 (715)
. .+... ........++|||||+. |+.+. . ....|+++++ + +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~spdG~~----l~~~~-~-------------~~~~v~~~~~-----------------~~~ 177 (365)
T 1jof_A 133 EKNVQNYEYQENTGIHGMVFDPTETY----LYSAD-L-------------TANKLWTHRK-----------------LAS 177 (365)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSE----EEEEE-T-------------TTTEEEEEEE-----------------CTT
T ss_pred cceEeeEEeCCCCcceEEEECCCCCE----EEEEc-C-------------CCCEEEEEEE-----------------CCC
Confidence 3 22100 12234667899999996 65442 2 1236888887 4 4
Q ss_pred CCceec---C--CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCC
Q 005093 251 LPVVNL---T--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD 325 (715)
Q Consensus 251 ~~~~~l---t--~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~ 325 (715)
++.+.+ . .........+|||||++|+...... ..-.+|.++..+++.... . ..+........+
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--------~~v~v~~~~~~~g~~~~~---~-~~~~~~~~~~~g 245 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--------NRICEYVIDPATHMPVYT---H-HSFPLIPPGIPD 245 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--------TEEEEEEECTTTCCEEEE---E-EEEESSCTTCCC
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--------CeEEEEEEeCCCCcEEEc---c-ceEEcCCCCcCC
Confidence 554322 1 1123467789999999887765442 122344444333332100 0 000110000000
Q ss_pred Cc---cccccCCCCCCc-cccCCCEEEEEeeeCC-----eeEEEEEECCCCcEEEe---cC-CCCCceeEEEee---cCC
Q 005093 326 CF---PGLYSSSILSNP-WLSDGCTMLLSSIWGS-----SQVIISVNVSSGELLRI---TP-AESNFSWSLLTL---DGD 389 (715)
Q Consensus 326 ~~---~g~~~~~~~~~~-~~~dg~~l~~~~~~~~-----~~~l~~~d~~tg~~~~l---~~-~~~~~~~~~~s~---~~~ 389 (715)
.. .+ ......++ |+|||+.|+.+..... ...+|.++. +|+.+.+ .. .........++| +++
T Consensus 246 ~~~~~~~--~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~ 322 (365)
T 1jof_A 246 RDPETGK--GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp BCTTTSS--BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TSCEEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred ccccccc--ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CCCEEEeeeeeecCCCCcccceecCCCcCCC
Confidence 00 00 00134577 9999998876554333 344554442 6776642 21 111123357888 788
Q ss_pred EEEEEEeCCCCCCeEEEEeec
Q 005093 390 NIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 390 ~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.|++..... ..|.+++++
T Consensus 323 ~l~v~~~~~---~~v~v~~~~ 340 (365)
T 1jof_A 323 WMAITDDQE---GWLEIYRWK 340 (365)
T ss_dssp EEEEECSSS---CEEEEEEEE
T ss_pred EEEEEEcCC---CeEEEEEEc
Confidence 876554322 345555543
No 255
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.33 E-value=9.1e-11 Score=122.06 Aligned_cols=243 Identities=14% Similarity=0.149 Sum_probs=146.1
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+...+|||||++|+.....+ ...+| ..++....... ..+ .+..+.|+|||++|+..+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~---h~~------~v~~~~~~~~~~~l~s~~~---- 94 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDS-----SASVWYSLNGERLGTLDG---HTG------TIWSIDVDCFTKYCVTGSA---- 94 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSS-----CEEEEETTTCCEEEEECC---CSS------CEEEEEECTTSSEEEEEET----
T ss_pred ceEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCchhhhhhhh---cCC------cEEEEEEcCCCCEEEEEeC----
Confidence 6789999999999998775542 23445 34444433321 111 2378999999998887532
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...|.+||+.+++.... ......+..+.|+|+|+.
T Consensus 95 ----------------------------------------dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~--- 129 (369)
T 3zwl_B 95 ----------------------------------------DYSIKLWDVSNGQCVAT--WKSPVPVKRVEFSPCGNY--- 129 (369)
T ss_dssp ----------------------------------------TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSSE---
T ss_pred ----------------------------------------CCeEEEEECCCCcEEEE--eecCCCeEEEEEccCCCE---
Confidence 25699999998887655 234556788999999997
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCc--cccceeEcCCCCeEEEE
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~~~~spdg~~l~~~ 278 (715)
++....... .....|.++|+..... ...+. .........+..... .+....|+|||+.|+..
T Consensus 130 -l~~~~~~~~----------~~~g~i~~~d~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 130 -FLAILDNVM----------KNPGSINIYEIERDSA-THELT----KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp -EEEEECCBT----------TBCCEEEEEEEEECTT-TCCEE----EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred -EEEecCCcc----------CCCCEEEEEEecCCcc-ceeec----ccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 776652210 0113566666510000 00000 000112223333333 67889999999988876
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
+.+. .|+++|+.++.... ..... +...+..+.|+||++.|+.. ..++ .
T Consensus 194 ~~dg-----------~i~i~d~~~~~~~~---------~~~~~---------~~~~v~~~~~~~~~~~l~~~-~~d~--~ 241 (369)
T 3zwl_B 194 HKDG-----------KISKYDVSNNYEYV---------DSIDL---------HEKSISDMQFSPDLTYFITS-SRDT--N 241 (369)
T ss_dssp ETTS-----------EEEEEETTTTTEEE---------EEEEC---------CSSCEEEEEECTTSSEEEEE-ETTS--E
T ss_pred cCCC-----------EEEEEECCCCcEeE---------EEEec---------CCCceeEEEECCCCCEEEEe-cCCc--e
Confidence 6542 48888987632110 00000 11134567899999866544 3333 6
Q ss_pred EEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEe
Q 005093 359 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
|..+|+.+++...............+++++..+++...
T Consensus 242 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC
T ss_pred EEEEECCCCceeeeecCCCCceeEEecCCCceEEEeec
Confidence 77789988887766655554555678888887776654
No 256
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.33 E-value=2.1e-10 Score=118.07 Aligned_cols=217 Identities=10% Similarity=0.014 Sum_probs=126.8
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
.+...+|||||++|++....+ +.-.+|.+. .+............ .....+.|||||++|+.....
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~-~~i~~~d~~-~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~------ 149 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNA-GNVSVTRLE-DGLPVGVVDVVEGL-------DGCHSANISPDNRTLWVPALK------ 149 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTT-TEEEEEEEE-TTEEEEEEEEECCC-------TTBCCCEECTTSSEEEEEEGG------
T ss_pred CCcEEEEcCCCCEEEEEecCC-CeEEEEECC-CCccccccccccCC-------CCceEEEECCCCCEEEEecCC------
Confidence 567889999999988775533 322333332 33322222211111 112689999999988765321
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC-CceEeec----CCCCCCccceEEEecCCCCC
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVK----GIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-g~~~~l~----~~~~~~~~~~~~~spdg~~~ 198 (715)
...|++||+++ ++...+. ..........+.|+|||+.
T Consensus 150 -------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~- 191 (343)
T 1ri6_A 150 -------------------------------------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY- 191 (343)
T ss_dssp -------------------------------------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE-
T ss_pred -------------------------------------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE-
Confidence 25699999987 7654220 0222334567899999997
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee---c---CCC---CccccceeEc
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN---L---TES---ISSAFFPRFS 269 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l---t~~---~~~~~~~~~s 269 (715)
++++.. ....|.+++++ ..+++.+. + ... ......++|+
T Consensus 192 ---l~~~~~--------------~~~~i~~~~~~---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 192 ---AYCVNE--------------LNSSVDVWELK---------------DPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp ---EEEEET--------------TTTEEEEEESS---------------CTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred ---EEEEeC--------------CCCEEEEEEec---------------CCCCcEEEEeeccccCccccccCCccceEEC
Confidence 666542 22357777751 02233221 1 111 1134468999
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecCC--CCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEE
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 347 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l 347 (715)
|||++|++....+ ..|.++++.. +..+.+ ..+... ..+..++|+|||+.+
T Consensus 240 ~dg~~l~v~~~~~----------~~i~v~d~~~~~~~~~~~--------~~~~~~----------~~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 240 PDGRHLYACDRTA----------SLITVFSVSEDGSVLSKE--------GFQPTE----------TQPRGFNVDHSGKYL 291 (343)
T ss_dssp TTSSEEEEEETTT----------TEEEEEEECTTSCCEEEE--------EEEECS----------SSCCCEEECTTSSEE
T ss_pred CCCCEEEEEecCC----------CEEEEEEEcCCCCceEEe--------eeecCC----------CccceEEECCCCCEE
Confidence 9999886655332 3577888763 221111 000000 124567899999988
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 348 LLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 348 ~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
++.....+...+|.+|.++|+.+.+.
T Consensus 292 ~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 292 IAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEecCCCCeEEEEEEcCCCceeeEcc
Confidence 77766667788999999888776553
No 257
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.32 E-value=7.7e-12 Score=124.11 Aligned_cols=103 Identities=12% Similarity=0.039 Sum_probs=69.7
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 557 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 557 (715)
.+..|.||++||++.. ...|..+.. | ..+|.|+++|++| ++.+.. ....++++.+.+..++... .
T Consensus 18 ~~~~~~lv~lhg~~~~--~~~~~~~~~-l-~~~~~v~~~d~~G---~~~~~~-------~~~~~~~~~~~~~~~i~~~-~ 82 (265)
T 3ils_A 18 MVARKTLFMLPDGGGS--AFSYASLPR-L-KSDTAVVGLNCPY---ARDPEN-------MNCTHGAMIESFCNEIRRR-Q 82 (265)
T ss_dssp TTSSEEEEEECCTTCC--GGGGTTSCC-C-SSSEEEEEEECTT---TTCGGG-------CCCCHHHHHHHHHHHHHHH-C
T ss_pred CCCCCEEEEECCCCCC--HHHHHHHHh-c-CCCCEEEEEECCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh-C
Confidence 3456889999997654 445666666 5 6789999999999 332211 1123444444333333221 1
Q ss_pred CCceEEEEEeChhHHHHHHHHh---hCCCceeEEEecCCcc
Q 005093 558 NPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLC 595 (715)
Q Consensus 558 d~~~i~l~G~S~GG~~a~~~a~---~~p~~~~~~v~~~~~~ 595 (715)
...++.++||||||.+++.++. .++++++++|++++..
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~ 123 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPI 123 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCS
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCC
Confidence 2358999999999999999987 6788899999887643
No 258
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.31 E-value=1.3e-10 Score=119.92 Aligned_cols=261 Identities=8% Similarity=0.013 Sum_probs=143.7
Q ss_pred EeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCc--cccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 48 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
++++++++.++..... ..++.++ .+++..+.+.... .. ..+.|||||+++++...
T Consensus 5 ~~~~~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~~-------- 62 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLNN-------- 62 (349)
T ss_dssp CCCCTTCEEEEEEETT----TEEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEET--------
T ss_pred ccccCCCEEEEEeCCC----CeEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEeC--------
Confidence 4677777655443332 3677666 5666665555443 33 68999999998777532
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC-----CCccceEEEecCCCCCc
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-----~~~~~~~~~spdg~~~~ 199 (715)
....|+++|+++++......... ......+.|||||+.
T Consensus 63 -----------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-- 105 (349)
T 1jmx_B 63 -----------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-- 105 (349)
T ss_dssp -----------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE--
T ss_pred -----------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE--
Confidence 12679999999887654310111 122567899999997
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee---cCCCCccccceeEcCCCCeEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN---LTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---lt~~~~~~~~~~~spdg~~l~ 276 (715)
|++........+..+ ......|+++|+ ++++... ...........+|||||+ |+
T Consensus 106 --l~~~~~~~~~~~~~~---~~~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 106 --VYATVNPTQRLNDHY---VVKPPRLEVFST-----------------ADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp --EEEEEEEEEECSSCE---EECCCEEEEEEG-----------------GGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred --EEEEccccccccccc---ccCCCeEEEEEC-----------------CCccccceeeeccCCCcccceeECCCCc-EE
Confidence 777653200000001 012347999997 4433221 112223456677999999 65
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCC-ccccee------------------------eeeeceecC---------
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIV------------------------DVIPVVQCA--------- 322 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~------------------------~~~~~~~~~--------- 322 (715)
..+ . +|+++|+.+++... +..... ....+....
T Consensus 163 ~~~-~------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 163 VAG-P------------DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp EES-S------------SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred Ecc-C------------cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 421 1 27888877655321 111100 000000000
Q ss_pred -----------CCCCccc----cccCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEee
Q 005093 323 -----------EGDCFPG----LYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 386 (715)
Q Consensus 323 -----------~~~~~~g----~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~ 386 (715)
......- ........++|+| ||+.+++. ...|+.+|+.+++...............+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 304 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFDK 304 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEECC
Confidence 0000000 0000123456789 99977766 4589999999998765544333234467899
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 387 DGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 387 ~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+++.|++. +. ...|.+.+..++
T Consensus 305 dg~~l~~~--~~--~~~v~v~d~~~~ 326 (349)
T 1jmx_B 305 KGDKLYLG--GT--FNDLAVFNPDTL 326 (349)
T ss_dssp SSSCEEEE--SB--SSEEEEEETTTT
T ss_pred CCCEEEEe--cC--CCeEEEEecccc
Confidence 98888763 22 267888886543
No 259
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.31 E-value=7.2e-11 Score=131.41 Aligned_cols=221 Identities=20% Similarity=0.198 Sum_probs=142.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEe-cCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
..+...++||||++|+.....+ ...+| ..++...... .... +..+.|||||++|+..+.+
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~~~~~~~~~~~~----------v~~~~~s~dg~~l~~~~~d--- 406 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQTLTGHSSS----------VRGVAFSPDGQTIASASDD--- 406 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTCCEEEEEECCSSC----------EEEEEECTTSSCEEEEETT---
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCCEEEEecCCCCC----------eEEEEECCCCCEEEEEeCC---
Confidence 5578899999999998776543 34456 4444333222 1222 3789999999999875322
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
..|.+||.++.....+ ......+..++|+||++.
T Consensus 407 -----------------------------------------~~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~--- 440 (577)
T 2ymu_A 407 -----------------------------------------KTVKLWNRNGQLLQTL--TGHSSSVWGVAFSPDDQT--- 440 (577)
T ss_dssp -----------------------------------------SEEEEECTTCCEEEEE--ECCSSCEEEEEECTTSSE---
T ss_pred -----------------------------------------CEEEEEeCCCCEEEEe--cCCCCCeEEEEECCCCCE---
Confidence 5688888766555556 333445778999999997
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+... .+..|.++|+ .+.....+......+...+|||||+.|+..+.
T Consensus 441 -l~~~~---------------~d~~v~~w~~-----------------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 441 -IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp -EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred -EEEEc---------------CCCEEEEEEC-----------------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 77654 2235777785 55566677777777889999999999987665
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
+. .|.++|..+...+.+.. +...+..++|+|||+.| ++...++. |.
T Consensus 488 d~-----------~i~iw~~~~~~~~~~~~--------------------h~~~v~~l~~s~dg~~l-~s~~~dg~--v~ 533 (577)
T 2ymu_A 488 DK-----------TVKLWNRNGQLLQTLTG--------------------HSSSVRGVAFSPDGQTI-ASASDDKT--VK 533 (577)
T ss_dssp TS-----------EEEEEETTSCEEEEEEC--------------------CSSCEEEEEECTTSSCE-EEEETTSE--EE
T ss_pred CC-----------EEEEEcCCCCEEEEEeC--------------------CCCCEEEEEEcCCCCEE-EEEECcCE--EE
Confidence 42 47778854322111111 11234567899999855 45554554 55
Q ss_pred EEECCCCcEEEecCCCCCceeEEEeecCCEEEEE
Q 005093 361 SVNVSSGELLRITPAESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 361 ~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~ 394 (715)
.+|..+.....+......+....|++|++.|+..
T Consensus 534 lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 534 LWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp EECTTSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred EEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 5576444455555444445556788988876643
No 260
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.31 E-value=2.2e-10 Score=118.25 Aligned_cols=232 Identities=10% Similarity=0.022 Sum_probs=141.1
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEec-CccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
..+...+||||+ +|+..... +.-.+|.+ ..++....... ..+..+. +..++|||||++|+..+.+
T Consensus 83 ~~v~~~~~s~d~-~l~~~s~d--g~v~lWd~-~~~~~~~~~~~~~~~H~~~------V~~v~~spdg~~l~sgs~d---- 148 (344)
T 4gqb_B 83 AGVADLTWVGER-GILVASDS--GAVELWEL-DENETLIVSKFCKYEHDDI------VSTVSVLSSGTQAVSGSKD---- 148 (344)
T ss_dssp SCEEEEEEETTT-EEEEEETT--SEEEEEEE-CTTSSCEEEEEEEECCSSC------EEEEEECTTSSEEEEEETT----
T ss_pred CCEEEEEEeCCC-eEEEEECC--CEEEEEec-cCCCceeEeeccccCCCCC------EEEEEECCCCCEEEEEeCC----
Confidence 357889999997 45544333 33233333 33333322221 1122122 3799999999998875332
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
..|.+||+++++..... ......+..+.|+|+++.
T Consensus 149 ----------------------------------------~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~---- 183 (344)
T 4gqb_B 149 ----------------------------------------ICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDS---- 183 (344)
T ss_dssp ----------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTT----
T ss_pred ----------------------------------------CeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCC----
Confidence 56999999998765431 233446778999999998
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCC--CCccccceeEcCCCCeEEEE
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--SISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~~~~~~~spdg~~l~~~ 278 (715)
++.++.. +..|.++|+ .+++. ..+.. .........|+|++..++.+
T Consensus 184 ~l~s~s~--------------D~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 184 VFLSCSE--------------DNRILLWDT-----------------RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp EEEEEET--------------TSCEEEEET-----------------TSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred ceeeecc--------------ccccccccc-----------------cccceeeeeecceeeccceeeeecCCCCcceEE
Confidence 7766532 235778887 44443 33332 22346778999977655444
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
...+ ..|.++|+.+++... +.. +...+..++|+|||..++++...++.
T Consensus 233 g~~d----------g~v~~wd~~~~~~~~~~~~--------------------h~~~v~~v~fsp~g~~~lasgs~D~~- 281 (344)
T 4gqb_B 233 GDEN----------GTVSLVDTKSTSCVLSSAV--------------------HSQCVTGLVFSPHSVPFLASLSEDCS- 281 (344)
T ss_dssp EETT----------SEEEEEESCC--CCEEEEC--------------------CSSCEEEEEECSSSSCCEEEEETTSC-
T ss_pred eccC----------CcEEEEECCCCcEEEEEcC--------------------CCCCEEEEEEccCCCeEEEEEeCCCe-
Confidence 4332 248888987755321 110 11234567899999777777766654
Q ss_pred EEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEe
Q 005093 358 VIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 358 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
|..+|+.+++...+......+....|++++..++++.+
T Consensus 282 -i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 282 -LAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp -EEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred -EEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 44558889988777655554555678888887766554
No 261
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.30 E-value=4.1e-12 Score=128.79 Aligned_cols=215 Identities=14% Similarity=0.063 Sum_probs=125.0
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-ch-HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccch
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 541 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~-~~-~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~ 541 (715)
.+.+.++.|..+. .+..+.||++||.... ... |. .+...|+++||.|+++|+|| +|.... ....
T Consensus 15 ~l~~~i~~p~~~~-~~~~~~VvllHG~~~~--~~~~~~~~l~~~L~~~G~~v~~~d~~g---~g~~~~--------~~~~ 80 (317)
T 1tca_A 15 VLDAGLTCQGASP-SSVSKPILLVPGTGTT--GPQSFDSNWIPLSTQLGYTPCWISPPP---FMLNDT--------QVNT 80 (317)
T ss_dssp HHHHTEEETTBCT-TSCSSEEEEECCTTCC--HHHHHTTTHHHHHHTTTCEEEEECCTT---TTCSCH--------HHHH
T ss_pred HHhheeeCCCCCC-CCCCCeEEEECCCCCC--cchhhHHHHHHHHHhCCCEEEEECCCC---CCCCcH--------HHHH
Confidence 3445577776553 2345679999996544 233 66 67888999999999999998 432210 1125
Q ss_pred hhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcchhhhhccCCCCCCceeeeccCCC
Q 005093 542 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 618 (715)
Q Consensus 542 ~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (715)
+++.++++.+.+.. ..+++.|+||||||.++..++..++ ++++++|+++|............. +. ....
T Consensus 81 ~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~--~~----~~~~ 152 (317)
T 1tca_A 81 EYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDA--LA----VSAP 152 (317)
T ss_dssp HHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHH--TT----CBCH
T ss_pred HHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhh--hh----hcCc
Confidence 67788888887763 3478999999999999998888765 789999999986532211100000 00 0000
Q ss_pred CCCCCCCCCChhhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchH--HHHHHHHHHHcCCcEEEEEe-------CCC
Q 005093 619 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN--GLQYARALREKGVETKVIVF-------PND 689 (715)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~--~~~~~~~l~~~g~~~~~~~~-------~~~ 689 (715)
..... .........+.... .....+|+++++|..|.+|++.. +......+. +. +.+.+ ++.
T Consensus 153 ~~~~~--~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~--~a--~~~~~~~~~~~~~~~ 222 (317)
T 1tca_A 153 SVWQQ--TTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF--NG--KNVQAQAVCGPLFVI 222 (317)
T ss_dssp HHHHT--BTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB--TS--EEEEHHHHHCTTCCC
T ss_pred hHHhh--CcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeECCccccccchhhhcc--CC--ccEEeeeccCCCCcc
Confidence 00000 00001111111110 01236899999999999998765 111111121 11 22222 577
Q ss_pred CccCCCCCchHHHHHHHHHHHHH
Q 005093 690 VHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 690 ~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+|...... ...+..+++||+.
T Consensus 223 gH~~~l~~--p~~~~~v~~~L~~ 243 (317)
T 1tca_A 223 DHAGSLTS--QFSYVVGRSALRS 243 (317)
T ss_dssp CTTHHHHB--HHHHHHHHHHHHC
T ss_pred CcccccCC--HHHHHHHHHHhcC
Confidence 89644222 2457788898875
No 262
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.30 E-value=6.9e-11 Score=120.85 Aligned_cols=214 Identities=14% Similarity=0.139 Sum_probs=132.3
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (715)
....|.++|+.++.. ...+...+ ..+...+|||||++|+.....+ ...+| ..++..........
T Consensus 100 ~D~~i~lWd~~~~~~-~~~~~~~~-----~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~~~~~~~~~~~--- 165 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQ-IKSIDAGP-----VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGKKEYSLDTRGK--- 165 (321)
T ss_dssp TTSEEEEEETTTTEE-EEEEECCT-----TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTCSEEEEEECSSS---
T ss_pred CCCcEEEEECCCCCE-EEEEeCCC-----ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCceeEEecCCCc---
Confidence 344566666654421 12222222 4567789999999998765442 23444 34443333222111
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
.+..+.|||||++|+..+.+ ..|.+||+.+
T Consensus 166 ------~v~~~~~spdg~~lasg~~d--------------------------------------------g~i~iwd~~~ 195 (321)
T 3ow8_A 166 ------FILSIAYSPDGKYLASGAID--------------------------------------------GIINIFDIAT 195 (321)
T ss_dssp ------CEEEEEECTTSSEEEEEETT--------------------------------------------SCEEEEETTT
T ss_pred ------eEEEEEECCCCCEEEEEcCC--------------------------------------------CeEEEEECCC
Confidence 22689999999999875332 5699999998
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
++..... ......+..++|+|||+. |+..+ .+..|.++|+ ..+
T Consensus 196 ~~~~~~~-~~h~~~v~~l~~spd~~~----l~s~s---------------~dg~i~iwd~-----------------~~~ 238 (321)
T 3ow8_A 196 GKLLHTL-EGHAMPIRSLTFSPDSQL----LVTAS---------------DDGYIKIYDV-----------------QHA 238 (321)
T ss_dssp TEEEEEE-CCCSSCCCEEEECTTSCE----EEEEC---------------TTSCEEEEET-----------------TTC
T ss_pred CcEEEEE-cccCCceeEEEEcCCCCE----EEEEc---------------CCCeEEEEEC-----------------CCc
Confidence 8765431 233446788999999986 66544 2235778886 433
Q ss_pred -CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccc
Q 005093 252 -PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 252 -~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g 329 (715)
....+......+..++|+|||+.|+..+.+. .|.++|+.++.... +..
T Consensus 239 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~-----------~v~iwd~~~~~~~~~~~~------------------- 288 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK-----------SVKVWDVGTRTCVHTFFD------------------- 288 (321)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----------CEEEEETTTTEEEEEECC-------------------
T ss_pred ceeEEEcCCCCceEEEEECCCCCEEEEEeCCC-----------cEEEEeCCCCEEEEEEcC-------------------
Confidence 3445666677788999999999988776553 48888887644311 100
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
+...+..+.|++||+.| ++...++..+||
T Consensus 289 -h~~~v~~v~~s~~g~~l-~s~~~d~~i~vw 317 (321)
T 3ow8_A 289 -HQDQVWGVKYNGNGSKI-VSVGDDQEIHIY 317 (321)
T ss_dssp -CSSCEEEEEECTTSSEE-EEEETTCCEEEE
T ss_pred -CCCcEEEEEECCCCCEE-EEEeCCCeEEEE
Confidence 11134567899999855 555555555555
No 263
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.30 E-value=5.1e-12 Score=123.54 Aligned_cols=208 Identities=16% Similarity=0.181 Sum_probs=112.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+..|.||++||.+.. ...|...+..|+ .+|.|+++|+|| +|.+.. ....|+.+.++.+.+.-.+.
T Consensus 11 ~~~~~lv~lhg~g~~--~~~~~~~~~~L~-~~~~vi~~Dl~G---hG~S~~---------~~~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 11 SEKTQLICFPFAGGY--SASFRPLHAFLQ-GECEMLAAEPPG---HGTNQT---------SAIEDLEELTDLYKQELNLR 75 (242)
T ss_dssp TCCCEEESSCCCCHH--HHHHHHHHHHHC-CSCCCEEEECCS---SCCSCC---------CTTTHHHHHHHHTTTTCCCC
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHhCC-CCeEEEEEeCCC---CCCCCC---------CCcCCHHHHHHHHHHHHHhh
Confidence 445678999996544 446777788775 479999999999 555421 12456666666665432222
Q ss_pred -CceEEEEEeChhHHHHHHHHhh------CCCceeEEEecCCcchhhhhccCCCCCCceeeecc---CC--CC------C
Q 005093 559 -PSKVTVVGGSHGGFLTTHLIGQ------APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY---GS--KG------K 620 (715)
Q Consensus 559 -~~~i~l~G~S~GG~~a~~~a~~------~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~------~ 620 (715)
.+++.|+||||||.+|+.+|.+ +|+++-......|...... ............+ .. .. .
T Consensus 76 ~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (242)
T 2k2q_B 76 PDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKK---VSHLPDDQFLDHIIQLGGMPAELVENKEV 152 (242)
T ss_dssp CCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCC---CSSCTTHHHHHTTCCTTCCCCTTTHHHHT
T ss_pred cCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCccc---ccCCCHHHHHHHHHHhCCCChHHhcCHHH
Confidence 3689999999999999999876 5665321111111110000 0000000000000 00 00 0
Q ss_pred CCCCCCCCh-hhHHHHHhcCchhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCccCCCCCch
Q 005093 621 DSFTESPSV-EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD 699 (715)
Q Consensus 621 ~~~~~~~~~-~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 699 (715)
.... .+.. ........... ..+.++++|+|+++|++|..++ ... +.+.+.-...+++++++ ||....+ ..
T Consensus 153 ~~~~-~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~----~~~~~~~~~~~~~~~~~-gH~~~~e-~p 223 (242)
T 2k2q_B 153 MSFF-LPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDA----EGWKKWAKDITFHQFDG-GHMFLLS-QT 223 (242)
T ss_dssp TTTC-CSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHH----HHHHTTCCCSEEEEEEC-CCSHHHH-HC
T ss_pred HHHH-HHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHH----HHHHHHhcCCeEEEEeC-CceeEcC-CH
Confidence 0000 0000 11111111111 1256789999999999998753 222 22333323345778875 8965533 34
Q ss_pred HHHHHHHHHHHHHh
Q 005093 700 FESFLNIGLWFKKY 713 (715)
Q Consensus 700 ~~~~~~i~~wl~~~ 713 (715)
..+.+.+.+|+++.
T Consensus 224 ~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 224 EEVAERIFAILNQH 237 (242)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcc
Confidence 57888899998753
No 264
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.3e-10 Score=121.85 Aligned_cols=259 Identities=13% Similarity=0.056 Sum_probs=148.2
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEec-CCccEEEEe---cCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFH---VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.+...+|||||++|+++...+ +.-.+|.+.. +++..+.+. ....+ ..+.|+|||++|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v----------~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRP----------NAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCE----------EEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCc----------eEEEEcCCCCEEEEEeC---
Confidence 588999999999986665543 4444555441 455544442 12222 78999999999887532
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-----ecCCCCCCccceEEEecC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-----VKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-----l~~~~~~~~~~~~~~spd 194 (715)
...+++|++.+++... + ......+..+.|+||
T Consensus 170 -----------------------------------------~g~v~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 170 -----------------------------------------FGDVYSIDINSIPEEKFTQEPI--LGHVSMLTDVHLIKD 206 (450)
T ss_dssp -----------------------------------------TSEEEEEETTSCCCSSCCCCCS--EECSSCEEEEEEEEC
T ss_pred -----------------------------------------CCcEEEEecCCcccccccceee--ecccCceEEEEEcCC
Confidence 2568999998776542 2 112335778899999
Q ss_pred ---CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-cee-cCCCCccccceeEc
Q 005093 195 ---NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN-LTESISSAFFPRFS 269 (715)
Q Consensus 195 ---g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-lt~~~~~~~~~~~s 269 (715)
++. |+... .+..|+++|+ .++. ... +......+..+.||
T Consensus 207 ~~~~~~----l~s~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~h~~~v~~~~~s 250 (450)
T 2vdu_B 207 SDGHQF----IITSD---------------RDEHIKISHY-----------------PQCFIVDKWLFGHKHFVSSICCG 250 (450)
T ss_dssp TTSCEE----EEEEE---------------TTSCEEEEEE-----------------SCTTCEEEECCCCSSCEEEEEEC
T ss_pred CCCCcE----EEEEc---------------CCCcEEEEEC-----------------CCCceeeeeecCCCCceEEEEEC
Confidence 775 55443 2236778886 4444 333 44566778999999
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCC--CCCc----cccccCCCCCCccccC
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE--GDCF----PGLYSSSILSNPWLSD 343 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~--~~~~----~g~~~~~~~~~~~~~d 343 (715)
||+.|+..+.+ ..|.++|+.+++..........+..+..... ...| .......+..+.|+||
T Consensus 251 -d~~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 251 -KDYLLLSAGGD-----------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp -STTEEEEEESS-----------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred -CCCEEEEEeCC-----------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 99998877644 2588899887653211100000000000000 0000 0001123456789999
Q ss_pred CCEEEEEeeeCCeeEEEEE-ECCCCcE---EEecCCCCCceeEEEeecCCEEEEEEeCCCCCC------eEEEEeec
Q 005093 344 GCTMLLSSIWGSSQVIISV-NVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVP------QVKYGYFV 410 (715)
Q Consensus 344 g~~l~~~~~~~~~~~l~~~-d~~tg~~---~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~------~l~~~~~~ 410 (715)
++.+++.....+...||.+ +..++.. ..+... ..+....|++ +.++++..+...|. ++|.++..
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 9977766545555556655 2223222 223333 3333334555 56777777766664 67776644
No 265
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.28 E-value=6.9e-10 Score=115.34 Aligned_cols=244 Identities=10% Similarity=0.032 Sum_probs=153.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+...+|||||++|+.....+ ...+| .+++..........+ ..+.|+|||+.|+.......
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~~~~- 138 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADY-----SIKLWDVSNGQCVATWKSPVPV----------KRVEFSPCGNYFLAILDNVM- 138 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECSSCE----------EEEEECTTSSEEEEEECCBT-
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEeecCCCe----------EEEEEccCCCEEEEecCCcc-
Confidence 6789999999999998776543 34455 455555554433333 79999999999988754310
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce------------EeecCCCCCCccce
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV------------QAVKGIPKSLSVGQ 188 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~------------~~l~~~~~~~~~~~ 188 (715)
. ....|.+||+.++.. ..+........+..
T Consensus 139 ---------------------------------~-----~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 139 ---------------------------------K-----NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ---------------------------------T-----BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ---------------------------------C-----CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 0 226688888876532 11111122225778
Q ss_pred EEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC--CCceecCCCCccccce
Q 005093 189 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED--LPVVNLTESISSAFFP 266 (715)
Q Consensus 189 ~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lt~~~~~~~~~ 266 (715)
+.|+|||+. |+... .+..|.++|+ .+ .....+......+...
T Consensus 181 ~~~~~~~~~----l~~~~---------------~dg~i~i~d~-----------------~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 181 AGWSTKGKY----IIAGH---------------KDGKISKYDV-----------------SNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEECGGGCE----EEEEE---------------TTSEEEEEET-----------------TTTTEEEEEEECCSSCEEEE
T ss_pred EEEcCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCcEeEEEEecCCCceeEE
Confidence 899999997 66554 2246888887 33 3344555566778899
Q ss_pred eEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCE
Q 005093 267 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 346 (715)
Q Consensus 267 ~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~ 346 (715)
.|+|||+.|+..+.+. .|+++|+.++........ ...+..+.|+|+++.
T Consensus 225 ~~~~~~~~l~~~~~d~-----------~i~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 273 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDT-----------NSFLVDVSTLQVLKKYET--------------------DCPLNTAVITPLKEF 273 (369)
T ss_dssp EECTTSSEEEEEETTS-----------EEEEEETTTCCEEEEEEC--------------------SSCEEEEEECSSSSE
T ss_pred EECCCCCEEEEecCCc-----------eEEEEECCCCceeeeecC--------------------CCCceeEEecCCCce
Confidence 9999999988776542 488899877553211100 012345679999997
Q ss_pred EEEEeeeCC-----------eeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 347 MLLSSIWGS-----------SQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 347 l~~~~~~~~-----------~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
+++....++ ...+..+|..+++...... ....+....|+++++.|+....+ ..|.+.++..
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 274 IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp EEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred EEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 776654331 2267888888877665443 33345556788888766644322 2466666643
No 266
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.27 E-value=2.5e-10 Score=117.19 Aligned_cols=227 Identities=11% Similarity=0.014 Sum_probs=136.8
Q ss_pred eEEEEe-cCCccEEEEecCc---cccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCC
Q 005093 69 IQFELW-SQSQLEKEFHVPQ---TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 144 (715)
Q Consensus 69 ~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (715)
.++.++ .+++..+.+.... .. ..+.|||||++|++....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~--------------------------- 54 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTP----------MVPMVAPGGRIAYATVNK--------------------------- 54 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCC----------CCEEECTTSSEEEEEETT---------------------------
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCc----------cceEEcCCCCEEEEEeCC---------------------------
Confidence 566555 5566555555433 23 689999999988776421
Q ss_pred CCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCCC----CCccceEEEecCCCCCccEEEEEeecCccceeeeeee
Q 005093 145 QGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPK----SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 219 (715)
Q Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~----~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~ 219 (715)
...|++||+++++... +. ... ......+.|+|||+. |++.....+..+...
T Consensus 55 ----------------~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~----l~~~~~~~~~~~~~~--- 110 (337)
T 1pby_B 55 ----------------SESLVKIDLVTGETLGRID-LSTPEERVKSLFGAALSPDGKT----LAIYESPVRLELTHF--- 110 (337)
T ss_dssp ----------------TTEEEEEETTTCCEEEEEE-CCBTTEEEECTTCEEECTTSSE----EEEEEEEEEECSSCE---
T ss_pred ----------------CCeEEEEECCCCCeEeeEE-cCCcccccccccceEECCCCCE----EEEEecccccccccc---
Confidence 2679999999888654 32 111 014567899999997 777642110000000
Q ss_pred ecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeee
Q 005093 220 YNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 299 (715)
Q Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~ 299 (715)
......|+++|+ .+++.............+.|||||++|++.+ .+|+++|
T Consensus 111 ~~~~~~i~v~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-------------~~i~~~d 160 (337)
T 1pby_B 111 EVQPTRVALYDA-----------------ETLSRRKAFEAPRQITMLAWARDGSKLYGLG-------------RDLHVMD 160 (337)
T ss_dssp EECCCEEEEEET-----------------TTTEEEEEEECCSSCCCEEECTTSSCEEEES-------------SSEEEEE
T ss_pred cccCceEEEEEC-----------------CCCcEEEEEeCCCCcceeEECCCCCEEEEeC-------------CeEEEEE
Confidence 002357999997 5555443333334567789999999988772 1389999
Q ss_pred cCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee---------------------E
Q 005093 300 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ---------------------V 358 (715)
Q Consensus 300 ~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~---------------------~ 358 (715)
+.+++.... +.... ......|+|||+.+++.....+.. .
T Consensus 161 ~~~~~~~~~----------~~~~~----------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 161 PEAGTLVED----------KPIQS----------WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp TTTTEEEEE----------ECSTT----------TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred CCCCcEeee----------eeccc----------cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 877553211 00000 012346888888766544332221 6
Q ss_pred EEEEECCCCcEEEecCCC--CCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 359 IISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~~~--~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
|+.+|+.+++...+.... .......++++++.+++. -..|+++++.++
T Consensus 221 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~v~~~d~~~~ 270 (337)
T 1pby_B 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA------YNVLESFDLEKN 270 (337)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE------ESEEEEEETTTT
T ss_pred eEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe------CCeEEEEECCCC
Confidence 899999999876443221 122335788999888766 156888887544
No 267
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.25 E-value=1.2e-10 Score=120.09 Aligned_cols=226 Identities=12% Similarity=0.085 Sum_probs=137.5
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (715)
....|.++|+.++... ..+. ..+..+.+.+...+|||||++|+.....+ ...+| .+++...... +..+
T Consensus 101 ~dg~v~lWd~~~~~~~-~~~~-~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~---~h~~ 170 (344)
T 4gqb_B 101 DSGAVELWELDENETL-IVSK-FCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQVVLSSYR---AHAA 170 (344)
T ss_dssp TTSEEEEEEECTTSSC-EEEE-EEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS
T ss_pred CCCEEEEEeccCCCce-eEee-ccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CcCC
Confidence 4445667777665431 1111 11112336689999999999998765543 34556 3444333322 1112
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
. +..+.|+|+++.++..+.. ...|.+||+.+
T Consensus 171 ~------V~~~~~~~~~~~~l~s~s~-------------------------------------------D~~v~iwd~~~ 201 (344)
T 4gqb_B 171 Q------VTCVAASPHKDSVFLSCSE-------------------------------------------DNRILLWDTRC 201 (344)
T ss_dssp C------EEEEEECSSCTTEEEEEET-------------------------------------------TSCEEEEETTS
T ss_pred c------eEEEEecCCCCCceeeecc-------------------------------------------ccccccccccc
Confidence 2 2789999999877665432 25699999998
Q ss_pred CceEee-cCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 172 GEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 172 g~~~~l-~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
++.... ........+..+.|+|++.. ++.++. .+..|.++|+ ..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~p~~~~----~l~sg~--------------~dg~v~~wd~----------------~~~ 247 (344)
T 4gqb_B 202 PKPASQIGCSAPGYLPTSLAWHPQQSE----VFVFGD--------------ENGTVSLVDT----------------KST 247 (344)
T ss_dssp SSCEEECC----CCCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEES----------------CC-
T ss_pred cceeeeeecceeeccceeeeecCCCCc----ceEEec--------------cCCcEEEEEC----------------CCC
Confidence 875543 11122334668899998887 766653 2236788887 133
Q ss_pred CCceecCCCCccccceeEcCCCCe-EEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~-l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
.....+..+...+...+|||||.. |+-.+.+ ..|.++|+.+++...+..
T Consensus 248 ~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-----------~~i~vwd~~~~~~~~~~~------------------- 297 (344)
T 4gqb_B 248 SCVLSSAVHSQCVTGLVFSPHSVPFLASLSED-----------CSLAVLDSSLSELFRSQA------------------- 297 (344)
T ss_dssp -CCEEEECCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTCCEEEEECC-------------------
T ss_pred cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC-----------CeEEEEECCCCcEEEEcC-------------------
Confidence 445566777778899999999965 4444443 248888887754321110
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
+...+..++|+|+++.++.+...++...+|.++
T Consensus 298 -H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 298 -HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp -CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred -CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 122456778999998888877766655565443
No 268
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.25 E-value=2e-10 Score=122.06 Aligned_cols=265 Identities=12% Similarity=0.072 Sum_probs=150.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
+.+...+|||||++|+.....+ . ..+| ..++....... ... .+..+.|+|||+.|+....+....
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg----~-i~i~~~~~~~~~~~~~---~~~------~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENG----E-LRLWNKTGALLNVLNF---HRA------PIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTS----C-EEEEETTSCEEEEECC---CCS------CEEEEEECTTSSEEEEEETTCCEE
T ss_pred CceEEEEEcCCCCEEEEEeCCC----e-EEEEeCCCCeeeeccC---CCc------cEEEEEECCCCCEEEEEecCCeEE
Confidence 4689999999999999876542 2 3344 44444333321 111 237899999999998876543221
Q ss_pred CCCccCCCCCCCCCCcCCCC---------------CCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNS---------------WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSV 186 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~ 186 (715)
.|................ ....+.|.++ +..+.......|++||+.+++..... ......+
T Consensus 175 --iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~-~~~~~~i 250 (425)
T 1r5m_A 175 --LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKL-IGHHGPI 250 (425)
T ss_dssp --EEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEE-CCCSSCE
T ss_pred --EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeee-ccCCCce
Confidence 222111110000000000 0233445544 33334445578999999987654331 2334467
Q ss_pred ceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-CceecCCCCccccc
Q 005093 187 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFF 265 (715)
Q Consensus 187 ~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~ 265 (715)
..+.|+|+++. |+... .+..|.++|+ ..+ ....+......+..
T Consensus 251 ~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 251 SVLEFNDTNKL----LLSAS---------------DDGTLRIWHG-----------------GNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp EEEEEETTTTE----EEEEE---------------TTSCEEEECS-----------------SSBSCSEEECCCSSCEEE
T ss_pred EEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCccceEecCCCccEEE
Confidence 78999999986 66554 2236888887 433 34555556667889
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCC
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 345 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~ 345 (715)
..|+||| .|+..+.+ ..|+++|+.+++..... .. +...+..+.|+|+++
T Consensus 295 ~~~~~~~-~l~~~~~d-----------~~i~i~d~~~~~~~~~~----------~~---------~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMD-----------GSVRLWSLKQNTLLALS----------IV---------DGVPIFAGRISQDGQ 343 (425)
T ss_dssp EEEETTT-EEEEEETT-----------SEEEEEETTTTEEEEEE----------EC---------TTCCEEEEEECTTSS
T ss_pred EEECCCC-EEEEEeCC-----------CcEEEEECCCCcEeEec----------cc---------CCccEEEEEEcCCCC
Confidence 9999999 56555443 25888898765431110 00 011345667999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCc--------------------E-EEecCCCC--CceeEEEeecCCEEEEEE
Q 005093 346 TMLLSSIWGSSQVIISVNVSSGE--------------------L-LRITPAES--NFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 346 ~l~~~~~~~~~~~l~~~d~~tg~--------------------~-~~l~~~~~--~~~~~~~s~~~~~l~~~~ 395 (715)
.|+. ...++ .|..+|+.+++ . ..+..... .+....|++++..|+...
T Consensus 344 ~l~~-~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 344 KYAV-AFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEE-EETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EEEE-EECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 5554 44444 45555666655 3 33333322 345557777777665443
No 269
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.25 E-value=1.7e-09 Score=121.21 Aligned_cols=266 Identities=17% Similarity=0.104 Sum_probs=146.8
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEec--CCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.+.+...+|||||++||-....+ ...+|+ .++......+. ...+ .+..++|||||++|+..+....
T Consensus 59 ~~~v~~~~~spdg~~lasg~~d~-----~v~lWd~~~~~~~~~~~~~-~~~~------~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 59 SHQTTVAKTSPSGYYCASGDVHG-----NVRIWDTTQTTHILKTTIP-VFSG------PVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS-----EEEEEESSSTTCCEEEEEE-CSSS------CEEEEEECTTSCEEEEEECCSS
T ss_pred CCceEEEEECCCCcEEEEEeCCC-----CEEEeECCCCcceeeEeec-ccCC------ceEEEEECCCCCEEEEEECCCC
Confidence 36789999999999999776542 455662 33322222211 1111 2379999999999988765321
Q ss_pred C--CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 120 P--SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 120 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
. ....+. .................+.|.|+....+ .......|.+||..+++....- ......+..++|+|||+
T Consensus 127 ~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 127 RFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp CSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred ceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCCCC
Confidence 1 111121 1111111122223344556777632212 2334578999998877654331 23334678899999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecC-------CCCccccceeE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLT-------ESISSAFFPRF 268 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt-------~~~~~~~~~~~ 268 (715)
. |+..+ .+..|.++|+ .+++.. .+. .+...+...+|
T Consensus 204 ~----las~s---------------~D~~i~lwd~-----------------~~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 204 L----FASTG---------------GDGTIVLYNG-----------------VDGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred E----EEEEE---------------CCCcEEEEEC-----------------CCCcEeeeeccccccccccCCCEEEEEE
Confidence 7 66554 2235777776 444332 231 34556888999
Q ss_pred cCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-c---------------------ccceeeeeeceecCCCC-
Q 005093 269 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-S---------------------LEKIVDVIPVVQCAEGD- 325 (715)
Q Consensus 269 spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-l---------------------t~~~~~~~~~~~~~~~~- 325 (715)
||||++|+-.+.+. .|.++|+.+++... + +...+..+.++......
T Consensus 248 spdg~~l~s~s~D~-----------~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 248 SPDGTKIASASADK-----------TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp CTTSSEEEEEETTS-----------EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEE
T ss_pred CCCCCEEEEEeCCC-----------eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCc
Confidence 99999998776553 36677766543211 1 00001111222211100
Q ss_pred --CccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 326 --CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 326 --~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
.+. .+...+..++|+|||+.| ++...++ .+..+|+.+++...+.
T Consensus 317 ~~~~~-gh~~~v~~l~~spdg~~l-~s~s~D~--~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 317 DQVRY-GHNKAITALSSSADGKTL-FSADAEG--HINSWDISTGISNRVF 362 (611)
T ss_dssp EEEEC-CCSSCEEEEEECTTSSEE-EEEETTS--CEEEEETTTCCEEECS
T ss_pred ceEEc-CCCCCEEEEEEeCCCCEE-EEEeCCC--cEEEEECCCCceeeec
Confidence 001 122345567899999855 4554444 4556688888877664
No 270
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.25 E-value=2.7e-10 Score=118.56 Aligned_cols=130 Identities=12% Similarity=0.019 Sum_probs=79.3
Q ss_pred CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-----
Q 005093 183 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT----- 257 (715)
Q Consensus 183 ~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt----- 257 (715)
......++|||||+. +++... ....|.++++ .++..+.+.
T Consensus 210 ~~~~~~~~~spdg~~----l~v~~~--------------~~~~v~v~~~-----------------~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 210 GSGPRHLIFNSDGKF----AYLINE--------------IGGTVIAFRY-----------------ADGMLDEIQTVAAD 254 (361)
T ss_dssp TCCEEEEEECTTSSE----EEEEET--------------TTCEEEEEEE-----------------ETTEEEEEEEEESC
T ss_pred CCCCeEEEEcCCCCE----EEEEcC--------------CCCeEEEEEe-----------------cCCceEEeEEEecC
Confidence 344568899999996 655541 2236777776 444332221
Q ss_pred -CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC--CCCCCCcccceeeeeeceecCCCCCccccccCC
Q 005093 258 -ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 258 -~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~--~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
........++|||||++|+...... ...|.+++++ ++..+.+. .... + ..
T Consensus 255 ~~~~~~~~~i~~spdg~~l~v~~~~~---------~~~i~v~~~~~~~g~~~~~~--------~~~~---g-------~~ 307 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGKYLYASNRLK---------ADGVAIFKVDETNGTLTKVG--------YQLT---G-------IH 307 (361)
T ss_dssp SSCCCCEEEEEECTTSSEEEEEECSS---------SCEEEEEEECTTTCCEEEEE--------EEEC---S-------SC
T ss_pred CCCCCCcccEEECCCCCEEEEECCCC---------CCEEEEEEEcCCCCcEEEee--------EecC---C-------CC
Confidence 1112346789999999886555431 1235555554 33321111 0000 0 12
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 374 (715)
+..++|+|||+.|++.....+...+|.+|+++|+.+.+..
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 347 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK 347 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC
T ss_pred CceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce
Confidence 4567899999988877666777889999999999887753
No 271
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.24 E-value=3.4e-10 Score=125.96 Aligned_cols=222 Identities=19% Similarity=0.187 Sum_probs=141.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEe-cCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+...++||||+.|+.....+ ...+| ..++...... .... +..+.|+|||+.|+....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~~~~~~----------v~~~~~s~~g~~l~~~~~---- 364 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQHLQTLTGHSSS----------VWGVAFSPDGQTIASASD---- 364 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECCCSSC----------EEEEEECTTSSEEEEEET----
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCeeEEEeCCCCC----------EEEEEECCCCCEEEEEeC----
Confidence 5678899999999998775542 34556 3333222221 1122 268999999999987532
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...|.+|+.++.....+ ......+..++|+|||+.
T Consensus 365 ----------------------------------------dg~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~dg~~--- 399 (577)
T 2ymu_A 365 ----------------------------------------DKTVKLWNRNGQLLQTL--TGHSSSVRGVAFSPDGQT--- 399 (577)
T ss_dssp ----------------------------------------TSEEEEEETTCCEEEEE--ECCSSCEEEEEECTTSSC---
T ss_pred ----------------------------------------CCEEEEEcCCCCEEEEe--cCCCCCeEEEEECCCCCE---
Confidence 25588889766666666 334446778999999998
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+... .+..|.++|. .+.....+......+...+||||++.|+..+.
T Consensus 400 -l~~~~---------------~d~~v~~~~~-----------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 400 -IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp -EEEEE---------------TTSEEEEECT-----------------TCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred -EEEEe---------------CCCEEEEEeC-----------------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC
Confidence 87665 2235777775 45555666667777888999999999987765
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
+. .|.++|..+.....+.. +...+..++|+||++.| ++...++ .|.
T Consensus 447 d~-----------~v~~w~~~~~~~~~~~~--------------------~~~~v~~~~~spd~~~l-as~~~d~--~i~ 492 (577)
T 2ymu_A 447 DK-----------TVKLWNRNGQLLQTLTG--------------------HSSSVRGVAFSPDGQTI-ASASDDK--TVK 492 (577)
T ss_dssp TS-----------EEEEEETTSCEEEEEEC--------------------CSSCEEEEEECTTSCEE-EEEETTS--EEE
T ss_pred CC-----------EEEEEECCCCEEEEEcC--------------------CCCCEEEEEEcCCCCEE-EEEeCCC--EEE
Confidence 52 47777764422111111 11134567899999855 4444444 455
Q ss_pred EEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 361 SVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 361 ~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
.+|..+...+.+......+....|++++..|+...
T Consensus 493 iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 493 LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp EEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 55765455555555444455567888888665433
No 272
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.24 E-value=2.6e-10 Score=121.55 Aligned_cols=176 Identities=9% Similarity=0.046 Sum_probs=101.1
Q ss_pred CCCCCcccCCcCcccC-CccCceEEEEEccCCceEeecCCCCC-----CccceEEEecCCCCCccEEEEEeecCccceee
Q 005093 142 WKGQGDWEEDWGETYA-GKRQPSLFVININSGEVQAVKGIPKS-----LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLG 215 (715)
Q Consensus 142 ~~~~~~~~~~~g~~~~-~~~~~~l~~~~~~~g~~~~l~~~~~~-----~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g 215 (715)
++....|.|+ |..++ ......+.+|+.++ ....+ . .. ..+..++|||||+. |+..+
T Consensus 87 ~V~~vawSPd-G~~LAs~s~dg~V~iwd~~~-~l~~l--~-~~~~~~~~sv~svafSPDG~~----LAsgs--------- 148 (588)
T 2j04_A 87 YPRVCKPSPI-DDWMAVLSNNGNVSVFKDNK-MLTNL--D-SKGNLSSRTYHCFEWNPIESS----IVVGN--------- 148 (588)
T ss_dssp CEEEEEECSS-SSCEEEEETTSCEEEEETTE-EEEEC--C-CSSCSTTTCEEEEEECSSSSC----EEEEE---------
T ss_pred cEEEEEECCC-CCEEEEEeCCCcEEEEeCCc-eeeec--c-CCCccccccEEEEEEcCCCCE----EEEEc---------
Confidence 3444555555 33332 22336789999654 33333 2 22 24778999999998 77765
Q ss_pred eeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc--------eec----CCCCccccceeEcCCCCeEEEEecCCC
Q 005093 216 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--------VNL----TESISSAFFPRFSPDGKFLVFLSAKSS 283 (715)
Q Consensus 216 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l----t~~~~~~~~~~~spdg~~l~~~~~~~~ 283 (715)
.++.|-.+|+ .++.. ..+ ..+...+...+||||| |+-.+.+.
T Consensus 149 ------~DGtVkIWd~-----------------~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~- 202 (588)
T 2j04_A 149 ------EDGELQFFSI-----------------RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNN- 202 (588)
T ss_dssp ------TTSEEEEEEC-----------------CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTC-
T ss_pred ------CCCEEEEEEC-----------------CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCC-
Confidence 2336777776 44432 333 3334578999999999 55444432
Q ss_pred CCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 284 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 284 ~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
.++++++.++....+... +.+.+...+..++|+ |+.|+ ++. . ..+..+|
T Consensus 203 ----------tVrlWd~~~~~~~~~~~t---------------L~~~h~~~V~svaFs--g~~LA-Sa~-~--~tIkLWd 251 (588)
T 2j04_A 203 ----------SVFSMTVSASSHQPVSRM---------------IQNASRRKITDLKIV--DYKVV-LTC-P--GYVHKID 251 (588)
T ss_dssp ----------CEEEECCCSSSSCCCEEE---------------EECCCSSCCCCEEEE--TTEEE-EEC-S--SEEEEEE
T ss_pred ----------eEEEEECCCCccccceee---------------ecccccCcEEEEEEE--CCEEE-EEe-C--CeEEEEE
Confidence 488888877653210000 000011246778898 45444 443 2 4777789
Q ss_pred CCCCcEEEec-CCCCCceeEEE--eecCCEEE
Q 005093 364 VSSGELLRIT-PAESNFSWSLL--TLDGDNII 392 (715)
Q Consensus 364 ~~tg~~~~l~-~~~~~~~~~~~--s~~~~~l~ 392 (715)
+.+++...+. .....+....| ++++..++
T Consensus 252 ~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La 283 (588)
T 2j04_A 252 LKNYSISSLKTGSLENFHIIPLNHEKESTILL 283 (588)
T ss_dssp TTTTEEEEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred CCCCeEEEEEcCCCceEEEEEeeeCCCCCEEE
Confidence 8888885554 43344555677 77764443
No 273
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.23 E-value=3e-10 Score=118.05 Aligned_cols=229 Identities=10% Similarity=0.020 Sum_probs=133.9
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecC-ccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
+.+...+||||++.|+ .... +.-.+|.+ ..++........ .+.. ..+..+.|||||++|+..+.
T Consensus 95 ~~V~~~~~s~d~~~l~-~s~d--g~v~lWd~-~~~~~~~~~~~~~~~h~------~~V~~v~~spdg~~l~sgs~----- 159 (357)
T 4g56_B 95 AGVTDVAWVSEKGILV-ASDS--GAVELWEI-LEKESLLVNKFAKYEHD------DIVKTLSVFSDGTQAVSGGK----- 159 (357)
T ss_dssp SCEEEEEEETTTEEEE-EETT--SCEEEC---------CCCCEEECCCS------SCEEEEEECSSSSEEEEEET-----
T ss_pred CCEEEEEEcCCCCEEE-EECC--CEEEEeec-cccceeEEEeeccCCCC------CCEEEEEECCCCCEEEEEeC-----
Confidence 5588999999997654 3332 33223322 222221111110 1111 12378999999999877532
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
...|.+||+++++..... ......+..++|+|+++.
T Consensus 160 ---------------------------------------dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~s~~~~~---- 195 (357)
T 4g56_B 160 ---------------------------------------DFSVKVWDLSQKAVLKSY-NAHSSEVNCVAACPGKDT---- 195 (357)
T ss_dssp ---------------------------------------TSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTCSS----
T ss_pred ---------------------------------------CCeEEEEECCCCcEEEEE-cCCCCCEEEEEEccCCCc----
Confidence 256899999988765431 233446778899999987
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ec--CCCCccccceeEcCCCCeEEEE
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NL--TESISSAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--t~~~~~~~~~~~spdg~~l~~~ 278 (715)
++.++.. +..|.++|+ .+++.. .+ ......+...+|+|++..++.+
T Consensus 196 ~~~s~~~--------------dg~v~~wd~-----------------~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 196 IFLSCGE--------------DGRILLWDT-----------------RKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp CEEEEET--------------TSCEEECCT-----------------TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred eeeeecc--------------CCceEEEEC-----------------CCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 6555432 235777786 444332 22 2234457789999997665544
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
...+ ..|.++|+.+++....... +...+..++|+|++..++++...++.
T Consensus 245 g~~d----------~~i~~wd~~~~~~~~~~~~-------------------~~~~v~~l~~sp~~~~~lasgs~D~~-- 293 (357)
T 4g56_B 245 GDET----------GNVSLVNIKNPDSAQTSAV-------------------HSQNITGLAYSYHSSPFLASISEDCT-- 293 (357)
T ss_dssp EESS----------SCEEEEESSCGGGCEEECC-------------------CSSCEEEEEECSSSSCCEEEEETTSC--
T ss_pred eecc----------cceeEEECCCCcEeEEEec-------------------cceeEEEEEEcCCCCCEEEEEeCCCE--
Confidence 4332 2488889877543211100 11134567899998777777665554
Q ss_pred EEEEECCCCcEEEecCCCCCceeEEEee-cCCEEE
Q 005093 359 IISVNVSSGELLRITPAESNFSWSLLTL-DGDNII 392 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~~~~~~~~~~~s~-~~~~l~ 392 (715)
|..+|+.+++..+.......+....|+| ++..|+
T Consensus 294 i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 294 VAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEE
T ss_pred EEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEE
Confidence 5556888898877765555455567887 455443
No 274
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.23 E-value=2.7e-10 Score=117.55 Aligned_cols=269 Identities=12% Similarity=0.093 Sum_probs=153.2
Q ss_pred cccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 40 VEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 40 ~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
.+.+.+...+|||||+.|+-....+ ...+| ..++......... ..+..+.|+|||+.|+..+.+
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPLRS---------SWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECSS---------SCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCcceEeecCC---------ccEEEEEECCCCCEEEEEeCC
Confidence 3447789999999999998765543 45566 3333333322211 123689999999999876654
Q ss_pred CCCCCCCccCCCCCCCCC----CcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec
Q 005093 118 PSPSKPTFSLGSTKGGSS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp 193 (715)
.... .|.......... ............|.++ +..+.......|.+||+++++..... ......+..+.|+|
T Consensus 119 ~~v~--iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~ 194 (340)
T 1got_B 119 NICS--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAP 194 (340)
T ss_dssp CEEE--EEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECT
T ss_pred CeEE--EEECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECC
Confidence 3211 122111100000 0011111122233333 23333334578999999988765431 23334677899999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDG 272 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg 272 (715)
|++. ++..+ .+..|.++|+ .++. ...+......+....|+|||
T Consensus 195 ~~~~----l~sg~---------------~d~~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 195 DTRL----FVSGA---------------CDASAKLWDV-----------------REGMCRQTFTGHESDINAICFFPNG 238 (340)
T ss_dssp TSSE----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCCSSCEEEEEECTTS
T ss_pred CCCE----EEEEe---------------CCCcEEEEEC-----------------CCCeeEEEEcCCcCCEEEEEEcCCC
Confidence 9985 55443 2236778886 4443 44566667778899999999
Q ss_pred CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 273 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 273 ~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+.|+..+.+. .|.++|+.+++..... .... ....+..+.|+|+|+.+ ++..
T Consensus 239 ~~l~s~s~d~-----------~v~iwd~~~~~~~~~~------------~~~~-----~~~~v~~~~~s~~g~~l-~~g~ 289 (340)
T 1got_B 239 NAFATGSDDA-----------TCRLFDLRADQELMTY------------SHDN-----IICGITSVSFSKSGRLL-LAGY 289 (340)
T ss_dssp SEEEEEETTS-----------CEEEEETTTTEEEEEE------------CCTT-----CCSCEEEEEECTTSSEE-EEEE
T ss_pred CEEEEEcCCC-----------cEEEEECCCCcEEEEE------------ccCC-----cccceEEEEECCCCCEE-EEEC
Confidence 9888766553 4788888764321100 0000 00124466799999855 4444
Q ss_pred eCCeeEEEEEECCCCcEEEe-cCCCCCceeEEEeecCCEEEE
Q 005093 353 WGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 353 ~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~~~~~l~~ 393 (715)
.++ .+..+|+.+++.... ......+....|++++..|+.
T Consensus 290 ~d~--~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 290 DDF--NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp TTS--EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CCC--eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 444 566668777765543 333334444567777766553
No 275
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.23 E-value=7.4e-12 Score=136.47 Aligned_cols=133 Identities=23% Similarity=0.247 Sum_probs=93.6
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCC-CCCCCchhhhhcCCCCCC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYR-GSLGFGEEALQSLPGKVG 537 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~r-G~~~~g~~~~~~~~~~~~ 537 (715)
+.|.+.+ .+|.|......+++|+||++|||++..+...........++.|++|+.+||| |..++........ .+
T Consensus 95 ~edcl~l--nv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~---~~ 169 (542)
T 2h7c_A 95 SEDCLYL--NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHS---RG 169 (542)
T ss_dssp ESCCCEE--EEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTC---CC
T ss_pred CCCCcEE--EEEECCCCCCCCCCCEEEEECCCcccCCCccccCHHHHHhcCCEEEEecCCCCccccCCCCCcccC---cc
Confidence 3455555 5889986545578999999999887654432211122334589999999999 3323322211111 22
Q ss_pred ccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCcch
Q 005093 538 SQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCN 596 (715)
Q Consensus 538 ~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~~ 596 (715)
...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 170 n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 170 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 33478999999999875 24799999999999999999988875 3579999999998754
No 276
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.23 E-value=1e-09 Score=113.37 Aligned_cols=286 Identities=12% Similarity=0.142 Sum_probs=148.5
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
.+...+|||||+.||..... +.-.+|.+ .++..........+..+. +..++|||||++|+..+.+....
T Consensus 18 ~v~~l~~sp~g~~las~~~D--~~i~iw~~-~~~~~~~~~~~~~~h~~~------v~~~~~sp~g~~l~s~s~D~~v~-- 86 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD--RRIRIWGT-EGDSWICKSVLSEGHQRT------VRKVAWSPCGNYLASASFDATTC-- 86 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT--SCEEEEEE-ETTEEEEEEEECSSCSSC------EEEEEECTTSSEEEEEETTSCEE--
T ss_pred cEEEEEECCCCCEEEEEcCC--CeEEEEEc-CCCcceeeeeeccccCCc------EEEEEECCCCCEEEEEECCCcEE--
Confidence 57889999999999877554 22233332 233222222222222222 37899999999998876554322
Q ss_pred CccCCCCC--CCCCCcCCCCCCCCCcccCCcCcccCC-ccCceEEEEEccCCceE----eecCCCCCCccceEEEecCCC
Q 005093 124 TFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAG-KRQPSLFVININSGEVQ----AVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 124 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~g~~~----~l~~~~~~~~~~~~~~spdg~ 196 (715)
.|...... ..............+.|.|+ |..++. .....|.+||+.++... .+ ......+..+.|+|||+
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVL--NSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEE--CCCCSCEEEEEECSSSS
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEe--cCcCCCeEEEEECCCCC
Confidence 22211110 00001112233345567776 443332 33478999999876432 23 23334577899999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC---ceecCCCCccccceeEcCCCC
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDGK 273 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~lt~~~~~~~~~~~spdg~ 273 (715)
. |+..+. +..|.++|+ ..+. ...+..+...+...+|||||+
T Consensus 164 ~----l~s~s~---------------d~~i~~w~~-----------------~~~~~~~~~~~~~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 164 L----LASASY---------------DDTVKLYRE-----------------EEDDWVCCATLEGHESTVWSLAFDPSGQ 207 (345)
T ss_dssp C----EEEEET---------------TSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEECTTSS
T ss_pred E----EEEEeC---------------CCcEEEEEe-----------------cCCCEEEEEEecCCCCceEEEEECCCCC
Confidence 8 776652 124555554 2332 234556667788999999999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCC-CCCcc-cceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNG-NFSSL-EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~lt-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
+|+..+.+. .|.+++....+ ...+. ...+.....+. .+.+.+...+..++|++++..+ ++.
T Consensus 208 ~l~s~s~D~-----------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~h~~~v~~v~~~~~~~~l-~s~ 270 (345)
T 3fm0_A 208 RLASCSDDR-----------TVRIWRQYLPGNEQGVACSGSDPSWKCIC-----TLSGFHSRTIYDIAWCQLTGAL-ATA 270 (345)
T ss_dssp EEEEEETTS-----------CEEEEEEECTTCTTCCCCC---CEEEEEE-----EECSSCSSCEEEEEECTTTCCE-EEE
T ss_pred EEEEEeCCC-----------eEEEeccccCCCCccceeeccCCccceeE-----EecCCCCCcEEEEEEecCCCEE-EEE
Confidence 998777653 25555542211 11111 00000000000 0011122245567899999854 555
Q ss_pred eeCCeeEEEEEECCCCc----E---EEe-cCCCCCceeEEEeecCCEEEEEEe
Q 005093 352 IWGSSQVIISVNVSSGE----L---LRI-TPAESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 352 ~~~~~~~l~~~d~~tg~----~---~~l-~~~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
..++..++|.++..... . ..+ ......+....|+|++..++++.+
T Consensus 271 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 271 CGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp ETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred eCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 55666677766543211 0 011 112223444567777654444443
No 277
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.21 E-value=8e-10 Score=112.32 Aligned_cols=270 Identities=14% Similarity=0.166 Sum_probs=149.0
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.+.+...+|||||++||.....+ ...+| .+++....... ... .+..+.|+|||+.|+..+.+..
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~---h~~------~v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTISG---HKL------GISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECC---CSS------CEEEEEECTTSSEEEEEETTSE
T ss_pred CCcEEEEEECCCCCEEEEeeCCC-----eEEEEeCCCcccchhhcc---CCC------ceEEEEEcCCCCEEEEECCCCE
Confidence 36689999999999998775543 34455 34444443321 111 2378999999999988765432
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
.. .|......................|.++....+.......|.+||+.+++..... ......+..+.|+|||+.
T Consensus 89 i~--vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~-- 163 (312)
T 4ery_A 89 LK--IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSL-- 163 (312)
T ss_dssp EE--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE--
T ss_pred EE--EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCE--
Confidence 21 2222111111111111222233445555222222334578999999988754331 333446778999999986
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecC-CCCccccceeEcCCCCeEEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt-~~~~~~~~~~~spdg~~l~~ 277 (715)
++... .+..|.++|+ .+++. ..+. ..........|+|||++|+.
T Consensus 164 --l~~~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 209 (312)
T 4ery_A 164 --IVSSS---------------YDGLCRIWDT-----------------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 209 (312)
T ss_dssp --EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCSSCCCEEEEEECTTSSEEEE
T ss_pred --EEEEe---------------CCCcEEEEEC-----------------CCCceeeEEeccCCCceEEEEECCCCCEEEE
Confidence 66554 2236888887 44433 3333 23345677899999999887
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc-cCCCEEEEEeeeCCe
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGSS 356 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~dg~~l~~~~~~~~~ 356 (715)
.+.+. .|.++|+.+++...... ...... ......++ ++++ ++++...++
T Consensus 210 ~~~d~-----------~i~iwd~~~~~~~~~~~----------~~~~~~-------~~~~~~~~~~~~~-~l~sg~~dg- 259 (312)
T 4ery_A 210 ATLDN-----------TLKLWDYSKGKCLKTYT----------GHKNEK-------YCIFANFSVTGGK-WIVSGSEDN- 259 (312)
T ss_dssp EETTT-----------EEEEEETTTTEEEEEEC----------SSCCSS-------SCCCEEEECSSSC-EEEECCTTS-
T ss_pred EcCCC-----------eEEEEECCCCcEEEEEE----------ecCCce-------EEEEEEEEeCCCc-EEEEECCCC-
Confidence 66542 48888887654311100 000000 00112233 4554 555555444
Q ss_pred eEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEE
Q 005093 357 QVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 357 ~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~ 395 (715)
.|..+|+.+++...... ....+....+++++..++...
T Consensus 260 -~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 260 -LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp -CEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred -EEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 56667888887665443 333334456777777665444
No 278
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.21 E-value=7.8e-11 Score=123.38 Aligned_cols=233 Identities=9% Similarity=0.056 Sum_probs=130.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
+.+...+|||||++||..... +.-.+|.+.. +....+..+. +..+ .+..+.|+|||++|+..+.+
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d--~~i~iw~~~~-~~~~~~~~~~-~h~~------~v~~~~~s~~~~~l~s~s~d----- 76 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTAT--NQVELYEQDG-NGWKHARTFS-DHDK------IVTCVDWAPKSNRIVTCSQD----- 76 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSS--SCBCEEEEET-TEEEECCCBC-CCSS------CEEEEEECTTTCCEEEEETT-----
T ss_pred CcEEEEEECCCCCEEEEecCC--CEEEEEEccC-CceEEEEEEe-cCCc------eEEEEEEeCCCCEEEEEeCC-----
Confidence 457888999999988865433 3344444432 2112221111 1111 23789999999988876432
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc----eEeecCCCCCCccceEEEecCCCCC
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~----~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
..|.+||+++++ ...+ ......+..+.|+|||+.
T Consensus 77 ---------------------------------------~~v~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~- 114 (377)
T 3dwl_C 77 ---------------------------------------RNAYVYEKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDK- 114 (377)
T ss_dssp ---------------------------------------SSEEEC------CCCCEEEC--CCCSSCEEEEECCTTSSC-
T ss_pred ---------------------------------------CeEEEEEcCCCCceeeeeEe--cccCCceEEEEECCCCCE-
Confidence 558999998876 3333 334456788999999998
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC----ceecCC-CCccccceeEcCCCC
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNLTE-SISSAFFPRFSPDGK 273 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~lt~-~~~~~~~~~~spdg~ 273 (715)
|+... .+..|.++|+ .+++ ...+.. ....+..++|+|||+
T Consensus 115 ---l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 115 ---FAVGS---------------GARVISVCYF-----------------EQENDWWVSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp ---CEEEE---------------SSSCEEECCC----------------------CCCCEEECSSCCSCEEEEEECTTSS
T ss_pred ---EEEEe---------------cCCeEEEEEE-----------------CCcccceeeeEeecccCCCeEEEEEcCCCC
Confidence 77765 2235777776 3333 455655 566789999999999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCCccc--------ceeeeeeceecCCCCCccccccCCCCCCccccCCC
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE--------KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 345 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~ 345 (715)
.|+..+.+. .|.++|+..++...... ......... . +...+..+.|+|||+
T Consensus 160 ~l~~~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 160 LLAAGCADR-----------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--P--------SGGWVHAVGFSPSGN 218 (377)
T ss_dssp EEEEEESSS-----------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--C--------CSSSEEEEEECTTSS
T ss_pred EEEEEeCCC-----------EEEEEEEEecccCCCccccccccccchhhhhhcc--c--------CCceEEEEEECCCCC
Confidence 888777653 37777775433211000 001111110 0 112355678999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcE-----EEecCCCCCceeEEEeecCCEE
Q 005093 346 TMLLSSIWGSSQVIISVNVSSGEL-----LRITPAESNFSWSLLTLDGDNI 391 (715)
Q Consensus 346 ~l~~~~~~~~~~~l~~~d~~tg~~-----~~l~~~~~~~~~~~~s~~~~~l 391 (715)
.|+. ...++ .|..+|+.+++. ..+......+....|++++..|
T Consensus 219 ~l~~-~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 266 (377)
T 3dwl_C 219 ALAY-AGHDS--SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV 266 (377)
T ss_dssp CEEE-EETTT--EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEE
T ss_pred EEEE-EeCCC--cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEE
Confidence 5544 44444 455556666654 2333333334556788887544
No 279
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.21 E-value=4.1e-10 Score=126.18 Aligned_cols=226 Identities=15% Similarity=0.083 Sum_probs=138.2
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEE-ecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
.+.....+|||||++||+.... . ..+| .+++..... ..... +..++|||||++||-.+.
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~~-----~-v~l~~~~~~~~~~~~~~h~~~----------v~~~~~spdg~~lasg~~-- 79 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNGT-----S-VYTVPVGSLTDTEIYTEHSHQ----------TTVAKTSPSGYYCASGDV-- 79 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEETT-----E-EEEEETTCSSCCEEECCCSSC----------EEEEEECTTSSEEEEEET--
T ss_pred cCceeEEeeCCCCCEEEeCCCC-----E-EEEecCCCcccCeEecCCCCc----------eEEEEECCCCcEEEEEeC--
Confidence 3667788999999999987532 2 3345 334433333 22222 278999999999987543
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE---eecCCCCCCccceEEEecCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~---~l~~~~~~~~~~~~~~spdg 195 (715)
...|.+||+++++.. .+ ......+..++|||||
T Consensus 80 ------------------------------------------d~~v~lWd~~~~~~~~~~~~--~~~~~~v~~v~fs~dg 115 (611)
T 1nr0_A 80 ------------------------------------------HGNVRIWDTTQTTHILKTTI--PVFSGPVKDISWDSES 115 (611)
T ss_dssp ------------------------------------------TSEEEEEESSSTTCCEEEEE--ECSSSCEEEEEECTTS
T ss_pred ------------------------------------------CCCEEEeECCCCcceeeEee--cccCCceEEEEECCCC
Confidence 256999999765422 23 1223467889999999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCe-
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF- 274 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~- 274 (715)
+. |+..+...+ +...|+.+|. +.....+..+...+..+.|+||++.
T Consensus 116 ~~----l~~~~~~~~-----------~~~~v~~wd~------------------~~~~~~l~gh~~~v~~v~f~p~~~~~ 162 (611)
T 1nr0_A 116 KR----IAAVGEGRE-----------RFGHVFLFDT------------------GTSNGNLTGQARAMNSVDFKPSRPFR 162 (611)
T ss_dssp CE----EEEEECCSS-----------CSEEEEETTT------------------CCBCBCCCCCSSCEEEEEECSSSSCE
T ss_pred CE----EEEEECCCC-----------ceeEEEEeeC------------------CCCcceecCCCCCceEEEECCCCCeE
Confidence 98 876653211 1135666663 3344456667778899999999985
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
|+..+.+. .+.++|..+++.... +.+ +...+..++|+|||+. +++...+
T Consensus 163 l~s~s~D~-----------~v~lwd~~~~~~~~~------------------l~~-H~~~V~~v~fspdg~~-las~s~D 211 (611)
T 1nr0_A 163 IISGSDDN-----------TVAIFEGPPFKFKST------------------FGE-HTKFVHSVRYNPDGSL-FASTGGD 211 (611)
T ss_dssp EEEEETTS-----------CEEEEETTTBEEEEE------------------ECC-CSSCEEEEEECTTSSE-EEEEETT
T ss_pred EEEEeCCC-----------eEEEEECCCCeEeee------------------ecc-ccCceEEEEECCCCCE-EEEEECC
Confidence 55444442 367777655322100 000 1123456789999984 4555555
Q ss_pred CeeEEEEEECCCCcEEEecC--------CCCCceeEEEeecCCEEEEEE
Q 005093 355 SSQVIISVNVSSGELLRITP--------AESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~~~l~~--------~~~~~~~~~~s~~~~~l~~~~ 395 (715)
+ .+..+|+.+++...... ....+....|++++..|+...
T Consensus 212 ~--~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 212 G--TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp S--CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred C--cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 5 45556777777655442 223344467888888775443
No 280
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.18 E-value=1.2e-08 Score=106.79 Aligned_cols=246 Identities=10% Similarity=0.045 Sum_probs=146.1
Q ss_pred cccceEEeeCC-CCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 42 MTGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.+.+...+||| +++.|+.....+ ...+| ..+............. ..+..+.|+|||+.|+....
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~--- 183 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSGSVIQVFAKTDSWD------YWYCCVDVSVSRQMLATGDS--- 183 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTSCEEEEEECCCCSS------CCEEEEEEETTTTEEEEEET---
T ss_pred CCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCCCceEEEeccCCCC------CCeEEEEECCCCCEEEEECC---
Confidence 36789999999 667776654432 34556 3333333332222211 12379999999998877532
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
...|++||+++.....+ ......+..++|+|+++.
T Consensus 184 -----------------------------------------d~~i~i~d~~~~~~~~~--~~h~~~v~~~~~~~~~~~-- 218 (383)
T 3ei3_B 184 -----------------------------------------TGRLLLLGLDGHEIFKE--KLHKAKVTHAEFNPRCDW-- 218 (383)
T ss_dssp -----------------------------------------TSEEEEEETTSCEEEEE--ECSSSCEEEEEECSSCTT--
T ss_pred -----------------------------------------CCCEEEEECCCCEEEEe--ccCCCcEEEEEECCCCCC--
Confidence 26799999976666666 334456788999999997
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC----CCceecCCCCccccceeEcC-CCCe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED----LPVVNLTESISSAFFPRFSP-DGKF 274 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lt~~~~~~~~~~~sp-dg~~ 274 (715)
+++++. .+..|.++|+ .. +...........+..+.|+| ||+.
T Consensus 219 --~l~s~~--------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 219 --LMATSS--------------VDATVKLWDL-----------------RNIKDKNSYIAEMPHEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp --EEEEEE--------------TTSEEEEEEG-----------------GGCCSTTCEEEEEECSSCEEEEEECTTTSCE
T ss_pred --EEEEEe--------------CCCEEEEEeC-----------------CCCCcccceEEEecCCCceEEEEEcCCCCCE
Confidence 666653 2236888887 32 33333335566788999999 9999
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
|+..+.+. .|.++|+.++.... +...... .+ .+. ..-...|+|++..+.+....
T Consensus 266 l~~~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~-----------~~--~~~-~~~~~~~~p~~~~~~~~~s~ 320 (383)
T 3ei3_B 266 LLTTDQRN-----------EIRVYSSYDWSKPDQIIIHPHR-----------QF--QHL-TPIKATWHPMYDLIVAGRYP 320 (383)
T ss_dssp EEEEESSS-----------EEEEEETTBTTSCSEEEECCBC-----------CC--TTS-CCCCCEECSSSSEEEEECBC
T ss_pred EEEEcCCC-----------cEEEEECCCCcccccccccccc-----------cc--ccc-cceEEeccCCCCceEEEecC
Confidence 88776542 48889987755421 1100000 00 000 11224566666655443321
Q ss_pred ------CCeeEEEEEECCCCcEEEecCC---CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 354 ------GSSQVIISVNVSSGELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 354 ------~~~~~l~~~d~~tg~~~~l~~~---~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
.....|..+|+.+++....... ........|++++..|+.. + + ..|.+.++
T Consensus 321 dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s--d--~~i~iw~~ 380 (383)
T 3ei3_B 321 DDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M--G--FNILIWNR 380 (383)
T ss_dssp CTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E--T--TEEEEEEC
T ss_pred CcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c--C--CcEEEEec
Confidence 1235677789888886554432 2334445788988866544 3 2 34655554
No 281
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.17 E-value=1.7e-09 Score=111.54 Aligned_cols=142 Identities=9% Similarity=0.025 Sum_probs=76.9
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCcccc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 90 (715)
......|+++|+.+... .+....+ .......++|||||+++++... ....++.++ .+++....+.......
T Consensus 17 ~~~~~~v~~~d~~~~~~--~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 17 TNYPNNLHVVDVASDTV--YKSCVMP---DKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp EETTTEEEEEETTTTEE--EEEEECS---SCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred eCCCCeEEEEECCCCcE--EEEEecC---CCCCCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCcEEEEEEcccccc
Confidence 34456788877655421 2111111 0114678899999987766643 233577666 5566555554422100
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc
Q 005093 91 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 170 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 170 (715)
.. ......+.|||||++|++.......... .| +. ....|++||++
T Consensus 89 ~~---~~~~~~~~~spdg~~l~~~~~~~~~~~~-----------------------~~----~~-----~~~~i~~~d~~ 133 (349)
T 1jmx_B 89 EV---GRSMYSFAISPDGKEVYATVNPTQRLND-----------------------HY----VV-----KPPRLEVFSTA 133 (349)
T ss_dssp EE---EECSSCEEECTTSSEEEEEEEEEEECSS-----------------------CE----EE-----CCCEEEEEEGG
T ss_pred cc---cccccceEECCCCCEEEEEccccccccc-----------------------cc----cc-----CCCeEEEEECC
Confidence 00 0012689999999999887643110000 00 00 13689999999
Q ss_pred CCceEeec-CCCCCCccceEEEecCCC
Q 005093 171 SGEVQAVK-GIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 171 ~g~~~~l~-~~~~~~~~~~~~~spdg~ 196 (715)
+++..... .......+..++|+|||+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 134 DGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp GGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred CccccceeeeccCCCcccceeECCCCc
Confidence 86543221 011222456778999997
No 282
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.4e-09 Score=115.26 Aligned_cols=272 Identities=7% Similarity=0.066 Sum_probs=149.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCC---ccEEEEecCcccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQS---QLEKEFHVPQTVH 90 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~ 90 (715)
...|+++++.+..... .+.. + .....+...+|||||++|+.....+ ...+| ... ....+..+. ...
T Consensus 44 d~~v~iw~~~~~~~~~-~~~~--~-~~~~~v~~~~~s~~~~~l~~~~~dg-----~v~vw~~~~~~~~~~~~~~~~-~h~ 113 (416)
T 2pm9_A 44 DSSLELWSLLAADSEK-PIAS--L-QVDSKFNDLDWSHNNKIIAGALDNG-----SLELYSTNEANNAINSMARFS-NHS 113 (416)
T ss_dssp CCCCEEEESSSGGGCS-CSCC--C-CCSSCEEEEEECSSSSCEEEEESSS-----CEEEECCSSTTSCCCEEEECC-CSS
T ss_pred CCeEEEEEccCCCCCc-EEEE--E-ecCCceEEEEECCCCCeEEEEccCC-----eEEEeecccccccccchhhcc-CCc
Confidence 3456666676554210 1110 1 1225689999999999998876542 23344 111 111222221 111
Q ss_pred ccccCCCcccceeecCC-CCeEEEEeecCCCCCCCccCCCCC------CC---CCCcCCCCCCCCCcccCCcCcccC-Cc
Q 005093 91 GSVYADGWFEGISWNSD-ETLIAYVAEEPSPSKPTFSLGSTK------GG---SSDKDCNSWKGQGDWEEDWGETYA-GK 159 (715)
Q Consensus 91 ~~~~~~~~~~~~~wSpD-g~~la~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~g~~~~-~~ 159 (715)
+ .+..+.|+|| ++.|+..+.+... ..|...... .. ............+.|.++.+..+. ..
T Consensus 114 ~------~v~~~~~~~~~~~~l~s~~~dg~v--~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 114 S------SVKTVKFNAKQDNVLASGGNNGEI--FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp S------CCCEEEECSSSTTBEEEECSSSCE--EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred c------ceEEEEEcCCCCCEEEEEcCCCeE--EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 1 2379999999 6766665544322 223322221 00 001122333445667766333332 23
Q ss_pred cCceEEEEEccCCceEeecCCCC-----CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccc
Q 005093 160 RQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 234 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~-----~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 234 (715)
....|.+||+.+++......... ...+..+.|+|+|.. +++++..++ ....|.++|+
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~~~d~-----------~~~~i~~~d~--- 247 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST----RVATATGSD-----------NDPSILIWDL--- 247 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT----EEEEEECCS-----------SSCCCCEEET---
T ss_pred CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC----EEEEEECCC-----------CCceEEEEeC---
Confidence 45789999999887654321111 456788999999987 776653221 1125777886
Q ss_pred cchhhhhhhhccCCCCC--CceecC-CCCccccceeEcC-CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccc
Q 005093 235 KSEASELELKESSSEDL--PVVNLT-ESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 310 (715)
Q Consensus 235 ~~~~~~~~~~~~~~~~~--~~~~lt-~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~ 310 (715)
.++ ....+. .....+..+.|+| |++.|+..+.+. .|.++|+.+++.....
T Consensus 248 --------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----------~v~~wd~~~~~~~~~~- 301 (416)
T 2pm9_A 248 --------------RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----------TVLLWNPESAEQLSQF- 301 (416)
T ss_dssp --------------TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----------EEEEECSSSCCEEEEE-
T ss_pred --------------CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----------CEEEeeCCCCccceee-
Confidence 332 333444 4566788999999 888887666542 4888888775431100
Q ss_pred ceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 311 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
. .+...+..+.|+||+..++++...++...| +|+.++.
T Consensus 302 ---------~---------~~~~~v~~~~~s~~~~~~l~s~~~d~~i~i--w~~~~~~ 339 (416)
T 2pm9_A 302 ---------P---------ARGNWCFKTKFAPEAPDLFACASFDNKIEV--QTLQNLT 339 (416)
T ss_dssp ---------E---------CSSSCCCCEEECTTCTTEEEECCSSSEEEE--EESCCCC
T ss_pred ---------c---------CCCCceEEEEECCCCCCEEEEEecCCcEEE--EEccCCC
Confidence 0 011245678899999446666665554444 5655544
No 283
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.16 E-value=6.1e-09 Score=108.42 Aligned_cols=234 Identities=9% Similarity=0.065 Sum_probs=133.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+...+|||||+.||.....+ . ..+| .+++...+..+. ...+ .+..+.|+|||+.|+..+.
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~----~-v~i~~~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~l~~~~~---- 72 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNH----E-VHIYEKSGNKWVQVHELK-EHNG------QVTGVDWAPDSNRIVTCGT---- 72 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSS----E-EEEEEEETTEEEEEEEEE-CCSS------CEEEEEEETTTTEEEEEET----
T ss_pred CCeEEEEECCCCCEEEEEeCCC----E-EEEEeCCCCcEEeeeeec-CCCC------cccEEEEeCCCCEEEEEcC----
Confidence 5688999999999998774432 2 3344 344321222221 1111 2379999999998887532
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~~~ 199 (715)
...|.+||+++++..... -......+..+.|+|||+.
T Consensus 73 ----------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 110 (372)
T 1k8k_C 73 ----------------------------------------DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK-- 110 (372)
T ss_dssp ----------------------------------------TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE--
T ss_pred ----------------------------------------CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE--
Confidence 256999999888743321 0233446778999999987
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC----ceec-CCCCccccceeEcCCCCe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNL-TESISSAFFPRFSPDGKF 274 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l-t~~~~~~~~~~~spdg~~ 274 (715)
|+... .+..|.++|+ ..+. ...+ ......+....|+|||+.
T Consensus 111 --l~~~~---------------~d~~v~i~d~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 111 --FAVGS---------------GSRVISICYF-----------------EQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp --EEEEE---------------TTSSEEEEEE-----------------ETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------CCCEEEEEEe-----------------cCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 66654 1224556565 2222 2233 333556888999999998
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCCccc--------ceeeeeeceecCCCCCccccccCCCCCCccccCCCE
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE--------KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 346 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~ 346 (715)
|+..+.+. .|+++|+.......-.. ........+ . .+...+..+.|+|+++.
T Consensus 157 l~~~~~dg-----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 157 LAAGSCDF-----------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES--------S-SSCGWVHGVCFSANGSR 216 (372)
T ss_dssp EEEEETTS-----------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC--------C-CCSSCEEEEEECSSSSE
T ss_pred EEEEcCCC-----------CEEEEEcccccccccccccccccccchhhheEec--------C-CCCCeEEEEEECCCCCE
Confidence 88766542 37777764322110000 000000000 0 01123456789999985
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEEec-CCCCCceeEEEeecCCEE
Q 005093 347 MLLSSIWGSSQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNI 391 (715)
Q Consensus 347 l~~~~~~~~~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~~~~~l 391 (715)
|+. ...++ .|..+|+.+++..... .....+....|++++..+
T Consensus 217 l~~-~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 217 VAW-VSHDS--TVCLADADKKMAVATLASETLPLLAVTFITESSLV 259 (372)
T ss_dssp EEE-EETTT--EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEE
T ss_pred EEE-EeCCC--EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEE
Confidence 554 44344 5667788777755443 333344556788876533
No 284
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.16 E-value=2.3e-09 Score=111.66 Aligned_cols=190 Identities=11% Similarity=0.016 Sum_probs=116.9
Q ss_pred cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEee
Q 005093 98 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 177 (715)
Q Consensus 98 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l 177 (715)
++..++|||||++|+..+.. ....|.+||+++++....
T Consensus 135 ~~~~v~fSpDg~~la~as~~------------------------------------------~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSK------------------------------------------VPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CEEEEEECTTSSCEEEEESC------------------------------------------SSCEEEEEETTTTEEEEE
T ss_pred CEEEEEEcCCCCEEEEEECC------------------------------------------CCCEEEEeECCCCcEEEE
Confidence 34678999999999886432 126799999999886654
Q ss_pred cCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eec
Q 005093 178 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL 256 (715)
Q Consensus 178 ~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l 256 (715)
......+..++|||||+. |+..+. ..+.+++. .++.. ...
T Consensus 173 --~~~~~~V~~v~fspdg~~----l~s~s~----------------~~~~~~~~-----------------~~~~~~~~~ 213 (365)
T 4h5i_A 173 --IETRGEVKDLHFSTDGKV----VAYITG----------------SSLEVIST-----------------VTGSCIARK 213 (365)
T ss_dssp --EECSSCCCEEEECTTSSE----EEEECS----------------SCEEEEET-----------------TTCCEEEEE
T ss_pred --eCCCCceEEEEEccCCce----EEeccc----------------eeEEEEEe-----------------ccCcceeee
Confidence 233445789999999997 776541 14556664 33332 222
Q ss_pred --CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCC
Q 005093 257 --TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 257 --t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
......+...+|||||+.++..+.+.. ....++.+++.......+.. ..+ .. +...
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~-------~~~~i~~~~~~~~~~~~~~~-----~~~--~~--------~~~~ 271 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKG-------KGIVLTKISIKSGNTSVLRS-----KQV--TN--------RFKG 271 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSS-------CCEEEEEEEEETTEEEEEEE-----EEE--ES--------SCSC
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCc-------ceeEEeecccccceecceee-----eee--cC--------CCCC
Confidence 223445788999999999988876642 22346666655433211100 000 00 1113
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecC-CCCCceeEEEeecCCEEEE
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR-ITP-AESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~-~~~~~~~~~~s~~~~~l~~ 393 (715)
+..++|+|||+.| ++...++ .+..+|+.+++... +.. ....+....|+||+..|+-
T Consensus 272 V~~~~~Spdg~~l-asgs~D~--~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 272 ITSMDVDMKGELA-VLASNDN--SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEEEECTTSCEE-EEEETTS--CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred eEeEEECCCCCce-EEEcCCC--EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 4567899999855 4444444 45566888888654 333 3344555789999887653
No 285
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.16 E-value=3.7e-08 Score=102.37 Aligned_cols=260 Identities=10% Similarity=0.021 Sum_probs=143.6
Q ss_pred eEEeeCCCCceEEEEecC------CCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 46 SAVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
..+++||||++|++.... +.....+..++ .+.+....+.+....+ .-.......+.|||||++|++.....
T Consensus 69 p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~--~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 69 PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR--FDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc--cccCCCccceEECCCCCEEEEEecCC
Confidence 388999999999776531 11223455666 4445444444331100 00001125899999999998864321
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEee-cCCCCCCccceEEEecCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l-~~~~~~~~~~~~~~spdg~~ 197 (715)
...|.++| +++++... ...+. .+.+.|++++
T Consensus 147 ------------------------------------------~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~ 178 (373)
T 2mad_H 147 ------------------------------------------GPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPS 178 (373)
T ss_pred ------------------------------------------CCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCc
Confidence 26699999 99876533 21211 2456788876
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ec------CCCCccccceeEcC
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NL------TESISSAFFPRFSP 270 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l------t~~~~~~~~~~~sp 270 (715)
.++.... ...+..+|+ ++... .. .........+.+++
T Consensus 179 ----~~~~~~~--------------dg~~~~vd~------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 179 ----TFYLLCA--------------QGGLAKTDH------------------AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred ----eEEEEcC--------------CCCEEEEEC------------------CCcEEEEEeccccccCCcceeecceeEe
Confidence 5544321 224556652 11111 11 11111234478899
Q ss_pred CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc-CCCCCCccccCCCEEEE
Q 005093 271 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS-SSILSNPWLSDGCTMLL 349 (715)
Q Consensus 271 dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~dg~~l~~ 349 (715)
++..++|.+.. .+++++|+.++..+.+. . .. +.... ....+ |. .+...+.+++|++.+|+
T Consensus 223 ~~~~~~~~~~~-----------~~v~vid~~~~~~~v~~-~-~~---~~~~~--~~~~~-~~p~g~~~~~~s~d~~~lyV 283 (373)
T 2mad_H 223 KSGRIVWPVYS-----------GKILQADISAAGATNKA-P-ID---ALSGG--RKADT-WRPGGWQQVAYLKSSDGIYL 283 (373)
T ss_pred cCCEEEEEcCC-----------ceEEEEeccCCcceEee-e-ee---ecCCc--ccccc-eecCceEeEEECCCCCEEEE
Confidence 99988888743 25999998765432211 0 00 00000 00000 10 11223567899998888
Q ss_pred EeeeC-------CeeEEEEEECCCCcE-EEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 350 SSIWG-------SSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 350 ~~~~~-------~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
..... ....|+.+|++++++ ..|..+. ......+++|++.++++.... ...|.++|..+.+
T Consensus 284 ~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~~ 352 (373)
T 2mad_H 284 LTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAG--TEVLHIYDAGAGD 352 (373)
T ss_pred EeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCC--CCeEEEEECCCCC
Confidence 65432 235799999999887 4554333 234568999999666654322 2468888976553
No 286
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.16 E-value=1.7e-11 Score=133.48 Aligned_cols=134 Identities=18% Similarity=0.186 Sum_probs=90.8
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-ch--HHHH-HHH-hCCcEEEEEcCCCCCCCchhhhhcC-
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FLS-SVGYSLLIVNYRGSLGFGEEALQSL- 532 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~-~~--~~~~-~la-~~G~~vi~~d~rG~~~~g~~~~~~~- 532 (715)
+.|.+.+ .+|.|......++.|+||++|||++..+... +. .++. .++ ..|++|+.+|||... +|--.....
T Consensus 102 sedcl~l--~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~gf~~~~~~~ 178 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAIT 178 (544)
T ss_dssp CSCCCEE--EEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHH
T ss_pred CCCCeEE--EEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-ccCCCccccc
Confidence 3455555 5888976545578999999999988765432 21 1222 222 358999999999743 111000000
Q ss_pred CCCCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhC--------CCceeEEEecCCcc
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLC 595 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~~ 595 (715)
....+...+.|+.++++|+.++. ..|+++|.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 179 ~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 179 AEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 00123334889999999998862 47999999999999999998777642 45899999999853
No 287
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.15 E-value=4.8e-09 Score=110.51 Aligned_cols=212 Identities=15% Similarity=0.102 Sum_probs=121.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCcccc---c------cccCCCcccceeecCCCCeEEE
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVH---G------SVYADGWFEGISWNSDETLIAY 113 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~wSpDg~~la~ 113 (715)
+.+...+|||||++||...+ +..++|.+ .+|+....+....... . ..-.+..+..+.|||||++|+.
T Consensus 65 ~~V~~v~fspdg~~la~g~~---~~v~i~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCN---KTTQVYRV-SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp SCCCEEEECTTSSEEEEECB---SCEEEEET-TTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CEEEEEEECCCCCEEEEEcC---CcEEEEEe-cCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 56788999999999987543 22222222 3443333221110000 0 0001113478999999999887
Q ss_pred EeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec
Q 005093 114 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp 193 (715)
.+. ...|.+||+++++..... ......+..+.|+|
T Consensus 141 ~~~--------------------------------------------d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~p 175 (393)
T 1erj_A 141 GAE--------------------------------------------DRLIRIWDIENRKIVMIL-QGHEQDIYSLDYFP 175 (393)
T ss_dssp EET--------------------------------------------TSCEEEEETTTTEEEEEE-CCCSSCEEEEEECT
T ss_pred EcC--------------------------------------------CCeEEEEECCCCcEEEEE-ccCCCCEEEEEEcC
Confidence 533 256999999988765431 23344677899999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcC-CC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP-DG 272 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~sp-dg 272 (715)
||+. |+..+ .+..|.++|+ .+++...............|+| ||
T Consensus 176 ~~~~----l~s~s---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 176 SGDK----LVSGS---------------GDRTVRIWDL-----------------RTGQCSLTLSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp TSSE----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECSSCEEEEEECSTTC
T ss_pred CCCE----EEEec---------------CCCcEEEEEC-----------------CCCeeEEEEEcCCCcEEEEEECCCC
Confidence 9997 76554 2236778887 5555443333444577889999 88
Q ss_pred CeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 273 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 273 ~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
+.|+..+.+. .|.++|+.++.... +.... .... .+...+..+.|+|||+.| ++.
T Consensus 220 ~~l~~~s~d~-----------~v~iwd~~~~~~~~~~~~~~------------~~~~-~h~~~v~~v~~~~~g~~l-~s~ 274 (393)
T 1erj_A 220 KYIAAGSLDR-----------AVRVWDSETGFLVERLDSEN------------ESGT-GHKDSVYSVVFTRDGQSV-VSG 274 (393)
T ss_dssp CEEEEEETTS-----------CEEEEETTTCCEEEEEC------------------C-CCSSCEEEEEECTTSSEE-EEE
T ss_pred CEEEEEcCCC-----------cEEEEECCCCcEEEeecccc------------cCCC-CCCCCEEEEEECCCCCEE-EEE
Confidence 8887766553 37788877654311 10000 0000 012234567899999855 555
Q ss_pred eeCCeeEEEEEECCC
Q 005093 352 IWGSSQVIISVNVSS 366 (715)
Q Consensus 352 ~~~~~~~l~~~d~~t 366 (715)
..++...|| |+.+
T Consensus 275 s~d~~v~~w--d~~~ 287 (393)
T 1erj_A 275 SLDRSVKLW--NLQN 287 (393)
T ss_dssp ETTSEEEEE--EC--
T ss_pred eCCCEEEEE--ECCC
Confidence 555555555 5543
No 288
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.15 E-value=1.5e-09 Score=126.03 Aligned_cols=237 Identities=11% Similarity=0.023 Sum_probs=150.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.+...+|||||++||.....+ ...+| .+++...... .... +..+.|||||++|+..+.
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~~~~~----------v~~~~~s~~~~~l~~~~~--- 75 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVEIWNYETQVEVRSIQVTETP----------VRAGKFIARKNWIIVGSD--- 75 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC----------EEEEEEEGGGTEEEEEET---
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEEecCCCc----------EEEEEEeCCCCEEEEEeC---
Confidence 6789999999999999886543 34555 4444443333 2222 379999999999988643
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
...|.+||+++++..... ......+..+.|+|||+.
T Consensus 76 -----------------------------------------dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~-- 111 (814)
T 3mkq_A 76 -----------------------------------------DFRIRVFNYNTGEKVVDF-EAHPDYIRSIAVHPTKPY-- 111 (814)
T ss_dssp -----------------------------------------TSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSE--
T ss_pred -----------------------------------------CCeEEEEECCCCcEEEEE-ecCCCCEEEEEEeCCCCE--
Confidence 267999999888764431 233446788999999997
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC--CceecCCCCccccceeEcC-CCCeEE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSP-DGKFLV 276 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lt~~~~~~~~~~~sp-dg~~l~ 276 (715)
|+... .+..|.++|+ .++ ....+......+....|+| ||+.|+
T Consensus 112 --l~~~~---------------~dg~i~vw~~-----------------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 112 --VLSGS---------------DDLTVKLWNW-----------------ENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp --EEEEE---------------TTSEEEEEEG-----------------GGTSEEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred --EEEEc---------------CCCEEEEEEC-----------------CCCceEEEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 77654 2236777786 333 3345556667788999999 788777
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc--CCCEEEEEeeeC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWG 354 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--dg~~l~~~~~~~ 354 (715)
..+.+. .|.++|+.++........ .....+..+.|+| ++..++. ...+
T Consensus 158 ~~~~dg-----------~v~vwd~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~l~~-~~~d 207 (814)
T 3mkq_A 158 SGCLDR-----------TVKVWSLGQSTPNFTLTT------------------GQERGVNYVDYYPLPDKPYMIT-ASDD 207 (814)
T ss_dssp EEETTS-----------EEEEEETTCSSCSEEEEC------------------CCTTCCCEEEECCSTTCCEEEE-ECTT
T ss_pred EEeCCC-----------eEEEEECCCCcceeEEec------------------CCCCCEEEEEEEECCCCCEEEE-EeCC
Confidence 666542 488888876543211100 0011345667888 8875544 4434
Q ss_pred CeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 355 SSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
+ .+..+|+.+++...... ....+....|++++..++....+ ..|.+.++.+
T Consensus 208 g--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~v~vwd~~~ 259 (814)
T 3mkq_A 208 L--TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED----GTLKIWNSST 259 (814)
T ss_dssp S--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT----SCEEEEETTT
T ss_pred C--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC----CeEEEEECCC
Confidence 3 67777888877655433 33445556788888766554422 2355555543
No 289
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.15 E-value=1.2e-09 Score=115.97 Aligned_cols=236 Identities=8% Similarity=0.039 Sum_probs=135.0
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
......+||||++||.....+ ...+| .+++..... ....+ .+..+.|+|||+.|+..+.
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~---~~h~~------~v~~~~~~~~~~~l~s~s~----- 159 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEG-----DIKVLDSNFNLQREID---QAHVS------EITKLKFFPSGEALISSSQ----- 159 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTS-----CEEEECTTSCEEEEET---TSSSS------CEEEEEECTTSSEEEEEET-----
T ss_pred ceEEEEEecCCCEEEEEECCC-----CEEEEeCCCcceeeec---ccccC------ccEEEEECCCCCEEEEEeC-----
Confidence 345567899999999876543 34556 333332221 11111 2379999999998876532
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...|.+||+.+++.. .+ ......+..++|+|||+.
T Consensus 160 ---------------------------------------d~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~--- 195 (420)
T 3vl1_A 160 ---------------------------------------DMQLKIWSVKDGSNPRTL--IGHRATVTDIAIIDRGRN--- 195 (420)
T ss_dssp ---------------------------------------TSEEEEEETTTCCCCEEE--ECCSSCEEEEEEETTTTE---
T ss_pred ---------------------------------------CCeEEEEeCCCCcCceEE--cCCCCcEEEEEEcCCCCE---
Confidence 267999999887643 34 233446788999999997
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCC---------------------
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--------------------- 258 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--------------------- 258 (715)
|+..+ .+..|.++|+ .+++. ..+..
T Consensus 196 -l~s~~---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 196 -VLSAS---------------LDGTIRLWEC-----------------GTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred -EEEEc---------------CCCcEEEeEC-----------------CCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 76544 1224556665 22222 11211
Q ss_pred ---CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCC
Q 005093 259 ---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSI 335 (715)
Q Consensus 259 ---~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~ 335 (715)
.......+.|||||+.|+..+.+. .|.++|+.+++...... . .+...+
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~----------~--------~~~~~v 293 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSG-----------VITVHNVFSKEQTIQLP----------S--------KFTCSC 293 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTS-----------CEEEEETTTCCEEEEEC----------C--------TTSSCE
T ss_pred eecccCcccceEEcCCCCEEEEEcCCC-----------eEEEEECCCCceeEEcc----------c--------ccCCCc
Confidence 123466788999999887766542 38888987654311100 0 011234
Q ss_pred CCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEEecC-CCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 336 LSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 336 ~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
..+.|+|+++.++++...++ .|..+|+.+++ ...+.. ....+. ..++++++ ++++. +.+ ..|.+.++..
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~-~l~s~-~~d--~~v~iw~~~~ 365 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENG--MLAQWDLRSPECPVGEFLINEGTPIN-NVYFAAGA-LFVSS-GFD--TSIKLDIISD 365 (420)
T ss_dssp EEEEECSSCTTEEEEEETTS--EEEEEETTCTTSCSEEEEESTTSCEE-EEEEETTE-EEEEE-TTT--EEEEEEEECC
T ss_pred eeEEEeCCCCCEEEEEeCCC--eEEEEEcCCCcCchhhhhccCCCCce-EEEeCCCC-EEEEe-cCC--ccEEEEeccC
Confidence 56789999985555555554 56667887764 344443 222222 23445554 44333 222 2355555543
No 290
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.14 E-value=3.1e-09 Score=112.34 Aligned_cols=234 Identities=12% Similarity=0.032 Sum_probs=136.8
Q ss_pred cccccceEEeeCC-CCceEEEEecCCCCCCeEEEEecCC------ccE-EEEecCccccccccCCCcccceeecCCCCeE
Q 005093 40 VEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELWSQS------QLE-KEFHVPQTVHGSVYADGWFEGISWNSDETLI 111 (715)
Q Consensus 40 ~~~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~l 111 (715)
.+.+.+...+||| +++.||..... +.-.+|.+..++ +.. .+...... +..+.|+|+|+.+
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~d--g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSED--CTVMVWEIPDGGLVLPLREPVITLEGHTKR----------VGIVAWHPTAQNV 146 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETT--SEEEEEECCTTCCSSCBCSCSEEEECCSSC----------EEEEEECSSBTTE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCC--CeEEEEEccCCCCccccCCceEEecCCCCe----------EEEEEECcCCCCE
Confidence 3447799999999 88888776544 222233332221 122 22212222 3789999999655
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC-CCCCCccceEE
Q 005093 112 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVV 190 (715)
Q Consensus 112 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~~~~~~~~~ 190 (715)
++.+.. ...|.+||+.+++...... ......+..+.
T Consensus 147 l~s~~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 147 LLSAGC-------------------------------------------DNVILVWDVGTGAAVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp EEEEET-------------------------------------------TSCEEEEETTTTEEEEEECTTTCCSCEEEEE
T ss_pred EEEEcC-------------------------------------------CCEEEEEECCCCCccEEEecCCCCCceEEEE
Confidence 555432 2569999999887654310 12334677899
Q ss_pred EecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eec-CCCCcc-cccee
Q 005093 191 WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL-TESISS-AFFPR 267 (715)
Q Consensus 191 ~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l-t~~~~~-~~~~~ 267 (715)
|+|||+. |+... .+..|.++|+ .+++. ..+ ...... .....
T Consensus 184 ~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 184 WSRDGAL----ICTSC---------------RDKRVRVIEP-----------------RKGTVVAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp ECTTSSC----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECSSCSSSCCEEE
T ss_pred ECCCCCE----EEEEe---------------cCCcEEEEeC-----------------CCCceeeeeccCCCCCcceEEE
Confidence 9999998 77765 2346888887 44443 333 333333 67899
Q ss_pred EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEE
Q 005093 268 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 347 (715)
Q Consensus 268 ~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l 347 (715)
|+|||+.|+...... ....|.++|+.+.+....... .. ....+..+.|+||++.+
T Consensus 228 ~~~~~~~l~~g~~~~--------~d~~i~iwd~~~~~~~~~~~~---------~~--------~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 228 FVSEGKILTTGFSRM--------SERQVALWDTKHLEEPLSLQE---------LD--------TSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp ECSTTEEEEEEECTT--------CCEEEEEEETTBCSSCSEEEE---------CC--------CCSSCEEEEEETTTTEE
T ss_pred EcCCCcEEEEeccCC--------CCceEEEEcCccccCCceEEe---------cc--------CCCceeEEEEcCCCCEE
Confidence 999998776553221 124688999876543110000 00 01134566899999987
Q ss_pred EEEeeeCCeeEEEEEECCCCc--EEEecCC--CCCceeEEEeecCCEE
Q 005093 348 LLSSIWGSSQVIISVNVSSGE--LLRITPA--ESNFSWSLLTLDGDNI 391 (715)
Q Consensus 348 ~~~~~~~~~~~l~~~d~~tg~--~~~l~~~--~~~~~~~~~s~~~~~l 391 (715)
+++...++...+ +|+.+++ ...+... ...+....|++++..+
T Consensus 283 ~~~g~~dg~i~i--~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 283 YLCGKGDSSIRY--FEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLE 328 (402)
T ss_dssp EEEETTCSCEEE--EEECSSTTCEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred EEEEcCCCeEEE--EEecCCCcceEeecccccCCcccceEEecccccc
Confidence 776655554445 4555665 4444322 2334445777776544
No 291
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=99.14 E-value=2.2e-10 Score=113.79 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=69.1
Q ss_pred EEEEEcCCCCCCCC-ccchHHHHHHHhC--CcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 483 LIVVLHGGPHSVSL-SSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 483 ~vv~iHGg~~~~~~-~~~~~~~~~la~~--G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
.||++||.+..... ..|......|++. |+.|+++|+ | +|.+..... .+.....+++.++++.+...... .
T Consensus 7 pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G---~g~s~~~~~--~~~~~~~~~~~~~~~~l~~~~~l-~ 79 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-G---KTLREDVEN--SFFLNVNSQVTTVCQILAKDPKL-Q 79 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-S---SSHHHHHHH--HHHSCHHHHHHHHHHHHHSCGGG-T
T ss_pred cEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-C---CCCcccccc--ccccCHHHHHHHHHHHHHhhhhc-c
Confidence 38999996544312 4678888888765 889999997 7 554321000 00011123333444444432111 2
Q ss_pred ceEEEEEeChhHHHHHHHHhhCCCc-eeEEEecCCc
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQAPDK-FVAAAARNPL 594 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~ 594 (715)
+++.++||||||.++..++.++|+. ++.+|++++.
T Consensus 80 ~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred CCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 6899999999999999999999984 9999987754
No 292
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.14 E-value=2.1e-09 Score=114.01 Aligned_cols=288 Identities=15% Similarity=0.125 Sum_probs=160.6
Q ss_pred ccceEEeeCCCCc-eEEEEecCCCCCCeEEEEe---cCCc------cEEEEecCcccccccc-CCCcccceeecCCCCeE
Q 005093 43 TGASAVVPSPSGS-KLLVVRNPENESPIQFELW---SQSQ------LEKEFHVPQTVHGSVY-ADGWFEGISWNSDETLI 111 (715)
Q Consensus 43 ~~~~~~~~Spdg~-~la~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~wSpDg~~l 111 (715)
+.+...+|||||+ .||..... +.-.+|.+. .+++ .......+...+.... ..+.+..+.|||||+.|
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred CceEEEEECCCCCcEEEEecCC--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 5688999999999 88876543 444555552 2223 1222222111100000 01134799999999999
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCc-----
Q 005093 112 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLS----- 185 (715)
Q Consensus 112 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~----- 185 (715)
+......... .|. ..................+.|.++ +..+ .......|.+||+.+++..... ......
T Consensus 124 ~~~~~dg~i~--i~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~ 198 (425)
T 1r5m_A 124 VTGVENGELR--LWN-KTGALLNVLNFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVISGTVMQHF-ELKETGGSSIN 198 (425)
T ss_dssp EEEETTSCEE--EEE-TTSCEEEEECCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETTTTEEEEEE-CCC--------
T ss_pred EEEeCCCeEE--EEe-CCCCeeeeccCCCccEEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEe-eccccCcccee
Confidence 8876543221 222 101111111112223334556665 3333 3333578999999888765431 111112
Q ss_pred ----------cceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-Cce
Q 005093 186 ----------VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVV 254 (715)
Q Consensus 186 ----------~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 254 (715)
+..+.|+|++. ++... ....|+++|+ .++ ...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~---------------~~g~i~~~d~-----------------~~~~~~~ 241 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDK-----FVIPG---------------PKGAIFVYQI-----------------TEKTPTG 241 (425)
T ss_dssp -------CCCBSCCEEEETTE-----EEEEC---------------GGGCEEEEET-----------------TCSSCSE
T ss_pred eccccCCcceeeEEEEcCCCE-----EEEEc---------------CCCeEEEEEc-----------------CCCceee
Confidence 67788999854 44433 2246888887 433 344
Q ss_pred ecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCC
Q 005093 255 NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 334 (715)
Q Consensus 255 ~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (715)
.+......+....|+|||+.|+..+.+. .|+++|+.+++....... +...
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~-------------------~~~~ 291 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDG-----------TLRIWHGGNGNSQNCFYG-------------------HSQS 291 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTS-----------CEEEECSSSBSCSEEECC-------------------CSSC
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCC-----------EEEEEECCCCccceEecC-------------------CCcc
Confidence 5555666788899999999887766542 488888876543211100 0113
Q ss_pred CCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 335 ILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 335 ~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+..+.|+|++ ++++...++ .|..+|+.+++....... ...+....++++++.|+....+ ..|.+.++.+.
T Consensus 292 i~~~~~~~~~--~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~~ 362 (425)
T 1r5m_A 292 IVSASWVGDD--KVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD----GQVNVYDLKKL 362 (425)
T ss_dssp EEEEEEETTT--EEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT----SCEEEEECHHH
T ss_pred EEEEEECCCC--EEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC----CeEEEEECCCC
Confidence 4567799998 444444444 677778888876655443 3345556788888776654422 34777776544
No 293
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.13 E-value=7.9e-10 Score=117.24 Aligned_cols=295 Identities=15% Similarity=0.153 Sum_probs=156.7
Q ss_pred ccceEEeeCCCCceEEEEecCCC------CCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 43 TGASAVVPSPSGSKLLVVRNPEN------ESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
..+...+|||||+.++++....+ .......+| ..+...+.... .... ..+..+.|||||+.|+..
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~------~~v~~~~~s~~~~~l~~~ 85 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVD------SKFNDLDWSHNNKIIAGA 85 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCS------SCEEEEEECSSSSCEEEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecC------CceEEEEECCCCCeEEEE
Confidence 34677899999985655652211 111223334 22221111100 0111 123799999999999887
Q ss_pred eecCCCCCCCccCCCCC----CCCCCcCCCCCCCCCcccCCcCcccC-CccCceEEEEEccCCc------eEe-ec-CCC
Q 005093 115 AEEPSPSKPTFSLGSTK----GGSSDKDCNSWKGQGDWEEDWGETYA-GKRQPSLFVININSGE------VQA-VK-GIP 181 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~l~~~~~~~g~------~~~-l~-~~~ 181 (715)
..+.... .|...... ..............+.|.++.+..+. ......|.+||+.+++ ... +. ...
T Consensus 86 ~~dg~v~--vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 86 LDNGSLE--LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp ESSSCEE--EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred ccCCeEE--EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 6554322 22222210 11111123334445667766333332 2234789999998876 221 10 012
Q ss_pred CCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC-
Q 005093 182 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES- 259 (715)
Q Consensus 182 ~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~- 259 (715)
....+..+.|+|++.. +++++. .+..|.++|+ .+++. ..+...
T Consensus 164 ~~~~v~~~~~~~~~~~----~l~~~~--------------~dg~v~iwd~-----------------~~~~~~~~~~~~~ 208 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAH----VFASAG--------------SSNFASIWDL-----------------KAKKEVIHLSYTS 208 (416)
T ss_dssp SSCCCCEEEECSSCTT----EEEEES--------------SSSCEEEEET-----------------TTTEEEEEECCCC
T ss_pred CCCCeeEEEeCCCCCc----EEEEEc--------------CCCCEEEEEC-----------------CCCCcceEEeccc
Confidence 2345778999999766 666653 2236888887 44433 333333
Q ss_pred -----CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC-CCcccceeeeeeceecCCCCCccccccC
Q 005093 260 -----ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVDVIPVVQCAEGDCFPGLYSS 333 (715)
Q Consensus 260 -----~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~g~~~~ 333 (715)
...+....|+|+|+.++++...+ .....|+++|+.++.. ....... +..
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------~~~~~i~~~d~~~~~~~~~~~~~~------------------~~~ 263 (416)
T 2pm9_A 209 PNSGIKQQLSVVEWHPKNSTRVATATGS-------DNDPSILIWDLRNANTPLQTLNQG------------------HQK 263 (416)
T ss_dssp CSSCCCCCEEEEEECSSCTTEEEEEECC-------SSSCCCCEEETTSTTSCSBCCCSC------------------CSS
T ss_pred cccccCCceEEEEECCCCCCEEEEEECC-------CCCceEEEEeCCCCCCCcEEeecC------------------ccC
Confidence 45688899999986554444432 1112588889877532 1111000 111
Q ss_pred CCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEEe-cCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 334 SILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 334 ~~~~~~~~~-dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
.+..+.|+| +++ ++++...++ .|..+|+.+++.... ......+....|++++..++++.+. -..|.+.++.+
T Consensus 264 ~v~~~~~s~~~~~-~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~ 337 (416)
T 2pm9_A 264 GILSLDWCHQDEH-LLLSSGRDN--TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF---DNKIEVQTLQN 337 (416)
T ss_dssp CEEEEEECSSCSS-CEEEEESSS--EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS---SSEEEEEESCC
T ss_pred ceeEEEeCCCCCC-eEEEEeCCC--CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec---CCcEEEEEccC
Confidence 345678999 776 445555444 566678887776544 3333344556888888444444432 23466666654
Q ss_pred c
Q 005093 412 K 412 (715)
Q Consensus 412 ~ 412 (715)
.
T Consensus 338 ~ 338 (416)
T 2pm9_A 338 L 338 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 294
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.13 E-value=2.6e-11 Score=128.28 Aligned_cols=112 Identities=12% Similarity=0.036 Sum_probs=81.0
Q ss_pred CCCcEEEEEcCCCCCCCCccchH-HHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 556 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~-~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 556 (715)
...|+||++||.+... ...|.. .+..|++ .||.|+++|+|| +|.+.......+ ......|+.++++++.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g---~g~s~~~~~~~~-~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKG---GSKAQYSQASQN-IRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHH---HHTSCHHHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECcc---ccCccchhhHhh-HHHHHHHHHHHHHHHHHhcC
Confidence 4578999999966542 235655 6677766 899999999998 333211100000 01124678888888876544
Q ss_pred CCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 557 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 557 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
++.+++.|+|||+||.+++.++.++|++++++++++|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 567899999999999999999999999999999888754
No 295
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.12 E-value=1.7e-08 Score=105.73 Aligned_cols=276 Identities=12% Similarity=0.108 Sum_probs=153.6
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+.+...+|||||++|+-.+..+ ...+| .+++......... .++..++|+|||+.|+..+.+.
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~h~---------~~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDG-----RLIVWNALTSQKTHAIKLHC---------PWVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECCC---------TTCCCCEECTTSSEEEECCSSS
T ss_pred cccEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCccceEEecCC---------CCEEEEEECCCCCEEEEeeCCC
Confidence 446789999999999998765543 45667 3444333332211 1237899999999998765544
Q ss_pred CCCCCCccCCCCC-------CCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecC----CCCCCcc
Q 005093 119 SPSKPTFSLGSTK-------GGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKG----IPKSLSV 186 (715)
Q Consensus 119 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~----~~~~~~~ 186 (715)
... .|...... ................|.++.+..+ .......|.+||+.+++...... ......+
T Consensus 131 ~v~--iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 131 ACS--IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp CCE--EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred cEE--EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 322 22211100 0001111222333445555422222 22345789999999987654311 1112345
Q ss_pred ceEEEec-CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccc
Q 005093 187 GQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFF 265 (715)
Q Consensus 187 ~~~~~sp-dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~ 265 (715)
..+.|+| ++. ++.++. .+..|.++|+. ........+..+...+..
T Consensus 209 ~~~~~~~~~~~-----~l~sgs--------------~D~~v~~wd~~---------------~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 209 LSLSINSLNAN-----MFISGS--------------CDTTVRLWDLR---------------ITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp EEEEECSSSCC-----EEEEEE--------------TTSCEEEEETT---------------TTCCCCEEECCCSSCCCE
T ss_pred EEEEeecCCCC-----EEEEEE--------------CCCeEEEEECC---------------CCCcceEEECCcCCCeEE
Confidence 6778877 555 454442 22357777861 012344556667778899
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCC
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 345 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~ 345 (715)
..|+|||+.|+-.+.+. .|.++|+.++......... ....+... ..+..++|+|+|+
T Consensus 255 v~~~p~~~~l~s~s~D~-----------~i~lwd~~~~~~~~~~~~~-------~~~~~~~~-----~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDG-----------TCRLFDMRTGHQLQVYNRE-------PDRNDNEL-----PIVTSVAFSISGR 311 (380)
T ss_dssp EEECTTSSEEEEECSSS-----------CEEEEETTTTEEEEEECCC-------CSSSCCSS-----CSCSEEEECSSSS
T ss_pred EEEecCCCeEEEEcCCC-----------eEEEEECCCCcEEEEeccc-------cccccccc-----CceEEEEECCCCC
Confidence 99999999887666553 4888888775432110000 00000000 1245678999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEEEec-----CCCCCceeEEEeecCCEEE
Q 005093 346 TMLLSSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNII 392 (715)
Q Consensus 346 ~l~~~~~~~~~~~l~~~d~~tg~~~~l~-----~~~~~~~~~~~s~~~~~l~ 392 (715)
.++. ...++ .++.+|+.+++..... .....+....|++++..|+
T Consensus 312 ~l~~-g~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 312 LLFA-GYSNG--DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp EEEE-ECTTS--CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred EEEE-EECCC--CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 5544 44344 5666788777755432 1222345567888887654
No 296
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.12 E-value=1.8e-08 Score=110.41 Aligned_cols=266 Identities=9% Similarity=0.022 Sum_probs=151.3
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEec---CCccEEEEecCccccccccCCCcccceeecC----CCCeEEEEeec
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQLEKEFHVPQTVHGSVYADGWFEGISWNS----DETLIAYVAEE 117 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSp----Dg~~la~~~~~ 117 (715)
+...++||||++|+..... + .+..++. +++....+...... ..+.||| ||++|+.....
T Consensus 181 ~~~v~~spdg~~l~v~~~d--~--~V~v~D~~~~t~~~~~~i~~g~~p----------~~va~sp~~~~dg~~l~v~~~~ 246 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD--A--RIDMIDLWAKEPTKVAEIKIGIEA----------RSVESSKFKGYEDRYTIAGAYW 246 (543)
T ss_dssp EEEEEECTTSCEEEEEETT--S--EEEEEETTSSSCEEEEEEECCSEE----------EEEEECCSTTCTTTEEEEEEEE
T ss_pred cceEEECCCCCEEEEECCC--C--eEEEEECcCCCCcEEEEEecCCCc----------ceEEeCCCcCCCCCEEEEEEcc
Confidence 5677899999998766543 2 3443333 33333333322222 6899999 99988775432
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC----------CCccc
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK----------SLSVG 187 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----------~~~~~ 187 (715)
..+|.+||.++++........+ +..+.
T Consensus 247 -------------------------------------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 247 -------------------------------------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp -------------------------------------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred -------------------------------------------CCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 2668899998887654311110 11345
Q ss_pred eEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-e--ecCCCCcccc
Q 005093 188 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-V--NLTESISSAF 264 (715)
Q Consensus 188 ~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~lt~~~~~~~ 264 (715)
.+.+|||++. ++++.. ....|+++|+ .+... . .+. ......
T Consensus 284 ~i~~s~~~~~----~~vs~~--------------~~g~i~vvd~-----------------~~~~~l~~~~i~-~~~~~~ 327 (543)
T 1nir_A 284 AIIASHEHPE----FIVNVK--------------ETGKVLLVNY-----------------KDIDNLTVTSIG-AAPFLH 327 (543)
T ss_dssp EEEECSSSSE----EEEEET--------------TTTEEEEEEC-----------------TTSSSCEEEEEE-CCSSCC
T ss_pred EEEECCCCCE----EEEEEC--------------CCCeEEEEEe-----------------cCCCcceeEEec-cCcCcc
Confidence 7889999997 766542 2347999997 33322 1 221 233467
Q ss_pred ceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cc------------------------cc-eeeeeec
Q 005093 265 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SL------------------------EK-IVDVIPV 318 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt------------------------~~-~~~~~~~ 318 (715)
...|||||++|+...+.+ ..|.++|+.+++... +. .. .+..+.+
T Consensus 328 ~~~~spdg~~l~va~~~~----------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v 397 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNS----------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISL 397 (543)
T ss_dssp CEEECTTSCEEEEEEGGG----------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEE
T ss_pred CceECCCCCEEEEEecCC----------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEE
Confidence 789999999886555432 236666665543211 00 00 0112223
Q ss_pred eecCCCCC----cc--c-c--ccCCCCCCccccCCCEEEEEeeeC----CeeEEEEEECCCCcEE-Eec---------CC
Q 005093 319 VQCAEGDC----FP--G-L--YSSSILSNPWLSDGCTMLLSSIWG----SSQVIISVNVSSGELL-RIT---------PA 375 (715)
Q Consensus 319 ~~~~~~~~----~~--g-~--~~~~~~~~~~~~dg~~l~~~~~~~----~~~~l~~~d~~tg~~~-~l~---------~~ 375 (715)
+....... .. + + ...+...+.++|||+.|+.....+ ....|..+|+++++.. .+. ..
T Consensus 398 ~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 398 IGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp EECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred EEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 33222100 00 0 0 111234567899999887654211 1457888999887754 331 22
Q ss_pred CCCceeEEEeecCCEEEEEEeCC-CCCCeEEEEeecccC
Q 005093 376 ESNFSWSLLTLDGDNIIAVSSSP-VDVPQVKYGYFVDKA 413 (715)
Q Consensus 376 ~~~~~~~~~s~~~~~l~~~~~~~-~~p~~l~~~~~~~~~ 413 (715)
........|+++|+.++++.-+. .....|.++|..+.+
T Consensus 478 ~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 478 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 22233457899999999876433 456778888866543
No 297
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.11 E-value=1.1e-10 Score=125.86 Aligned_cols=134 Identities=19% Similarity=0.197 Sum_probs=92.6
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-chHHHHHHHhCC-cEEEEEcCCCC-CCCchhhhhc--CC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSVG-YSLLIVNYRGS-LGFGEEALQS--LP 533 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~-~~~~~~~la~~G-~~vi~~d~rG~-~~~g~~~~~~--~~ 533 (715)
+.|++.+ .+|.|.. ..++.|+||++|||++..+... .......|+++| ++|+.+|||.. .||+...... ..
T Consensus 81 ~edcl~l--~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~ 156 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAY 156 (498)
T ss_dssp BSCCCEE--EEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGG
T ss_pred CCCCcEE--EEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccc
Confidence 3456555 4778862 4567899999999986554332 122345677766 99999999931 1243221100 01
Q ss_pred CCCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcch
Q 005093 534 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 596 (715)
Q Consensus 534 ~~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~~ 596 (715)
...+...+.|+.++++|+.++. ..|+++|.|+|+|+||.+++.++... +.+|+++|+.+|...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 1223344889999999998862 36899999999999999998887753 458999999998654
No 298
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.11 E-value=2.9e-09 Score=113.11 Aligned_cols=256 Identities=11% Similarity=-0.001 Sum_probs=150.3
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
...++|||||++|+.....+ . ..+| ..++....... + .......|+|||++|+..+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~----~-v~i~d~~~~~~~~~~~~----~------~~~~~~~~~~~~~~l~~~~~------ 117 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDG----H-DFLFNTIIRDGSKMLKR----A------DYTAVDTAKLQMRRFILGTT------ 117 (420)
T ss_dssp CTTCEEEEEETTEEEEEETT----E-EEEEECCSEETTTTSCS----C------CEEEEEEECSSSCEEEEEET------
T ss_pred ccceeeeecCCeEEEEEcCC----c-EEEEEecccceeeEEec----C------CceEEEEEecCCCEEEEEEC------
Confidence 34679999999999876653 2 3344 22222111111 1 11245579999999888632
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
...|.+||+++++..... ......+..++|+|||+. |
T Consensus 118 --------------------------------------dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l 154 (420)
T 3vl1_A 118 --------------------------------------EGDIKVLDSNFNLQREID-QAHVSEITKLKFFPSGEA----L 154 (420)
T ss_dssp --------------------------------------TSCEEEECTTSCEEEEET-TSSSSCEEEEEECTTSSE----E
T ss_pred --------------------------------------CCCEEEEeCCCcceeeec-ccccCccEEEEECCCCCE----E
Confidence 256899999988877662 233446788999999996 6
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
+..+ .+..|.++|+. .+.....+..+...+..+.|+|||+.|+..+.+.
T Consensus 155 ~s~s---------------~d~~i~iwd~~----------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 155 ISSS---------------QDMQLKIWSVK----------------DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp EEEE---------------TTSEEEEEETT----------------TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred EEEe---------------CCCeEEEEeCC----------------CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 6554 23468888871 3445556666777889999999999998666553
Q ss_pred CCCCCCccccceeEeeecCCCCCCCc-cc---ceeeeeeceecCC-CCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 283 SVDSGAHSATDSLHRIDWPTNGNFSS-LE---KIVDVIPVVQCAE-GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~~~~l-t~---~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
.|.++|+.+++.... .. ....+..+..... ...........+..+.|+|+|+.++ +...++
T Consensus 204 -----------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg-- 269 (420)
T 3vl1_A 204 -----------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSG-- 269 (420)
T ss_dssp -----------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEETTS--
T ss_pred -----------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEcCCC--
Confidence 377888876543211 10 0001111100000 0000001123456788999998554 444444
Q ss_pred EEEEEECCCCcEEEecCC--CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 358 VIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 358 ~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
.|..+|+.+++....... ...+....|++++..++++.+.- ..|.+.++.++
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~ 323 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSP 323 (420)
T ss_dssp CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCT
T ss_pred eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCC
Confidence 466678887775544332 22344567888887344444322 35777776544
No 299
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.11 E-value=7.3e-09 Score=111.26 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=88.7
Q ss_pred ceEEEEEcc--CCceEee-cCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh
Q 005093 162 PSLFVININ--SGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 238 (715)
Q Consensus 162 ~~l~~~~~~--~g~~~~l-~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 238 (715)
..|.+||+. +++.... ........+..++|+|||+. |+... ....|+.+++
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~----l~~~~---------------~~g~v~~~~~------- 178 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT----VIIAD---------------KFGDVYSIDI------- 178 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET-------
T ss_pred CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE----EEEEe---------------CCCcEEEEec-------
Confidence 568999988 6654433 10122345678999999997 76654 2346888887
Q ss_pred hhhhhhccCCCCCCce-----ecCCCCccccceeEcCC---CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCc-c
Q 005093 239 SELELKESSSEDLPVV-----NLTESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L 309 (715)
Q Consensus 239 ~~~~~~~~~~~~~~~~-----~lt~~~~~~~~~~~spd---g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~l-t 309 (715)
.++... .+......+..+.|+|| |+.|+..+.+. .|+++|+.++..... .
T Consensus 179 ----------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----------~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 179 ----------NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----------HIKISHYPQCFIVDKWL 237 (450)
T ss_dssp ----------TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----------CEEEEEESCTTCEEEEC
T ss_pred ----------CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----------cEEEEECCCCceeeeee
Confidence 333322 44445567888999999 88887666542 488888876543211 0
Q ss_pred cceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 310 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
.+ +...+..++|+ |++.|+ +...+ ..|..+|+.+++.....
T Consensus 238 ~~-------------------h~~~v~~~~~s-d~~~l~-s~~~d--~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 238 FG-------------------HKHFVSSICCG-KDYLLL-SAGGD--DKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp CC-------------------CSSCEEEEEEC-STTEEE-EEESS--SEEEEEETTTCCEEEEE
T ss_pred cC-------------------CCCceEEEEEC-CCCEEE-EEeCC--CeEEEEECCCCcEeeee
Confidence 00 11134567799 988555 44433 36777798888855443
No 300
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.11 E-value=2.5e-09 Score=110.91 Aligned_cols=270 Identities=12% Similarity=0.073 Sum_probs=151.5
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+.+...+|||||++||-....+ ...+| ..++......... .++..++|||||+.|+....+.
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~~---------~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMPC---------TWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECSS---------SCCCEEEECTTSSEEEEESTTS
T ss_pred CCCeEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCCcceEEecCC---------CCEEEEEECCCCCEEEEeeCCC
Confidence 346789999999999988765543 45667 3333333333221 1237899999999998765433
Q ss_pred CCCCCCccCCCCCCCCC------CcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEe
Q 005093 119 SPSKPTFSLGSTKGGSS------DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 192 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~s 192 (715)
... .+.......... ............|.++....+.......|.+||+++++..... ......+..+.|+
T Consensus 129 ~i~--v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 129 KCS--VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLA 205 (354)
T ss_dssp EEE--EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEEC
T ss_pred CEE--EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEE
Confidence 211 111111100000 0011222233445555222233334578999999988764431 2223345667787
Q ss_pred cC--CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEc
Q 005093 193 PL--NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFS 269 (715)
Q Consensus 193 pd--g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~s 269 (715)
|+ |+. |+ ++. .+..|.++|+ .+++ ...+..+...+...+|+
T Consensus 206 ~~~~g~~----l~-sgs--------------~Dg~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~ 249 (354)
T 2pbi_B 206 PSETGNT----FV-SGG--------------CDKKAMVWDM-----------------RSGQCVQAFETHESDVNSVRYY 249 (354)
T ss_dssp CCSSCCE----EE-EEE--------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEEC
T ss_pred eCCCCCE----EE-EEe--------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEe
Confidence 74 554 44 442 2236888887 4444 34555566778899999
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEE
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 349 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~ 349 (715)
|+|+.|+-.+.+. .|.++|+.++....+ ... .. .......+.|+|+|+.+ +
T Consensus 250 p~~~~l~s~s~D~-----------~v~lwd~~~~~~~~~----------~~~--~~-----~~~~~~~~~~s~~g~~l-~ 300 (354)
T 2pbi_B 250 PSGDAFASGSDDA-----------TCRLYDLRADREVAI----------YSK--ES-----IIFGASSVDFSLSGRLL-F 300 (354)
T ss_dssp TTSSEEEEEETTS-----------CEEEEETTTTEEEEE----------ECC--TT-----CCSCEEEEEECTTSSEE-E
T ss_pred CCCCEEEEEeCCC-----------eEEEEECCCCcEEEE----------EcC--CC-----cccceeEEEEeCCCCEE-E
Confidence 9999888766553 377888776432111 000 00 00123456799999855 4
Q ss_pred EeeeCCeeEEEEEECCCCcEEEe-cCCCCCceeEEEeecCCEEEEE
Q 005093 350 SSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 350 ~~~~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~~~~~l~~~ 394 (715)
+...++ .+..+|+.+++.... ......+....|++++..|+..
T Consensus 301 ~g~~d~--~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 301 AGYNDY--TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp EEETTS--CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEECCC--cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEE
Confidence 444444 455568877765543 3333445556788888766543
No 301
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.10 E-value=1.3e-08 Score=102.42 Aligned_cols=253 Identities=14% Similarity=0.034 Sum_probs=146.1
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
.....|+|+|||+.|+++...+ ..++.+...+... ....... ....+.++|||+ |++. ..
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~---~~i~~~~~~~~~~-~~~~~~~---------~~~~l~~~~dg~-l~v~-~~----- 87 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQ---NRTWAWSDDGQLS-PEMHPSH---------HQNGHCLNKQGH-LIAC-SH----- 87 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGG---TEEEEEETTSCEE-EEESSCS---------SEEEEEECTTCC-EEEE-ET-----
T ss_pred ccccCCeEeCCCCEEEEEeCCC---CEEEEEECCCCeE-EEECCCC---------CcceeeECCCCc-EEEE-ec-----
Confidence 3457899999999888876543 2677776333333 3322211 126899999998 3332 21
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC---CCccceEEEecCCCCCc
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~~~~~spdg~~~~ 199 (715)
....|+++|+++|+.+.+..... ......+.++|||+
T Consensus 88 -------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~--- 127 (296)
T 3e5z_A 88 -------------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS--- 127 (296)
T ss_dssp -------------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC---
T ss_pred -------------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC---
Confidence 12568999998888766521111 11345789999997
Q ss_pred cEEEEEeecCccc--eeeeee-eecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 200 QYLVFVGWSSETR--KLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 200 ~~i~~~~~~~~~~--~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
|+++....+.. ..+... .......||.++. . ++.+.+.........++|+|||+.|
T Consensus 128 --l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----------------~-g~~~~~~~~~~~~~gi~~s~dg~~l- 186 (296)
T 3e5z_A 128 --LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP-----------------D-GTLSAPIRDRVKPNGLAFLPSGNLL- 186 (296)
T ss_dssp --EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT-----------------T-SCEEEEECCCSSEEEEEECTTSCEE-
T ss_pred --EEEECCccccccccccccccccCCCcEEEEECC-----------------C-CCEEEeecCCCCCccEEECCCCCEE-
Confidence 66652100000 000000 0011247999985 4 6666665555566789999999988
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
++.... ..|+++++...+. +. .. ..++ ... . ..+..++++++|+ |++.. .
T Consensus 187 v~~~~~----------~~i~~~~~~~~g~--~~-~~---~~~~-~~~-~-------~~p~~i~~d~~G~-l~v~~----~ 236 (296)
T 3e5z_A 187 VSDTGD----------NATHRYCLNARGE--TE-YQ---GVHF-TVE-P-------GKTDGLRVDAGGL-IWASA----G 236 (296)
T ss_dssp EEETTT----------TEEEEEEECSSSC--EE-EE---EEEE-CCS-S-------SCCCSEEEBTTSC-EEEEE----T
T ss_pred EEeCCC----------CeEEEEEECCCCc--Cc-CC---CeEe-eCC-C-------CCCCeEEECCCCC-EEEEc----C
Confidence 665432 3588888763221 10 00 0111 000 0 1245678899997 66655 2
Q ss_pred eEEEEEECCCCcEEEecCCCCCceeEEEe-ecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 357 QVIISVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 357 ~~l~~~d~~tg~~~~l~~~~~~~~~~~~s-~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
..|+++|+++.....+..... .....|+ ++++.|+++..+ .|+++++.++
T Consensus 237 ~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~~~~ 287 (296)
T 3e5z_A 237 DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIETNVR 287 (296)
T ss_dssp TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEECSCC
T ss_pred CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEcccc
Confidence 478899997555556654444 4445674 677777776542 6888887654
No 302
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.10 E-value=4.4e-09 Score=108.71 Aligned_cols=275 Identities=10% Similarity=0.007 Sum_probs=151.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCC---CceEEEEecCCCCCCeEEEEe--cCCc-cEEEEecCcc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS---GSKLLVVRNPENESPIQFELW--SQSQ-LEKEFHVPQT 88 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd---g~~la~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~ 88 (715)
...|.++++.++........ .....+...+|+|+ |+.|+.....+ ...+| ..++ .......
T Consensus 43 d~~v~iw~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~--- 109 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREI-----EKAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNLEAPEMPVYSVKG--- 109 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEE-----EESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECTTSCSSCSEEECC---
T ss_pred CcEEEEEeCCCCcccceeee-----cccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeCCCCCccEEEEEe---
Confidence 55677777876543211111 12256899999999 68887765442 23445 3333 3332221
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
..+.|..-.+...+.|+|||+.|+..+.+ ..|.+||
T Consensus 110 ~~~~v~~~~~~~~~~~s~~~~~l~~~~~d--------------------------------------------~~i~vwd 145 (357)
T 3i2n_A 110 HKEIINAIDGIGGLGIGEGAPEIVTGSRD--------------------------------------------GTVKVWD 145 (357)
T ss_dssp CSSCEEEEEEESGGGCC-CCCEEEEEETT--------------------------------------------SCEEEEC
T ss_pred cccceEEEeeccccccCCCccEEEEEeCC--------------------------------------------CeEEEEe
Confidence 11112100111223679999988775332 5689999
Q ss_pred ccCCc--eEeecCCCC--CCccceEE----EecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 169 INSGE--VQAVKGIPK--SLSVGQVV----WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 169 ~~~g~--~~~l~~~~~--~~~~~~~~----~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
+.+++ ...+..... ...+..+. |+|+++. ++... .+..|..+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~--------- 197 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV----VCAGY---------------DNGDIKLFDL--------- 197 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE----EEEEE---------------TTSEEEEEET---------
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE----EEEEc---------------cCCeEEEEEC---------
Confidence 98775 333421111 12344555 7899986 66554 2247888897
Q ss_pred hhhhccCCCCCCceecCCCCccccceeEcC---CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeee
Q 005093 241 LELKESSSEDLPVVNLTESISSAFFPRFSP---DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 317 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~~~~~~~~~~sp---dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~ 317 (715)
.+++..........+....|+| +++.|+..+.+. .|+++|+.++....... ...
T Consensus 198 --------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~----~~~ 254 (357)
T 3i2n_A 198 --------RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEG-----------KFHVFDMRTQHPTKGFA----SVS 254 (357)
T ss_dssp --------TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTT-----------EEEEEEEEEEETTTEEE----EEE
T ss_pred --------ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCC-----------eEEEEeCcCCCccccee----eec
Confidence 6666655555666788999999 999887766542 47788876644321100 000
Q ss_pred ceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc------------------EEEecCCCCCc
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE------------------LLRITPAESNF 379 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~------------------~~~l~~~~~~~ 379 (715)
. .. +...+..+.|+|+++.++++...++...+|.++..... ...+......+
T Consensus 255 -~-~~--------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 255 -E-KA--------HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp -E-EC--------CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred -c-CC--------CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence 0 00 11234567899999867777777776677766532211 22233333334
Q ss_pred eeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 380 SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 380 ~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
....|++++..++++.+.- ..|.+.++.
T Consensus 325 ~~~~~s~~~~~l~~s~~~d---~~i~iw~~~ 352 (357)
T 3i2n_A 325 SSLDWSPDKRGLCVCSSFD---QTVRVLIVT 352 (357)
T ss_dssp EEEEECSSSTTEEEEEETT---SEEEEEEEC
T ss_pred eEEEEcCCCCeEEEEecCC---CcEEEEECC
Confidence 4457788877776444322 235555543
No 303
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.10 E-value=8e-09 Score=109.11 Aligned_cols=262 Identities=13% Similarity=0.099 Sum_probs=153.0
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (715)
....|+++++.++.. .++.... +.+.+...+|||||+.|+.....+ ...+| ..++...... ...+
T Consensus 111 ~d~~v~lw~~~~~~~--~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~~~~ 177 (401)
T 4aez_A 111 LERNVYVWNADSGSV--SALAETD---ESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKLRTMA---GHQA 177 (401)
T ss_dssp ETTEEEEEETTTCCE--EEEEECC---TTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CCSS
T ss_pred CCCeEEEeeCCCCcE--eEeeecC---CCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEEEEec---CCCC
Confidence 344566666655432 2221111 225689999999999998876543 23445 3444333332 1111
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
.+..+.| +++.|+..+. ...|.+||+..
T Consensus 178 ------~v~~~~~--~~~~l~~~~~--------------------------------------------dg~i~i~d~~~ 205 (401)
T 4aez_A 178 ------RVGCLSW--NRHVLSSGSR--------------------------------------------SGAIHHHDVRI 205 (401)
T ss_dssp ------CEEEEEE--ETTEEEEEET--------------------------------------------TSEEEEEETTS
T ss_pred ------ceEEEEE--CCCEEEEEcC--------------------------------------------CCCEEEEeccc
Confidence 2267888 4555555322 26799999984
Q ss_pred Cc--eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 172 GE--VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 172 g~--~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
+. ...+ ......+..+.|+|||+. |+..+ .+..|.++|+ .
T Consensus 206 ~~~~~~~~--~~~~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~-----------------~ 247 (401)
T 4aez_A 206 ANHQIGTL--QGHSSEVCGLAWRSDGLQ----LASGG---------------NDNVVQIWDA-----------------R 247 (401)
T ss_dssp SSCEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-----------------T
T ss_pred CcceeeEE--cCCCCCeeEEEEcCCCCE----EEEEe---------------CCCeEEEccC-----------------C
Confidence 33 3333 233446778999999986 66554 2236888887 4
Q ss_pred CCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcc
Q 005093 250 DLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 328 (715)
Q Consensus 250 ~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~ 328 (715)
++. ...+......+..+.|+|+|+.++.+.... ....|+++|+.++....... .
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs--------~d~~i~i~d~~~~~~~~~~~----------~------- 302 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT--------MDKQIHFWNAATGARVNTVD----------A------- 302 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT--------TTCEEEEEETTTCCEEEEEE----------C-------
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecCC--------CCCEEEEEECCCCCEEEEEe----------C-------
Confidence 443 345556667789999999998887776421 12358899987754321110 0
Q ss_pred ccccCCCCCCccccCCCEEEEEee-eCCeeEEEEEECCCCcEEEe---cCCCCCceeEEEeecCCEEEEEEeCCCCCCeE
Q 005093 329 GLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQV 404 (715)
Q Consensus 329 g~~~~~~~~~~~~~dg~~l~~~~~-~~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l 404 (715)
...+..+.|+|+++.++.... .++ .|..+|+.+++...+ ......+....|++++..|+.... -..|
T Consensus 303 ---~~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~----dg~i 373 (401)
T 4aez_A 303 ---GSQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS----DENL 373 (401)
T ss_dssp ---SSCEEEEEECSSSSEEEEEECTTTC--EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT----TSEE
T ss_pred ---CCcEEEEEECCCCCeEEEEeecCCC--cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC----CCcE
Confidence 013456789999997665532 344 455556656655543 233334455678888886654432 2356
Q ss_pred EEEeeccc
Q 005093 405 KYGYFVDK 412 (715)
Q Consensus 405 ~~~~~~~~ 412 (715)
.+.++.++
T Consensus 374 ~iw~~~~~ 381 (401)
T 4aez_A 374 KFWRVYDG 381 (401)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 66676544
No 304
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.09 E-value=2.5e-08 Score=106.49 Aligned_cols=258 Identities=11% Similarity=0.080 Sum_probs=147.7
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCC-CCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (715)
....|.++|+.+.... .. ..+..+.+.+...+||| ||++|+-.+.+ + ...+| ..+...+.+.......
T Consensus 140 ~dg~i~lWd~~~~~~~-~~---~~~~gH~~~V~~l~f~p~~~~~l~s~s~D--~---~v~iwd~~~~~~~~~~~~~~~~- 209 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKP-TF---IKGIGAGGSITGLKFNPLNTNQFYASSME--G---TTRLQDFKGNILRVFASSDTIN- 209 (435)
T ss_dssp TTSCEEEECSSCCSCC-EE---ECCCSSSCCCCEEEECSSCTTEEEEECSS--S---CEEEEETTSCEEEEEECCSSCS-
T ss_pred CCCEEEEEECCCCCce-eE---EEccCCCCCEEEEEEeCCCCCEEEEEeCC--C---EEEEeeccCCceeEEeccCCCC-
Confidence 4456677677655431 11 12223346789999999 67777654333 2 34566 3333333332222211
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
.++..+.|+|||+.|+.... ...|.+||+++
T Consensus 210 -----~~~~~~~~~~~~~~l~~g~~--------------------------------------------dg~i~~wd~~~ 240 (435)
T 4e54_B 210 -----IWFCSLDVSASSRMVVTGDN--------------------------------------------VGNVILLNMDG 240 (435)
T ss_dssp -----CCCCCEEEETTTTEEEEECS--------------------------------------------SSBEEEEESSS
T ss_pred -----ccEEEEEECCCCCEEEEEeC--------------------------------------------CCcEeeeccCc
Confidence 12368999999998877422 25699999987
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
.....+ ......+..+.|+|+++. ++.++..+ ..|.++|+ ...
T Consensus 241 ~~~~~~--~~h~~~v~~v~~~p~~~~----~~~s~s~d--------------~~v~iwd~-----------------~~~ 283 (435)
T 4e54_B 241 KELWNL--RMHKKKVTHVALNPCCDW----FLATASVD--------------QTVKIWDL-----------------RQV 283 (435)
T ss_dssp CBCCCS--BCCSSCEEEEEECTTCSS----EEEEEETT--------------SBCCEEET-----------------TTC
T ss_pred ceeEEE--ecccceEEeeeecCCCce----EEEEecCc--------------ceeeEEec-----------------ccc
Confidence 766665 233446788999999998 77766322 24666675 222
Q ss_pred C-c---eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCC
Q 005093 252 P-V---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDC 326 (715)
Q Consensus 252 ~-~---~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~ 326 (715)
. . .....+...+...+|||||++|+..+.+. .|.++|+.++.... +..... ..
T Consensus 284 ~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----------~i~iwd~~~~~~~~~~~~~~~-----------~~ 341 (435)
T 4e54_B 284 RGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----------EIRVYSASQWDCPLGLIPHPH-----------RH 341 (435)
T ss_dssp CSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----------CEEEEESSSSSSEEEECCCCC-----------CC
T ss_pred cccceEEEeeeccccccceeECCCCCeeEEEcCCC-----------EEEEEECCCCccceEEecccc-----------cc
Confidence 2 1 12223455678899999999998776553 48888887654311 100000 00
Q ss_pred ccccccCCCCCCccccCCCEEEEEeeeCC---------eeEEEEEECCCCcEEEecCC-C-C-CceeEEEeecCCEEE
Q 005093 327 FPGLYSSSILSNPWLSDGCTMLLSSIWGS---------SQVIISVNVSSGELLRITPA-E-S-NFSWSLLTLDGDNII 392 (715)
Q Consensus 327 ~~g~~~~~~~~~~~~~dg~~l~~~~~~~~---------~~~l~~~d~~tg~~~~l~~~-~-~-~~~~~~~s~~~~~l~ 392 (715)
.. ........|++++..++......+ ...|..+|..+|+....... . . ..+...|++++..|+
T Consensus 342 ~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~la 416 (435)
T 4e54_B 342 FQ---HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLA 416 (435)
T ss_dssp CS---SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEE
T ss_pred cc---cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEE
Confidence 00 011234567777776655543221 23477789888887654322 1 1 233346888887654
No 305
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.08 E-value=9.3e-09 Score=110.12 Aligned_cols=175 Identities=10% Similarity=0.071 Sum_probs=97.3
Q ss_pred CCCCCcccCCcCcccCCccCceEEEEEccC-CceEeec---C---CCCCCccceEEEecCCCCCccEEEEEeecCcccee
Q 005093 142 WKGQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVK---G---IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 214 (715)
Q Consensus 142 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-g~~~~l~---~---~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~ 214 (715)
....+.|.++ |..++......|.+||+.+ ++...+. . ......+..++|+|+|.. +++++..
T Consensus 179 ~v~~~~~~~~-~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~----~l~s~~~------ 247 (447)
T 3dw8_B 179 HINSISINSD-YETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN----TFVYSSS------ 247 (447)
T ss_dssp CCCEEEECTT-SSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT----EEEEEET------
T ss_pred ceEEEEEcCC-CCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc----EEEEEeC------
Confidence 3445567776 4555444568899999983 3333210 0 122335778999999944 5555422
Q ss_pred eeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-----ceecCCCCc------------cccceeEcCCCCeEEE
Q 005093 215 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESIS------------SAFFPRFSPDGKFLVF 277 (715)
Q Consensus 215 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~------------~~~~~~~spdg~~l~~ 277 (715)
+..|.++|+ .++. ...+..... .+....|+|||+.|+.
T Consensus 248 --------dg~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 248 --------KGTIRLCDM-----------------RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp --------TSCEEEEET-----------------TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred --------CCeEEEEEC-----------------cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 236788886 4443 344554443 6888999999999886
Q ss_pred EecCCCCCCCCccccceeEeeecCC-CCCCC-cccceeeeee-ceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPT-NGNFS-SLEKIVDVIP-VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~-~~~~~-lt~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
.+. . .|.++|+.+ +.... +.... .+.. +........ ......++|+|||+.| ++...+
T Consensus 303 ~~~-~-----------~v~iwd~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-----i~~~~~~~~s~~~~~l-~s~s~d 363 (447)
T 3dw8_B 303 RDY-L-----------SVKVWDLNMENRPVETYQVHE-YLRSKLCSLYENDC-----IFDKFECCWNGSDSVV-MTGSYN 363 (447)
T ss_dssp EES-S-----------EEEEEETTCCSSCSCCEESCG-GGTTTHHHHHHTSG-----GGCCCCEEECTTSSEE-EEECST
T ss_pred eeC-C-----------eEEEEeCCCCccccceeeccc-cccccccccccccc-----cccceEEEECCCCCEE-EEeccC
Confidence 554 2 488888875 33211 11000 0000 000000000 0012347899999866 444444
Q ss_pred CeeEEEEEECCCCcEEEec
Q 005093 355 SSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~~~l~ 373 (715)
+ .|+.+|+.+++...+.
T Consensus 364 g--~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 364 N--FFRMFDRNTKRDITLE 380 (447)
T ss_dssp T--EEEEEETTTCCEEEEE
T ss_pred C--EEEEEEcCCCcceeee
Confidence 4 5677798888876654
No 306
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.08 E-value=1e-10 Score=127.57 Aligned_cols=132 Identities=20% Similarity=0.169 Sum_probs=91.1
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHh-CCcEEEEEcCCC-CCCCchhhhhcCCCC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRG-SLGFGEEALQSLPGK 535 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la~-~G~~vi~~d~rG-~~~~g~~~~~~~~~~ 535 (715)
+.|.+.+ .+|.|+.. ..++.|+||++|||++..+.... ......|++ .|++|+.+|||. .-||+... ..+..
T Consensus 93 ~edcl~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~~ 167 (543)
T 2ha2_A 93 SEDCLYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSREA 167 (543)
T ss_dssp ESCCCEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSSC
T ss_pred CCcCCeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--CCCCC
Confidence 3455555 57788642 34568999999999876544321 122345554 899999999994 22232211 01112
Q ss_pred CCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcc
Q 005093 536 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 595 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~ 595 (715)
.+...+.|+.++++|+.++. ..|+++|.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 168 ~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 168 PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 23345889999999998862 37999999999999999998877642 46899999999853
No 307
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.07 E-value=1.6e-08 Score=102.99 Aligned_cols=233 Identities=12% Similarity=0.045 Sum_probs=138.0
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCc-c-EEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ-L-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+.+...+|||++..+++....+ +.-.+|.+..... . ..+..+. +... .+..+.|+|||++|+-.+.
T Consensus 16 H~~~V~~l~~~~~~~~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~-~h~~------~v~~~~~s~dg~~l~s~s~-- 85 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLLSASRD-KTLISWKLTGDDQKFGVPVRSFK-GHSH------IVQDCTLTADGAYALSASW-- 85 (319)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETT-SEEEEEEEEEETTEEEEEEEEEE-CCSS------CEEEEEECTTSSEEEEEET--
T ss_pred ccceEEEEEccCCCccEEEEecCC-ccEEEecCCCCCccccccceEEe-CCcc------cEEEEEECCCCCEEEEEeC--
Confidence 346789999999874444443333 3333444432111 1 1111111 1111 2278999999998877532
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
...|.+||+++++..... ......+..+.|+|+++.
T Consensus 86 ------------------------------------------D~~v~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~- 121 (319)
T 3frx_A 86 ------------------------------------------DKTLRLWDVATGETYQRF-VGHKSDVMSVDIDKKASM- 121 (319)
T ss_dssp ------------------------------------------TSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSCE-
T ss_pred ------------------------------------------CCEEEEEECCCCCeeEEE-ccCCCcEEEEEEcCCCCE-
Confidence 267999999988764331 233345778999999986
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCC------
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDG------ 272 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg------ 272 (715)
|+..+ .+..|.++|+ .+.....+......+....|+|++
T Consensus 122 ---l~s~s---------------~D~~i~vwd~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 122 ---IISGS---------------RDKTIKVWTI-----------------KGQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp ---EEEEE---------------TTSCEEEEET-----------------TSCEEEEECCCSSCEEEEEECCC------C
T ss_pred ---EEEEe---------------CCCeEEEEEC-----------------CCCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 66544 2235777786 555566666666677888888854
Q ss_pred CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 273 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 273 ~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
..|+-.+.+ ..|.++|+.+.+.... +.+ +...+..+.|+|||+.| ++..
T Consensus 167 ~~l~s~~~d-----------~~i~~wd~~~~~~~~~------------------~~~-h~~~v~~~~~sp~g~~l-~s~~ 215 (319)
T 3frx_A 167 VTIISAGND-----------KMVKAWNLNQFQIEAD------------------FIG-HNSNINTLTASPDGTLI-ASAG 215 (319)
T ss_dssp CEEEEEETT-----------SCEEEEETTTTEEEEE------------------ECC-CCSCEEEEEECTTSSEE-EEEE
T ss_pred cEEEEEeCC-----------CEEEEEECCcchhhee------------------ecC-CCCcEEEEEEcCCCCEE-EEEe
Confidence 355544443 2477888766432100 000 11234567899999854 4544
Q ss_pred eCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 353 WGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 353 ~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
.++ .|..+|+.+++..........+....|++++..++...
T Consensus 216 ~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 216 KDG--EIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp TTC--EEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE
T ss_pred CCC--eEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc
Confidence 444 56666888887655544444455568889887766543
No 308
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.06 E-value=2.2e-09 Score=124.65 Aligned_cols=243 Identities=10% Similarity=0.033 Sum_probs=145.2
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQTVHG 91 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~ 91 (715)
...|.++|+.++. ....++.. .+.+...+|||||++||.....+ ...+| .+++...... ....
T Consensus 34 ~g~v~iwd~~~~~-~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~~~~~~--- 99 (814)
T 3mkq_A 34 SGRVEIWNYETQV-EVRSIQVT-----ETPVRAGKFIARKNWIIVGSDDF-----RIRVFNYNTGEKVVDFEAHPDY--- 99 (814)
T ss_dssp TSEEEEEETTTTE-EEEEEECC-----SSCEEEEEEEGGGTEEEEEETTS-----EEEEEETTTCCEEEEEECCSSC---
T ss_pred CCEEEEEECCCCc-eEEEEecC-----CCcEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEecCCCC---
Confidence 3456666665433 22223222 26789999999999999886643 34455 4444433332 2222
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
+..+.|||||++|+..+. ...|.+|++++
T Consensus 100 -------v~~~~~s~~~~~l~~~~~--------------------------------------------dg~i~vw~~~~ 128 (814)
T 3mkq_A 100 -------IRSIAVHPTKPYVLSGSD--------------------------------------------DLTVKLWNWEN 128 (814)
T ss_dssp -------EEEEEECSSSSEEEEEET--------------------------------------------TSEEEEEEGGG
T ss_pred -------EEEEEEeCCCCEEEEEcC--------------------------------------------CCEEEEEECCC
Confidence 278999999999887532 25699999987
Q ss_pred C-ceEeecCCCCCCccceEEEec-CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC
Q 005093 172 G-EVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 249 (715)
Q Consensus 172 g-~~~~l~~~~~~~~~~~~~~sp-dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (715)
+ ...... ......+..+.|+| |++. |+... .+..|.++|+. .
T Consensus 129 ~~~~~~~~-~~~~~~v~~~~~~p~~~~~----l~~~~---------------~dg~v~vwd~~----------------~ 172 (814)
T 3mkq_A 129 NWALEQTF-EGHEHFVMCVAFNPKDPST----FASGC---------------LDRTVKVWSLG----------------Q 172 (814)
T ss_dssp TSEEEEEE-ECCSSCEEEEEEETTEEEE----EEEEE---------------TTSEEEEEETT----------------C
T ss_pred CceEEEEE-cCCCCcEEEEEEEcCCCCE----EEEEe---------------CCCeEEEEECC----------------C
Confidence 6 332221 23344677899999 7775 55544 23468888861 2
Q ss_pred CCCceecCCC-CccccceeEcC--CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCC
Q 005093 250 DLPVVNLTES-ISSAFFPRFSP--DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 326 (715)
Q Consensus 250 ~~~~~~lt~~-~~~~~~~~~sp--dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~ 326 (715)
......+... ...+..+.|+| ||+.|+..+.+ ..|.++|+.++...... ..
T Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----------g~i~~~d~~~~~~~~~~----------~~----- 226 (814)
T 3mkq_A 173 STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-----------LTIKIWDYQTKSCVATL----------EG----- 226 (814)
T ss_dssp SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-----------SEEEEEETTTTEEEEEE----------EC-----
T ss_pred CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----------CEEEEEECCCCcEEEEE----------cC-----
Confidence 2333334333 35678899999 99988766644 24888888764421100 00
Q ss_pred ccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCceeEEEeecCCEE
Q 005093 327 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNI 391 (715)
Q Consensus 327 ~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~~~~~l 391 (715)
+...+..+.|+|+++.++ +...++ .|..+|+.+++....... ...+....+++++..+
T Consensus 227 ----~~~~v~~~~~~~~~~~l~-~~~~dg--~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 227 ----HMSNVSFAVFHPTLPIII-SGSEDG--TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp ----CSSCEEEEEECSSSSEEE-EEETTS--CEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred ----CCCCEEEEEEcCCCCEEE-EEeCCC--eEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 111345677999998554 444444 466668888776554433 2334445667776643
No 309
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.05 E-value=1.7e-08 Score=102.17 Aligned_cols=222 Identities=11% Similarity=0.043 Sum_probs=134.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+...+|||||++|+-....+ ...+| .+++..+....... .+..+.|+|||+.|+..+.
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~s~---- 75 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVELWNYETQVEVRSIQVTET---------PVRAGKFIARKNWIIVGSD---- 75 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS---------CEEEEEEEGGGTEEEEEET----
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCceeEEeeccCC---------cEEEEEEeCCCCEEEEECC----
Confidence 6789999999999998765542 45566 33433333322111 2268999999998877533
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
...|.+||+++++..... ......+..++|+|+++.
T Consensus 76 ----------------------------------------d~~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~--- 111 (304)
T 2ynn_A 76 ----------------------------------------DFRIRVFNYNTGEKVVDF-EAHPDYIRSIAVHPTKPY--- 111 (304)
T ss_dssp ----------------------------------------TSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSE---
T ss_pred ----------------------------------------CCEEEEEECCCCcEEEEE-eCCCCcEEEEEEcCCCCE---
Confidence 267999999988754321 233345778999999986
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-Cc-eecCCCCccccceeEcC-CCCeEEE
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PV-VNLTESISSAFFPRFSP-DGKFLVF 277 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~lt~~~~~~~~~~~sp-dg~~l~~ 277 (715)
|+..+ .+..|.++|+ .++ .. ..+..+...+...+|+| |++.|+-
T Consensus 112 -l~sgs---------------~D~~v~lWd~-----------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 112 -VLSGS---------------DDLTVKLWNW-----------------ENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp -EEEEE---------------TTSCEEEEEG-----------------GGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred -EEEEC---------------CCCeEEEEEC-----------------CCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 65443 2235777786 333 22 34555666788899999 5676765
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCcccc--CCCEEEEEeeeC
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWG 354 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--dg~~l~~~~~~~ 354 (715)
.+.+. .|.++|+.++.... +.... ...+..+.|++ ++. ++++...+
T Consensus 159 gs~D~-----------~v~iwd~~~~~~~~~~~~~~-------------------~~~v~~~~~~~~~~~~-~l~s~s~D 207 (304)
T 2ynn_A 159 GCLDR-----------TVKVWSLGQSTPNFTLTTGQ-------------------ERGVNYVDYYPLPDKP-YMITASDD 207 (304)
T ss_dssp EETTS-----------EEEEEETTCSSCSEEEECCC-------------------TTCEEEEEECCSTTCC-EEEEEETT
T ss_pred EeCCC-----------eEEEEECCCCCccceeccCC-------------------cCcEEEEEEEEcCCCC-EEEEEcCC
Confidence 55442 48888886544311 10000 00122234444 665 45555555
Q ss_pred CeeEEEEEECCCCcEEEec-CCCCCceeEEEeecCCEEE
Q 005093 355 SSQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNII 392 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~~~~~l~ 392 (715)
+ .|..+|+.+++..... .....+....|++++..|+
T Consensus 208 ~--~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 208 L--TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp S--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred C--eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 5 4555688887765443 3333445567788777554
No 310
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.05 E-value=9.8e-10 Score=134.05 Aligned_cols=273 Identities=10% Similarity=-0.027 Sum_probs=158.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
..+...++||+|+.++.....+ .+.... ..++...... +..+ .+..+.|||||++|+..+.+....
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g----~i~i~d~~~~~~~~~~~---~h~~------~v~~l~~s~dg~~l~s~~~dg~i~ 1028 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDG----AIKIIELPNNRVFSSGV---GHKK------AVRHIQFTADGKTLISSSEDSVIQ 1028 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTS----CCEEEETTTTSCEEECC---CCSS------CCCCEEECSSSSCEEEECSSSBEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCC----CEEEEEcCCCceeeecc---cCCC------ceEEEEECCCCCEEEEEcCCCEEE
Confidence 4578889999999998876553 233333 3344332221 1111 237999999999998876543221
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
.|........ ...........+.+.++ +..+.......|.+||+.+++..... ......+..++|||||+.
T Consensus 1029 --vwd~~~~~~~-~~~~~~~~v~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~~v~~~~~s~d~~~---- 1099 (1249)
T 3sfz_A 1029 --VWNWQTGDYV-FLQAHQETVKDFRLLQD-SRLLSWSFDGTVKVWNVITGRIERDF-TCHQGTVLSCAISSDATK---- 1099 (1249)
T ss_dssp --EEETTTTEEE-CCBCCSSCEEEEEECSS-SEEEEEESSSEEEEEETTTTCCCEEE-ECCSSCCCCEEECSSSSS----
T ss_pred --EEECCCCceE-EEecCCCcEEEEEEcCC-CcEEEEECCCcEEEEECCCCceeEEE-cccCCcEEEEEECCCCCE----
Confidence 2221111100 01111222223444444 33334444578999999988754331 233445778999999998
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecC
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~ 281 (715)
++..+ .+..|.++|+. .+.....+..+...+..++|||||+.|+..+.+
T Consensus 1100 l~s~s---------------~d~~v~iwd~~----------------~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A 1100 FSSTS---------------ADKTAKIWSFD----------------LLSPLHELKGHNGCVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp CEEEC---------------CSSCCCEECSS----------------SSSCSBCCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEc---------------CCCcEEEEECC----------------CcceeeeeccCCCcEEEEEECCCCCEEEEEeCC
Confidence 77665 22356677761 333445566666778899999999999877755
Q ss_pred CCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 282 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 282 ~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
. .|+++|+.+++.......... .... ..+...+..++|+|||+.++... ..+..
T Consensus 1149 g-----------~i~vwd~~~~~~~~~~~~~~~---------~~~~-~~~~~~v~~l~fs~dg~~l~s~~-----g~v~v 1202 (1249)
T 3sfz_A 1149 G-----------EIRIWNVSDGQLLHSCAPISV---------EEGT-ATHGGWVTDVCFSPDSKTLVSAG-----GYLKW 1202 (1249)
T ss_dssp S-----------CCCEEESSSSCCCCCCCCCC-----------------CCSCCCEEEECTTSSCEEEES-----SSEEE
T ss_pred C-----------EEEEEECCCCceEEEeccccc---------cccc-cccCceEEEEEECCCCCEEEECC-----CeEEE
Confidence 3 378888887664322100000 0000 01223466788999999765432 35777
Q ss_pred EECCCCcEEEecC-CCCCceeEEEeecCCEEEEE
Q 005093 362 VNVSSGELLRITP-AESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 362 ~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~ 394 (715)
+|+.+|+...... ....+....|++++..++..
T Consensus 1203 wd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A 1203 WNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp BCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEE
T ss_pred EECCCCceeeeeeccCCcccEEEECCCCCEEEEe
Confidence 7888887654433 22234446788888876653
No 311
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.05 E-value=3.2e-10 Score=123.05 Aligned_cols=131 Identities=20% Similarity=0.224 Sum_probs=90.1
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-ch--HHHH-H-HHhCCcEEEEEcCCCCC-CCc--hhhhh
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-F-LSSVGYSLLIVNYRGSL-GFG--EEALQ 530 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~-~~--~~~~-~-la~~G~~vi~~d~rG~~-~~g--~~~~~ 530 (715)
+.|.+.+ .+|.|+.....++.|+||++|||++..+... +. .++. . ..+.|++|+.+|||... ++. .....
T Consensus 94 sedcl~l--~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 171 (534)
T 1llf_A 94 SEDCLTI--NVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA 171 (534)
T ss_dssp CSCCCEE--EEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEE--EEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc
Confidence 3455444 5889976445668899999999987765443 21 1222 2 23478999999999643 111 01111
Q ss_pred cCCCCCCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhC--------CCceeEEEecCCc
Q 005093 531 SLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPL 594 (715)
Q Consensus 531 ~~~~~~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~~~ 594 (715)
. ..+...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++... +.+|+++|+.+|.
T Consensus 172 ~---~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 172 E---GSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp H---TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred c---CCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 1 12334488999999999885 247999999999999999887766643 4589999999984
No 312
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.04 E-value=1.9e-09 Score=111.95 Aligned_cols=206 Identities=11% Similarity=0.096 Sum_probs=123.0
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.+.+...+|||||++|+.....+ ...+| ..++....... ..+ .+..++|+|+++.++..+..
T Consensus 139 ~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~~---h~~------~v~~v~~s~~~~~~~~s~~~-- 202 (357)
T 4g56_B 139 DDIVKTLSVFSDGTQAVSGGKDF-----SVKVWDLSQKAVLKSYNA---HSS------EVNCVAACPGKDTIFLSCGE-- 202 (357)
T ss_dssp SSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTTEEEEEECC---CSS------CEEEEEECTTCSSCEEEEET--
T ss_pred CCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcC---CCC------CEEEEEEccCCCceeeeecc--
Confidence 35688999999999998765543 34556 34443333321 111 22789999999765554332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecCCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spdg~~~ 198 (715)
...|.+||+.+++..... .......+..++|+|++..
T Consensus 203 -----------------------------------------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~- 240 (357)
T 4g56_B 203 -----------------------------------------DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD- 240 (357)
T ss_dssp -----------------------------------------TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT-
T ss_pred -----------------------------------------CCceEEEECCCCceeeeeeeccccccccchhhhhcccc-
Confidence 256899999887754431 1223345678899999887
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-CceecCCCCccccceeEcCCCCe-EE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKF-LV 276 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~spdg~~-l~ 276 (715)
++.++. .+..|.++|+ .++ ....+......+...+|||||+. |+
T Consensus 241 ---~la~g~--------------~d~~i~~wd~-----------------~~~~~~~~~~~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 241 ---TFACGD--------------ETGNVSLVNI-----------------KNPDSAQTSAVHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp ---EEEEEE--------------SSSCEEEEES-----------------SCGGGCEEECCCSSCEEEEEECSSSSCCEE
T ss_pred ---eEEEee--------------cccceeEEEC-----------------CCCcEeEEEeccceeEEEEEEcCCCCCEEE
Confidence 776653 2236888887 433 44556666677889999999965 44
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc-CCCEEEEEeeeCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGS 355 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-dg~~l~~~~~~~~ 355 (715)
-.+.+ ..|+++|+.+++...... +...+..++|+| |++ ++++...++
T Consensus 287 sgs~D-----------~~i~iwd~~~~~~~~~~~--------------------H~~~V~~vafsP~d~~-~l~s~s~Dg 334 (357)
T 4g56_B 287 SISED-----------CTVAVLDADFSEVFRDLS--------------------HRDFVTGVAWSPLDHS-KFTTVGWDH 334 (357)
T ss_dssp EEETT-----------SCEEEECTTSCEEEEECC--------------------CSSCEEEEEECSSSTT-EEEEEETTS
T ss_pred EEeCC-----------CEEEEEECCCCcEeEECC--------------------CCCCEEEEEEeCCCCC-EEEEEcCCC
Confidence 44433 248888987754321110 112345678998 676 556666666
Q ss_pred eeEEEEEECCCCcEEEe
Q 005093 356 SQVIISVNVSSGELLRI 372 (715)
Q Consensus 356 ~~~l~~~d~~tg~~~~l 372 (715)
...+|.+.. .++...+
T Consensus 335 ~v~iW~~~~-~~~~~~~ 350 (357)
T 4g56_B 335 KVLHHHLPS-EGRTENL 350 (357)
T ss_dssp CEEEEECC---------
T ss_pred eEEEEECCC-CCccccc
Confidence 666665433 2444443
No 313
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.04 E-value=1.7e-08 Score=104.04 Aligned_cols=229 Identities=12% Similarity=0.004 Sum_probs=131.3
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
+...+...+|||||+.|+-.... ....+| ..++....+. .... +..+.|||||++|+..+.
T Consensus 75 h~~~V~~~~~~~~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h~~~----------v~~v~~sp~~~~l~s~~~- 138 (343)
T 2xzm_R 75 HNHFVSDLALSQENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGHQSE----------VYSVAFSPDNRQILSAGA- 138 (343)
T ss_dssp CSSCEEEEEECSSTTEEEEEETT-----SEEEEEETTSSCEEEEEECCCSC----------EEEEEECSSTTEEEEEET-
T ss_pred CCCceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCc----------EEEEEECCCCCEEEEEcC-
Confidence 33668899999999998865544 245566 3444333322 2222 278999999998876532
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC-CCCCCccceEEEecCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~~~~~~~~~~spdg~ 196 (715)
...|.+||+.+........ ......+..+.|+|+++
T Consensus 139 -------------------------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 139 -------------------------------------------EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp -------------------------------------------TSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCC
T ss_pred -------------------------------------------CCEEEEEeccCCceeeeecccCCCceeeeeeeccccc
Confidence 2568999987554443310 12233567889999984
Q ss_pred CCc------cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcC
Q 005093 197 GLH------QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP 270 (715)
Q Consensus 197 ~~~------~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~sp 270 (715)
... . ++.++. .+..|.++|. .......+..+...+...+|||
T Consensus 176 ~~~~~~~~~~-~l~s~~--------------~d~~i~iwd~-----------------~~~~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 176 SANKVQPFAP-YFASVG--------------WDGRLKVWNT-----------------NFQIRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp SCSCCCSSCC-EEEEEE--------------TTSEEEEEET-----------------TTEEEEEEECCSSCEEEEEECT
T ss_pred cccccCCCCC-EEEEEc--------------CCCEEEEEcC-----------------CCceeEEEcCccccceEEEECC
Confidence 200 0 333332 2235777774 4444445556666788899999
Q ss_pred CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEE
Q 005093 271 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 350 (715)
Q Consensus 271 dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~ 350 (715)
||++|+-.+.+. .|.++|+........... ....+..++|+|++..+ ..
T Consensus 224 ~g~~l~sgs~dg-----------~v~iwd~~~~~~~~~~~~-------------------~~~~v~~v~~sp~~~~l-a~ 272 (343)
T 2xzm_R 224 NGKYIATGGKDK-----------KLLIWDILNLTYPQREFD-------------------AGSTINQIAFNPKLQWV-AV 272 (343)
T ss_dssp TSSEEEEEETTC-----------EEEEEESSCCSSCSEEEE-------------------CSSCEEEEEECSSSCEE-EE
T ss_pred CCCEEEEEcCCC-----------eEEEEECCCCcccceeec-------------------CCCcEEEEEECCCCCEE-EE
Confidence 999998766552 488888743221110000 00124567899998754 33
Q ss_pred eeeCCeeEEEEEECCCCcEE---EecC-----------CCCCceeEEEeecCCEEEEE
Q 005093 351 SIWGSSQVIISVNVSSGELL---RITP-----------AESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 351 ~~~~~~~~l~~~d~~tg~~~---~l~~-----------~~~~~~~~~~s~~~~~l~~~ 394 (715)
+. ++ .+..+|+.+++.. .+.. ....+....|++++..|+..
T Consensus 273 ~~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg 327 (343)
T 2xzm_R 273 GT-DQ--GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAG 327 (343)
T ss_dssp EE-SS--CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEE
T ss_pred EC-CC--CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEe
Confidence 33 33 3555677665432 2221 11123335677887766543
No 314
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=99.04 E-value=6.4e-11 Score=129.23 Aligned_cols=130 Identities=22% Similarity=0.223 Sum_probs=89.1
Q ss_pred CCCCceEEEEEEec-----CCCCCCCC----CcEEEEEcCCCCCCCCccc-hHHHHHHHhCCcEEEEEcCCCCC-CCchh
Q 005093 459 KGAQKPFEAIFVSS-----SHKKDCSC----DPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSL-GFGEE 527 (715)
Q Consensus 459 ~~~g~~l~~~l~~P-----~~~~~~~~----~P~vv~iHGg~~~~~~~~~-~~~~~~la~~G~~vi~~d~rG~~-~~g~~ 527 (715)
+.|.+. ..+|.| ... ..++ .|+||++|||++..+.... ......|+++|++|+.+|||... ||...
T Consensus 87 ~edcL~--lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~ 163 (551)
T 2fj0_A 87 SEACIH--ANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSL 163 (551)
T ss_dssp CSCCCE--EEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCC
T ss_pred CCCCeE--EEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccC
Confidence 345544 457788 422 2233 8999999998876544322 12345677899999999999531 12111
Q ss_pred hhhcCCCCCCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCc
Q 005093 528 ALQSLPGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 594 (715)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~ 594 (715)
.. ....+...+.|+.++++|+.++. ..|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|.
T Consensus 164 ~~---~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 164 NS---TSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp SS---SSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred cc---cCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 10 11223345899999999998862 3689999999999999999988765 35689999999985
No 315
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.04 E-value=8.8e-09 Score=108.78 Aligned_cols=183 Identities=13% Similarity=0.135 Sum_probs=112.4
Q ss_pred ceEEEEEccCCc--------eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccc
Q 005093 162 PSLFVININSGE--------VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 233 (715)
Q Consensus 162 ~~l~~~~~~~g~--------~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 233 (715)
..|.+|++.++. ...+ ......+..+.|+|+|+. +++++.. +..|.++|+
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~----~l~s~~~--------------dg~i~iwd~-- 161 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITL--EGHTKRVGIVAWHPTAQN----VLLSAGC--------------DNVILVWDV-- 161 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEE--ECCSSCEEEEEECSSBTT----EEEEEET--------------TSCEEEEET--
T ss_pred CeEEEEEccCCCCccccCCceEEe--cCCCCeEEEEEECcCCCC----EEEEEcC--------------CCEEEEEEC--
Confidence 569999998763 2333 223446778999999977 7776632 236888887
Q ss_pred ccchhhhhhhhccCCCCCC-ceec--CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccc
Q 005093 234 YKSEASELELKESSSEDLP-VVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 310 (715)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~l--t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~ 310 (715)
.+++ ...+ ......+....|+|||+.|+..+.+. .|.++|+.+++....
T Consensus 162 ---------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~iwd~~~~~~~~~-- 213 (402)
T 2aq5_A 162 ---------------GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK-----------RVRVIEPRKGTVVAE-- 213 (402)
T ss_dssp ---------------TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS-----------EEEEEETTTTEEEEE--
T ss_pred ---------------CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC-----------cEEEEeCCCCceeee--
Confidence 4444 3445 45566788999999999998777542 588899877543111
Q ss_pred ceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE--EEec-CCCCCceeEEEeec
Q 005093 311 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL--LRIT-PAESNFSWSLLTLD 387 (715)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~--~~l~-~~~~~~~~~~~s~~ 387 (715)
....... ..+..+.|++|++.++..........|..+|+.+++. .... .....+....|+++
T Consensus 214 --------~~~~~~~-------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 214 --------KDRPHEG-------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp --------EECSSCS-------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred --------eccCCCC-------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 0000000 0135667999987554443223456788889877553 1222 22233455678899
Q ss_pred CCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 388 GDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 388 ~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
++.++++...- ..|.+.++.++
T Consensus 279 ~~~l~~~g~~d---g~i~i~d~~~~ 300 (402)
T 2aq5_A 279 TNIVYLCGKGD---SSIRYFEITSE 300 (402)
T ss_dssp TTEEEEEETTC---SCEEEEEECSS
T ss_pred CCEEEEEEcCC---CeEEEEEecCC
Confidence 88877665322 24666676544
No 316
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.04 E-value=1.1e-08 Score=106.47 Aligned_cols=218 Identities=13% Similarity=0.037 Sum_probs=114.3
Q ss_pred ceEEeeCCCCceE-EEEec-------C-----CCCCCeEEEEecCCccEEEEec-CccccccccCCCcccceeecCCCCe
Q 005093 45 ASAVVPSPSGSKL-LVVRN-------P-----ENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETL 110 (715)
Q Consensus 45 ~~~~~~Spdg~~l-a~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~ 110 (715)
....+|||||++| +|+.+ . .++.-.+|.+...|+....... ..... .....+.|||||++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~spdG~~ 158 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN------TGIHGMVFDPTETY 158 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTT------CCEEEEEECTTSSE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCC------CcceEEEECCCCCE
Confidence 4457899999974 45543 1 1133344544434544433321 10000 11268999999998
Q ss_pred EEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-CCceEeec--CCCC-CCcc
Q 005093 111 IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVK--GIPK-SLSV 186 (715)
Q Consensus 111 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~g~~~~l~--~~~~-~~~~ 186 (715)
|+.. .. ....|++|+++ +|+...+. ..+. ....
T Consensus 159 l~~~-~~------------------------------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 159 LYSA-DL------------------------------------------TANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp EEEE-ET------------------------------------------TTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred EEEE-cC------------------------------------------CCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 7553 22 12579999998 78765431 0111 3346
Q ss_pred ceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-------ecCCC
Q 005093 187 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-------NLTES 259 (715)
Q Consensus 187 ~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~lt~~ 259 (715)
..++|||||+. |+.... . ...|.+++++ .++++.. .+...
T Consensus 196 ~~~~~spdg~~----l~v~~~-~-------------~~~v~v~~~~---------------~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 196 RWVAMHPTGNY----LYALME-A-------------GNRICEYVID---------------PATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp EEEEECTTSSE----EEEEET-T-------------TTEEEEEEEC---------------TTTCCEEEEEEEEESSCTT
T ss_pred CEeEECCCCCE----EEEEEC-C-------------CCeEEEEEEe---------------CCCCcEEEccceEEcCCCC
Confidence 77899999997 655432 1 1234444331 0344321 11111
Q ss_pred -C--c-------ccccee-EcCCCCeEEEEecCCCCCCCCccccceeEeeecC-CCCCCCcccceeeeeeceecCCCCCc
Q 005093 260 -I--S-------SAFFPR-FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEKIVDVIPVVQCAEGDCF 327 (715)
Q Consensus 260 -~--~-------~~~~~~-~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~~~~lt~~~~~~~~~~~~~~~~~~ 327 (715)
. . ....++ |||||++|+ ++++.. . ......|.+++++ +++...+. .....
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~-v~~~~~---~-~~~~~~i~v~~~~~~g~~~~~~-------~~~~~------ 304 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMF-ASSRAN---K-FELQGYIAGFKLRDCGSIEKQL-------FLSPT------ 304 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEE-EEEEES---S-TTSCCEEEEEEECTTSCEEEEE-------EEEEC------
T ss_pred cCCcccccccccccccEEEECCCCCEEE-EECCCC---C-CCCCCeEEEEEECCCCCEEEee-------eeeec------
Confidence 0 1 356788 999999885 443321 0 0011257777765 33321110 00000
Q ss_pred cccccCCCCCCcccc---CCCEEEEEeeeCCeeEEEEEECC
Q 005093 328 PGLYSSSILSNPWLS---DGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 328 ~g~~~~~~~~~~~~~---dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
.......++|+| ||++|++.....+...+|.++.+
T Consensus 305 ---~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 305 ---PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 001345678899 89987776555566677777753
No 317
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.04 E-value=1.3e-08 Score=104.52 Aligned_cols=239 Identities=11% Similarity=0.042 Sum_probs=140.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCc----cEEEEecCccccccccCCCcccceeecCCCC-eEEEEeec
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVAEE 117 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~-~la~~~~~ 117 (715)
+.+...+|||||+.|+..... +.-.+|.+. .++ ...+...... +..+.|+|||+ .|+..+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d--~~v~iw~~~-~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l~~~~~- 77 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWD--GSLTVYKFD-IQAKNVDLLQSLRYKHP----------LLCCNFIDNTDLQIYVGTV- 77 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETT--SEEEEEEEE-TTTTEEEEEEEEECSSC----------EEEEEEEESSSEEEEEEET-
T ss_pred CcEEEEEEcCCCCEEEEEcCC--CeEEEEEeC-CCCccccceeeeecCCc----------eEEEEECCCCCcEEEEEcC-
Confidence 568999999999999877554 222333333 333 2222222222 37999999999 7877532
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc-cCCceEeecCCC--CCCccceEEEecC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI-NSGEVQAVKGIP--KSLSVGQVVWAPL 194 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~g~~~~l~~~~--~~~~~~~~~~spd 194 (715)
...|++||+ ++++...+ .. ....+..+.|+|
T Consensus 78 -------------------------------------------dg~i~~wd~~~~~~~~~~--~~~~~~~~v~~l~~~~- 111 (342)
T 1yfq_A 78 -------------------------------------------QGEILKVDLIGSPSFQAL--TNNEANLGICRICKYG- 111 (342)
T ss_dssp -------------------------------------------TSCEEEECSSSSSSEEEC--BSCCCCSCEEEEEEET-
T ss_pred -------------------------------------------CCeEEEEEeccCCceEec--cccCCCCceEEEEeCC-
Confidence 256999999 99988777 33 455678899999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC---------CCceecCCCCccccc
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED---------LPVVNLTESISSAFF 265 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~lt~~~~~~~~ 265 (715)
++. |+..+ .+..|.++|+ .+ ++..........+..
T Consensus 112 ~~~----l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (342)
T 1yfq_A 112 DDK----LIAAS---------------WDGLIEVIDP-----------------RNYGDGVIAVKNLNSNNTKVKNKIFT 155 (342)
T ss_dssp TTE----EEEEE---------------TTSEEEEECH-----------------HHHTTBCEEEEESCSSSSSSCCCEEE
T ss_pred CCE----EEEEc---------------CCCeEEEEcc-----------------cccccccccccCCeeeEEeeCCceEE
Confidence 765 55544 2236888886 22 332222224556788
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC-CCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc-C
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-D 343 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-d 343 (715)
..|+|++ |+..+.+ ..|+++|+.+ +....... . .. ....+..+.|+| +
T Consensus 156 ~~~~~~~--l~~~~~d-----------~~i~i~d~~~~~~~~~~~~-~--------~~--------~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNN-----------SQVQWFRLPLCEDDNGTIE-E--------SG--------LKYQIRDVALLPKE 205 (342)
T ss_dssp EEECSSE--EEEEEST-----------TEEEEEESSCCTTCCCEEE-E--------CS--------CSSCEEEEEECSGG
T ss_pred EEecCCc--EEEEeCC-----------CeEEEEECCccccccceee-e--------cC--------CCCceeEEEECCCC
Confidence 9999987 5544433 2588889876 33211000 0 00 011345667999 9
Q ss_pred CCEEEEEeeeCCeeEEEEEECC-----CCcEEEecCCCC---------CceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 344 GCTMLLSSIWGSSQVIISVNVS-----SGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 344 g~~l~~~~~~~~~~~l~~~d~~-----tg~~~~l~~~~~---------~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
++.+ ++....+...||.++.. ......+..... .+....|+++++.|+.... -..|.+.++
T Consensus 206 ~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~vwd~ 280 (342)
T 1yfq_A 206 QEGY-ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS----DGIISCWNL 280 (342)
T ss_dssp GCEE-EEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET----TSCEEEEET
T ss_pred CCEE-EEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC----CceEEEEcC
Confidence 8855 45555666677766654 133334433321 3444567888776654432 224667776
Q ss_pred ccc
Q 005093 410 VDK 412 (715)
Q Consensus 410 ~~~ 412 (715)
.++
T Consensus 281 ~~~ 283 (342)
T 1yfq_A 281 QTR 283 (342)
T ss_dssp TTT
T ss_pred ccH
Confidence 543
No 318
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.03 E-value=2.3e-08 Score=105.28 Aligned_cols=213 Identities=15% Similarity=0.097 Sum_probs=121.5
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
+...+|||||++||.....+ ...+| .+++....+. +..+ .+..+.|+|||++|+..+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~-----~i~iwd~~~~~~~~~~~---~h~~------~v~~~~~~p~~~~l~s~s~------ 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDR-----LIRIWDIENRKIVMILQ---GHEQ------DIYSLDYFPSGDKLVSGSG------ 185 (393)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS------CEEEEEECTTSSEEEEEET------
T ss_pred EEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEc---cCCC------CEEEEEEcCCCCEEEEecC------
Confidence 67899999999998765542 34455 3443333322 1111 2278999999998876532
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec-CCCCCccE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQY 201 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp-dg~~~~~~ 201 (715)
...|.+||+.+++.... ......+..+.|+| ||+.
T Consensus 186 --------------------------------------d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~---- 221 (393)
T 1erj_A 186 --------------------------------------DRTVRIWDLRTGQCSLT--LSIEDGVTTVAVSPGDGKY---- 221 (393)
T ss_dssp --------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEECSTTCCE----
T ss_pred --------------------------------------CCcEEEEECCCCeeEEE--EEcCCCcEEEEEECCCCCE----
Confidence 26699999998876543 22334567889999 7775
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eec-------CCCCccccceeEcCCCC
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL-------TESISSAFFPRFSPDGK 273 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l-------t~~~~~~~~~~~spdg~ 273 (715)
|+..+ .+..|.++|+ .++.. ..+ ......+...+|+|||+
T Consensus 222 l~~~s---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 222 IAAGS---------------LDRAVRVWDS-----------------ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp EEEEE---------------TTSCEEEEET-----------------TTCCEEEEEC------CCCSSCEEEEEECTTSS
T ss_pred EEEEc---------------CCCcEEEEEC-----------------CCCcEEEeecccccCCCCCCCCEEEEEECCCCC
Confidence 55443 2235677776 33332 223 33445678899999999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
.|+-.+.+. .|.++|+.+................. .+.+ +...+..++|+++++.| ++...
T Consensus 270 ~l~s~s~d~-----------~v~~wd~~~~~~~~~~~~~~~~~~~~------~~~~-h~~~v~~~~~~~~~~~l-~sgs~ 330 (393)
T 1erj_A 270 SVVSGSLDR-----------SVKLWNLQNANNKSDSKTPNSGTCEV------TYIG-HKDFVLSVATTQNDEYI-LSGSK 330 (393)
T ss_dssp EEEEEETTS-----------EEEEEEC---------------CEEE------EEEC-CSSCEEEEEECGGGCEE-EEEET
T ss_pred EEEEEeCCC-----------EEEEEECCCCCCcccccCCCCCcceE------EEec-ccCcEEEEEECCCCCEE-EEEeC
Confidence 887666542 47788876543211100000000000 0000 11134467799999855 44444
Q ss_pred CCeeEEEEEECCCCcEEEecC
Q 005093 354 GSSQVIISVNVSSGELLRITP 374 (715)
Q Consensus 354 ~~~~~l~~~d~~tg~~~~l~~ 374 (715)
++ .+..+|+.+++......
T Consensus 331 D~--~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 331 DR--GVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp TS--EEEEEETTTCCEEEEEE
T ss_pred CC--eEEEEECCCCeEEEEEC
Confidence 44 56667888887655443
No 319
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.03 E-value=1.8e-08 Score=105.51 Aligned_cols=206 Identities=10% Similarity=0.036 Sum_probs=127.6
Q ss_pred ccceEEeeCCCC-ceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecC-CCCeEEEEeecC
Q 005093 43 TGASAVVPSPSG-SKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 118 (715)
Q Consensus 43 ~~~~~~~~Spdg-~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSp-Dg~~la~~~~~~ 118 (715)
+.+...+||||| +.||.....+ ...+| .+++........ +..+ .+..+.|+| |++.|+..+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~~l~s~~~-- 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQGM-GPGD------AITGMKFNQFNTNQLFVSSI-- 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECCC-STTC------BEEEEEEETTEEEEEEEEET--
T ss_pred CCEEEEEECCCCCCEEEEEcCCC-----eEEEEeCCCcccceeeecC-CcCC------ceeEEEeCCCCCCEEEEEeC--
Confidence 668999999999 7777665542 24455 344444444321 1112 237999999 5666655422
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC-CCCccceEEEecCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEG 197 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~~~~~~~~~~spdg~~ 197 (715)
...|.+||+.++....+.... ....+..++|+||++.
T Consensus 140 ------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 177 (383)
T 3ei3_B 140 ------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQM 177 (383)
T ss_dssp ------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTE
T ss_pred ------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCE
Confidence 266999999987766663111 1245778999999997
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
|+... .+..|.++|+ .+.....+......+....|+|+|+.+++
T Consensus 178 ----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 178 ----LATGD---------------STGRLLLLGL-----------------DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp ----EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred ----EEEEC---------------CCCCEEEEEC-----------------CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 66554 3347888886 55666677777778899999999994444
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc-CCCEEEEEeeeCCe
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGSS 356 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-dg~~l~~~~~~~~~ 356 (715)
+...+ ..|.++|+.+.+.... ..... . +...+..+.|+| ||+.|+. ...++
T Consensus 222 s~~~d----------~~i~iwd~~~~~~~~~------~~~~~--~--------~~~~v~~~~~s~~~~~~l~~-~~~d~- 273 (383)
T 3ei3_B 222 TSSVD----------ATVKLWDLRNIKDKNS------YIAEM--P--------HEKPVNAAYFNPTDSTKLLT-TDQRN- 273 (383)
T ss_dssp EEETT----------SEEEEEEGGGCCSTTC------EEEEE--E--------CSSCEEEEEECTTTSCEEEE-EESSS-
T ss_pred EEeCC----------CEEEEEeCCCCCcccc------eEEEe--c--------CCCceEEEEEcCCCCCEEEE-EcCCC-
Confidence 44332 2488888876432110 00000 0 112345678999 9986654 44333
Q ss_pred eEEEEEECCCCcE
Q 005093 357 QVIISVNVSSGEL 369 (715)
Q Consensus 357 ~~l~~~d~~tg~~ 369 (715)
.|..+|+.+++.
T Consensus 274 -~i~iwd~~~~~~ 285 (383)
T 3ei3_B 274 -EIRVYSSYDWSK 285 (383)
T ss_dssp -EEEEEETTBTTS
T ss_pred -cEEEEECCCCcc
Confidence 566678776653
No 320
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.03 E-value=1.7e-08 Score=102.85 Aligned_cols=255 Identities=11% Similarity=0.130 Sum_probs=144.2
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCccc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQTV 89 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~ 89 (715)
..+..|.++++........ .....+..+...+...+|||||++|+-....+ ...+| ..++..+... ....
T Consensus 37 s~D~~v~~W~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~~h~~~- 109 (319)
T 3frx_A 37 SRDKTLISWKLTGDDQKFG-VPVRSFKGHSHIVQDCTLTADGAYALSASWDK-----TLRLWDVATGETYQRFVGHKSD- 109 (319)
T ss_dssp ETTSEEEEEEEEEETTEEE-EEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC-
T ss_pred cCCccEEEecCCCCCcccc-ccceEEeCCcccEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCCeeEEEccCCCc-
Confidence 3445566666665432110 00011223346688899999999998765543 45566 3444333322 1222
Q ss_pred cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 90 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
+..+.|+|+++.|+..+.+ ..|.+||+
T Consensus 110 ---------v~~~~~~~~~~~l~s~s~D--------------------------------------------~~i~vwd~ 136 (319)
T 3frx_A 110 ---------VMSVDIDKKASMIISGSRD--------------------------------------------KTIKVWTI 136 (319)
T ss_dssp ---------EEEEEECTTSCEEEEEETT--------------------------------------------SCEEEEET
T ss_pred ---------EEEEEEcCCCCEEEEEeCC--------------------------------------------CeEEEEEC
Confidence 2789999999988775332 56899999
Q ss_pred cCCceEeecCCCCCCccceEEEecCCCCCcc-EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCC
Q 005093 170 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ-YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 248 (715)
Q Consensus 170 ~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~-~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (715)
++.....+ ......+..+.|+|+++.... .+++++. .+..|..+|+
T Consensus 137 ~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~l~s~~--------------~d~~i~~wd~----------------- 183 (319)
T 3frx_A 137 KGQCLATL--LGHNDWVSQVRVVPNEKADDDSVTIISAG--------------NDKMVKAWNL----------------- 183 (319)
T ss_dssp TSCEEEEE--CCCSSCEEEEEECCC------CCEEEEEE--------------TTSCEEEEET-----------------
T ss_pred CCCeEEEE--eccCCcEEEEEEccCCCCCCCccEEEEEe--------------CCCEEEEEEC-----------------
Confidence 87777666 334445677889885431000 0333332 2235777786
Q ss_pred CCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCc
Q 005093 249 EDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCF 327 (715)
Q Consensus 249 ~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~ 327 (715)
...+ ...+..+...+...+|||||+.|+-.+.+. .|.++|+.+++........
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~--------------- 237 (319)
T 3frx_A 184 NQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG-----------EIMLWNLAAKKAMYTLSAQ--------------- 237 (319)
T ss_dssp TTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC-----------EEEEEETTTTEEEEEEECC---------------
T ss_pred CcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC-----------eEEEEECCCCcEEEEecCC---------------
Confidence 3333 345566667788999999999888766552 4888898775431110000
Q ss_pred cccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCC--------CCceeEEEeecCCEEEEEE
Q 005093 328 PGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAE--------SNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 328 ~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~--------~~~~~~~~s~~~~~l~~~~ 395 (715)
..+..++|+||+..++.. . .....+| +++++.... +.... .......|+++|+.|+...
T Consensus 238 -----~~v~~~~~sp~~~~la~~-~-~~~i~v~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 238 -----DEVFSLAFSPNRYWLAAA-T-ATGIKVF--SLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp -----SCEEEEEECSSSSEEEEE-E-TTEEEEE--EETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred -----CcEEEEEEcCCCCEEEEE-c-CCCcEEE--EeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 123467899999865443 3 2333444 444444332 22111 1122357888888776443
No 321
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.03 E-value=2.6e-08 Score=103.73 Aligned_cols=235 Identities=12% Similarity=0.114 Sum_probs=137.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCC--CCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~~~~~~ 120 (715)
+.+...+|||||++||..... +.-.+|.+. .+....+..+. ...+ .+..+.|+|+ ++.|+..+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d--g~i~iw~~~-~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~~~l~s~~~---- 77 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSD--KTIKIFEVE-GETHKLIDTLT-GHEG------PVWRVDWAHPKFGTILASCSY---- 77 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETT--SCEEEEEEE-TTEEEEEEEEC-CCSS------CEEEEEECCGGGCSEEEEEET----
T ss_pred ccEEEEEEcCCCCEEEEEECC--CcEEEEecC-CCcceeeeEec-CCCC------cEEEEEeCCCCCCCEEEEecc----
Confidence 678999999999999877554 333344433 22222222221 1111 2378999988 887776532
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecC--CCC
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL--NEG 197 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spd--g~~ 197 (715)
...|.+||+.+++...+. -......+..+.|+|+ ++.
T Consensus 78 ----------------------------------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 117 (379)
T 3jrp_A 78 ----------------------------------------DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL 117 (379)
T ss_dssp ----------------------------------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE
T ss_pred ----------------------------------------CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE
Confidence 256999999998632221 0334456888999999 775
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC---CceecCCCCccccceeEcC----
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP---- 270 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~~~~sp---- 270 (715)
|+... .+..|.++|+ ..+ ....+......+..+.|+|
T Consensus 118 ----l~~~~---------------~d~~i~v~d~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 118 ----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp ----EEEEE---------------TTSEEEEEEC-----------------CTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred ----EEEec---------------CCCcEEEEec-----------------CCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 55554 2336778886 333 2334445566788999999
Q ss_pred ---------CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc
Q 005093 271 ---------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 341 (715)
Q Consensus 271 ---------dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 341 (715)
|++.|+..+.+. .|+++|+.++.... ....... .+...+..+.|+
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~------~~~~~~~---------~h~~~v~~~~~s 215 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLE---------GHSDWVRDVAWS 215 (379)
T ss_dssp --------CTTCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEEC---------CCSSCEEEEEEC
T ss_pred ccccccCCCCCCEEEEEeCCC-----------eEEEEEecCCCcce------eeEEEEe---------cccCcEeEEEEC
Confidence 688887776553 47888876644210 0000000 011234567899
Q ss_pred cC---CCEEEEEeeeCCeeEEEEEECCCCc---EEEecC---CCCCceeEEEeecCCEEEEEEe
Q 005093 342 SD---GCTMLLSSIWGSSQVIISVNVSSGE---LLRITP---AESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 342 ~d---g~~l~~~~~~~~~~~l~~~d~~tg~---~~~l~~---~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
|+ ++ ++++...++...+| |+.++. ...+.. ....+....|++++..|+....
T Consensus 216 p~~~~~~-~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 216 PTVLLRS-YLASVSQDRTCIIW--TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp CCCSSSE-EEEEEETTSCEEEE--EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred CCCCCCC-eEEEEeCCCEEEEE--eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 99 55 55666656655555 555553 333322 2223444578888887665543
No 322
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=7.6e-08 Score=96.87 Aligned_cols=242 Identities=12% Similarity=0.080 Sum_probs=141.2
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
...|.|+|+++.|+++... ...++.++ .+++. .....+..+ ..+.++|||+ |++. .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~---~~~i~~~d~~~~~~-~~~~~~~~~----------~~i~~~~dG~-l~v~-~------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIP---AKKVCRWDSFTKQV-QRVTMDAPV----------SSVALRQSGG-YVAT-I------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEETTTCCE-EEEECSSCE----------EEEEEBTTSS-EEEE-E-------
T ss_pred ccCCeEECCCCEEEEEECC---CCEEEEEECCCCcE-EEEeCCCce----------EEEEECCCCC-EEEE-E-------
Confidence 3578999999999887543 34677777 44443 334433333 6899999998 4332 1
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC---CCCccceEEEecCCCCCcc
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP---KSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~~~~~~~~~~spdg~~~~~ 200 (715)
...|+++|+++++.+.+.... ......++.++|||+
T Consensus 72 -------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~---- 110 (297)
T 3g4e_A 72 -------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR---- 110 (297)
T ss_dssp -------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC----
T ss_pred -------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC----
Confidence 145899999998877663111 112356788999997
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|++......... . ........||+++. .+....+.........++|||||+.|+++..
T Consensus 111 -l~~~~~~~~~~~-~--~~~~~~~~l~~~d~------------------~g~~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 111 -YFAGTMAEETAP-A--VLERHQGALYSLFP------------------DHHVKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp -EEEEEEECCSBT-T--BCCTTCEEEEEECT------------------TSCEEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred -EEEecCCccccc-c--cccCCCcEEEEEEC------------------CCCEEEEeeccccccceEEcCCCCEEEEecC
Confidence 565543211000 0 00012347899984 3444444433344577999999999887765
Q ss_pred CCCCCCCCccccceeEeeecC--CCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 005093 281 KSSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 358 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~--~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 358 (715)
.. ..|++++++ ++.. +. ..+ +....... ..+..+++.++|+ |++..... ..
T Consensus 169 ~~----------~~i~~~~~d~~~G~~---~~--~~~--~~~~~~~~-------~~p~g~~~d~~G~-lwva~~~~--~~ 221 (297)
T 3g4e_A 169 LS----------YSVDAFDYDLQTGQI---SN--RRS--VYKLEKEE-------QIPDGMCIDAEGK-LWVACYNG--GR 221 (297)
T ss_dssp GG----------TEEEEEEECTTTCCE---EE--EEE--EEECCGGG-------CEEEEEEEBTTSC-EEEEEETT--TE
T ss_pred CC----------CcEEEEeccCCCCcc---cC--cEE--EEECCCCC-------CCCCeeEECCCCC-EEEEEcCC--CE
Confidence 42 358888864 3321 10 000 00000000 0123556788886 66655433 36
Q ss_pred EEEEECCCCcEEEecC-CCCCceeEEEe-ecCCEEEEEEeCCC
Q 005093 359 IISVNVSSGELLRITP-AESNFSWSLLT-LDGDNIIAVSSSPV 399 (715)
Q Consensus 359 l~~~d~~tg~~~~l~~-~~~~~~~~~~s-~~~~~l~~~~~~~~ 399 (715)
|+++|+++|+...... .........|. ++++.|+++.....
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 9999998887654433 32334445677 67788888776543
No 323
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.03 E-value=6.9e-09 Score=109.95 Aligned_cols=265 Identities=12% Similarity=0.086 Sum_probs=150.1
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+.+...+|||+++.|+-....+ ...+| ..++..+.... ..+ .+..+.|+|||+.|+..+.+.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~---h~~------~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDA-----TIKVWDYETGDFERTLKG---HTD------SVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSS-----CEEEEETTTCCCCEEECC---CSS------CEEEEEECTTSSEEEEEETTS
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEec---cCC------cEEEEEEcCCCCEEEEEeCCC
Confidence 345688999999999888765543 34455 44444443321 111 227899999999888776654
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
... .|....................+.|.|+ +..+ .......|.+||+.++...... ......+..+.|+|||+.
T Consensus 173 ~i~--iwd~~~~~~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 173 TIK--LWDFQGFECIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTL 248 (410)
T ss_dssp CCC--EEETTSSCEEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSE
T ss_pred eEE--EEeCCCCceeEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCE
Confidence 433 3332211111111112223334556666 3333 3334578999999988754321 223345677899999986
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCC-----
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD----- 271 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spd----- 271 (715)
|+..+ .+..|.++|+ .+++ ...+..+...+....|+|+
T Consensus 249 ----l~s~s---------------~D~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 249 ----IASCS---------------NDQTVRVWVV-----------------ATKECKAELREHRHVVECISWAPESSYSS 292 (410)
T ss_dssp ----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECCSCGGGG
T ss_pred ----EEEEc---------------CCCeEEEEEC-----------------CCCceeeEecCCCceEEEEEEcCcccccc
Confidence 55544 2235777776 4443 3455556667788899997
Q ss_pred ---------------CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCC
Q 005093 272 ---------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 336 (715)
Q Consensus 272 ---------------g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~ 336 (715)
|+.|+-.+.+ ..|.++|+.++...... .+ +...+.
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D-----------~~i~iwd~~~~~~~~~~------------------~~-h~~~v~ 342 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRD-----------KTIKMWDVSTGMCLMTL------------------VG-HDNWVR 342 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETT-----------SEEEEEETTTTEEEEEE------------------EC-CSSCEE
T ss_pred hhhhccccccccCCCCCEEEEEeCC-----------CeEEEEECCCCceEEEE------------------EC-CCCcEE
Confidence 4455544433 24888888765431100 00 111344
Q ss_pred CCccccCCCEEEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeEEEeecCCEEE
Q 005093 337 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNII 392 (715)
Q Consensus 337 ~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~~~~~l~ 392 (715)
.+.|+|+|+.| ++...++ .|..+|+.+++. ..+......+....|++++..|+
T Consensus 343 ~v~~~~~g~~l-~s~s~D~--~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 343 GVLFHSGGKFI-LSCADDK--TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp EEEECSSSSCE-EEEETTT--EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred EEEEcCCCCEE-EEEeCCC--eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE
Confidence 66799999855 4555455 455557766654 33433333344456777766554
No 324
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=99.03 E-value=1.2e-09 Score=108.41 Aligned_cols=118 Identities=15% Similarity=0.158 Sum_probs=85.0
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchh
Q 005093 464 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 542 (715)
Q Consensus 464 ~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~-~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 542 (715)
.+...++.|.. .+.+..+.||++||..... ...|. .+...|+++||.|+.+|++| +|.... ....+
T Consensus 49 ~L~~~i~~p~~-~~~~~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG---~G~~~~--------~~~~~ 115 (316)
T 3icv_A 49 VLDAGLTCQGA-SPSSVSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPP---FMLNDT--------QVNTE 115 (316)
T ss_dssp HHHHTEEETTB-BTTBCSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTT---TTCSCH--------HHHHH
T ss_pred hHhhhEeCCCC-CCCCCCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCC---CCCCcH--------HHHHH
Confidence 44555666743 2334556799999954431 13566 78889999999999999998 442211 11356
Q ss_pred hHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC---CCceeEEEecCCcch
Q 005093 543 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCN 596 (715)
Q Consensus 543 d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~~ 596 (715)
++.+.++.+.+.. ..+++.|+||||||.++.+++..+ +++++.+|+++|...
T Consensus 116 ~la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 116 YMVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 7778888887763 347899999999999998777765 589999999998764
No 325
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.03 E-value=1.5e-09 Score=113.44 Aligned_cols=198 Identities=12% Similarity=0.074 Sum_probs=106.3
Q ss_pred ceEEEEEEEeecCC-CCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCc-cEEEEecCccc
Q 005093 14 RKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ-LEKEFHVPQTV 89 (715)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~ 89 (715)
....|.++++.+.. .... .+..+.+.+...+|||||++|+.....+ . ..+| ..++ ........ ..
T Consensus 31 ~d~~i~iw~~~~~~~~~~~-----~~~~h~~~v~~~~~s~~~~~l~s~s~d~--~---v~vwd~~~~~~~~~~~~~~-~~ 99 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHAR-----TFSDHDKIVTCVDWAPKSNRIVTCSQDR--N---AYVYEKRPDGTWKQTLVLL-RL 99 (377)
T ss_dssp SSSCBCEEEEETTEEEECC-----CBCCCSSCEEEEEECTTTCCEEEEETTS--S---EEEC------CCCCEEECC-CC
T ss_pred CCCEEEEEEccCCceEEEE-----EEecCCceEEEEEEeCCCCEEEEEeCCC--e---EEEEEcCCCCceeeeeEec-cc
Confidence 34455566676542 1112 2333346789999999999998776542 2 3444 2322 11222211 11
Q ss_pred cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 90 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
.+ .+..+.|+|||+.|+..+.+ ..|.+||+
T Consensus 100 ~~------~v~~~~~~~~~~~l~~~~~d--------------------------------------------~~i~iwd~ 129 (377)
T 3dwl_C 100 NR------AATFVRWSPNEDKFAVGSGA--------------------------------------------RVISVCYF 129 (377)
T ss_dssp SS------CEEEEECCTTSSCCEEEESS--------------------------------------------SCEEECCC
T ss_pred CC------ceEEEEECCCCCEEEEEecC--------------------------------------------CeEEEEEE
Confidence 11 23799999999998876432 45888898
Q ss_pred cCCc----eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh--hh
Q 005093 170 NSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL--EL 243 (715)
Q Consensus 170 ~~g~----~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~--~~ 243 (715)
++++ ...+. ......+..++|+|||+. |+..+. +..|.++|+.... ..... ..
T Consensus 130 ~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~~~~~---------------d~~i~iwd~~~~~-~~~~~~~~~ 188 (377)
T 3dwl_C 130 EQENDWWVSKHLK-RPLRSTILSLDWHPNNVL----LAAGCA---------------DRKAYVLSAYVRD-VDAKPEASV 188 (377)
T ss_dssp -----CCCCEEEC-SSCCSCEEEEEECTTSSE----EEEEES---------------SSCEEEEEECCSS-CC-CCCSCS
T ss_pred CCcccceeeeEee-cccCCCeEEEEEcCCCCE----EEEEeC---------------CCEEEEEEEEecc-cCCCccccc
Confidence 8876 44552 114456788999999987 666541 2246666641000 00000 00
Q ss_pred hccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 244 KESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 244 ~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
.......++. ..+ .....+..+.|||||+.|+..+.+. .|.++|+.+++.
T Consensus 189 ~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----------~i~iwd~~~~~~ 239 (377)
T 3dwl_C 189 WGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----------SVTIAYPSAPEQ 239 (377)
T ss_dssp SCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----------EEC-CEECSTTS
T ss_pred cccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----------cEEEEECCCCCC
Confidence 0000001111 222 4455688899999999998777552 478888877553
No 326
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.02 E-value=2.9e-08 Score=103.20 Aligned_cols=240 Identities=10% Similarity=0.089 Sum_probs=133.4
Q ss_pred ceEEEEEEEeecCCC-CccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCcccccc
Q 005093 14 RKKFMLSTVISKENE-NSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGS 92 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (715)
....|+++|+.+... ....+. ...+.+...+|||||+.|+..... +.-.+|.+ ..++......... ...
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~-~~~~~~~~~~~~~-~~~- 97 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPDSNRIVTCGTD--RNAYVWTL-KGRTWKPTLVILR-INR- 97 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEE-----CCSSCEEEEEEETTTTEEEEEETT--SCEEEEEE-ETTEEEEEEECCC-CSS-
T ss_pred CCCEEEEEeCCCCcEEeeeeec-----CCCCcccEEEEeCCCCEEEEEcCC--CeEEEEEC-CCCeeeeeEEeec-CCC-
Confidence 445677777766531 112222 223678999999999999877654 33233333 3444333332211 111
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
.+..+.|+|||+.|+....+ ..|.+||++++
T Consensus 98 -----~v~~~~~~~~~~~l~~~~~d--------------------------------------------~~v~i~d~~~~ 128 (372)
T 1k8k_C 98 -----AARCVRWAPNEKKFAVGSGS--------------------------------------------RVISICYFEQE 128 (372)
T ss_dssp -----CEEEEEECTTSSEEEEEETT--------------------------------------------SSEEEEEEETT
T ss_pred -----ceeEEEECCCCCEEEEEeCC--------------------------------------------CEEEEEEecCC
Confidence 23789999999988876422 55888888877
Q ss_pred ce----EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchh-hhhhhhcc-
Q 005093 173 EV----QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA-SELELKES- 246 (715)
Q Consensus 173 ~~----~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~- 246 (715)
+. ..+. ......+..+.|+||++. |+... .+..|.++|+....... ........
T Consensus 129 ~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~~~d~~~~~~~~~~~~~~~~~~ 188 (372)
T 1k8k_C 129 NDWWVCKHIK-KPIRSTVLSLDWHPNSVL----LAAGS---------------CDFKCRIFSAYIKEVEERPAPTPWGSK 188 (372)
T ss_dssp TTEEEEEEEC-TTCCSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEECCCTTTSCCCCCBTTBSC
T ss_pred Ccceeeeeee-cccCCCeeEEEEcCCCCE----EEEEc---------------CCCCEEEEEcccccccccccccccccc
Confidence 62 2331 223446788999999986 66554 22356677741000000 00000000
Q ss_pred CCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCC
Q 005093 247 SSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 326 (715)
Q Consensus 247 ~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~ 326 (715)
.........+......+..+.|+|||+.|+..+.+. .|.++|+.+++..... ..
T Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~----------~~----- 242 (372)
T 1k8k_C 189 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-----------TVCLADADKKMAVATL----------AS----- 242 (372)
T ss_dssp CCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-----------EEEEEEGGGTTEEEEE----------EC-----
T ss_pred cchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-----------EEEEEECCCCceeEEE----------cc-----
Confidence 001223344445566788999999999888776542 4888888765431110 00
Q ss_pred ccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 327 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 327 ~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
....+..+.|+|+++ +++.. .++...+|.++.
T Consensus 243 ----~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ----ETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ----SSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred ----CCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 011245677999997 44444 555566766654
No 327
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.02 E-value=9.3e-08 Score=97.90 Aligned_cols=260 Identities=13% Similarity=0.085 Sum_probs=147.6
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEec-CccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
.....++|+|||+ |+++... ...++.++ .+++...+... ... +..+.|+|||+ |++......
T Consensus 45 ~~~~~~~~~~~g~-l~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~----------~~~i~~~~dg~-l~v~~~~~~- 108 (333)
T 2dg1_A 45 LQLEGLNFDRQGQ-LFLLDVF---EGNIFKINPETKEIKRPFVSHKAN----------PAAIKIHKDGR-LFVCYLGDF- 108 (333)
T ss_dssp CCEEEEEECTTSC-EEEEETT---TCEEEEECTTTCCEEEEEECSSSS----------EEEEEECTTSC-EEEEECTTS-
T ss_pred ccccCcEECCCCC-EEEEECC---CCEEEEEeCCCCcEEEEeeCCCCC----------cceEEECCCCc-EEEEeCCCC-
Confidence 3457889999998 5555332 23677776 56665555422 122 26899999997 444322110
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEee-cCCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l-~~~~~~~~~~~~~~spdg~~~~ 199 (715)
. ....|+++|+++++.+.+ ...........+.++|||+
T Consensus 109 ---------------------------------~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~--- 147 (333)
T 2dg1_A 109 ---------------------------------K-----STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG--- 147 (333)
T ss_dssp ---------------------------------S-----SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC---
T ss_pred ---------------------------------C-----CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC---
Confidence 0 125799999998887633 1111223466789999996
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~ 279 (715)
+++....... ......||+++. ++++.+.+.........++|+|||+.|++..
T Consensus 148 --l~v~~~~~~~--------~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 148 --FYFTDFRGYS--------TNPLGGVYYVSP-----------------DFRTVTPIIQNISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp --EEEEECCCBT--------TBCCEEEEEECT-----------------TSCCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred --EEEEeccccc--------cCCCceEEEEeC-----------------CCCEEEEeecCCCcccceEECCCCCEEEEEe
Confidence 6655421100 012347999986 5666666544333467789999999887765
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
... ..|+++++.+.+.. +..-..... .... ... .+..++++++|+ +++..... ..|
T Consensus 201 ~~~----------~~i~~~d~~~~g~~-~~~~~~~~~--~~~~-~~~-------~~~~i~~d~~G~-l~v~~~~~--~~v 256 (333)
T 2dg1_A 201 TTA----------NRLHRIALEDDGVT-IQPFGATIP--YYFT-GHE-------GPDSCCIDSDDN-LYVAMYGQ--GRV 256 (333)
T ss_dssp GGG----------TEEEEEEECTTSSS-EEEEEEEEE--EECC-SSS-------EEEEEEEBTTCC-EEEEEETT--TEE
T ss_pred CCC----------CeEEEEEecCCCcC-cccccceEE--EecC-CCC-------CCCceEECCCCC-EEEEEcCC--CEE
Confidence 432 35889988642211 100000000 0000 000 123467888887 65554322 478
Q ss_pred EEEECCCCcEEEecCCCC------CceeEEEeecCCEEEEEEeCCC--CCCeEEEEeec
Q 005093 360 ISVNVSSGELLRITPAES------NFSWSLLTLDGDNIIAVSSSPV--DVPQVKYGYFV 410 (715)
Q Consensus 360 ~~~d~~tg~~~~l~~~~~------~~~~~~~s~~~~~l~~~~~~~~--~p~~l~~~~~~ 410 (715)
+++|+++.....+..... ......++++++.|++...... ....||++++.
T Consensus 257 ~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 257 LVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 888986555555543321 2344567788888887766532 34467877754
No 328
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.02 E-value=2e-08 Score=105.63 Aligned_cols=254 Identities=11% Similarity=0.066 Sum_probs=136.3
Q ss_pred ceEEEEEEEeecCCCCc-cccccCCCccccccceEEeeCCC----C---ceEEEEecCCCCCCeEEEEecCCcc----EE
Q 005093 14 RKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPS----G---SKLLVVRNPENESPIQFELWSQSQL----EK 81 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spd----g---~~la~~~~~~~~~~~~~~~~~~~~~----~~ 81 (715)
....|+++++....... ..+ ...+......+...+|+|+ | +.|+..... +.-.+|.+..+... ..
T Consensus 34 ~dg~i~iw~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d--g~i~iw~~~~~~~~~~~~~~ 110 (397)
T 1sq9_A 34 GDGYLKVWDNKLLDNENPKDK-SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS--GDLLFYRITREDETKKVIFE 110 (397)
T ss_dssp TTSEEEEEESBCCTTCCGGGG-EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT--SCEEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEECCCcccccCCCc-ceEEecCCCcEEEEEEecccccCCccccEEEEEcCC--CCEEEEEccCCcccccccce
Confidence 44566676676654110 000 0112223366899999999 9 888876554 33334444333221 22
Q ss_pred EEecCccc--cccccCCCcccceeec----CCCCe-EEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCc
Q 005093 82 EFHVPQTV--HGSVYADGWFEGISWN----SDETL-IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGE 154 (715)
Q Consensus 82 ~~~~~~~~--~~~~~~~~~~~~~~wS----pDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 154 (715)
........ .+ .+..+.|+ |||+. |+..+.
T Consensus 111 ~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~l~~~~~-------------------------------------- 146 (397)
T 1sq9_A 111 KLDLLDSDMKKH------SFWALKWGASNDRLLSHRLVATDV-------------------------------------- 146 (397)
T ss_dssp EECCSCTTGGGS------CEEEEEEECCC----CEEEEEEET--------------------------------------
T ss_pred eecccccccCCC------cEEEEEEeeccCCCCceEEEEEeC--------------------------------------
Confidence 22111000 12 23799999 99998 666432
Q ss_pred ccCCccCceEEEEEccC------CceE------eecC-----CCCCCccceEEEecCCCCCccEEEEEeecCccceeeee
Q 005093 155 TYAGKRQPSLFVININS------GEVQ------AVKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 217 (715)
Q Consensus 155 ~~~~~~~~~l~~~~~~~------g~~~------~l~~-----~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~ 217 (715)
...|++||+.+ ++.. .+.+ ......+..+.|+|+| . ++...
T Consensus 147 ------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----l~~~~----------- 204 (397)
T 1sq9_A 147 ------KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L----IATGF----------- 204 (397)
T ss_dssp ------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E----EEEEC-----------
T ss_pred ------CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e----EEEEe-----------
Confidence 15588888877 4332 2210 1123457789999999 8 88765
Q ss_pred eeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCC---C---CccccceeEcCCCCeEEEEecCCCCCCCCcc
Q 005093 218 YCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE---S---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHS 290 (715)
Q Consensus 218 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~---~---~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~ 290 (715)
.+..|.++|+ .+++. ..+.. . ...+....|+|||+.|+..+.+.
T Consensus 205 ----~dg~i~i~d~-----------------~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-------- 255 (397)
T 1sq9_A 205 ----NNGTVQISEL-----------------STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-------- 255 (397)
T ss_dssp ----TTSEEEEEET-----------------TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--------
T ss_pred ----CCCcEEEEEC-----------------CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--------
Confidence 2346888887 44433 34444 3 66788999999999888666541
Q ss_pred ccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 291 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 291 ~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
....|.++|+.+++............... . ..+ .+...+..+.|+|+++.|+ +...++ .|..+|+.+++..
T Consensus 256 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~~-~---~~~--~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 256 SFGCITLYETEFGERIGSLSVPTHSSQAS-L---GEF--AHSSWVMSLSFNDSGETLC-SAGWDG--KLRFWDVKTKERI 326 (397)
T ss_dssp TEEEEEEEETTTCCEEEEECBC------------CCB--SBSSCEEEEEECSSSSEEE-EEETTS--EEEEEETTTTEEE
T ss_pred CCceEEEEECCCCcccceeccCccccccc-c---ccc--ccCCcEEEEEECCCCCEEE-EEeCCC--eEEEEEcCCCcee
Confidence 11358889987754321110000000000 0 000 0112345678999998554 444343 6677788888766
Q ss_pred EecC
Q 005093 371 RITP 374 (715)
Q Consensus 371 ~l~~ 374 (715)
....
T Consensus 327 ~~~~ 330 (397)
T 1sq9_A 327 TTLN 330 (397)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5444
No 329
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.02 E-value=4.5e-08 Score=103.30 Aligned_cols=237 Identities=12% Similarity=0.102 Sum_probs=146.4
Q ss_pred EEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 47 AVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
...||+ ..++.....+ . ..+| .+++...+..... . +.+..+.|+|||+.|+..+.
T Consensus 98 ~~~~s~--~~l~~~~~d~----~-v~lw~~~~~~~~~~~~~~~--~------~~v~~v~~s~~~~~l~~~~~-------- 154 (401)
T 4aez_A 98 LLDWSN--LNVVAVALER----N-VYVWNADSGSVSALAETDE--S------TYVASVKWSHDGSFLSVGLG-------- 154 (401)
T ss_dssp CEEECT--TSEEEEEETT----E-EEEEETTTCCEEEEEECCT--T------CCEEEEEECTTSSEEEEEET--------
T ss_pred EEeecC--CCEEEEECCC----e-EEEeeCCCCcEeEeeecCC--C------CCEEEEEECCCCCEEEEECC--------
Confidence 356665 4455554332 3 3455 5566655554321 1 12379999999999888543
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 204 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~ 204 (715)
...|.+||+++++..... ......+..+.| +++. ++
T Consensus 155 ------------------------------------dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~- 190 (401)
T 4aez_A 155 ------------------------------------NGLVDIYDVESQTKLRTM-AGHQARVGCLSW--NRHV----LS- 190 (401)
T ss_dssp ------------------------------------TSCEEEEETTTCCEEEEE-CCCSSCEEEEEE--ETTE----EE-
T ss_pred ------------------------------------CCeEEEEECcCCeEEEEe-cCCCCceEEEEE--CCCE----EE-
Confidence 256899999887754431 233445667778 4444 44
Q ss_pred EeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCC
Q 005093 205 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSV 284 (715)
Q Consensus 205 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~ 284 (715)
++. .+..|..+|+. ........+......+....|+|||+.|+..+.+.
T Consensus 191 ~~~--------------~dg~i~i~d~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-- 239 (401)
T 4aez_A 191 SGS--------------RSGAIHHHDVR---------------IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN-- 239 (401)
T ss_dssp EEE--------------TTSEEEEEETT---------------SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred EEc--------------CCCCEEEEecc---------------cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC--
Confidence 442 23468888861 02233455666677889999999999888777553
Q ss_pred CCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 285 DSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 285 ~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
.|.++|+.++....... .+...+..+.|+|++..++++........|..+|+
T Consensus 240 ---------~v~iwd~~~~~~~~~~~-------------------~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 240 ---------VVQIWDARSSIPKFTKT-------------------NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp ---------CEEEEETTCSSEEEEEC-------------------CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred ---------eEEEccCCCCCccEEec-------------------CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 48888987744311100 01124567789999887877665323457888899
Q ss_pred CCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 365 SSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 365 ~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
.+++..........+....|++++..++.+....+ ..|.+.++.+
T Consensus 292 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d--g~i~v~~~~~ 336 (401)
T 4aez_A 292 ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD--NNLSIWSYSS 336 (401)
T ss_dssp TTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT--CEEEEEEEET
T ss_pred CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC--CcEEEEecCC
Confidence 88887766555554556688888888776653332 3466666544
No 330
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=99.01 E-value=1.2e-10 Score=127.11 Aligned_cols=131 Identities=18% Similarity=0.142 Sum_probs=87.1
Q ss_pred CCCCceEEEEEEecCCCC-CCCCCcEEEEEcCCCCCCCCccc-------hHHHHHHH-hCCcEEEEEcCCCCC-CCchhh
Q 005093 459 KGAQKPFEAIFVSSSHKK-DCSCDPLIVVLHGGPHSVSLSSY-------SKSLAFLS-SVGYSLLIVNYRGSL-GFGEEA 528 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~-~~~~~P~vv~iHGg~~~~~~~~~-------~~~~~~la-~~G~~vi~~d~rG~~-~~g~~~ 528 (715)
+.|.+.+ .+|.|.... ..++.|+||++|||++..+.... ......|+ +.|++|+.+|||... ++....
T Consensus 77 sedcl~l--nv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~ 154 (579)
T 2bce_A 77 NEDCLYL--NIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTG 154 (579)
T ss_dssp CSCCCEE--EEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CCCCCEE--EEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCC
Confidence 4455555 578887542 34678999999998865433210 11123444 457999999999421 221111
Q ss_pred hhcCCCCCCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCc
Q 005093 529 LQSLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 594 (715)
Q Consensus 529 ~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~ 594 (715)
....+ +...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.. ...+|+++|+.++.
T Consensus 155 ~~~~p---gn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 155 DSNLP---GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp STTCC---CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCC---CccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 11112 222478999999999885 24799999999999999999887764 34689999998874
No 331
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=7.2e-08 Score=97.48 Aligned_cols=253 Identities=9% Similarity=0.019 Sum_probs=144.4
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
.....|+|+|||+.|+|+...+ ..++.+..+|+...+....... .++.|+|||+ |+.. +.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~---~~i~~~~~~g~~~~~~~~~~~~----------~gl~~d~dG~-l~v~-~~----- 104 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVG---RRVLGWREDGTVDVLLDATAFT----------NGNAVDAQQR-LVHC-EH----- 104 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTT---TEEEEEETTSCEEEEEESCSCE----------EEEEECTTSC-EEEE-ET-----
T ss_pred cCccCCeEeCCCCEEEEEECCC---CEEEEEeCCCCEEEEeCCCCcc----------ceeeECCCCC-EEEE-EC-----
Confidence 3456799999999998886543 3566666555544433322222 6899999998 4332 21
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC---CCccceEEEecCCCCCc
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~~~~~spdg~~~~ 199 (715)
....|++++.+ |+.+.+..... ......+.++|||+
T Consensus 105 -------------------------------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~--- 143 (305)
T 3dr2_A 105 -------------------------------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA--- 143 (305)
T ss_dssp -------------------------------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC---
T ss_pred -------------------------------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC---
Confidence 11457788876 55554421111 11345789999997
Q ss_pred cEEEEEeecCcc--ceeeeeee-ecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEE
Q 005093 200 QYLVFVGWSSET--RKLGIKYC-YNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 200 ~~i~~~~~~~~~--~~~g~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
|+++....+. ...+.... ......||++|. ++++.+.+. .......++|||||+.|+
T Consensus 144 --l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~-----------------~~g~~~~~~-~~~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 144 --IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP-----------------DGSPLQRMA-DLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp --EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS-----------------SSCCCEEEE-EESSEEEEEECTTSSEEE
T ss_pred --EEEeCcCCCccccccccccccccCCCeEEEEcC-----------------CCCcEEEEe-cCCCCcceEEcCCCCEEE
Confidence 6765210000 00000000 011247999996 677777766 444456789999999988
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
+...... ......|+++++.+++ ++... .... . .. ..+..+.+.++|+ |++.. .
T Consensus 204 v~~~~~~-----~~~~~~i~~~~~~~~~---l~~~~-~~~~---~-~~--------~~pdgi~~d~~G~-lwv~~-~--- 257 (305)
T 3dr2_A 204 VSQTPEQ-----GHGSVEITAFAWRDGA---LHDRR-HFAS---V-PD--------GLPDGFCVDRGGW-LWSSS-G--- 257 (305)
T ss_dssp EEECCC--------CCCEEEEEEEETTE---EEEEE-EEEC---C-SS--------SCCCSEEECTTSC-EEECC-S---
T ss_pred EEecCCc-----CCCCCEEEEEEecCCC---ccCCe-EEEE---C-CC--------CCCCeEEECCCCC-EEEec-C---
Confidence 7765421 0112468999887643 21110 0100 0 00 1234667888998 66554 2
Q ss_pred eEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEe
Q 005093 357 QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 408 (715)
Q Consensus 357 ~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~ 408 (715)
..|+++++++.....+..... .....|+++++.|+++..+ .|++++
T Consensus 258 ~gv~~~~~~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~ 303 (305)
T 3dr2_A 258 TGVCVFDSDGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLP 303 (305)
T ss_dssp SEEEEECTTSCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEE
T ss_pred CcEEEECCCCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEE
Confidence 249999996666666654433 3446777777788776643 566655
No 332
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=99.01 E-value=5.3e-10 Score=121.55 Aligned_cols=131 Identities=21% Similarity=0.164 Sum_probs=90.8
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHh-CCcEEEEEcCCCC-CCCchhhhhcCCCC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRGS-LGFGEEALQSLPGK 535 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la~-~G~~vi~~d~rG~-~~~g~~~~~~~~~~ 535 (715)
+.|.+.+ .+|.|... .++.|+||++|||++..+.... ......|++ .|++|+.+|||.. -||.... ..+..
T Consensus 89 ~edcl~l--nv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 162 (529)
T 1p0i_A 89 SEDCLYL--NVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--GNPEA 162 (529)
T ss_dssp CSCCCEE--EEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCTTS
T ss_pred CCcCCeE--EEeeCCCC--CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--CCCCC
Confidence 3455555 57888743 2678999999998876544322 122345655 7999999999942 1121110 00112
Q ss_pred CCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcc
Q 005093 536 VGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 595 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~ 595 (715)
.+...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 163 ~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 163 PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 2333488999999999886 247999999999999999999887753 35899999999864
No 333
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.99 E-value=1.6e-08 Score=113.08 Aligned_cols=241 Identities=10% Similarity=0.040 Sum_probs=144.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCC----ccEEEEe-cCccccccccCCCcccceeecC--CCCeEEE
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS----QLEKEFH-VPQTVHGSVYADGWFEGISWNS--DETLIAY 113 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~wSp--Dg~~la~ 113 (715)
+.+...+|||||++||+... + . ..+| .++ +....+. .... .+..+.||| ||++|+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~~---~--~-v~v~~~~~~~~~~~~~~~~~~h~~~---------~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG---K--S-AFVRCLDDGDSKVPPVVQFTGHGSS---------VVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET---T--E-EEEEECCSSCCSSCSEEEECTTTTS---------CEEEEEECSSTTCCEEEE
T ss_pred CceeEEEECCCCCEEEEecC---C--e-EEEEECCCCCCccccceEEecCCCc---------eEEEEEECcCCCCCEEEE
Confidence 66889999999999999862 2 2 3344 334 3333322 1122 037999999 9998887
Q ss_pred EeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC------ceEeecC-CCCCCcc
Q 005093 114 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG------EVQAVKG-IPKSLSV 186 (715)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g------~~~~l~~-~~~~~~~ 186 (715)
... ...|.+||+.++ +...+.. ......+
T Consensus 84 ~~~--------------------------------------------dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 84 GDE--------------------------------------------SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 119 (615)
T ss_dssp EET--------------------------------------------TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred ecC--------------------------------------------CCEEEEEeCCCCcccccccccccchhhcccccE
Confidence 532 256899999755 2222210 2234467
Q ss_pred ceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccce
Q 005093 187 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFP 266 (715)
Q Consensus 187 ~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~ 266 (715)
..+.|+|||+. |+......+ ....|+.+| .+.....+..+...+...
T Consensus 120 ~~~~~s~~~~~----l~~~~~~~~-----------~~~~v~~~d------------------~~~~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 120 SDISWDFEGRR----LCVVGEGRD-----------NFGVFISWD------------------SGNSLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEECTTSSE----EEEEECCSS-----------CSEEEEETT------------------TCCEEEECCSCSSCEEEE
T ss_pred EEEEEeCCCCE----EEEeccCCC-----------CccEEEEEE------------------CCCcceeeecCCccEEEE
Confidence 88999999998 877663211 113566666 334555666677778999
Q ss_pred eEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccC---CCCCCccccC
Q 005093 267 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS---SILSNPWLSD 343 (715)
Q Consensus 267 ~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~d 343 (715)
.|+|+|+.++++...+ ..|.++|+.+++.... +.. +.. .+..+.|+|+
T Consensus 167 ~~~~~~~~~l~~~~~d----------~~v~vwd~~~~~~~~~----------~~~---------~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDD----------GSVVFYQGPPFKFSAS----------DRT---------HHKQGSFVRDVEFSPD 217 (615)
T ss_dssp EECSSSSCEEEEEETT----------TEEEEEETTTBEEEEE----------ECS---------SSCTTCCEEEEEECST
T ss_pred EECCCCCcEEEEEeCC----------CcEEEEeCCCcceeee----------ecc---------cCCCCceEEEEEECCC
Confidence 9999998544444332 2588888766443110 000 011 2446779999
Q ss_pred -CCEEEEEeeeCCeeEEEEEECCCCcEEEec-----CCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 344 -GCTMLLSSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 344 -g~~l~~~~~~~~~~~l~~~d~~tg~~~~l~-----~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
++.++. ...++ .|..+|+.+++..... .....+....|+ ++..++....+ ..|.+.++.++
T Consensus 218 ~~~~l~~-~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~wd~~~~ 284 (615)
T 1pgu_A 218 SGEFVIT-VGSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----ATIRVWDVTTS 284 (615)
T ss_dssp TCCEEEE-EETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT----SEEEEEETTTT
T ss_pred CCCEEEE-EeCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC----CcEEEEECCCC
Confidence 875544 44333 5677788888876655 333334445667 66666554422 34556665433
No 334
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.99 E-value=2.5e-08 Score=100.81 Aligned_cols=244 Identities=11% Similarity=0.048 Sum_probs=138.7
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCcc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQT 88 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~ 88 (715)
-.....+.++|+.+... ...+.. ....+...+|+|||++|+.....+ ...+| ..++....+. ....
T Consensus 31 ~~~dg~v~lWd~~~~~~-~~~~~~-----~~~~v~~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~~~~~~~~~h~~~ 99 (304)
T 2ynn_A 31 TLYSGRVELWNYETQVE-VRSIQV-----TETPVRAGKFIARKNWIIVGSDDF-----RIRVFNYNTGEKVVDFEAHPDY 99 (304)
T ss_dssp EETTSEEEEEETTTTEE-EEEEEC-----CSSCEEEEEEEGGGTEEEEEETTS-----EEEEEETTTCCEEEEEECCSSC
T ss_pred EcCCCcEEEEECCCCce-eEEeec-----cCCcEEEEEEeCCCCEEEEECCCC-----EEEEEECCCCcEEEEEeCCCCc
Confidence 33455666666654431 122221 225578899999999998765543 34556 3444333322 1222
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
+..+.|+||++.|+-.+. ...|.+||
T Consensus 100 ----------v~~~~~~~~~~~l~sgs~--------------------------------------------D~~v~lWd 125 (304)
T 2ynn_A 100 ----------IRSIAVHPTKPYVLSGSD--------------------------------------------DLTVKLWN 125 (304)
T ss_dssp ----------EEEEEECSSSSEEEEEET--------------------------------------------TSCEEEEE
T ss_pred ----------EEEEEEcCCCCEEEEECC--------------------------------------------CCeEEEEE
Confidence 278999999998876432 25699999
Q ss_pred ccCCc-eE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhcc
Q 005093 169 INSGE-VQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 246 (715)
Q Consensus 169 ~~~g~-~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (715)
++++. .. .+ ......+..++|+|++.. ++.++. .+..|.++|+.
T Consensus 126 ~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~l~sgs--------------~D~~v~iwd~~-------------- 171 (304)
T 2ynn_A 126 WENNWALEQTF--EGHEHFVMCVAFNPKDPS----TFASGC--------------LDRTVKVWSLG-------------- 171 (304)
T ss_dssp GGGTTEEEEEE--CCCCSCEEEEEECTTCTT----EEEEEE--------------TTSEEEEEETT--------------
T ss_pred CCCCcchhhhh--cccCCcEEEEEECCCCCC----EEEEEe--------------CCCeEEEEECC--------------
Confidence 98774 32 23 233445778999995544 555542 22367777861
Q ss_pred CCCCCCceecC-CCCccccceeEcC--CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecC
Q 005093 247 SSEDLPVVNLT-ESISSAFFPRFSP--DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCA 322 (715)
Q Consensus 247 ~~~~~~~~~lt-~~~~~~~~~~~sp--dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~ 322 (715)
.......+. ..........|+| |++.|+-.+.+. .|.++|+.+++... +..
T Consensus 172 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~-----------~i~iWd~~~~~~~~~~~~------------ 226 (304)
T 2ynn_A 172 --QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL-----------TIKIWDYQTKSCVATLEG------------ 226 (304)
T ss_dssp --CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS-----------EEEEEETTTTEEEEEEEC------------
T ss_pred --CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC-----------eEEEEeCCCCccceeeCC------------
Confidence 222223333 2334456677765 777777665542 48888987654211 100
Q ss_pred CCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCE
Q 005093 323 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDN 390 (715)
Q Consensus 323 ~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~ 390 (715)
+...+..+.|+|++. ++++...++. |..+|+.+++..+..... .......++++++.
T Consensus 227 --------h~~~v~~~~~~p~~~-~l~s~s~Dg~--i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 227 --------HMSNVSFAVFHPTLP-IIISGSEDGT--LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp --------CSSCEEEEEECSSSS-EEEEEETTSC--EEEEETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred --------CCCCEEEEEECCCCC-EEEEEcCCCe--EEEEECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 111344567999998 5556655554 455588888766554332 22233345565543
No 335
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.99 E-value=3.2e-08 Score=112.60 Aligned_cols=231 Identities=13% Similarity=0.081 Sum_probs=138.4
Q ss_pred ccceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCcc
Q 005093 12 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQT 88 (715)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~ 88 (715)
-..+..|.++++...... .......+..+...+...+|||||+.|+-....+ ...+| ..++..+.+. ....
T Consensus 401 ~s~D~~i~~W~~~~~~~~-~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKA-YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp EETTSEEEEEECCCSTTC-SCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC
T ss_pred EeCCCcEEEEEccCCCcc-cccccceecCCCCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCcceeEEeCCCCC
Confidence 334556666667654321 1111112333346788999999999998765543 45566 3443333222 2222
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
+ ..+.|||||+.|+..+.+ ..|.+||
T Consensus 475 v----------~~~~~s~~~~~l~s~s~D--------------------------------------------~~i~iwd 500 (694)
T 3dm0_A 475 V----------LSVAFSLDNRQIVSASRD--------------------------------------------RTIKLWN 500 (694)
T ss_dssp E----------EEEEECTTSSCEEEEETT--------------------------------------------SCEEEEC
T ss_pred E----------EEEEEeCCCCEEEEEeCC--------------------------------------------CEEEEEE
Confidence 2 789999999998775432 5588888
Q ss_pred ccCCceEeecC--CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhcc
Q 005093 169 INSGEVQAVKG--IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 246 (715)
Q Consensus 169 ~~~g~~~~l~~--~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (715)
+.+.....+.. ......+..+.|+|++... ++.++. .+..|.++|+
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~---~l~s~s--------------~d~~v~vwd~--------------- 548 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQP---TIVSAS--------------WDKTVKVWNL--------------- 548 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSC---EEEEEE--------------TTSCEEEEET---------------
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcc---eEEEEe--------------CCCeEEEEEC---------------
Confidence 87665544420 1122346788999998420 444442 2236778887
Q ss_pred CCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCC
Q 005093 247 SSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD 325 (715)
Q Consensus 247 ~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~ 325 (715)
.++. ...+..+...+...+|||||+.|+..+.+. .|.++|+.+++.......
T Consensus 549 --~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg-----------~i~iwd~~~~~~~~~~~~-------------- 601 (694)
T 3dm0_A 549 --SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG-----------VVLLWDLAEGKKLYSLEA-------------- 601 (694)
T ss_dssp --TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----------BCEEEETTTTEEEECCBC--------------
T ss_pred --CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-----------eEEEEECCCCceEEEecC--------------
Confidence 4443 445666777889999999999888766553 478888877543111000
Q ss_pred CccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 005093 326 CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 371 (715)
Q Consensus 326 ~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 371 (715)
...+..++|+|++..+ ....+ + .|..+|+.+++...
T Consensus 602 ------~~~v~~~~~sp~~~~l-~~~~~-~--~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 602 ------NSVIHALCFSPNRYWL-CAATE-H--GIKIWDLESKSIVE 637 (694)
T ss_dssp ------SSCEEEEEECSSSSEE-EEEET-T--EEEEEETTTTEEEE
T ss_pred ------CCcEEEEEEcCCCcEE-EEEcC-C--CEEEEECCCCCChh
Confidence 0123456799998744 33332 2 37778988887654
No 336
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.98 E-value=1.3e-09 Score=106.40 Aligned_cols=192 Identities=8% Similarity=-0.010 Sum_probs=110.8
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 559 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~ 559 (715)
..|.|+++||.+.. ...|..++..|. .++.|+.+|++| ++. .++++.+.++.+ . ..
T Consensus 21 ~~~~l~~~hg~~~~--~~~~~~~~~~l~-~~~~v~~~d~~g---~~~-------------~~~~~~~~i~~~---~--~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGF--GIYFKDLALQLN-HKAAVYGFHFIE---EDS-------------RIEQYVSRITEI---Q--PE 76 (244)
T ss_dssp CSSEEEEECCTTCC--GGGGHHHHHHTT-TTSEEEEECCCC---STT-------------HHHHHHHHHHHH---C--SS
T ss_pred CCCCEEEECCCCCC--HHHHHHHHHHhC-CCceEEEEcCCC---HHH-------------HHHHHHHHHHHh---C--CC
Confidence 45679999996654 456777777775 689999999998 211 144555554433 1 23
Q ss_pred ceEEEEEeChhHHHHHHHHhhC---CCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCCh-hhH---
Q 005093 560 SKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSV-EDL--- 632 (715)
Q Consensus 560 ~~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 632 (715)
.++.++||||||.+++.++.+. ++++.+++++++...... ...... ......+. .+.. ...
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~------~~~~~~-----~~~~~~~~-~~~~~~~~~~~ 144 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS------ITADTE-----NDDSAAYL-PEAVRETVMQK 144 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC------CCCC------------CCS-CHHHHHHHTHH
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc------cccccc-----HHHHHHHh-HHHHHHHHHHH
Confidence 6799999999999999988765 577888888877542100 000000 00000000 0000 000
Q ss_pred -HHHHhcCc-hhhccCCCCcEEEEeeC--CCCcCCchHHHHHHHHHHHc-CCcEEEEEeCCCCcc-CCCCCchHHHHHHH
Q 005093 633 -TRFHSKSP-ISHISKVKTPTIFLLGA--QDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHG-IERPQSDFESFLNI 706 (715)
Q Consensus 633 -~~~~~~sp-~~~~~~i~~P~Lii~G~--~D~~v~~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~-~~~~~~~~~~~~~i 706 (715)
..+..+.. ......+++|+++++|+ .|.. +... ...+.+. ...++++.+++ +|. +...+....+.+.|
T Consensus 145 ~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~----~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i 218 (244)
T 2cb9_A 145 KRCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMV----LQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANII 218 (244)
T ss_dssp HHHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHH----TTSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCcCCCEEEEEccCccccc-cccc----hhHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHH
Confidence 00111100 01345788999999999 8873 2221 1222222 23688999997 883 33334455677788
Q ss_pred HHHHHHh
Q 005093 707 GLWFKKY 713 (715)
Q Consensus 707 ~~wl~~~ 713 (715)
.+||.+.
T Consensus 219 ~~~L~~~ 225 (244)
T 2cb9_A 219 LNILDKI 225 (244)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 8888753
No 337
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.98 E-value=7.8e-08 Score=102.68 Aligned_cols=206 Identities=11% Similarity=0.070 Sum_probs=125.6
Q ss_pred ccceEEeeCCC-CceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecC-CCCeEEEEeecC
Q 005093 43 TGASAVVPSPS-GSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 118 (715)
Q Consensus 43 ~~~~~~~~Spd-g~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSp-Dg~~la~~~~~~ 118 (715)
..+...+|+|+ ++.||.....+ ...+| ..++...+... .+..+. +..+.|+| |++.|+-.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-~gH~~~------V~~l~f~p~~~~~l~s~s~-- 185 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-IGAGGS------ITGLKFNPLNTNQFYASSM-- 185 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTS-----CEEEECSSCCSCCEEECC-CSSSCC------CCEEEECSSCTTEEEEECS--
T ss_pred CCEEEEEEeCCCCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-cCCCCC------EEEEEEeCCCCCEEEEEeC--
Confidence 45889999995 55666554432 34556 33333333322 122222 38999999 5666655422
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC-CCCCCccceEEEecCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~~~~~~~~~~spdg~~ 197 (715)
...|.+||++++..+.+.. ......+..+.|+|||+.
T Consensus 186 ------------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (435)
T 4e54_B 186 ------------------------------------------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM 223 (435)
T ss_dssp ------------------------------------------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE
T ss_pred ------------------------------------------CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE
Confidence 2568999999887666531 122334667899999986
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
|+... .+..|.++|+ .+.....+..+...+....|+|+++.++.
T Consensus 224 ----l~~g~---------------~dg~i~~wd~-----------------~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 224 ----VVTGD---------------NVGNVILLNM-----------------DGKELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp ----EEEEC---------------SSSBEEEEES-----------------SSCBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred ----EEEEe---------------CCCcEeeecc-----------------CcceeEEEecccceEEeeeecCCCceEEE
Confidence 65543 2236888887 66666667767778899999999987766
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
+...+ ..|.++|+.+..... +.... .+...+..++|+|||+.| ++...++
T Consensus 268 s~s~d----------~~v~iwd~~~~~~~~~~~~~~-----------------~h~~~v~~~~~spdg~~l-~s~~~D~- 318 (435)
T 4e54_B 268 TASVD----------QTVKIWDLRQVRGKASFLYSL-----------------PHRHPVNAACFSPDGARL-LTTDQKS- 318 (435)
T ss_dssp EEETT----------SBCCEEETTTCCSSSCCSBCC-----------------BCSSCEEECCBCTTSSEE-EEEESSS-
T ss_pred EecCc----------ceeeEEecccccccceEEEee-----------------eccccccceeECCCCCee-EEEcCCC-
Confidence 55443 237778876644321 11000 011235577899999855 4444444
Q ss_pred eEEEEEECCCCcEE
Q 005093 357 QVIISVNVSSGELL 370 (715)
Q Consensus 357 ~~l~~~d~~tg~~~ 370 (715)
.|..+|+.+++..
T Consensus 319 -~i~iwd~~~~~~~ 331 (435)
T 4e54_B 319 -EIRVYSASQWDCP 331 (435)
T ss_dssp -CEEEEESSSSSSE
T ss_pred -EEEEEECCCCccc
Confidence 4555677766543
No 338
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.98 E-value=1.2e-09 Score=109.01 Aligned_cols=102 Identities=17% Similarity=0.231 Sum_probs=78.1
Q ss_pred CCCcEEEEEcCCCCCCC---CccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 479 SCDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~---~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
++.|.||++||...... ...|....+.|+++||.|+++|++| +|.+. ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g---~g~s~----------~~~~~~~~~i~~~~~~- 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ---LDTSE----------VRGEQLLQQVEEIVAL- 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS---SSCHH----------HHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCC---CCCch----------hhHHHHHHHHHHHHHH-
Confidence 34677999999655421 2367778889999999999999998 44432 1245566666655554
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.+.+++.|+||||||.++..++.++|++++++|++++..
T Consensus 71 -~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 -SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 245789999999999999999999999999999998854
No 339
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.98 E-value=6.5e-10 Score=120.87 Aligned_cols=131 Identities=21% Similarity=0.166 Sum_probs=91.3
Q ss_pred CCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHH-hCCcEEEEEcCCCC-CCCchhhhhcCCCC
Q 005093 459 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYRGS-LGFGEEALQSLPGK 535 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la-~~G~~vi~~d~rG~-~~~g~~~~~~~~~~ 535 (715)
+.|.+.+ .+|.|... .++.|+||++|||++..+.... ......|+ +.|++|+.++||.. -||.... ..+..
T Consensus 91 sedcl~l--nv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 164 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQEA 164 (537)
T ss_dssp CSCCCEE--EEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSSS
T ss_pred CCcCCeE--EEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCCC
Confidence 3455555 57788743 3678999999999876654322 12234555 88999999999942 1121110 00112
Q ss_pred CCccchhhHHHHHHHHHHcC---CCCCceEEEEEeChhHHHHHHHHhh--CCCceeEEEecCCcc
Q 005093 536 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 595 (715)
Q Consensus 536 ~~~~~~~d~~~~i~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~~~~ 595 (715)
.+...+.|+.++++|+.++. ..|+++|.|+|+|+||.++..++.. .+.+|+++|+.+|..
T Consensus 165 ~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 165 PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 23334899999999998862 4799999999999999999888764 245899999999864
No 340
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.98 E-value=8.1e-10 Score=106.83 Aligned_cols=200 Identities=12% Similarity=0.043 Sum_probs=108.3
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.|+++||.+.. ...|..+...|.+ +.|+.+|++| ++. ...++.+.++.+. ...
T Consensus 17 ~~~l~~~hg~~~~--~~~~~~~~~~l~~--~~v~~~d~~g---~~~-------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGY--GLMYQNLSSRLPS--YKLCAFDFIE---EED-------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHCTT--EEEEEECCCC---STT-------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCCCc--hHHHHHHHHhcCC--CeEEEecCCC---HHH-------------HHHHHHHHHHHhC-----CCC
Confidence 4789999996654 4567777777754 9999999997 322 1345555555441 135
Q ss_pred eEEEEEeChhHHHHHHHHhhC---CCceeEEEecCCcchhhhhccCCCCCCceeeecc--CCCCCCCCCCCCChhhHH--
Q 005093 561 KVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY--GSKGKDSFTESPSVEDLT-- 633 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-- 633 (715)
++.++|||+||.++..++.+. ++.+++++++++....... .............+ .......+..........
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS-DLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQK 150 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC---------CCHHHHHHHTTTCSGGGSHHHHHHHHHH
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCccc-ccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHH
Confidence 799999999999999988765 3678888888765421100 00000000000000 000000000000000000
Q ss_pred --HHHhcCc-hhhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHH-cCCcEEEEEeCCCCcc-CCCCCchHHHHHHHHH
Q 005093 634 --RFHSKSP-ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE-KGVETKVIVFPNDVHG-IERPQSDFESFLNIGL 708 (715)
Q Consensus 634 --~~~~~sp-~~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~-~~~~~~~~~~~~~i~~ 708 (715)
.+..... .....++++|+++++|++|..++.. .. .+.+ ....++++.+++ +|. +...+....+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~----~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~ 224 (230)
T 1jmk_C 151 THAFYSYYVNLISTGQVKADIDLLTSGADFDIPEW-LA----SWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLE 224 (230)
T ss_dssp HHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTT-EE----CSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccccccccEEEEEeCCCCCCccc-cc----hHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHHHH
Confidence 0000000 0134578899999999999988622 11 1222 233578999997 882 3223334455566666
Q ss_pred HHHH
Q 005093 709 WFKK 712 (715)
Q Consensus 709 wl~~ 712 (715)
|+.+
T Consensus 225 ~l~~ 228 (230)
T 1jmk_C 225 FLNT 228 (230)
T ss_dssp HHTC
T ss_pred HHhh
Confidence 6643
No 341
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.97 E-value=4.1e-10 Score=119.43 Aligned_cols=113 Identities=9% Similarity=-0.009 Sum_probs=80.9
Q ss_pred CCCCcEEEEEcCCCCCCCCccchH-HHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
+...|+||++||.+... ...|.. ++..|.+ .||.|+++|+|| +|.+.......+. ....+|+.+++++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G---~G~S~~~~~~~~~-~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRR---GSRTEYTQASYNT-RVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHH---HHSSCHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechh---cccCchhHhHhhH-HHHHHHHHHHHHHHHHhc
Confidence 34578999999976543 245665 5566665 499999999998 4433211000000 112467778888887553
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.++.+++.|+|||+||.+|+.++.++|++++++++++|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 4567899999999999999999999999999999988754
No 342
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.97 E-value=1.2e-07 Score=95.44 Aligned_cols=236 Identities=13% Similarity=0.143 Sum_probs=130.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEec-CCccEEEEecCccccccccCCCcccceeecCC--CCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~~~~~ 119 (715)
+.+...+|||||++||-.... +.-.+|.+.. .++....+. +..+ .+..+.|+|+ |+.|+-.+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D--~~v~iw~~~~~~~~~~~~l~---gH~~------~V~~v~~s~~~~g~~l~s~s~--- 75 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSD--KTIKIFEVEGETHKLIDTLT---GHEG------PVWRVDWAHPKFGTILASCSY--- 75 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEEBCSSCBCCCEEEC---CCSS------CEEEEEECCGGGCSEEEEEET---
T ss_pred CceEEEEECCCCCEEEEEeCC--CEEEEEecCCCCcEEEEEEc---cccC------CeEEEEecCCCcCCEEEEEcC---
Confidence 568889999999999876554 3223333321 122222221 1111 2378999874 777766532
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecC--CC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL--NE 196 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spd--g~ 196 (715)
...|.+||+++++...+. -......+..++|+|+ |+
T Consensus 76 -----------------------------------------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~ 114 (297)
T 2pm7_B 76 -----------------------------------------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP 114 (297)
T ss_dssp -----------------------------------------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS
T ss_pred -----------------------------------------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc
Confidence 266999999887532220 0223346778999998 66
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-C--ceecCCCCccccceeEcCC--
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-P--VVNLTESISSAFFPRFSPD-- 271 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~lt~~~~~~~~~~~spd-- 271 (715)
. |+..+ .+..|.++|+ ..+ . ...+......+...+|+|+
T Consensus 115 ~----l~s~s---------------~d~~v~~wd~-----------------~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 115 M----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp E----EEEEE---------------TTSEEEEEEB-----------------CSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred E----EEEEE---------------CCCcEEEEEe-----------------cCCCceeeeeeecccCccceEeecCCcc
Confidence 5 55443 2235777776 322 1 2344455566788999997
Q ss_pred -----------CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcc
Q 005093 272 -----------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 272 -----------g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 340 (715)
++.|+-.+.+. .|.++|+.++.... ..... +.+ +...+..++|
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~-----------~v~lwd~~~~~~~~------~~~~~--------l~~-H~~~V~~v~~ 212 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLEST--------LEG-HSDWVRDVAW 212 (297)
T ss_dssp -----------CCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEE--------ECC-CSSCEEEEEE
T ss_pred cccccCCCCCCcceEEEEcCCC-----------cEEEEEEcCCCceE------EEEEE--------ecC-CCCceEEEEE
Confidence 45666555442 37777776543210 00000 000 1123557789
Q ss_pred ccCC--CEEEEEeeeCCeeEEEEEECCCCc-EEEecC---CCCCceeEEEeecCCEEEEEE
Q 005093 341 LSDG--CTMLLSSIWGSSQVIISVNVSSGE-LLRITP---AESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 341 ~~dg--~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~---~~~~~~~~~~s~~~~~l~~~~ 395 (715)
+|++ ..++++...++..+||.++...+. ...+.. ....+....|+++++.|+...
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 9986 356677777777777765432222 222221 112234457888887665443
No 343
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.96 E-value=7.5e-08 Score=105.54 Aligned_cols=236 Identities=7% Similarity=-0.031 Sum_probs=138.1
Q ss_pred eeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccC
Q 005093 49 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 127 (715)
Q Consensus 49 ~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~ 127 (715)
++||+|+. |+.+.. ...+..++ ..++....+...... ..+.|||||++|+....
T Consensus 144 ~~~p~~~~--~vs~~~--d~~V~v~D~~t~~~~~~i~~g~~~----------~~v~~spdg~~l~v~~~----------- 198 (543)
T 1nir_A 144 DLDLPNLF--SVTLRD--AGQIALVDGDSKKIVKVIDTGYAV----------HISRMSASGRYLLVIGR----------- 198 (543)
T ss_dssp CCCGGGEE--EEEEGG--GTEEEEEETTTCCEEEEEECSTTE----------EEEEECTTSCEEEEEET-----------
T ss_pred ccCCCCEE--EEEEcC--CCeEEEEECCCceEEEEEecCccc----------ceEEECCCCCEEEEECC-----------
Confidence 58898843 344432 22455555 556655554432223 57899999998877532
Q ss_pred CCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc--cCCceEeecCCCCCCccceEEEec----CCCCCccE
Q 005093 128 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAP----LNEGLHQY 201 (715)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~~g~~~~l~~~~~~~~~~~~~~sp----dg~~~~~~ 201 (715)
...|.+||+ ++++...- .........++||| ||+.
T Consensus 199 ---------------------------------d~~V~v~D~~~~t~~~~~~--i~~g~~p~~va~sp~~~~dg~~---- 239 (543)
T 1nir_A 199 ---------------------------------DARIDMIDLWAKEPTKVAE--IKIGIEARSVESSKFKGYEDRY---- 239 (543)
T ss_dssp ---------------------------------TSEEEEEETTSSSCEEEEE--EECCSEEEEEEECCSTTCTTTE----
T ss_pred ---------------------------------CCeEEEEECcCCCCcEEEE--EecCCCcceEEeCCCcCCCCCE----
Confidence 156999999 77765432 22334567889999 9996
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCcee-cCCC-----------CccccceeEc
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTES-----------ISSAFFPRFS 269 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lt~~-----------~~~~~~~~~s 269 (715)
++... . ....|.++|. .+++... +... ........+|
T Consensus 240 l~v~~-~-------------~~~~v~v~D~-----------------~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 240 TIAGA-Y-------------WPPQFAIMDG-----------------ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEEEE-E-------------ESSEEEEEET-----------------TTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EEEEE-c-------------cCCeEEEEec-----------------cccccceeecccCcccCccccccCCceEEEEEC
Confidence 54443 1 1236778886 5554332 2211 1135678899
Q ss_pred CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEE
Q 005093 270 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 349 (715)
Q Consensus 270 pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~ 349 (715)
||++.+++....+ ..|+++|..+.+...++. ++ . +. .+..+.|+|||++++.
T Consensus 289 ~~~~~~~vs~~~~----------g~i~vvd~~~~~~l~~~~-----i~---~---~~-------~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 289 HEHPEFIVNVKET----------GKVLLVNYKDIDNLTVTS-----IG---A---AP-------FLHDGGWDSSHRYFMT 340 (543)
T ss_dssp SSSSEEEEEETTT----------TEEEEEECTTSSSCEEEE-----EE---C---CS-------SCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEECCC----------CeEEEEEecCCCcceeEE-----ec---c---Cc-------CccCceECCCCCEEEE
Confidence 9999876655432 369999987754321110 00 0 11 2456789999997766
Q ss_pred EeeeCCeeEEEEEECCCCcEEEecCCC-CCc--eeE-EEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 350 SSIWGSSQVIISVNVSSGELLRITPAE-SNF--SWS-LLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 350 ~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~--~~~-~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
.....+ .|..+|++++++....... ..+ ... .++++++.++++.+.. -..|.+++..+
T Consensus 341 a~~~~~--~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSN--KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLIGTDP 402 (543)
T ss_dssp EEGGGT--EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EecCCC--eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEEEeCC
Confidence 554333 5666899999887654421 111 112 2456667766554322 23466777654
No 344
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=1.6e-07 Score=95.91 Aligned_cols=236 Identities=14% Similarity=0.091 Sum_probs=135.4
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
...|+|+||++.|+++... ..+++.++ .+++.. .+..+..+ ..+.|+|||+.++.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~---~~~i~~~d~~~~~~~-~~~~~~~v----------~~i~~~~dg~l~v~~--~------ 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL---ERELHELHLASGRKT-VHALPFMG----------SALAKISDSKQLIAS--D------ 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG---GTEEEEEETTTTEEE-EEECSSCE----------EEEEEEETTEEEEEE--T------
T ss_pred CcCCeEeCCCCEEEEEECC---CCEEEEEECCCCcEE-EEECCCcc----------eEEEEeCCCeEEEEE--C------
Confidence 3678999999999888543 23688777 555443 33333332 688999999754432 1
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC---CCccceEEEecCCCCCcc
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~~~~~spdg~~~~~ 200 (715)
..|+++|+++++.+.+..... ......+.++|||+
T Consensus 109 --------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 146 (326)
T 2ghs_A 109 --------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA---- 146 (326)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC----
T ss_pred --------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC----
Confidence 238999999998776631111 12356788999997
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEec
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
+++....... ......||+++ + ++.+.+.........++|||||+.|++...
T Consensus 147 -l~v~~~~~~~--------~~~~~~l~~~~-~------------------g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 147 -LWIGTMGRKA--------ETGAGSIYHVA-K------------------GKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -EEEEEEETTC--------CTTCEEEEEEE-T------------------TEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -EEEEeCCCcC--------CCCceEEEEEe-C------------------CcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 5554421100 01224688886 2 333444332233567899999999988764
Q ss_pred CCCCCCCCccccceeEeeecC--CC-CCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 281 KSSVDSGAHSATDSLHRIDWP--TN-GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~--~~-~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
.. ..|+++++. ++ .... . ..... ...... .+..+.+.++|+ +++..... .
T Consensus 199 ~~----------~~I~~~d~~~~~Gl~~~~---~-~~~~~---~~~~~~-------~p~gi~~d~~G~-lwva~~~~--~ 251 (326)
T 2ghs_A 199 KV----------NRLMRVPLDARTGLPTGK---A-EVFID---STGIKG-------GMDGSVCDAEGH-IWNARWGE--G 251 (326)
T ss_dssp TT----------CEEEEEEBCTTTCCBSSC---C-EEEEE---CTTSSS-------EEEEEEECTTSC-EEEEEETT--T
T ss_pred CC----------CEEEEEEcccccCCcccC---c-eEEEE---CCCCCC-------CCCeeEECCCCC-EEEEEeCC--C
Confidence 42 368999875 33 2110 0 00000 000000 123456778886 55554322 3
Q ss_pred EEEEEECCCCcEEEecCCCCCceeEEEe-ecCCEEEEEEeCCC
Q 005093 358 VIISVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSSSPV 399 (715)
Q Consensus 358 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s-~~~~~l~~~~~~~~ 399 (715)
.|+++|+.+.....+...........|+ ++++.|+++.....
T Consensus 252 ~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 252 AVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 7889998544445554433333445666 67778877765544
No 345
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.95 E-value=3.7e-08 Score=120.07 Aligned_cols=241 Identities=13% Similarity=0.144 Sum_probs=146.7
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+.+...+|||||++||.....+ ...+| .+++...... +..+ .+..++|||||++|+..+.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~-----~i~vw~~~~~~~~~~~~---~h~~------~v~~~~~s~~~~~l~s~~~-- 677 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADK-----TLQVFKAETGEKLLDIK---AHED------EVLCCAFSSDDSYIATCSA-- 677 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CCSS------CEEEEEECTTSSEEEEEET--
T ss_pred ccccEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCCEEEEec---cCCC------CEEEEEEecCCCEEEEEeC--
Confidence 346789999999999998775542 34455 3444333222 1111 2379999999998887532
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
...|.+||+.+++..... ......+..+.|+|+++..
T Consensus 678 ------------------------------------------d~~v~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 678 ------------------------------------------DKKVKIWDSATGKLVHTY-DEHSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp ------------------------------------------TSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSCC
T ss_pred ------------------------------------------CCeEEEEECCCCceEEEE-cCCCCcEEEEEEecCCCce
Confidence 256999999988755431 2334467789999986651
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~ 277 (715)
++.++. .+..|.++|+ .++. ...+..+...+....|+|||+.|+.
T Consensus 715 ---~l~sg~--------------~d~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 715 ---LLATGS--------------NDFFLKLWDL-----------------NQKECRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp ---EEEEEE--------------TTSCEEEEET-----------------TSSSEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred ---EEEEEe--------------CCCeEEEEEC-----------------CCcchhheecCCCCCEEEEEEecCCCEEEE
Confidence 333332 2236888887 4444 4456666777899999999998887
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
.+.+. .|.++|+.++......... ..... ....+......+..+.|+|||+.++..+ ..
T Consensus 761 ~s~dg-----------~v~vwd~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~v~~~~~s~dg~~l~~~~----~~ 819 (1249)
T 3sfz_A 761 CSADG-----------TLRLWDVRSANERKSINVK----RFFLS--SEDPPEDVEVIVKCCSWSADGDKIIVAA----KN 819 (1249)
T ss_dssp EESSS-----------EEEEEEGGGTEEEEEEECC----CCC----------CCCCCBCCCCBCTTSSEEEEEE----TT
T ss_pred EECCC-----------eEEEEeCCCCcccceeccc----ccccc--cCCccccccceEEEEEECCCCCEEEEEc----CC
Confidence 76552 4788887765431100000 00000 0000000112356788999999776654 24
Q ss_pred EEEEEECCCCcEEEecC--CCCCceeEEEeecCCEEEEEE
Q 005093 358 VIISVNVSSGELLRITP--AESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 358 ~l~~~d~~tg~~~~l~~--~~~~~~~~~~s~~~~~l~~~~ 395 (715)
.+..+|+.++....... ....+....|++++..++...
T Consensus 820 ~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 859 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL 859 (1249)
T ss_dssp EEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEEC
T ss_pred cEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEe
Confidence 67778988877655432 223445567888887666543
No 346
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.95 E-value=2.1e-09 Score=108.76 Aligned_cols=105 Identities=19% Similarity=0.275 Sum_probs=79.3
Q ss_pred CCCcEEEEEcCCCCCCCC----ccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHc
Q 005093 479 SCDPLIVVLHGGPHSVSL----SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 554 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~----~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 554 (715)
++.|.||++||....... ..|....+.|+++||.|+++|++| +|.+.. .....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g---~g~s~~-------~~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSG---FQSDDG-------PNGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCS---SCCSSS-------TTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCC---CCCCCC-------CCCCHHHHHHHHHHHHHH
Confidence 346779999996544311 467778899999999999999998 443311 012356666666666554
Q ss_pred CCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 555 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 555 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.+.+++.|+||||||.++..++.++|++++++|++++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 245789999999999999999999999999999999864
No 347
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.94 E-value=6.1e-08 Score=103.32 Aligned_cols=168 Identities=18% Similarity=0.132 Sum_probs=99.9
Q ss_pred ceEEEEEccCCce--------EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccc
Q 005093 162 PSLFVININSGEV--------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 233 (715)
Q Consensus 162 ~~l~~~~~~~g~~--------~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 233 (715)
..|.+|++.++.. ..+ ......+..++|+|++.. +++++. ....|.++|+
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~l~s~~--------------~dg~i~i~d~-- 261 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIF--TGHTAVVEDVAWHLLHES----LFGSVA--------------DDQKLMIWDT-- 261 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEE--CCCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEET--
T ss_pred CeEEEEeCCCCCCCCceeccceee--cCCCCCEeeeEEeCCCCC----EEEEEe--------------CCCeEEEEEC--
Confidence 5689999977321 222 233446778999997777 666653 2246888887
Q ss_pred ccchhhhhhhhccCCCCC----CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcc
Q 005093 234 YKSEASELELKESSSEDL----PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 309 (715)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~----~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt 309 (715)
..+ ....+......+...+|+|+|+.++.+...+ ..|.++|+.+.+....+
T Consensus 262 ---------------~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d----------g~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 262 ---------------RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD----------KTVALWDLRNLKLKLHS 316 (430)
T ss_dssp ---------------TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SEEEEEETTCTTSCSEE
T ss_pred ---------------CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC----------CeEEEEeCCCCCCCeEE
Confidence 332 3334445566788999999999766665443 24888898763321100
Q ss_pred cceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC-C-------------cEEEecC-
Q 005093 310 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS-G-------------ELLRITP- 374 (715)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t-g-------------~~~~l~~- 374 (715)
.. .+...+..+.|+|+++.++++...++...|| |+.+ + +......
T Consensus 317 ~~------------------~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (430)
T 2xyi_A 317 FE------------------SHKDEIFQVQWSPHNETILASSGTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGG 376 (430)
T ss_dssp EE------------------CCSSCEEEEEECSSCTTEEEEEETTSCCEEE--EGGGTTCCCCHHHHHHCCTTEEEECCC
T ss_pred ee------------------cCCCCEEEEEECCCCCCEEEEEeCCCcEEEE--eCCCCccccCccccccCCcceEEEcCC
Confidence 00 0112345678999998788877766655555 5544 1 2222222
Q ss_pred CCCCceeEEEeecCCEEEEEEe
Q 005093 375 AESNFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 375 ~~~~~~~~~~s~~~~~l~~~~~ 396 (715)
....+....|++++.+++++.+
T Consensus 377 h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 377 HTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp CSSCEEEEEECSSSTTEEEEEE
T ss_pred CCCCceEEEECCCCCCEEEEEE
Confidence 2223444577787775555544
No 348
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.94 E-value=6.6e-10 Score=117.85 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=80.2
Q ss_pred CCCCcEEEEEcCCCCCCCCccchH-HHHHHHhC-CcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la~~-G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
+...|+||++||.+... ...|.. ++..|+++ ||.|+++|++| +|.+.......+. ....+|+.+++++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g---~G~S~~~~~~~~~-~~~~~dl~~~i~~L~~~~ 141 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSS---GAKAEYTQAVQNI-RIVGAETAYLIQQLLTEL 141 (452)
T ss_dssp CTTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHH---HHTSCHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEeccc---ccccccHHHHHhH-HHHHHHHHHHHHHHHHhc
Confidence 34578999999966542 245655 56667654 99999999998 4433211000000 112457777888887543
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.++.+++.|+|||+||.+|..++.++|++++++++++|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 142 SYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 3557899999999999999999999999999999998764
No 349
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.94 E-value=7.4e-09 Score=109.72 Aligned_cols=263 Identities=10% Similarity=0.039 Sum_probs=143.7
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (715)
....|.++|+.++.. ... +..+.+.+...+|||||+.|+-.... +.-.+|.+ .+++..+. +. +...
T Consensus 128 ~Dg~i~vwd~~~~~~-~~~-----l~~h~~~V~~v~~~~~~~~l~sgs~D--~~i~iwd~-~~~~~~~~--~~-~h~~-- 193 (410)
T 1vyh_C 128 EDATIKVWDYETGDF-ERT-----LKGHTDSVQDISFDHSGKLLASCSAD--MTIKLWDF-QGFECIRT--MH-GHDH-- 193 (410)
T ss_dssp SSSCEEEEETTTCCC-CEE-----ECCCSSCEEEEEECTTSSEEEEEETT--SCCCEEET-TSSCEEEC--CC-CCSS--
T ss_pred CCCeEEEEECCCCcE-EEE-----EeccCCcEEEEEEcCCCCEEEEEeCC--CeEEEEeC-CCCceeEE--Ec-CCCC--
Confidence 334566666655432 122 22233678999999999988766544 33233322 33332221 11 1111
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCC
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSG 172 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g 172 (715)
.+..+.|+|||+.|+..+.+... ..|................+...+.+.++ |..+ .......|.+||+.++
T Consensus 194 ----~V~~v~~~p~~~~l~s~s~D~~i--~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 194 ----NVSSVSIMPNGDHIVSASRDKTI--KMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp ----CEEEEEECSSSSEEEEEETTSEE--EEEETTTCCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTC
T ss_pred ----CEEEEEEeCCCCEEEEEeCCCeE--EEEECCCCcEEEEEeCCCccEEEEEECCC-CCEEEEEcCCCeEEEEECCCC
Confidence 23789999999988776654322 12222111111111112223333444554 3323 2223478999999888
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCc---------------cEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLH---------------QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~---------------~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
+..... ......+..+.|+|++.... +.++.++. .+..|.++|+
T Consensus 267 ~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs--------------~D~~i~iwd~------ 325 (410)
T 1vyh_C 267 ECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--------------RDKTIKMWDV------ 325 (410)
T ss_dssp CEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--------------TTSEEEEEET------
T ss_pred ceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--------------CCCeEEEEEC------
Confidence 755431 23344577889999742100 00333331 3346888887
Q ss_pred hhhhhhhccCCCCC-CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeee
Q 005093 238 ASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDV 315 (715)
Q Consensus 238 ~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~ 315 (715)
.++ ....+..+...+....|+|+|++|+-.+.+ ..|.++|+.+++... +..
T Consensus 326 -----------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----------~~i~vwd~~~~~~~~~~~~----- 378 (410)
T 1vyh_C 326 -----------STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD-----------KTLRVWDYKNKRCMKTLNA----- 378 (410)
T ss_dssp -----------TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETT-----------TEEEEECCTTSCCCEEEEC-----
T ss_pred -----------CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCceEEEEcC-----
Confidence 444 345566666778889999999998766544 258888887654311 110
Q ss_pred eeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 005093 316 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 361 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~ 361 (715)
+...+..+.|+|++.. +++...++..++|.
T Consensus 379 ---------------h~~~v~~l~~~~~~~~-l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 379 ---------------HEHFVTSLDFHKTAPY-VVTGSVDQTVKVWE 408 (410)
T ss_dssp ---------------CSSCEEEEEECSSSSC-EEEEETTSEEEEEC
T ss_pred ---------------CCCcEEEEEEcCCCCE-EEEEeCCCcEEEEe
Confidence 1123456789999984 45666666666663
No 350
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.93 E-value=2.2e-09 Score=117.91 Aligned_cols=118 Identities=16% Similarity=0.137 Sum_probs=81.0
Q ss_pred CCCCcEEEEEcCCCCCCCCccc-hHHHHHHH-hCCcEEEEEcCCC-CCCCchhhh---h-cCCCCCCccchhhHHHHHHH
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYRG-SLGFGEEAL---Q-SLPGKVGSQDVNDVLTAIDH 550 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~-~~~~~~la-~~G~~vi~~d~rG-~~~~g~~~~---~-~~~~~~~~~~~~d~~~~i~~ 550 (715)
.++.|+||++|||++..+.... ......|+ +.|++|+.+|||. .-||..... . ......+...+.|+.++++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4678999999999876654321 11234455 4799999999993 222221100 0 00111233348899999999
Q ss_pred HHHcC---CCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcc
Q 005093 551 VIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 595 (715)
Q Consensus 551 l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~ 595 (715)
+.++. ..|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 99873 36899999999999999988777642 35899999998853
No 351
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.93 E-value=1.2e-07 Score=98.08 Aligned_cols=152 Identities=13% Similarity=0.098 Sum_probs=91.3
Q ss_pred ccceEEeeCCC---CceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCC----CCeEEEEe
Q 005093 43 TGASAVVPSPS---GSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD----ETLIAYVA 115 (715)
Q Consensus 43 ~~~~~~~~Spd---g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD----g~~la~~~ 115 (715)
+.+...+|||+ +..++++...+ +.-.+|.+..++....+.......+ ++.+..+.|+|+ |+.|+...
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGS-NRVTLYECHSQGEIRLLQSYVDADA-----DENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEET-TEEEEEEECGGGCEEEEEEEECSCT-----TCCEEEEEEEECTTTCCEEEEEEE
T ss_pred CceEEEEEecccCCCCceEEEECCC-CEEEEEEcCCCcEEEeeeeccccCC-----CCcEEEEEeccCCCCCCCEEEEec
Confidence 56889999985 66665555443 2222332222333333322221111 122378999999 44555542
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec-C
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-L 194 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp-d 194 (715)
. ...|.+||+.+++..... ......+..+.|+| +
T Consensus 93 ~--------------------------------------------dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~ 127 (366)
T 3k26_A 93 S--------------------------------------------RGIIRIINPITMQCIKHY-VGHGNAINELKFHPRD 127 (366)
T ss_dssp T--------------------------------------------TCEEEEECTTTCCEEEEE-ESCCSCEEEEEECSSC
T ss_pred C--------------------------------------------CCEEEEEEchhceEeeee-cCCCCcEEEEEECCCC
Confidence 2 267999999888765431 23345678899999 6
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eec---CCCCccccceeEcC
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL---TESISSAFFPRFSP 270 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l---t~~~~~~~~~~~sp 270 (715)
++. |+..+ .+..|.++|+ .+++. ..+ ......+....|+|
T Consensus 128 ~~~----l~s~~---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 128 PNL----LLSVS---------------KDHALRLWNI-----------------QTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TTE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CCE----EEEEe---------------CCCeEEEEEe-----------------ecCeEEEEecccccccCceeEEEECC
Confidence 665 54443 2236888887 44443 333 45566789999999
Q ss_pred CCCeEEEEecC
Q 005093 271 DGKFLVFLSAK 281 (715)
Q Consensus 271 dg~~l~~~~~~ 281 (715)
||+.|+..+.+
T Consensus 172 ~~~~l~~~~~d 182 (366)
T 3k26_A 172 LGEKIMSCGMD 182 (366)
T ss_dssp TSSEEEEEETT
T ss_pred CCCEEEEecCC
Confidence 99988877655
No 352
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.93 E-value=2.3e-09 Score=108.75 Aligned_cols=121 Identities=18% Similarity=0.147 Sum_probs=85.9
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCC--------CCccc----hHHHHHHHhCCcE---EEEEcCCCCCCCchhhhh
Q 005093 466 EAIFVSSSHKKDCSCDPLIVVLHGGPHSV--------SLSSY----SKSLAFLSSVGYS---LLIVNYRGSLGFGEEALQ 530 (715)
Q Consensus 466 ~~~l~~P~~~~~~~~~P~vv~iHGg~~~~--------~~~~~----~~~~~~la~~G~~---vi~~d~rG~~~~g~~~~~ 530 (715)
.|....|. .. ..+.||++||..... ....| ..++..|+++||. |+++|++| +|.+...
T Consensus 29 gG~~~~p~---~~-~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g---~G~S~~~ 101 (342)
T 2x5x_A 29 GGFGGGSC---TA-TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLS---SSEQGSA 101 (342)
T ss_dssp CEEECCSS---CC-CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSC---HHHHTCG
T ss_pred CcccCCCC---CC-CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCC---CCccCCc
Confidence 44555554 22 334489999965531 13456 6788899999998 99999998 5543211
Q ss_pred cCCCCCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhC--CCceeEEEecCCcch
Q 005093 531 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 596 (715)
Q Consensus 531 ~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~~~~~ 596 (715)
.. ........+++.++++.+.+.. ..+++.|+||||||.++..++.++ |++++++|+++|...
T Consensus 102 ~~-~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 102 QY-NYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp GG-CCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred cc-cCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 10 1112234678888888887763 347899999999999999999988 899999999998654
No 353
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.92 E-value=9.7e-08 Score=98.42 Aligned_cols=226 Identities=10% Similarity=0.074 Sum_probs=120.0
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.+.+...+|||||++||..... +.-.+|.+..+.....+..+ ..... .+..+.|+|||+.|+..+.+
T Consensus 105 ~~~v~~v~~sp~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~~~-~~h~~------~v~~~~~~p~~~~l~s~s~d---- 171 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLATCSRD--KSVWVWEVDEEDEYECVSVL-NSHTQ------DVKHVVWHPSQELLASASYD---- 171 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETT--SCEEEEEECTTSCEEEEEEE-CCCCS------CEEEEEECSSSSCEEEEETT----
T ss_pred CCCceEEEEeCCCCEEEEEECC--CeEEEEECCCCCCeEEEEEe-cCcCC------CeEEEEECCCCCEEEEEeCC----
Confidence 3668999999999999877654 33333333322222222222 11111 23789999999988875432
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE---eecCCCCCCccceEEEecCCCCC
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKGIPKSLSVGQVVWAPLNEGL 198 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~---~l~~~~~~~~~~~~~~spdg~~~ 198 (715)
..|.+|++.+++.. .+ ......+..++|+|||+.
T Consensus 172 ----------------------------------------~~i~~w~~~~~~~~~~~~~--~~h~~~v~~l~~sp~g~~- 208 (345)
T 3fm0_A 172 ----------------------------------------DTVKLYREEEDDWVCCATL--EGHESTVWSLAFDPSGQR- 208 (345)
T ss_dssp ----------------------------------------SCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECTTSSE-
T ss_pred ----------------------------------------CcEEEEEecCCCEEEEEEe--cCCCCceEEEEECCCCCE-
Confidence 45888888877543 33 233446778999999997
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEE
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVF 277 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~ 277 (715)
|+..+. + +.-.||...... ....+..............+.. ....+...+|+|++..|+.
T Consensus 209 ---l~s~s~-D------------~~v~iW~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 269 (345)
T 3fm0_A 209 ---LASCSD-D------------RTVRIWRQYLPG---NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT 269 (345)
T ss_dssp ---EEEEET-T------------SCEEEEEEECTT---CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE
T ss_pred ---EEEEeC-C------------CeEEEeccccCC---CCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE
Confidence 765541 1 112344332210 0000000000000000111222 3445788999999999987
Q ss_pred EecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCee
Q 005093 278 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 357 (715)
Q Consensus 278 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 357 (715)
.+.+. .+.++++..+....... .....-... .+...+..++|+|++..++++...++..
T Consensus 270 ~~~d~-----------~i~vw~~~~~~~~~~~~--~~~~~~~~~--------~h~~~V~~v~~~p~~~~~laS~s~Dg~v 328 (345)
T 3fm0_A 270 ACGDD-----------AIRVFQEDPNSDPQQPT--FSLTAHLHQ--------AHSQDVNCVAWNPKEPGLLASCSDDGEV 328 (345)
T ss_dssp EETTS-----------CEEEEEECTTSCTTSCC--EEEEEEETT--------SSSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred EeCCC-----------eEEEEEeCCCCCcceee--EEEEeeecc--------cccCcEeEeEEeCCCceEEEEcCCCCcE
Confidence 77653 25666655433211100 000000000 1222456788999986677888777777
Q ss_pred EEEEEE
Q 005093 358 VIISVN 363 (715)
Q Consensus 358 ~l~~~d 363 (715)
.||.+.
T Consensus 329 ~~W~~~ 334 (345)
T 3fm0_A 329 AFWKYQ 334 (345)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 777654
No 354
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.92 E-value=1.6e-07 Score=96.16 Aligned_cols=290 Identities=11% Similarity=0.037 Sum_probs=146.9
Q ss_pred CccccccceEEeeCCCC-ceEEEEecCCCCCCeEEEEecCCc-c-EEEEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 38 FPVEMTGASAVVPSPSG-SKLLVVRNPENESPIQFELWSQSQ-L-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 38 ~~~~~~~~~~~~~Spdg-~~la~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
|..+.+.+...+|||++ +.||-.+. + +.-.+|.+..... . ..+..+ .+..+ .+..+.|+|||++|+..
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~-D-~~i~vWd~~~~~~~~~~~~~~l-~~h~~------~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASR-D-KTIIMWKLTRDETNYGIPQRAL-RGHSH------FVSDVVISSDGQFALSG 104 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEET-T-SCEEEEEECCSSSCSEEEEEEE-CCCSS------CEEEEEECTTSSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcC-C-CeEEEEECCCCCcccceeeEEE-eCCCC------CEEEEEECCCCCEEEEE
Confidence 33445789999999995 55554433 2 4444554442221 1 111111 11111 23789999999998876
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEEec
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp 193 (715)
+.+.... .+......................+.++ +..+ .......+.+||+.+..............+....|++
T Consensus 105 ~~d~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 105 SWDGTLR--LWDLTTGTTTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp ETTSEEE--EEETTTTEEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred cccccce--EEeecccceeeeecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 5443211 1110000000000000000011112222 1111 1223467889998776655442122234566788999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCccccceeEcCCC
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDG 272 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg 272 (715)
++.. .++.+.. .+..|.++|+ .+++ ...+......+...+|+|||
T Consensus 182 ~~~~----~~~~s~~-------------~d~~i~i~d~-----------------~~~~~~~~~~~h~~~v~~~~~s~~~ 227 (340)
T 4aow_A 182 NSSN----PIIVSCG-------------WDKLVKVWNL-----------------ANCKLKTNHIGHTGYLNTVTVSPDG 227 (340)
T ss_dssp CSSS----CEEEEEE-------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTS
T ss_pred CCCC----cEEEEEc-------------CCCEEEEEEC-----------------CCCceeeEecCCCCcEEEEEECCCC
Confidence 8876 4433311 2235777886 4443 34555566678889999999
Q ss_pred CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee
Q 005093 273 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 273 ~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
+.|+..+.+. .|.++|+.+.......... ..+..+.|+|++. ++..+.
T Consensus 228 ~~l~s~s~Dg-----------~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~-~~~~~~ 275 (340)
T 4aow_A 228 SLCASGGKDG-----------QAMLWDLNEGKHLYTLDGG--------------------DIINALCFSPNRY-WLCAAT 275 (340)
T ss_dssp SEEEEEETTC-----------EEEEEETTTTEEEEEEECS--------------------SCEEEEEECSSSS-EEEEEE
T ss_pred CEEEEEeCCC-----------eEEEEEeccCceeeeecCC--------------------ceEEeeecCCCCc-eeeccC
Confidence 9887666542 4788888764431110000 0233556888876 433333
Q ss_pred eCCeeEEEEEECCCCcEEEecCC----------CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 353 WGSSQVIISVNVSSGELLRITPA----------ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 353 ~~~~~~l~~~d~~tg~~~~l~~~----------~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
++ .|..+|+.++........ ...+....|+++++.|+.... +. .|.+-++.+|
T Consensus 276 -d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~--Dg--~v~iW~~~tG 338 (340)
T 4aow_A 276 -GP--SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT--DN--LVRVWQVTIG 338 (340)
T ss_dssp -TT--EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET--TS--CEEEEEEEC-
T ss_pred -CC--EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC--CC--EEEEEeCCCc
Confidence 33 566678877665433221 112333567888876654332 22 3555566555
No 355
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.92 E-value=9.3e-09 Score=105.90 Aligned_cols=234 Identities=10% Similarity=0.094 Sum_probs=127.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCC--ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS--QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
..+...+|||||+.||.....+ ...+| ..+ .......+. +..+ .+..+.|+|+++ |+..+.+.
T Consensus 98 ~~v~~~~~s~~~~~l~s~~~d~-----~v~iw~~~~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~-l~s~s~d~ 164 (340)
T 1got_B 98 SWVMTCAYAPSGNYVACGGLDN-----ICSIYNLKTREGNVRVSRELA-GHTG------YLSCCRFLDDNQ-IVTSSGDT 164 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTC-----EEEEEETTTCSBSCEEEEEEE-CCSS------CEEEEEEEETTE-EEEEETTS
T ss_pred ccEEEEEECCCCCEEEEEeCCC-----eEEEEECccCCCcceeEEEec-CCCc------cEEEEEECCCCc-EEEEECCC
Confidence 5578899999999998765542 33445 222 112111111 1111 236888999886 54444332
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
. ...|....................+.|.|+ +..+ .......|.+||+.+++..... ......+..++|+|||+.
T Consensus 165 ~--i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sg~~d~~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 165 T--CALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAICFFPNGNA 240 (340)
T ss_dssp C--EEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEE-CCCSSCEEEEEECTTSSE
T ss_pred c--EEEEECCCCcEEEEEcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCeeEEEE-cCCcCCEEEEEEcCCCCE
Confidence 2 122322211111111112222334556665 3323 2334578999999888754431 233446778999999986
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC--CccccceeEcCCCCe
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--ISSAFFPRFSPDGKF 274 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~--~~~~~~~~~spdg~~ 274 (715)
|+..+ .+..|.++|+ ..+.. ..+... ...+...+|||||+.
T Consensus 241 ----l~s~s---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 241 ----FATGS---------------DDATCRLFDL-----------------RADQELMTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp ----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEEEccCCcccceEEEEECCCCCE
Confidence 66544 2235777786 33332 222222 224778999999998
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
|+..+.+ ..|.++|+.++..... . .+ +...+..+.|+|||+.| ++...+
T Consensus 285 l~~g~~d-----------~~i~vwd~~~~~~~~~----------~--------~~-h~~~v~~~~~s~dg~~l-~s~s~D 333 (340)
T 1got_B 285 LLAGYDD-----------FNCNVWDALKADRAGV----------L--------AG-HDNRVSCLGVTDDGMAV-ATGSWD 333 (340)
T ss_dssp EEEEETT-----------SEEEEEETTTCCEEEE----------E--------EC-CSSCEEEEEECTTSSCE-EEEETT
T ss_pred EEEECCC-----------CeEEEEEcccCcEeeE----------e--------ec-CCCcEEEEEEcCCCCEE-EEEcCC
Confidence 8766644 2488888766442110 0 00 11234567899999844 555556
Q ss_pred CeeEEE
Q 005093 355 SSQVII 360 (715)
Q Consensus 355 ~~~~l~ 360 (715)
+..+||
T Consensus 334 ~~i~iW 339 (340)
T 1got_B 334 SFLKIW 339 (340)
T ss_dssp SCEEEE
T ss_pred ccEEec
Confidence 655655
No 356
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.92 E-value=7.4e-10 Score=121.36 Aligned_cols=128 Identities=21% Similarity=0.269 Sum_probs=86.6
Q ss_pred CCCCceEEEEEEecCCCC---CCCCCcEEEEEcCCCCCCCCcc-chHHHHHHHhC-CcEEEEEcCCCCC-CCchhhhhcC
Q 005093 459 KGAQKPFEAIFVSSSHKK---DCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSV-GYSLLIVNYRGSL-GFGEEALQSL 532 (715)
Q Consensus 459 ~~~g~~l~~~l~~P~~~~---~~~~~P~vv~iHGg~~~~~~~~-~~~~~~~la~~-G~~vi~~d~rG~~-~~g~~~~~~~ 532 (715)
+.|.+.+ .+|.|.... ..++.|+||++|||++..+... +.. ..|+++ |++|+.+|||... ||.....
T Consensus 108 sEdcL~l--~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~--- 180 (574)
T 3bix_A 108 SEDCLYL--NIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGD--- 180 (574)
T ss_dssp CSCCCEE--EEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS---
T ss_pred CCcCCEE--EEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCC---
Confidence 3455454 588897532 2356899999999987765442 222 345554 6999999999532 1111100
Q ss_pred CCCCCccchhhHHHHHHHHHHc---CCCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCC
Q 005093 533 PGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNP 593 (715)
Q Consensus 533 ~~~~~~~~~~d~~~~i~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~ 593 (715)
....+...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.... .+|+++|+.++
T Consensus 181 ~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 181 QAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 0112234489999999999986 2479999999999999999998876543 57999998886
No 357
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.90 E-value=6.3e-07 Score=95.10 Aligned_cols=245 Identities=15% Similarity=0.088 Sum_probs=147.3
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
.....||+++ .||...+. ...+| .+|+..++..+... .+ .+..++|||||++|+..+.
T Consensus 108 ~~~l~wS~~n-~lAvgld~------tV~lWd~~tg~~~~~~~~~~~-~~------~V~sv~fspdg~~lasgs~------ 167 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQP-GE------YISSVAWIKEGNYLAVGTS------ 167 (420)
T ss_dssp CBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCST-TC------CEEEEEECTTSSEEEEEET------
T ss_pred ceeEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecCC-CC------cEEEEEECCCCCEEEEEEC------
Confidence 3558999865 67754321 34566 56777776654321 11 2379999999999887533
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
...|.+||+++++..... ......+ ..+++++..
T Consensus 168 --------------------------------------Dg~v~iWd~~~~~~~~~~-~~h~~~v--~~~s~~~~~----- 201 (420)
T 4gga_A 168 --------------------------------------SAEVQLWDVQQQKRLRNM-TSHSARV--GSLSWNSYI----- 201 (420)
T ss_dssp --------------------------------------TSCEEEEETTTTEEEEEE-CCCSSCE--EEEEEETTE-----
T ss_pred --------------------------------------CCeEEEEEcCCCcEEEEE-eCCCCce--EEEeeCCCE-----
Confidence 256999999988765431 2222233 345566664
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCC
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
+.++. ....++..|.. ........+...........|+|+|+.|+..+.+.
T Consensus 202 l~sgs--------------~d~~i~~~d~~---------------~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~ 252 (420)
T 4gga_A 202 LSSGS--------------RSGHIHHHDVR---------------VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 252 (420)
T ss_dssp EEEEE--------------TTSEEEEEETT---------------SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEe--------------CCCceeEeeec---------------ccceeeEEecccccceeeeeecCCCCeeeeeeccc
Confidence 44442 22357777751 02223345556666788899999999988776653
Q ss_pred CCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 005093 283 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 362 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~ 362 (715)
.+.+++..+++.......... .+...+..+.|+|++..++++........|..+
T Consensus 253 -----------~v~i~~~~~~~~~~~~~~~~~---------------~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 253 -----------LVNVWPSAPGEGGWVPLQTFT---------------QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp -----------CEEEEESSCCSSCSCCSEEEC---------------CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred -----------cceEEeeccccccceeeeeec---------------ccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 377778766543211110000 011134456788888777776554444567778
Q ss_pred ECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 363 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 363 d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
|+.+++..........+....++++++.++......+ ..|.+.+..++
T Consensus 307 d~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d--~~I~iwd~~~~ 354 (420)
T 4gga_A 307 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPTM 354 (420)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTTC
T ss_pred eCCccccceeeccccceeeeeecCCCCeEEEEEecCC--CEEEEEECCCC
Confidence 9999987776655554445678888888876553332 23666665443
No 358
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.89 E-value=4.5e-07 Score=93.92 Aligned_cols=121 Identities=7% Similarity=-0.031 Sum_probs=71.6
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceec--CCCCCccccccCCCCCCccccC
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC--AEGDCFPGLYSSSILSNPWLSD 343 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~d 343 (715)
..++|||+.++|.+.. ..++++|+.++....+. . ..+... ....-.| .+...+++++|
T Consensus 205 ~~~~~~g~~~~~~~~~-----------~~v~v~d~~~~~~~~~~-~----~~~~~~~~~~~~~~p----~g~~~~a~~~d 264 (361)
T 2oiz_A 205 IAPALDKDKAHFVSYY-----------GNVYSADFSGDEVKVDG-P----WSLLNDEDKAKNWVP----GGYNLVGLHRA 264 (361)
T ss_dssp SCCEECSSEEEEEBTT-----------SEEEEEECSSSSCEEEE-E----EESCCHHHHHTTCEE----CCSSCEEEETT
T ss_pred EEecccCCEEEEEeCC-----------CeEEEEEecCCCceecc-c----ccccCcccccccccc----CCeeEEEEecC
Confidence 3457899988887643 24899998765432110 0 000000 0000001 12234678999
Q ss_pred CCEEEEEeeeC--------CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 344 GCTMLLSSIWG--------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 344 g~~l~~~~~~~--------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
++.+|+..... ....++.+|+++++...-..... .....++++|+.|+... . ..|.++|..++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n-~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD-G----GNVNVYDISQP 335 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC-S----SCEEEEECSSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC-C----CeEEEEECCCC
Confidence 99888765411 24589999999988765444333 45578999999766433 2 67888887654
No 359
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.89 E-value=7e-08 Score=99.89 Aligned_cols=192 Identities=15% Similarity=0.127 Sum_probs=116.9
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEec-CccccccccCCCcccceeecC--CCCeEEEEe
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNS--DETLIAYVA 115 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSp--Dg~~la~~~ 115 (715)
+.+.+...+|+|++++|+-....+ ...+| ..++....+.. ...+ ..+.|+| +|+.|+..+
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~-----~v~lwd~~~~~~~~~~~~h~~~v----------~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDG-----TCALWDVESGQLLQSFHGHGADV----------LCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCEEEEEECCSSCE----------EEEEECCCSSCCEEEEEE
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEEcCCCCCe----------EEEEEEeCCCCCEEEEEe
Confidence 346688899999999988665542 44566 44444433321 1222 5677776 566666543
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
. ...|.+||+.+++..... ......+..++|+|+|
T Consensus 218 ~--------------------------------------------Dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~ 252 (354)
T 2pbi_B 218 C--------------------------------------------DKKAMVWDMRSGQCVQAF-ETHESDVNSVRYYPSG 252 (354)
T ss_dssp T--------------------------------------------TSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTS
T ss_pred C--------------------------------------------CCeEEEEECCCCcEEEEe-cCCCCCeEEEEEeCCC
Confidence 2 256999999988765431 2334467789999999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC--CccccceeEcCCC
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--ISSAFFPRFSPDG 272 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~--~~~~~~~~~spdg 272 (715)
+. |+..+ .+..|.++|+ ..+.. ..+... ........|||||
T Consensus 253 ~~----l~s~s---------------~D~~v~lwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~~g 296 (354)
T 2pbi_B 253 DA----FASGS---------------DDATCRLYDL-----------------RADREVAIYSKESIIFGASSVDFSLSG 296 (354)
T ss_dssp SE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred CE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEEcCCCcccceeEEEEeCCC
Confidence 86 66554 2235777776 33332 222222 1245678999999
Q ss_pred CeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEe
Q 005093 273 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 351 (715)
Q Consensus 273 ~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~ 351 (715)
+.|+-.+.+. .|.++|+.++.... +.. +...+..++|+|||+.| ++.
T Consensus 297 ~~l~~g~~d~-----------~i~vwd~~~~~~~~~l~~--------------------h~~~v~~l~~spdg~~l-~sg 344 (354)
T 2pbi_B 297 RLLFAGYNDY-----------TINVWDVLKGSRVSILFG--------------------HENRVSTLRVSPDGTAF-CSG 344 (354)
T ss_dssp SEEEEEETTS-----------CEEEEETTTCSEEEEECC--------------------CSSCEEEEEECTTSSCE-EEE
T ss_pred CEEEEEECCC-----------cEEEEECCCCceEEEEEC--------------------CCCcEEEEEECCCCCEE-EEE
Confidence 9887665442 48888886654311 100 11234567899999844 555
Q ss_pred eeCCeeEEE
Q 005093 352 IWGSSQVII 360 (715)
Q Consensus 352 ~~~~~~~l~ 360 (715)
..++..+||
T Consensus 345 s~D~~v~vW 353 (354)
T 2pbi_B 345 SWDHTLRVW 353 (354)
T ss_dssp ETTSEEEEE
T ss_pred cCCCCEEec
Confidence 656655665
No 360
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.89 E-value=4.4e-07 Score=94.85 Aligned_cols=261 Identities=10% Similarity=0.075 Sum_probs=142.0
Q ss_pred EEeeCCCCceEEEEecC------CCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 47 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
..++||||++|+..... ++....+..++ .+++....+.++...+ +-.......+.+||||++|+.....
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r--~~~g~~P~~~~~spDGk~lyV~n~~-- 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR--FLVGTYQWMNALTPDNKNLLFYQFS-- 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC--CCBSCCGGGSEECTTSSEEEEEECS--
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc--cccCCCcceEEEcCCCCEEEEEecC--
Confidence 78999999998765421 00223567777 5666655555431100 0000012589999999998775321
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
....|.++|++++++..-....+ .....|+|+.
T Consensus 198 ----------------------------------------~~~~VsVID~~t~kvv~~I~v~g-----~~~~~p~g~~-- 230 (426)
T 3c75_H 198 ----------------------------------------PAPAVGVVDLEGKTFDRMLDVPD-----CYHIFPASPT-- 230 (426)
T ss_dssp ----------------------------------------SSCEEEEEETTTTEEEEEEECCS-----EEEEEEEETT--
T ss_pred ----------------------------------------CCCeEEEEECCCCeEEEEEEcCC-----ceeeccCCCc--
Confidence 12679999999988653310111 1234566655
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-----ecCCCCc-cccceeEcCCCC
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-----NLTESIS-SAFFPRFSPDGK 273 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~lt~~~~-~~~~~~~spdg~ 273 (715)
.++.... ...+..+++ .+++.. .+..... ....+.+++||+
T Consensus 231 --~~v~~~~--------------dG~~~~V~~-----------------~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 231 --VFYMNCR--------------DGSLARVDF-----------------ADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp --EEEEEET--------------TSSEEEEEC-----------------CTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred --EEEEEcC--------------CCCEEEEEC-----------------CCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 4443321 124555553 222222 1111111 123467899999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCC-ccccccCCCCCCccccCCCEEEEEee
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC-FPGLYSSSILSNPWLSDGCTMLLSSI 352 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~dg~~l~~~~~ 352 (715)
.++|.+.. ..++++|+.++....+.. +....... ..+....+...+.+++|++++|+...
T Consensus 278 ~~~~~s~~-----------g~V~ViD~~~~~~~v~~~--------~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~ 338 (426)
T 3c75_H 278 RLVWPTYT-----------GKIFQADLTAEGATFRAP--------IEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVD 338 (426)
T ss_dssp EEEEEBTT-----------SEEEEEEECSSCEEECCC--------EESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEE
T ss_pred EEEEEeCC-----------CcEEEEeccCCceEEeee--------eeeccccccccccccCCceeeEEcCCCCEEEEEec
Confidence 99988743 259999987654321110 00000000 00000012334678999998888764
Q ss_pred eC-------CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCC-EEEEEEeCCCCCCeEEEEeecccC
Q 005093 353 WG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGD-NIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 353 ~~-------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~-~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
.. +...++.+|++++++..-...........|++|++ .+|.+... ...|.++|+.+.+
T Consensus 339 ~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~---s~~VsVID~~t~k 404 (426)
T 3c75_H 339 QRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAG---TQTLHIYDAATGE 404 (426)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETT---TTEEEEEETTTCC
T ss_pred ccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCC---CCeEEEEECCCCC
Confidence 32 34689999999988765433222123467899998 55544322 3568888876543
No 361
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.89 E-value=2.4e-07 Score=103.53 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=149.6
Q ss_pred EEEEEEeecCC---CCccccccCCCcccccc-ceEEeeCC--CCceEEEEecCCCCCCeEEEEecCC------ccEEEEe
Q 005093 17 FMLSTVISKEN---ENSVTFQWAPFPVEMTG-ASAVVPSP--SGSKLLVVRNPENESPIQFELWSQS------QLEKEFH 84 (715)
Q Consensus 17 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~Sp--dg~~la~~~~~~~~~~~~~~~~~~~------~~~~~~~ 84 (715)
.+.++++.++. .....+ ..+.+. +...+||| ||++||..... +.-.+|.+. .+ +...+..
T Consensus 40 ~v~v~~~~~~~~~~~~~~~~-----~~h~~~~v~~~~~sp~~~~~~l~s~~~d--g~v~vw~~~-~~~~~~~~~~~~~~~ 111 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVVQF-----TGHGSSVVTTVKFSPIKGSQYLCSGDES--GKVIVWGWT-FDKESNSVEVNVKSE 111 (615)
T ss_dssp EEEEEECCSSCCSSCSEEEE-----CTTTTSCEEEEEECSSTTCCEEEEEETT--SEEEEEEEE-EEGGGTEEEEEEEEE
T ss_pred eEEEEECCCCCCccccceEE-----ecCCCceEEEEEECcCCCCCEEEEecCC--CEEEEEeCC-CCcccccccccccch
Confidence 46666676542 112222 223366 89999999 99999877654 322333332 22 1122221
Q ss_pred cCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceE
Q 005093 85 VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSL 164 (715)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 164 (715)
.. ... +.+..+.|||||++|+....... ....|
T Consensus 112 ~~-~~~------~~v~~~~~s~~~~~l~~~~~~~~----------------------------------------~~~~v 144 (615)
T 1pgu_A 112 FQ-VLA------GPISDISWDFEGRRLCVVGEGRD----------------------------------------NFGVF 144 (615)
T ss_dssp EE-CCS------SCEEEEEECTTSSEEEEEECCSS----------------------------------------CSEEE
T ss_pred hh-ccc------ccEEEEEEeCCCCEEEEeccCCC----------------------------------------CccEE
Confidence 11 111 12379999999999988754320 12567
Q ss_pred EEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhh
Q 005093 165 FVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 244 (715)
Q Consensus 165 ~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (715)
++|| .+.....+ ......+..+.|+|+++. +++++. .+..|.++|+
T Consensus 145 ~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~----~l~~~~--------------~d~~v~vwd~------------- 190 (615)
T 1pgu_A 145 ISWD-SGNSLGEV--SGHSQRINACHLKQSRPM----RSMTVG--------------DDGSVVFYQG------------- 190 (615)
T ss_dssp EETT-TCCEEEEC--CSCSSCEEEEEECSSSSC----EEEEEE--------------TTTEEEEEET-------------
T ss_pred EEEE-CCCcceee--ecCCccEEEEEECCCCCc----EEEEEe--------------CCCcEEEEeC-------------
Confidence 8887 23334444 334446778999999996 666653 2236778886
Q ss_pred ccCCCCC-CceecCCCCc---cccceeEcCC-CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 245 ESSSEDL-PVVNLTESIS---SAFFPRFSPD-GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 245 ~~~~~~~-~~~~lt~~~~---~~~~~~~spd-g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
.++ ....+..... .+....|+|| |+.|+..+.+. .|+++|+.+++.......
T Consensus 191 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~~~~-------- 247 (615)
T 1pgu_A 191 ----PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----------KISCFDGKSGEFLKYIED-------- 247 (615)
T ss_dssp ----TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----------CEEEEETTTCCEEEECCB--------
T ss_pred ----CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC-----------eEEEEECCCCCEeEEecc--------
Confidence 433 3345555555 6888999999 99887766542 488889877553211100
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-----CCceeEEEeecCCEEEEE
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-----SNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-----~~~~~~~~s~~~~~l~~~ 394 (715)
.. ..+...+..+.|+ +++.++. ...++ .|..+|+.+++........ .......+ ++++.++..
T Consensus 248 -~~------~~~~~~v~~~~~~-~~~~l~~-~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 315 (615)
T 1pgu_A 248 -DQ------EPVQGGIFALSWL-DSQKFAT-VGADA--TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TGNGRIISL 315 (615)
T ss_dssp -TT------BCCCSCEEEEEES-SSSEEEE-EETTS--EEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-EETTEEEEE
T ss_pred -cc------cccCCceEEEEEc-CCCEEEE-EcCCC--cEEEEECCCCcEEEEEcCCCCcccCceeEEEe-CCCCeEEEE
Confidence 00 0011134566788 8875544 44343 5666788887765544332 11111233 366666554
Q ss_pred EeCCCCCCeEEEEeec
Q 005093 395 SSSPVDVPQVKYGYFV 410 (715)
Q Consensus 395 ~~~~~~p~~l~~~~~~ 410 (715)
..+ ..|.+.++.
T Consensus 316 ~~~----g~i~~~d~~ 327 (615)
T 1pgu_A 316 SLD----GTLNFYELG 327 (615)
T ss_dssp ETT----SCEEEEETT
T ss_pred ECC----CCEEEEECC
Confidence 422 235555554
No 362
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.88 E-value=3.2e-09 Score=108.62 Aligned_cols=210 Identities=10% Similarity=0.077 Sum_probs=114.1
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHH-HHHHHHcCCCC
Q 005093 480 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLAN 558 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~d 558 (715)
..|.|+++||.+.. ...|..++..| ..+|.|+++|++| +|.+... . ..++++.+. ++.+.+.. .
T Consensus 100 ~~~~l~~lhg~~~~--~~~~~~l~~~L-~~~~~v~~~d~~g---~~~~~~~--~-----~~~~~~a~~~~~~i~~~~--~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIIGIQSPR---PNGPMQT--A-----ANLDEVCEAHLATLLEQQ--P 164 (329)
T ss_dssp SSCEEEEECCTTSC--CGGGGGGGGTS-CTTCEEEEECCCT---TTSHHHH--C-----SSHHHHHHHHHHHHHHHC--S
T ss_pred CCCcEEEEeCCccc--chHHHHHHHhc-CCCCeEEEeeCCC---CCCCCCC--C-----CCHHHHHHHHHHHHHHhC--C
Confidence 45789999996654 44666666666 5689999999998 4443211 1 124444443 34444331 2
Q ss_pred CceEEEEEeChhHHHHHHHHhh---CCCceeEEEecCCcchhhhhccCCCCCCc--eeeeccCCC---C-CCCCCCCCCh
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQ---APDKFVAAAARNPLCNLALMVGTTDIPDW--CYVESYGSK---G-KDSFTESPSV 629 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~---~p~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~-~~~~~~~~~~ 629 (715)
..++.|+||||||.++..+|.+ +|+++.+++++.+................ ......... . .........
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTST- 243 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCC-
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccH-
Confidence 3689999999999999999988 89999999988876543211100000000 000000000 0 000000000
Q ss_pred hhHHH----HHhc-Cch--hhccCCCCcEEEEeeCCCCcCCchHHHHHHHHHHHcCCcEEEEEeCCCCcc-CCCCCchHH
Q 005093 630 EDLTR----FHSK-SPI--SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG-IERPQSDFE 701 (715)
Q Consensus 630 ~~~~~----~~~~-sp~--~~~~~i~~P~Lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~-~~~~~~~~~ 701 (715)
..... +... ..+ .....+.+|++++.|+.|..++......+.+.. ..++++.+++ +|. +..+.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~----~~~~~~~v~g-~H~~~~~~~~~~~ 318 (329)
T 3tej_A 244 ELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI----AELDIYRQDC-AHVDIISPGTFEK 318 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE----EEEEEEEESS-CGGGGGSTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc----CCcEEEEecC-ChHHhCCChHHHH
Confidence 11111 1100 000 113456789999999999887665433332222 3588889984 665 443433334
Q ss_pred HHHHHHHHH
Q 005093 702 SFLNIGLWF 710 (715)
Q Consensus 702 ~~~~i~~wl 710 (715)
+...+.+|+
T Consensus 319 ia~~l~~~L 327 (329)
T 3tej_A 319 IGPIIRATL 327 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555555
No 363
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.88 E-value=1.4e-07 Score=107.31 Aligned_cols=242 Identities=14% Similarity=0.060 Sum_probs=139.9
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCc----cE-EEEecCccccccccCCCcccceeecCCCCeEEEEe
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ----LE-KEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
+.+.+...+|+|++..++.....+ +.-.+|.+..... .. .+...... +..+.|||||+.|+..+
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D-~~i~~W~~~~~~~~~~~~~~~~~~h~~~----------v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRD-KSIILWKLTKDDKAYGVAQRRLTGHSHF----------VEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETT-SEEEEEECCCSTTCSCEEEEEEECCSSC----------EEEEEECTTSSEEEEEE
T ss_pred CCceeEEEEecCCCCCEEEEEeCC-CcEEEEEccCCCcccccccceecCCCCc----------EEEEEECCCCCEEEEEe
Confidence 446789999999876555554443 3223333322221 11 12212222 27899999999887653
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
. ...|.+||+.+++..... ......+..++|+|||
T Consensus 450 ~--------------------------------------------Dg~v~vwd~~~~~~~~~~-~~h~~~v~~~~~s~~~ 484 (694)
T 3dm0_A 450 W--------------------------------------------DGELRLWDLAAGVSTRRF-VGHTKDVLSVAFSLDN 484 (694)
T ss_dssp T--------------------------------------------TSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTS
T ss_pred C--------------------------------------------CCcEEEEECCCCcceeEE-eCCCCCEEEEEEeCCC
Confidence 2 267999999988654331 2334467789999999
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC----CCCccccceeEcCC
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT----ESISSAFFPRFSPD 271 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt----~~~~~~~~~~~spd 271 (715)
+. |+..+ .+..|.++|+ .+.....+. .+...+....|+|+
T Consensus 485 ~~----l~s~s---------------~D~~i~iwd~-----------------~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 485 RQ----IVSAS---------------RDRTIKLWNT-----------------LGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp SC----EEEEE---------------TTSCEEEECT-----------------TSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred CE----EEEEe---------------CCCEEEEEEC-----------------CCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 98 77655 2235666674 332222222 23345788999999
Q ss_pred CC--eEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEE
Q 005093 272 GK--FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 349 (715)
Q Consensus 272 g~--~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~ 349 (715)
+. .|+-.+.+ ..|.++|+.+++..... . .+...+..++|+|||+. ++
T Consensus 529 ~~~~~l~s~s~d-----------~~v~vwd~~~~~~~~~~------------------~-~h~~~v~~v~~spdg~~-l~ 577 (694)
T 3dm0_A 529 TLQPTIVSASWD-----------KTVKVWNLSNCKLRSTL------------------A-GHTGYVSTVAVSPDGSL-CA 577 (694)
T ss_dssp SSSCEEEEEETT-----------SCEEEEETTTCCEEEEE------------------C-CCSSCEEEEEECTTSSE-EE
T ss_pred CCcceEEEEeCC-----------CeEEEEECCCCcEEEEE------------------c-CCCCCEEEEEEeCCCCE-EE
Confidence 84 34443333 24888888764431100 0 01123456789999984 45
Q ss_pred EeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 350 SSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 350 ~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+...++. |..+|+.+++..........+....|++++..++... . ..|.+.++.++
T Consensus 578 sg~~Dg~--i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~----~~i~iwd~~~~ 633 (694)
T 3dm0_A 578 SGGKDGV--VLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-E----HGIKIWDLESK 633 (694)
T ss_dssp EEETTSB--CEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-T----TEEEEEETTTT
T ss_pred EEeCCCe--EEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-C----CCEEEEECCCC
Confidence 5555554 5555888887665544444444557788776554432 2 23666676543
No 364
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.88 E-value=1.7e-07 Score=96.42 Aligned_cols=232 Identities=13% Similarity=0.107 Sum_probs=122.1
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
...|.++|+.++.. ... +..+.+.+...+|||||++|+-....+ ...+| ..+.............
T Consensus 97 D~~v~lwd~~~~~~-~~~-----~~~h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~~~~~~--- 162 (343)
T 2xzm_R 97 DKTLRLWDLRTGTT-YKR-----FVGHQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILGECKFSSAEKENHS--- 162 (343)
T ss_dssp TSEEEEEETTSSCE-EEE-----EECCCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSSCEEEECCTTTSCS---
T ss_pred CCcEEEEECCCCcE-EEE-----EcCCCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccCCceeeeecccCCC---
Confidence 44566666654421 122 222336688999999999998665432 34455 2232221111111111
Q ss_pred cCCCcccceeecCCCC----------eEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCce
Q 005093 94 YADGWFEGISWNSDET----------LIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 163 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~----------~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (715)
.++..+.|+|+++ .|+..+ ....
T Consensus 163 ---~~v~~~~~~~~~~~~~~~~~~~~~l~s~~--------------------------------------------~d~~ 195 (343)
T 2xzm_R 163 ---DWVSCVRYSPIMKSANKVQPFAPYFASVG--------------------------------------------WDGR 195 (343)
T ss_dssp ---SCEEEEEECCCCCSCSCCCSSCCEEEEEE--------------------------------------------TTSE
T ss_pred ---ceeeeeeeccccccccccCCCCCEEEEEc--------------------------------------------CCCE
Confidence 1337889999874 222221 2367
Q ss_pred EEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhh
Q 005093 164 LFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELEL 243 (715)
Q Consensus 164 l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 243 (715)
|.+||........+ ......+..++|+|||+. |+..+ .+..|.++|+.
T Consensus 196 i~iwd~~~~~~~~~--~~h~~~v~~~~~s~~g~~----l~sgs---------------~dg~v~iwd~~----------- 243 (343)
T 2xzm_R 196 LKVWNTNFQIRYTF--KAHESNVNHLSISPNGKY----IATGG---------------KDKKLLIWDIL----------- 243 (343)
T ss_dssp EEEEETTTEEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTCEEEEEESS-----------
T ss_pred EEEEcCCCceeEEE--cCccccceEEEECCCCCE----EEEEc---------------CCCeEEEEECC-----------
Confidence 89999654444444 233446778999999997 76554 22367777751
Q ss_pred hccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCC
Q 005093 244 KESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE 323 (715)
Q Consensus 244 ~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~ 323 (715)
..............+...+||||++.|+. +.+. .+.++++.++....+..-... ++...
T Consensus 244 -----~~~~~~~~~~~~~~v~~v~~sp~~~~la~-~~d~-----------~v~iw~~~~~~~~~~~~~~~~--~~~~~-- 302 (343)
T 2xzm_R 244 -----NLTYPQREFDAGSTINQIAFNPKLQWVAV-GTDQ-----------GVKIFNLMTQSKAPVCTIEAE--PITKA-- 302 (343)
T ss_dssp -----CCSSCSEEEECSSCEEEEEECSSSCEEEE-EESS-----------CEEEEESSSCCSCSEEECCCC--SGGGB--
T ss_pred -----CCcccceeecCCCcEEEEEECCCCCEEEE-ECCC-----------CEEEEEeCCCCCCceEEeecC--cchhh--
Confidence 22222222222345788999999987753 3221 277778776543221000000 00000
Q ss_pred CCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 324 GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 324 ~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
....+ +...+..++|+|+|+.| ++...++..++|.++
T Consensus 303 -~~~~~-~~~~v~~~~~sp~g~~l-~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 303 -EGQKG-KNPQCTSLAWNALGKKL-FAGFTDGVIRTFSFE 339 (343)
T ss_dssp -TTBCC-SCCCEEEEEECSSSCCE-EEEETTSEEEEEEEE
T ss_pred -hhhcC-CCCceEEEEECCCCCeE-EEecCCceEEEEEEE
Confidence 00000 11134567899999855 555556666666543
No 365
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.87 E-value=2.3e-08 Score=106.75 Aligned_cols=194 Identities=14% Similarity=0.113 Sum_probs=119.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
..+...+|||||++||-....+ ...+|+... .+.... |..-.....+..++|||||+.||..+.+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-----~V~iwd~~~--~l~~l~---~~~~~~~~sv~svafSPDG~~LAsgs~D----- 150 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-----NVSVFKDNK--MLTNLD---SKGNLSSRTYHCFEWNPIESSIVVGNED----- 150 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-----CEEEEETTE--EEEECC---CSSCSTTTCEEEEEECSSSSCEEEEETT-----
T ss_pred CcEEEEEECCCCCEEEEEeCCC-----cEEEEeCCc--eeeecc---CCCccccccEEEEEEcCCCCEEEEEcCC-----
Confidence 5689999999999999887664 244563222 222222 1110001123789999999999986432
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce--------EeecC-CC-CCCccceEEEe
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--------QAVKG-IP-KSLSVGQVVWA 192 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~--------~~l~~-~~-~~~~~~~~~~s 192 (715)
..|.+||++++.. ..+.. .. ....+..++||
T Consensus 151 ---------------------------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 151 ---------------------------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp ---------------------------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred ---------------------------------------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 6699999988853 33310 01 12357789999
Q ss_pred cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc----eecC-CCCcccccee
Q 005093 193 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV----VNLT-ESISSAFFPR 267 (715)
Q Consensus 193 pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~lt-~~~~~~~~~~ 267 (715)
||| - ++... +..++.+|+ +++.. +.+. .+...+...+
T Consensus 192 Pdg-L----aass~----------------D~tVrlWd~-----------------~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 192 EDV-L----VAALS----------------NNSVFSMTV-----------------SASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp TTE-E----EEEET----------------TCCEEEECC-----------------CSSSSCCCEEEEECCCSSCCCCEE
T ss_pred CCc-E----EEEeC----------------CCeEEEEEC-----------------CCCccccceeeecccccCcEEEEE
Confidence 999 6 66543 225777776 44443 2342 4456789999
Q ss_pred EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcc--ccCCC
Q 005093 268 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW--LSDGC 345 (715)
Q Consensus 268 ~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~dg~ 345 (715)
|| |+.|+-++. ..|.++|+.++....+..+ +...+..++| +||+.
T Consensus 234 Fs--g~~LASa~~------------~tIkLWd~~~~~~~~~~~g-------------------h~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 234 IV--DYKVVLTCP------------GYVHKIDLKNYSISSLKTG-------------------SLENFHIIPLNHEKEST 280 (588)
T ss_dssp EE--TTEEEEECS------------SEEEEEETTTTEEEEEECS-------------------CCSCCCEEEETTCSSCE
T ss_pred EE--CCEEEEEeC------------CeEEEEECCCCeEEEEEcC-------------------CCceEEEEEeeeCCCCC
Confidence 99 678876652 2488899887554222101 1124556678 88986
Q ss_pred EEEEEeeeCCeeEEEEEE
Q 005093 346 TMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 346 ~l~~~~~~~~~~~l~~~d 363 (715)
.+.++.+.|. +||.+|
T Consensus 281 -~La~a~edG~-klw~~d 296 (588)
T 2j04_A 281 -ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -EEEECSSCEE-EEEESS
T ss_pred -EEEEEcCCCC-EEEeec
Confidence 4555555666 777754
No 366
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.87 E-value=2e-06 Score=88.38 Aligned_cols=144 Identities=9% Similarity=-0.023 Sum_probs=89.9
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+||+++++...+........+..++|+|||+. |+..+ .+..|.++|+
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~----lasg~---------------~dg~i~iwd~---------- 199 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL----LALYS---------------PDGILDVYNL---------- 199 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE----EEEEC---------------TTSCEEEEES----------
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE----EEEEc---------------CCCEEEEEEC----------
Confidence 569999999988755421222335778999999986 55433 2236888887
Q ss_pred hhhccCCCCCCc--eecCC-CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeeeee
Q 005093 242 ELKESSSEDLPV--VNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIP 317 (715)
Q Consensus 242 ~~~~~~~~~~~~--~~lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~ 317 (715)
.+++. ..+.. +...+....|||||++|+..+.. .|.++|+.+.+.. .+..-..
T Consensus 200 -------~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~------------~v~iwd~~~~~~~~~~~~~~~---- 256 (343)
T 3lrv_A 200 -------SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ------------TVVCFDLRKDVGTLAYPTYTI---- 256 (343)
T ss_dssp -------SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS------------BEEEEETTSSTTCBSSCCCBC----
T ss_pred -------CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC------------eEEEEEcCCCCcceeeccccc----
Confidence 44443 35555 56778999999999998877722 4888998775532 1111000
Q ss_pred ceecCCCCCccccccCCCC--CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 318 VVQCAEGDCFPGLYSSSIL--SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~--~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
.. .... .++|+|+|+.++..+..++..++|.++.......
T Consensus 257 -------~~------~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 257 -------PE------FKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp ------------------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred -------cc------ccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 00 0112 3789999996655444366677777765444433
No 367
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.86 E-value=1.9e-07 Score=95.71 Aligned_cols=263 Identities=7% Similarity=-0.113 Sum_probs=141.0
Q ss_pred ceEEEEEEEeecCCCC--ccccccCCCccccccceEEeeCCCCc-eEEEEecCCCCCCeEEEEe-c-CCccEEEEecCcc
Q 005093 14 RKKFMLSTVISKENEN--SVTFQWAPFPVEMTGASAVVPSPSGS-KLLVVRNPENESPIQFELW-S-QSQLEKEFHVPQT 88 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Spdg~-~la~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 88 (715)
....|+++++...... ...+. .....+...+|||||+ .|+.....+ ...+| . .+.....+.. ..
T Consensus 31 ~d~~v~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~~~~~-~~ 99 (342)
T 1yfq_A 31 WDGSLTVYKFDIQAKNVDLLQSL-----RYKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDLIGSPSFQALTN-NE 99 (342)
T ss_dssp TTSEEEEEEEETTTTEEEEEEEE-----ECSSCEEEEEEEESSSEEEEEEETTS-----CEEEECSSSSSSEEECBS-CC
T ss_pred CCCeEEEEEeCCCCccccceeee-----ecCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEeccCCceEeccc-cC
Confidence 4456777777766411 12121 2236689999999999 888765442 23344 3 3322221111 00
Q ss_pred ccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
.. ..+..+.|+| ++.|+..+. ...|.+||
T Consensus 100 ~~------~~v~~l~~~~-~~~l~s~~~--------------------------------------------d~~i~iwd 128 (342)
T 1yfq_A 100 AN------LGICRICKYG-DDKLIAASW--------------------------------------------DGLIEVID 128 (342)
T ss_dssp CC------SCEEEEEEET-TTEEEEEET--------------------------------------------TSEEEEEC
T ss_pred CC------CceEEEEeCC-CCEEEEEcC--------------------------------------------CCeEEEEc
Confidence 11 1237899999 887776532 25689999
Q ss_pred ccC---------CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 169 INS---------GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 169 ~~~---------g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
+.+ ++.... ......+..+.|+|++ ++... ....|.++|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~------l~~~~---------------~d~~i~i~d~-------- 177 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNN--TKVKNKIFTMDTNSSR------LIVGM---------------NNSQVQWFRL-------- 177 (342)
T ss_dssp HHHHTTBCEEEEESCSSS--SSSCCCEEEEEECSSE------EEEEE---------------STTEEEEEES--------
T ss_pred ccccccccccccCCeeeE--EeeCCceEEEEecCCc------EEEEe---------------CCCeEEEEEC--------
Confidence 876 543332 2234456788898865 33333 2236888887
Q ss_pred hhhhhccCCCC-CCc---eecCCCCccccceeEcC-CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceee
Q 005093 240 ELELKESSSED-LPV---VNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 314 (715)
Q Consensus 240 ~~~~~~~~~~~-~~~---~~lt~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~ 314 (715)
.. +.. .........+..+.|+| ||+.|+..+.+. .+.++++...+..........
T Consensus 178 ---------~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg-----------~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 178 ---------PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG-----------RVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp ---------SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS-----------EEEEEECCTTCCSTTCTTCEE
T ss_pred ---------CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC-----------cEEEEEEcCCCccccccccee
Confidence 33 221 13334455688899999 999888776542 366666655410000000000
Q ss_pred eeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCEEEE
Q 005093 315 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~ 393 (715)
.. ..........+...+..+.|+|+++.|+ +...++ .|..+|+.+++........ . .....+++++..|+.
T Consensus 238 -~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg--~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~~~~~l~s 309 (342)
T 1yfq_A 238 -FR---CHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGSDG--IISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNILCL 309 (342)
T ss_dssp -EE---CCCCCTTCCSSCCCEEEEEECTTTCCEE-EEETTS--CEEEEETTTTEEEEECCCCSS-SEEEEEEECSSEEEE
T ss_pred -ee---cccccccccccceeEEEEEEcCCCCEEE-EecCCc--eEEEEcCccHhHhhhhhcccC-CCceEecCCCCeEEE
Confidence 00 0000000000011345678999998654 444343 5667788888866554432 2 122333477777666
Q ss_pred EEeC
Q 005093 394 VSSS 397 (715)
Q Consensus 394 ~~~~ 397 (715)
....
T Consensus 310 ~s~D 313 (342)
T 1yfq_A 310 ATSD 313 (342)
T ss_dssp EEEC
T ss_pred EecC
Confidence 5543
No 368
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.85 E-value=5.6e-09 Score=106.44 Aligned_cols=211 Identities=14% Similarity=0.115 Sum_probs=112.6
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHH-HHHHHcCCCCCce
Q 005093 483 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGLANPSK 561 (715)
Q Consensus 483 ~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i-~~l~~~~~~d~~~ 561 (715)
.|+++||.+.......|..++..|. .++.|+++|++| +|.+... ........++++.+.+ +.+... ....+
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G---~g~~~~~--~~~~~~~~~~~~a~~~~~~i~~~--~~~~p 162 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPG---YGTGTGT--GTALLPADLDTALDAQARAILRA--AGDAP 162 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTT---CCBC-----CBCCEESSHHHHHHHHHHHHHHH--HTTSC
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCC---CCCCccc--ccCCCCCCHHHHHHHHHHHHHHh--cCCCC
Confidence 7999997211112446677777775 789999999999 4432000 0001112244443332 222222 12467
Q ss_pred EEEEEeChhHHHHHHHHhhC----CCceeEEEecCCcchhhhhccCCCCCCceeeeccCCCCCCCCCCCCChhhH---HH
Q 005093 562 VTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDL---TR 634 (715)
Q Consensus 562 i~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 634 (715)
+.++|||+||.++..+|.+. ++.+++++++++........ ...+. ..+................. ..
T Consensus 163 ~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~----~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~ 236 (319)
T 2hfk_A 163 VVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP----IEVWS--RQLGEGLFAGELEPMSDARLLAMGR 236 (319)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH----HHHTH--HHHHHHHHHTCSSCCCHHHHHHHHH
T ss_pred EEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH----HHHHH--HHhhHHHHHhhccccchHHHHHHHH
Confidence 99999999999999998876 45688998887653210000 00000 00000000000000011111 11
Q ss_pred HHhcCchhhccCCCCcEEEEeeCCCCcCCchH-HHHHHHHHHHc-CCcEEEEEeCCCCccCCCCCchHHHHHHHHHHHHH
Q 005093 635 FHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREK-GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 712 (715)
Q Consensus 635 ~~~~sp~~~~~~i~~P~Lii~G~~D~~v~~~~-~~~~~~~l~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 712 (715)
+...........+++|+++++| .|..++... ...+ ... ...++++.++ ++|.....+....+.+.|.+|+++
T Consensus 237 ~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~----~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~ 310 (319)
T 2hfk_A 237 YARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDW----RAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDA 310 (319)
T ss_dssp HHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCC----SCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccch----hhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHh
Confidence 1110000123678899999999 999888764 2222 221 2347888998 488743322566788889999876
Q ss_pred h
Q 005093 713 Y 713 (715)
Q Consensus 713 ~ 713 (715)
.
T Consensus 311 ~ 311 (319)
T 2hfk_A 311 I 311 (319)
T ss_dssp H
T ss_pred c
Confidence 4
No 369
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.85 E-value=3.6e-08 Score=99.97 Aligned_cols=237 Identities=14% Similarity=0.109 Sum_probs=128.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
..+...+|||||+.|+.....+ ...+| ..++......... + .+..+.|+|+++.|+..+.+...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~---~------~v~~~~~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDK-----TLKIWDVSSGKCLKTLKGHS---N------YVFCCNFNPQSNLIVSGSFDESV 131 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECCS---S------CEEEEEECSSSSEEEEEETTSCE
T ss_pred CceEEEEEcCCCCEEEEECCCC-----EEEEEECCCCcEEEEEcCCC---C------CEEEEEEcCCCCEEEEEeCCCcE
Confidence 5688999999999998775543 34555 3444333332111 1 12689999999988877654432
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
. .|....................+.|.++ +..+ .......|.+||+.+++............+..+.|+|+|+.
T Consensus 132 ~--iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 206 (312)
T 4ery_A 132 R--IWDVKTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY-- 206 (312)
T ss_dssp E--EEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE--
T ss_pred E--EEECCCCEEEEEecCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE--
Confidence 1 2222211111111111222334456655 3333 23335789999998877543210223335667899999997
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCc--cccceeEc-CCCCeE
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESIS--SAFFPRFS-PDGKFL 275 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~--~~~~~~~s-pdg~~l 275 (715)
|+... .+..|.++|+ .+++ ...+..... ......++ ++|+.|
T Consensus 207 --l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
T 4ery_A 207 --ILAAT---------------LDNTLKLWDY-----------------SKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 252 (312)
T ss_dssp --EEEEE---------------TTTEEEEEET-----------------TTTEEEEEECSSCCSSSCCCEEEECSSSCEE
T ss_pred --EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEEEecCCceEEEEEEEEeCCCcEE
Confidence 76654 2236888887 4443 333333322 12233454 566666
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEee-eC
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WG 354 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~-~~ 354 (715)
+..+.+ ..|+++|+.+++......+ +...+..++|+|++..++..+. .+
T Consensus 253 ~sg~~d-----------g~i~vwd~~~~~~~~~~~~-------------------h~~~v~~~~~~p~~~~l~s~~~~~d 302 (312)
T 4ery_A 253 VSGSED-----------NLVYIWNLQTKEIVQKLQG-------------------HTDVVISTACHPTENIIASAALEND 302 (312)
T ss_dssp EECCTT-----------SCEEEEETTTCCEEEEECC-------------------CSSCEEEEEECSSSSEEEEEECTTT
T ss_pred EEECCC-----------CEEEEEECCCchhhhhhhc-------------------cCCcEEEEeecCcCCceEEEEccCC
Confidence 544433 2488899877543111000 1112345679999985544432 34
Q ss_pred CeeEEEEE
Q 005093 355 SSQVIISV 362 (715)
Q Consensus 355 ~~~~l~~~ 362 (715)
+...+|..
T Consensus 303 ~~i~~W~~ 310 (312)
T 4ery_A 303 KTIKLWKS 310 (312)
T ss_dssp CCEEEEEC
T ss_pred ccEEEecC
Confidence 55566654
No 370
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.84 E-value=4.9e-07 Score=94.86 Aligned_cols=249 Identities=12% Similarity=0.081 Sum_probs=140.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCc------cEEEEe-cCccccccccCCCcccceeecCC----C-
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ------LEKEFH-VPQTVHGSVYADGWFEGISWNSD----E- 108 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~wSpD----g- 108 (715)
+.+...+|+| +.|+.....+ ...+| ..++ ...... .... +..+.|+|+ |
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDG-----YLKVWDNKLLDNENPKDKSYSHFVHKSG----------LHHVDVLQAIERDAF 79 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTS-----EEEEEESBCCTTCCGGGGEEEEECCTTC----------EEEEEEEEEEETTTE
T ss_pred cCeEEEEecC--CeEEEEcCCC-----EEEEEECCCcccccCCCcceEEecCCCc----------EEEEEEecccccCCc
Confidence 6789999999 5666554432 33445 3333 222222 1222 379999999 8
Q ss_pred --CeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc------eEeecCC
Q 005093 109 --TLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE------VQAVKGI 180 (715)
Q Consensus 109 --~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~------~~~l~~~ 180 (715)
+.|+..+. ...|++|++++++ ...+...
T Consensus 80 ~~~~l~s~~~--------------------------------------------dg~i~iw~~~~~~~~~~~~~~~~~~~ 115 (397)
T 1sq9_A 80 ELCLVATTSF--------------------------------------------SGDLLFYRITREDETKKVIFEKLDLL 115 (397)
T ss_dssp EEEEEEEEET--------------------------------------------TSCEEEEEEEECTTTCCEEEEEECCS
T ss_pred cccEEEEEcC--------------------------------------------CCCEEEEEccCCcccccccceeeccc
Confidence 87776532 2569999998887 5555211
Q ss_pred CC---CCccceEEEe----cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc
Q 005093 181 PK---SLSVGQVVWA----PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 253 (715)
Q Consensus 181 ~~---~~~~~~~~~s----pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (715)
.. ...+..+.|+ |+++. +++++..+ ..|+++|+......+. ....
T Consensus 116 ~~~~~~~~v~~~~~~~~~~~~~~~----~l~~~~~d--------------g~i~iwd~~~~~~~~~----------~~~~ 167 (397)
T 1sq9_A 116 DSDMKKHSFWALKWGASNDRLLSH----RLVATDVK--------------GTTYIWKFHPFADESN----------SLTL 167 (397)
T ss_dssp CTTGGGSCEEEEEEECCC----CE----EEEEEETT--------------SCEEEEEEESSSSHHH----------HTTT
T ss_pred ccccCCCcEEEEEEeeccCCCCce----EEEEEeCC--------------CcEEEEeCCccccccc----------ccee
Confidence 11 2567889999 99884 47766322 3577777610000000 1222
Q ss_pred e-----ec-------CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceec
Q 005093 254 V-----NL-------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC 321 (715)
Q Consensus 254 ~-----~l-------t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~ 321 (715)
. .+ ......+....|+|+| .|+..+.+ ..|+++|+.+++.... +..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----------g~i~i~d~~~~~~~~~----------~~~ 225 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----------GTVQISELSTLRPLYN----------FES 225 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----------SEEEEEETTTTEEEEE----------EEC
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----------CcEEEEECCCCceeEE----------Eec
Confidence 2 33 2345567889999999 66655443 2488889876432111 000
Q ss_pred CCCCCccccc---cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC--------------CCCceeEEE
Q 005093 322 AEGDCFPGLY---SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--------------ESNFSWSLL 384 (715)
Q Consensus 322 ~~~~~~~g~~---~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~--------------~~~~~~~~~ 384 (715)
.. .+ ...+..+.|+|+++.|+..+.+.....|..+|+.+++....... ...+....|
T Consensus 226 ~~------~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 226 QH------SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp CC---------CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred cc------cccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 00 00 11345678999999776655543336788889988876554432 333445577
Q ss_pred eecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 385 TLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 385 s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+++++.|+.... -..|.+.++.++
T Consensus 300 ~~~~~~l~~~~~----dg~i~iwd~~~~ 323 (397)
T 1sq9_A 300 NDSGETLCSAGW----DGKLRFWDVKTK 323 (397)
T ss_dssp CSSSSEEEEEET----TSEEEEEETTTT
T ss_pred CCCCCEEEEEeC----CCeEEEEEcCCC
Confidence 888876655432 235667776543
No 371
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.84 E-value=4.2e-07 Score=92.95 Aligned_cols=204 Identities=14% Similarity=0.088 Sum_probs=114.3
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecC--CCCeEEEEeecCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSp--Dg~~la~~~~~~~ 119 (715)
.+.+...+|||||++||..... +.-.+|.+..+....++...-....+ .+..+.|+| |++.|+..+.+
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~d~~~l~s~~~d-- 80 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSD--QHIKVFKLDKDTSNWELSDSWRAHDS------SIVAIDWASPEYGRIIASASYD-- 80 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETT--SEEEEEEECSSSCCEEEEEEEECCSS------CEEEEEECCGGGCSEEEEEETT--
T ss_pred ccceeEEEEcCCCCEEEEeeCC--CeEEEEECCCCCCcceecceeccCCC------cEEEEEEcCCCCCCEEEEEcCC--
Confidence 3678999999999999877554 22233333322222222211111111 237999999 68888775332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc----------eEeecCCCCCCccceE
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----------VQAVKGIPKSLSVGQV 189 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~----------~~~l~~~~~~~~~~~~ 189 (715)
..|.+||+++++ ...+ ......+..+
T Consensus 81 ------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~ 116 (351)
T 3f3f_A 81 ------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTL--NDSKGSLYSV 116 (351)
T ss_dssp ------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEE--CCCSSCEEEE
T ss_pred ------------------------------------------CeEEEEecCCCcccccccCcceeeee--cccCCceeEE
Confidence 568999998763 2333 2334567789
Q ss_pred EEecC--CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eec----------
Q 005093 190 VWAPL--NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL---------- 256 (715)
Q Consensus 190 ~~spd--g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l---------- 256 (715)
.|+|+ ++. |+..+ .+..|.++|+ .+++. ..+
T Consensus 117 ~~~~~~~~~~----l~~~~---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 117 KFAPAHLGLK----LACLG---------------NDGILRLYDA-----------------LEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EECCGGGCSE----EEEEE---------------TTCEEEEEEC-----------------SSTTCTTCCEEEEEEESCS
T ss_pred EEcCCCCCcE----EEEec---------------CCCcEEEecC-----------------CChHHhccccccccccccc
Confidence 99999 876 66544 2236777776 22221 111
Q ss_pred ---CCCCccccceeEcCC---CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccc
Q 005093 257 ---TESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 330 (715)
Q Consensus 257 ---t~~~~~~~~~~~spd---g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~ 330 (715)
...........|+|+ ++.|+..+.+. .+...+...+....+. . . .+
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~-------~---~------~~- 212 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-----------AIIYQRGKDGKLHVAA-------K---L------PG- 212 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-----------EEEEEECTTSCEEEEE-------E---C------CC-
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCC-----------cEEEEccCCCceeeee-------e---c------CC-
Confidence 123345778899998 88777666542 2333333332211010 0 0 00
Q ss_pred ccCCCCCCccccCCC---EEEEEeeeCCeeEEEEEE
Q 005093 331 YSSSILSNPWLSDGC---TMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 331 ~~~~~~~~~~~~dg~---~l~~~~~~~~~~~l~~~d 363 (715)
+...+..+.|+|++. .++++...++...+|.+.
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 112345678999983 466777767766676655
No 372
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.84 E-value=4.9e-07 Score=93.48 Aligned_cols=115 Identities=13% Similarity=0.129 Sum_probs=74.6
Q ss_pred cccccceEEeeCCC---CceEEEEecCCCCCCeEEEEecCCccE-EEEe-cCccccccccCCCcccceeecCCCCeEEEE
Q 005093 40 VEMTGASAVVPSPS---GSKLLVVRNPENESPIQFELWSQSQLE-KEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 40 ~~~~~~~~~~~Spd---g~~la~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
.+.+.+...+|||| |+.|+..... +.-.+|.+...+... .... .... +..+.|+|||++|+..
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWA--NDVRCWEVQDSGQTIPKAQQMHTGP----------VLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETT--SEEEEEEECTTSCEEEEEEEECSSC----------EEEEEECTTSSEEEEE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCC--CcEEEEEcCCCCceeEEEeccccCC----------EEEEEECcCCCEEEEE
Confidence 34477999999999 5888776554 222233332323332 2222 2222 2799999999998875
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEE--e
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW--A 192 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~--s 192 (715)
+. ...|.+||+++++...+ ......+..+.| +
T Consensus 105 ~~--------------------------------------------dg~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 105 SC--------------------------------------------DKTAKMWDLSSNQAIQI--AQHDAPVKTIHWIKA 138 (368)
T ss_dssp ET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEEEEC
T ss_pred cC--------------------------------------------CCcEEEEEcCCCCceee--ccccCceEEEEEEeC
Confidence 32 26799999999987776 344456778899 8
Q ss_pred cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 193 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 193 pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
|+++. |+... .+..|.++|+
T Consensus 139 ~~~~~----l~~~~---------------~dg~i~vwd~ 158 (368)
T 3mmy_A 139 PNYSC----VMTGS---------------WDKTLKFWDT 158 (368)
T ss_dssp SSCEE----EEEEE---------------TTSEEEEECS
T ss_pred CCCCE----EEEcc---------------CCCcEEEEEC
Confidence 88886 55544 2236777776
No 373
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.84 E-value=1.5e-07 Score=97.89 Aligned_cols=205 Identities=11% Similarity=0.096 Sum_probs=120.2
Q ss_pred cccceEEeeCCC--CceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCC--CCeEEEEeec
Q 005093 42 MTGASAVVPSPS--GSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEE 117 (715)
Q Consensus 42 ~~~~~~~~~Spd--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~~~ 117 (715)
.+.+...+|||+ ++.|+..... +.-.+|.+ ..++...+..... ... .+..+.|+|+ |+.|+..+.
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~d--g~v~iwd~-~~~~~~~~~~~~~-~~~------~v~~~~~~~~~~~~~l~~~~~- 123 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYD--GKVLIWKE-ENGRWSQIAVHAV-HSA------SVNSVQWAPHEYGPLLLVASS- 123 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETT--SCEEEEEE-ETTEEEEEEEECC-CSS------CEEEEEECCGGGCSEEEEEET-
T ss_pred CCcEEEEEeCCCCCCCEEEEeccC--CEEEEEEc-CCCceeEeeeecC-CCc------ceEEEEeCCCCCCCEEEEecC-
Confidence 367899999988 8888876554 32233332 3343222222211 111 2379999999 888877532
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce---EeecCCCCCCccceEEEec-
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAP- 193 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~---~~l~~~~~~~~~~~~~~sp- 193 (715)
...|.+||+.++.. ..+ ......+..+.|+|
T Consensus 124 -------------------------------------------d~~i~v~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 124 -------------------------------------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPA 158 (379)
T ss_dssp -------------------------------------------TSEEEEEECCTTSCCCEEEE--ECCTTCEEEEEECCC
T ss_pred -------------------------------------------CCcEEEEecCCCCceeeEEe--cCCCCceEEEEEcCc
Confidence 25689999987732 223 23344677899999
Q ss_pred ------------CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-----ceec
Q 005093 194 ------------LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNL 256 (715)
Q Consensus 194 ------------dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l 256 (715)
|++. |+... .+..|.++|+ .++. ...+
T Consensus 159 ~~~~~~~~~~~~~~~~----l~~~~---------------~dg~i~i~d~-----------------~~~~~~~~~~~~~ 202 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRK----FVTGG---------------ADNLVKIWKY-----------------NSDAQTYVLESTL 202 (379)
T ss_dssp C----------CTTCE----EEEEE---------------TTSCEEEEEE-----------------ETTTTEEEEEEEE
T ss_pred cccccccccCCCCCCE----EEEEe---------------CCCeEEEEEe-----------------cCCCcceeeEEEE
Confidence 5775 55544 2235777775 2222 1344
Q ss_pred CCCCccccceeEcCC---CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccC
Q 005093 257 TESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 333 (715)
Q Consensus 257 t~~~~~~~~~~~spd---g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~ 333 (715)
..+...+..++|+|| |+.|+..+.+. .|.++|+.++...... .+... . .+..
T Consensus 203 ~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~-------~~~~~---~----~~~~ 257 (379)
T 3jrp_A 203 EGHSDWVRDVAWSPTVLLRSYLASVSQDR-----------TCIIWTQDNEQGPWKK-------TLLKE---E----KFPD 257 (379)
T ss_dssp CCCSSCEEEEEECCCCSSSEEEEEEETTS-----------CEEEEEESSTTSCCEE-------EESSS---S----CCSS
T ss_pred ecccCcEeEEEECCCCCCCCeEEEEeCCC-----------EEEEEeCCCCCcccee-------eeecc---c----cCCC
Confidence 555667889999999 77777666542 3778887765421100 00000 0 0111
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 005093 334 SILSNPWLSDGCTMLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 334 ~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~ 364 (715)
.+..+.|+|||+.|+.. ..++...+|.++.
T Consensus 258 ~v~~~~~s~~g~~l~~~-~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 258 VLWRASWSLSGNVLALS-GGDNKVTLWKENL 287 (379)
T ss_dssp CEEEEEECSSSCCEEEE-ESSSSEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEe-cCCCcEEEEeCCC
Confidence 34567899999866544 4466677777764
No 374
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.84 E-value=1.5e-07 Score=97.04 Aligned_cols=240 Identities=8% Similarity=0.028 Sum_probs=134.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEec--CccccccccCCCcccceeecCC---CCeEEEEe
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV--PQTVHGSVYADGWFEGISWNSD---ETLIAYVA 115 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~wSpD---g~~la~~~ 115 (715)
+.+...+|||||+.++.....+ .......+| .+++...+... ...+ ..+.|+|+ |+.|+..+
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPI----------KCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCE----------EEEECTTCCTTTCCEEEEE
T ss_pred CceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcE----------EEEEEcCCCCCCceEEEec
Confidence 5689999999999888775431 111334455 44444433322 2222 79999999 67777653
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc--eEeecCCCCCCccceE----
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPKSLSVGQV---- 189 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~--~~~l~~~~~~~~~~~~---- 189 (715)
. ...|.+||+.+++ ...+ ......+..+
T Consensus 88 ~--------------------------------------------dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 88 F--------------------------------------------GGNLHIWNLEAPEMPVYSV--KGHKEIINAIDGIG 121 (357)
T ss_dssp T--------------------------------------------TSCEEEECTTSCSSCSEEE--CCCSSCEEEEEEES
T ss_pred C--------------------------------------------CCeEEEEeCCCCCccEEEE--EecccceEEEeecc
Confidence 2 2568999998776 3444 2233345555
Q ss_pred --EEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC--CceecCCCCc----
Q 005093 190 --VWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESIS---- 261 (715)
Q Consensus 190 --~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lt~~~~---- 261 (715)
+|+||++. |+... .+..|.++|+ ..+ ....+....+
T Consensus 122 ~~~~s~~~~~----l~~~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 122 GLGIGEGAPE----IVTGS---------------RDGTVKVWDP-----------------RQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp GGGCC-CCCE----EEEEE---------------TTSCEEEECT-----------------TSCSSCSEEECCCTTSCCC
T ss_pred ccccCCCccE----EEEEe---------------CCCeEEEEeC-----------------CCCCCcceeccccCCCCCC
Confidence 45789987 66554 2236888886 333 2344433222
Q ss_pred ccccee----EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCC
Q 005093 262 SAFFPR----FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 337 (715)
Q Consensus 262 ~~~~~~----~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 337 (715)
.+.... |+|+|+.|+..+.+. .|+++|+.+++...... ....+..
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~--------------------~~~~v~~ 214 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNG-----------DIKLFDLRNMALRWETN--------------------IKNGVCS 214 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTS-----------EEEEEETTTTEEEEEEE--------------------CSSCEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCC-----------eEEEEECccCceeeecC--------------------CCCceEE
Confidence 334444 899999888776542 48889987755321110 0113456
Q ss_pred Ccccc---CCCEEEEEeeeCCeeEEEEEECCCCcEE------EecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEe
Q 005093 338 NPWLS---DGCTMLLSSIWGSSQVIISVNVSSGELL------RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 408 (715)
Q Consensus 338 ~~~~~---dg~~l~~~~~~~~~~~l~~~d~~tg~~~------~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~ 408 (715)
+.|+| +++.++. ...++...+| |+.+++.. .+......+....|++++..++++.+.-. .|.+.+
T Consensus 215 ~~~~~~~~~~~~l~~-~~~dg~i~i~--d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd 288 (357)
T 3i2n_A 215 LEFDRKDISMNKLVA-TSLEGKFHVF--DMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG---GLHLWK 288 (357)
T ss_dssp EEESCSSSSCCEEEE-EESTTEEEEE--EEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS---EEEEEE
T ss_pred EEcCCCCCCCCEEEE-ECCCCeEEEE--eCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC---cEEEee
Confidence 67998 8875544 4545544555 44333211 11133333444577887765655554332 466666
Q ss_pred eccc
Q 005093 409 FVDK 412 (715)
Q Consensus 409 ~~~~ 412 (715)
+...
T Consensus 289 ~~~~ 292 (357)
T 3i2n_A 289 YEYP 292 (357)
T ss_dssp EECC
T ss_pred cCCC
Confidence 6543
No 375
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.83 E-value=4.3e-06 Score=87.71 Aligned_cols=261 Identities=13% Similarity=0.075 Sum_probs=140.2
Q ss_pred ccccceEEeeCC-CCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCC---eEEEE
Q 005093 41 EMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDET---LIAYV 114 (715)
Q Consensus 41 ~~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~---~la~~ 114 (715)
..+.+...+|+| +++.|+.....+ ...+| .+++........... ..+.|+|++. .|+..
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 162 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDK-----TLKVWDTNTLQTADVFNFEETV----------YSHHMSPVSTKHCLVAVG 162 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTS-----EEEEEETTTTEEEEEEECSSCE----------EEEEECSSCSSCCEEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCC-----eEEEeeCCCCccceeccCCCce----------eeeEeecCCCCCcEEEEE
Confidence 336689999999 666666554332 34555 455555555443333 6788888543 55553
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecC
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spd 194 (715)
.. ...|.+||+.+++..... ......+..+.|+|+
T Consensus 163 ~~--------------------------------------------~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 163 TR--------------------------------------------GPKVQLCDLKSGSCSHIL-QGHRQEILAVSWSPR 197 (408)
T ss_dssp ES--------------------------------------------SSSEEEEESSSSCCCEEE-CCCCSCEEEEEECSS
T ss_pred cC--------------------------------------------CCeEEEEeCCCcceeeee-cCCCCcEEEEEECCC
Confidence 22 256999999887654331 334446778999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCe
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 274 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~ 274 (715)
++. +++++..+ ..|.++|+......-..+.....................+....|+|||+.
T Consensus 198 ~~~----ll~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 259 (408)
T 4a11_B 198 YDY----ILATASAD--------------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH 259 (408)
T ss_dssp CTT----EEEEEETT--------------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred CCc----EEEEEcCC--------------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE
Confidence 998 77776332 357777761000000000000000000001111334556788999999999
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccc-cCCCEEEEEeee
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIW 353 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~dg~~l~~~~~~ 353 (715)
|+..+.+. .|.++|+.+++.......... ... .....+.+. ..+..+++...
T Consensus 260 l~~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~~~~~~~~- 312 (408)
T 4a11_B 260 LLTVGTDN-----------RMRLWNSSNGENTLVNYGKVC---------NNS------KKGLKFTVSCGCSSEFVFVPY- 312 (408)
T ss_dssp EEEEETTS-----------CEEEEETTTCCBCCCCCCCCC---------CCC------SSCCCCEECCSSSSCEEEEEE-
T ss_pred EEEecCCC-----------eEEEEECCCCccceecccccc---------ccc------cccceeEEecCCCceEEEEec-
Confidence 98776552 488889887654322111000 000 001111121 22333444433
Q ss_pred CCeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 354 GSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 354 ~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+ ..+..+|+.+++...... ....+....|++++..|+....+ ..|.+.++.+.
T Consensus 313 ~--~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iw~~~~~ 366 (408)
T 4a11_B 313 G--STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD----CNILAWVPSLY 366 (408)
T ss_dssp T--TEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT----SCEEEEEECC-
T ss_pred C--CEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC----CeEEEEeCCCC
Confidence 3 367778988888666544 33345556788888776644322 24666666544
No 376
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.82 E-value=2.9e-09 Score=112.20 Aligned_cols=113 Identities=12% Similarity=0.037 Sum_probs=77.1
Q ss_pred CCCCcEEEEEcCCCCCCCCccchH-HHHHH-HhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSK-SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~-~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
+...|+||++||..... ...|.. ++..| +..+|.|+++|++| +|.+.......+ .....+++.+++++|.++.
T Consensus 66 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g---~g~s~y~~~~~~-~~~v~~~la~ll~~L~~~~ 140 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKS---GSRTAYSQASQN-VRIVGAEVAYLVGVLQSSF 140 (449)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHH---HHSSCHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCc---ccCCccHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence 34579999999955432 234554 44554 56799999999998 333211000000 0011346667777776443
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.++.+++.|+||||||.+|..++.++|+++++++++.|..
T Consensus 141 g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 141 DYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 3567899999999999999999999999999999888754
No 377
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.81 E-value=1.8e-08 Score=105.82 Aligned_cols=111 Identities=20% Similarity=0.214 Sum_probs=74.0
Q ss_pred CCCcEEEEEcCCCCCCCCccc--hHHHHHH-HhCCcEEEEEcCCCCCCCchhhhhc--C---CCCCC----ccchhhHHH
Q 005093 479 SCDPLIVVLHGGPHSVSLSSY--SKSLAFL-SSVGYSLLIVNYRGSLGFGEEALQS--L---PGKVG----SQDVNDVLT 546 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~--~~~~~~l-a~~G~~vi~~d~rG~~~~g~~~~~~--~---~~~~~----~~~~~d~~~ 546 (715)
...| ||++|||.+.... .+ ......+ .+.|+.|+++|+|| ||++.... . ..+.. ...++|+..
T Consensus 37 ~g~P-i~l~~Ggeg~~~~-~~~~~g~~~~lA~~~~~~Vi~~DhRg---~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~ 111 (446)
T 3n2z_B 37 NGGS-ILFYTGNEGDIIW-FCNNTGFMWDVAEELKAMLVFAEHRY---YGESLPFGDNSFKDSRHLNFLTSEQALADFAE 111 (446)
T ss_dssp TTCE-EEEEECCSSCHHH-HHHHCHHHHHHHHHHTEEEEEECCTT---STTCCTTGGGGGSCTTTSTTCSHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCcchh-hhhcccHHHHHHHHhCCcEEEEecCC---CCCCCCCCccccccchhhccCCHHHHHHHHHH
Confidence 3456 5667887765311 11 1223334 34589999999999 66653211 0 11222 223678888
Q ss_pred HHHHHHHcC-CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCc
Q 005093 547 AIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 594 (715)
Q Consensus 547 ~i~~l~~~~-~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 594 (715)
.++++.... .....++.++||||||.++++++.++|+++.++|+.+++
T Consensus 112 ~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 112 LIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp HHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 888887652 234468999999999999999999999999999987653
No 378
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.7e-07 Score=107.41 Aligned_cols=232 Identities=12% Similarity=0.119 Sum_probs=135.3
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCC--CCeEEEEeec
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEE 117 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~~~ 117 (715)
.+.+...+|||||++|+..... + ...+| .++....+..+. +..+ .+..+.|+|+ |+.|+..+.+
T Consensus 9 ~~~V~~l~~s~dg~~latg~~d--g---~I~vwd~~~~~~~~~~~l~-~h~~------~V~~l~~s~~~~~~~l~s~s~D 76 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSD--K---TIKIFEVEGETHKLIDTLT-GHEG------PVWRVDWAHPKFGTILASCSYD 76 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETT--T---EEEEEEEETTEEEEEEEEC-CCSS------CEEEEEECCTTSCSEEEEEETT
T ss_pred cceeEEEEECCCCCeEEEEECC--C---cEEEEecCCCCCccceecc-CCcC------ceEEEEecCCCCCCEEEEEeCC
Confidence 3678999999999999877554 2 33444 222222222221 1112 2378999998 8888775432
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec-CCCCCCccceEEEecC--
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL-- 194 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~-~~~~~~~~~~~~~spd-- 194 (715)
..|.+||+.+++...+. -......+..+.|+|+
T Consensus 77 --------------------------------------------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 112 (753)
T 3jro_A 77 --------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 112 (753)
T ss_dssp --------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred --------------------------------------------CeEEEEECCCCcccccccccCCCCCeEEEEECCCCC
Confidence 56999999998632221 0334456888999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC---CceecCCCCccccceeEcC-
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP- 270 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~~~~sp- 270 (715)
|+. ++..+ .+..|.++|+ ..+ ....+......+....|+|
T Consensus 113 ~~~----l~sgs---------------~dg~I~vwdl-----------------~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 113 GPL----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp CSE----EEEEE---------------TTSEEEEEEC-----------------CSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CCE----EEEEe---------------CCCcEEEEEe-----------------ecCCCcceeEeecCCCceEEEEecCc
Confidence 775 55544 2346778886 333 2334455666788899999
Q ss_pred ------------CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCC
Q 005093 271 ------------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 338 (715)
Q Consensus 271 ------------dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 338 (715)
||+.|+..+.+. .|.++|+.++.... ....... .+...+..+
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg-----------~I~iwd~~~~~~~~------~~~~~~~---------~h~~~V~~l 210 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLE---------GHSDWVRDV 210 (753)
T ss_dssp C---------CGGGCCEEEEETTS-----------CEEEEEEETTTTEE------EEEEEEC---------CCSSCEEEE
T ss_pred ccccccccccCCCCCEEEEEECCC-----------eEEEEeccCCcccc------eeeeeec---------CCCCcEEEE
Confidence 588887766553 37788876643210 0000000 011234567
Q ss_pred ccccC---CCEEEEEeeeCCeeEEEEEECCCCcE---EEecC---CCCCceeEEEeecCCEEEEE
Q 005093 339 PWLSD---GCTMLLSSIWGSSQVIISVNVSSGEL---LRITP---AESNFSWSLLTLDGDNIIAV 394 (715)
Q Consensus 339 ~~~~d---g~~l~~~~~~~~~~~l~~~d~~tg~~---~~l~~---~~~~~~~~~~s~~~~~l~~~ 394 (715)
.|+|+ ++ ++++...++...+| |+.+++. ..+.. ....+....|++++..++..
T Consensus 211 ~~sp~~~~~~-~l~s~s~Dg~I~iw--d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 211 AWSPTVLLRS-YLASVSQDRTCIIW--TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EECCCCSSSE-EEEEEESSSCEEEE--EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred EeccCCCCCC-EEEEEecCCEEEEe--cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 89999 65 55666656655555 5555431 11111 22233445788888766543
No 379
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.80 E-value=5.1e-09 Score=109.58 Aligned_cols=111 Identities=16% Similarity=0.205 Sum_probs=80.7
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCc---EEEEEcCCCCCCCchhh-------------hh-----c------
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEA-------------LQ-----S------ 531 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~---~vi~~d~rG~~~~g~~~-------------~~-----~------ 531 (715)
...|.||++||.+.. ...|..++..|+++|| .|+++|++| +|.+. .. .
T Consensus 20 ~~~ppVVLlHG~g~s--~~~w~~la~~La~~Gy~~~~Via~DlpG---~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~ 94 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGS--AGQFESQGMRFAANGYPAEYVKTFEYDT---ISWALVVETDMLFSGLGSEFGLNISQIIDPET 94 (484)
T ss_dssp -CCCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEEECCCH---HHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHH
T ss_pred CCCCEEEEECCCCCC--HHHHHHHHHHHHHcCCCcceEEEEECCC---CCcccccccccccccccccccccccccccccc
Confidence 456779999996554 5678889999999999 799999998 55430 00 0
Q ss_pred -----CCC--CCCccchhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCC---CceeEEEecCCcch
Q 005093 532 -----LPG--KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 596 (715)
Q Consensus 532 -----~~~--~~~~~~~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~~~~~ 596 (715)
... .......+++.+.++.+.+.. ..+++.|+||||||.+++.++.++| ++++++|+++|...
T Consensus 95 l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 95 LDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 000 001123567777777777763 3478999999999999999999887 48999999998654
No 380
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.79 E-value=1.7e-07 Score=99.88 Aligned_cols=150 Identities=13% Similarity=0.128 Sum_probs=89.7
Q ss_pred ceEEEEEccCCc----eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~g~----~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..|++||+.++. ...+ ......+..++|+|+++. ++.++.. ...|.++|+.
T Consensus 254 g~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~----~l~tg~~--------------dg~v~vwd~~----- 308 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEF----ILATGSA--------------DKTVALWDLR----- 308 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTT----EEEEEET--------------TSEEEEEETT-----
T ss_pred CeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCC----EEEEEeC--------------CCeEEEEeCC-----
Confidence 679999998763 2233 233446778999999998 7777632 2368888871
Q ss_pred hhhhhhhccCCC-CCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccc-eeee
Q 005093 238 ASELELKESSSE-DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK-IVDV 315 (715)
Q Consensus 238 ~~~~~~~~~~~~-~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~-~~~~ 315 (715)
. ......+......+....|+|+|+.++.+...+ ..|.++|+...+....... .+..
T Consensus 309 -----------~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 309 -----------NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp -----------CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred -----------CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC----------CcEEEEeCCCCccccCccccccCC
Confidence 2 233455666677789999999998766555443 2477888766332111000 0000
Q ss_pred eeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 316 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
..+... +. .+...+..+.|+|++..++++....+...+|.++
T Consensus 368 ~~~~~~-----~~-~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 368 PELLFI-----HG-GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTEEEE-----CC-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cceEEE-----cC-CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 000000 00 0112356778999998677777767766777664
No 381
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.79 E-value=4e-07 Score=92.45 Aligned_cols=231 Identities=9% Similarity=0.052 Sum_probs=122.7
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCC--CCeEEEEeec
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEE 117 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~~~ 117 (715)
.+.+...+|||||++||-.... + ...+| ..+....+..+. +..+. +..+.|+|+ |+.|+-.+.+
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D--~---~v~lwd~~~~~~~~~~~l~-gH~~~------V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSD--R---SVKIFDVRNGGQILIADLR-GHEGP------VWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETT--T---EEEEEEEETTEEEEEEEEE-CCSSC------EEEEEECCGGGSSCEEEEETT
T ss_pred cCeEEEeeEcCCCCEEEEEeCC--C---eEEEEEecCCCcEEEEEEc-CCCcc------EEEEEeCCCCCCCEEEEEECC
Confidence 3668999999999999876544 2 33444 233322222221 11122 278999874 7777765322
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce---EeecCCCCCCccceEEEecC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL 194 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~---~~l~~~~~~~~~~~~~~spd 194 (715)
..|.+||+.+++. ..+ ......+..++|+||
T Consensus 81 --------------------------------------------~~v~iWd~~~~~~~~~~~~--~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 81 --------------------------------------------RKVIIWREENGTWEKSHEH--AGHDSSVNSVCWAPH 114 (316)
T ss_dssp --------------------------------------------SCEEEECCSSSCCCEEEEE--CCCSSCCCEEEECCT
T ss_pred --------------------------------------------CEEEEEECCCCcceEEEEc--cCCCCceEEEEECCC
Confidence 5588999988742 223 223346778999998
Q ss_pred --CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-Cc---eecCCCCccccceeE
Q 005093 195 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PV---VNLTESISSAFFPRF 268 (715)
Q Consensus 195 --g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~lt~~~~~~~~~~~ 268 (715)
|.. |+..+ .+..|.++|+ .++ .. ..+..+...+....|
T Consensus 115 ~~g~~----lasgs---------------~D~~i~lwd~-----------------~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 115 DYGLI----LACGS---------------SDGAISLLTY-----------------TGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp TTCSC----EEEEC---------------SSSCEEEEEE-----------------CSSSCEEECCBTTSSSSCBCCCEE
T ss_pred CCCcE----EEEEc---------------CCCCEEEEec-----------------CCCCCcceeeeeccccCCcceEEE
Confidence 655 55443 2235666665 322 21 223334455778899
Q ss_pred cCCC-----------------CeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 269 SPDG-----------------KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 269 spdg-----------------~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
+|++ +.|+-.+.+ ..|.++|+.+++.... .. .+.+ +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----------~~v~lWd~~~~~~~~~-------~~--------~l~~-h 211 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCD-----------NLIKLWKEEEDGQWKE-------EQ--------KLEA-H 211 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTT-----------SBCCEEEECTTSCEEE-------EE--------CCBC-C
T ss_pred ccccCCccccccccccCccccceEEEecCC-----------CeEEEEEeCCCCccce-------ee--------eccc-C
Confidence 9984 444432222 2366666643221000 00 0000 1
Q ss_pred cCCCCCCccccCC---CEEEEEeeeCCeeEEEEEECCCC---c--EEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 332 SSSILSNPWLSDG---CTMLLSSIWGSSQVIISVNVSSG---E--LLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 332 ~~~~~~~~~~~dg---~~l~~~~~~~~~~~l~~~d~~tg---~--~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
...+..++|+|++ ..++++...++..+|| ++.++ + .+.+......+....|++++..|+...
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw--~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW--TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEE--ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEE--EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 1234567899986 2366666666655665 44431 1 122222223344467888877665443
No 382
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.78 E-value=3.4e-07 Score=92.40 Aligned_cols=270 Identities=14% Similarity=0.115 Sum_probs=146.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEec-CccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.+...+| |||++|+.....+ ...+| .+++....... ... +..+.|+|||+.|+....+..
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDG-----TVRLWSKDDQWLGTVVYTGQGF----------LNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTS-----EEEEEEESSSEEEEEEEECSSC----------EEEEEEETTTTEEEEEETTSC
T ss_pred CCcEEEEe-cCCCEEEEEEcCC-----cEEEEECCCCEEEEEeecCCcc----------EEEEEECCCCCEEEEecCCCe
Confidence 66888899 9999988765542 34455 34443333322 222 379999999999988765543
Q ss_pred CCCCCccCCCCCCCCC---CcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEec-CC
Q 005093 120 PSKPTFSLGSTKGGSS---DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LN 195 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~sp-dg 195 (715)
.. .+.......... ..........+.|.. ...+.......|.+|| .......+ ......+..+.|+| ++
T Consensus 83 i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~d~~i~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 83 IN--GVPLFATSGEDPLYTLIGHQGNVCSLSFQD--GVVISGSWDKTAKVWK-EGSLVYNL--QAHNASVWDAKVVSFSE 155 (313)
T ss_dssp EE--EEETTCCTTSCC-CEECCCSSCEEEEEEET--TEEEEEETTSEEEEEE-TTEEEEEE--ECCSSCEEEEEEEETTT
T ss_pred EE--EEEeeecCCCCcccchhhcccCEEEEEecC--CEEEEEeCCCCEEEEc-CCcEEEec--ccCCCceeEEEEccCCC
Confidence 21 111111111111 111111222233321 1122223347899999 23333344 23344677888988 77
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCe
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKF 274 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~ 274 (715)
+. ++... .+..|..+|. ......+.. ....+....|+|+|+
T Consensus 156 ~~----l~~~~---------------~d~~i~i~d~------------------~~~~~~~~~~~~~~i~~~~~~~~~~- 197 (313)
T 3odt_A 156 NK----FLTAS---------------ADKTIKLWQN------------------DKVIKTFSGIHNDVVRHLAVVDDGH- 197 (313)
T ss_dssp TE----EEEEE---------------TTSCEEEEET------------------TEEEEEECSSCSSCEEEEEEEETTE-
T ss_pred CE----EEEEE---------------CCCCEEEEec------------------CceEEEEeccCcccEEEEEEcCCCe-
Confidence 65 55443 2235777774 233334444 556788899999998
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeC
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 354 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~ 354 (715)
|+..+.+ ..|+++|+.+++...... . +...+..+.|+|++. ++ +...+
T Consensus 198 ~~~~~~d-----------g~i~i~d~~~~~~~~~~~----------~---------~~~~i~~~~~~~~~~-l~-~~~~d 245 (313)
T 3odt_A 198 FISCSND-----------GLIKLVDMHTGDVLRTYE----------G---------HESFVYCIKLLPNGD-IV-SCGED 245 (313)
T ss_dssp EEEEETT-----------SEEEEEETTTCCEEEEEE----------C---------CSSCEEEEEECTTSC-EE-EEETT
T ss_pred EEEccCC-----------CeEEEEECCchhhhhhhh----------c---------CCceEEEEEEecCCC-EE-EEecC
Confidence 6544433 258889987654311100 0 111345677999994 43 44433
Q ss_pred CeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 355 SSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 355 ~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
..|..+|+.+++...... ....+....|++++. ++. .+. -..|.+.++.++
T Consensus 246 --g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~---dg~i~iw~~~~~ 297 (313)
T 3odt_A 246 --RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-GSS---DNLVRIFSQEKS 297 (313)
T ss_dssp --SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE-EET---TSCEEEEESCGG
T ss_pred --CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE-EeC---CCcEEEEeCCCC
Confidence 357777888887665443 333444557788876 333 222 234666666544
No 383
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.78 E-value=4e-09 Score=111.12 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=75.0
Q ss_pred CCCCcEEEEEcCCCCCCCCccchH-HHHHHHh-CCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcC
Q 005093 478 CSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 555 (715)
Q Consensus 478 ~~~~P~vv~iHGg~~~~~~~~~~~-~~~~la~-~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 555 (715)
+...|+||++||..... ...|.. +...|.+ .+|.|+++|++|. |.+...... .......+++.+++++|.++.
T Consensus 67 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~---g~s~y~~~~-~~~~~~a~~l~~ll~~L~~~~ 141 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKG---SQTSYTQAA-NNVRVVGAQVAQMLSMLSANY 141 (450)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHH---HSSCHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccc---cCCcchHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 34579999999955432 224554 4455544 5899999999983 322100000 000111456667777776443
Q ss_pred CCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 556 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 556 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.++.+++.|+||||||.+|..++.++|+ +.+++++.|..
T Consensus 142 g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 142 SYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 3567899999999999999999999998 99999887754
No 384
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.78 E-value=1.6e-06 Score=89.00 Aligned_cols=128 Identities=13% Similarity=0.106 Sum_probs=72.4
Q ss_pred ceeEc-CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccC
Q 005093 265 FPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 343 (715)
Q Consensus 265 ~~~~s-pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 343 (715)
.+.|. +||+ ++|.+.. .++|++|+.++....+. ... +... ...+.+-.| .+...+..+++
T Consensus 230 ~~~~~~~dG~-~~~vs~~-----------g~V~v~d~~~~~~~v~~-~~~-~~~~-~~~~~g~~p----~g~q~~a~~~~ 290 (386)
T 3sjl_D 230 HPAYSQKAGR-LVWPTYT-----------GKIHQIDLSSGDAKFLP-AVE-ALTE-AERADGWRP----GGWQQVAYHRA 290 (386)
T ss_dssp CCEEETTTTE-EEEEBTT-----------SEEEEEECTTSSCEECC-CEE-SSCH-HHHHTTEEE----CSSSCEEEETT
T ss_pred cceeEcCCCc-EEEEeCC-----------CEEEEEECCCCcceeec-cee-cccc-ccccccccC----CCcceeeECCC
Confidence 36775 6774 7777753 25999998775532111 000 0000 000000011 13345667889
Q ss_pred CCEEEEEeeeC-------CeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 344 GCTMLLSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 344 g~~l~~~~~~~-------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
++++|+....+ ...+++.+|++|+++..-...........+++|++.++++... ....|.++|..+++
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~k 365 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESGE 365 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET--TTTEEEEEETTTCC
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC--CCCeEEEEECCCCc
Confidence 99998876532 3478999999998876543322223346789998744444432 34468888876553
No 385
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.78 E-value=7.5e-07 Score=93.60 Aligned_cols=232 Identities=13% Similarity=0.058 Sum_probs=125.8
Q ss_pred cccceEEeeCC-CCceEEEEecCCCCCCeEEEEecCCccEEEEecCc----cccccccCCCcccceeecC-CCCeEEEEe
Q 005093 42 MTGASAVVPSP-SGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQ----TVHGSVYADGWFEGISWNS-DETLIAYVA 115 (715)
Q Consensus 42 ~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~wSp-Dg~~la~~~ 115 (715)
.+.+...+||| ||+.||..... +.-.+|.+. +++......... .....-.....+..+.|+| +++.|+..+
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSD--GVIVLYDLE-NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETT--SCEEEEECC-CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred CCcEEEEEEecCCCCEEEEEcCC--CeEEEEECC-CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 36789999999 99999877554 322333332 222221111000 0000000112347999999 555555532
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCC
Q 005093 116 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 195 (715)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg 195 (715)
. ...|.+||+.+++.... ...........|+|.+
T Consensus 120 ~--------------------------------------------d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~ 153 (408)
T 4a11_B 120 F--------------------------------------------DKTLKVWDTNTLQTADV--FNFEETVYSHHMSPVS 153 (408)
T ss_dssp T--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEECSSC
T ss_pred C--------------------------------------------CCeEEEeeCCCCcccee--ccCCCceeeeEeecCC
Confidence 1 26799999999887665 2334456678888854
Q ss_pred CCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeE
Q 005093 196 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l 275 (715)
.. ...++... ....|.++|+. .......+......+....|+|+|+++
T Consensus 154 ~~-~~~~~~~~---------------~~~~v~~~d~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (408)
T 4a11_B 154 TK-HCLVAVGT---------------RGPKVQLCDLK----------------SGSCSHILQGHRQEILAVSWSPRYDYI 201 (408)
T ss_dssp SS-CCEEEEEE---------------SSSSEEEEESS----------------SSCCCEEECCCCSCEEEEEECSSCTTE
T ss_pred CC-CcEEEEEc---------------CCCeEEEEeCC----------------CcceeeeecCCCCcEEEEEECCCCCcE
Confidence 41 00044433 23468888871 333455666667778899999999975
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCCCCCccc--ceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE--KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
+++...+ ..|.++|+.++....... ......... ...+. .+...+..+.|+|+++.++.. ..
T Consensus 202 l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~ 265 (408)
T 4a11_B 202 LATASAD----------SRVKLWDVRRASGCLITLDQHNGKKSQAV----ESANT-AHNGKVNGLCFTSDGLHLLTV-GT 265 (408)
T ss_dssp EEEEETT----------SCEEEEETTCSSCCSEECCTTTTCSCCCT----TTSSC-SCSSCEEEEEECTTSSEEEEE-ET
T ss_pred EEEEcCC----------CcEEEEECCCCCcccccccccccccceee----ccccc-cccCceeEEEEcCCCCEEEEe-cC
Confidence 5555443 247888887654211100 000000000 00000 112234567899999866544 33
Q ss_pred CCeeEEEEEECCCCcEEEe
Q 005093 354 GSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 354 ~~~~~l~~~d~~tg~~~~l 372 (715)
++ .|..+|+.+++....
T Consensus 266 dg--~i~vwd~~~~~~~~~ 282 (408)
T 4a11_B 266 DN--RMRLWNSSNGENTLV 282 (408)
T ss_dssp TS--CEEEEETTTCCBCCC
T ss_pred CC--eEEEEECCCCcccee
Confidence 33 466678877765443
No 386
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.77 E-value=6.5e-07 Score=90.00 Aligned_cols=232 Identities=10% Similarity=0.103 Sum_probs=126.3
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCC--CceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTV 89 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 89 (715)
....+.++++.+...+.. ..+..+.+.+...+|||+ |+.||-.+.++ ...+| .+++...+.... ..
T Consensus 29 ~D~~v~iw~~~~~~~~~~----~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~~-~h 98 (297)
T 2pm7_B 29 SDKTIKIFEVEGETHKLI----DTLTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVMIWKEENGRWSQIAVHA-VH 98 (297)
T ss_dssp TTSCEEEEEBCSSCBCCC----EEECCCSSCEEEEEECCGGGCSEEEEEETTT-----EEEEEEBSSSCBCCCEEEC-CC
T ss_pred CCCEEEEEecCCCCcEEE----EEEccccCCeEEEEecCCCcCCEEEEEcCCC-----EEEEEEcCCCceEEEEEee-cC
Confidence 445566666764322111 112233467899999975 88887665542 34566 333322222111 11
Q ss_pred cccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEE
Q 005093 90 HGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVI 167 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (715)
. ..+..+.|+|+ |+.|+..+. ...|.+|
T Consensus 99 ~------~~v~~v~~~p~~~g~~l~s~s~--------------------------------------------d~~v~~w 128 (297)
T 2pm7_B 99 S------ASVNSVQWAPHEYGPMLLVASS--------------------------------------------DGKVSVV 128 (297)
T ss_dssp S------SCEEEEEECCGGGCSEEEEEET--------------------------------------------TSEEEEE
T ss_pred C------CceeEEEeCcCCCCcEEEEEEC--------------------------------------------CCcEEEE
Confidence 1 12378999998 777766432 2568889
Q ss_pred EccCCc---eEeecCCCCCCccceEEEecCC-------------CCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 168 NINSGE---VQAVKGIPKSLSVGQVVWAPLN-------------EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 168 ~~~~g~---~~~l~~~~~~~~~~~~~~spdg-------------~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
|+.++. ...+ ......+..+.|+|++ +. |+..+ .+..|.++|+
T Consensus 129 d~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~----l~sgs---------------~D~~v~lwd~ 187 (297)
T 2pm7_B 129 EFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG---------------ADNLVKIWKY 187 (297)
T ss_dssp EBCSSSCBCCEEE--ECCSSCEEEEEECCCC------------CCE----EEEEE---------------TTSCEEEEEE
T ss_pred EecCCCceeeeee--ecccCccceEeecCCcccccccCCCCCCcce----EEEEc---------------CCCcEEEEEE
Confidence 987653 2223 2233456788999974 33 44332 2224555565
Q ss_pred ccccchhhhhhhhccCCCCCC-----ceecCCCCccccceeEcCCC---CeEEEEecCCCCCCCCccccceeEeeecCCC
Q 005093 232 SLYKSEASELELKESSSEDLP-----VVNLTESISSAFFPRFSPDG---KFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 303 (715)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~~~~~~~~spdg---~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 303 (715)
.++. ...+..+...+...+|||++ +.|+-.+.+. .|.++|+.+.
T Consensus 188 -----------------~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~-----------~v~iWd~~~~ 239 (297)
T 2pm7_B 188 -----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR-----------TCIIWTQDNE 239 (297)
T ss_dssp -----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----------CEEEEEESST
T ss_pred -----------------cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-----------cEEEEEeCCC
Confidence 2222 23456667778999999996 6666555542 3677776653
Q ss_pred CCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 005093 304 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 370 (715)
Q Consensus 304 ~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 370 (715)
..... ..+... .. +...+..++|+|||+.| ++...++..+||..+.. |...
T Consensus 240 ~~~~~-------~~~~~~---~~----~~~~v~~~~~s~~g~~l-as~~~D~~v~lw~~~~~-g~w~ 290 (297)
T 2pm7_B 240 QGPWK-------KTLLKE---EK----FPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENLE-GKWE 290 (297)
T ss_dssp TSCCE-------EEESSS---SC----CSSCEEEEEECSSSCCE-EEEETTSCEEEEEECTT-SCEE
T ss_pred CCccc-------eeeeec---cc----CCCcEEEEEECCCCCEE-EEEcCCCcEEEEEECCC-CcEE
Confidence 21100 000000 00 11134467899999855 55555677788877653 4433
No 387
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.75 E-value=6.2e-07 Score=95.75 Aligned_cols=160 Identities=8% Similarity=0.099 Sum_probs=96.2
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEec---CCccEEEEecCc---cccccccCCCcccceeecCCC-CeEEEE
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQLEKEFHVPQ---TVHGSVYADGWFEGISWNSDE-TLIAYV 114 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~wSpDg-~~la~~ 114 (715)
...+...+|||||+.|+.. .. ....+|+ +++...+..... ..| ...+..+.|+|+| +.|+..
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEEL-----TEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGC-----CCCEEEEEECSSCTTEEEEE
T ss_pred CcceEEEEEcCCCCEEEEe-CC-----CeEEEEECCCCCceeeeeeccccccccc-----CcceEEEEECCCCCcEEEEE
Confidence 3568899999999998865 32 2345552 233333332110 011 1234799999999 666664
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce-----EeecCCCCCC-----
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-----QAVKGIPKSL----- 184 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~-----~~l~~~~~~~----- 184 (715)
+. ...|.+||+.+++. ..+. ....
T Consensus 246 ~~--------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~ 279 (447)
T 3dw8_B 246 SS--------------------------------------------KGTIRLCDMRASALCDRHSKLFE--EPEDPSNRS 279 (447)
T ss_dssp ET--------------------------------------------TSCEEEEETTTCSSSCTTCEEEC--CC-----CC
T ss_pred eC--------------------------------------------CCeEEEEECcCCccccceeeEec--cCCCccccc
Confidence 32 25699999988774 4442 2221
Q ss_pred -------ccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCC-CCCceec
Q 005093 185 -------SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-DLPVVNL 256 (715)
Q Consensus 185 -------~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 256 (715)
.+..+.|+|||+. |+... . ..|.++|+. . +.....+
T Consensus 280 ~~~~~~~~v~~~~~s~~g~~----l~~~~---------------~-~~v~iwd~~----------------~~~~~~~~~ 323 (447)
T 3dw8_B 280 FFSEIISSISDVKFSHSGRY----MMTRD---------------Y-LSVKVWDLN----------------MENRPVETY 323 (447)
T ss_dssp HHHHHTTCEEEEEECTTSSE----EEEEE---------------S-SEEEEEETT----------------CCSSCSCCE
T ss_pred cccccCceEEEEEECCCCCE----EEEee---------------C-CeEEEEeCC----------------CCcccccee
Confidence 5778999999997 66543 1 367788861 2 2223333
Q ss_pred CCCCcc---------------ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 257 TESISS---------------AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 257 t~~~~~---------------~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
...... .....|||||++|+..+.+ ..|+++|+.+++.
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----------g~v~iwd~~~~~~ 376 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----------NFFRMFDRNTKRD 376 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----------TEEEEEETTTCCE
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccC-----------CEEEEEEcCCCcc
Confidence 332211 1238999999998655544 2488888887654
No 388
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.74 E-value=1.2e-06 Score=89.46 Aligned_cols=211 Identities=15% Similarity=0.161 Sum_probs=112.9
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEecCC----ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
.+.+...+|||||+.||-.... +.-.+|.+.... ....+..+ .+..+ .+..+.|||||++|+..+.+
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D--~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~------~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFD--STVSIWAKEESADRTFEMDLLAII-EGHEN------EVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETT--SCEEEEEC-------CCCEEEEEE-C----------CEEEEEECTTSCEEEEEETT
T ss_pred cCCEEEEEECCCCCEEEEEeCC--CcEEEEEcccCcCccccceeEEEE-cCCCC------cEEEEEECCCCCEEEEEeCC
Confidence 3568999999999998876554 332333322110 11111111 11112 23789999999988875432
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-CCc----eEeecCCCCCCccceEEEe
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGE----VQAVKGIPKSLSVGQVVWA 192 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~g~----~~~l~~~~~~~~~~~~~~s 192 (715)
..|.+||+. +++ ...+ ......+..+.|+
T Consensus 129 --------------------------------------------~~v~iwd~~~~~~~~~~~~~~--~~h~~~v~~v~~~ 162 (330)
T 2hes_X 129 --------------------------------------------KSVWIWETDESGEEYECISVL--QEHSQDVKHVIWH 162 (330)
T ss_dssp --------------------------------------------SCEEEEECCTTCCCCEEEEEE--CCCSSCEEEEEEC
T ss_pred --------------------------------------------CEEEEEeccCCCCCeEEEEEe--ccCCCceEEEEEC
Confidence 558899984 322 2233 2333467789999
Q ss_pred cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC---CceecCCCCccccceeEc
Q 005093 193 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFS 269 (715)
Q Consensus 193 pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~~~~s 269 (715)
||++. |+..+ . +..|.++|+ ..+ ....+..+...+....|+
T Consensus 163 p~~~~----l~s~s-~--------------D~~i~iW~~-----------------~~~~~~~~~~~~~h~~~v~~~~~~ 206 (330)
T 2hes_X 163 PSEAL----LASSS-Y--------------DDTVRIWKD-----------------YDDDWECVAVLNGHEGTVWSSDFD 206 (330)
T ss_dssp SSSSE----EEEEE-T--------------TSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEEC
T ss_pred CCCCE----EEEEc-C--------------CCeEEEEEC-----------------CCCCeeEEEEccCCCCcEEEEEec
Confidence 99986 66554 1 124555554 222 234556666778889999
Q ss_pred CC--CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEE
Q 005093 270 PD--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 347 (715)
Q Consensus 270 pd--g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l 347 (715)
|+ +..|+-.+.+. .|.++++.++.... ......... +++.+...+..++|++++ +
T Consensus 207 ~~~~~~~l~s~s~D~-----------~v~iw~~~~~~~~~--~~~~~~~~~--------~~~~h~~~v~~v~~s~~~--~ 263 (330)
T 2hes_X 207 KTEGVFRLCSGSDDS-----------TVRVWKYMGDDEDD--QQEWVCEAI--------LPDVHKRQVYNVAWGFNG--L 263 (330)
T ss_dssp CSSSSCEEEEEETTS-----------CEEEEEEEEECTTS--CEEEEEEEE--------CCSCCSSCEEEEEECTTS--C
T ss_pred CCCCeeEEEEEeCCC-----------eEEEEEecCCCccc--cceeEEeee--------cccccccceEEEEEcCCC--E
Confidence 99 56666555442 36666665432110 000000000 001112234567788665 4
Q ss_pred EEEeeeCCeeEEEEEECCCCc
Q 005093 348 LLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 348 ~~~~~~~~~~~l~~~d~~tg~ 368 (715)
+++...++..+||.. .+++
T Consensus 264 l~s~~~dg~v~iw~~--~~~~ 282 (330)
T 2hes_X 264 IASVGADGVLAVYEE--VDGE 282 (330)
T ss_dssp EEEEETTSCEEEEEE--ETTE
T ss_pred EEEEeCCCEEEEEEc--CCCc
Confidence 455555666666654 4564
No 389
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.73 E-value=6e-07 Score=92.82 Aligned_cols=231 Identities=8% Similarity=0.017 Sum_probs=117.9
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+.+...+|||||+.||..... . +.+| ..++....... .+. ..+.|+++++.+++++....
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~-----~-~~iw~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~d~- 81 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK-----S-FEIYNVHPVAHIMSQEM-RHL----------SKVRMLHRTNYVAFVTGVKE- 81 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS-----E-EEEEEETTEEEEEEEEC-SCC----------CEEEECTTSSEEEEECSSTT-
T ss_pred CceEEEEECCCCCEEEEEcCC-----E-EEEEecCCcceeeeeec-CCe----------EEEEEcCCCCEEEEEECCcc-
Confidence 668999999999998865332 2 3456 22222211111 122 67889999988877654321
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC-ceEeecCCCCCCccceEEEecCCCCCc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g-~~~~l~~~~~~~~~~~~~~spdg~~~~ 199 (715)
....|.......... .........+.+.++ .+.......|++||+.++ +.... ... ......++| ..
T Consensus 82 ~v~iWd~~~~~~~~~-~~~~~~v~~v~~~~~---~~~~~~~~~i~i~d~~~~~~~~~~--~~~--~~~~~~~s~--~~-- 149 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSR-IKVDAPVKDLFLSRE---FIVVSYGDVISVFKFGNPWKRITD--DIR--FGGVCEFSN--GL-- 149 (355)
T ss_dssp EEEEEETTTTEEEEE-EECSSCEEEEEECSS---EEEEEETTEEEEEESSTTCCBSSC--CEE--EEEEEEEET--TE--
T ss_pred EEEEEECCCCcEEEE-EECCCceEEEEEcCC---EEEEEEcCEEEEEECCCCceeeEE--ecc--CCceEEEEc--cE--
Confidence 111222111100000 000111112222222 111112356777777665 22111 011 233445666 33
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-----------------ceecCCCCcc
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----------------VVNLTESISS 262 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~lt~~~~~ 262 (715)
+++.+. .....|.++|+ .++. ...+..+...
T Consensus 150 --la~~sg-------------~~~g~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~ 197 (355)
T 3vu4_A 150 --LVYSNE-------------FNLGQIHITKL-----------------QSSGSATTQDQGVQQKAILGKGVLIKAHTNP 197 (355)
T ss_dssp --EEEEES-------------SCTTCEEEEEC-----------------CC------------------CCEEECCCSSC
T ss_pred --EEEeCC-------------CcCcEEEEEEC-----------------CCCCccccccccccccccCcccEEEEccCCc
Confidence 565521 12235777776 3322 4566777778
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccce-eEeeecCCCCCCC-cccceeeeeeceecCCCCCccccccCCCCCCcc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDS-LHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 340 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~-l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 340 (715)
+...+|||||+.|+-.+.+. . +.++|+.+++... +.. |.+...+..++|
T Consensus 198 v~~~~~s~~g~~l~s~s~d~-----------~~v~iwd~~~~~~~~~~~~------------------g~h~~~v~~~~~ 248 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDG-----------TIIRVFKTEDGVLVREFRR------------------GLDRADVVDMKW 248 (355)
T ss_dssp EEEEEECTTSSEEEEEETTC-----------SEEEEEETTTCCEEEEEEC------------------TTCCSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCC-----------CEEEEEECCCCcEEEEEEc------------------CCCCCcEEEEEE
Confidence 89999999999888766552 4 7788887754311 110 001123557789
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCC
Q 005093 341 LSDGCTMLLSSIWGSSQVIISVNVSSG 367 (715)
Q Consensus 341 ~~dg~~l~~~~~~~~~~~l~~~d~~tg 367 (715)
+|||+.| ++...++..+|| |+..+
T Consensus 249 s~~~~~l-~s~s~d~~v~iw--~~~~~ 272 (355)
T 3vu4_A 249 STDGSKL-AVVSDKWTLHVF--EIFND 272 (355)
T ss_dssp CTTSCEE-EEEETTCEEEEE--ESSCC
T ss_pred CCCCCEE-EEEECCCEEEEE--EccCC
Confidence 9999855 455545544554 55443
No 390
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.72 E-value=5.5e-06 Score=90.58 Aligned_cols=248 Identities=10% Similarity=0.027 Sum_probs=137.2
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEec---CCccEEEEecCccccccccCCCcccceeec----CCCCeEEEEeec
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQLEKEFHVPQTVHGSVYADGWFEGISWN----SDETLIAYVAEE 117 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~wS----pDg~~la~~~~~ 117 (715)
...+++||||++|+... .+ + .+..++. +++....+...... ..+.+| |||++++.....
T Consensus 199 p~~v~~SpDGr~lyv~~-~d-g--~V~viD~~~~t~~~v~~i~~G~~P----------~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 199 VHISRLSASGRYLFVIG-RD-G--KVNMIDLWMKEPTTVAEIKIGSEA----------RSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp EEEEEECTTSCEEEEEE-TT-S--EEEEEETTSSSCCEEEEEECCSEE----------EEEEECCSTTCTTTEEEEEEEE
T ss_pred ccceEECCCCCEEEEEc-CC-C--eEEEEECCCCCCcEeEEEecCCCC----------ceeEEccccCCCCCEEEEEEcc
Confidence 45789999999876543 32 2 5666663 44444333332232 588999 799988776443
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC----------CCccc
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK----------SLSVG 187 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----------~~~~~ 187 (715)
. .++.++|..+.++.....+.+ ...+.
T Consensus 265 ~-------------------------------------------~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 265 P-------------------------------------------PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp T-------------------------------------------TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred C-------------------------------------------CeEEEEECCCCcEEEEEeccccccccccccCCCceE
Confidence 2 668888988877654311111 11234
Q ss_pred eEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC--CCCccccc
Q 005093 188 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT--ESISSAFF 265 (715)
Q Consensus 188 ~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt--~~~~~~~~ 265 (715)
.+..|+++.. +++... ....|+.+|. .......++ ........
T Consensus 302 ~i~~s~~~~~----~vv~~~--------------~~g~v~~vd~-----------------~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 302 AILASHYRPE----FIVNVK--------------ETGKILLVDY-----------------TDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp EEEECSSSSE----EEEEET--------------TTTEEEEEET-----------------TCSSEEEEEEEECCSSEEE
T ss_pred EEEEcCCCCE----EEEEec--------------CCCeEEEEec-----------------CCCccceeeeeeccccccC
Confidence 5667888776 555542 2247999996 322211111 11223456
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceec-CCCCCccccccCCCCCCc-cccC
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC-AEGDCFPGLYSSSILSNP-WLSD 343 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~d 343 (715)
..|+|||++++.+.+.+ ..|.++|+.+++.. ..+.. .. ...|| .... +.|+
T Consensus 347 ~~~~pdgr~~~va~~~s----------n~V~ViD~~t~kl~----------~~i~vgg~-~Phpg------~g~~~~~p~ 399 (567)
T 1qks_A 347 GGLDGSHRYFITAANAR----------NKLVVIDTKEGKLV----------AIEDTGGQ-TPHPG------RGANFVHPT 399 (567)
T ss_dssp EEECTTSCEEEEEEGGG----------TEEEEEETTTTEEE----------EEEECSSS-SBCCT------TCEEEEETT
T ss_pred ceECCCCCEEEEEeCCC----------CeEEEEECCCCcEE----------EEEeccCc-CCCCc------cceeeECCC
Confidence 78999999887666543 45999998875431 11111 11 01111 1222 3677
Q ss_pred CCEEEEEeeeCCeeEEEEEECCC-------CcE-EEecCCCCCceeEEEeecCCEEEEEEe-CCC--CCCeEEEEeeccc
Q 005093 344 GCTMLLSSIWGSSQVIISVNVSS-------GEL-LRITPAESNFSWSLLTLDGDNIIAVSS-SPV--DVPQVKYGYFVDK 412 (715)
Q Consensus 344 g~~l~~~~~~~~~~~l~~~d~~t-------g~~-~~l~~~~~~~~~~~~s~~~~~l~~~~~-~~~--~p~~l~~~~~~~~ 412 (715)
+..++++.. .+...+..+|.++ -+. +.+......-.....++++.++++... +++ ....|.++|+.+.
T Consensus 400 ~g~v~~t~~-~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 400 FGPVWATSH-MGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCcEEEeCC-CCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 776765544 3445678888876 223 444322111112456788887775431 221 1236888887644
No 391
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.72 E-value=7.1e-06 Score=82.80 Aligned_cols=244 Identities=14% Similarity=0.067 Sum_probs=142.7
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
....|||++ .||...+ ....+| .+|+..++...... .. .+..+.|+|||++|+..+.
T Consensus 29 ~~l~WS~~~-~lAvg~D------~tV~iWd~~tg~~~~~~~~~~~-~~------~V~~v~~~~~~~~l~sgs~------- 87 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQP-GE------YISSVAWIKEGNYLAVGTS------- 87 (318)
T ss_dssp BCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCST-TC------CEEEEEECTTSSEEEEEET-------
T ss_pred eEEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCC-CC------eEEEEEECCCCCEEEEEEC-------
Confidence 457899997 6775432 134567 56666666554221 11 2378999999998887532
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
...|.+|++++++..... .. .......++++++. ++
T Consensus 88 -------------------------------------Dg~v~iw~~~~~~~~~~~--~~-h~~~~~~~~~~~~~----l~ 123 (318)
T 4ggc_A 88 -------------------------------------SAEVQLWDVQQQKRLRNM--TS-HSARVGSLSWNSYI----LS 123 (318)
T ss_dssp -------------------------------------TSEEEEEETTTTEEEEEE--EC-CSSCEEEEEEETTE----EE
T ss_pred -------------------------------------CCcEEEeecCCceeEEEe--cC-ccceEEEeecCCCE----EE
Confidence 266999999998765431 11 12233467777774 44
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCC
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 283 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~ 283 (715)
... . ...+...+.. ........+...........|+++|+.|+..+.+.
T Consensus 124 s~~-~--------------~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~- 172 (318)
T 4ggc_A 124 SGS-R--------------SGHIHHHDVR---------------VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN- 172 (318)
T ss_dssp EEE-T--------------TSEEEEEETT---------------SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred EEe-c--------------CCceEeeecC---------------CCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-
Confidence 333 1 1234455531 01223344555566778889999999887666542
Q ss_pred CCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 005093 284 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 363 (715)
Q Consensus 284 ~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d 363 (715)
.|.++|+.+++.......... .....+....|++++..++..........+..+|
T Consensus 173 ----------~i~iwd~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 173 ----------LVNVWPSAPGEGGWVPLQTFT---------------QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp ----------CEEEEESSCBTTBSCCSEEEC---------------CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEE
T ss_pred ----------ceeEEECCCCcccccceeeec---------------ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEe
Confidence 377888877554221111000 0011233456777777676655544455677778
Q ss_pred CCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 364 VSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 364 ~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
..++...........+....++++++.++......+ ..|.+.++.++
T Consensus 228 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d--~~i~iwd~~~~ 274 (318)
T 4ggc_A 228 VCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPTM 274 (318)
T ss_dssp TTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTTC
T ss_pred cccccccccccceeeeeeeeecccccceEEEEEcCC--CEEEEEECCCC
Confidence 887777666555554555678888888876553332 23666665443
No 392
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.68 E-value=9.4e-07 Score=103.05 Aligned_cols=215 Identities=8% Similarity=0.079 Sum_probs=121.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
+.+...+|||||+.||.....+ ...+|.......+..... . ..+..+.|+| |++|+-.+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg-----~I~lw~~~~~~~~~~~~~--~------~~V~~l~fsp-g~~L~S~s~------ 77 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTG-----EVHIYGQQQVEVVIKLED--R------SAIKEMRFVK-GIYLVVINA------ 77 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTS-----EEEEECSTTCEEEEECSS--C------CCEEEEEEET-TTEEEEEET------
T ss_pred CCcEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEcCC--C------CCEEEEEEcC-CCEEEEEEC------
Confidence 5688999999999999776543 445663222222222221 1 1337999999 886665432
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
...|.+||+++++.... ......+..++|+|||+. |
T Consensus 78 --------------------------------------D~~v~lWd~~~~~~~~~--~~~~~~V~~v~~sp~g~~----l 113 (902)
T 2oaj_A 78 --------------------------------------KDTVYVLSLYSQKVLTT--VFVPGKITSIDTDASLDW----M 113 (902)
T ss_dssp --------------------------------------TCEEEEEETTTCSEEEE--EECSSCEEEEECCTTCSE----E
T ss_pred --------------------------------------cCeEEEEECCCCcEEEE--EcCCCCEEEEEECCCCCE----E
Confidence 26799999998875433 122345778999999996 6
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce------------ecCCCCccccceeEcC
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV------------NLTESISSAFFPRFSP 270 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~lt~~~~~~~~~~~sp 270 (715)
+... .+..|.++|+ .++... .+..+...+...+|+|
T Consensus 114 ~sgs---------------~dg~V~lwd~-----------------~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 114 LIGL---------------QNGSMIVYDI-----------------DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEE---------------TTSCEEEEET-----------------TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 5543 2236777786 333321 2233445688899999
Q ss_pred CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCCC--CccccccCCCCCCccccCCCEE
Q 005093 271 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGD--CFPGLYSSSILSNPWLSDGCTM 347 (715)
Q Consensus 271 dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~dg~~l 347 (715)
++..++.+...+ ..+ ++|+.+++... +.... +.-...... .....+...+..++|+|||+.|
T Consensus 162 ~~~~~l~~g~~d----------g~v-lWd~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l 226 (902)
T 2oaj_A 162 RDIGTVLISYEY----------VTL-TYSLVENEIKQSFIYEL----PPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI 226 (902)
T ss_dssp TEEEEEEEECSS----------CEE-EEETTTTEEEEEECCCB----CTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEE
T ss_pred CCCCEEEEEeCC----------CcE-EEECCCCceEEEEeccc----CCcCCCcccccccccccCCCeEEEEEcCCCCEE
Confidence 754444444332 247 88887754311 11000 000000000 0000011235577899999854
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEE
Q 005093 348 LLSSIWGSSQVIISVNVSSGELLR 371 (715)
Q Consensus 348 ~~~~~~~~~~~l~~~d~~tg~~~~ 371 (715)
++...++ .|..+|+.+++...
T Consensus 227 -asgs~Dg--~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 227 -ITIHEDN--SLVFWDANSGHMIM 247 (902)
T ss_dssp -EEEETTC--CEEEEETTTCCEEE
T ss_pred -EEEECCC--eEEEEECCCCcEEE
Confidence 4555444 45666888887654
No 393
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.65 E-value=3.7e-06 Score=89.07 Aligned_cols=247 Identities=11% Similarity=0.060 Sum_probs=139.6
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccc
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 93 (715)
..++++|+.++.. .++.. +..+...+...+|||||++||.....+ ...+| ..++..+.... ...
T Consensus 125 ~tV~lWd~~tg~~--~~~~~--~~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~~---h~~-- 190 (420)
T 4gga_A 125 NSVYLWSASSGDI--LQLLQ--MEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTS---HSA-- 190 (420)
T ss_dssp TEEEEEETTTCCE--EEEEE--CCSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC---CSS--
T ss_pred CEEEEEECCCCCE--EEEEE--ecCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeC---CCC--
Confidence 4566666765532 22211 111224589999999999998765543 34556 34433332221 111
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
....+++|++.|+..+. ...++++|.....
T Consensus 191 ------~v~~~s~~~~~l~sgs~--------------------------------------------d~~i~~~d~~~~~ 220 (420)
T 4gga_A 191 ------RVGSLSWNSYILSSGSR--------------------------------------------SGHIHHHDVRVAE 220 (420)
T ss_dssp ------CEEEEEEETTEEEEEET--------------------------------------------TSEEEEEETTSSS
T ss_pred ------ceEEEeeCCCEEEEEeC--------------------------------------------CCceeEeeecccc
Confidence 12344556666655322 2567888876544
Q ss_pred eE--eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 174 VQ--AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 174 ~~--~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
.. .+ ......+....|+|+|+. ++... .+..+.++++ ..+
T Consensus 221 ~~~~~~--~~h~~~~~~~~~~~~g~~----l~s~~---------------~D~~v~i~~~-----------------~~~ 262 (420)
T 4gga_A 221 HHVATL--SGHSQEVCGLRWAPDGRH----LASGG---------------NDNLVNVWPS-----------------APG 262 (420)
T ss_dssp CEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEES-----------------SCC
T ss_pred eeeEEe--cccccceeeeeecCCCCe----eeeee---------------ccccceEEee-----------------ccc
Confidence 32 23 223335667899999997 66554 2235666665 322
Q ss_pred C-----ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCC
Q 005093 252 P-----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 326 (715)
Q Consensus 252 ~-----~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~ 326 (715)
+ ..........+....|+|++..++.+.... ....|.++|+.++....... .
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs--------~D~~I~iwd~~t~~~~~~~~----------~----- 319 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT--------SDRHIRIWNVCSGACLSAVD----------A----- 319 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT--------TTCEEEEEETTTTEEEEEEE----------C-----
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeec--------CCCEEEEEeCCccccceeec----------c-----
Confidence 2 233444556688899999988877654321 12358888987754321100 0
Q ss_pred ccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe-cCCCCCceeEEEeecCCEEEE
Q 005093 327 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 327 ~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~~~~~l~~ 393 (715)
...+....|+++++.++..+. .....|..+|+.+++.... ......+....|++++..|+.
T Consensus 320 -----~~~v~~~~~~~~~~~lv~~sg-~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 320 -----HSQVCSILWSPHYKELISGHG-FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp -----SSCEEEEEEETTTTEEEEEEC-TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred -----ccceeeeeecCCCCeEEEEEe-cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 012345568999997766543 2234577778888776554 333344555678888876654
No 394
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.65 E-value=8.9e-07 Score=91.48 Aligned_cols=126 Identities=14% Similarity=0.054 Sum_probs=76.1
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCC----CceEEEEecCCCCCCeEEEEe--cCCccEEEEe-cCccc
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS----GSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQTV 89 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd----g~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~ 89 (715)
.|.++++.+... ...+.....+...+.+...+|||+ |+.|+.....+ ...+| ..++....+. ....
T Consensus 45 ~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~- 117 (366)
T 3k26_A 45 RVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYVGHGNA- 117 (366)
T ss_dssp EEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEESCCSC-
T ss_pred EEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeecCCCCc-
Confidence 566666765432 222322221122356889999999 56777665442 44555 4444444333 1222
Q ss_pred cccccCCCcccceeecC-CCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEE
Q 005093 90 HGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 168 (715)
Q Consensus 90 ~~~~~~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (715)
+..+.|+| +++.|+..+. ...|.+||
T Consensus 118 ---------i~~~~~~~~~~~~l~s~~~--------------------------------------------dg~i~iwd 144 (366)
T 3k26_A 118 ---------INELKFHPRDPNLLLSVSK--------------------------------------------DHALRLWN 144 (366)
T ss_dssp ---------EEEEEECSSCTTEEEEEET--------------------------------------------TSCEEEEE
T ss_pred ---------EEEEEECCCCCCEEEEEeC--------------------------------------------CCeEEEEE
Confidence 37999999 8887776532 25699999
Q ss_pred ccCCceEeecC--CCCCCccceEEEecCCCCCccEEEEEe
Q 005093 169 INSGEVQAVKG--IPKSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 169 ~~~g~~~~l~~--~~~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
+.+++...... ......+..+.|+|||+. |+...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~ 180 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEK----IMSCG 180 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSE----EEEEE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCE----EEEec
Confidence 99887655410 123446788999999987 66554
No 395
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.64 E-value=2.1e-06 Score=87.73 Aligned_cols=276 Identities=14% Similarity=0.108 Sum_probs=136.9
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (715)
.+..|.++|+......... ....+......+....|||||+.|+.....+ ...+| ..+...........
T Consensus 59 ~D~~i~vWd~~~~~~~~~~-~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~--- 129 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGI-PQRALRGHSHFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTK--- 129 (340)
T ss_dssp TTSCEEEEEECCSSSCSEE-EEEEECCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS---
T ss_pred CCCeEEEEECCCCCcccce-eeEEEeCCCCCEEEEEECCCCCEEEEEcccc-----cceEEeecccceeeeecCCCC---
Confidence 4445666667655422111 0111222336689999999999998765543 33344 23222222221111
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCC-CCCCcCCCCCCCCCcccCCcCccc--CCccCceEEEEE
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG-GSSDKDCNSWKGQGDWEEDWGETY--AGKRQPSLFVIN 168 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~l~~~~ 168 (715)
......++|+++.|+..+.+.... .+....... ...............+.++....+ .......|.+||
T Consensus 130 ------~~~~~~~~~~~~~l~s~s~d~~~~--~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 130 ------DVLSVAFSSDNRQIVSGSRDKTIK--LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp ------CEEEEEECTTSSCEEEEETTSCEE--EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred ------ceeEEEEeecCccceeecCCCeEE--EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 125778999999887765443221 111100000 000000111111222332211111 122346799999
Q ss_pred ccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCC
Q 005093 169 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 248 (715)
Q Consensus 169 ~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (715)
+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 202 ~~~~~~~~~~-~~h~~~v~~~~~s~~~~~----l~s~s---------------~Dg~i~iwd~----------------- 244 (340)
T 4aow_A 202 LANCKLKTNH-IGHTGYLNTVTVSPDGSL----CASGG---------------KDGQAMLWDL----------------- 244 (340)
T ss_dssp TTTTEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTCEEEEEET-----------------
T ss_pred CCCCceeeEe-cCCCCcEEEEEECCCCCE----EEEEe---------------CCCeEEEEEe-----------------
Confidence 9988765441 233446778999999986 66543 2236778886
Q ss_pred CCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcc
Q 005093 249 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 328 (715)
Q Consensus 249 ~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~ 328 (715)
.+............+....|+|++..++ .+.+ ..|.++|+.++......... ... ....
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d-----------~~i~iwd~~~~~~~~~~~~~--~~~-------~~~~ 303 (340)
T 4aow_A 245 NEGKHLYTLDGGDIINALCFSPNRYWLC-AATG-----------PSIKIWDLEGKIIVDELKQE--VIS-------TSSK 303 (340)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSSSEEE-EEET-----------TEEEEEETTTTEEEEEECCC----------------
T ss_pred ccCceeeeecCCceEEeeecCCCCceee-ccCC-----------CEEEEEECCCCeEEEecccc--cee-------eecc
Confidence 4444333333344577889999987554 3322 24788887764321100000 000 0000
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 005093 329 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 368 (715)
Q Consensus 329 g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~ 368 (715)
.+...+..++|+|||+.| ++...++..+|| |+.+|.
T Consensus 304 -~h~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW--~~~tGt 339 (340)
T 4aow_A 304 -AEPPQCTSLAWSADGQTL-FAGYTDNLVRVW--QVTIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSEE-EEEETTSCEEEE--EEEC--
T ss_pred -CCCCCEEEEEECCCCCEE-EEEeCCCEEEEE--eCCCcC
Confidence 011234567899999854 555555555555 555664
No 396
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.64 E-value=3.2e-08 Score=98.89 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=67.4
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+..|.||++||.+.. ...|..++..|. +.|+++|+++.. ....++++.+.+..++... ..
T Consensus 22 ~~~~~l~~~hg~~~~--~~~~~~~~~~L~---~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~ 81 (283)
T 3tjm_A 22 SSERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QP 81 (283)
T ss_dssp SSSCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTT-CC
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhcC---ceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHh-CC
Confidence 345678999996654 457777777775 999999996521 1123555555444444332 12
Q ss_pred CceEEEEEeChhHHHHHHHHhhC---CCcee---EEEecCCcc
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQA---PDKFV---AAAARNPLC 595 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~---p~~~~---~~v~~~~~~ 595 (715)
..++.|+||||||.+++.+|.+. |+++. +++++++..
T Consensus 82 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 82 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 36899999999999999998865 77888 888887643
No 397
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.63 E-value=1.8e-06 Score=87.64 Aligned_cols=237 Identities=11% Similarity=0.099 Sum_probs=126.9
Q ss_pred cceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCC--CceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcc
Q 005093 13 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQT 88 (715)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 88 (715)
.....+.++|+.++..... ..+..+.+.+...+|||+ |+.||-.+..+ ...+| ..++...+..+. +
T Consensus 32 s~D~~v~lwd~~~~~~~~~----~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~~-~ 101 (316)
T 3bg1_A 32 SSDRSVKIFDVRNGGQILI----ADLRGHEGPVWQVAWAHPMYGNILASCSYDR-----KVIIWREENGTWEKSHEHA-G 101 (316)
T ss_dssp ETTTEEEEEEEETTEEEEE----EEEECCSSCEEEEEECCGGGSSCEEEEETTS-----CEEEECCSSSCCCEEEEEC-C
T ss_pred eCCCeEEEEEecCCCcEEE----EEEcCCCccEEEEEeCCCCCCCEEEEEECCC-----EEEEEECCCCcceEEEEcc-C
Confidence 3455666767765432111 112233467899999874 88887665442 34556 333322222221 1
Q ss_pred ccccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEE
Q 005093 89 VHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 166 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 166 (715)
..+ .+..+.|+|| |+.|+..+. ...|.+
T Consensus 102 h~~------~V~~v~~~p~~~g~~lasgs~--------------------------------------------D~~i~l 131 (316)
T 3bg1_A 102 HDS------SVNSVCWAPHDYGLILACGSS--------------------------------------------DGAISL 131 (316)
T ss_dssp CSS------CCCEEEECCTTTCSCEEEECS--------------------------------------------SSCEEE
T ss_pred CCC------ceEEEEECCCCCCcEEEEEcC--------------------------------------------CCCEEE
Confidence 111 2379999998 666666432 256888
Q ss_pred EEccCCceEe-ec-CCCCCCccceEEEecCC-----------------CCCccEEEEEeecCccceeeeeeeecCCceEE
Q 005093 167 ININSGEVQA-VK-GIPKSLSVGQVVWAPLN-----------------EGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 227 (715)
Q Consensus 167 ~~~~~g~~~~-l~-~~~~~~~~~~~~~spdg-----------------~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~ 227 (715)
||+.++.... .. -......+..+.|+|++ +. |+..+ .+..|.
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sgs---------------~D~~v~ 192 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR----FASGG---------------CDNLIK 192 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB----EECCB---------------TTSBCC
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce----EEEec---------------CCCeEE
Confidence 9987763221 11 01223356678999984 22 33221 222455
Q ss_pred EEecccccchhhhhhhhccCCCCC---CceecCCCCccccceeEcCCC----CeEEEEecCCCCCCCCccccceeEeeec
Q 005093 228 AVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSPDG----KFLVFLSAKSSVDSGAHSATDSLHRIDW 300 (715)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~~~~spdg----~~l~~~~~~~~~~~g~~~~~~~l~~~~~ 300 (715)
++|+. ..+ ....+..+...+...+|+|++ +.|+-.+.+. .|.++++
T Consensus 193 lWd~~----------------~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~-----------~v~iw~~ 245 (316)
T 3bg1_A 193 LWKEE----------------EDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG-----------RVFIWTC 245 (316)
T ss_dssp EEEEC----------------TTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC-----------EEEEEEC
T ss_pred EEEeC----------------CCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC-----------eEEEEEc
Confidence 55541 222 233455566678899999997 6676555542 4777777
Q ss_pred CCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 301 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 301 ~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
.+......... ... .+...+..++|+|||+.| ++...++..+||..+.. |+...+
T Consensus 246 ~~~~~~~~~~~---~~~------------~~~~~v~~v~~sp~g~~l-as~~~D~~v~lw~~~~~-g~~~~~ 300 (316)
T 3bg1_A 246 DDASSNTWSPK---LLH------------KFNDVVWHVSWSITANIL-AVSGGDNKVTLWKESVD-GQWVCI 300 (316)
T ss_dssp SSTTCCCCBCC---EEE------------ECSSCEEEEEECTTTCCE-EEEESSSCEEEEEECTT-SCEEEE
T ss_pred cCccccchhhh---hhh------------cCCCcEEEEEEcCCCCEE-EEEcCCCeEEEEEECCC-CcEEEe
Confidence 65221000000 000 011234567899999854 55556677788877653 444433
No 398
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.62 E-value=2.8e-06 Score=92.92 Aligned_cols=240 Identities=8% Similarity=-0.021 Sum_probs=140.6
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
..+.|+.|...++|+.+.+ ...+..++ .+++....+...... ..+.+||||++|+.. ..
T Consensus 157 ~~~~~~~d~~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~p----------~~v~~SpDGr~lyv~-~~------- 216 (567)
T 1qks_A 157 TQQMNDWDLENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYAV----------HISRLSASGRYLFVI-GR------- 216 (567)
T ss_dssp SSCCSCCCGGGEEEEEETT--TTEEEEEETTTCCEEEEEECSSCE----------EEEEECTTSCEEEEE-ET-------
T ss_pred cccccccCCCceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCCc----------cceEECCCCCEEEEE-cC-------
Confidence 3456788877788887763 44788888 666665555544444 588999999987654 21
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc--CCceE-eecCCCCCCccceEEEe----cCCCC
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--SGEVQ-AVKGIPKSLSVGQVVWA----PLNEG 197 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~g~~~-~l~~~~~~~~~~~~~~s----pdg~~ 197 (715)
...|.++|+. +++.. .+ ........+.|| |||+.
T Consensus 217 ------------------------------------dg~V~viD~~~~t~~~v~~i---~~G~~P~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 217 ------------------------------------DGKVNMIDLWMKEPTTVAEI---KIGSEARSIETSKMEGWEDKY 257 (567)
T ss_dssp ------------------------------------TSEEEEEETTSSSCCEEEEE---ECCSEEEEEEECCSTTCTTTE
T ss_pred ------------------------------------CCeEEEEECCCCCCcEeEEE---ecCCCCceeEEccccCCCCCE
Confidence 1469999995 55443 33 223345688999 79996
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec-CCC-----------Cccccc
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TES-----------ISSAFF 265 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-t~~-----------~~~~~~ 265 (715)
++... . ....+.++|. .+.+.... ... ......
T Consensus 258 ----l~v~n-~-------------~~~~v~ViD~-----------------~t~~~~~~i~~~~~~~~~~~~~p~~rva~ 302 (567)
T 1qks_A 258 ----AIAGA-Y-------------WPPQYVIMDG-----------------ETLEPKKIQSTRGMTYDEQEYHPEPRVAA 302 (567)
T ss_dssp ----EEEEE-E-------------ETTEEEEEET-----------------TTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred ----EEEEE-c-------------cCCeEEEEEC-----------------CCCcEEEEEeccccccccccccCCCceEE
Confidence 55443 2 2236778886 44443322 111 112345
Q ss_pred eeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCC
Q 005093 266 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 345 (715)
Q Consensus 266 ~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~ 345 (715)
...|+++..+++.... ..+|+++|........++ .+ . .+.+ .....|++||+
T Consensus 303 i~~s~~~~~~vv~~~~----------~g~v~~vd~~~~~~~~v~-------~i-~---~~~~-------~~d~~~~pdgr 354 (567)
T 1qks_A 303 ILASHYRPEFIVNVKE----------TGKILLVDYTDLNNLKTT-------EI-S---AERF-------LHDGGLDGSHR 354 (567)
T ss_dssp EEECSSSSEEEEEETT----------TTEEEEEETTCSSEEEEE-------EE-E---CCSS-------EEEEEECTTSC
T ss_pred EEEcCCCCEEEEEecC----------CCeEEEEecCCCccceee-------ee-e---cccc-------ccCceECCCCC
Confidence 6678888766555433 236899997664321111 10 0 0111 12446999999
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEEEecCC-CC-Cc--eeEE-EeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 346 TMLLSSIWGSSQVIISVNVSSGELLRITPA-ES-NF--SWSL-LTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 346 ~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~-~~--~~~~-~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
+++..... ...|..+|++++++...... .. .+ .... +.++++.++++..-. ...|.+++..+
T Consensus 355 ~~~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~ 421 (567)
T 1qks_A 355 YFITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDP 421 (567)
T ss_dssp EEEEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EEEEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCC
Confidence 77765543 45688899999987765443 21 11 1222 456667776554322 23477777654
No 399
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.61 E-value=7.7e-06 Score=80.58 Aligned_cols=180 Identities=8% Similarity=-0.042 Sum_probs=109.4
Q ss_pred ceEEEEEccCCceEeecCCCCC-CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~-~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|++++++++....+ .... .....++++|++.. |+++.. ....|+++++
T Consensus 58 ~~I~~~~~~g~~~~~~--~~~~~~~p~~ia~d~~~~~----lyv~d~--------------~~~~I~~~~~--------- 108 (267)
T 1npe_A 58 PSIGRASLHGGEPTTI--IRQDLGSPEGIALDHLGRT----IFWTDS--------------QLDRIEVAKM--------- 108 (267)
T ss_dssp TEEEEEESSSCCCEEE--ECTTCCCEEEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CEEEEEecCCCCcEEE--EECCCCCccEEEEEecCCe----EEEEEC--------------CCCEEEEEEc---------
Confidence 6799999988766555 2222 34667889998876 666541 2247899986
Q ss_pred hhhhccCCCCCCceecCCC-CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 241 LELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 241 ~~~~~~~~~~~~~~~lt~~-~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
++...+.+... .......+++|++.+|+++.... ....|+++++++...+.+..
T Consensus 109 --------~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~--------~~~~I~~~~~dg~~~~~~~~--------- 163 (267)
T 1npe_A 109 --------DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR--------DNPKIETSHMDGTNRRILAQ--------- 163 (267)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS--------SSCEEEEEETTSCCCEEEEC---------
T ss_pred --------CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC--------CCcEEEEEecCCCCcEEEEE---------
Confidence 44443333322 23467788999988898876431 12468888876533211110
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 399 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~ 399 (715)
. ... .+..++++++++.||++.. +...|+++|++++..+.+..... .-..++.+++.++++....
T Consensus 164 -~--~~~-------~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~--~P~gi~~d~~~lyva~~~~- 228 (267)
T 1npe_A 164 -D--NLG-------LPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQ--YPFAVTSYGKNLYYTDWKT- 228 (267)
T ss_dssp -T--TCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCC--SEEEEEEETTEEEEEETTT-
T ss_pred -C--CCC-------CCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCC--CceEEEEeCCEEEEEECCC-
Confidence 0 000 2345678888888887654 34589999997666555543322 1234566778887755332
Q ss_pred CCCeEEEEeeccc
Q 005093 400 DVPQVKYGYFVDK 412 (715)
Q Consensus 400 ~p~~l~~~~~~~~ 412 (715)
.+|++++..++
T Consensus 229 --~~v~~~d~~~g 239 (267)
T 1npe_A 229 --NSVIAMDLAIS 239 (267)
T ss_dssp --TEEEEEETTTT
T ss_pred --CeEEEEeCCCC
Confidence 35888776543
No 400
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.61 E-value=9.7e-06 Score=85.27 Aligned_cols=221 Identities=11% Similarity=0.036 Sum_probs=124.9
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCC
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 120 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 120 (715)
+......+|+|+|+ | |+.+. ....++.++ .++....+....... . +.|+|+|+.|+.....
T Consensus 130 ~~~P~~la~d~~g~-l-yv~d~--~~~~I~~id~~~g~~~~~~~~~~~~----------~-ia~~~~g~~l~~~d~~--- 191 (409)
T 3hrp_A 130 FKYMWGIAAVGNNT-V-LAYQR--DDPRVRLISVDDNKVTTVHPGFKGG----------K-PAVTKDKQRVYSIGWE--- 191 (409)
T ss_dssp CCCEEEEEECSTTE-E-EEEET--TTTEEEEEETTTTEEEEEEETCCBC----------B-CEECTTSSEEEEEBSS---
T ss_pred cCCceEEEEeCCCC-E-EEEec--CCCcEEEEECCCCEEEEeeccCCCC----------c-eeEecCCCcEEEEecC---
Confidence 35677889999997 4 44443 334677777 556655554432222 4 9999999977664221
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE-eecC-CC-CCCccceEEEecCCCC
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKG-IP-KSLSVGQVVWAPLNEG 197 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~-~l~~-~~-~~~~~~~~~~spdg~~ 197 (715)
....|++++.+++... .+.. .. .......++++|++..
T Consensus 192 ---------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~ 232 (409)
T 3hrp_A 192 ---------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW 232 (409)
T ss_dssp ---------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE
T ss_pred ---------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe
Confidence 1137999999876542 2200 11 2234567899996665
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec----CCC-Cccc-c-ceeEcC
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----TES-ISSA-F-FPRFSP 270 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----t~~-~~~~-~-~~~~sp 270 (715)
|++.. ....|+++|+ +++....+ ... .... . ..+|+|
T Consensus 233 ----lyv~d---------------~~~~I~~~d~-----------------~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 233 ----LYFVD---------------SNKNFGRFNV-----------------KTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp ----EEEEC---------------TTCEEEEEET-----------------TTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred ----EEEEE---------------CCCcEEEEEC-----------------CCCCEEEEecccccCCCCCCccccEEEeC
Confidence 66632 1236999996 55554443 221 1222 3 789999
Q ss_pred CCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee-cCCCCCccccccCCCCCCccccCCCEEEE
Q 005093 271 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ-CAEGDCFPGLYSSSILSNPWLSDGCTMLL 349 (715)
Q Consensus 271 dg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~dg~~l~~ 349 (715)
++..|+++.... ..|++++.++. ...+.... ....... ......| ..+..++++++|+ ||+
T Consensus 277 ~~g~lyv~d~~~----------~~I~~~~~~g~-~~~~~g~~-~~~g~~dg~~~~~~~-----~~P~gia~d~dG~-lyv 338 (409)
T 3hrp_A 277 VDSNFYMSDQNL----------SSVYKITPDGE-CEWFCGSA-TQKTVQDGLREEALF-----AQPNGMTVDEDGN-FYI 338 (409)
T ss_dssp TTTEEEEEETTT----------TEEEEECTTCC-EEEEEECT-TCCSCBCEEGGGCBC-----SSEEEEEECTTCC-EEE
T ss_pred CCCEEEEEeCCC----------CEEEEEecCCC-EEEEEeCC-CCCCcCCCcccccEe-----CCCeEEEEeCCCC-EEE
Confidence 878887765442 36888886653 11110000 0000000 0000001 1234677899998 666
Q ss_pred EeeeC-CeeEEEEEECCCCcEEEecCC
Q 005093 350 SSIWG-SSQVIISVNVSSGELLRITPA 375 (715)
Q Consensus 350 ~~~~~-~~~~l~~~d~~tg~~~~l~~~ 375 (715)
+- . +..+|.++++.+|++..+...
T Consensus 339 ad--~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 339 VD--GFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp EE--TTTTCEEEEEETTTTEEEEEEEC
T ss_pred Ee--CCCCCEEEEEECCCCEEEEEeCC
Confidence 53 3 556899999878888777543
No 401
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.56 E-value=2.4e-06 Score=87.26 Aligned_cols=91 Identities=9% Similarity=0.048 Sum_probs=49.2
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCC--CCceEEEEecCCCCCCeEEEEecCCc-----c-EEEEec
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENESPIQFELWSQSQ-----L-EKEFHV 85 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~la~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~ 85 (715)
....|.++++.........+ ..+....+.+...+|+| ||+.|+..... +.-.+|.+..+.. . ..+...
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d--g~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 31 SDQHIKVFKLDKDTSNWELS--DSWRAHDSSIVAIDWASPEYGRIIASASYD--KTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp TTSEEEEEEECSSSCCEEEE--EEEECCSSCEEEEEECCGGGCSEEEEEETT--SCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred CCCeEEEEECCCCCCcceec--ceeccCCCcEEEEEEcCCCCCCEEEEEcCC--CeEEEEecCCCcccccccCcceeeee
Confidence 44567777777654321111 11222336789999999 69988876554 3333444332211 0 222222
Q ss_pred CccccccccCCCcccceeecCC--CCeEEEEe
Q 005093 86 PQTVHGSVYADGWFEGISWNSD--ETLIAYVA 115 (715)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~wSpD--g~~la~~~ 115 (715)
. ...+ .+..+.|+|+ ++.|+..+
T Consensus 107 ~-~~~~------~v~~~~~~~~~~~~~l~~~~ 131 (351)
T 3f3f_A 107 N-DSKG------SLYSVKFAPAHLGLKLACLG 131 (351)
T ss_dssp C-CCSS------CEEEEEECCGGGCSEEEEEE
T ss_pred c-ccCC------ceeEEEEcCCCCCcEEEEec
Confidence 1 1111 2378999999 88887753
No 402
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.56 E-value=1.2e-05 Score=81.93 Aligned_cols=200 Identities=12% Similarity=0.038 Sum_probs=109.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcc-ccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQT-VHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.+....|||+ .||-.... + ...+| ..+....+..+... ..+ .+..++|||||+.|+..+.+
T Consensus 15 ~~v~~~~~s~~--~las~~~D--~---~i~lw~~~~~~~~~~~~~~~~~h~~------~v~~v~~sp~~~~las~s~D-- 79 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTD--R---KIKLVSVKYDDFTLIDVLDETAHKK------AIRSVAWRPHTSLLAAGSFD-- 79 (330)
T ss_dssp SCEEEEEEETT--EEEEEESS--S---CEEEEECSSSCCEEEEEECTTCCCS------CEEEEEECTTSSEEEEEETT--
T ss_pred CceeeeccCCC--EEEEEcCC--C---EEEEEEecCCCeEEEEEEecCCccC------CEEEEEECCCCCEEEEEeCC--
Confidence 56788899998 56554433 2 23444 23222222222112 212 23789999999988775432
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc--------eEeecCCCCCCccceEEE
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE--------VQAVKGIPKSLSVGQVVW 191 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~~~~~~~~~~ 191 (715)
..|.+|+++++. ...+ ......+..++|
T Consensus 80 ------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~ 115 (330)
T 2hes_X 80 ------------------------------------------STVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAW 115 (330)
T ss_dssp ------------------------------------------SCEEEEEC-------CCCEEEEEE--C----CEEEEEE
T ss_pred ------------------------------------------CcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEE
Confidence 457777774321 1223 222345778999
Q ss_pred ecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC----CceecCCCCcccccee
Q 005093 192 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL----PVVNLTESISSAFFPR 267 (715)
Q Consensus 192 spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lt~~~~~~~~~~ 267 (715)
+|||+. |+..+ .+..|.++|+. ..+ ....+..+...+....
T Consensus 116 sp~g~~----las~s---------------~D~~v~iwd~~----------------~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 116 SNDGYY----LATCS---------------RDKSVWIWETD----------------ESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CTTSCE----EEEEE---------------TTSCEEEEECC----------------TTCCCCEEEEEECCCSSCEEEEE
T ss_pred CCCCCE----EEEEe---------------CCCEEEEEecc----------------CCCCCeEEEEEeccCCCceEEEE
Confidence 999997 66554 22356666751 121 1234555666788999
Q ss_pred EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCC-E
Q 005093 268 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC-T 346 (715)
Q Consensus 268 ~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~-~ 346 (715)
|+|||+.|+-.+.+. .|.++|..++....+ ... .+ +...+..+.|+|++. .
T Consensus 161 ~~p~~~~l~s~s~D~-----------~i~iW~~~~~~~~~~--------~~~--------~~-h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 161 WHPSEALLASSSYDD-----------TVRIWKDYDDDWECV--------AVL--------NG-HEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp ECSSSSEEEEEETTS-----------CEEEEEEETTEEEEE--------EEE--------CC-CSSCEEEEEECCSSSSC
T ss_pred ECCCCCEEEEEcCCC-----------eEEEEECCCCCeeEE--------EEc--------cC-CCCcEEEEEecCCCCee
Confidence 999999888766553 366666544321100 000 00 111334567888832 3
Q ss_pred EEEEeeeCCeeEEEEEEC
Q 005093 347 MLLSSIWGSSQVIISVNV 364 (715)
Q Consensus 347 l~~~~~~~~~~~l~~~d~ 364 (715)
.+++...++..+||.+..
T Consensus 213 ~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEETTSCEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEecC
Confidence 556666677777876653
No 403
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.56 E-value=5.2e-06 Score=86.59 Aligned_cols=204 Identities=13% Similarity=0.069 Sum_probs=114.7
Q ss_pred cccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEec--CccccccccCCCcccceeecC-CCCeEEEE
Q 005093 40 VEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV--PQTVHGSVYADGWFEGISWNS-DETLIAYV 114 (715)
Q Consensus 40 ~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~wSp-Dg~~la~~ 114 (715)
.+.+.+....|+|++...++....+ ....+| ..++....... ..+... .+..+.|+| +++.|+..
T Consensus 155 gh~~~v~~~~~~~~~~~~l~s~s~D----~~i~~wd~~~~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 155 GHKGYASSCQYVPDQETRLITGSGD----QTCVLWDVTTGQRISIFGSEFPSGHTA------DVLSLSINSLNANMFISG 224 (380)
T ss_dssp CCSSCCCCCBCCSSSSSCEEEECTT----SCEEEECTTTCCEEEEECCCSSSSCCS------CEEEEEECSSSCCEEEEE
T ss_pred CCCcceEEEEEecCCCCEEEEECCC----CcEEEEEcCCCcEEEEeecccCCCCcc------CeEEEEeecCCCCEEEEE
Confidence 3446677889999866544443332 234566 34444443321 112211 226788877 66666554
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC-Cc-eEeecCCCCCCccceEEEe
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-GE-VQAVKGIPKSLSVGQVVWA 192 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-g~-~~~l~~~~~~~~~~~~~~s 192 (715)
+. ...|.+||+.. ++ ...+ ......+..+.|+
T Consensus 225 s~--------------------------------------------D~~v~~wd~~~~~~~~~~~--~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 225 SC--------------------------------------------DTTVRLWDLRITSRAVRTY--HGHEGDINSVKFF 258 (380)
T ss_dssp ET--------------------------------------------TSCEEEEETTTTCCCCEEE--CCCSSCCCEEEEC
T ss_pred EC--------------------------------------------CCeEEEEECCCCCcceEEE--CCcCCCeEEEEEe
Confidence 22 25689999863 33 3344 2334467889999
Q ss_pred cCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCC-------Ccccc
Q 005093 193 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-------ISSAF 264 (715)
Q Consensus 193 pdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~-------~~~~~ 264 (715)
|||+. |+..+ .+..|.++|+ .++... .+... ...+.
T Consensus 259 p~~~~----l~s~s---------------~D~~i~lwd~-----------------~~~~~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 259 PDGQR----FGTGS---------------DDGTCRLFDM-----------------RTGHQLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp TTSSE----EEEEC---------------SSSCEEEEET-----------------TTTEEEEEECCCCSSSCCSSCSCS
T ss_pred cCCCe----EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEecccccccccccCceE
Confidence 99997 66554 2235777776 443322 22211 11367
Q ss_pred ceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCC
Q 005093 265 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 344 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg 344 (715)
..+|||||+.|+-.+.+ ..|+++|+.+++.... +.. ....+...+..++|+|||
T Consensus 303 ~~~~s~~g~~l~~g~~d-----------g~i~vwd~~~~~~~~~---------~~~------~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYSN-----------GDCYVWDTLLAEMVLN---------LGT------LQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp EEEECSSSSEEEEECTT-----------SCEEEEETTTCCEEEE---------ECC------SCSSCCCCCCEEEECSSS
T ss_pred EEEECCCCCEEEEEECC-----------CCEEEEECCCCceEEE---------Eec------ccCCCCCceEEEEECCCC
Confidence 78999999988755543 2488888766443110 000 000122245677899999
Q ss_pred CEEEEEeeeCCeeEEEEE
Q 005093 345 CTMLLSSIWGSSQVIISV 362 (715)
Q Consensus 345 ~~l~~~~~~~~~~~l~~~ 362 (715)
+. +++...++...||.+
T Consensus 357 ~~-l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 357 SA-LCTGSWDKNLKIWAF 373 (380)
T ss_dssp SE-EEEECTTSCEEEEEC
T ss_pred CE-EEEeeCCCCEEEEec
Confidence 84 456666665666643
No 404
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.56 E-value=1.8e-06 Score=98.93 Aligned_cols=229 Identities=10% Similarity=0.067 Sum_probs=130.4
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCC--CceEEEEecCCCCCCeEEEEecCCccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (715)
....|.++|+.++..... ..+..+.+.+...+|||+ |+.|+.....+ .-.+|.+ .+++...+.... ....
T Consensus 29 ~dg~I~vwd~~~~~~~~~----~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg--~I~vwd~-~~~~~~~~~~~~-~h~~ 100 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLI----DTLTGHEGPVWRVDWAHPKFGTILASCSYDG--KVLIWKE-ENGRWSQIAVHA-VHSA 100 (753)
T ss_dssp TTTEEEEEEEETTEEEEE----EEECCCSSCEEEEEECCTTSCSEEEEEETTS--CEEEEEE-ETTEEEEEEEEC-CCSS
T ss_pred CCCcEEEEecCCCCCccc----eeccCCcCceEEEEecCCCCCCEEEEEeCCC--eEEEEEC-CCCccccccccc-CCCC
Confidence 445666666764332111 112223367899999999 99888776542 2233332 344322222221 1111
Q ss_pred cccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEc
Q 005093 92 SVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 169 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 169 (715)
.+..+.|+|+ |+.|+..+. ...|.+||+
T Consensus 101 ------~V~~v~~sp~~~~~~l~sgs~--------------------------------------------dg~I~vwdl 130 (753)
T 3jro_A 101 ------SVNSVQWAPHEYGPLLLVASS--------------------------------------------DGKVSVVEF 130 (753)
T ss_dssp ------CEEEEEECCGGGCSEEEEEET--------------------------------------------TSEEEEEEC
T ss_pred ------CeEEEEECCCCCCCEEEEEeC--------------------------------------------CCcEEEEEe
Confidence 2379999999 888877532 266999999
Q ss_pred cCCce---EeecCCCCCCccceEEEec-------------CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccc
Q 005093 170 NSGEV---QAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 233 (715)
Q Consensus 170 ~~g~~---~~l~~~~~~~~~~~~~~sp-------------dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 233 (715)
.++.. ..+ ......+..+.|+| ||+. ++..+ .+..|.++|+
T Consensus 131 ~~~~~~~~~~~--~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~----l~sgs---------------~dg~I~iwd~-- 187 (753)
T 3jro_A 131 KENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG---------------ADNLVKIWKY-- 187 (753)
T ss_dssp CSSSCCCCEEE--ECCSSCEEEEEECCCC---------CGGGCC----EEEEE---------------TTSCEEEEEE--
T ss_pred ecCCCcceeEe--ecCCCceEEEEecCcccccccccccCCCCCE----EEEEE---------------CCCeEEEEec--
Confidence 87732 223 23344677889999 5776 66554 2235666665
Q ss_pred ccchhhhhhhhccCCCCC-----CceecCCCCccccceeEcCC---CCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 234 YKSEASELELKESSSEDL-----PVVNLTESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~-----~~~~lt~~~~~~~~~~~spd---g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
.++ ....+..+...+..++|+|+ |+.|+..+.+. .|.++|+.++..
T Consensus 188 ---------------~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----------~I~iwd~~~~~~ 241 (753)
T 3jro_A 188 ---------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----------TCIIWTQDNEQG 241 (753)
T ss_dssp ---------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----------CEEEEEESSSSS
T ss_pred ---------------cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----------EEEEecCCCCCC
Confidence 222 12344556677899999999 78777666542 378888877542
Q ss_pred CCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC
Q 005093 306 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 366 (715)
Q Consensus 306 ~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~t 366 (715)
.....-. .. . .+...+..++|+|||+.++ +...++...+| ++.+
T Consensus 242 ~~~~~~~-------~~---~----~~~~~v~~l~~spdg~~l~-s~s~Dg~I~vw--d~~~ 285 (753)
T 3jro_A 242 PWKKTLL-------KE---E----KFPDVLWRASWSLSGNVLA-LSGGDNKVTLW--KENL 285 (753)
T ss_dssp CCBCCBS-------SS---S----CCSSCCCCEEECTTTCCEE-EECSSSCEECC--BCCS
T ss_pred cceeEEe-------cc---C----CCCCceEEEEEcCCCCEEE-EEcCCCEEEEE--ecCC
Confidence 1111000 00 0 0122456788999998554 44445544444 5543
No 405
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.55 E-value=6.4e-06 Score=83.96 Aligned_cols=287 Identities=13% Similarity=-0.004 Sum_probs=150.1
Q ss_pred CccccccccccccceEEEEEEEeecCCCCccccccCCCcccccc-ceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCc
Q 005093 1 MFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTG-ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQ 78 (715)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~ 78 (715)
+|++.+..+..+ ...|-.+|.++..-. ..+-...-....+. .....+ ++.+|..+... ...+..++ .+++
T Consensus 4 ~~v~neg~~g~~--~~~l~~~d~~t~~~~-~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~---~~~v~viD~~t~~ 75 (328)
T 3dsm_A 4 LFITNEGNFQYS--NATLSYYDPATCEVE-NEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNN---SHVIFAIDINTFK 75 (328)
T ss_dssp EEEEECCCTTSC--CBEEEEEETTTTEEE-CSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGG---GTEEEEEETTTCC
T ss_pred EEEEecCCCCCC--CceEEEEECCCCEEh-hhhHhhhcCcccCccceEEEE--ECCEEEEEEcC---CCEEEEEECcccE
Confidence 356666666544 456666555544311 11100000001121 233344 56676555442 23577777 5566
Q ss_pred cEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCC
Q 005093 79 LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAG 158 (715)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 158 (715)
....+...... ..+.++||| +|+. +...
T Consensus 76 ~~~~i~~~~~p----------~~i~~~~~g-~lyv-~~~~---------------------------------------- 103 (328)
T 3dsm_A 76 EVGRITGFTSP----------RYIHFLSDE-KAYV-TQIW---------------------------------------- 103 (328)
T ss_dssp EEEEEECCSSE----------EEEEEEETT-EEEE-EEBS----------------------------------------
T ss_pred EEEEcCCCCCC----------cEEEEeCCC-eEEE-EECC----------------------------------------
Confidence 54433322222 688999998 5544 3311
Q ss_pred ccCceEEEEEccCCceEe-ecCCCCC----CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccc
Q 005093 159 KRQPSLFVININSGEVQA-VKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 233 (715)
Q Consensus 159 ~~~~~l~~~~~~~g~~~~-l~~~~~~----~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 233 (715)
...|+++|+++++... +. .... .....+.+ ++.+ ++.+.+. ....|+++|+
T Consensus 104 --~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~--~~~~----lyv~~~~-------------~~~~v~viD~-- 159 (328)
T 3dsm_A 104 --DYRIFIINPKTYEITGYIE-CPDMDMESGSTEQMVQ--YGKY----VYVNCWS-------------YQNRILKIDT-- 159 (328)
T ss_dssp --CSEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEE--ETTE----EEEEECT-------------TCCEEEEEET--
T ss_pred --CCeEEEEECCCCeEEEEEE-cCCccccCCCcceEEE--ECCE----EEEEcCC-------------CCCEEEEEEC--
Confidence 2679999999988653 31 1110 03445566 4554 5444310 1237999997
Q ss_pred ccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccccee
Q 005093 234 YKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 313 (715)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~ 313 (715)
++++...............++|||+ +++.................|+++|..+++...
T Consensus 160 ---------------~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~------ 217 (328)
T 3dsm_A 160 ---------------ETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK------ 217 (328)
T ss_dssp ---------------TTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE------
T ss_pred ---------------CCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEE------
Confidence 5555433222233456788999997 655654321000000112579999987754311
Q ss_pred eeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE--ecCC-CCCceeEEEeecCCE
Q 005093 314 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR--ITPA-ESNFSWSLLTLDGDN 390 (715)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~--l~~~-~~~~~~~~~s~~~~~ 390 (715)
.+.... + ..+..++++||++.+|+... .++.+|+++++... +... ........++++++.
T Consensus 218 ----~~~~~~-g-------~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~ 280 (328)
T 3dsm_A 218 ----QFKFKL-G-------DWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGE 280 (328)
T ss_dssp ----EEECCT-T-------CCCEEEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCC
T ss_pred ----EEecCC-C-------CCceeEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCe
Confidence 010000 0 02346789999998877543 79999999888632 1111 112233456776777
Q ss_pred EEEEE-eCCCCCCeEEEEeec
Q 005093 391 IIAVS-SSPVDVPQVKYGYFV 410 (715)
Q Consensus 391 l~~~~-~~~~~p~~l~~~~~~ 410 (715)
|+++. .+......|++++..
T Consensus 281 lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTT
T ss_pred EEEEcccccccCCEEEEECCC
Confidence 77664 223345678887765
No 406
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=2.9e-05 Score=80.38 Aligned_cols=255 Identities=13% Similarity=0.072 Sum_probs=129.8
Q ss_pred eeCCCCceEEEEecC-CCCCC-eEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 005093 49 VPSPSGSKLLVVRNP-ENESP-IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 125 (715)
Q Consensus 49 ~~Spdg~~la~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 125 (715)
..+||+++ +|+.+. +.+.. .++.++ .+++....+. .+. . ..+.+||||++|++........
T Consensus 27 ~~~~~~~~-~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~--~g~--------~-p~i~~spDg~~lyv~n~~~~~~---- 90 (373)
T 2mad_H 27 APGADGRR-SYINLPAHHSAIIQQWVLDAGSGSILGHVN--GGF--------L-PNPVAAHSGSEFALASTSFSRI---- 90 (373)
T ss_pred cCCCCCCE-EEEeCCcccCCccEEEEEECCCCeEEEEec--CCC--------C-CCeEECCCCCEEEEEecccccc----
Confidence 44689965 677665 32222 667777 5555443332 222 1 3899999999998864321000
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC--C----CCccceEEEecCCCCCc
Q 005093 126 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP--K----SLSVGQVVWAPLNEGLH 199 (715)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~----~~~~~~~~~spdg~~~~ 199 (715)
..|+ ....|.++|+++.++..-.... . ......+.|||||++
T Consensus 91 -------------------------~rg~-----~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~-- 138 (373)
T 2mad_H 91 -------------------------AKGK-----RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD-- 138 (373)
T ss_pred -------------------------ccCC-----CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE--
Confidence 0011 2367889999887654321011 0 123457899999998
Q ss_pred cEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEe
Q 005093 200 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 200 ~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~ 279 (715)
|++.... ....|+++| . .......+..-.+ .+.+.|+|+..++..
T Consensus 139 --l~v~n~~-------------~~~~v~viD-~----------------t~~~~~~~i~~~~---~~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 139 --LLFFQFA-------------AGPAVGLVV-Q----------------GGSSDDQLLSSPT---CYHIHPGAPSTFYLL 183 (373)
T ss_pred --EEEEecC-------------CCCeEEEEE-C----------------CCCEEeEEcCCCc---eEEEEeCCCceEEEE
Confidence 6665421 123688887 4 2222223022111 145667777665443
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
..+ ..+..+++ +++..... ...... ..... ....+.+++++..+++.+. . ..+
T Consensus 184 ~~d----------g~~~~vd~-~g~~~~~~----~~~~~~-~~~~p--------~~~~~~~~~~~~~~~~~~~-~--~~v 236 (373)
T 2mad_H 184 CAQ----------GGLAKTDH-AGGAAGAG----LVGAML-TAAQN--------LLTQPAQANKSGRIVWPVY-S--GKI 236 (373)
T ss_pred cCC----------CCEEEEEC-CCcEEEEE----eccccc-cCCcc--------eeecceeEecCCEEEEEcC-C--ceE
Confidence 332 23666666 44331000 000000 00000 0112345667776777653 2 378
Q ss_pred EEEECCCCcEEEecC-----C--------CCCceeEEEeecCCEEEEEEeCCC------CCCeEEEEeecccC
Q 005093 360 ISVNVSSGELLRITP-----A--------ESNFSWSLLTLDGDNIIAVSSSPV------DVPQVKYGYFVDKA 413 (715)
Q Consensus 360 ~~~d~~tg~~~~l~~-----~--------~~~~~~~~~s~~~~~l~~~~~~~~------~p~~l~~~~~~~~~ 413 (715)
+.+|+.++..+.+.. . ........++++++++|+...... ....|+++|+.+.+
T Consensus 237 ~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~ 309 (373)
T 2mad_H 237 LQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ 309 (373)
T ss_pred EEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE
Confidence 889987664332211 0 001122457788888887664321 23468888876543
No 407
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.55 E-value=2.9e-06 Score=87.14 Aligned_cols=258 Identities=13% Similarity=0.032 Sum_probs=136.7
Q ss_pred EEeeCCCCceEEEEecC------CCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 47 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.+++||||++|+..... +.....+..++ .+++....+.++...+- . ......++.+||||++|+......
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~-~-~g~~P~~ia~SpDGk~lyVan~~~- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF-S-VGPRVHIIGNCASSACLLFFLFGS- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC-C-BSCCTTSEEECTTSSCEEEEECSS-
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc-c-cCCCcceEEEcCCCCEEEEEccCC-
Confidence 78999999998765421 11223566666 56666665555411000 0 000126899999999987753221
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEE--EEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV--ININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
...+.+ +|+.+ ...+. ..+. +...|+|++
T Consensus 146 -----------------------------------------~~~v~V~~iD~~t--v~~i~-v~~~-----~~~~p~g~~ 176 (368)
T 1mda_H 146 -----------------------------------------SAAAGLSVPGASD--DQLTK-SASC-----FHIHPGAAA 176 (368)
T ss_dssp -----------------------------------------SCEEEEEETTTEE--EEEEE-CSSC-----CCCEEEETT
T ss_pred -----------------------------------------CCeEEEEEEchhh--ceEEE-CCCc-----eEEccCCCe
Confidence 145666 77776 44442 1111 234678887
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC-----CCcee-cCCCCccccceeEcCC
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-----LPVVN-LTESISSAFFPRFSPD 271 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-lt~~~~~~~~~~~spd 271 (715)
.++... ..+.+..+++ ++ ++... .+........|..+++
T Consensus 177 ----~~~~~~--------------~dg~~~~vd~-----------------~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 177 ----THYLGS--------------CPASLAASDL-----------------AAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp ----EEECCC--------------CTTSCEEEEC-----------------CSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred ----EEEEEc--------------CCCCEEEEEC-----------------ccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 655332 1224566775 32 22211 0000000122323888
Q ss_pred CCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCC-CccccccCCCCCCccccCCCEEEEE
Q 005093 272 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD-CFPGLYSSSILSNPWLSDGCTMLLS 350 (715)
Q Consensus 272 g~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~dg~~l~~~ 350 (715)
++.++|.+. . .++++|+.++....+ ..+...... ...+....+...+.+++|++++|+.
T Consensus 222 ~~~~~~vs~-~-----------~V~viD~~~~~~~v~--------~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 222 PGMLVWAVA-S-----------SILQGDIPAAGATMK--------AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp TTEEEECBS-S-----------CCEEEECCSSCCEEE--------CCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred CCEEEEEcC-C-----------EEEEEECCCCcceEE--------EEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 999999886 3 388899865432111 000000000 0000000122335689999988876
Q ss_pred eeeC-C-----eeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 005093 351 SIWG-S-----SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 413 (715)
Q Consensus 351 ~~~~-~-----~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~~ 413 (715)
.... + ...+..+|++++++..-...........+++|++.++++... ....|.++|+.+.+
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~--~~~~VsVID~~t~k 348 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA--GTEVLDIYDAASDQ 348 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET--TTTEEEEEESSSCE
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC--CCCeEEEEECCCCc
Confidence 5523 2 334558999998865543322222345788999888776651 13458888876543
No 408
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.54 E-value=2.3e-06 Score=89.76 Aligned_cols=197 Identities=15% Similarity=0.047 Sum_probs=86.4
Q ss_pred ceEEEEEccCCceE-eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~-~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|.+||+.++... .+ ......+..++|+|++.. ++.++..+ ..|.++|+..... ...
T Consensus 166 ~tv~~Wd~~~~~~~~~~--~~~~~~v~~v~~~p~~~~----~l~~~~~d--------------~~v~~wd~~t~~~-~~~ 224 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAG--YPLSSPGISVQFRPSNPN----QLIVGERN--------------GNIRIFDWTLNLS-AEE 224 (393)
T ss_dssp SEEEEEEEETTEEEEEE--EECSSCEEEEEEETTEEE----EEEEEETT--------------SEEEEEETTCCC-----
T ss_pred CeEEEEECCCCceeeee--cCCCCCcEEEEECCCCCc----eEEecCCC--------------CEEEEEECCCCcc-ccc
Confidence 67999999776543 33 233345678999999976 66655322 2455666510000 000
Q ss_pred hhhhccCC----------CCCCceecCCCCccccceeEc-CCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Cc
Q 005093 241 LELKESSS----------EDLPVVNLTESISSAFFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SS 308 (715)
Q Consensus 241 ~~~~~~~~----------~~~~~~~lt~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~l 308 (715)
........ ...................|+ |||+.|+-.+.+. .+.++|+.++... .+
T Consensus 225 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~-----------~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 225 NSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG-----------AWLRWNLFANNDYNEI 293 (393)
T ss_dssp ------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS-----------EEEEEEC---------
T ss_pred ccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC-----------CEEEEECccCCCCceE
Confidence 00000000 000000111223345566775 8999887665442 4667777654431 11
Q ss_pred ccceeeeeeceecCCCCCccccc-cCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEEe-cCCCCCceeEEEe
Q 005093 309 LEKIVDVIPVVQCAEGDCFPGLY-SSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLT 385 (715)
Q Consensus 309 t~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~-dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s 385 (715)
......+ ..... .....+.- ........|.+ .++.++.+...++ .+..+|..+++.... ......+....|+
T Consensus 294 ~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg--~V~lwd~~~~~~~~~~~~~~~~V~svafs 368 (393)
T 4gq1_A 294 SDSTMKL-GPKNL--LPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG--LIQLINTYEKDSNSIPIQLGMPIVDFCWH 368 (393)
T ss_dssp -----------CC--SCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT--EEEEEETTCTTCCEEEEECSSCEEEEEEC
T ss_pred eeecCcc-ccEEE--ccccccccccCcceeEEEccCCCCEEEEEECCCC--EEEEEECCCCcEEEEecCCCCcEEEEEEc
Confidence 1111000 00000 00000000 00112233433 3444555544444 556668877765443 3333345556899
Q ss_pred ecCCEEEEEE
Q 005093 386 LDGDNIIAVS 395 (715)
Q Consensus 386 ~~~~~l~~~~ 395 (715)
++|+.|+...
T Consensus 369 pdG~~LA~as 378 (393)
T 4gq1_A 369 QDGSHLAIAT 378 (393)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999887654
No 409
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.53 E-value=2.4e-05 Score=76.96 Aligned_cols=232 Identities=9% Similarity=0.084 Sum_probs=134.1
Q ss_pred EEEEEEEeecCCCCccccccCC-CccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 16 KFMLSTVISKENENSVTFQWAP-FPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
..|+.+++++... .++...+ +.........++|+|+++.|+++.. ....++.+. .++....+.... .
T Consensus 10 ~~I~~~~~~g~~~--~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~~--~---- 78 (267)
T 1npe_A 10 GKIERLPLERNTM--KKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI---SEPSIGRASLHGGEPTTIIRQD--L---- 78 (267)
T ss_dssp EEEEEEEESSSCB--CGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET---TTTEEEEEESSSCCCEEEECTT--C----
T ss_pred CeEEEEEecCccc--ccccceeeecCCCCcEEEEEEecCCCEEEEEEC---CCCEEEEEecCCCCcEEEEECC--C----
Confidence 3688888776543 1111011 1111234678899999998877644 334677777 444444333211 1
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
....++.++|++++|++... ....|+++++++..
T Consensus 79 ---~~p~~ia~d~~~~~lyv~d~-------------------------------------------~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 79 ---GSPEGIALDHLGRTIFWTDS-------------------------------------------QLDRIEVAKMDGTQ 112 (267)
T ss_dssp ---CCEEEEEEETTTTEEEEEET-------------------------------------------TTTEEEEEETTSCS
T ss_pred ---CCccEEEEEecCCeEEEEEC-------------------------------------------CCCEEEEEEcCCCC
Confidence 01268899999888876521 12678999998765
Q ss_pred eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc
Q 005093 174 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 253 (715)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (715)
.+.+. ...-.....++++|++.. |+++.... ....|+++++ ++...
T Consensus 113 ~~~~~-~~~~~~P~~i~vd~~~g~----lyv~~~~~------------~~~~I~~~~~-----------------dg~~~ 158 (267)
T 1npe_A 113 RRVLF-DTGLVNPRGIVTDPVRGN----LYWTDWNR------------DNPKIETSHM-----------------DGTNR 158 (267)
T ss_dssp CEEEE-CSSCSSEEEEEEETTTTE----EEEEECCS------------SSCEEEEEET-----------------TSCCC
T ss_pred EEEEE-ECCCCCccEEEEeeCCCE----EEEEECCC------------CCcEEEEEec-----------------CCCCc
Confidence 55442 112134567889998876 66654210 1247888886 44443
Q ss_pred eecC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccccc
Q 005093 254 VNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 332 (715)
Q Consensus 254 ~~lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~ 332 (715)
+.+. .........+++||+++|+++.... ..|+++++++...+.+ .. ....|
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~----------~~I~~~~~~g~~~~~~----------~~---~~~~P---- 211 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGT----------HRAECLNPAQPGRRKV----------LE---GLQYP---- 211 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTT----------TEEEEEETTEEEEEEE----------EE---CCCSE----
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCC----------CEEEEEecCCCceEEE----------ec---CCCCc----
Confidence 3332 2333567789999999998877553 4689999875322111 10 01111
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 333 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
.. ...|+..+|++.. +...|+++|.++|+....
T Consensus 212 ---~g--i~~d~~~lyva~~--~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 212 ---FA--VTSYGKNLYYTDW--KTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp ---EE--EEEETTEEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred ---eE--EEEeCCEEEEEEC--CCCeEEEEeCCCCCceEE
Confidence 12 2345666777433 335789999988876544
No 410
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.53 E-value=4.9e-06 Score=88.57 Aligned_cols=231 Identities=10% Similarity=0.024 Sum_probs=121.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcccccccc----CCCccccee--ecCCCCeEEEE
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVY----ADGWFEGIS--WNSDETLIAYV 114 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--wSpDg~~la~~ 114 (715)
+.+...+|+|+++.|+..... +.-.+|.+. ..++..+..... .++...+ ..+.+..+. |+||++.|+..
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~d--g~i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKD--GQIIVLKVNHYQQESEVKFLNCE-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SEEEEEEEEEEEETTEEEEEEEE-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeCC--CEEEEEEeccccCCceeeccccc-eeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 668999999999999876554 333455443 234333322211 1100000 001112333 66777766664
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCCCCCccceEEEec
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~~~~~~~~~~sp 193 (715)
+. ...|.+||+.+++... +........+..++|+|
T Consensus 189 ~~--------------------------------------------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~ 224 (437)
T 3gre_A 189 TN--------------------------------------------LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE 224 (437)
T ss_dssp ET--------------------------------------------TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT
T ss_pred eC--------------------------------------------CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC
Confidence 32 2679999998887644 32111334678899999
Q ss_pred CCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecC-CCCccccce----e
Q 005093 194 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAFFP----R 267 (715)
Q Consensus 194 dg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt-~~~~~~~~~----~ 267 (715)
||+. |+..+ .+..|.++|+ ..++. ..+. .....+... .
T Consensus 225 ~~~~----l~s~~---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 225 ECCV----LILGT---------------TRGIIDIWDI-----------------RFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp TSCE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred CCCE----EEEEc---------------CCCeEEEEEc-----------------CCccEEEEEecCCCCceEEEEeccc
Confidence 9986 66544 2236888887 44443 3332 334445555 6
Q ss_pred EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeeceecCCC------CCccc-cccCCCCCCc
Q 005093 268 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEG------DCFPG-LYSSSILSNP 339 (715)
Q Consensus 268 ~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~------~~~~g-~~~~~~~~~~ 339 (715)
|+|||+.|+-.+.+ ..|.++|+.+++... +......+ .......+ ..+.+ .+...+..++
T Consensus 269 ~s~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 269 YGKNSVIVVGGSSK-----------TFLTIWNFVKGHCQYAFINSDEQP-SMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp TCTTEEEEEEESTT-----------EEEEEEETTTTEEEEEEESSSSCC-CGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred cCCCccEEEEEcCC-----------CcEEEEEcCCCcEEEEEEcCCCCC-ccceecccccccccceecccccCCceEEEE
Confidence 66788777655443 248888887654311 11000000 00000000 00111 1222456778
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 340 WLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 340 ~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
|+ +++ ++++...++ .|..+|+.+++....
T Consensus 337 ~~-~~~-~l~s~~~d~--~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 337 VS-NDK-ILLTDEATS--SIVMFSLNELSSSKA 365 (437)
T ss_dssp EE-TTE-EEEEEGGGT--EEEEEETTCGGGCEE
T ss_pred EC-Cce-EEEecCCCC--eEEEEECCCcccceE
Confidence 88 665 555555444 677778888775443
No 411
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.50 E-value=1.2e-05 Score=86.30 Aligned_cols=157 Identities=10% Similarity=0.018 Sum_probs=86.7
Q ss_pred EEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC-CceecCCCCccccceeE
Q 005093 190 VWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRF 268 (715)
Q Consensus 190 ~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~ 268 (715)
.++|+++. ++... .+..|.++|+ .++ ....+......+....|
T Consensus 275 ~~~~~~~~----l~~~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~~~~v~~~~~ 318 (464)
T 3v7d_B 275 TVSGHGNI----VVSGS---------------YDNTLIVWDV-----------------AQMKCLYILSGHTDRIYSTIY 318 (464)
T ss_dssp EEEEETTE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEE
T ss_pred EEcCCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCEEEEEE
Confidence 45788876 55544 2346888887 444 34455556677889999
Q ss_pred cCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-------------------CcccceeeeeeceecCCCCC-cc
Q 005093 269 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-------------------SSLEKIVDVIPVVQCAEGDC-FP 328 (715)
Q Consensus 269 spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-------------------~lt~~~~~~~~~~~~~~~~~-~~ 328 (715)
+|||+.|+..+.+. .|.++|+.+++.. .++...+..+.+|+...... +.
T Consensus 319 ~~~~~~l~sg~~dg-----------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 319 DHERKRCISASMDT-----------TIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp ETTTTEEEEEETTS-----------CEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cCCCCEEEEEeCCC-----------cEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeee
Confidence 99999888666553 2555565543321 11222223344444333221 11
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeC
Q 005093 329 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 329 g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
...........|+++++.++. .. + ..+..+|+.+|+...............++.+++.+++..+.
T Consensus 388 ~~~~~~~~~~~~~~~~~~l~~-~~-d--g~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 388 YHHTNLSAITTFYVSDNILVS-GS-E--NQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp EECTTCCCEEEEEECSSEEEE-EE-T--TEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEE
T ss_pred ecCCCCccEEEEEeCCCEEEE-ec-C--CeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEe
Confidence 111122344578899885544 33 3 36777899899877632222212334455567777665544
No 412
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.50 E-value=1.1e-07 Score=82.47 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=55.3
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCCCc
Q 005093 481 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 560 (715)
Q Consensus 481 ~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d~~ 560 (715)
.|.||++| +. ...|... |+ ++|.|+++|+|| +|.+... .. . .+++.+.+..+++. .+.+
T Consensus 22 ~~~vv~~H-~~----~~~~~~~---l~-~~~~v~~~d~~G---~G~s~~~---~~--~--~~~~~~~~~~~~~~--~~~~ 80 (131)
T 2dst_A 22 GPPVLLVA-EE----ASRWPEA---LP-EGYAFYLLDLPG---YGRTEGP---RM--A--PEELAHFVAGFAVM--MNLG 80 (131)
T ss_dssp SSEEEEES-SS----GGGCCSC---CC-TTSEEEEECCTT---STTCCCC---CC--C--HHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEEc-CC----HHHHHHH---Hh-CCcEEEEECCCC---CCCCCCC---CC--C--HHHHHHHHHHHHHH--cCCC
Confidence 47899999 22 2223222 54 459999999999 5544211 11 1 55555555555554 2456
Q ss_pred eEEEEEeChhHHHHHHHHhhCCC
Q 005093 561 KVTVVGGSHGGFLTTHLIGQAPD 583 (715)
Q Consensus 561 ~i~l~G~S~GG~~a~~~a~~~p~ 583 (715)
++.++|||+||.+++.++.++|.
T Consensus 81 ~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 81 APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp SCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccEEEEEChHHHHHHHHHhcCCc
Confidence 89999999999999999999885
No 413
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.50 E-value=2.2e-06 Score=88.43 Aligned_cols=85 Identities=14% Similarity=0.134 Sum_probs=53.0
Q ss_pred ceEEEEEEEeecCCCCc-cccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCcccc
Q 005093 14 RKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVH 90 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 90 (715)
....|.++|+.+.+... ..+. .+.+.+...+|||||++|+.....+ ...+| .+++...+......+
T Consensus 62 ~dg~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~v- 130 (368)
T 3mmy_A 62 WANDVRCWEVQDSGQTIPKAQQ-----MHTGPVLDVCWSDDGSKVFTASCDK-----TAKMWDLSSNQAIQIAQHDAPV- 130 (368)
T ss_dssp TTSEEEEEEECTTSCEEEEEEE-----ECSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECSSCE-
T ss_pred CCCcEEEEEcCCCCceeEEEec-----cccCCEEEEEECcCCCEEEEEcCCC-----cEEEEEcCCCCceeeccccCce-
Confidence 44566777777644322 2222 2236789999999999998765543 34555 455544444333333
Q ss_pred ccccCCCcccceee--cCCCCeEEEEeecC
Q 005093 91 GSVYADGWFEGISW--NSDETLIAYVAEEP 118 (715)
Q Consensus 91 ~~~~~~~~~~~~~w--SpDg~~la~~~~~~ 118 (715)
..+.| +|+|+.|+..+.+.
T Consensus 131 ---------~~~~~~~~~~~~~l~~~~~dg 151 (368)
T 3mmy_A 131 ---------KTIHWIKAPNYSCVMTGSWDK 151 (368)
T ss_dssp ---------EEEEEEECSSCEEEEEEETTS
T ss_pred ---------EEEEEEeCCCCCEEEEccCCC
Confidence 78999 99998888766543
No 414
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.49 E-value=1.1e-05 Score=85.86 Aligned_cols=207 Identities=9% Similarity=0.066 Sum_probs=116.6
Q ss_pred cccceEEeeCC-CCceEEEEecCCCCCCeEEEEe--cC---Cc-c--EEEEecCccccccccCCCcccceeecCCCCeEE
Q 005093 42 MTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQ---SQ-L--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIA 112 (715)
Q Consensus 42 ~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~--~~---~~-~--~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la 112 (715)
.+.+...+||| ||++||.....+ ...+| .. +. . ......... +..+.|+||++.|+
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQG-----VIKIWNLKEIIVGEVYSSSLTYDCSST----------VTQITMIPNFDAFA 127 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTS-----EEEEEEHHHHHTTCCCSCSEEEECSSC----------EEEEEECTTSSEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCc-----eEEEeECcccccCcccceeeeccCCCC----------EEEEEEeCCCCEEE
Confidence 36789999999 999998776542 34455 22 22 1 111122222 37999999999887
Q ss_pred EEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc---CCceEeecC---------C
Q 005093 113 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ---SGEVQAVKG---------I 180 (715)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~---~g~~~~l~~---------~ 180 (715)
..+.+ ..|.+||++ +++...... .
T Consensus 128 s~s~d--------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~ 163 (437)
T 3gre_A 128 VSSKD--------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKINLK 163 (437)
T ss_dssp EEETT--------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGG
T ss_pred EEeCC--------------------------------------------CEEEEEEeccccCCceeeccccceeEEEEcc
Confidence 75432 557888874 443322200 0
Q ss_pred C--CCCccceE--EEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-cee
Q 005093 181 P--KSLSVGQV--VWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN 255 (715)
Q Consensus 181 ~--~~~~~~~~--~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 255 (715)
+ .......+ .++||++. |+... .+..|.++|+ .+++ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~ 207 (437)
T 3gre_A 164 NFGKNEYAVRMRAFVNEEKSL----LVALT---------------NLSRVIIFDI-----------------RTLERLQI 207 (437)
T ss_dssp GGSSCCCEEEEEEEECSSCEE----EEEEE---------------TTSEEEEEET-----------------TTCCEEEE
T ss_pred CcccccCceEEEEEEcCCCCE----EEEEe---------------CCCeEEEEeC-----------------CCCeeeEE
Confidence 0 11112222 25667765 55443 3347888887 4444 344
Q ss_pred cCC--CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cc-cceeeeeeceecCCCCCccccc
Q 005093 256 LTE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SL-EKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 256 lt~--~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt-~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
+.. ....+...+|+|||+.|+..+.+. .|.++|+.++.... +. .....+..+
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~v~~~------------- 263 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRG-----------IIDIWDIRFNVLIRSWSFGDHAPITHV------------- 263 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEEEBCTTCEEEEEE-------------
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCC-----------eEEEEEcCCccEEEEEecCCCCceEEE-------------
Confidence 444 355788899999999888776553 48888887644311 11 111111100
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
...+.|++|+. ++++...+ ..|..+|+.+++.....
T Consensus 264 ---~~~~~~s~~~~-~l~s~~~d--g~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 264 ---EVCQFYGKNSV-IVVGGSSK--TFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp ---EECTTTCTTEE-EEEEESTT--EEEEEEETTTTEEEEEE
T ss_pred ---EeccccCCCcc-EEEEEcCC--CcEEEEEcCCCcEEEEE
Confidence 01225677876 44444433 46777788888765443
No 415
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.48 E-value=4.7e-07 Score=94.46 Aligned_cols=108 Identities=13% Similarity=0.084 Sum_probs=67.6
Q ss_pred CCCcEEEEEcCCCCCC------CCccch----HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCC---------CCCC--
Q 005093 479 SCDPLIVVLHGGPHSV------SLSSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP---------GKVG-- 537 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~------~~~~~~----~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~---------~~~~-- 537 (715)
+..|.||++||..... ....|. .+++.|+++||.|+++|++| +|.+...... ...+
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G---~G~S~~~~~~l~~~i~~g~g~sg~~ 126 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA---LASNHERAVELYYYLKGGRVDYGAA 126 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SSCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC---CCCCccchHHhhhhhhhcccccccc
Confidence 3456699999954421 123443 47888999999999999999 5544311000 0000
Q ss_pred -------ccchhhHHHHHHHHHHcCCCC-CceEEEEEeChhHHHHHHHHhh--------------------------CCC
Q 005093 538 -------SQDVNDVLTAIDHVIDMGLAN-PSKVTVVGGSHGGFLTTHLIGQ--------------------------APD 583 (715)
Q Consensus 538 -------~~~~~d~~~~i~~l~~~~~~d-~~~i~l~G~S~GG~~a~~~a~~--------------------------~p~ 583 (715)
....+|+.++++ . .. ..++.|+||||||.++..++.. +|+
T Consensus 127 ~~~~~~~~~~a~dl~~ll~----~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~ 200 (431)
T 2hih_A 127 HSEKYGHERYGKTYEGVLK----D--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDN 200 (431)
T ss_dssp HHHHHTCCSEEEEECCSCT----T--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCS
T ss_pred ccccCCHHHHHHHHHHHHH----H--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCccc
Confidence 000011111111 1 12 3789999999999999998765 688
Q ss_pred ceeEEEecCCcc
Q 005093 584 KFVAAAARNPLC 595 (715)
Q Consensus 584 ~~~~~v~~~~~~ 595 (715)
+++++|++++..
T Consensus 201 ~V~slv~i~tP~ 212 (431)
T 2hih_A 201 MVTSITTIATPH 212 (431)
T ss_dssp CEEEEEEESCCT
T ss_pred ceeEEEEECCCC
Confidence 999999988754
No 416
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.47 E-value=1.5e-06 Score=94.47 Aligned_cols=302 Identities=10% Similarity=-0.026 Sum_probs=139.8
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCC------CceEEEEecCCCCCCeEEEEecCCcc-EEEEecC
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS------GSKLLVVRNPENESPIQFELWSQSQL-EKEFHVP 86 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd------g~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 86 (715)
....|.+++++++..... +. ..+....+.+...+|||+ ++.||-.... +.-.+|.+..+... .......
T Consensus 181 ~D~tI~iWd~~~~~~~~~-~~-~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~D--gtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCV-KV-QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQE--GTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp -CEEEEEEEEETTTCCEE-EE-EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETT--SCEEEEECCCCSSSSSEEECCC
T ss_pred CCceEEEEEccCCCCCce-EE-EEEEecCCcEEEEEECCCCCCCCCCceEEEEecC--CeEEEEEcCCCccccccceeec
Confidence 455666666766542111 00 011222366888999997 5677766554 33344444322111 0000000
Q ss_pred ccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCC-CCcCCCCCCCCC--cccCCcC-cccC-CccC
Q 005093 87 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS-SDKDCNSWKGQG--DWEEDWG-ETYA-GKRQ 161 (715)
Q Consensus 87 ~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~g-~~~~-~~~~ 161 (715)
............+..+.|+|++ .|+..+.+... ..|......... ........+..+ .|.++ | ..++ ....
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV--~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~-g~~~laS~S~D 332 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV--AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDF-EDTVVSTVAVD 332 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE--EEEETTBCSSCSEEEECSSSCEEEEEEECCTT-SCCEEEEEETT
T ss_pred CceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE--EEEECCCCCCceEEeecccccEEEEEEEcCCC-CCeEEEEeccC
Confidence 0000000001234789999975 56665544322 223222111100 011122233333 34444 3 2222 2335
Q ss_pred ceEEEEEccCCceEe-ecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 162 PSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~-l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
..|.+||+.+++... +.+......+..++|+||++. ++..+ ....|.++|+
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~----l~s~~---------------~d~tv~lwd~--------- 384 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS----YIYSD---------------GASSLRAVPS--------- 384 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE----EEEEC---------------SSSEEEEEET---------
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCe----EEEeC---------------CCCcEEEEEC---------
Confidence 789999998765322 210111113567899999987 66554 1225777786
Q ss_pred hhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 241 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 241 ~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
..+. ...+..+...+..++|||||+.|+-.+.+. .+.++|+..+-........ ...
T Consensus 385 --------~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg-----------tv~lwd~~~~~~~~~~~~~-~~~--- 441 (524)
T 2j04_B 385 --------RAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADG-----------SLIITNAARRLLHGIKNSS-ATQ--- 441 (524)
T ss_dssp --------TCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTT-----------EEECCBSCSSTTTCC-------C---
T ss_pred --------cccccceeeecCCCceEEEEeCCCCCeEEEEECCC-----------EEEEEechHhhccccccCc-cce---
Confidence 4433 456777777889999999999887666542 4667776442111110000 000
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGD 389 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~ 389 (715)
. ...+..++|+|+|+.+-+ . + ...++.++..+.....+......+....|+|++.
T Consensus 442 -----~------~~~v~~v~~sp~g~~~~~--~-~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 442 -----K------SLRLWKWDYSIKDDKYRI--D-S-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp -----C------CCEEEECBCCSSSCEEEE--C-C-CCCCCC-------------CCCSCCCEEECCSTT
T ss_pred -----e------eeEEEEeccCCCCCeEEc--c-C-CceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 0 001235678999984422 1 1 1223333322333444444444455568999864
No 417
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.45 E-value=1.5e-05 Score=81.20 Aligned_cols=217 Identities=10% Similarity=0.036 Sum_probs=121.9
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
......++|||| +| |+.+. ....++.++ .+++..+...+..... . ......+.+ ++++|+.. ..
T Consensus 84 ~~p~~i~~~~~g-~l-yv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~-~---~~~p~~i~~--~~~~lyv~-~~---- 148 (328)
T 3dsm_A 84 TSPRYIHFLSDE-KA-YVTQI--WDYRIFIINPKTYEITGYIECPDMDM-E---SGSTEQMVQ--YGKYVYVN-CW---- 148 (328)
T ss_dssp SSEEEEEEEETT-EE-EEEEB--SCSEEEEEETTTTEEEEEEECTTCCT-T---TCBCCCEEE--ETTEEEEE-EC----
T ss_pred CCCcEEEEeCCC-eE-EEEEC--CCCeEEEEECCCCeEEEEEEcCCccc-c---CCCcceEEE--ECCEEEEE-cC----
Confidence 446778889998 54 55552 123677777 5666555554433000 0 001146666 56666554 21
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
+ ....|.++|+++++.... .+.......+.++|||+
T Consensus 149 -------------------------------~------~~~~v~viD~~t~~~~~~--i~~g~~p~~i~~~~dG~----- 184 (328)
T 3dsm_A 149 -------------------------------S------YQNRILKIDTETDKVVDE--LTIGIQPTSLVMDKYNK----- 184 (328)
T ss_dssp -------------------------------T------TCCEEEEEETTTTEEEEE--EECSSCBCCCEECTTSE-----
T ss_pred -------------------------------C------CCCEEEEEECCCCeEEEE--EEcCCCccceEEcCCCC-----
Confidence 1 126799999999886543 22233456788999997
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCC-CccccceeEcCCCCeEEEEe
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-ISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~-~~~~~~~~~spdg~~l~~~~ 279 (715)
+++........ ..+. .....|+++|. ++++.. .+.-+ ......++|+|||++|++..
T Consensus 185 l~v~~~~~~~~-~~~~---~~~~~v~~id~-----------------~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 185 MWTITDGGYEG-SPYG---YEAPSLYRIDA-----------------ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEBCCBCTT-CSSC---BCCCEEEEEET-----------------TTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEECCCccC-Cccc---cCCceEEEEEC-----------------CCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 56655321100 0000 01247999996 556544 33222 22567899999999886653
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee--CCee
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQ 357 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~--~~~~ 357 (715)
. .|+++|..+++..... . .. . .. ..+..++++|++..||++... ....
T Consensus 244 ~-------------~v~~~d~~t~~~~~~~--~---~~---~--~~-------~~p~gi~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 244 N-------------DIWRMPVEADRVPVRP--F---LE---F--RD-------TKYYGLTVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp S-------------SEEEEETTCSSCCSSC--S---BC---C--CS-------SCEEEEEECTTTCCEEEEECTTSSSEE
T ss_pred c-------------EEEEEECCCCceeeee--e---ec---C--CC-------CceEEEEEcCCCCeEEEEcccccccCC
Confidence 2 3899998876642110 0 00 0 00 123456788866667776421 2456
Q ss_pred EEEEEECCCCcEE
Q 005093 358 VIISVNVSSGELL 370 (715)
Q Consensus 358 ~l~~~d~~tg~~~ 370 (715)
.|+.+|++ |+..
T Consensus 294 ~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 294 IVYRYSPQ-GKLI 305 (328)
T ss_dssp EEEEECTT-CCEE
T ss_pred EEEEECCC-CCEE
Confidence 89999987 5533
No 418
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.44 E-value=6.1e-06 Score=84.21 Aligned_cols=144 Identities=8% Similarity=0.058 Sum_probs=85.2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|+++|+++++.+.+. ......+..+.|+|||+ +++....... ....|+++|.
T Consensus 66 ~~i~~~d~~~~~~~~~~-~~~~~~~~~i~~~~dg~-----l~v~~~~~~~----------~~~~i~~~d~---------- 119 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPF-VSHKANPAAIKIHKDGR-----LFVCYLGDFK----------STGGIFAATE---------- 119 (333)
T ss_dssp CEEEEECTTTCCEEEEE-ECSSSSEEEEEECTTSC-----EEEEECTTSS----------SCCEEEEECT----------
T ss_pred CEEEEEeCCCCcEEEEe-eCCCCCcceEEECCCCc-----EEEEeCCCCC----------CCceEEEEeC----------
Confidence 57999999999877662 12334567889999997 4444321100 1136999996
Q ss_pred hhhccCCCCCCceec-CC--CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 242 ELKESSSEDLPVVNL-TE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 242 ~~~~~~~~~~~~~~l-t~--~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
+++..+.+ .. .......+.++|||+ +++...... .......||+++..+++...+....
T Consensus 120 -------~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~------ 181 (333)
T 2dg1_A 120 -------NGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGY----STNPLGGVYYVSPDFRTVTPIIQNI------ 181 (333)
T ss_dssp -------TSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCB----TTBCCEEEEEECTTSCCEEEEEEEE------
T ss_pred -------CCCEEEEEEccCccCCcccceEECCCCC-EEEEecccc----ccCCCceEEEEeCCCCEEEEeecCC------
Confidence 66665533 21 223466789999996 555543210 0012346999987654433221110
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
.....++|++||+.+++..... ..|+++|++
T Consensus 182 --------------~~~~~i~~~~dg~~l~v~~~~~--~~i~~~d~~ 212 (333)
T 2dg1_A 182 --------------SVANGIALSTDEKVLWVTETTA--NRLHRIALE 212 (333)
T ss_dssp --------------SSEEEEEECTTSSEEEEEEGGG--TEEEEEEEC
T ss_pred --------------CcccceEECCCCCEEEEEeCCC--CeEEEEEec
Confidence 0123567999998787765433 478888875
No 419
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.44 E-value=6.2e-06 Score=86.48 Aligned_cols=86 Identities=6% Similarity=-0.014 Sum_probs=48.1
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCC--------CCceEEEEecCCCCCCeEEEEecCCccEEEEecCcc
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP--------SGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQT 88 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--------dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (715)
.+.++|+.++.....++ ...+..+.+.+...+||| ||+.||-.+.+ +.-.+|.+..++....+......
T Consensus 112 ~v~lw~~~~~~~~~~~~-~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D--~tv~~Wd~~~~~~~~~~~~~~~~ 188 (393)
T 4gq1_A 112 TVRLIITKNETIITQHV-LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD--CTLIIWRLTDEGPILAGYPLSSP 188 (393)
T ss_dssp CEEEEEEETTEEEEEEE-ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT--SEEEEEEEETTEEEEEEEECSSC
T ss_pred cEEEEECCCCccceeee-ecccCCCCCceEEEEEccccccccCCCCCEEEEEECC--CeEEEEECCCCceeeeecCCCCC
Confidence 34555565543211111 123444557799999998 99999877654 22233333233333344333333
Q ss_pred ccccccCCCcccceeecCCCCeEEEEe
Q 005093 89 VHGSVYADGWFEGISWNSDETLIAYVA 115 (715)
Q Consensus 89 ~~~~~~~~~~~~~~~wSpDg~~la~~~ 115 (715)
+ ..+.|+|++..++..+
T Consensus 189 v----------~~v~~~p~~~~~l~~~ 205 (393)
T 4gq1_A 189 G----------ISVQFRPSNPNQLIVG 205 (393)
T ss_dssp E----------EEEEEETTEEEEEEEE
T ss_pred c----------EEEEECCCCCceEEec
Confidence 3 6899999997655543
No 420
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.41 E-value=6.7e-06 Score=89.32 Aligned_cols=160 Identities=6% Similarity=-0.055 Sum_probs=91.7
Q ss_pred ceEEEEEccCCceE------------eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEE
Q 005093 162 PSLFVININSGEVQ------------AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 229 (715)
Q Consensus 162 ~~l~~~~~~~g~~~------------~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~ 229 (715)
..|.+||+.+++.. .+ ......+..++|+|++ . |+..+ .+..|.++
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l--~~h~~~v~sv~~s~~~-~----lasgs---------------~DgtV~lW 292 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTL--SLADSLITTFDFLSPT-T----VVCGF---------------KNGFVAEF 292 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEE--CCTTTCEEEEEESSSS-E----EEEEE---------------TTSEEEEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEE--EcCCCCEEEEEecCCC-e----EEEEe---------------CCCEEEEE
Confidence 45788888765321 22 1223457788999864 4 55443 23468888
Q ss_pred ecccccchhhhhhhhccCCCCCC--ceecCCCCccccce--eEcCCC-CeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 230 RVSLYKSEASELELKESSSEDLP--VVNLTESISSAFFP--RFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~--~~spdg-~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
|+ .++. ...+..+...+..+ .|+|+| +.|+-.+.+. .+.++|+.+++
T Consensus 293 D~-----------------~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-----------tvklWD~~~~~ 344 (524)
T 2j04_B 293 DL-----------------TDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-----------YFYIFNPKDIA 344 (524)
T ss_dssp ET-----------------TBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-----------EEEEECGGGHH
T ss_pred EC-----------------CCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-----------eEEEEECCCCC
Confidence 87 4332 23355556667777 679998 6666555442 47888876643
Q ss_pred CCCcccceeeeeeceecCCCCCcccccc-CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeE
Q 005093 305 NFSSLEKIVDVIPVVQCAEGDCFPGLYS-SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWS 382 (715)
Q Consensus 305 ~~~lt~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~ 382 (715)
...... ++.. ..+..++|+|+++.+ +++...+ .+..+|+.++.. ..+......+...
T Consensus 345 ~~~~~~------------------~~~~~~~v~~v~fsp~~~~l-~s~~~d~--tv~lwd~~~~~~~~~l~gH~~~V~sv 403 (524)
T 2j04_B 345 TTKTTV------------------SRFRGSNLVPVVYCPQIYSY-IYSDGAS--SLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp HHCEEE------------------EECSCCSCCCEEEETTTTEE-EEECSSS--EEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred cccccc------------------cccccCcccceEeCCCcCeE-EEeCCCC--cEEEEECcccccceeeecCCCceEEE
Confidence 211000 0000 124567899999864 4444333 456668877764 4444444445556
Q ss_pred EEeecCCEEE
Q 005093 383 LLTLDGDNII 392 (715)
Q Consensus 383 ~~s~~~~~l~ 392 (715)
.|++++..|+
T Consensus 404 a~Sp~g~~l~ 413 (524)
T 2j04_B 404 GVSRLHPMVL 413 (524)
T ss_dssp ECCSSCCBCE
T ss_pred EeCCCCCeEE
Confidence 7788777554
No 421
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.40 E-value=1.1e-06 Score=90.22 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=65.6
Q ss_pred CCcEEEEEcCCCCCCCC-----ccch----HHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHH
Q 005093 480 CDPLIVVLHGGPHSVSL-----SSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDH 550 (715)
Q Consensus 480 ~~P~vv~iHGg~~~~~~-----~~~~----~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~ 550 (715)
..+.||++||....... ..|. .+++.|+++||.|+++|++| +|.+... ..++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g---~G~s~~~----------a~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWDR----------ACEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SBCHHHH----------HHHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC---CCCcccc----------HHHHHHHHHh
Confidence 34558999995443211 2243 34588999999999999998 5543211 1222222221
Q ss_pred --------HHHc---------------CCCCCceEEEEEeChhHHHHHHHHhh-------------------CC------
Q 005093 551 --------VIDM---------------GLANPSKVTVVGGSHGGFLTTHLIGQ-------------------AP------ 582 (715)
Q Consensus 551 --------l~~~---------------~~~d~~~i~l~G~S~GG~~a~~~a~~-------------------~p------ 582 (715)
+.+. .....+++.|+||||||.++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1100 00235789999999999999998872 35
Q ss_pred CceeEEEecCCcc
Q 005093 583 DKFVAAAARNPLC 595 (715)
Q Consensus 583 ~~~~~~v~~~~~~ 595 (715)
++++.+|++++..
T Consensus 152 ~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 152 HFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEEESCCT
T ss_pred cceeEEEEECCCC
Confidence 6899999888754
No 422
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.39 E-value=3.9e-05 Score=78.61 Aligned_cols=143 Identities=10% Similarity=-0.011 Sum_probs=89.0
Q ss_pred ccceEEeeCC--CCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecC
Q 005093 43 TGASAVVPSP--SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 118 (715)
Q Consensus 43 ~~~~~~~~Sp--dg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~ 118 (715)
+.+...+|+| +|++++.....+ ...+| ..++...+...... ..+..+.|+|||+.|+..+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~--------~~i~~~~~~pdg~~lasg~~-- 190 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSD--------VEYSSGVLHKDSLLLALYSP-- 190 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSS--------CCCCEEEECTTSCEEEEECT--
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCC--------CceEEEEECCCCCEEEEEcC--
Confidence 4578899999 999988766543 23445 44444333322111 12378999999998877432
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceE--eecCCCCCCccceEEEecCCC
Q 005093 119 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~--~l~~~~~~~~~~~~~~spdg~ 196 (715)
...|.+||+.+++.. .+. ......+..++|+|||+
T Consensus 191 ------------------------------------------dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~ 227 (343)
T 3lrv_A 191 ------------------------------------------DGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGY 227 (343)
T ss_dssp ------------------------------------------TSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSS
T ss_pred ------------------------------------------CCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCC
Confidence 256999999988754 442 11345788999999999
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCC---CCcccc--ceeEcC
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE---SISSAF--FPRFSP 270 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~---~~~~~~--~~~~sp 270 (715)
. |+..+. ..|.++|+ ..+.. ..+.. +..... ..+|+|
T Consensus 228 ~----l~s~~~----------------~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 228 W----MVVECD----------------QTVVCFDL-----------------RKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp E----EEEEES----------------SBEEEEET-----------------TSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred E----EEEEeC----------------CeEEEEEc-----------------CCCCcceeecccccccccccceEEEECC
Confidence 7 666541 15778887 33332 22222 122233 499999
Q ss_pred CCCeEEEEec
Q 005093 271 DGKFLVFLSA 280 (715)
Q Consensus 271 dg~~l~~~~~ 280 (715)
+|++|+..+.
T Consensus 271 ~g~~l~~~s~ 280 (343)
T 3lrv_A 271 SGKNMIAYSN 280 (343)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEecC
Confidence 9999987665
No 423
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.39 E-value=9.8e-06 Score=82.51 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=83.7
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|+++|+++++.+.+. . ...+..+.|+|||+. ++... ..|+++|+
T Consensus 71 ~~i~~~d~~~~~~~~~~--~-~~~v~~i~~~~dg~l----~v~~~-----------------~gl~~~d~---------- 116 (326)
T 2ghs_A 71 RELHELHLASGRKTVHA--L-PFMGSALAKISDSKQ----LIASD-----------------DGLFLRDT---------- 116 (326)
T ss_dssp TEEEEEETTTTEEEEEE--C-SSCEEEEEEEETTEE----EEEET-----------------TEEEEEET----------
T ss_pred CEEEEEECCCCcEEEEE--C-CCcceEEEEeCCCeE----EEEEC-----------------CCEEEEEC----------
Confidence 67999999999877662 2 234667889999985 44321 14889996
Q ss_pred hhhccCCCCCCceecCCCC-----ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeee
Q 005093 242 ELKESSSEDLPVVNLTESI-----SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 316 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~~-----~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~ 316 (715)
.+++.+.+.... .....+.++|||+ +++...... .......||+++ +++.+.+....
T Consensus 117 -------~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~----~~~~~~~l~~~~--~g~~~~~~~~~---- 178 (326)
T 2ghs_A 117 -------ATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRK----AETGAGSIYHVA--KGKVTKLFADI---- 178 (326)
T ss_dssp -------TTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETT----CCTTCEEEEEEE--TTEEEEEEEEE----
T ss_pred -------CCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCc----CCCCceEEEEEe--CCcEEEeeCCC----
Confidence 667766554321 2356789999998 555543211 001234699998 33322221100
Q ss_pred eceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC--CC
Q 005093 317 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS--SG 367 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~--tg 367 (715)
.....++|++||+.+++.... ...|+.++++ +|
T Consensus 179 ----------------~~~~~i~~s~dg~~lyv~~~~--~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 179 ----------------SIPNSICFSPDGTTGYFVDTK--VNRLMRVPLDARTG 213 (326)
T ss_dssp ----------------SSEEEEEECTTSCEEEEEETT--TCEEEEEEBCTTTC
T ss_pred ----------------cccCCeEEcCCCCEEEEEECC--CCEEEEEEcccccC
Confidence 012356799999988876433 3578888875 66
No 424
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.39 E-value=3.8e-05 Score=78.70 Aligned_cols=121 Identities=18% Similarity=0.102 Sum_probs=72.7
Q ss_pred EeeCCCCceEEEEecCC--CCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 48 VVPSPSGSKLLVVRNPE--NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
....|||++++ +.+.. .....++.++ .+++....+...... .+.+||||++|+.......
T Consensus 38 ~~~~pd~~~vy-V~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-----------~va~spDG~~lyVan~~~~----- 100 (386)
T 3sjl_D 38 EAPAPDARRVY-VNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-----------NPVVADDGSFIAHASTVFS----- 100 (386)
T ss_dssp CCCCCCTTEEE-EEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-----------EEEECTTSSCEEEEEEEEE-----
T ss_pred eccCCCCCEEE-EEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-----------cEEECCCCCEEEEEccccc-----
Confidence 35579999875 44432 1234788888 666666555543333 4999999999877542100
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCC------CCccceEEEecCCCCC
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK------SLSVGQVVWAPLNEGL 198 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~------~~~~~~~~~spdg~~~ 198 (715)
...+|+ ....|.++|.+++++..-..... ......+.+||||++
T Consensus 101 ------------------------r~~~G~-----~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~- 150 (386)
T 3sjl_D 101 ------------------------RIARGE-----RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT- 150 (386)
T ss_dssp ------------------------ETTEEE-----EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSE-
T ss_pred ------------------------ccccCC-----CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCE-
Confidence 000111 23679999999988654210111 124667899999996
Q ss_pred ccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 199 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 199 ~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
++. ++.. ....|.++|+
T Consensus 151 ---lyV-an~~------------~~~~VsVID~ 167 (386)
T 3sjl_D 151 ---LLF-YQFS------------PAPAVGVVDL 167 (386)
T ss_dssp ---EEE-EECS------------SSCEEEEEET
T ss_pred ---EEE-EEcC------------CCCeEEEEEC
Confidence 554 4321 1237999997
No 425
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.39 E-value=0.00016 Score=74.67 Aligned_cols=219 Identities=13% Similarity=-0.016 Sum_probs=104.4
Q ss_pred CceEEEEEccCCceEeecCCC--CCCccceEEEecCCCCCccEEEEEeecCc-cceeeeeeee---cCCceEEEEecccc
Q 005093 161 QPSLFVININSGEVQAVKGIP--KSLSVGQVVWAPLNEGLHQYLVFVGWSSE-TRKLGIKYCY---NRPCALYAVRVSLY 234 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~--~~~~~~~~~~spdg~~~~~~i~~~~~~~~-~~~~g~~~~~---~~~~~i~~~~~~~~ 234 (715)
...|.++|.+|+++..--... ......++.|+||++. ++.+.|... ..+.|+.... ....+|.++|+
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~----mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~--- 235 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV----LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL--- 235 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE----EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET---
T ss_pred CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE----EEEccCcCccccccccchhhhhhccCCEEEEEEC---
Confidence 478999999998876441011 1122346889999995 554433110 0111221100 12457999997
Q ss_pred cchhhhhhhhccCCCCCCc-eecCCC-Cc-cccce--eEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcc
Q 005093 235 KSEASELELKESSSEDLPV-VNLTES-IS-SAFFP--RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 309 (715)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~lt~~-~~-~~~~~--~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt 309 (715)
.+++. ..+.-. .+ ..... +|+|||++++....-+.. .-...|+++..+.+...
T Consensus 236 --------------~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~-----~Lss~V~v~~~d~g~~~--- 293 (462)
T 2ece_A 236 --------------RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK-----DLSSSIWLWFYEDGKWN--- 293 (462)
T ss_dssp --------------TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT-----TCCEEEEEEEEETTEEE---
T ss_pred --------------CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc-----CCCceEEEEEecCCcee---
Confidence 44432 233322 21 23333 459999977666551100 01134665554432210
Q ss_pred cceeeeeeceecCCCCCcc---ccc---cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC-CC--cEE-EecCC----
Q 005093 310 EKIVDVIPVVQCAEGDCFP---GLY---SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS-SG--ELL-RITPA---- 375 (715)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~-tg--~~~-~l~~~---- 375 (715)
...++.+....-....+ ..+ ......+..|+||++||++....+ .|..+|+. .+ +.. .+..+
T Consensus 294 --~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d--~VavfdV~d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 294 --AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIG--EVRQYDISNPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp --EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTT--EEEEEECSSTTSCEEEEEEECBTTTT
T ss_pred --EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCC--EEEEEEecCCCCcEEEEEEEeCCeec
Confidence 00111110000000010 000 013467779999998877654444 55555653 22 222 23222
Q ss_pred -------C---CCceeEEEeecCCEEEEEEe-------C---CCCCCeEEEEeeccc
Q 005093 376 -------E---SNFSWSLLTLDGDNIIAVSS-------S---PVDVPQVKYGYFVDK 412 (715)
Q Consensus 376 -------~---~~~~~~~~s~~~~~l~~~~~-------~---~~~p~~l~~~~~~~~ 412 (715)
. +.-....+++||++|+++.+ . ......++.++.+..
T Consensus 370 ~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~ 426 (462)
T 2ece_A 370 RADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPS 426 (462)
T ss_dssp CBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTT
T ss_pred cccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCC
Confidence 0 00133578999999887762 1 133455666665543
No 426
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.39 E-value=8.3e-06 Score=95.05 Aligned_cols=202 Identities=11% Similarity=0.055 Sum_probs=121.6
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
..++|||||+.||..+. ...|++|+..+++....
T Consensus 21 ~~lafspdg~~lAsgs~--------------------------------------------Dg~I~lw~~~~~~~~~~-- 54 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATV--------------------------------------------TGEVHIYGQQQVEVVIK-- 54 (902)
T ss_dssp EEEEEETTTTEEEEEET--------------------------------------------TSEEEEECSTTCEEEEE--
T ss_pred EEEEECCCCCEEEEEeC--------------------------------------------CCEEEEEeCCCcEEEEE--
Confidence 79999999999888532 25689999887766544
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCC
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE 258 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~ 258 (715)
......+..++|+| |+. |+..+ .+..|.++|+ .+++. ..+.
T Consensus 55 ~~~~~~V~~l~fsp-g~~----L~S~s---------------~D~~v~lWd~-----------------~~~~~~~~~~- 96 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIY----LVVIN---------------AKDTVYVLSL-----------------YSQKVLTTVF- 96 (902)
T ss_dssp CSSCCCEEEEEEET-TTE----EEEEE---------------TTCEEEEEET-----------------TTCSEEEEEE-
T ss_pred cCCCCCEEEEEEcC-CCE----EEEEE---------------CcCeEEEEEC-----------------CCCcEEEEEc-
Confidence 33445688999999 775 66554 2236788887 44443 3333
Q ss_pred CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCC
Q 005093 259 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 338 (715)
Q Consensus 259 ~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 338 (715)
....+....|+|||++|+..+.+. .|.++|+.++..... .+..++... .... .+...+..+
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg-----------~V~lwd~~~~~~~~~-----~i~~~~~~~--~~~~-~h~~~V~sl 157 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNG-----------SMIVYDIDRDQLSSF-----KLDNLQKSS--FFPA-ARLSPIVSI 157 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTS-----------CEEEEETTTTEEEEE-----EECCHHHHH--TCSS-SCCCCCCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCccccc-----eeccccccc--cccc-cCCCCeEEE
Confidence 445688899999999988766552 488888876542100 000000000 0000 122356778
Q ss_pred ccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-------------------CCceeEEEeecCCEEEEEEeCCC
Q 005093 339 PWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------------SNFSWSLLTLDGDNIIAVSSSPV 399 (715)
Q Consensus 339 ~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-------------------~~~~~~~~s~~~~~l~~~~~~~~ 399 (715)
+|+|++..++++...++ .+ .+|+.+++........ ..+....|++++..|+....+
T Consensus 158 ~~sp~~~~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D-- 232 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED-- 232 (902)
T ss_dssp EEETTEEEEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT--
T ss_pred EEccCCCCEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC--
Confidence 89997654555555444 45 7798888765543321 223445788888766544422
Q ss_pred CCCeEEEEeecc
Q 005093 400 DVPQVKYGYFVD 411 (715)
Q Consensus 400 ~p~~l~~~~~~~ 411 (715)
. .|.+.++.+
T Consensus 233 g--~i~lWd~~~ 242 (902)
T 2oaj_A 233 N--SLVFWDANS 242 (902)
T ss_dssp C--CEEEEETTT
T ss_pred C--eEEEEECCC
Confidence 1 255555543
No 427
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.39 E-value=2.3e-05 Score=80.79 Aligned_cols=189 Identities=14% Similarity=0.139 Sum_probs=103.0
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.+....++++++.++++...+ ....+| ..++..........+ ..+.|++++ ++...+ ..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v----------~~v~~~~~~--~~~~~~-~~-- 120 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPV----------KDLFLSREF--IVVSYG-DV-- 120 (355)
T ss_dssp CCCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCE----------EEEEECSSE--EEEEET-TE--
T ss_pred CeEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCce----------EEEEEcCCE--EEEEEc-CE--
Confidence 467788999999998775543 245666 344444433333222 678888875 333221 11
Q ss_pred CCCccCCCC-CCCCCCcCCCCCCCCCcccCCcCcccC-CccCceEEEEEccCCc-----------------eEeecCCCC
Q 005093 122 KPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYA-GKRQPSLFVININSGE-----------------VQAVKGIPK 182 (715)
Q Consensus 122 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~l~~~~~~~g~-----------------~~~l~~~~~ 182 (715)
...|..... +....... ..+-..+.+. .-.+. ......|.+||+.+++ ...+ ...
T Consensus 121 i~i~d~~~~~~~~~~~~~---~~~~~~~s~~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~h 194 (355)
T 3vu4_A 121 ISVFKFGNPWKRITDDIR---FGGVCEFSNG-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KAH 194 (355)
T ss_dssp EEEEESSTTCCBSSCCEE---EEEEEEEETT-EEEEEESSCTTCEEEEECCC------------------CCEEE--CCC
T ss_pred EEEEECCCCceeeEEecc---CCceEEEEcc-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE--Ecc
Confidence 111221111 00000000 0000011110 00000 2234789999998875 4445 334
Q ss_pred CCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCce-EEEEecccccchhhhhhhhccCCCCCC-ceecC-C-
Q 005093 183 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLP-VVNLT-E- 258 (715)
Q Consensus 183 ~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt-~- 258 (715)
...+..++|||||+. |+..+ .+.. |.++|+ .+++ ...+. .
T Consensus 195 ~~~v~~~~~s~~g~~----l~s~s---------------~d~~~v~iwd~-----------------~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 195 TNPIKMVRLNRKSDM----VATCS---------------QDGTIIRVFKT-----------------EDGVLVREFRRGL 238 (355)
T ss_dssp SSCEEEEEECTTSSE----EEEEE---------------TTCSEEEEEET-----------------TTCCEEEEEECTT
T ss_pred CCceEEEEECCCCCE----EEEEe---------------CCCCEEEEEEC-----------------CCCcEEEEEEcCC
Confidence 456788999999986 66554 2235 777786 4444 34454 2
Q ss_pred CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 259 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 259 ~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
....+...+|||||++|+..+.+. .|.++|+..+.
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~-----------~v~iw~~~~~~ 273 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKW-----------TLHVFEIFNDQ 273 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTC-----------EEEEEESSCCS
T ss_pred CCCcEEEEEECCCCCEEEEEECCC-----------EEEEEEccCCC
Confidence 566788999999999998777653 47778876543
No 428
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.38 E-value=3.6e-05 Score=79.50 Aligned_cols=85 Identities=18% Similarity=0.081 Sum_probs=48.9
Q ss_pred cccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCC---------CCcccccc
Q 005093 262 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG---------DCFPGLYS 332 (715)
Q Consensus 262 ~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~---------~~~~g~~~ 332 (715)
....+.+||||++| |++++. ...|.++|+.......+. ..+..... ....
T Consensus 322 ~pa~I~lS~DGrfL-YVSnrg---------~d~VavfdV~d~~~~~lv-------~~I~tGG~~~~~~~~~G~~~~---- 380 (462)
T 2ece_A 322 LVTDIDISLDDKFL-YLSLWG---------IGEVRQYDISNPFKPVLT-------GKVKLGGIFHRADHPAGHKLT---- 380 (462)
T ss_dssp CCCCEEECTTSCEE-EEEETT---------TTEEEEEECSSTTSCEEE-------EEEECBTTTTCBCCTTSCCCC----
T ss_pred ceeEEEECCCCCEE-EEEeCC---------CCEEEEEEecCCCCcEEE-------EEEEeCCeeccccccccccCC----
Confidence 46778999999977 566653 235888887533221111 11111100 0111
Q ss_pred CCCCCCccccCCCEEEEEee-----------eCCeeEEEEE--ECCCC
Q 005093 333 SSILSNPWLSDGCTMLLSSI-----------WGSSQVIISV--NVSSG 367 (715)
Q Consensus 333 ~~~~~~~~~~dg~~l~~~~~-----------~~~~~~l~~~--d~~tg 367 (715)
.....+.+++||++||++.. +.....++++ |.++|
T Consensus 381 ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G 428 (462)
T 2ece_A 381 GAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG 428 (462)
T ss_dssp SCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC
T ss_pred CCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC
Confidence 13567889999999988772 2234466655 66667
No 429
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=3.3e-05 Score=80.66 Aligned_cols=251 Identities=13% Similarity=0.079 Sum_probs=131.1
Q ss_pred CCCCceEEEEecCCCCC--CeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccC
Q 005093 51 SPSGSKLLVVRNPENES--PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 127 (715)
Q Consensus 51 Spdg~~la~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~ 127 (715)
.||++++ |+.+.+... ..+..++ .+++....+.+... .++.+||||++|+.........
T Consensus 81 ~~~~~~v-yV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-----------Pgia~SpDgk~lyVan~~~~~~------ 142 (426)
T 3c75_H 81 APDARRV-YIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-----------PHPVAAEDGSFFAQASTVFERI------ 142 (426)
T ss_dssp CCCTTEE-EEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-----------CEEEECTTSSCEEEEEEEEEET------
T ss_pred CCCCCEE-EEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-----------CceEECCCCCEEEEEecccccc------
Confidence 4788775 565543211 4788888 66666555544222 2799999999987764211000
Q ss_pred CCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCC--C----CCccceEEEecCCCCCcc
Q 005093 128 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIP--K----SLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~--~----~~~~~~~~~spdg~~~~~ 200 (715)
. .|+ ....|.++|..++++.. +. .. . ......+.+||||++
T Consensus 143 --------------------~---~G~-----~~~~VsviD~~t~~vv~~I~-v~g~~r~~~g~~P~~~~~spDGk~--- 190 (426)
T 3c75_H 143 --------------------A---RGK-----RTDYVEVFDPVTFLPIADIE-LPDAPRFLVGTYQWMNALTPDNKN--- 190 (426)
T ss_dssp --------------------T---EEE-----EEEEEEEECTTTCCEEEEEE-ETTCCCCCBSCCGGGSEECTTSSE---
T ss_pred --------------------c---cCC-----CCCEEEEEECCCCcEEEEEE-CCCccccccCCCcceEEEcCCCCE---
Confidence 0 011 23679999999987653 31 11 1 124567899999996
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCce-ecCCCCccccceeEcCCCCeEEEEe
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~spdg~~l~~~~ 279 (715)
++.+. .. ..+.|.++|+ ++++.. .+.-... ....|+|+..++..
T Consensus 191 -lyV~n-~~------------~~~~VsVID~-----------------~t~kvv~~I~v~g~----~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 191 -LLFYQ-FS------------PAPAVGVVDL-----------------EGKTFDRMLDVPDC----YHIFPASPTVFYMN 235 (426)
T ss_dssp -EEEEE-CS------------SSCEEEEEET-----------------TTTEEEEEEECCSE----EEEEEEETTEEEEE
T ss_pred -EEEEe-cC------------CCCeEEEEEC-----------------CCCeEEEEEEcCCc----eeeccCCCcEEEEE
Confidence 55443 21 1247999997 555443 3322111 22334444333322
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
..+ ..+..+++.+++..... ...+...... ....+.++++++.+++.+. . ..+
T Consensus 236 ~~d----------G~~~~V~~~~~~v~~~~------~~~~~v~~~p--------~~~~~~~~~dg~~~~~~s~-~--g~V 288 (426)
T 3c75_H 236 CRD----------GSLARVDFADGETKVTN------TEVFHTEDEL--------LINHPAFSLRSGRLVWPTY-T--GKI 288 (426)
T ss_dssp ETT----------SSEEEEECCTTCCEEEE------CCCCSCTTSC--------BCSCCEECTTTCEEEEEBT-T--SEE
T ss_pred cCC----------CCEEEEECCCCcEEEEe------eeeeccCCCc--------eeeEeeecCCCCEEEEEeC-C--CcE
Confidence 221 12333343222211000 0000000000 0123457889998888764 2 379
Q ss_pred EEEECCCCcEEEecC-----CC--------CCceeEEEeecCCEEEEEEeCCC------CCCeEEEEeecccC
Q 005093 360 ISVNVSSGELLRITP-----AE--------SNFSWSLLTLDGDNIIAVSSSPV------DVPQVKYGYFVDKA 413 (715)
Q Consensus 360 ~~~d~~tg~~~~l~~-----~~--------~~~~~~~~s~~~~~l~~~~~~~~------~p~~l~~~~~~~~~ 413 (715)
+.+|+.++....+.. .. .......++++++++|+...+.. ....|.++|+.+.+
T Consensus 289 ~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 289 FQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE 361 (426)
T ss_dssp EEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred EEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
Confidence 999997666543321 00 01112478899999888765321 13468888876543
No 430
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.38 E-value=3.3e-05 Score=77.22 Aligned_cols=216 Identities=10% Similarity=-0.028 Sum_probs=118.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec-CCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSP 120 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~-~~~ 120 (715)
..+...+++|||+.++. .. +...++.+. .+|+.+.+........ ...+..+.++|||+ |++.... ...
T Consensus 69 ~~~~~l~~~~dg~l~v~--~~--~~~~i~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~vtd~~~g~~ 138 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIAC--SH--GLRRLERQREPGGEWESIADSFEGKK-----LNSPNDVCLAPDGS-LWFSDPTYGID 138 (296)
T ss_dssp SSEEEEEECTTCCEEEE--ET--TTTEEEEECSTTCCEEEEECEETTEE-----CCCCCCEEECTTSC-EEEEECSHHHH
T ss_pred CCcceeeECCCCcEEEE--ec--CCCeEEEEcCCCCcEEEEeeccCCCC-----CCCCCCEEECCCCC-EEEECCccccc
Confidence 45678899999985432 22 223577666 4676655543211110 01125799999996 5443110 000
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCcc
Q 005093 121 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~ 200 (715)
.. ... ...........||.++.+ ++.+.+ .........++|+|||+.
T Consensus 139 ~~--~~~-------------------------~~~~~~~~~~~l~~~~~~-g~~~~~--~~~~~~~~gi~~s~dg~~--- 185 (296)
T 3e5z_A 139 KP--EEG-------------------------YGGEMELPGRWVFRLAPD-GTLSAP--IRDRVKPNGLAFLPSGNL--- 185 (296)
T ss_dssp CG--GGS-------------------------SCCCCCSSSCEEEEECTT-SCEEEE--ECCCSSEEEEEECTTSCE---
T ss_pred cc--ccc-------------------------ccccccCCCcEEEEECCC-CCEEEe--ecCCCCCccEEECCCCCE---
Confidence 00 000 000000123579999987 666665 233334567899999997
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc----eecCCCCccccceeEcCCCCeEE
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~lt~~~~~~~~~~~spdg~~l~ 276 (715)
+ ++.. ....|+++++. ..+.. +.+..........++++||+ |+
T Consensus 186 -l-v~~~--------------~~~~i~~~~~~----------------~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~ 232 (296)
T 3e5z_A 186 -L-VSDT--------------GDNATHRYCLN----------------ARGETEYQGVHFTVEPGKTDGLRVDAGGL-IW 232 (296)
T ss_dssp -E-EEET--------------TTTEEEEEEEC----------------SSSCEEEEEEEECCSSSCCCSEEEBTTSC-EE
T ss_pred -E-EEeC--------------CCCeEEEEEEC----------------CCCcCcCCCeEeeCCCCCCCeEEECCCCC-EE
Confidence 6 5431 22478888861 23433 22222233456789999997 54
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcc-ccCCCEEEEEeeeCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW-LSDGCTMLLSSIWGS 355 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~dg~~l~~~~~~~~ 355 (715)
... . ..|++++..+.....+... . .+..++| ++|++.|++++.
T Consensus 233 v~~-~-----------~~v~~~~~~g~~~~~~~~~--------------------~-~~~~~~f~~~d~~~L~v~t~--- 276 (296)
T 3e5z_A 233 ASA-G-----------DGVHVLTPDGDELGRVLTP--------------------Q-TTSNLCFGGPEGRTLYMTVS--- 276 (296)
T ss_dssp EEE-T-----------TEEEEECTTSCEEEEEECS--------------------S-CCCEEEEESTTSCEEEEEET---
T ss_pred EEc-C-----------CeEEEECCCCCEEEEEECC--------------------C-CceeEEEECCCCCEEEEEcC---
Confidence 444 2 2488888653211111100 0 1345567 588888887664
Q ss_pred eeEEEEEECCCCcEEE
Q 005093 356 SQVIISVNVSSGELLR 371 (715)
Q Consensus 356 ~~~l~~~d~~tg~~~~ 371 (715)
..||++++++++++.
T Consensus 277 -~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 277 -TEFWSIETNVRGLEH 291 (296)
T ss_dssp -TEEEEEECSCCBCCC
T ss_pred -CeEEEEEcccccccc
Confidence 379999998887653
No 431
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.36 E-value=0.00011 Score=73.78 Aligned_cols=249 Identities=11% Similarity=0.043 Sum_probs=137.0
Q ss_pred EEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe--cCCccEEEEecCccccccc
Q 005093 16 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 93 (715)
..|+++|+.++.. ...++ +..+...+...+|||+|++||-....+ ...+| .+++..+..... ..
T Consensus 45 ~tV~iWd~~tg~~-~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~~h-~~---- 110 (318)
T 4ggc_A 45 NSVYLWSASSGDI-LQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTSH-SA---- 110 (318)
T ss_dssp TEEEEEETTTCCE-EEEEE---CCSTTCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECC-SS----
T ss_pred CEEEEEECCCCCE-EEEEE---ecCCCCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEEecCc-cc----
Confidence 4566666765532 11121 111224588999999999998765543 45566 344433332211 11
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
....++++++.|+..+.. ..+.+++..++.
T Consensus 111 ------~~~~~~~~~~~l~s~~~~--------------------------------------------~~~~~~~~~~~~ 140 (318)
T 4ggc_A 111 ------RVGSLSWNSYILSSGSRS--------------------------------------------GHIHHHDVRVAE 140 (318)
T ss_dssp ------CEEEEEEETTEEEEEETT--------------------------------------------SEEEEEETTSSS
T ss_pred ------eEEEeecCCCEEEEEecC--------------------------------------------CceEeeecCCCc
Confidence 245677777766654321 445666665543
Q ss_pred eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc
Q 005093 174 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 253 (715)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (715)
....+-...........|+++|+. ++... .+..|.++|+ .+++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~----l~s~~---------------~d~~i~iwd~-----------------~~~~~ 184 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRH----LASGG---------------NDNLVNVWPS-----------------APGEG 184 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEES-----------------SCBTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCE----EEEEe---------------cCcceeEEEC-----------------CCCcc
Confidence 322110222334667789999986 66543 2235777776 33321
Q ss_pred -----eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcc
Q 005093 254 -----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 328 (715)
Q Consensus 254 -----~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~ 328 (715)
.........+....++|++..++...... ....|.+++...........
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--------~~~~i~lwd~~~~~~~~~~~------------------ 238 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT--------SDRHIRIWNVCSGACLSAVD------------------ 238 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT--------TTCEEEEEETTTCCEEEEEE------------------
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecC--------CCCEEEEEeccccccccccc------------------
Confidence 22333445677889999988887655432 12357777766543311100
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEE
Q 005093 329 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIA 393 (715)
Q Consensus 329 g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~ 393 (715)
....+....|+++++.++..+. .....|..+|+.+++...... ....+....|++++..|+.
T Consensus 239 --~~~~v~~~~~~~~~~~~~~~sg-~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 239 --AHSQVCSILWSPHYKELISGHG-FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp --CSSCEEEEEEETTTTEEEEEEC-TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred --ceeeeeeeeecccccceEEEEE-cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 0012334568888887766543 223457777988887665443 3344445577888776553
No 432
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.35 E-value=2e-06 Score=86.68 Aligned_cols=259 Identities=7% Similarity=-0.033 Sum_probs=132.1
Q ss_pred ceEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecC--CccEEEEecCccccc
Q 005093 14 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQ--SQLEKEFHVPQTVHG 91 (715)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 91 (715)
....|.++|+.+... ...+.. ..+.+...+|||||+.|+..... +.-.+|.++.. ++...... ....
T Consensus 37 ~dg~v~vw~~~~~~~-~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~~~~~~~~~~~~~---~~~~ 105 (313)
T 3odt_A 37 RDGTVRLWSKDDQWL-GTVVYT-----GQGFLNSVCYDSEKELLLFGGKD--TMINGVPLFATSGEDPLYTLI---GHQG 105 (313)
T ss_dssp TTSEEEEEEESSSEE-EEEEEE-----CSSCEEEEEEETTTTEEEEEETT--SCEEEEETTCCTTSCC-CEEC---CCSS
T ss_pred cCCcEEEEECCCCEE-EEEeec-----CCccEEEEEECCCCCEEEEecCC--CeEEEEEeeecCCCCcccchh---hccc
Confidence 445566666744321 121222 23668999999999999877654 33344444422 22222221 1111
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCccc-CCccCceEEEEEcc
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETY-AGKRQPSLFVININ 170 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~ 170 (715)
.+..+.| +++.|+..+.+.... .|. ...................+.+..+..+ .......|.+||..
T Consensus 106 ------~i~~~~~--~~~~l~~~~~d~~i~--~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 173 (313)
T 3odt_A 106 ------NVCSLSF--QDGVVISGSWDKTAK--VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND 173 (313)
T ss_dssp ------CEEEEEE--ETTEEEEEETTSEEE--EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ------CEEEEEe--cCCEEEEEeCCCCEE--EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC
Confidence 1256667 566666654433211 111 0000000001111122223333112222 22234679999842
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
.....+. ......+..+.|+|+++ ++... .+..|.++|+ .+
T Consensus 174 -~~~~~~~-~~~~~~i~~~~~~~~~~-----~~~~~---------------~dg~i~i~d~-----------------~~ 214 (313)
T 3odt_A 174 -KVIKTFS-GIHNDVVRHLAVVDDGH-----FISCS---------------NDGLIKLVDM-----------------HT 214 (313)
T ss_dssp -EEEEEEC-SSCSSCEEEEEEEETTE-----EEEEE---------------TTSEEEEEET-----------------TT
T ss_pred -ceEEEEe-ccCcccEEEEEEcCCCe-----EEEcc---------------CCCeEEEEEC-----------------Cc
Confidence 2233331 22455678899999986 44433 2246888887 43
Q ss_pred C-CceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 251 L-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 251 ~-~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
+ ....+......+....|+||| +|+..+.+ ..|+++|+.+++..... ..
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----------g~v~iwd~~~~~~~~~~----------~~-------- 264 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGED-----------RTVRIWSKENGSLKQVI----------TL-------- 264 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEETT-----------SEEEEECTTTCCEEEEE----------EC--------
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEecC-----------CEEEEEECCCCceeEEE----------ec--------
Confidence 4 344555566778899999999 46655443 25888998775432110 00
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 369 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~ 369 (715)
....+..+.|++|++ ++ +...++ .|..+|+.+++.
T Consensus 265 -~~~~i~~~~~~~~~~-~~-~~~~dg--~i~iw~~~~~~~ 299 (313)
T 3odt_A 265 -PAISIWSVDCMSNGD-II-VGSSDN--LVRIFSQEKSRW 299 (313)
T ss_dssp -SSSCEEEEEECTTSC-EE-EEETTS--CEEEEESCGGGC
T ss_pred -cCceEEEEEEccCCC-EE-EEeCCC--cEEEEeCCCCce
Confidence 011345677999998 43 344444 455567666553
No 433
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.34 E-value=2.2e-05 Score=81.12 Aligned_cols=99 Identities=14% Similarity=0.044 Sum_probs=56.6
Q ss_pred ceeEcCCCCeEEEEecCCCCCCCCc-cccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccC
Q 005093 265 FPRFSPDGKFLVFLSAKSSVDSGAH-SATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 343 (715)
Q Consensus 265 ~~~~spdg~~l~~~~~~~~~~~g~~-~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 343 (715)
..+++|||++++.....+.. .+.+ .....|+++|+.+++... .+... ....+.|+||
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v~----------~i~~~-----------~p~~ia~spd 315 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRVA----------RIPGR-----------DALSMTIDQQ 315 (361)
T ss_dssp CEEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEEE----------EEECT-----------TCCEEEEETT
T ss_pred EEEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEEE----------EEecC-----------CeeEEEECCC
Confidence 36899999988655431110 0111 123479999988755311 00000 1346679999
Q ss_pred CCEEEEEeeeCCeeEEEEEECCCC--cEEEec-CCCCCceeEEEeecCC
Q 005093 344 GCTMLLSSIWGSSQVIISVNVSSG--ELLRIT-PAESNFSWSLLTLDGD 389 (715)
Q Consensus 344 g~~l~~~~~~~~~~~l~~~d~~tg--~~~~l~-~~~~~~~~~~~s~~~~ 389 (715)
|+.||.+ .. ..|..+|++++ +..... .....-....++|+|+
T Consensus 316 g~~l~v~-n~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 316 RNLMLTL-DG---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEE-CS---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCEEEEe-CC---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9966644 33 57778899999 655442 2222223456677765
No 434
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.33 E-value=0.00012 Score=73.59 Aligned_cols=264 Identities=11% Similarity=0.034 Sum_probs=136.9
Q ss_pred ccceEEeeCCCCceEEEEec----CCCCCCeEEEEe-cCCccEEEEecC-ccccccccCCCcccceeecCCCCeEEEEee
Q 005093 43 TGASAVVPSPSGSKLLVVRN----PENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
.....++|+|+|+ |+++.. .+.....++.+. .+++...+.... .+... ....+.++||+.+|++...
T Consensus 18 ~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~------~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 18 PGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGG------IPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp TTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEEC------CEEEEEECSSSSEEEEEET
T ss_pred CCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCC------CCceEEEecCCCcEEEEEC
Confidence 4567899999995 544410 000223577666 566655443200 00101 1268889999334555321
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEee-cCCCC---CCccceEEEe
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPK---SLSVGQVVWA 192 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l-~~~~~---~~~~~~~~~s 192 (715)
...|+++|++ |+.+.+ ..... ......+.++
T Consensus 91 --------------------------------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d 125 (314)
T 1pjx_A 91 --------------------------------------------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD 125 (314)
T ss_dssp --------------------------------------------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC
T ss_pred --------------------------------------------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC
Confidence 1358999998 776654 31111 1235678999
Q ss_pred cCCCCCccEEEEEeecCccceeeee-eeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCCCccccceeEc--
Q 005093 193 PLNEGLHQYLVFVGWSSETRKLGIK-YCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFS-- 269 (715)
Q Consensus 193 pdg~~~~~~i~~~~~~~~~~~~g~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~s-- 269 (715)
|||+ |++...........+. ........|++++. . ++.+.+..........+|+
T Consensus 126 ~~g~-----l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~-g~~~~~~~~~~~~~~i~~~~~ 182 (314)
T 1pjx_A 126 YEGN-----LWITAPAGEVAPADYTRSMQEKFGSIYCFTT-----------------D-GQMIQVDTAFQFPNGIAVRHM 182 (314)
T ss_dssp TTSC-----EEEEECBCBCTTSCCCBTTSSSCEEEEEECT-----------------T-SCEEEEEEEESSEEEEEEEEC
T ss_pred CCCC-----EEEEecCcccccccccccccCCCCeEEEECC-----------------C-CCEEEeccCCCCcceEEEecc
Confidence 9986 6665422100000000 00011246888885 4 5554443333345678899
Q ss_pred --CCCCeEEEEecCCCCCCCCccccceeEeeecC-CCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCE
Q 005093 270 --PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 346 (715)
Q Consensus 270 --pdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~ 346 (715)
|||+.|++..... ..|+++++. ++.... .... ....... + ..+..++++++|+
T Consensus 183 ~d~dg~~l~v~~~~~----------~~i~~~~~~~~g~~~~-----~~~~--~~~~~~~-~-----~~p~~i~~d~~G~- 238 (314)
T 1pjx_A 183 NDGRPYQLIVAETPT----------KKLWSYDIKGPAKIEN-----KKVW--GHIPGTH-E-----GGADGMDFDEDNN- 238 (314)
T ss_dssp TTSCEEEEEEEETTT----------TEEEEEEEEETTEEEE-----EEEE--EECCCCS-S-----CEEEEEEEBTTCC-
T ss_pred cCCCCCEEEEEECCC----------CeEEEEECCCCCcccc-----ceEE--EECCCCC-C-----CCCCceEECCCCC-
Confidence 9998777665432 358888865 222100 0000 0000000 0 0123466888886
Q ss_pred EEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 347 MLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 347 l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+++.... ...|+++|+++++. ..+...........++++++.|++.... ...|+++++.
T Consensus 239 l~v~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~ 298 (314)
T 1pjx_A 239 LLVANWG--SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQ 298 (314)
T ss_dssp EEEEEET--TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECS
T ss_pred EEEEEcC--CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCC
Confidence 6555432 24788899986654 3333222223334567787777766533 2468887765
No 435
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.33 E-value=5.1e-05 Score=80.46 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=61.2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+||+.++...... ......+..++|||||+. |+... .+..|.++|+
T Consensus 172 g~v~iwD~~~~~~~~~~-~~~~~~v~~v~wspdg~~----lasgs---------------~dg~v~iwd~---------- 221 (434)
T 2oit_A 172 GSIAVLQVTETVKVCAT-LPSTVAVTSVCWSPKGKQ----LAVGK---------------QNGTVVQYLP---------- 221 (434)
T ss_dssp SCEEEEEESSSEEEEEE-ECGGGCEEEEEECTTSSC----EEEEE---------------TTSCEEEECT----------
T ss_pred CeEEEEEcCCCcceeec-cCCCCceeEEEEcCCCCE----EEEEc---------------CCCcEEEEcc----------
Confidence 56999999888543221 122345778999999998 77654 2236778885
Q ss_pred hhhccCCCCCCceecCCC-------CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC
Q 005093 242 ELKESSSEDLPVVNLTES-------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 303 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~-------~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 303 (715)
.+.....+... ...+....|++++..++..+..+ |.......++++++...
T Consensus 222 -------~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d----g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 222 -------TLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD----GTLETSPDVVMALLPKK 279 (434)
T ss_dssp -------TCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT----CCSSSCCEEEEEECCCT
T ss_pred -------CCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC----CccCCCCceEEEEeccC
Confidence 32222222221 22577899999998876555443 11122345777777654
No 436
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.32 E-value=1.8e-05 Score=79.32 Aligned_cols=201 Identities=11% Similarity=0.031 Sum_probs=114.2
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC
Q 005093 100 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 179 (715)
Q Consensus 100 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~ 179 (715)
.++.|+|+++.|+++.. ....|+++|+++++.+.+.
T Consensus 16 Egp~w~~~~~~l~~~d~-------------------------------------------~~~~i~~~d~~~~~~~~~~- 51 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI-------------------------------------------PAKKVCRWDSFTKQVQRVT- 51 (297)
T ss_dssp EEEEEETTTTEEEEEET-------------------------------------------TTTEEEEEETTTCCEEEEE-
T ss_pred cCCeEECCCCEEEEEEC-------------------------------------------CCCEEEEEECCCCcEEEEe-
Confidence 58999999999988632 1267999999998876552
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC
Q 005093 180 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 259 (715)
Q Consensus 180 ~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 259 (715)
. ...+..+.++|||+. +... ...|+++|+ ++++.+.+...
T Consensus 52 -~-~~~~~~i~~~~dG~l-----~v~~----------------~~~l~~~d~-----------------~~g~~~~~~~~ 91 (297)
T 3g4e_A 52 -M-DAPVSSVALRQSGGY-----VATI----------------GTKFCALNW-----------------KEQSAVVLATV 91 (297)
T ss_dssp -C-SSCEEEEEEBTTSSE-----EEEE----------------TTEEEEEET-----------------TTTEEEEEEEC
T ss_pred -C-CCceEEEEECCCCCE-----EEEE----------------CCeEEEEEC-----------------CCCcEEEEEec
Confidence 2 234667899999984 4332 126888986 66666555332
Q ss_pred -----CccccceeEcCCCCeEEEEecCCCCCC-CCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccC
Q 005093 260 -----ISSAFFPRFSPDGKFLVFLSAKSSVDS-GAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 333 (715)
Q Consensus 260 -----~~~~~~~~~spdg~~l~~~~~~~~~~~-g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~ 333 (715)
........++|||+ |++......... ........||+++..+ ....+.... .
T Consensus 92 ~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~-------------~------- 149 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQV-------------D------- 149 (297)
T ss_dssp CTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEE-------------S-------
T ss_pred CCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecc-------------c-------
Confidence 12356788999998 656553321000 0001234688887542 221111000 0
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEEC--CCCcEE--E-ecC---CCCCceeEEEeecCCEEEEEEeCCCCCCeEE
Q 005093 334 SILSNPWLSDGCTMLLSSIWGSSQVIISVNV--SSGELL--R-ITP---AESNFSWSLLTLDGDNIIAVSSSPVDVPQVK 405 (715)
Q Consensus 334 ~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~--~tg~~~--~-l~~---~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~ 405 (715)
....++|+|||+.+|+.....+ .|+++++ .+|... + +.. ..+......++++| .|++..... ..|+
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~--~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~---~~v~ 223 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSY--SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNG---GRVI 223 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGT--EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETT---TEEE
T ss_pred cccceEEcCCCCEEEEecCCCC--cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCC---CEEE
Confidence 1245689999998887765444 5666654 577642 2 211 11111223445555 455444332 3477
Q ss_pred EEeeccc
Q 005093 406 YGYFVDK 412 (715)
Q Consensus 406 ~~~~~~~ 412 (715)
+++..++
T Consensus 224 ~~d~~tG 230 (297)
T 3g4e_A 224 RLDPVTG 230 (297)
T ss_dssp EECTTTC
T ss_pred EEcCCCc
Confidence 7775433
No 437
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.29 E-value=0.00016 Score=75.20 Aligned_cols=178 Identities=11% Similarity=-0.006 Sum_probs=109.8
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++++++..+.+. ...-.....+++.+.+.. |+++.. ....|+++++
T Consensus 138 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----lY~~d~--------------~~~~I~~~~~---------- 188 (386)
T 3v65_B 138 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 188 (386)
T ss_dssp TEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTE----EEEEET--------------TTTEEEECBT----------
T ss_pred CcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCe----EEEEcC--------------CCCeEEEEeC----------
Confidence 67999999988766552 222224557788888877 777642 2237888886
Q ss_pred hhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
++...+.+.. ........+++|++..|+|+.... ...|+++++++...+.+....
T Consensus 189 -------dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~~-------- 244 (386)
T 3v65_B 189 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADTH-------- 244 (386)
T ss_dssp -------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECSS--------
T ss_pred -------CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC---------CCEEEEEeCCCCCcEEEEECC--------
Confidence 5544444433 334567789999999998886442 246999998764432221100
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCC
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
.. .+..++|++++..||++-. ....|+++|++++..+.+...... .-..++.+++.||++.. .
T Consensus 245 ----~~-------~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~---~ 307 (386)
T 3v65_B 245 ----LF-------WPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDW---H 307 (386)
T ss_dssp ----CS-------CEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSCEEEECSSCS-SEEEEEEETTEEEEEET---T
T ss_pred ----CC-------CeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEEECCCC-CceEEEEECCEEEEeeC---C
Confidence 00 1345678888888888643 446899999976655555433221 22344556777777653 3
Q ss_pred CCeEEEEee
Q 005093 401 VPQVKYGYF 409 (715)
Q Consensus 401 p~~l~~~~~ 409 (715)
...|.+++.
T Consensus 308 ~~~V~~~~~ 316 (386)
T 3v65_B 308 TKSINSANK 316 (386)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEC
Confidence 345777763
No 438
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.27 E-value=0.00052 Score=70.23 Aligned_cols=178 Identities=11% Similarity=-0.007 Sum_probs=109.5
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++++++..+.+. ...-.....+++.+.+.. |+++.. ....|+++++
T Consensus 95 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~---------- 145 (349)
T 3v64_C 95 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 145 (349)
T ss_dssp TEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET----------
T ss_pred CceEEEecCCCCceEEE-eCCCCCccEEEEecCCCe----EEEEcC--------------CCCeEEEEcC----------
Confidence 67999999988766652 122223457788887777 777642 2237999997
Q ss_pred hhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
++...+.+.. ........+++|++..|+|+.... ...|+++++++...+.+....
T Consensus 146 -------dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~~-------- 201 (349)
T 3v64_C 146 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADTH-------- 201 (349)
T ss_dssp -------TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEESCCSS--------
T ss_pred -------CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC---------CCEEEEEeCCCCCcEEEEECC--------
Confidence 5544444433 334567789999988898887542 246999998775443221100
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCC
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
.. .+..+++++++..||++-. +...|+++|++++..+.+...... .-..++.+++.|+++...
T Consensus 202 ----~~-------~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~~--- 264 (349)
T 3v64_C 202 ----LF-------WPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDWH--- 264 (349)
T ss_dssp ----CS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTEEEEEETT---
T ss_pred ----CC-------CcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEEeCCCC-CceEEEEECCEEEEecCC---
Confidence 00 1345678888888888643 446899999976655555433221 122344466777776532
Q ss_pred CCeEEEEee
Q 005093 401 VPQVKYGYF 409 (715)
Q Consensus 401 p~~l~~~~~ 409 (715)
...|.+++.
T Consensus 265 ~~~V~~~~~ 273 (349)
T 3v64_C 265 TKSINSANK 273 (349)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEc
Confidence 335777663
No 439
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.26 E-value=0.00025 Score=71.51 Aligned_cols=230 Identities=8% Similarity=-0.044 Sum_probs=133.9
Q ss_pred eEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCC
Q 005093 56 KLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 134 (715)
Q Consensus 56 ~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 134 (715)
.|+|.... .+..++ .+++...+....... .++.|++++++|++.-.
T Consensus 3 ~ll~~~~~-----~I~~i~~~~~~~~~~~~~~~~p----------~g~~~d~~~~~ly~~D~------------------ 49 (316)
T 1ijq_A 3 YLFFTNRH-----EVRKMTLDRSEYTSLIPNLRNV----------VALDTEVASNRIYWSDL------------------ 49 (316)
T ss_dssp EEEEECBS-----SEEEEETTSCCCEEEECSCSSE----------EEEEEETTTTEEEEEET------------------
T ss_pred EEEEECCC-----eEEEEECCCcceEehhcCCCce----------EEEEEEeCCCEEEEEEC------------------
Confidence 45555333 477777 555555544322222 58999999988877521
Q ss_pred CCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC----CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCc
Q 005093 135 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS----GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSE 210 (715)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~----g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~ 210 (715)
....|+++++++ .....+. ...-.....+++.+.+.. |+++..
T Consensus 50 -------------------------~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavd~~~~~----ly~~d~--- 96 (316)
T 1ijq_A 50 -------------------------SQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--- 96 (316)
T ss_dssp -------------------------TTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTE----EEEEET---
T ss_pred -------------------------CCCcEEEEECCCCCCCcccEEEE-eCCCCCcCEEEEeecCCe----EEEEEC---
Confidence 126799999886 3333331 111123557788887776 776642
Q ss_pred cceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEecCCCCCCCCc
Q 005093 211 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAH 289 (715)
Q Consensus 211 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~ 289 (715)
....|.++++ ++...+.+.. ........+++|++.+|+|+....
T Consensus 97 -----------~~~~I~~~~~-----------------~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------- 141 (316)
T 1ijq_A 97 -----------VLGTVSVADT-----------------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------- 141 (316)
T ss_dssp -----------TTTEEEEEET-----------------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-------
T ss_pred -----------CCCEEEEEeC-----------------CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC-------
Confidence 2247889996 5554444433 334567788999888898876431
Q ss_pred cccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 005093 290 SATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 369 (715)
Q Consensus 290 ~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~ 369 (715)
...|+++++++...+.+... ... .+..++|++++..||++-. ...+|+++|+++...
T Consensus 142 --~~~I~~~~~dG~~~~~~~~~------------~~~-------~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~~ 198 (316)
T 1ijq_A 142 --PAKIKKGGLNGVDIYSLVTE------------NIQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR 198 (316)
T ss_dssp --SCEEEEEETTSCCEEEEECS------------SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC
T ss_pred --CCeEEEEcCCCCCeEEEEEC------------CCC-------CceEEEEeccCCEEEEEEC--CCCeEEEEecCCCce
Confidence 24699998876432211100 000 2346678888888888643 446899999987666
Q ss_pred EEecCCC-CCceeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 370 LRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 370 ~~l~~~~-~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+.+.... ....-..++.+++.++++.. ...+|++++..++
T Consensus 199 ~~~~~~~~~~~~P~giav~~~~ly~~d~---~~~~V~~~~~~~g 239 (316)
T 1ijq_A 199 KTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTG 239 (316)
T ss_dssp EEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTC
T ss_pred EEEeecCCccCCcEEEEEECCEEEEEEC---CCCeEEEEeCCCC
Confidence 6554322 11112345556778877652 3356888775444
No 440
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.21 E-value=4.2e-05 Score=81.89 Aligned_cols=115 Identities=10% Similarity=0.066 Sum_probs=68.7
Q ss_pred ccceEEeeCC-----CCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceee-c-CCCCeEEEE
Q 005093 43 TGASAVVPSP-----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISW-N-SDETLIAYV 114 (715)
Q Consensus 43 ~~~~~~~~Sp-----dg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-S-pDg~~la~~ 114 (715)
|..-.|..|. ||++|. +.+. .+..+..|+ +..+..+++.++.+. ...++++ + ||+++++..
T Consensus 85 gd~hh~~~s~t~g~~DG~~lf-Vnd~--~~~rVavIdl~t~~~~~ii~ip~g~--------~phg~~~~~~p~~~~v~~~ 153 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFLF-MNDK--ANTRVARVRCDVMKCDAILEIPNAK--------GIHGLRPQKWPRSNYVFCN 153 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEEE-EEET--TTTEEEEEETTTTEEEEEEECSSCC--------SEEEEEECCSSBCSEEEEE
T ss_pred CCCCccccCCCCCCcCCCEEE-EEcC--CCCEEEEEECCCceEeeEEeCCCCC--------CCcceeeeecCCCcEEEEe
Confidence 5566688888 998875 5332 566788888 666777777765432 1147776 6 999998554
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEe-ecCCCCCCccceEEEec
Q 005093 115 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAP 193 (715)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~~~~~~~~~~sp 193 (715)
.+...+- .+. +...+.++ .....+-++|.++.++.. +. ..+ .......||
T Consensus 154 ~~~~~p~--------~~d-----------g~~l~~~~-------~~~~~vtvID~~t~~v~~qI~-Vgg--~pd~~~~sp 204 (595)
T 1fwx_A 154 GEDETPL--------VND-----------GTNMEDVA-------NYVNVFTAVDADKWEVAWQVL-VSG--NLDNCDADY 204 (595)
T ss_dssp ECSCEES--------SCS-----------SSSTTCGG-------GEEEEEEEEETTTTEEEEEEE-ESS--CCCCEEECS
T ss_pred ccccccc--------CCC-----------Cccccccc-------ccCceEEEEECCCCeEEEEEE-eCC--CccceEECC
Confidence 3322100 000 11111111 134679999999887643 31 122 355678999
Q ss_pred CCCC
Q 005093 194 LNEG 197 (715)
Q Consensus 194 dg~~ 197 (715)
||+.
T Consensus 205 dGk~ 208 (595)
T 1fwx_A 205 EGKW 208 (595)
T ss_dssp SSSE
T ss_pred CCCE
Confidence 9995
No 441
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.19 E-value=0.00021 Score=70.05 Aligned_cols=237 Identities=7% Similarity=-0.022 Sum_probs=124.3
Q ss_pred cceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 005093 44 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 123 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 123 (715)
.....+++|||+ |+++... ....++.+..++.......... . .....+.++|||+ |++. ..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~-~-------~~p~~i~~~~~g~-l~v~-~~------ 85 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEG--MYGRVVKLATGSTGTTVLPFNG-L-------YQPQGLAVDGAGT-VYVT-DF------ 85 (270)
T ss_dssp CEEEEEECTTCC-EEEEECS--SSCEEEEECC-----EECCCCS-C-------CSCCCEEECTTCC-EEEE-ET------
T ss_pred CccceEECCCCC-EEEEccC--CCCcEEEecCCCcccceEeeCC-c-------CCcceeEECCCCC-EEEE-cC------
Confidence 567889999997 5441433 2235666653332222221111 0 1226889999997 5443 21
Q ss_pred CccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEE
Q 005093 124 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~ 203 (715)
...|+++|.+++....+. .........+.++|+|+ |+
T Consensus 86 -------------------------------------~~~i~~~d~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~ 122 (270)
T 1rwi_B 86 -------------------------------------NNRVVTLAAGSNNQTVLP-FDGLNYPEGLAVDTQGA-----VY 122 (270)
T ss_dssp -------------------------------------TTEEEEECTTCSCCEECC-CCSCSSEEEEEECTTCC-----EE
T ss_pred -------------------------------------CCEEEEEeCCCceEeeee-cCCcCCCcceEECCCCC-----EE
Confidence 146888998877665552 12223456788999886 55
Q ss_pred EEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEecCC
Q 005093 204 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKS 282 (715)
Q Consensus 204 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~~~ 282 (715)
++.. ....|++++. .+........ ........+++|||+ |+++...
T Consensus 123 v~~~--------------~~~~i~~~~~-----------------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~- 169 (270)
T 1rwi_B 123 VADR--------------GNNRVVKLAA-----------------GSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD- 169 (270)
T ss_dssp EEEG--------------GGTEEEEECT-----------------TCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG-
T ss_pred EEEC--------------CCCEEEEEEC-----------------CCceeEeeccccCCCceeEEEeCCCC-EEEEECC-
Confidence 5431 1236888874 3333222222 223467789999997 5554432
Q ss_pred CCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 005093 283 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 362 (715)
Q Consensus 283 ~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~ 362 (715)
...|++++..+......... .+ ..+..+++.++|. ++++... ...|+++
T Consensus 170 ---------~~~i~~~~~~~~~~~~~~~~--------------~~-----~~p~~i~~d~~g~-l~v~~~~--~~~v~~~ 218 (270)
T 1rwi_B 170 ---------NNRVVKLEAESNNQVVLPFT--------------DI-----TAPWGIAVDEAGT-VYVTEHN--TNQVVKL 218 (270)
T ss_dssp ---------GTEEEEECTTTCCEEECCCS--------------SC-----CSEEEEEECTTCC-EEEEETT--TSCEEEE
T ss_pred ---------CCEEEEEecCCCceEeeccc--------------CC-----CCceEEEECCCCC-EEEEECC--CCcEEEE
Confidence 23588898766432111000 00 0233556788884 6665432 3468888
Q ss_pred ECCCCcEEEecCCC-CCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 363 NVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 363 d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
++++.....+.... .......++++|+ ++++.... ..|.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~---~~v~~~~~~ 263 (270)
T 1rwi_B 219 LAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN---DRVVKLTSL 263 (270)
T ss_dssp CTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG---TEEEEECCC
T ss_pred cCCCCcceeeccCCCCCceeEEECCCCC-EEEEECCC---CEEEEEcCC
Confidence 98766555443222 1122234555553 55444322 245555543
No 442
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.18 E-value=0.0002 Score=73.44 Aligned_cols=162 Identities=9% Similarity=0.052 Sum_probs=106.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.....++|+|.+..|+++.. ....|+.+. .++..+.+...... ...++++.+.+..|++.-.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~---~~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~ly~~d~----- 135 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDV---TLDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDKLYWTDS----- 135 (349)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTTEEEEEET-----
T ss_pred CceEEEEEeccccEEEEEec---cCCceEEEecCCCCceEEEeCCCC---------CccEEEEecCCCeEEEEcC-----
Confidence 45678899999888877643 234677777 55454444332111 1158889888888877521
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
....|+++++++...+.+. ...-.....+++.|++..
T Consensus 136 --------------------------------------~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~---- 172 (349)
T 3v64_C 136 --------------------------------------GTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGT---- 172 (349)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTE----
T ss_pred --------------------------------------CCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCe----
Confidence 1267999999887666552 122234567889998876
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEec
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+++.+.. ...|+++++ ++...+.+.. .......++++|++++|+|+..
T Consensus 173 ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 173 IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEEEECSS-------------SCEEEEEET-----------------TSCSCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 77765321 247999997 5555555433 3334678999999999998875
Q ss_pred CCCCCCCCccccceeEeeecCCCC
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
.. ..|+++++++..
T Consensus 223 ~~----------~~I~~~~~dG~~ 236 (349)
T 3v64_C 223 KH----------HVIERANLDGSH 236 (349)
T ss_dssp TT----------TEEEEEETTSCS
T ss_pred CC----------CEEEEEeCCCCc
Confidence 43 469999987643
No 443
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.18 E-value=0.00029 Score=70.98 Aligned_cols=185 Identities=9% Similarity=0.029 Sum_probs=113.8
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCcc-EEEEecC-ccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVP-QTVHG 91 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~~ 91 (715)
...|+.+++++...+.+.+ ...........|.+.++.|+++.. ....|+.+. .++.. ..+.... ...
T Consensus 12 ~~~I~~i~l~~~~~~~~~~-----~~~~~~~~~ld~d~~~~~lyw~D~---~~~~I~r~~~~g~~~~~~~~~~~l~~p-- 81 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIV-----VGGLEDAAAVDFVFSHGLIYWSDV---SEEAIKRTEFNKTESVQNVVVSGLLSP-- 81 (318)
T ss_dssp EEEEEEEETTCTTSCCEEE-----EEEEEEEEEEEEEGGGTEEEEEET---TTTEEEEEETTSSSCCCEEEEECCSCC--
T ss_pred cCeEEEEECCCCceEEEEE-----ecCCCccEEEEEEeCCCEEEEEEC---CCCcEEEEEccCCCceEEEEcCCCCCc--
Confidence 4578887776654221111 112244667889998888877643 234677777 44422 2222211 122
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
.++++.+.+..|++. +. ....|.++++++
T Consensus 82 --------~glavd~~~g~ly~~-d~------------------------------------------~~~~I~~~~~dG 110 (318)
T 3sov_A 82 --------DGLACDWLGEKLYWT-DS------------------------------------------ETNRIEVSNLDG 110 (318)
T ss_dssp --------CEEEEETTTTEEEEE-ET------------------------------------------TTTEEEEEETTS
T ss_pred --------cEEEEEcCCCeEEEE-EC------------------------------------------CCCEEEEEECCC
Confidence 578888888888764 21 126799999988
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
...+.+. ...-.....++..|++.. |+++.+. ....|+++++ ++.
T Consensus 111 ~~~~~l~-~~~~~~P~giavdp~~g~----ly~td~~-------------~~~~I~r~~~-----------------dG~ 155 (318)
T 3sov_A 111 SLRKVLF-WQELDQPRAIALDPSSGF----MYWTDWG-------------EVPKIERAGM-----------------DGS 155 (318)
T ss_dssp CSCEEEE-CSSCSSEEEEEEEGGGTE----EEEEECS-------------SSCEEEEEET-----------------TSC
T ss_pred CcEEEEE-eCCCCCccEEEEeCCCCE----EEEEecC-------------CCCEEEEEEc-----------------CCC
Confidence 7666552 122224567788888776 7766421 2247999997 554
Q ss_pred Cceec-CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 252 PVVNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 252 ~~~~l-t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
..+.+ .........++|+|++++|+|+.... ..|+++++++...
T Consensus 156 ~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~----------~~I~~~d~dG~~~ 200 (318)
T 3sov_A 156 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKL----------NFIHKSNLDGTNR 200 (318)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTT----------TEEEEEETTSCSC
T ss_pred CeEEEEECCCCCccEEEEeccCCEEEEEECCC----------CEEEEEcCCCCce
Confidence 44444 33334567899999999999987553 4699999876443
No 444
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.18 E-value=0.00011 Score=76.45 Aligned_cols=161 Identities=9% Similarity=0.062 Sum_probs=104.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.....++|.+++.+|+++.. ....|+.+. .++..+.+...... ...++++.+.+..|++.-.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~---~~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~lY~~d~----- 178 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDV---TLDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDKLYWTDS----- 178 (386)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCCEEEEECSSCS---------CCCCEEEETTTTEEEEEET-----
T ss_pred CccEEEEEecCCCeEEEEeC---CCCcEEEEecCCCCcEEEEeCCCC---------CccEEEEEeCCCeEEEEcC-----
Confidence 55778899999888877643 234677777 44444444322111 1157889988888877521
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCC-CccceEEEecCCCCCcc
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 200 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~-~~~~~~~~spdg~~~~~ 200 (715)
....|+++++++...+.+ .... .....+++.|++..
T Consensus 179 --------------------------------------~~~~I~~~~~dg~~~~~l--~~~~l~~P~giavdp~~g~--- 215 (386)
T 3v65_B 179 --------------------------------------GTSRIEVANLDGAHRKVL--LWQSLEKPRAIALHPMEGT--- 215 (386)
T ss_dssp --------------------------------------TTTEEEECBTTSCSCEEE--ECSSCSCEEEEEEETTTTE---
T ss_pred --------------------------------------CCCeEEEEeCCCCceEEe--ecCCCCCCcEEEEEcCCCe---
Confidence 125688888887765555 2222 34567889998887
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-CCCccccceeEcCCCCeEEEEe
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l~~~~ 279 (715)
|+++.+.. ...|+++++ ++...+.+. ........++|+|++++|+|+.
T Consensus 216 -ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 216 -IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp -EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred -EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 77764311 247999997 554444443 3333567899999999999887
Q ss_pred cCCCCCCCCccccceeEeeecCCCC
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
... ..|+++++++..
T Consensus 265 ~~~----------~~I~~~d~dG~~ 279 (386)
T 3v65_B 265 AKH----------HVIERANLDGSH 279 (386)
T ss_dssp TTT----------TEEEEECTTSCS
T ss_pred CCC----------CEEEEEeCCCCe
Confidence 553 469999987643
No 445
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.16 E-value=0.00078 Score=67.52 Aligned_cols=228 Identities=13% Similarity=0.115 Sum_probs=119.1
Q ss_pred ceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 45 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 45 ~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
...++|+|+|+ |+++ +. ....++.+...+............ .++.++|||+ | |+++..
T Consensus 34 pegia~~~~g~-lyv~-d~--~~~~I~~~d~~g~~~~~~~~~~~p----------~gia~~~dG~-l-~vad~~------ 91 (306)
T 2p4o_A 34 LENLASAPDGT-IFVT-NH--EVGEIVSITPDGNQQIHATVEGKV----------SGLAFTSNGD-L-VATGWN------ 91 (306)
T ss_dssp EEEEEECTTSC-EEEE-ET--TTTEEEEECTTCCEEEEEECSSEE----------EEEEECTTSC-E-EEEEEC------
T ss_pred cceEEECCCCC-EEEE-eC--CCCeEEEECCCCceEEEEeCCCCc----------eeEEEcCCCc-E-EEEecc------
Confidence 46789999987 5444 43 233678777445544444443333 6899999998 5 444321
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 204 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~ 204 (715)
. ....|+.++..+|+.+.+...+...........+++ . ++
T Consensus 92 -----------------------------~-----~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~----~~- 131 (306)
T 2p4o_A 92 -----------------------------A-----DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-Q----YL- 131 (306)
T ss_dssp -----------------------------T-----TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-E----EE-
T ss_pred -----------------------------C-----CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-c----EE-
Confidence 0 114588888888887665211111112233333333 2 33
Q ss_pred EeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC--ce---------ecCCCCccccceeEcCCCC
Q 005093 205 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP--VV---------NLTESISSAFFPRFSPDGK 273 (715)
Q Consensus 205 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~lt~~~~~~~~~~~spdg~ 273 (715)
.... ....||++|. .++. .. ...........+ +|||+
T Consensus 132 v~d~-------------~~g~i~~~d~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 132 TADS-------------YRGAIWLIDV-----------------VQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp EEET-------------TTTEEEEEET-----------------TTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred EEEC-------------CCCeEEEEeC-----------------CCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 3321 2347888885 3221 11 000111112223 89999
Q ss_pred eEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeee
Q 005093 274 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 353 (715)
Q Consensus 274 ~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~ 353 (715)
+|+++.... ..|+++++++.+. +... ...... ..+..+++.+||+ ||+...
T Consensus 180 ~lyv~d~~~----------~~I~~~~~~~~g~--~~~~-~~~~~~--------------~~P~gi~vd~dG~-l~va~~- 230 (306)
T 2p4o_A 180 FLYVSNTEK----------MLLLRIPVDSTDK--PGEP-EIFVEQ--------------TNIDDFAFDVEGN-LYGATH- 230 (306)
T ss_dssp EEEEEETTT----------TEEEEEEBCTTSC--BCCC-EEEEES--------------CCCSSEEEBTTCC-EEEECB-
T ss_pred EEEEEeCCC----------CEEEEEEeCCCCC--CCcc-EEEecc--------------CCCCCeEECCCCC-EEEEeC-
Confidence 887766442 4699999875221 1100 000000 1245677888996 555433
Q ss_pred CCeeEEEEEECCCCcEEEe---cCCCCCceeEEEe---ecCCEEEEEEeC
Q 005093 354 GSSQVIISVNVSSGELLRI---TPAESNFSWSLLT---LDGDNIIAVSSS 397 (715)
Q Consensus 354 ~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s---~~~~~l~~~~~~ 397 (715)
+..+|.+++.+ |+...+ ...........|. ++++.||++...
T Consensus 231 -~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 -IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -CCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 23468889985 665443 2221112334555 677888877654
No 446
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.14 E-value=0.00016 Score=69.98 Aligned_cols=179 Identities=17% Similarity=0.120 Sum_probs=102.5
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.++|+++|++..-...... .....++++|++ |+...+ ....++++|.
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~--~fgeGi~~~g~~----lyv~t~--------------~~~~v~viD~---------- 93 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDS--YFGEGLTLLNEK----LYQVVW--------------LKNIGFIYDR---------- 93 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTE----EEEEET--------------TCSEEEEEET----------
T ss_pred CEEEEEECCCCCEEEEEecCCC--cceEEEEEeCCE----EEEEEe--------------cCCEEEEEEC----------
Confidence 7899999999987654111221 122235556776 666654 2237999996
Q ss_pred hhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeeeeece
Q 005093 242 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~ 319 (715)
++.+. ..+.-. .......++||++|+ .++.+ ..|+++|..+.+.. .+.-+.
T Consensus 94 -------~t~~v~~~i~~g--~~~g~glt~Dg~~l~-vs~gs----------~~l~viD~~t~~v~~~I~Vg~------- 146 (266)
T 2iwa_A 94 -------RTLSNIKNFTHQ--MKDGWGLATDGKILY-GSDGT----------SILYEIDPHTFKLIKKHNVKY------- 146 (266)
T ss_dssp -------TTTEEEEEEECC--SSSCCEEEECSSSEE-EECSS----------SEEEEECTTTCCEEEEEECEE-------
T ss_pred -------CCCcEEEEEECC--CCCeEEEEECCCEEE-EECCC----------CeEEEEECCCCcEEEEEEECC-------
Confidence 55433 334322 112244788999886 45432 36999998775431 111110
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--------------CCceeEEEe
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLT 385 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--------------~~~~~~~~s 385 (715)
.+ .+ ...+..+.|. || .+|... + ....|..+|++++++.....-. .......++
T Consensus 147 ----~~-~p---~~~~nele~~-dg-~lyvn~-~-~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 147 ----NG-HR---VIRLNELEYI-NG-EVWANI-W-QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ----TT-EE---CCCEEEEEEE-TT-EEEEEE-T-TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred ----CC-cc---cccceeEEEE-CC-EEEEec-C-CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 00 00 0012234566 66 466443 2 2458999999999976544321 112345788
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeeccc
Q 005093 386 LDGDNIIAVSSSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 386 ~~~~~l~~~~~~~~~p~~l~~~~~~~~ 412 (715)
+++++++++.... +.++.+++.+.
T Consensus 215 ~~~~~lfVTgk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLW---PKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEEEC
T ss_pred CCCCEEEEECCCC---CeEEEEEEecc
Confidence 8999988877443 56888887643
No 447
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.13 E-value=4.3e-05 Score=81.10 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=57.9
Q ss_pred ceEEEEEccCC-----ce-E---eecC-CCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEec
Q 005093 162 PSLFVININSG-----EV-Q---AVKG-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 231 (715)
Q Consensus 162 ~~l~~~~~~~g-----~~-~---~l~~-~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~ 231 (715)
..|.+||++++ +. + .+.. ......+..++|+|++.. ++.++.. +..|.++|+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~----~las~s~--------------Dg~v~iwD~ 179 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPS----MVAVCLA--------------DGSIAVLQV 179 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTT----EEEEEET--------------TSCEEEEEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCC----EEEEEEC--------------CCeEEEEEc
Confidence 67999999765 11 0 1110 112345778999999555 5555422 235777786
Q ss_pred ccccchhhhhhhhccCCCCCCce-ecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC
Q 005093 232 SLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 301 (715)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~ 301 (715)
.++... ........+...+|||||++|+..+.+. .|.++|..
T Consensus 180 -----------------~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg-----------~v~iwd~~ 222 (434)
T 2oit_A 180 -----------------TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG-----------TVVQYLPT 222 (434)
T ss_dssp -----------------SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS-----------CEEEECTT
T ss_pred -----------------CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC-----------cEEEEccC
Confidence 444322 2222344678899999999998777542 47788876
No 448
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.13 E-value=0.00071 Score=68.65 Aligned_cols=116 Identities=11% Similarity=0.051 Sum_probs=61.1
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 342 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 342 (715)
...++++||+..|+++.... ..|.+++..+++.... +...... ..+..+.++|
T Consensus 198 p~gia~d~~~g~l~v~d~~~----------~~I~~~~~~~G~~~~~----------~~~~~~~-------~~~~~~~~~p 250 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADREN----------GRIQCFKTDTKEFVRE----------IKHASFG-------RNVFAISYIP 250 (329)
T ss_dssp EEEEEEETTTTEEEEEETTT----------TEEEEEETTTCCEEEE----------ECCTTTT-------TCEEEEEEET
T ss_pred CcEEEEECCCCEEEEEECCC----------CEEEEEECCCCcEEEE----------EeccccC-------CCcceeeecC
Confidence 56788999977776665442 3688888875443110 0000000 0122344566
Q ss_pred CCCEEEEEee-----eCCeeEEEEEECCCCcEEEecCC----CCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 005093 343 DGCTMLLSSI-----WGSSQVIISVNVSSGELLRITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 411 (715)
Q Consensus 343 dg~~l~~~~~-----~~~~~~l~~~d~~tg~~~~l~~~----~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~~ 411 (715)
+ .++.... ......++.+|+.+|+....... ........++++| .|+++..... +|.++++..
T Consensus 251 -g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~---~I~~~~~~~ 322 (329)
T 3fvz_A 251 -G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTN---TVWKFTLTE 322 (329)
T ss_dssp -T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSC---CEEEEEEEE
T ss_pred -C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCC---EEEEEeCCc
Confidence 3 2222211 12344788999888887766421 1122334566766 6665553332 577777653
No 449
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.11 E-value=0.00065 Score=70.91 Aligned_cols=182 Identities=8% Similarity=-0.056 Sum_probs=108.8
Q ss_pred ceEEEEEccCC----ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~g----~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..|+.+++++. ....+. ...-.....+++.+.+.. |+++.. ....|.++++
T Consensus 134 ~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~----lY~~d~--------------~~~~I~~~~~------ 188 (400)
T 3p5b_L 134 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 188 (400)
T ss_dssp TEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTE----EEEEET--------------TTTEEEEECT------
T ss_pred CeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCc----eEEEEC--------------CCCeEEEEeC------
Confidence 56888888762 233331 222224556777776776 776642 2247889997
Q ss_pred hhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeee
Q 005093 238 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 316 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~ 316 (715)
++...+.+.. .......+++.|.+.+|+|+.... ...|+++++++...+.+....
T Consensus 189 -----------~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~~~~~~---- 244 (400)
T 3p5b_L 189 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTEN---- 244 (400)
T ss_dssp -----------TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS---------SCCEEEEETTSCSCEEEECSS----
T ss_pred -----------CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC---------CCEEEEEeCCCCccEEEEECC----
Confidence 5555555543 333467789999888898887432 135999998775443221100
Q ss_pred eceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeEEEeecCCEEEEEE
Q 005093 317 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~~~~~l~~~~ 395 (715)
.. .+..+++++++..||++- .....|+++|++++..+.+..... ...-..++.+++.||++.
T Consensus 245 --------l~-------~P~glavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 245 --------IQ-------WPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp --------CS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred --------CC-------ceEEEEEEeCCCEEEEEE--CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 00 234567888888888864 345689999998776666654322 112235666788888776
Q ss_pred eCCCCCCeEEEEeeccc
Q 005093 396 SSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 396 ~~~~~p~~l~~~~~~~~ 412 (715)
.. ...|++++..++
T Consensus 308 ~~---~~~V~~~~~~~G 321 (400)
T 3p5b_L 308 II---NEAIFSANRLTG 321 (400)
T ss_dssp SS---SCSEEEEESSSC
T ss_pred CC---CCeEEEEEcCCC
Confidence 32 345777774444
No 450
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.11 E-value=0.00031 Score=70.29 Aligned_cols=43 Identities=9% Similarity=0.151 Sum_probs=27.5
Q ss_pred cCceEEEEEccCCceE-eecCCC-CCCccceEEEecCCCCCccEEEEEe
Q 005093 160 RQPSLFVININSGEVQ-AVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVG 206 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~-~l~~~~-~~~~~~~~~~spdg~~~~~~i~~~~ 206 (715)
....|.+||+++|+.. .+.+.. ....+...+|||||+. ++...
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~----lvs~s 245 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLL----FIVLS 245 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEE----EEEEC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCE----EEEec
Confidence 3588999999999854 442111 1123445689999997 76544
No 451
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.07 E-value=0.00052 Score=69.21 Aligned_cols=181 Identities=9% Similarity=0.098 Sum_probs=109.7
Q ss_pred EEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cC----CccEEEEecCccccc
Q 005093 17 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ----SQLEKEFHVPQTVHG 91 (715)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~ 91 (715)
.|..+|+++... ..+. ........+.|++++++|+++... ...|+.+. .+ +....+.. ...
T Consensus 11 ~I~~i~~~~~~~--~~~~-----~~~~~p~g~~~d~~~~~ly~~D~~---~~~I~~~~~~g~~~~~~~~~~~~--~~~-- 76 (316)
T 1ijq_A 11 EVRKMTLDRSEY--TSLI-----PNLRNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVIS--RDI-- 76 (316)
T ss_dssp SEEEEETTSCCC--EEEE-----CSCSSEEEEEEETTTTEEEEEETT---TTEEEEEEC--------CEEEEC--SSC--
T ss_pred eEEEEECCCcce--Eehh-----cCCCceEEEEEEeCCCEEEEEECC---CCcEEEEECCCCCCCcccEEEEe--CCC--
Confidence 466766655432 2221 123567889999999888777442 34677777 33 22233322 111
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccC
Q 005093 92 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 171 (715)
Q Consensus 92 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 171 (715)
....++++.+.++.|++.-. ....|.++++++
T Consensus 77 -----~~p~glavd~~~~~ly~~d~-------------------------------------------~~~~I~~~~~~g 108 (316)
T 1ijq_A 77 -----QAPDGLAVDWIHSNIYWTDS-------------------------------------------VLGTVSVADTKG 108 (316)
T ss_dssp -----SCCCEEEEETTTTEEEEEET-------------------------------------------TTTEEEEEETTS
T ss_pred -----CCcCEEEEeecCCeEEEEEC-------------------------------------------CCCEEEEEeCCC
Confidence 01268888888888866421 126789999987
Q ss_pred CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCC
Q 005093 172 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 251 (715)
Q Consensus 172 g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (715)
...+.+. ...-.....++..|++.. |+++.+. ....|+++++ ++.
T Consensus 109 ~~~~~~~-~~~~~~P~~iavdp~~g~----ly~~d~~-------------~~~~I~~~~~-----------------dG~ 153 (316)
T 1ijq_A 109 VKRKTLF-RENGSKPRAIVVDPVHGF----MYWTDWG-------------TPAKIKKGGL-----------------NGV 153 (316)
T ss_dssp SSEEEEE-ECTTCCEEEEEEETTTTE----EEEEECS-------------SSCEEEEEET-----------------TSC
T ss_pred CceEEEE-ECCCCCcceEEeCCCCCE----EEEEccC-------------CCCeEEEEcC-----------------CCC
Confidence 7665552 112224567788998876 7766421 1247999996 444
Q ss_pred CceecC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 252 PVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 252 ~~~~lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
..+.+. ........++|+|++++|+|+.... ..|+++++++..
T Consensus 154 ~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~----------~~I~~~d~dg~~ 197 (316)
T 1ijq_A 154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL----------HSISSIDVNGGN 197 (316)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTT----------TEEEEEETTSCS
T ss_pred CeEEEEECCCCCceEEEEeccCCEEEEEECCC----------CeEEEEecCCCc
Confidence 444443 2334567789999999999887553 469999987643
No 452
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.06 E-value=5.4e-05 Score=76.08 Aligned_cols=174 Identities=11% Similarity=0.044 Sum_probs=107.5
Q ss_pred CCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCC
Q 005093 171 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 250 (715)
Q Consensus 171 ~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 250 (715)
+.+++.+ .........+.|+|||+. |+|+.. ....|++++. +
T Consensus 34 ~~~~~~l--~~~~~~~egp~~~~~g~~----l~~~d~--------------~~~~i~~~~~------------------~ 75 (305)
T 3dr2_A 34 DARLLTL--YDQATWSEGPAWWEAQRT----LVWSDL--------------VGRRVLGWRE------------------D 75 (305)
T ss_dssp TCCCEEE--ECCCSSEEEEEEEGGGTE----EEEEET--------------TTTEEEEEET------------------T
T ss_pred CCceEEE--ecCCcCccCCeEeCCCCE----EEEEEC--------------CCCEEEEEeC------------------C
Confidence 4566666 344445678999999998 888762 2346888884 3
Q ss_pred CCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCcccc
Q 005093 251 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 330 (715)
Q Consensus 251 ~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~ 330 (715)
++.+.+.........+.+++||+ |+..... ...|++++.+ +..+.+.... ...
T Consensus 76 g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~~----------~~~v~~~~~~-g~~~~~~~~~----------~~~----- 128 (305)
T 3dr2_A 76 GTVDVLLDATAFTNGNAVDAQQR-LVHCEHG----------RRAITRSDAD-GQAHLLVGRY----------AGK----- 128 (305)
T ss_dssp SCEEEEEESCSCEEEEEECTTSC-EEEEETT----------TTEEEEECTT-SCEEEEECEE----------TTE-----
T ss_pred CCEEEEeCCCCccceeeECCCCC-EEEEECC----------CCEEEEECCC-CCEEEEEecc----------CCC-----
Confidence 45555555555677889999998 4444332 1358888865 3332221110 000
Q ss_pred ccCCCCCCccccCCCEEEEEee---------------eCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEE
Q 005093 331 YSSSILSNPWLSDGCTMLLSSI---------------WGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 331 ~~~~~~~~~~~~dg~~l~~~~~---------------~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~ 395 (715)
-...+..+.+.+||+ ++++.. ..+...||++|+++|+.+.+. .........++++++.|+++.
T Consensus 129 ~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 129 RLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp ECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEE
T ss_pred ccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEe
Confidence 011345678899997 767521 012468999999889888776 322223457889998887765
Q ss_pred eCC--CCCCeEEEEeecc
Q 005093 396 SSP--VDVPQVKYGYFVD 411 (715)
Q Consensus 396 ~~~--~~p~~l~~~~~~~ 411 (715)
... .....|+++++..
T Consensus 207 ~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 207 TPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp CCC---CCCEEEEEEEET
T ss_pred cCCcCCCCCEEEEEEecC
Confidence 431 1235788888753
No 453
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.06 E-value=0.002 Score=65.68 Aligned_cols=111 Identities=9% Similarity=-0.022 Sum_probs=57.4
Q ss_pred ccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCcccc
Q 005093 263 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 342 (715)
Q Consensus 263 ~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 342 (715)
...++|||||+.|++..... ..||+++........++.. .+...+.. .| .......+++++
T Consensus 197 ~~gia~s~dg~~ly~~~~~~----------~~l~~~~~~~~~~~~~~~~--~~~~~~~~------~g-~~g~pdgia~d~ 257 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHS----------TSMYRIKSADLSNLQLTDA--ELGSKIER------YS-EKPICDGISIDK 257 (343)
T ss_dssp EEEEEECTTSCEEEEEESSC----------SEEEEEEHHHHTCTTCCHH--HHHTTCEE------EE-ECCSCSCEEECT
T ss_pred cceeEeccCCCEEEEEeCCC----------CeEEEEEHHHhcCCCCChh--hhhcceEe------cc-cCCCCceEEECC
Confidence 45689999999998876542 3688887532110011100 00000000 00 001234677888
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--CceeEEEeecCCEEEEEEe
Q 005093 343 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSS 396 (715)
Q Consensus 343 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--~~~~~~~s~~~~~l~~~~~ 396 (715)
+|+ +|++... ...|.++|.++|+...+..... ......++++ +.++++.+
T Consensus 258 ~G~-l~va~~~--~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~ 309 (343)
T 2qe8_A 258 DHN-IYVGDLA--HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCN 309 (343)
T ss_dssp TCC-EEEEEGG--GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEEC
T ss_pred CCC-EEEEccC--CCeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeC
Confidence 986 6665432 3589999986677766654321 1122345554 45665554
No 454
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.06 E-value=0.00029 Score=73.62 Aligned_cols=164 Identities=10% Similarity=0.112 Sum_probs=103.1
Q ss_pred cccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cC----CccEEEEecCccccccccCCCcccceeecCCCCeEEEEee
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ----SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 116 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~ 116 (715)
+......+|++.+..|+++... ...|+.+. .+ +....+... ... ...++++.+.++.|++. +
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~---~~~I~~~~~~g~~~~~~~~~~~~~--~~~-------~p~glavD~~~~~lY~~-d 177 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVISR--DIQ-------APDGLAVDWIHSNIYWT-D 177 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETT---TTEEEEEEC------CCCEEEECS--SCS-------CEEEEEEETTTTEEEEE-E
T ss_pred cCcceEEeeeeccCceEEEecC---CCeEEEEEcccCCCCCcceEEEeC--CCC-------CcccEEEEecCCceEEE-E
Confidence 3567888999988888776432 23577666 33 122333321 110 11577888877777664 2
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCC
Q 005093 117 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 196 (715)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~ 196 (715)
. ....|.++++++...+.+. ...-.....++..|.+.
T Consensus 178 ~------------------------------------------~~~~I~~~~~~g~~~~~l~-~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 178 S------------------------------------------VLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHG 214 (400)
T ss_dssp T------------------------------------------TTTEEEEECTTTCSEEEEE-ECSSCCEEEEEEETTTT
T ss_pred C------------------------------------------CCCeEEEEeCCCCceEEEE-eCCCCCcceEEEecccC
Confidence 1 1267899999887766652 11222356778899877
Q ss_pred CCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-CCCccccceeEcCCCCeE
Q 005093 197 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFL 275 (715)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l 275 (715)
. |+++.+. ....|+++++ ++...+.+. ........++++|++++|
T Consensus 215 ~----ly~td~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 215 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp E----EEEEECS-------------SSCCEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred e----EEEEeCC-------------CCCEEEEEeC-----------------CCCccEEEEECCCCceEEEEEEeCCCEE
Confidence 6 7776431 1247999997 555554443 333457789999999999
Q ss_pred EEEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
+|+.... ..|+++++++...
T Consensus 261 Y~aD~~~----------~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 261 YWVDSKL----------HSISSIDVNGGNR 280 (400)
T ss_dssp EEEETTT----------TEEEEEETTSCCC
T ss_pred EEEECCC----------CEEEEEeCCCCcc
Confidence 9987543 4699999876443
No 455
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.03 E-value=0.00025 Score=68.59 Aligned_cols=206 Identities=9% Similarity=-0.013 Sum_probs=116.5
Q ss_pred eEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 005093 46 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 124 (715)
Q Consensus 46 ~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 124 (715)
....++||| + +|+++...+...+..++ .+|+..+.+.++... ....++++|++|+.....
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----------fgeGi~~~g~~lyv~t~~------- 84 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----------FGEGLTLLNEKLYQVVWL------- 84 (266)
T ss_dssp EEEEECSTT-E-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----------CEEEEEEETTEEEEEETT-------
T ss_pred ccEEEeCCC-e-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----------ceEEEEEeCCEEEEEEec-------
Confidence 456889996 4 56655322566888899 778877766654433 233455567777765331
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEE
Q 005093 125 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 204 (715)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~ 204 (715)
...++++|.++.++..- .+.. .......++||++ ++.
T Consensus 85 ------------------------------------~~~v~viD~~t~~v~~~--i~~g-~~~g~glt~Dg~~----l~v 121 (266)
T 2iwa_A 85 ------------------------------------KNIGFIYDRRTLSNIKN--FTHQ-MKDGWGLATDGKI----LYG 121 (266)
T ss_dssp ------------------------------------CSEEEEEETTTTEEEEE--EECC-SSSCCEEEECSSS----EEE
T ss_pred ------------------------------------CCEEEEEECCCCcEEEE--EECC-CCCeEEEEECCCE----EEE
Confidence 27799999998876543 1111 1234568899998 665
Q ss_pred EeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCCC--c---cccceeEcCCCCeEEEE
Q 005093 205 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESI--S---SAFFPRFSPDGKFLVFL 278 (715)
Q Consensus 205 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~--~---~~~~~~~spdg~~l~~~ 278 (715)
+ + ....|+.+|. ++.+. ..+.-.. . ......|. || +| |+
T Consensus 122 s-~--------------gs~~l~viD~-----------------~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~l-yv 166 (266)
T 2iwa_A 122 S-D--------------GTSILYEIDP-----------------HTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EV-WA 166 (266)
T ss_dssp E-C--------------SSSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TT-EE-EE
T ss_pred E-C--------------CCCeEEEEEC-----------------CCCcEEEEEEECCCCcccccceeEEEE-CC-EE-EE
Confidence 4 2 1237999996 55443 3333211 1 23455677 66 45 44
Q ss_pred ecCCCCCCCCccccceeEeeecCCCCCC-CcccceeeeeeceecC-CCCCccccccCCCCCCccccCCCEEEEEeeeCCe
Q 005093 279 SAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPVVQCA-EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 356 (715)
Q Consensus 279 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~ 356 (715)
.... ..+|.++|..+++.. .+... .+.... ... .+ -......++|+++++++|++.. ..
T Consensus 167 n~~~---------~~~V~vID~~tg~V~~~I~~~-----g~~~~~~~~~-~~--~~~v~nGIa~~~~~~~lfVTgk--~~ 227 (266)
T 2iwa_A 167 NIWQ---------TDCIARISAKDGTLLGWILLP-----NLRKKLIDEG-FR--DIDVLNGIAWDQENKRIFVTGK--LW 227 (266)
T ss_dssp EETT---------SSEEEEEETTTCCEEEEEECH-----HHHHHHHHTT-CT--TCCCEEEEEEETTTTEEEEEET--TC
T ss_pred ecCC---------CCeEEEEECCCCcEEEEEECC-----Cccccccccc-cc--ccCceEEEEEcCCCCEEEEECC--CC
Confidence 4332 247999999887652 11100 000000 000 00 0012346789999998877653 44
Q ss_pred eEEEEEECCCC
Q 005093 357 QVIISVNVSSG 367 (715)
Q Consensus 357 ~~l~~~d~~tg 367 (715)
..|+.+++.+.
T Consensus 228 ~~v~~i~l~~~ 238 (266)
T 2iwa_A 228 PKLFEIKLHLV 238 (266)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEecc
Confidence 68888887543
No 456
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.00 E-value=0.00019 Score=76.74 Aligned_cols=106 Identities=16% Similarity=0.106 Sum_probs=57.6
Q ss_pred eEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCE
Q 005093 267 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 346 (715)
Q Consensus 267 ~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~ 346 (715)
.++++|+.|+..+.+. .|.++|+.+++....... +...+..+.|+++++.
T Consensus 275 ~~~~~~~~l~~~~~d~-----------~i~vwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~~~~~ 324 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDN-----------TLIVWDVAQMKCLYILSG-------------------HTDRIYSTIYDHERKR 324 (464)
T ss_dssp EEEEETTEEEEEETTS-----------CEEEEETTTTEEEEEECC-------------------CSSCEEEEEEETTTTE
T ss_pred EEcCCCCEEEEEeCCC-----------eEEEEECCCCcEEEEecC-------------------CCCCEEEEEEcCCCCE
Confidence 4578899887776553 488888876443111000 1113456779999986
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 347 MLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 347 l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
++ +...++ .|..+|+.+++......... .....++.+++.++....+ ..|.+.++.
T Consensus 325 l~-sg~~dg--~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~l~s~s~d----g~v~vwd~~ 380 (464)
T 3v7d_B 325 CI-SASMDT--TIRIWDLENGELMYTLQGHT-ALVGLLRLSDKFLVSAAAD----GSIRGWDAN 380 (464)
T ss_dssp EE-EEETTS--CEEEEETTTTEEEEEECCCS-SCEEEEEECSSEEEEEETT----SEEEEEETT
T ss_pred EE-EEeCCC--cEEEEECCCCcEEEEEeCCC-CcEEEEEEcCCEEEEEeCC----CcEEEEECC
Confidence 54 444444 46667888887665443322 1223344445544433321 235555554
No 457
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.97 E-value=0.00038 Score=73.00 Aligned_cols=158 Identities=11% Similarity=0.184 Sum_probs=90.7
Q ss_pred EeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEE-ecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 005093 48 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 125 (715)
Q Consensus 48 ~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 125 (715)
++|+|+|+.|+..... +...++.+. .++...+.. ...... ......++++|++.+|++ +..
T Consensus 176 ia~~~~g~~l~~~d~~--~~~~I~~~d~~~~~~~~~~g~~~~~~------~~~p~~iav~p~~g~lyv-~d~-------- 238 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWE--GTHTVYVYMKASGWAPTRIGQLGSTF------SGKIGAVALDETEEWLYF-VDS-------- 238 (409)
T ss_dssp CEECTTSSEEEEEBSS--TTCEEEEEEGGGTTCEEEEEECCTTS------CSCCCBCEECTTSSEEEE-ECT--------
T ss_pred eeEecCCCcEEEEecC--CCceEEEEEcCCCceeEEeeeccchh------cCCcEEEEEeCCCCeEEE-EEC--------
Confidence 8999999987655432 222677777 444332222 111101 012368999997777877 221
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecC--CCCCCcc--c-eEEEecCCCCCcc
Q 005093 126 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSV--G-QVVWAPLNEGLHQ 200 (715)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~--~~~~~~~--~-~~~~spdg~~~~~ 200 (715)
...|+++|++++....+.+ ....... . .++|+|++..
T Consensus 239 -----------------------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~--- 280 (409)
T 3hrp_A 239 -----------------------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN--- 280 (409)
T ss_dssp -----------------------------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE---
T ss_pred -----------------------------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE---
Confidence 1569999998887655410 1111111 2 8899997765
Q ss_pred EEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCCC---------------Cccccc
Q 005093 201 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES---------------ISSAFF 265 (715)
Q Consensus 201 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~---------------~~~~~~ 265 (715)
|+++. . ....|++++. .+ ....+... ......
T Consensus 281 -lyv~d-~-------------~~~~I~~~~~-----------------~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 281 -FYMSD-Q-------------NLSSVYKITP-----------------DG-ECEWFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp -EEEEE-T-------------TTTEEEEECT-----------------TC-CEEEEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred -EEEEe-C-------------CCCEEEEEec-----------------CC-CEEEEEeCCCCCCcCCCcccccEeCCCeE
Confidence 66553 1 2346888885 22 22222211 123567
Q ss_pred eeEcCCCCeEEEEec-CCCCCCCCccccceeEeeecCCCC
Q 005093 266 PRFSPDGKFLVFLSA-KSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 266 ~~~spdg~~l~~~~~-~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
.+++|||+ |+++.. . ...|+++++.++.
T Consensus 328 ia~d~dG~-lyvad~~~----------~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 328 MTVDEDGN-FYIVDGFK----------GYCLRKLDILDGY 356 (409)
T ss_dssp EEECTTCC-EEEEETTT----------TCEEEEEETTTTE
T ss_pred EEEeCCCC-EEEEeCCC----------CCEEEEEECCCCE
Confidence 88999998 666654 3 2468888866554
No 458
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.95 E-value=0.0013 Score=66.20 Aligned_cols=180 Identities=11% Similarity=0.003 Sum_probs=109.9
Q ss_pred ceEEEEEccCCce--EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 162 PSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 162 ~~l~~~~~~~g~~--~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
..|++++++++.. ..+ ...-.....+++.+.+.. |+++.. ....|.++++
T Consensus 57 ~~I~r~~~~g~~~~~~~~--~~~l~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~-------- 108 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVV--VSGLLSPDGLACDWLGEK----LYWTDS--------------ETNRIEVSNL-------- 108 (318)
T ss_dssp TEEEEEETTSSSCCCEEE--EECCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET--------
T ss_pred CcEEEEEccCCCceEEEE--cCCCCCccEEEEEcCCCe----EEEEEC--------------CCCEEEEEEC--------
Confidence 6789999987742 222 111123456788887776 776642 2247999997
Q ss_pred hhhhhccCCCCCCceecC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 240 ELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 240 ~~~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
++...+.+. .........++.|++..|+|+.... ...|+++++++...+.+...
T Consensus 109 ---------dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~------- 163 (318)
T 3sov_A 109 ---------DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------VPKIERAGMDGSSRFIIINS------- 163 (318)
T ss_dssp ---------TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS---------SCEEEEEETTSCSCEEEECS-------
T ss_pred ---------CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC---------CCEEEEEEcCCCCeEEEEEC-------
Confidence 555544443 3334567788999888898876432 24699999876443222110
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCC
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 398 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~ 398 (715)
+.. .+..+++++++..||++-. ....|+++|++++..+.+..... ..-..++.+++.+|.+..
T Consensus 164 -----~l~-------~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~-~~P~glav~~~~lywtd~-- 226 (318)
T 3sov_A 164 -----EIY-------WPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSL-PHPFALTLFEDILYWTDW-- 226 (318)
T ss_dssp -----SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSCC-SCEEEEEEETTEEEEEET--
T ss_pred -----CCC-------CccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecCCC-CCceEEEEeCCEEEEEec--
Confidence 000 2346778888888888643 45689999998766666654222 122345567778877642
Q ss_pred CCCCeEEEEeeccc
Q 005093 399 VDVPQVKYGYFVDK 412 (715)
Q Consensus 399 ~~p~~l~~~~~~~~ 412 (715)
....|++++..++
T Consensus 227 -~~~~V~~~~~~~G 239 (318)
T 3sov_A 227 -STHSILACNKYTG 239 (318)
T ss_dssp -TTTEEEEEETTTC
T ss_pred -CCCeEEEEECCCC
Confidence 3446888876444
No 459
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.94 E-value=0.00055 Score=68.45 Aligned_cols=41 Identities=10% Similarity=-0.081 Sum_probs=27.2
Q ss_pred ceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCCcc-ccceeEcCCCCeEEEEecC
Q 005093 224 CALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISS-AFFPRFSPDGKFLVFLSAK 281 (715)
Q Consensus 224 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~-~~~~~~spdg~~l~~~~~~ 281 (715)
..|.+.|+ .+++ ...|..+... ....+|||||++|+-.+.+
T Consensus 305 gTIkIWDl-----------------~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D 347 (356)
T 2w18_A 305 GTIAIWDL-----------------LLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD 347 (356)
T ss_dssp SCEEEEET-----------------TTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT
T ss_pred CcEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC
Confidence 36888887 5555 4456555443 3458999999999866654
No 460
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.93 E-value=0.0013 Score=64.69 Aligned_cols=180 Identities=12% Similarity=0.111 Sum_probs=96.6
Q ss_pred CeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCC
Q 005093 68 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 146 (715)
Q Consensus 68 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (715)
..++.++ ++|+..+.+...... ....+.++|||+.|+ . .
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~--------~~~~~~~~pdG~ilv-s-~------------------------------ 54 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGW--------ECNSVAATKAGEILF-S-Y------------------------------ 54 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTC--------CCCEEEECTTSCEEE-E-C------------------------------
T ss_pred CEEEEEECCCCeEEEEeCCCccC--------CCcCeEECCCCCEEE-e-C------------------------------
Confidence 4666666 477776665543210 126889999998555 2 1
Q ss_pred cccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceE
Q 005093 147 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 226 (715)
Q Consensus 147 ~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i 226 (715)
...|+.+|+++..+..+. .........+.++|||+. ++-... .+..|
T Consensus 55 --------------~~~V~~~d~~G~~~W~~~-~~~~~~~~~~~~~~dG~~----lv~~~~--------------~~~~v 101 (276)
T 3no2_A 55 --------------SKGAKMITRDGRELWNIA-APAGCEMQTARILPDGNA----LVAWCG--------------HPSTI 101 (276)
T ss_dssp --------------BSEEEEECTTSCEEEEEE-CCTTCEEEEEEECTTSCE----EEEEES--------------TTEEE
T ss_pred --------------CCCEEEECCCCCEEEEEc-CCCCccccccEECCCCCE----EEEecC--------------CCCEE
Confidence 145888888444445552 222234567789999985 444331 02245
Q ss_pred EEEecccccchhhhhhhhccCCCCCCceecC------CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeec
Q 005093 227 YAVRVSLYKSEASELELKESSSEDLPVVNLT------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 300 (715)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt------~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~ 300 (715)
+.+|. ++.....+. ..........+++||+.|+..... ..|+.+|.
T Consensus 102 ~~vd~-----------------~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----------~~v~~~d~ 153 (276)
T 3no2_A 102 LEVNM-----------------KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----------SEVREIAP 153 (276)
T ss_dssp EEECT-----------------TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----------TEEEEECT
T ss_pred EEEeC-----------------CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-----------CEEEEECC
Confidence 55553 222222211 111123455788999977543322 35888887
Q ss_pred CCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 301 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 301 ~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
. ++...- .... ..+......++|+.+ +..... .+|+.+|+++|+...-
T Consensus 154 ~-G~~~w~------------~~~~--------~~~~~~~~~~~g~~~-v~~~~~--~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 154 N-GQLLNS------------VKLS--------GTPFSSAFLDNGDCL-VACGDA--HCFVQLNLESNRIVRR 201 (276)
T ss_dssp T-SCEEEE------------EECS--------SCCCEEEECTTSCEE-EECBTT--SEEEEECTTTCCEEEE
T ss_pred C-CCEEEE------------EECC--------CCccceeEcCCCCEE-EEeCCC--CeEEEEeCcCCcEEEE
Confidence 6 443110 0000 012233456788744 443332 4699999998887544
No 461
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.92 E-value=5.1e-05 Score=80.68 Aligned_cols=113 Identities=17% Similarity=0.109 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCCCCCc--cchHHHHHHHhCCcEEEEEcCCCCCCCchhhhh----c----CCCCCCccchhhHHHHH
Q 005093 479 SCDPLIVVLHGGPHSVSLS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ----S----LPGKVGSQDVNDVLTAI 548 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~--~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~----~----~~~~~~~~~~~d~~~~i 548 (715)
+..|++|++-| -+..... .-..+.+...+.|-.++.+.+|- ||.+..- . +..-...+.+.|++.++
T Consensus 41 ~~gPIfl~~gG-Eg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi 116 (472)
T 4ebb_A 41 GEGPIFFYTGN-EGDVWAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAELL 116 (472)
T ss_dssp TTCCEEEEECC-SSCHHHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHH
T ss_pred CCCcEEEEECC-CccccccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHHHH
Confidence 34788888754 2221100 01112344567899999999997 6665421 0 11112234478888888
Q ss_pred HHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 005093 549 DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 595 (715)
Q Consensus 549 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 595 (715)
.++.........+++++|.|+||.+|+++-.++|+++.++++.|+++
T Consensus 117 ~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 117 RALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 88887755566799999999999999999999999999988877654
No 462
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.92 E-value=9.8e-05 Score=83.07 Aligned_cols=146 Identities=14% Similarity=0.120 Sum_probs=87.4
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|+++++++...+.+. ...-.....+++.|++.. |+++.+. ....|+++++
T Consensus 475 ~~I~v~d~dg~~~~~l~-~~~~~~P~giavDp~~g~----ly~td~~-------------~~~~I~~~~~---------- 526 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLF-REQGSKPRAIVVDPVHGF----MYWTDWG-------------TPAKIKKGGL---------- 526 (699)
T ss_dssp SCEEEEBSSSCCEEEEC-CCSSCCCCCEECCSSSSC----CEECCCS-------------SSCCEEBCCS----------
T ss_pred CeEEEEecCCCceEEEE-eCCCCCcceEEEccCCCc----EEEcccC-------------CCCeEEEEeC----------
Confidence 66899999887766662 112234567889998887 7765421 1236888886
Q ss_pred hhhccCCCCCCceecC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
.+...+.+. ........++|+|++++|+|+.... ..|+++++.+...+.+....
T Consensus 527 -------dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~----------~~I~~~d~dG~~~~~~~~~~-------- 581 (699)
T 1n7d_A 527 -------NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL----------HSISSIDVNGGNRKTILEDE-------- 581 (699)
T ss_dssp -------SSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT----------TEEEEECSSSSCCEEECCCS--------
T ss_pred -------CCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC----------CeEEEEccCCCceEEEEecC--------
Confidence 444443333 3334567799999999999887543 46999998764332221100
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 373 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 373 (715)
..++ .+..+.+ +++.||++. ....+|+++|..+|+.....
T Consensus 582 ----~~~~-----~P~glav--d~~~lywtd--~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 582 ----KRLA-----HPFSLAV--FEDKVFWTD--IINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp ----SSCS-----SCCCCEE--ETTEEEEEC--STTTCEEEEETTTEEEEECC
T ss_pred ----CcCC-----CceEeEE--ECCEEEEEe--CCCCeEEEEEccCCCceEEe
Confidence 0000 1223333 445677655 23457888888777766544
No 463
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.88 E-value=0.00095 Score=67.44 Aligned_cols=194 Identities=11% Similarity=-0.021 Sum_probs=99.6
Q ss_pred eEEEEEccCCceEeecCCCCC---CccceEEEec-CCCCCccEEEEEeecCccceeeee---eeecCCceEEEEeccccc
Q 005093 163 SLFVININSGEVQAVKGIPKS---LSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIK---YCYNRPCALYAVRVSLYK 235 (715)
Q Consensus 163 ~l~~~~~~~g~~~~l~~~~~~---~~~~~~~~sp-dg~~~~~~i~~~~~~~~~~~~g~~---~~~~~~~~i~~~~~~~~~ 235 (715)
.|+++|+++++.+.+...... .....+.+.| ||+ |+++.....-....+. ........|+++|.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-----l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---- 172 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-----VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---- 172 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-----EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET----
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-----EEEECCcccccccccceehcccCCCceEEEEeC----
Confidence 377788777765554211111 1245678899 885 6665421100000000 00012246999995
Q ss_pred chhhhhhhhccCCCCCCceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeee
Q 005093 236 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 315 (715)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~ 315 (715)
.+++.+.+.........++|+|||+.|+++... ...|+++++.+..... ....
T Consensus 173 -------------~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~----------~~~I~~~~~~~~~~~~----~~~~ 225 (322)
T 2fp8_A 173 -------------STKETTLLLKELHVPGGAEVSADSSFVLVAEFL----------SHQIVKYWLEGPKKGT----AEVL 225 (322)
T ss_dssp -------------TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG----------GTEEEEEESSSTTTTC----EEEE
T ss_pred -------------CCCEEEEeccCCccCcceEECCCCCEEEEEeCC----------CCeEEEEECCCCcCCc----cceE
Confidence 556555443322345668999999988776543 2468999987532111 0000
Q ss_pred eeceecCCCCCccccccCCCCCCccccCCCEEEEEeee--------CCeeEEEEEECCCCcEEEecCCCCC-ce-eEEEe
Q 005093 316 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--------GSSQVIISVNVSSGELLRITPAESN-FS-WSLLT 385 (715)
Q Consensus 316 ~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~--------~~~~~l~~~d~~tg~~~~l~~~~~~-~~-~~~~s 385 (715)
.. .+ ++..++..++|+ |+++... .....|+++|.++.....+....+. +. ...+.
T Consensus 226 ~~---------~~-----gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~ 290 (322)
T 2fp8_A 226 VK---------IP-----NPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQ 290 (322)
T ss_dssp EE---------CS-----SEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEE
T ss_pred Ee---------CC-----CCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEE
Confidence 00 00 023456778887 6665543 2246799999864444455433321 11 12233
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 386 LDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 386 ~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
..++.|++... ....|.++++.
T Consensus 291 ~~~g~L~v~~~---~~~~i~~~~~~ 312 (322)
T 2fp8_A 291 EHDGLLYIGTL---FHGSVGILVYD 312 (322)
T ss_dssp EETTEEEEECS---SCSEEEEEEC-
T ss_pred EeCCEEEEeec---CCCceEEEecc
Confidence 35667776542 33457777764
No 464
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.86 E-value=0.0072 Score=59.50 Aligned_cols=175 Identities=6% Similarity=-0.040 Sum_probs=93.1
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++.++.....+. .........++++|||+ ++++.. ....|+++|.
T Consensus 100 ~~i~~~d~~g~~~~~~~-~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 149 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFG-ATILQHPRGVTVDNKGR-----IIVVEC--------------KVMRVIIFDQ---------- 149 (286)
T ss_dssp CEEEEECTTSCEEEEEC-TTTCSCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred CEEEEECCCCcEEEEec-CccCCCceEEEEeCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 56888986555444452 22223456788999985 555431 2236888884
Q ss_pred hhhccCCCCCCceecC--CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 242 ELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt--~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
.+.....+. ........++++|||+ |+++... ...|++++..+.....+..
T Consensus 150 -------~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~g~~~~~~~~--------- 202 (286)
T 1q7f_A 150 -------NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR----------AHCVKVFNYEGQYLRQIGG--------- 202 (286)
T ss_dssp -------TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG----------GTEEEEEETTCCEEEEESC---------
T ss_pred -------CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC----------CCEEEEEcCCCCEEEEEcc---------
Confidence 433333332 1223467789999997 5444432 2358888865422111110
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCC--ceeEEEeecCCEEEEEEeC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESN--FSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~--~~~~~~s~~~~~l~~~~~~ 397 (715)
.+.+ ..+..++++++|+ ++++.... ...|..+|.++.....+...... .....++++| .++++ +.
T Consensus 203 ----~g~~-----~~p~~i~~d~~G~-l~v~~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~ 269 (286)
T 1q7f_A 203 ----EGIT-----NYPIGVGINSNGE-ILIADNHN-NFNLTIFTQDGQLISALESKVKHAQCFDVALMDDG-SVVLA-SK 269 (286)
T ss_dssp ----TTTS-----CSEEEEEECTTCC-EEEEECSS-SCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTT-EEEEE-ET
T ss_pred ----CCcc-----CCCcEEEECCCCC-EEEEeCCC-CEEEEEECCCCCEEEEEcccCCCCcceeEEECCCC-cEEEE-CC
Confidence 0000 0234567888986 65554322 23788888765555555433221 2234566665 56555 32
Q ss_pred CCCCCeEEEEee
Q 005093 398 PVDVPQVKYGYF 409 (715)
Q Consensus 398 ~~~p~~l~~~~~ 409 (715)
+ ..|.+.+.
T Consensus 270 -~--~~v~v~~~ 278 (286)
T 1q7f_A 270 -D--YRLYIYRY 278 (286)
T ss_dssp -T--TEEEEEEC
T ss_pred -C--CeEEEEEc
Confidence 2 45666554
No 465
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.82 E-value=0.0032 Score=71.23 Aligned_cols=182 Identities=8% Similarity=-0.060 Sum_probs=108.9
Q ss_pred ceEEEEEccCC----ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~g----~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..|+++++++. ..+.+. ...-.....+++.+.++. |+++-. ....|+++++
T Consensus 446 ~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~----LY~tD~--------------~~~~I~v~~l------ 500 (791)
T 3m0c_C 446 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 500 (791)
T ss_dssp TEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET------
T ss_pred eeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCc----EEEEec--------------CCCeEEEEeC------
Confidence 56888888763 333331 112234557888888887 777642 2347999997
Q ss_pred hhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeee
Q 005093 238 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 316 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~ 316 (715)
++...+.|.. .......+++.|.+.+|+|+.... ...|+++++++...+.+....
T Consensus 501 -----------dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---------~~~I~~~~~dG~~~~~lv~~~---- 556 (791)
T 3m0c_C 501 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTEN---- 556 (791)
T ss_dssp -----------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCCEEEEECSS----
T ss_pred -----------CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---------CCeEEEEecCCCceEEEEeCC----
Confidence 5555555543 333467889999988899887432 146999998765432221100
Q ss_pred eceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeEEEeecCCEEEEEE
Q 005093 317 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~~~~~l~~~~ 395 (715)
.. .+..++..+.+..||++- .....|+++++++...+.+..... ......++..+++||++-
T Consensus 557 --------l~-------~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 557 --------IQ-------WPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp --------CS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred --------CC-------CceEEEEecCCCeEEEEe--CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 00 123455666677788863 345689999998777776654422 112245666777887765
Q ss_pred eCCCCCCeEEEEeeccc
Q 005093 396 SSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 396 ~~~~~p~~l~~~~~~~~ 412 (715)
. ....|++++..++
T Consensus 620 ~---~~~~I~~~dk~tG 633 (791)
T 3m0c_C 620 I---INEAIFSANRLTG 633 (791)
T ss_dssp T---TTTEEEEEETTTC
T ss_pred C---CCCEEEEEeCCCC
Confidence 3 3355777764444
No 466
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.81 E-value=0.0024 Score=67.75 Aligned_cols=69 Identities=9% Similarity=-0.032 Sum_probs=37.4
Q ss_pred CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec------CCCCCceeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 337 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT------PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 337 ~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~------~~~~~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
.+.| +++ ++++...++ .|..+|+.+++..... ...+.+....|++++..++....+...+..|++.++.
T Consensus 367 ~~~~--~~~-~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 367 CLQF--NKN-FVITSSDDG--TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEE--CSS-EEEEEETTS--EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEE--CCC-EEEEEeCCC--eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 3445 455 445555444 5666688888765433 1222233345666654444444444446778887765
No 467
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.78 E-value=0.0015 Score=73.98 Aligned_cols=163 Identities=9% Similarity=0.084 Sum_probs=103.0
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCC-----ccEEEEecCccccccccCCCcccceeecCCCCeEEEEeec
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 117 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~ 117 (715)
.....+++++.+.+|+++... ...|+.+...| ....++.. .. ....++++.+.+++|++. +.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~---~~~I~~~~l~g~~~~~~~~~vi~~--~l-------~~P~GLAvD~~~~~LY~t-D~ 490 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVISR--DI-------QAPDGLAVDWIHSNIYWT-DS 490 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TTEEEEEEC--------CEEEECS--SC-------SCCCEEEEETTTTEEEEE-ET
T ss_pred CceEEEeecccCCeeEEeecc---ceeEEEEeccCCCCCcceeEEEec--CC-------CCcceeeeeecCCcEEEE-ec
Confidence 556778888888887666432 33577666322 22333321 11 112688888888888764 21
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCC
Q 005093 118 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
....|+++++++...+.+. ...-.....++..|.+..
T Consensus 491 ------------------------------------------~~~~I~v~~ldG~~~~~l~-~~~l~~P~gIaVDp~~g~ 527 (791)
T 3m0c_C 491 ------------------------------------------VLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGF 527 (791)
T ss_dssp ------------------------------------------TTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTE
T ss_pred ------------------------------------------CCCeEEEEeCCCCeEEEEE-eCCCCCcceEEEecCCCC
Confidence 2367999999988776662 112224567888998776
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLV 276 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~ 276 (715)
|+++-+. ....|+++++ ++...+.+.. .......+++++++++|+
T Consensus 528 ----LYwtD~g-------------~~~~I~~~~~-----------------dG~~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 528 ----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp ----EEEEECS-------------SSCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred ----EEEecCC-------------CCCeEEEEec-----------------CCCceEEEEeCCCCCceEEEEecCCCeEE
Confidence 7776531 1247999997 5555544443 334577789999999999
Q ss_pred EEecCCCCCCCCccccceeEeeecCCCCC
Q 005093 277 FLSAKSSVDSGAHSATDSLHRIDWPTNGN 305 (715)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 305 (715)
|+.... ..|+++++.+...
T Consensus 574 waD~~~----------~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 574 WVDSKL----------HSISSIDVNGGNR 592 (791)
T ss_dssp EEETTT----------TEEEEEETTSCSC
T ss_pred EEeCCC----------CcEEEEecCCCce
Confidence 986542 4699999877544
No 468
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.78 E-value=0.00019 Score=80.75 Aligned_cols=182 Identities=8% Similarity=-0.055 Sum_probs=104.8
Q ss_pred ceEEEEEccC----CceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININS----GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~----g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..|+++++++ .....+. ...-.....+++.+.+.. |+++.. ....|+++++
T Consensus 428 ~~I~~~~~~g~~~~~~~~~~i-~~~~~~P~glavD~~~g~----LY~tD~--------------~~~~I~v~d~------ 482 (699)
T 1n7d_A 428 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 482 (699)
T ss_dssp TSBEEEESCCCCC-CCCCCBC-CSCC--CCCEECCCSSSB----CEECCT--------------TTSCEEEEBS------
T ss_pred CeEEEEecCCCCCCcceEEEE-eCCCCCcceEEEEeeCCc----EEEEec--------------cCCeEEEEec------
Confidence 5688888875 2322221 111123445677766666 665431 2246889986
Q ss_pred hhhhhhhccCCCCCCceecCCC-CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeee
Q 005093 238 ASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 316 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~lt~~-~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~ 316 (715)
.+...+.+... ......++++|++.+|+|+.... ...|+++++++...+.+...
T Consensus 483 -----------dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~l~~~----- 537 (699)
T 1n7d_A 483 -----------KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 537 (699)
T ss_dssp -----------SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS---------SCCEEBCCSSSCCCCEESCS-----
T ss_pred -----------CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC---------CCeEEEEeCCCCCeeEEEeC-----
Confidence 55555555433 33467789999988888776432 14588888776443222110
Q ss_pred eceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeEEEeecCCEEEEEE
Q 005093 317 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 395 (715)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~~~~~l~~~~ 395 (715)
.. ..+..++|++++..||++-. ...+|+++++++...+.+..... ......++.+++.||++.
T Consensus 538 -------~l-------~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd 601 (699)
T 1n7d_A 538 -------NI-------QWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 601 (699)
T ss_dssp -------SC-------SSCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEEC
T ss_pred -------CC-------CCccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEe
Confidence 00 02457789988888888653 45689999997666666554221 111224555677777665
Q ss_pred eCCCCCCeEEEEeeccc
Q 005093 396 SSPVDVPQVKYGYFVDK 412 (715)
Q Consensus 396 ~~~~~p~~l~~~~~~~~ 412 (715)
. ....|.+++..++
T Consensus 602 ~---~~~~V~~~d~~~G 615 (699)
T 1n7d_A 602 I---INEAIFSANRLTG 615 (699)
T ss_dssp S---TTTCEEEEETTTE
T ss_pred C---CCCeEEEEEccCC
Confidence 2 3346888775443
No 469
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.77 E-value=0.0011 Score=63.30 Aligned_cols=177 Identities=14% Similarity=0.189 Sum_probs=100.5
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.++|+++|++..-...+. .....-.+++|++ |+...|. ...++++|.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~----ly~ltw~--------------~~~v~v~D~---------- 114 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDK----IVGLTWK--------------NGLGFVWNI---------- 114 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEESS--------------SSEEEEEET----------
T ss_pred ceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCE----EEEEEee--------------CCEEEEEEC----------
Confidence 689999999998765411222 2222335667887 7666542 247999997
Q ss_pred hhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
++.+. .++.-+ . ..-..++||++|+ .++.+ ..|+++|..+.+... .+++-.
T Consensus 115 -------~t~~~~~ti~~~-~--eG~glt~dg~~L~-~SdGs----------~~i~~iDp~T~~v~~-------~I~V~~ 166 (262)
T 3nol_A 115 -------RNLRQVRSFNYD-G--EGWGLTHNDQYLI-MSDGT----------PVLRFLDPESLTPVR-------TITVTA 166 (262)
T ss_dssp -------TTCCEEEEEECS-S--CCCCEEECSSCEE-ECCSS----------SEEEEECTTTCSEEE-------EEECEE
T ss_pred -------ccCcEEEEEECC-C--CceEEecCCCEEE-EECCC----------CeEEEEcCCCCeEEE-------EEEecc
Confidence 55443 333322 1 2234567898775 44332 359999987754310 011100
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-------------CceeEEEeec
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-------------NFSWSLLTLD 387 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-------------~~~~~~~s~~ 387 (715)
....+ ..+..+.|. ||+ ||... +. ...|.++|+++|++.......+ ......++++
T Consensus 167 --~g~~~-----~~lNELe~~-~G~-lyan~-w~-~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 167 --HGEEL-----PELNELEWV-DGE-IFANV-WQ-TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp --TTEEC-----CCEEEEEEE-TTE-EEEEE-TT-SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred --CCccc-----cccceeEEE-CCE-EEEEE-cc-CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 00000 011234565 664 66443 32 3589999999999876543321 1233577888
Q ss_pred CCEEEEEEeCCCCCCeEEEEeec
Q 005093 388 GDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 388 ~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
+++|+++.-.. |.+|.+.+.
T Consensus 236 ~~~lfVTGK~W---p~~~ev~~~ 255 (262)
T 3nol_A 236 HHRLFVTGKLW---PKVFEITLT 255 (262)
T ss_dssp TTEEEEEETTC---SEEEEEEEE
T ss_pred CCEEEEECCCC---CceEEEEEe
Confidence 88888877555 557766654
No 470
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.77 E-value=0.0025 Score=62.11 Aligned_cols=174 Identities=5% Similarity=-0.053 Sum_probs=92.2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++.+++....+. .........++++|||+ |++... ...|+++|.
T Consensus 46 ~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~---------------~~~i~~~d~---------- 94 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLP-FNGLYQPQGLAVDGAGT-----VYVTDF---------------NNRVVTLAA---------- 94 (270)
T ss_dssp CEEEEECC-----EECC-CCSCCSCCCEEECTTCC-----EEEEET---------------TTEEEEECT----------
T ss_pred CcEEEecCCCcccceEe-eCCcCCcceeEECCCCC-----EEEEcC---------------CCEEEEEeC----------
Confidence 56888888776655442 12223456788999886 555431 236889986
Q ss_pred hhhccCCCCCCceecCCC-CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~-~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
.++....+... .......+++|||+ |+++... ...|++++..+........
T Consensus 95 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~---------- 146 (270)
T 1rwi_B 95 -------GSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRG----------NNRVVKLAAGSKTQTVLPF---------- 146 (270)
T ss_dssp -------TCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGG----------GTEEEEECTTCCSCEECCC----------
T ss_pred -------CCceEeeeecCCcCCCcceEECCCCC-EEEEECC----------CCEEEEEECCCceeEeecc----------
Confidence 55544444322 23467788999997 5554432 2358888643322111000
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeEEEeecCCEEEEEEeCCC
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 399 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~~~~~l~~~~~~~~ 399 (715)
..+ ..+..++++++|+ +|++... ...|+++|.+++......... .......++++| .++++...
T Consensus 147 ----~~~-----~~p~~i~~~~~g~-l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~-- 211 (270)
T 1rwi_B 147 ----TGL-----NDPDGVAVDNSGN-VYVTDTD--NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHN-- 211 (270)
T ss_dssp ----CSC-----CSCCCEEECTTCC-EEEEEGG--GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETT--
T ss_pred ----ccC-----CCceeEEEeCCCC-EEEEECC--CCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECC--
Confidence 000 1245677888987 6665432 347899999877765543322 212223444444 55554432
Q ss_pred CCCeEEEEeec
Q 005093 400 DVPQVKYGYFV 410 (715)
Q Consensus 400 ~p~~l~~~~~~ 410 (715)
...|++++..
T Consensus 212 -~~~v~~~~~~ 221 (270)
T 1rwi_B 212 -TNQVVKLLAG 221 (270)
T ss_dssp -TSCEEEECTT
T ss_pred -CCcEEEEcCC
Confidence 2347776654
No 471
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.76 E-value=0.0043 Score=68.56 Aligned_cols=229 Identities=10% Similarity=0.036 Sum_probs=138.0
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSV 93 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 93 (715)
...|..+++++... ..+ .++ ..+.......|++++..|+++.. ....|+.+. +++..+.+......
T Consensus 14 ~~~I~~i~l~~~~~--~~~--~~~-~~~~~~~~l~~d~~~~~lywtD~---~~~~I~r~~~~g~~~~~v~~~g~~----- 80 (628)
T 4a0p_A 14 RADIRRISLETNNN--NVA--IPL-TGVKEASALDFDVTDNRIYWTDI---SLKTISRAFMNGSALEHVVEFGLD----- 80 (628)
T ss_dssp TTEEEEEESSCTTC--EEE--CCC-CSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCS-----
T ss_pred CCcEEEEECCCCCc--ceE--EEc-CCCCceEEEEEECCCCEEEEEEC---CCCeEEEEECCCCCcEEEEeCCCC-----
Confidence 44677777765432 111 122 12345778899999988877643 234677777 55445544432211
Q ss_pred cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCc
Q 005093 94 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 173 (715)
Q Consensus 94 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~ 173 (715)
...+++..+.+++|++. +. ....|.+.++++..
T Consensus 81 ----~P~GlAvD~~~~~LY~t-D~------------------------------------------~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 81 ----YPEGMAVDWLGKNLYWA-DT------------------------------------------GTNRIEVSKLDGQH 113 (628)
T ss_dssp ----CCCEEEEETTTTEEEEE-ET------------------------------------------TTTEEEEEETTSTT
T ss_pred ----CcceEEEEeCCCEEEEE-EC------------------------------------------CCCEEEEEecCCCc
Confidence 12678888888888774 21 12679999998877
Q ss_pred eEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc
Q 005093 174 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 253 (715)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (715)
.+.+. ...-.....++..|.... |+++.+. ....|+++++ ++...
T Consensus 114 ~~~l~-~~~l~~P~~iavdp~~G~----lY~tD~g-------------~~~~I~r~~~-----------------dG~~~ 158 (628)
T 4a0p_A 114 RQVLV-WKDLDSPRALALDPAEGF----MYWTEWG-------------GKPKIDRAAM-----------------DGSER 158 (628)
T ss_dssp CEEEE-CSSCCCEEEEEEETTTTE----EEEEECS-------------SSCEEEEEET-----------------TSCSC
T ss_pred EEEEE-eCCCCCcccEEEccCCCe----EEEeCCC-------------CCCEEEEEeC-----------------CCCce
Confidence 66652 122224567788886665 7776531 1347999997 66666
Q ss_pred eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccC
Q 005093 254 VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 333 (715)
Q Consensus 254 ~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~ 333 (715)
+.+.........+++++++++|+|+.... ..|+++++++...+.+... ..
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~----------~~I~~~d~dG~~~~v~~~~-------------l~------- 208 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDT----------NLIESSNMLGLNREVIADD-------------LP------- 208 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTT----------TEEEEEETTSCSCEEEEEC-------------CS-------
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCC----------CEEEEEcCCCCceEEeecc-------------CC-------
Confidence 66655555677899999999999988653 3699999877443211100 00
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 334 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 334 ~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
.+..++. ++..||++. .....|+++|..+|+.+.+
T Consensus 209 ~P~glav--~~~~ly~tD--~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 209 HPFGLTQ--YQDYIYWTD--WSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp CEEEEEE--ETTEEEEEE--TTTTEEEEEETTTCCSCEE
T ss_pred CceEEEE--ECCEEEEec--CCCCEEEEEECCCCCceEE
Confidence 0112223 334576654 2345788889777764433
No 472
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.71 E-value=0.0013 Score=70.40 Aligned_cols=102 Identities=12% Similarity=0.119 Sum_probs=55.7
Q ss_pred ceEEEEEccC--Cce--EeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININS--GEV--QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~--g~~--~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..+-++|.++ ++. ..+ +.......+.+||||+. ++.+. . ....+.++|+...+.
T Consensus 254 ~~V~VID~~~~~~~~~~~~I---pvg~~PhGv~~sPDGk~----v~V~~-~-------------~s~~VsVid~~~~~~- 311 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYI---PIANNPHGCNMAPDKKH----LCVAG-K-------------LSPTVTVLDVTRFDA- 311 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEE---EEESSCCCEEECTTSSE----EEEEC-T-------------TSSBEEEEEGGGHHH-
T ss_pred CcEEEEeCcccCCceeEEEE---ecCCCceEEEEcCCCCE----EEEeC-C-------------CCCeEEEEECccccc-
Confidence 4589999987 433 233 22335567899999996 55443 2 224799999721000
Q ss_pred hhhhhhhccCCCCC-Cc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCC
Q 005093 238 ASELELKESSSEDL-PV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 238 ~~~~~~~~~~~~~~-~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
..+.+..-. .. ..+ .........+|+||| . +|++..- ..++-++|+++
T Consensus 312 -----~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG-~-aY~t~~l---------dsqV~kwdi~~ 361 (595)
T 1fwx_A 312 -----VFYENADPRSAVVAEP-ELGLGPLHTAFDGRG-N-AYTSLFL---------DSQVVKWNIED 361 (595)
T ss_dssp -----HHHSCCCGGGGEEECC-BCCSCEEEEEECTTS-E-EEEEETT---------TTEEEEEEHHH
T ss_pred -----ccccccCcccceEEEc-CCCCCcceEEECCCC-e-EEEEEec---------CCcEEEEEhhH
Confidence 000000100 11 111 112246778999999 5 5666543 24577788765
No 473
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.0048 Score=59.26 Aligned_cols=210 Identities=13% Similarity=0.110 Sum_probs=117.3
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
...+..+|.|++++|+.+.+. ...++.++..|+..+...+... .-..++++.++|+ ++.+ .+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l~g~--------~D~EGIa~~~~g~-~~vs-~E~---- 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGDLIRTIPLDFV--------KDLETIEYIGDNQ-FVIS-DER---- 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET---TEEEEEEETTCCEEEEEECSSC--------SSEEEEEECSTTE-EEEE-ETT----
T ss_pred cCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCCEEEEEecCCC--------CChHHeEEeCCCE-EEEE-ECC----
Confidence 567889999999988877664 4579999955776666554321 1126888988884 3333 321
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce----Eeec----CCCCCCccceEEEecC
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVK----GIPKSLSVGQVVWAPL 194 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~----~~l~----~~~~~~~~~~~~~spd 194 (715)
...|+++++..... .... ..+.+.....++|+|+
T Consensus 90 --------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~ 131 (255)
T 3qqz_A 90 --------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ 131 (255)
T ss_dssp --------------------------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT
T ss_pred --------------------------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCC
Confidence 24466665543221 1111 1234556789999999
Q ss_pred CCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC-------CCCcccccee
Q 005093 195 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-------ESISSAFFPR 267 (715)
Q Consensus 195 g~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt-------~~~~~~~~~~ 267 (715)
+++ |+.+.... + ..||.++- . ..+...+.+. ..-......+
T Consensus 132 ~~~----L~va~E~~-p------------~~i~~~~g-~--------------~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 132 DHT----FWFFKEKN-P------------IEVYKVNG-L--------------LSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTE----EEEEEESS-S------------EEEEEEES-T--------------TCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCE----EEEEECcC-C------------ceEEEEcc-c--------------ccCCceeeecchhhccccccCCceeEE
Confidence 987 66654221 1 25777661 0 0111111110 0112357788
Q ss_pred EcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC--CcccceeeeeeceecCCCCCccccccCCCCCCccccCCC
Q 005093 268 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF--SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 345 (715)
Q Consensus 268 ~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~--~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~ 345 (715)
+.|....|+.++... ..|..+|.++.-.. .|..+... ....++ ....+++.++|+
T Consensus 180 ~dp~tg~lliLS~~s----------~~L~~~d~~g~~~~~~~L~~g~~~--------l~~~~~-----qpEGia~d~~G~ 236 (255)
T 3qqz_A 180 FNQQKNTLLVLSHES----------RALQEVTLVGEVIGEMSLTKGSRG--------LSHNIK-----QAEGVAMDASGN 236 (255)
T ss_dssp EETTTTEEEEEETTT----------TEEEEECTTCCEEEEEECSTTGGG--------CSSCCC-----SEEEEEECTTCC
T ss_pred EcCCCCeEEEEECCC----------CeEEEEcCCCCEEEEEEcCCccCC--------cccccC-----CCCeeEECCCCC
Confidence 999888898888764 35778886653111 11111100 001111 234677899997
Q ss_pred EEEEEeeeCCeeEEEEEECCC
Q 005093 346 TMLLSSIWGSSQVIISVNVSS 366 (715)
Q Consensus 346 ~l~~~~~~~~~~~l~~~d~~t 366 (715)
+|+++.. +.+|++...+
T Consensus 237 -lyIvsE~---n~~y~f~~~~ 253 (255)
T 3qqz_A 237 -IYIVSEP---NRFYRFTPQS 253 (255)
T ss_dssp -EEEEETT---TEEEEEEC--
T ss_pred -EEEEcCC---ceEEEEEecC
Confidence 7776543 3888887543
No 474
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.65 E-value=0.0064 Score=67.14 Aligned_cols=230 Identities=10% Similarity=0.038 Sum_probs=132.1
Q ss_pred eEEEEEEEeecCCCCccccccCCCccccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCcc--EEEEecCcccccc
Q 005093 15 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL--EKEFHVPQTVHGS 92 (715)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 92 (715)
...|..+++++...+.+. +...........+++++.+|.++.- ....|+.+...|.. +.+... +.
T Consensus 17 ~~~I~~i~~~~~~~~~~~-----~~~~~~~~~~ld~~~~~~~ly~sD~---~~~~I~r~~~~g~~~~~~v~~~--~~--- 83 (619)
T 3s94_A 17 RRDLRLVDATNGKENATI-----VVGGLEDAAAVDFVFSHGLIYWSDV---SEEAIKRTEFNKTESVQNVVVS--GL--- 83 (619)
T ss_dssp SSBEEEECCC--------------CBCCSCEEEEEEETTTTEEEEEET---TTTEEEEEEC-----CEEEECS--SC---
T ss_pred cccEEEEeCCCCcceEEE-----EEcCCCceEEEEEEeCCCEEEEEEC---CCCeEEEEEccCCCceEEEEeC--CC---
Confidence 446778777655321111 1122356778899999988876643 23367776633322 222221 11
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCC
Q 005093 93 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 172 (715)
Q Consensus 93 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 172 (715)
....+++..+.+++|++. +. ....|.+.++++.
T Consensus 84 ----~~P~GlAvD~~~~~ly~~-d~------------------------------------------~~~~I~v~~~dG~ 116 (619)
T 3s94_A 84 ----LSPDGLACDWLGEKLYWT-DS------------------------------------------ETNRIEVSNLDGS 116 (619)
T ss_dssp ----SCEEEEEEETTTTEEEEE-ET------------------------------------------TTTEEEEEETTSC
T ss_pred ----CCcCeEEEEecCCEEEEE-eC------------------------------------------CCCEEEEEECCCC
Confidence 112688899988888764 21 1367999999887
Q ss_pred ceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC
Q 005093 173 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 252 (715)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (715)
..+.+. ...-.....+++.|.+.. |+|+.+. ....|+++++ ++..
T Consensus 117 ~~~~l~-~~~l~~P~~Iavdp~~g~----ly~tD~g-------------~~~~I~r~~~-----------------dG~~ 161 (619)
T 3s94_A 117 LRKVLF-WQELDQPRAIALDPSSGF----MYWTDWG-------------EVPKIERAGM-----------------DGSS 161 (619)
T ss_dssp SCEEEE-CSSCSCCCCEEEETTTTE----EEEEECS-------------SSCEEEEEET-----------------TSCS
T ss_pred CEEEEE-eCCCCCCceEEEecCCCe----EEEeccC-------------CCCEEEEEEC-----------------CCCc
Confidence 766662 122224567889998776 7777532 1247999997 5555
Q ss_pred ceecC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccc
Q 005093 253 VVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 331 (715)
Q Consensus 253 ~~~lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~ 331 (715)
.+.+. .........++++++++|+|+.... ..|+++++++...+.+.... +.
T Consensus 162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~----------~~I~~~~~dG~~~~~~~~~~--------------~~--- 214 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKL----------NFIHKSNLDGTNRQAVVKGS--------------LP--- 214 (619)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEETTT----------CCEEEESSSCCEEC-------------------------
T ss_pred eEEEEeCCCCCCcEEEEEccCCEEEEEeCCC----------CeEEEecCCCCccEEEEeCC--------------CC---
Confidence 54443 3344567789999999999887542 46999998875543332110 00
Q ss_pred cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 005093 332 SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 372 (715)
Q Consensus 332 ~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 372 (715)
.+..+++. +..||++. -....|+++|..+|+....
T Consensus 215 --~P~gi~~~--~~~ly~td--~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 215 --HPFALTLF--EDILYWTD--WSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp ---CCCEEES--SSEEEEEC--TTTCSEEEEESSSCCCCEE
T ss_pred --CceEEEEe--CCEEEEec--CCCCEEEEEECCCCcccEE
Confidence 12334443 33576653 3345799999988765443
No 475
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.63 E-value=0.00027 Score=67.32 Aligned_cols=135 Identities=18% Similarity=0.192 Sum_probs=78.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHH-----------HH------HhCCcEEEEEcCCCCCC
Q 005093 461 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLA-----------FL------SSVGYSLLIVNYRGSLG 523 (715)
Q Consensus 461 ~g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~-----------~l------a~~G~~vi~~d~rG~~~ 523 (715)
.+..+.-|++.... .....|+||+++|||+.+... +..+.+ .+ =.+-..++.+|.+-..|
T Consensus 30 ~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~-~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtG 106 (255)
T 1whs_A 30 AGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVA-YGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVG 106 (255)
T ss_dssp TTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTT-THHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTST
T ss_pred CCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHH-HHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCc
Confidence 45677777775432 345789999999999865322 011100 00 01236799999653333
Q ss_pred CchhhhhcCCCCCC-ccchhhHHHHHHHHHH-cCCCCCceEEEEEeChhHHHHHHHHhhC------CCceeEEEecCCcc
Q 005093 524 FGEEALQSLPGKVG-SQDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLC 595 (715)
Q Consensus 524 ~g~~~~~~~~~~~~-~~~~~d~~~~i~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~~~~ 595 (715)
+............. ....+|+..+++...+ .+.....++.|+|.|+||..+..+|..- .-.++++++.+|++
T Consensus 107 fSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~ 186 (255)
T 1whs_A 107 FSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLI 186 (255)
T ss_dssp TCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECC
T ss_pred cCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCcc
Confidence 43221110000011 1234555566553333 3345567899999999999888776421 23589999999988
Q ss_pred hhh
Q 005093 596 NLA 598 (715)
Q Consensus 596 ~~~ 598 (715)
+..
T Consensus 187 d~~ 189 (255)
T 1whs_A 187 DDY 189 (255)
T ss_dssp BHH
T ss_pred CHH
Confidence 754
No 476
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.62 E-value=0.013 Score=64.70 Aligned_cols=180 Identities=9% Similarity=-0.041 Sum_probs=112.2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++++++..+.+. ..+-.....++..+.+.. |+++.. ....|.++++
T Consensus 59 ~~I~r~~~~g~~~~~v~-~~g~~~P~GlAvD~~~~~----LY~tD~--------------~~~~I~v~~~---------- 109 (628)
T 4a0p_A 59 KTISRAFMNGSALEHVV-EFGLDYPEGMAVDWLGKN----LYWADT--------------GTNRIEVSKL---------- 109 (628)
T ss_dssp TEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET----------
T ss_pred CeEEEEECCCCCcEEEE-eCCCCCcceEEEEeCCCE----EEEEEC--------------CCCEEEEEec----------
Confidence 67999999887666552 222224567788888887 777642 2247999997
Q ss_pred hhhccCCCCCCceecC-CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt-~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
++...+.|. ..-......++.|....|+|+.... ..+|+++++++...+.+...
T Consensus 110 -------dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~---------~~~I~r~~~dG~~~~~l~~~--------- 164 (628)
T 4a0p_A 110 -------DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG---------KPKIDRAAMDGSERTTLVPN--------- 164 (628)
T ss_dssp -------TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS---------
T ss_pred -------CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC---------CCEEEEEeCCCCceEEEECC---------
Confidence 555555554 3333567888999878898886432 24699999887554332210
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCCC
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
.. .+..+++.++++.||++-. ....|+++|++++..+.+..... .-..++.+++.+|++. ..
T Consensus 165 ----~~-------~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~--~P~glav~~~~ly~tD---~~ 226 (628)
T 4a0p_A 165 ----VG-------RANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLP--HPFGLTQYQDYIYWTD---WS 226 (628)
T ss_dssp ----CS-------SEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCS--CEEEEEEETTEEEEEE---TT
T ss_pred ----CC-------CcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCC--CceEEEEECCEEEEec---CC
Confidence 00 1235667787888888654 44589999997766644432221 2235566677887765 23
Q ss_pred CCeEEEEeecccC
Q 005093 401 VPQVKYGYFVDKA 413 (715)
Q Consensus 401 p~~l~~~~~~~~~ 413 (715)
...|++++..+++
T Consensus 227 ~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 227 RRSIERANKTSGQ 239 (628)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCEEEEEECCCCC
Confidence 4468888755443
No 477
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.61 E-value=0.02 Score=56.34 Aligned_cols=172 Identities=10% Similarity=-0.012 Sum_probs=91.2
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|+++|+ +++...+...........+.++|||+ +++... ....|+++|.
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 169 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-----LWFTEN--------------QNNAIGRITE---------- 169 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-----EEEEeC--------------CCCEEEEEcC----------
Confidence 56888888 55555442111223456778899885 665541 2236888883
Q ss_pred hhhccCCCCCCceec--CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 242 ELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~~~~~l--t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
+++...+ ...........++++|+ |++..... ..|++++. ++....+.
T Consensus 170 --------~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~----------~~i~~~~~-~g~~~~~~---------- 219 (299)
T 2z2n_A 170 --------SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIG----------NKIGRITT-SGEITEFK---------- 219 (299)
T ss_dssp --------TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT----------TEEEEECT-TCCEEEEE----------
T ss_pred --------CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCC----------ceEEEECC-CCcEEEEE----------
Confidence 3444332 22233456788899987 54444321 35888887 43321110
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--CCceeEEEeecCCEEEEEEeC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--~~~~~~~~s~~~~~l~~~~~~ 397 (715)
..... ..+..+.++++|+ +++... ....|+++|+ +++...+.... .......+ .++.+++...
T Consensus 220 -~~~~~-------~~~~~i~~~~~g~-l~v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~- 284 (299)
T 2z2n_A 220 -IPTPN-------ARPHAITAGAGID-LWFTEW--GANKIGRLTS-NNIIEEYPIQIKSAEPHGICF--DGETIWFAME- 284 (299)
T ss_dssp -CSSTT-------CCEEEEEECSTTC-EEEEET--TTTEEEEEET-TTEEEEEECSSSSCCEEEEEE--CSSCEEEEET-
T ss_pred -CCCCC-------CCceeEEECCCCC-EEEecc--CCceEEEECC-CCceEEEeCCCCCCccceEEe--cCCCEEEEec-
Confidence 00000 0233456778887 666542 2357889998 57766653222 11222233 4445655442
Q ss_pred CCCCCeEEEEeecc
Q 005093 398 PVDVPQVKYGYFVD 411 (715)
Q Consensus 398 ~~~p~~l~~~~~~~ 411 (715)
...|+++++.+
T Consensus 285 ---~~~l~~~~~~~ 295 (299)
T 2z2n_A 285 ---CDKIGKLTLIK 295 (299)
T ss_dssp ---TTEEEEEEEC-
T ss_pred ---CCcEEEEEcCc
Confidence 24677777643
No 478
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.61 E-value=0.011 Score=56.65 Aligned_cols=205 Identities=10% Similarity=0.118 Sum_probs=111.2
Q ss_pred ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeec
Q 005093 99 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK 178 (715)
Q Consensus 99 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~ 178 (715)
+++++|.||++.|+.+.+. ...|+.+|+++...+.+.
T Consensus 29 lSGla~~~~~~~L~aV~d~-------------------------------------------~~~I~~ld~~g~v~~~i~ 65 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK-------------------------------------------PAAIVEMTTNGDLIRTIP 65 (255)
T ss_dssp EEEEEEETTTTEEEEEEET-------------------------------------------TEEEEEEETTCCEEEEEE
T ss_pred cceeEEeCCCCEEEEEECC-------------------------------------------CCeEEEEeCCCCEEEEEe
Confidence 3899999999888877553 267999999844444542
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc---ee
Q 005093 179 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VN 255 (715)
Q Consensus 179 ~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 255 (715)
..+......+++.++|. ++.+. + ++..|++++++ ..++. ..
T Consensus 66 -l~g~~D~EGIa~~~~g~-----~~vs~-E-------------~~~~l~~~~v~----------------~~~~i~~~~~ 109 (255)
T 3qqz_A 66 -LDFVKDLETIEYIGDNQ-----FVISD-E-------------RDYAIYVISLT----------------PNSEVKILKK 109 (255)
T ss_dssp -CSSCSSEEEEEECSTTE-----EEEEE-T-------------TTTEEEEEEEC----------------TTCCEEEEEE
T ss_pred -cCCCCChHHeEEeCCCE-----EEEEE-C-------------CCCcEEEEEcC----------------CCCeeeeeee
Confidence 22223456777777664 33332 1 22467777652 11211 11
Q ss_pred c------CCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccc
Q 005093 256 L------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 329 (715)
Q Consensus 256 l------t~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g 329 (715)
. ..........+|+|++++|+.+..+. ...||.++--. ....++... + +.+....
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---------p~~i~~~~g~~-~~~~l~i~~-~--~~~~~~~------ 170 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---------PIEVYKVNGLL-SSNELHISK-D--KALQRQF------ 170 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---------SEEEEEEESTT-CSSCCEEEE-C--HHHHHTC------
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECcC---------CceEEEEcccc-cCCceeeec-c--hhhcccc------
Confidence 1 12233468899999999998777653 23688887100 001111100 0 0000000
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC---------CceeEEEeecCCEEEEEEeCCCC
Q 005093 330 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVD 400 (715)
Q Consensus 330 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~---------~~~~~~~s~~~~~l~~~~~~~~~ 400 (715)
.......+.+.|....+|+.+... ..|..+|.++..+..+....+ ......++++|+ ||+++ .
T Consensus 171 -~~~d~S~l~~dp~tg~lliLS~~s--~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvs----E 242 (255)
T 3qqz_A 171 -TLDDVSGAEFNQQKNTLLVLSHES--RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVS----E 242 (255)
T ss_dssp -CSSCCCEEEEETTTTEEEEEETTT--TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEE----T
T ss_pred -ccCCceeEEEcCCCCeEEEEECCC--CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEc----C
Confidence 011345566777777788876543 588889986553333333322 123346666664 66553 3
Q ss_pred CCeEEEEee
Q 005093 401 VPQVKYGYF 409 (715)
Q Consensus 401 p~~l~~~~~ 409 (715)
|..+|++..
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 446777653
No 479
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.59 E-value=0.003 Score=64.58 Aligned_cols=103 Identities=11% Similarity=-0.079 Sum_probs=61.3
Q ss_pred CCceEEEEecCCCC-CC-eEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCC
Q 005093 53 SGSKLLVVRNPENE-SP-IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGS 129 (715)
Q Consensus 53 dg~~la~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~ 129 (715)
+..+ +|+.+.+.+ -. .+..++ .+++....+..... -++.+||||++|+.........
T Consensus 30 ~~~~-~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-----------P~i~~spDg~~lyVan~~~~r~-------- 89 (368)
T 1mda_H 30 ISRR-SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-----------SLAVAGHSGSDFALASTSFARS-------- 89 (368)
T ss_dssp CTTE-EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-----------CEEEECTTSSCEEEEEEEETTT--------
T ss_pred CCCe-EEEECCccCCccceEEEEECCCCeEEEEEeCCCC-----------CceEECCCCCEEEEEccccccc--------
Confidence 3344 677665422 12 677788 66666655554332 2799999999987764311000
Q ss_pred CCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCC--C----CCccceEEEecCCCCCccEEE
Q 005093 130 TKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP--K----SLSVGQVVWAPLNEGLHQYLV 203 (715)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~----~~~~~~~~~spdg~~~~~~i~ 203 (715)
..|+ ....|.++|+.++++..-.... . ......+.+||||++ ++
T Consensus 90 ---------------------~~G~-----~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~----ly 139 (368)
T 1mda_H 90 ---------------------AKGK-----RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC----LL 139 (368)
T ss_dssp ---------------------TSSS-----EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC----EE
T ss_pred ---------------------ccCC-----CCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE----EE
Confidence 0022 3478999999998865431011 1 123568899999997 55
Q ss_pred EE
Q 005093 204 FV 205 (715)
Q Consensus 204 ~~ 205 (715)
..
T Consensus 140 Va 141 (368)
T 1mda_H 140 FF 141 (368)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 480
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.52 E-value=0.00036 Score=73.29 Aligned_cols=126 Identities=21% Similarity=0.207 Sum_probs=74.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHH------------H------HhCCcEEEEEcC-CCCC
Q 005093 462 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF------------L------SSVGYSLLIVNY-RGSL 522 (715)
Q Consensus 462 g~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~------------l------a~~G~~vi~~d~-rG~~ 522 (715)
+..+..|++...+ .....|+||++||||+.... + ..+.. + =.+-..++.+|. +|.|
T Consensus 31 ~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~--~-g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtG 105 (452)
T 1ivy_A 31 SKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSL--D-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVG 105 (452)
T ss_dssp TEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTH--H-HHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTST
T ss_pred CCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHH--H-HHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCC
Confidence 4567766665432 33568999999999987432 1 11100 0 013467999996 5643
Q ss_pred CCchhhhhcCCCCCCc---cchhhHHHHH-HHHHHcCCCCCceEEEEEeChhHHHHHHHHhh----CCCceeEEEecCCc
Q 005093 523 GFGEEALQSLPGKVGS---QDVNDVLTAI-DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ----APDKFVAAAARNPL 594 (715)
Q Consensus 523 ~~g~~~~~~~~~~~~~---~~~~d~~~~i-~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~----~p~~~~~~v~~~~~ 594 (715)
+.... ...+.. ....|...++ +|+...+.....++.|+|+|+||..+..+|.. .+-.++++++.+|+
T Consensus 106 -fS~~~----~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 106 -FSYSD----DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp -TCEES----SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred -cCCcC----CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCc
Confidence 32211 111111 1234444443 44444334556889999999999966655542 34578999999998
Q ss_pred chh
Q 005093 595 CNL 597 (715)
Q Consensus 595 ~~~ 597 (715)
++.
T Consensus 181 ~d~ 183 (452)
T 1ivy_A 181 SSY 183 (452)
T ss_dssp SBH
T ss_pred cCh
Confidence 764
No 481
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.42 E-value=0.011 Score=58.91 Aligned_cols=160 Identities=12% Similarity=0.190 Sum_probs=93.1
Q ss_pred cceEEeeCCCCceEEEEecCCC------------CCCeEEEEecCCccEEEEecCccccccccCCCcccceeec----CC
Q 005093 44 GASAVVPSPSGSKLLVVRNPEN------------ESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN----SD 107 (715)
Q Consensus 44 ~~~~~~~Spdg~~la~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wS----pD 107 (715)
.+...+++|||+ |++.....+ ....++.+...++...+....... ..+.|+ ||
T Consensus 118 ~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----------~~i~~~~~~d~d 186 (314)
T 1pjx_A 118 GCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFP----------NGIAVRHMNDGR 186 (314)
T ss_dssp CCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSE----------EEEEEEECTTSC
T ss_pred CCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCc----------ceEEEecccCCC
Confidence 467789999996 444432210 123577776445554443221122 578999 99
Q ss_pred CCeEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEcc-CCceE---eecCCCCC
Q 005093 108 ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQ---AVKGIPKS 183 (715)
Q Consensus 108 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~g~~~---~l~~~~~~ 183 (715)
|+.|++.... ...|++++++ +++.. .+......
T Consensus 187 g~~l~v~~~~-------------------------------------------~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 187 PYQLIVAETP-------------------------------------------TKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEEEEEETT-------------------------------------------TTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCEEEEEECC-------------------------------------------CCeEEEEECCCCCccccceEEEECCCC
Confidence 9877664221 2568888876 45422 11001111
Q ss_pred --CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCC-ceecCCCC
Q 005093 184 --LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI 260 (715)
Q Consensus 184 --~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~ 260 (715)
.....+.+++||+ |++... ....|+++|. ++++ ...+..+.
T Consensus 224 ~~~~p~~i~~d~~G~-----l~v~~~--------------~~~~i~~~d~-----------------~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 224 HEGGADGMDFDEDNN-----LLVANW--------------GSSHIEVFGP-----------------DGGQPKMRIRCPF 267 (314)
T ss_dssp SSCEEEEEEEBTTCC-----EEEEEE--------------TTTEEEEECT-----------------TCBSCSEEEECSS
T ss_pred CCCCCCceEECCCCC-----EEEEEc--------------CCCEEEEEcC-----------------CCCcEeEEEeCCC
Confidence 2355688999985 555432 2236889986 5333 33443333
Q ss_pred ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCC
Q 005093 261 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 303 (715)
Q Consensus 261 ~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 303 (715)
.....++++|||+.|++..... ..|+++++...
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~----------~~l~~~~~~~~ 300 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN----------NAVWKFEWQRN 300 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT----------TEEEEEECSSC
T ss_pred CCceeEEECCCCCEEEEEeCCC----------CeEEEEeCCCC
Confidence 4577889999999887666442 35888887653
No 482
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=97.39 E-value=0.00052 Score=69.22 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=61.6
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEEEcCCCCCCCchhhhhcCCCCCCccchhhHHHHHHHHHHcCCCC
Q 005093 479 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 558 (715)
Q Consensus 479 ~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~~d~rG~~~~g~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~d 558 (715)
+..+.++++||.+.. ...|..+...|. +.|+.+|+++.. + ...++++.+.+...+... ..
T Consensus 44 ~~~~~l~~~hg~~g~--~~~~~~~~~~l~---~~v~~~~~~~~~----------~----~~~~~~~a~~~~~~i~~~-~~ 103 (316)
T 2px6_A 44 SSERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAA----------P----LDSIHSLAAYYIDCIRQV-QP 103 (316)
T ss_dssp CSSCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTS----------C----TTCHHHHHHHHHHHHTTT-CS
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhcC---CCEEEEECCCCC----------C----cCCHHHHHHHHHHHHHHh-CC
Confidence 345679999996654 446666666663 899999998310 1 123555554443333332 12
Q ss_pred CceEEEEEeChhHHHHHHHHhhCC---Cc---eeEEEecCCc
Q 005093 559 PSKVTVVGGSHGGFLTTHLIGQAP---DK---FVAAAARNPL 594 (715)
Q Consensus 559 ~~~i~l~G~S~GG~~a~~~a~~~p---~~---~~~~v~~~~~ 594 (715)
..++.++||||||.++..++.+.+ .. ++.++++++.
T Consensus 104 ~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 104 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 367999999999999999887653 34 7778776654
No 483
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.38 E-value=0.0091 Score=62.96 Aligned_cols=170 Identities=15% Similarity=0.143 Sum_probs=90.9
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+||+++++..... ......+..+.|++ .. ++..+ .+..|.++|+
T Consensus 193 g~i~vwd~~~~~~~~~~-~~h~~~v~~l~~~~--~~----l~s~s---------------~dg~i~vwd~---------- 240 (435)
T 1p22_A 193 STVRVWDVNTGEMLNTL-IHHCEAVLHLRFNN--GM----MVTCS---------------KDRSIAVWDM---------- 240 (435)
T ss_dssp SCEEEEESSSCCEEEEE-CCCCSCEEEEECCT--TE----EEEEE---------------TTSCEEEEEC----------
T ss_pred CeEEEEECCCCcEEEEE-cCCCCcEEEEEEcC--CE----EEEee---------------CCCcEEEEeC----------
Confidence 56999999988765431 22333566677753 34 54443 2236778886
Q ss_pred hhhccCCCCCCc----eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeee
Q 005093 242 ELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 317 (715)
Q Consensus 242 ~~~~~~~~~~~~----~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~ 317 (715)
.++.. ..+......+....| +|+.|+..+.+. .|.++|+.+++......
T Consensus 241 -------~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg-----------~i~vwd~~~~~~~~~~~------- 293 (435)
T 1p22_A 241 -------ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR-----------TIKVWNTSTCEFVRTLN------- 293 (435)
T ss_dssp -------SSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS-----------EEEEEETTTCCEEEEEE-------
T ss_pred -------CCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC-----------eEEEEECCcCcEEEEEc-------
Confidence 33332 344455556666666 788887666542 48888987754311100
Q ss_pred ceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeC
Q 005093 318 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
. +...+..+.| +++ ++++...++ .|..+|+.+++......... .....++.+++.++....+
T Consensus 294 ---~---------~~~~v~~~~~--~~~-~l~~g~~dg--~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~l~sg~~d 355 (435)
T 1p22_A 294 ---G---------HKRGIACLQY--RDR-LVVSGSSDN--TIRLWDIECGACLRVLEGHE-ELVRCIRFDNKRIVSGAYD 355 (435)
T ss_dssp ---C---------CSSCEEEEEE--ETT-EEEEEETTS--CEEEEETTTCCEEEEECCCS-SCEEEEECCSSEEEEEETT
T ss_pred ---C---------CCCcEEEEEe--CCC-EEEEEeCCC--eEEEEECCCCCEEEEEeCCc-CcEEEEEecCCEEEEEeCC
Confidence 0 0011223334 455 444444444 46667888887665444322 1233445566655443322
Q ss_pred CCCCCeEEEEeeccc
Q 005093 398 PVDVPQVKYGYFVDK 412 (715)
Q Consensus 398 ~~~p~~l~~~~~~~~ 412 (715)
..|.+.++.++
T Consensus 356 ----g~i~vwd~~~~ 366 (435)
T 1p22_A 356 ----GKIKVWDLVAA 366 (435)
T ss_dssp ----SCEEEEEHHHH
T ss_pred ----CcEEEEECCCC
Confidence 24666666443
No 484
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.38 E-value=0.037 Score=54.40 Aligned_cols=235 Identities=11% Similarity=0.049 Sum_probs=123.2
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
..+...+++|||+ |.+. .. ....++.+...++..... .+... .....+.++|||+ |++....
T Consensus 15 ~~~~~i~~d~~g~-l~v~-~~--~~~~v~~~d~~~~~~~~~-~~~~~-------~~~~~i~~~~~g~-l~v~~~~----- 76 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWIT-QH--KANMISCINLDGKITEYP-LPTPD-------AKVMCLTISSDGE-VWFTENA----- 76 (299)
T ss_dssp CCEEEEEECTTSC-EEEE-ET--TTTEEEEECTTCCEEEEE-CSSTT-------CCEEEEEECTTSC-EEEEETT-----
T ss_pred CCccceEECCCCC-EEEE-ec--CCCcEEEEcCCCCeEEec-CCccc-------CceeeEEECCCCC-EEEeCCC-----
Confidence 4578889999997 3333 32 123566666335443322 22111 1226788999986 5443211
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
...|++++.+ ++.+.+...........+.++|||+ |
T Consensus 77 --------------------------------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-----l 112 (299)
T 2z2n_A 77 --------------------------------------ANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD-----I 112 (299)
T ss_dssp --------------------------------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-----E
T ss_pred --------------------------------------CCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC-----E
Confidence 2458888876 4444442011223456778888885 5
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecC--CCCccccceeEcCCCCeEEEEec
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt--~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
++... ....|+++|. +++...+. ..........+++||+ |++...
T Consensus 113 ~v~~~--------------~~~~i~~~d~------------------~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~ 159 (299)
T 2z2n_A 113 WFTEM--------------NGNRIGRITD------------------DGKIREYELPNKGSYPSFITLGSDNA-LWFTEN 159 (299)
T ss_dssp EEEET--------------TTTEEEEECT------------------TCCEEEEECSSTTCCEEEEEECTTSC-EEEEET
T ss_pred EEEec--------------CCceEEEECC------------------CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeC
Confidence 55531 1236888883 33333322 2233467788899985 555543
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
.. ..|++++. ++....+.. .... ..+..+.+.++|+ +++... ....|+
T Consensus 160 ~~----------~~i~~~~~-~g~~~~~~~-----------~~~~-------~~~~~i~~~~~g~-l~v~~~--~~~~i~ 207 (299)
T 2z2n_A 160 QN----------NAIGRITE-SGDITEFKI-----------PTPA-------SGPVGITKGNDDA-LWFVEI--IGNKIG 207 (299)
T ss_dssp TT----------TEEEEECT-TCCEEEEEC-----------SSTT-------CCEEEEEECTTSS-EEEEET--TTTEEE
T ss_pred CC----------CEEEEEcC-CCcEEEeeC-----------CCCC-------CcceeEEECCCCC-EEEEcc--CCceEE
Confidence 32 35888887 433221100 0000 0123456778887 666543 234789
Q ss_pred EEECCCCcEEEecCCCC--CceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 361 SVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 361 ~~d~~tg~~~~l~~~~~--~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
++|+ +++...+..... ......++++|+ +++... ....|++++.
T Consensus 208 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~d~ 253 (299)
T 2z2n_A 208 RITT-SGEITEFKIPTPNARPHAITAGAGID-LWFTEW---GANKIGRLTS 253 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEEET
T ss_pred EECC-CCcEEEEECCCCCCCceeEEECCCCC-EEEecc---CCceEEEECC
Confidence 9999 787766533211 122234455544 554432 2345777665
No 485
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.37 E-value=0.065 Score=59.07 Aligned_cols=208 Identities=14% Similarity=0.078 Sum_probs=123.7
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 121 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 121 (715)
.......+.+.+.+|++... ....|+.+. +++..+.+...... ...++++.+.++.|++. +.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~---~~~~I~r~~~~g~~~~~v~~~~~~---------~p~GlAvD~~~~~lY~t-D~---- 411 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDD---EVRAIRRSFIDGSGSQFVVTAQIA---------HPDGIAVDWVARNLYWT-DT---- 411 (619)
T ss_dssp SSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTTEEEEE-ET----
T ss_pred CccEEEEEEcCCCeEEEEeC---CCCeEEEEEcCCCccEEEEECCCC---------CcCceEEecccCcEEEE-eC----
Confidence 45677888888888877643 234677777 44444444432111 12578888778888664 21
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccE
Q 005093 122 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 201 (715)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~ 201 (715)
....|.+.++++...+.+. ...-.....++..|....
T Consensus 412 --------------------------------------~~~~I~v~~~~G~~~~~l~-~~~l~~P~~iavdp~~G~---- 448 (619)
T 3s94_A 412 --------------------------------------GTDRIEVTRLNGTMRKILI-SEDLEEPRAIVLDPMVGY---- 448 (619)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCCSEEEEEEETTTTE----
T ss_pred --------------------------------------CCCcEEEEeCCCCeEEEEE-ECCCCCeeeEEEEcCCCc----
Confidence 2367999999887666662 112224567788887555
Q ss_pred EEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC-CCccccceeEcCCCCeEEEEec
Q 005093 202 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 202 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~~~~spdg~~l~~~~~ 280 (715)
|+|+-+. ....|+++++ ++...+.+.. .-.....+++++++++|+|+..
T Consensus 449 ly~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 449 MYWTDWG-------------EIPKIERAAL-----------------DGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEecCC-------------CCCEEEEEcc-----------------CCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 7776532 1247999997 4444444433 3445677899999999998875
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
.. ..|.++++++...+.+... .+. .+..++. ++..||++- .....|+
T Consensus 499 ~~----------~~I~~~~~dG~~~~~~~~~--------------~l~-----~P~glav--~~~~ly~tD--~~~~~I~ 545 (619)
T 3s94_A 499 KT----------DKIEVMNTDGTGRRVLVED--------------KIP-----HIFGFTL--LGDYVYWTD--WQRRSIE 545 (619)
T ss_dssp TT----------TEEEEEESSSCCCEEEEEC--------------CCC-----SSCCEEE--ETTEEEEEC--TTSSCEE
T ss_pred CC----------CEEEEEecCCCceEEEecc--------------CCC-----CcEEEEE--ECCEEEEee--cCCCeEE
Confidence 53 3688999876554322110 000 1122333 334566643 3345788
Q ss_pred EEECCCCcEEEec
Q 005093 361 SVNVSSGELLRIT 373 (715)
Q Consensus 361 ~~d~~tg~~~~l~ 373 (715)
++|..+|..+.+.
T Consensus 546 ~~~k~~g~~~~~~ 558 (619)
T 3s94_A 546 RVHKRSAEREVII 558 (619)
T ss_dssp EEESSSCCEEEEE
T ss_pred EEEcCCCceEEEe
Confidence 8888777554443
No 486
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.29 E-value=0.013 Score=55.95 Aligned_cols=201 Identities=11% Similarity=0.008 Sum_probs=110.4
Q ss_pred EEeeCCCCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 005093 47 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 125 (715)
Q Consensus 47 ~~~~Spdg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 125 (715)
...++ || + +|.+....+.+.+..++ .+|+..+...++... -+-..+++|++|+.+..
T Consensus 47 GL~~~-~~-~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~----------FgeGit~~g~~ly~ltw--------- 104 (262)
T 3nol_A 47 GFFYR-NG-Y-FYESTGLNGRSSIRKVDIESGKTLQQIELGKRY----------FGEGISDWKDKIVGLTW--------- 104 (262)
T ss_dssp EEEEE-TT-E-EEEEEEETTEEEEEEECTTTCCEEEEEECCTTC----------CEEEEEEETTEEEEEES---------
T ss_pred eEEEE-CC-E-EEEECCCCCCceEEEEECCCCcEEEEEecCCcc----------ceeEEEEeCCEEEEEEe---------
Confidence 34666 55 4 45655443566788888 778777766664332 23345667888866532
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEE
Q 005093 126 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFV 205 (715)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~ 205 (715)
....++++|+++.++..-. +-. ......++||+. |+.+
T Consensus 105 ----------------------------------~~~~v~v~D~~t~~~~~ti--~~~--~eG~glt~dg~~----L~~S 142 (262)
T 3nol_A 105 ----------------------------------KNGLGFVWNIRNLRQVRSF--NYD--GEGWGLTHNDQY----LIMS 142 (262)
T ss_dssp ----------------------------------SSSEEEEEETTTCCEEEEE--ECS--SCCCCEEECSSC----EEEC
T ss_pred ----------------------------------eCCEEEEEECccCcEEEEE--ECC--CCceEEecCCCE----EEEE
Confidence 1278999999988765431 111 133456789986 5544
Q ss_pred eecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC--Cc---cccceeEcCCCCeEEEEe
Q 005093 206 GWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--IS---SAFFPRFSPDGKFLVFLS 279 (715)
Q Consensus 206 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~--~~---~~~~~~~spdg~~l~~~~ 279 (715)
. ....|+.+|. ++.+. ..+.-. .. ......|. ||+ |+ +.
T Consensus 143 d---------------Gs~~i~~iDp-----------------~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-ly-an 187 (262)
T 3nol_A 143 D---------------GTPVLRFLDP-----------------ESLTPVRTITVTAHGEELPELNELEWV-DGE-IF-AN 187 (262)
T ss_dssp C---------------SSSEEEEECT-----------------TTCSEEEEEECEETTEECCCEEEEEEE-TTE-EE-EE
T ss_pred C---------------CCCeEEEEcC-----------------CCCeEEEEEEeccCCccccccceeEEE-CCE-EE-EE
Confidence 2 2247999996 55443 233221 11 12345676 674 54 43
Q ss_pred cCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 005093 280 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 359 (715)
Q Consensus 280 ~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l 359 (715)
.- ....|.++|..+++....- ++..+....... .+ -......++|+|+++.+|++.. .+..|
T Consensus 188 ~w---------~~~~I~vIDp~tG~V~~~I----d~~~L~~~~~~~-~~--~~~vlNGIA~dp~~~~lfVTGK--~Wp~~ 249 (262)
T 3nol_A 188 VW---------QTNKIVRIDPETGKVTGII----DLNGILAEAGPL-PS--PIDVLNGIAWDKEHHRLFVTGK--LWPKV 249 (262)
T ss_dssp ET---------TSSEEEEECTTTCBEEEEE----ECTTGGGGSCSC-CS--SCCCEEEEEEETTTTEEEEEET--TCSEE
T ss_pred Ec---------cCCeEEEEECCCCcEEEEE----ECCcCccccccc-cC--cCCceEEEEEcCCCCEEEEECC--CCCce
Confidence 32 1246999998887752110 000000000000 00 0012357889999998877653 45678
Q ss_pred EEEEC
Q 005093 360 ISVNV 364 (715)
Q Consensus 360 ~~~d~ 364 (715)
|.+.+
T Consensus 250 ~ev~~ 254 (262)
T 3nol_A 250 FEITL 254 (262)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87765
No 487
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.28 E-value=0.0098 Score=58.49 Aligned_cols=94 Identities=9% Similarity=0.036 Sum_probs=53.7
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++.++.....+...........++++|||+ |+++.. ....|+++|.
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 192 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-----IFISDN--------------RAHCVKVFNY---------- 192 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-----EEEEEG--------------GGTEEEEEET----------
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 56888887665555442111112456788999886 444431 2236888885
Q ss_pred hhhccCCCCCCceecCCC--CccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecC
Q 005093 242 ELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 301 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt~~--~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~ 301 (715)
.+.....+... .......+++|||+ |+.+.... ...|.+++..
T Consensus 193 -------~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~---------~~~i~~~~~~ 237 (286)
T 1q7f_A 193 -------EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHN---------NFNLTIFTQD 237 (286)
T ss_dssp -------TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSS---------SCEEEEECTT
T ss_pred -------CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCC---------CEEEEEECCC
Confidence 44444444332 13466788999996 54444321 1258888754
No 488
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.21 E-value=0.016 Score=58.52 Aligned_cols=145 Identities=8% Similarity=0.080 Sum_probs=73.6
Q ss_pred ceEEEEEccCCceEeec--CC-----CCC-CccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEeccc
Q 005093 162 PSLFVININSGEVQAVK--GI-----PKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 233 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~--~~-----~~~-~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 233 (715)
..|++++.++.....+. +. +.. .....++++||+.. |+.+.. .+..|.++++
T Consensus 166 ~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~----l~v~d~--------------~~~~I~~~~~-- 225 (329)
T 3fvz_A 166 SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ----LCVADR--------------ENGRIQCFKT-- 225 (329)
T ss_dssp CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE----EEEEET--------------TTTEEEEEET--
T ss_pred CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE----EEEEEC--------------CCCEEEEEEC--
Confidence 56788886554444441 00 011 12557889999665 555431 2347889996
Q ss_pred ccchhhhhhhhccCCCCCCc-eecCC--CCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCccc
Q 005093 234 YKSEASELELKESSSEDLPV-VNLTE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 310 (715)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~ 310 (715)
++++. ..+.. ........+|+| | +++......... ......+++++..+++....
T Consensus 226 ---------------~~G~~~~~~~~~~~~~~~~~~~~~p-g--~~~~~~g~~~v~--~~~~~~v~~~~~~~g~~~~~-- 283 (329)
T 3fvz_A 226 ---------------DTKEFVREIKHASFGRNVFAISYIP-G--FLFAVNGKPYFG--DQEPVQGFVMNFSSGEIIDV-- 283 (329)
T ss_dssp ---------------TTCCEEEEECCTTTTTCEEEEEEET-T--EEEEEECCCCTT--CSCCCCEEEEETTTCCEEEE--
T ss_pred ---------------CCCcEEEEEeccccCCCcceeeecC-C--EEEEeCCCEEec--cCCCcEEEEEEcCCCeEEEE--
Confidence 53443 33322 122456678898 3 334433321111 12334688888777553211
Q ss_pred ceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 005093 311 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 365 (715)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~ 365 (715)
+... ...+ ..+..+++++|| .||++.... .+|+++++.
T Consensus 284 --------~~~~-~~~~-----~~p~~ia~~~dG-~lyvad~~~--~~I~~~~~~ 321 (329)
T 3fvz_A 284 --------FKPV-RKHF-----DMPHDIVASEDG-TVYIGDAHT--NTVWKFTLT 321 (329)
T ss_dssp --------ECCS-SSCC-----SSEEEEEECTTS-EEEEEESSS--CCEEEEEEE
T ss_pred --------EcCC-CCcc-----CCeeEEEECCCC-CEEEEECCC--CEEEEEeCC
Confidence 0000 0001 123466788999 577665433 356666653
No 489
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.21 E-value=0.012 Score=62.15 Aligned_cols=169 Identities=16% Similarity=0.116 Sum_probs=92.6
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|.+||+++++..... ......+..+.|+ ++. ++..+ .+..|.++|+
T Consensus 179 g~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--~~~----l~s~s---------------~dg~i~~wd~---------- 226 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTL-YGHTSTVRCMHLH--EKR----VVSGS---------------RDATLRVWDI---------- 226 (445)
T ss_dssp SCEEEEETTTTEEEEEE-CCCSSCEEEEEEE--TTE----EEEEE---------------TTSEEEEEES----------
T ss_pred CeEEEEECCcCcEEEEE-CCCCCcEEEEEec--CCE----EEEEe---------------CCCEEEEEEC----------
Confidence 56999999988765431 2223345566664 554 55443 3346888887
Q ss_pred hhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCC-cccceeeeeece
Q 005093 242 ELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~-lt~~~~~~~~~~ 319 (715)
.+++ ...+......+....| ||+.|+..+.+. .|.++|+.+++... +..
T Consensus 227 -------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~--------- 277 (445)
T 2ovr_B 227 -------ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF-----------MVKVWDPETETCLHTLQG--------- 277 (445)
T ss_dssp -------SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS-----------CEEEEEGGGTEEEEEECC---------
T ss_pred -------CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC-----------EEEEEECCCCcEeEEecC---------
Confidence 4443 3445555556666666 788887666542 47888876643211 100
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeEEEeecCCEEEEEEeCCC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 399 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~~~~~l~~~~~~~~ 399 (715)
+...+..+.| +++.++ +...++ .|..+|+.+++......... .....++.+++.++....+
T Consensus 278 -----------~~~~v~~~~~--~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~d-- 338 (445)
T 2ovr_B 278 -----------HTNRVYSLQF--DGIHVV-SGSLDT--SIRVWDVETGNCIHTLTGHQ-SLTSGMELKDNILVSGNAD-- 338 (445)
T ss_dssp -----------CSSCEEEEEE--CSSEEE-EEETTS--CEEEEETTTCCEEEEECCCC-SCEEEEEEETTEEEEEETT--
T ss_pred -----------CCCceEEEEE--CCCEEE-EEeCCC--eEEEEECCCCCEEEEEcCCc-ccEEEEEEeCCEEEEEeCC--
Confidence 0012233445 676554 444344 46667888887665443322 1234566677755543321
Q ss_pred CCCeEEEEeeccc
Q 005093 400 DVPQVKYGYFVDK 412 (715)
Q Consensus 400 ~p~~l~~~~~~~~ 412 (715)
..|.+.++.++
T Consensus 339 --g~i~vwd~~~~ 349 (445)
T 2ovr_B 339 --STVKIWDIKTG 349 (445)
T ss_dssp --SCEEEEETTTC
T ss_pred --CeEEEEECCCC
Confidence 24666666443
No 490
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.20 E-value=0.08 Score=51.94 Aligned_cols=235 Identities=11% Similarity=0.037 Sum_probs=123.8
Q ss_pred ccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 005093 43 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 122 (715)
Q Consensus 43 ~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 122 (715)
......++++||+ |.+. .. ....+..+...++.... ..+... .....+.++++|+ |++...
T Consensus 20 ~~p~~i~~d~~g~-l~v~-~~--~~~~v~~~~~~~~~~~~-~~~~~~-------~~~~~i~~~~~g~-l~v~~~------ 80 (300)
T 2qc5_A 20 SGPYGITSSEDGK-VWFT-QH--KANKISSLDQSGRIKEF-EVPTPD-------AKVMCLIVSSLGD-IWFTEN------ 80 (300)
T ss_dssp CCEEEEEECTTSC-EEEE-ET--TTTEEEEECTTSCEEEE-ECSSTT-------CCEEEEEECTTSC-EEEEET------
T ss_pred CCcceeeECCCCC-EEEE-cC--CCCeEEEECCCCceEEE-ECCCCC-------CcceeEEECCCCC-EEEEec------
Confidence 4567788899987 3333 32 22356666633544432 222111 1225788889886 544321
Q ss_pred CCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEE
Q 005093 123 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 202 (715)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i 202 (715)
....|+++|.+ ++.+.+...........+.+.|+|+ +
T Consensus 81 -------------------------------------~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-----l 117 (300)
T 2qc5_A 81 -------------------------------------GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-----I 117 (300)
T ss_dssp -------------------------------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-----E
T ss_pred -------------------------------------CCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-----E
Confidence 12568888887 6555442111223456778888886 5
Q ss_pred EEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceec--CCCCccccceeEcCCCCeEEEEec
Q 005093 203 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSA 280 (715)
Q Consensus 203 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--t~~~~~~~~~~~spdg~~l~~~~~ 280 (715)
++... ....|++++. + ++...+ ...........++++|+ |++...
T Consensus 118 ~v~~~--------------~~~~i~~~~~-----------------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 164 (300)
T 2qc5_A 118 WFTQL--------------NGDRIGKLTA-----------------D-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTEN 164 (300)
T ss_dssp EEEET--------------TTTEEEEECT-----------------T-SCEEEEECSSTTCCEEEEEECTTSS-EEEEET
T ss_pred EEEcc--------------CCCeEEEECC-----------------C-CCEEEccCCCCCCCceeEEECCCCC-EEEEec
Confidence 55431 1236888885 4 444433 22233467788899998 655543
Q ss_pred CCCCCCCCccccceeEeeecCCCCCCCcccceeeeeeceecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 005093 281 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 360 (715)
Q Consensus 281 ~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~ 360 (715)
.. ..|++++. +++...+. ...... .+..+.+.++|+ +++.... ...|+
T Consensus 165 ~~----------~~i~~~~~-~g~~~~~~-----------~~~~~~-------~~~~i~~d~~g~-l~v~~~~--~~~i~ 212 (300)
T 2qc5_A 165 QN----------NSIGRITN-TGKLEEYP-----------LPTNAA-------APVGITSGNDGA-LWFVEIM--GNKIG 212 (300)
T ss_dssp TT----------TEEEEECT-TCCEEEEE-----------CSSTTC-------CEEEEEECTTSS-EEEEETT--TTEEE
T ss_pred CC----------CeEEEECC-CCcEEEee-----------CCCCCC-------CcceEEECCCCC-EEEEccC--CCEEE
Confidence 22 35888886 33321110 000000 123455677886 6665432 34788
Q ss_pred EEECCCCcEEEecCCCC--CceeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 005093 361 SVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 361 ~~d~~tg~~~~l~~~~~--~~~~~~~s~~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
++|. +++...+..... ......++++++ |++... ....|++++.
T Consensus 213 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~~~~i~~~~~ 258 (300)
T 2qc5_A 213 RITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEW---GANQIGRITN 258 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEET---TTTEEEEECT
T ss_pred EEcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEecc---CCCeEEEECC
Confidence 8998 676665532211 122234455544 554442 2345777665
No 491
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.16 E-value=0.097 Score=54.92 Aligned_cols=158 Identities=9% Similarity=0.126 Sum_probs=88.0
Q ss_pred ccceEEeeCCC--CceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 43 TGASAVVPSPS--GSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 43 ~~~~~~~~Spd--g~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
.....++|+|+ +..|+ +.+.. ..++.+. .++....+....... ..++|+|||+ | |+++...
T Consensus 139 ~~P~gvavd~~s~~g~Ly-v~D~~---~~I~~id~~~g~v~~~~~~~~~P----------~giavd~dG~-l-yVad~~~ 202 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLY-WVGQR---DAFRHVDFVNQYVDIKTTNIGQC----------ADVNFTLNGD-M-VVVDDQS 202 (433)
T ss_dssp SCCCEEEECTTTTTCEEE-EECBT---SCEEEEETTTTEEEEECCCCSCE----------EEEEECTTCC-E-EEEECCS
T ss_pred CCCceEEEccccCCCEEE-EEeCC---CCEEEEECCCCEEEEeecCCCCc----------cEEEECCCCC-E-EEEcCCC
Confidence 44677899995 45554 44442 4688887 466655443311122 6899999999 5 4444221
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce--EeecCCCCCCccceEEEecCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~--~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
.. ....++.++.+++.. ..+ ..-.....+++.|++..
T Consensus 203 ~~--------------------------------------~~~gv~~~~~~~~~~~~~~~---~~~~~P~giavd~~~G~ 241 (433)
T 4hw6_A 203 SD--------------------------------------TNTGIYLFTRASGFTERLSL---CNARGAKTCAVHPQNGK 241 (433)
T ss_dssp CT--------------------------------------TSEEEEEECGGGTTCCEEEE---EECSSBCCCEECTTTCC
T ss_pred Cc--------------------------------------ccceEEEEECCCCeeccccc---cccCCCCEEEEeCCCCe
Confidence 00 012344444443322 112 11123446788995555
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCc-eecCCC--CccccceeEcCCCCe
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--ISSAFFPRFSPDGKF 274 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~--~~~~~~~~~spdg~~ 274 (715)
|+++.. .+..|++++. +++.. +.+... ......++|+|||++
T Consensus 242 ----lyv~d~--------------~~~~V~~~d~-----------------~~g~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 242 ----IYYTRY--------------HHAMISSYDP-----------------ATGTLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp ----EEECBT--------------TCSEEEEECT-----------------TTCCEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred ----EEEEEC--------------CCCEEEEEEC-----------------CCCeEEEEEeccCCCCCcccEEEeCCCCE
Confidence 666542 2347999996 54554 333211 122335899999998
Q ss_pred EEEEecCCCCCCCCccccceeEeeecCC
Q 005093 275 LVFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 275 l~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
|+++.... ..|++++.+.
T Consensus 287 LYvad~~~----------~~I~~~~~d~ 304 (433)
T 4hw6_A 287 AYIIYNGK----------HCIYRVDYNR 304 (433)
T ss_dssp EEEEETTT----------TEEEEEEBCT
T ss_pred EEEEeCCC----------CEEEEEeCCC
Confidence 88776543 4688877653
No 492
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.13 E-value=0.04 Score=52.08 Aligned_cols=177 Identities=13% Similarity=0.203 Sum_probs=98.1
Q ss_pred CceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhh
Q 005093 161 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 240 (715)
Q Consensus 161 ~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (715)
.+.|.++|+++|++..-...+.. ....-.+++|++ |+-..|. ...++++|.
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~--~fgeGi~~~~~~----ly~ltw~--------------~~~v~v~D~--------- 92 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPP--YFGAGIVAWRDR----LIQLTWR--------------NHEGFVYDL--------- 92 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCCEEEEEeCCCC--cceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 37899999999987654212222 222334566776 6665542 347999997
Q ss_pred hhhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCC-Ccccceeeeeec
Q 005093 241 LELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLEKIVDVIPV 318 (715)
Q Consensus 241 ~~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~-~lt~~~~~~~~~ 318 (715)
++.+. .++.-. . ..-..++||++|+ .++.+ ..|+++|..+.+.. .+. +
T Consensus 93 --------~tl~~~~ti~~~-~--~Gwglt~dg~~L~-vSdgs----------~~l~~iDp~t~~~~~~I~--------V 142 (243)
T 3mbr_X 93 --------ATLTPRARFRYP-G--EGWALTSDDSHLY-MSDGT----------AVIRKLDPDTLQQVGSIK--------V 142 (243)
T ss_dssp --------TTTEEEEEEECS-S--CCCEEEECSSCEE-EECSS----------SEEEEECTTTCCEEEEEE--------C
T ss_pred --------CcCcEEEEEeCC-C--CceEEeeCCCEEE-EECCC----------CeEEEEeCCCCeEEEEEE--------E
Confidence 54443 333322 1 2234467888775 45432 36999997774431 111 1
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-------------C-CceeEEE
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------S-NFSWSLL 384 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-------------~-~~~~~~~ 384 (715)
... ...+ .....+.|. +|+ ||.. .+. ...|.++|+++|++....... . .....++
T Consensus 143 ~~~--g~~~-----~~lNeLe~~-~G~-lyan-vw~-s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 143 TAG--GRPL-----DNLNELEWV-NGE-LLAN-VWL-TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp EET--TEEC-----CCEEEEEEE-TTE-EEEE-ETT-TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred ccC--Cccc-----ccceeeEEe-CCE-EEEE-ECC-CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEE
Confidence 000 0000 011233454 664 6543 333 358999999999987653311 1 1233567
Q ss_pred eecCCEEEEEEeCCCCCCeEEEEeec
Q 005093 385 TLDGDNIIAVSSSPVDVPQVKYGYFV 410 (715)
Q Consensus 385 s~~~~~l~~~~~~~~~p~~l~~~~~~ 410 (715)
++++++|+.+.-.. |.+|.+.+.
T Consensus 212 d~~~~~lfVTGK~w---p~~~~v~~~ 234 (243)
T 3mbr_X 212 DAEHDRLFVTGKRW---PMLYEIRLT 234 (243)
T ss_dssp ETTTTEEEEEETTC---SEEEEEEEC
T ss_pred cCCCCEEEEECCCC---CcEEEEEEe
Confidence 77788888777444 557766654
No 493
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.09 E-value=0.12 Score=52.64 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=37.7
Q ss_pred ccccceEEeeCCCCceEEEEecCCCCCCeEEEEecCCccEEEEecCccccccccCCCcccceeecCC---CCeEEEEe
Q 005093 41 EMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD---ETLIAYVA 115 (715)
Q Consensus 41 ~~~~~~~~~~Spdg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpD---g~~la~~~ 115 (715)
++......++.|||+ | |+.+.. ..++.+. +++...+...+... -+.....++.|+|| +++|++..
T Consensus 29 ~l~~P~~ia~~pdG~-l-~V~e~~---g~I~~i~-~g~~~~~~~~~v~~----~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 29 GLEVPWALAFLPDGG-M-LIAERP---GRIRLFR-EGRLSTYAELSVYH----RGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CCSCEEEEEECTTSC-E-EEEETT---TEEEEEE-TTEEEEEEECCCCC----STTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCceEEEEcCCCe-E-EEEeCC---CeEEEEE-CCCccEeecceEee----cCCCCceeEEECCCCCCCCEEEEEE
Confidence 345578899999997 4 444442 3677666 45544443332000 01123468999999 77776653
No 494
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.06 E-value=0.016 Score=58.89 Aligned_cols=69 Identities=9% Similarity=0.181 Sum_probs=38.7
Q ss_pred cccceEEeeCCCCceEEEEecCC--CCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEE
Q 005093 42 MTGASAVVPSPSGSKLLVVRNPE--NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 114 (715)
Q Consensus 42 ~~~~~~~~~Spdg~~la~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~ 114 (715)
+..+...+++|+|+ |.++.... .....++.++ .+++..+...++.... .....+..+.++|++..+++.
T Consensus 66 ~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~---~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 66 FDTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT---LSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CSCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS---CTTCCCCEEEEETTTTEEEEE
T ss_pred eeEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc---ccccccceEEEecCCCEEEEE
Confidence 45678889999985 54443210 0134677777 5676555555432110 001123688999987665443
No 495
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.03 E-value=0.12 Score=50.75 Aligned_cols=170 Identities=9% Similarity=-0.019 Sum_probs=89.1
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
..|++++.+ ++...+...........+.+.|+|+ |++... ....|++++.
T Consensus 125 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-----l~v~~~--------------~~~~i~~~~~---------- 174 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-----LWFTEN--------------QNNSIGRITN---------- 174 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-----EEEEET--------------TTTEEEEECT----------
T ss_pred CeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-----EEEEec--------------CCCeEEEECC----------
Confidence 568888887 6655432011223456778888886 555431 1236888884
Q ss_pred hhhccCCCCCCceecC--CCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeece
Q 005093 242 ELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 319 (715)
Q Consensus 242 ~~~~~~~~~~~~~~lt--~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~ 319 (715)
+++...+. ..........++++|+ |++..... ..|++++. ++.......
T Consensus 175 --------~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~----------~~i~~~~~-~g~~~~~~~--------- 225 (300)
T 2qc5_A 175 --------TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMG----------NKIGRITT-TGEISEYDI--------- 225 (300)
T ss_dssp --------TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT----------TEEEEECT-TCCEEEEEC---------
T ss_pred --------CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccCC----------CEEEEEcC-CCcEEEEEC---------
Confidence 33333332 2223456778899885 65554332 25888886 322211100
Q ss_pred ecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--CCceeEEEeecCCEEEEEEeC
Q 005093 320 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 320 ~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--~~~~~~~~s~~~~~l~~~~~~ 397 (715)
.... ..+..+.+.++|+ |++... +...|+++|+ +++...+.... .......++++|. +++.. .
T Consensus 226 --~~~~-------~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~-~ 290 (300)
T 2qc5_A 226 --PTPN-------ARPHAITAGKNSE-IWFTEW--GANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGS-VWFAL-K 290 (300)
T ss_dssp --SSTT-------CCEEEEEECSTTC-EEEEET--TTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSC-EEEEC-S
T ss_pred --CCCC-------CCceEEEECCCCC-EEEecc--CCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCC-EEEEc-c
Confidence 0000 0123456778887 666543 2357888998 56666553321 1222234455544 44432 2
Q ss_pred CCCCCeEEEEee
Q 005093 398 PVDVPQVKYGYF 409 (715)
Q Consensus 398 ~~~p~~l~~~~~ 409 (715)
. .|+++++
T Consensus 291 --~--~i~~~~p 298 (300)
T 2qc5_A 291 --C--KIGKLNL 298 (300)
T ss_dssp --S--EEEEEEE
T ss_pred --C--ceEEeCC
Confidence 2 6777664
No 496
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.02 E-value=0.021 Score=60.14 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=54.2
Q ss_pred ceEEEEEccCCceE----eecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccch
Q 005093 162 PSLFVININSGEVQ----AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 237 (715)
Q Consensus 162 ~~l~~~~~~~g~~~----~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 237 (715)
..|.+||+.+++.. .+ ......+..+.| +++. |+..+ .+..|.++|+
T Consensus 233 g~i~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~----l~s~~---------------~dg~i~vwd~------ 283 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVL--VGHRAAVNVVDF--DDKY----IVSAS---------------GDRTIKVWNT------ 283 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEE--CCCSSCEEEEEE--ETTE----EEEEE---------------TTSEEEEEET------
T ss_pred CcEEEEeCCCCCCceeeeEe--cCCCCcEEEEEe--CCCE----EEEEe---------------CCCeEEEEEC------
Confidence 56899999877643 22 222334555566 6775 55543 2346888887
Q ss_pred hhhhhhhccCCCCCC-ceecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCC
Q 005093 238 ASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 304 (715)
Q Consensus 238 ~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~ 304 (715)
.+++ ...+......+....| +++.|+..+.+. .|.++|+.++.
T Consensus 284 -----------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg-----------~i~iwd~~~~~ 327 (435)
T 1p22_A 284 -----------STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN-----------TIRLWDIECGA 327 (435)
T ss_dssp -----------TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS-----------CEEEEETTTCC
T ss_pred -----------CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC-----------eEEEEECCCCC
Confidence 4443 3445555555666666 567776665442 48888987754
No 497
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.98 E-value=0.023 Score=55.66 Aligned_cols=183 Identities=13% Similarity=0.111 Sum_probs=96.0
Q ss_pred cCceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhh
Q 005093 160 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 239 (715)
Q Consensus 160 ~~~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 239 (715)
....|+++|.++|+...-...........+.++|||+ |+++.. ..|+.+|.
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilvs~~----------------~~V~~~d~-------- 63 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-----ILFSYS----------------KGAKMITR-------- 63 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-----EEEECB----------------SEEEEECT--------
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-----EEEeCC----------------CCEEEECC--------
Confidence 4588999999888765432122113466788999998 444321 24667773
Q ss_pred hhhhhccCCCCCCceecCCCC-ccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeec
Q 005093 240 ELELKESSSEDLPVVNLTESI-SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 318 (715)
Q Consensus 240 ~~~~~~~~~~~~~~~~lt~~~-~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~ 318 (715)
.+.....+..+. .....+.++|||+.|+-.+.. ...|+.++.+++....+. +
T Consensus 64 ---------~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~----------~~~v~~vd~~Gk~l~~~~--------~ 116 (276)
T 3no2_A 64 ---------DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH----------PSTILEVNMKGEVLSKTE--------F 116 (276)
T ss_dssp ---------TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST----------TEEEEEECTTSCEEEEEE--------E
T ss_pred ---------CCCEEEEEcCCCCccccccEECCCCCEEEEecCC----------CCEEEEEeCCCCEEEEEe--------c
Confidence 333333333321 245678899999977654431 134777765332111110 0
Q ss_pred eecCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-CCCCceeEEEeecCCEEEEEEeC
Q 005093 319 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSS 397 (715)
Q Consensus 319 ~~~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~~~~~l~~~~~~ 397 (715)
. ....+.+ .....+...+||+.++ +.. ....++.+|.+ |+...-.. ....++ ....++++.++. ...
T Consensus 117 ---~--~~~~~~~-~~~~~v~~~~~G~~lv-~~~--~~~~v~~~d~~-G~~~w~~~~~~~~~~-~~~~~~g~~~v~-~~~ 184 (276)
T 3no2_A 117 ---E--TGIERPH-AQFRQINKNKKGNYLV-PLF--ATSEVREIAPN-GQLLNSVKLSGTPFS-SAFLDNGDCLVA-CGD 184 (276)
T ss_dssp ---C--CSCSSGG-GSCSCCEECTTSCEEE-EET--TTTEEEEECTT-SCEEEEEECSSCCCE-EEECTTSCEEEE-CBT
T ss_pred ---c--CCCCccc-ccccCceECCCCCEEE-Eec--CCCEEEEECCC-CCEEEEEECCCCccc-eeEcCCCCEEEE-eCC
Confidence 0 0000000 0133455788998554 332 34579999997 66554433 222222 344455555543 322
Q ss_pred CCCCCeEEEEeecccC
Q 005093 398 PVDVPQVKYGYFVDKA 413 (715)
Q Consensus 398 ~~~p~~l~~~~~~~~~ 413 (715)
..+|+.++..+++
T Consensus 185 ---~~~v~~~d~~tG~ 197 (276)
T 3no2_A 185 ---AHCFVQLNLESNR 197 (276)
T ss_dssp ---TSEEEEECTTTCC
T ss_pred ---CCeEEEEeCcCCc
Confidence 2458888866553
No 498
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.97 E-value=0.027 Score=53.83 Aligned_cols=175 Identities=13% Similarity=0.024 Sum_probs=95.3
Q ss_pred ceEEEEEccCCceEeecCCCCCCccceEEEecCCCCCccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhh
Q 005093 162 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 241 (715)
Q Consensus 162 ~~l~~~~~~~g~~~~l~~~~~~~~~~~~~~spdg~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (715)
.+|.++|+++|++..-. .+.. ...--.+++|++ |+...|. ...++++|.
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~~--~FgeGit~~g~~----Ly~ltw~--------------~~~v~V~D~---------- 123 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLGN--IFAEGLASDGER----LYQLTWT--------------EGLLFTWSG---------- 123 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECTT--CCEEEEEECSSC----EEEEESS--------------SCEEEEEET----------
T ss_pred CEEEEEECCCCcEEeEE-CCCC--cceeEEEEeCCE----EEEEEcc--------------CCEEEEEEC----------
Confidence 44999999999865531 1221 112235778888 7776642 247999997
Q ss_pred hhhccCCCCCCc-eecCCCCccccceeEcCCCCeEEEEecCCCCCCCCccccceeEeeecCCCCCCCcccceeeeeecee
Q 005093 242 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 320 (715)
Q Consensus 242 ~~~~~~~~~~~~-~~lt~~~~~~~~~~~spdg~~l~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~lt~~~~~~~~~~~ 320 (715)
++.+. .++.-. . ..-..++||++|+ .++.+ ..|+++|..+.+... .+++..
T Consensus 124 -------~Tl~~~~ti~~~-~--eGwGLt~Dg~~L~-vSdGs----------~~l~~iDp~T~~v~~-------~I~V~~ 175 (268)
T 3nok_A 124 -------MPPQRERTTRYS-G--EGWGLCYWNGKLV-RSDGG----------TMLTFHEPDGFALVG-------AVQVKL 175 (268)
T ss_dssp -------TTTEEEEEEECS-S--CCCCEEEETTEEE-EECSS----------SEEEEECTTTCCEEE-------EEECEE
T ss_pred -------CcCcEEEEEeCC-C--ceeEEecCCCEEE-EECCC----------CEEEEEcCCCCeEEE-------EEEeCC
Confidence 54443 333322 1 1234457898775 44432 369999977754311 011100
Q ss_pred cCCCCCccccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--------------CCceeEEEee
Q 005093 321 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLTL 386 (715)
Q Consensus 321 ~~~~~~~~g~~~~~~~~~~~~~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--------------~~~~~~~~s~ 386 (715)
. ...+ .....+.|. || .||... +. ...|.+||+++|++.....-. ......++++
T Consensus 176 ~--g~~v-----~~lNeLe~~-dG-~lyanv-w~-s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 176 R--GQPV-----ELINELECA-NG-VIYANI-WH-SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp T--TEEC-----CCEEEEEEE-TT-EEEEEE-TT-CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred C--Cccc-----ccccccEEe-CC-EEEEEE-CC-CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 0 0000 011234565 77 466443 32 358999999999987653321 1123356677
Q ss_pred cCCEEEEEEeCCCCCCeEEEEee
Q 005093 387 DGDNIIAVSSSPVDVPQVKYGYF 409 (715)
Q Consensus 387 ~~~~l~~~~~~~~~p~~l~~~~~ 409 (715)
++++|+.+.-.+ |.+|.+.+
T Consensus 245 ~~~rlfVTGK~W---p~~~ev~~ 264 (268)
T 3nok_A 245 GSGRIFMTGKLW---PRLFEVRL 264 (268)
T ss_dssp TTCCEEEEETTC---SEEEEEEE
T ss_pred CCCEEEEeCCCC---CceEEEEE
Confidence 777777765433 44655443
No 499
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.97 E-value=0.019 Score=60.31 Aligned_cols=160 Identities=15% Similarity=0.268 Sum_probs=93.5
Q ss_pred cccceEEeeCC-CCceEEEEecCCCCCCeEEEEe-cCCccEEEEecCccccccccCCCcccceeecCCCCeEEEEeecCC
Q 005093 42 MTGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 119 (715)
Q Consensus 42 ~~~~~~~~~Sp-dg~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wSpDg~~la~~~~~~~ 119 (715)
+.....++++| ++..|+++ +.+ ..++.+. .++....+....... ..++|+++|++|++.-...
T Consensus 136 ~~~P~~lavdp~~~g~Lyv~-d~~---~~I~~id~~~~~v~~~~~~~~~P----------~~ia~d~~G~~lyvad~~~- 200 (430)
T 3tc9_A 136 FGGAVWLSFDPKNHNHLYLV-GEQ---HPTRLIDFEKEYVSTVYSGLSKV----------RTICWTHEADSMIITNDQN- 200 (430)
T ss_dssp CSCCCEEEEETTEEEEEEEE-EBT---EEEEEEETTTTEEEEEECCCSCE----------EEEEECTTSSEEEEEECCS-
T ss_pred CCCCCEEEECCCCCCeEEEE-eCC---CcEEEEECCCCEEEEEecCCCCc----------ceEEEeCCCCEEEEEeCCC-
Confidence 44567889999 56666555 432 4677777 454554444321222 6899999999776643211
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCCCcccCCcCcccCCccCceEEEEEccCCce--EeecCCCCCCccceEEEecCCCC
Q 005093 120 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEG 197 (715)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g~~--~~l~~~~~~~~~~~~~~spdg~~ 197 (715)
+. ....+++++.+++-. +.+ . .-.....++++|++..
T Consensus 201 ---------------------------------~~-----~~~~v~~~~~~g~~~~~~~l--~-~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 201 ---------------------------------NN-----DRPNNYILTRESGFKVITEL--T-KGQNCNGAETHPINGE 239 (430)
T ss_dssp ---------------------------------CT-----TSEEEEEEEGGGTSCSEEEE--E-ECSSCCCEEECTTTCC
T ss_pred ---------------------------------Cc-----ccceEEEEeCCCceeeeeee--c-cCCCceEEEEeCCCCE
Confidence 00 113456666554332 222 1 1123456789996555
Q ss_pred CccEEEEEeecCccceeeeeeeecCCceEEEEecccccchhhhhhhhccCCCCCCceecCC--CCccccceeEcCCCCeE
Q 005093 198 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE--SISSAFFPRFSPDGKFL 275 (715)
Q Consensus 198 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~--~~~~~~~~~~spdg~~l 275 (715)
|+++.. ....|++++. .++....+.. .......++|+|||++|
T Consensus 240 ----lyv~d~--------------~~~~V~~~~~-----------------~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 240 ----LYFNSW--------------NAGQVFRYDF-----------------TTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp ----EEEEET--------------TTTEEEEEET-----------------TTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred ----EEEEEC--------------CCCEEEEEEC-----------------CCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 777642 2347999996 5554423321 12346679999999988
Q ss_pred EEEecCCCCCCCCccccceeEeeecCC
Q 005093 276 VFLSAKSSVDSGAHSATDSLHRIDWPT 302 (715)
Q Consensus 276 ~~~~~~~~~~~g~~~~~~~l~~~~~~~ 302 (715)
+++.... ..|++++.+.
T Consensus 285 yv~d~~~----------~~I~~~~~d~ 301 (430)
T 3tc9_A 285 YIVVVNQ----------HYILRSDYDW 301 (430)
T ss_dssp EEEETTT----------TEEEEEEEET
T ss_pred EEEECCC----------CEEEEEeCCc
Confidence 8776543 4588877654
No 500
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=96.82 E-value=0.0032 Score=61.41 Aligned_cols=112 Identities=12% Similarity=0.129 Sum_probs=70.8
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHhCCcEEEE-EcCCCCCCCch-hhhhcCCCCCCccc
Q 005093 463 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLI-VNYRGSLGFGE-EALQSLPGKVGSQD 540 (715)
Q Consensus 463 ~~l~~~l~~P~~~~~~~~~P~vv~iHGg~~~~~~~~~~~~~~~la~~G~~vi~-~d~rG~~~~g~-~~~~~~~~~~~~~~ 540 (715)
..+.++++.+. .+.-+||.+||.. . ..+.+.+.++.+.. .|.++.. ... -+... ....
T Consensus 61 ~~~~~~v~~~~-----~~~~iVva~RGT~------~---~~d~l~d~~~~~~~~~~~~~~~-~vh~Gf~~~-----~~~~ 120 (269)
T 1tib_A 61 GDVTGFLALDN-----TNKLIVLSFRGSR------S---IENWIGNLNFDLKEINDICSGC-RGHDGFTSS-----WRSV 120 (269)
T ss_dssp TTEEEEEEEET-----TTTEEEEEECCCS------C---THHHHTCCCCCEEECTTTSTTC-EEEHHHHHH-----HHHH
T ss_pred cCcEEEEEEEC-----CCCEEEEEEeCCC------C---HHHHHHhcCeeeeecCCCCCCC-EecHHHHHH-----HHHH
Confidence 45778888764 2457888999943 1 24667788888776 4555311 000 01000 0112
Q ss_pred hhhHHHHHHHHHHcCCCCCceEEEEEeChhHHHHHHHHhhCCC---ceeEEEecCCcch
Q 005093 541 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCN 596 (715)
Q Consensus 541 ~~d~~~~i~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~~~~~ 596 (715)
.+++.+.++.+.++. ...++.++||||||.+|..++..... .+.+....+|.+.
T Consensus 121 ~~~~~~~~~~~~~~~--~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~vg 177 (269)
T 1tib_A 121 ADTLRQKVEDAVREH--PDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVG 177 (269)
T ss_dssp HHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCCB
T ss_pred HHHHHHHHHHHHHHC--CCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCCC
Confidence 456777777776653 23589999999999999998876542 3777777777653
Done!