Query 005095
Match_columns 715
No_of_seqs 790 out of 4702
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:12:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 3.7E-53 1.3E-57 467.4 34.8 363 156-541 7-389 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 7.1E-51 2.4E-55 449.1 28.1 321 144-490 64-390 (437)
3 3utm_A Tankyrase-1; tankyrase, 100.0 1.8E-43 6E-48 377.2 30.2 284 157-486 18-322 (351)
4 4g8k_A 2-5A-dependent ribonucl 100.0 7E-44 2.4E-48 379.2 26.0 292 161-502 23-328 (337)
5 1wdy_A 2-5A-dependent ribonucl 100.0 2.6E-43 9E-48 364.2 29.6 266 162-468 4-281 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 1.5E-42 5.3E-47 369.9 20.0 307 195-547 21-331 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 4.5E-41 1.5E-45 347.4 27.5 249 196-491 3-267 (285)
8 3d9h_A CDNA FLJ77766, highly s 100.0 1.7E-41 5.7E-46 352.0 23.4 181 160-346 12-202 (285)
9 2xai_A ASB-9, ankyrin repeat a 100.0 5.5E-41 1.9E-45 343.4 23.9 124 198-325 3-126 (261)
10 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-41 3.9E-46 367.2 19.4 261 158-465 89-371 (373)
11 4g8k_A 2-5A-dependent ribonucl 100.0 2.3E-40 8E-45 352.0 28.2 275 142-468 40-329 (337)
12 2xai_A ASB-9, ankyrin repeat a 100.0 9.8E-41 3.3E-45 341.6 22.9 247 162-491 2-252 (261)
13 3d9h_A CDNA FLJ77766, highly s 100.0 5.6E-41 1.9E-45 348.0 20.4 246 195-488 12-266 (285)
14 2fo1_E LIN-12 protein; beta-ba 100.0 1.8E-41 6E-46 365.8 14.7 277 165-491 68-360 (373)
15 3ljn_A Hypothetical protein; a 100.0 9.8E-41 3.4E-45 358.8 18.1 254 195-489 17-301 (364)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 4.5E-40 1.5E-44 335.0 21.7 233 155-464 2-247 (253)
17 3ljn_A Hypothetical protein; a 100.0 3.4E-40 1.2E-44 354.7 15.6 267 155-467 12-316 (364)
18 3aji_A 26S proteasome non-ATPa 100.0 9E-39 3.1E-43 320.3 24.9 228 160-465 3-230 (231)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-39 4.6E-44 331.5 18.4 204 245-492 35-238 (253)
20 1oy3_D Transcription factor in 100.0 3.8E-39 1.3E-43 332.9 20.8 252 157-489 3-270 (282)
21 1k1a_A B-cell lymphoma 3-encod 100.0 4.6E-39 1.6E-43 324.3 20.3 164 158-325 4-175 (241)
22 3b7b_A Euchromatic histone-lys 100.0 7.2E-38 2.5E-42 315.0 23.5 215 194-489 7-222 (237)
23 1s70_B 130 kDa myosin-binding 100.0 3.6E-39 1.2E-43 336.4 13.4 265 169-487 4-275 (299)
24 1oy3_D Transcription factor in 100.0 2.2E-38 7.4E-43 327.2 18.8 262 194-542 5-271 (282)
25 1k1a_A B-cell lymphoma 3-encod 100.0 7.9E-38 2.7E-42 315.3 22.0 219 194-491 5-230 (241)
26 3b7b_A Euchromatic histone-lys 100.0 1.7E-37 5.8E-42 312.3 23.6 228 155-461 3-231 (237)
27 4b93_B Ankyrin repeat domain-c 100.0 1.2E-38 4.2E-43 327.0 14.7 232 157-465 5-244 (269)
28 2dzn_A Probable 26S proteasome 100.0 4.9E-37 1.7E-41 306.8 23.5 219 163-461 2-226 (228)
29 4b93_B Ankyrin repeat domain-c 100.0 8.2E-38 2.8E-42 320.9 17.8 215 194-489 7-230 (269)
30 3eu9_A Huntingtin-interacting 100.0 8.3E-37 2.8E-41 307.1 23.6 231 195-467 6-237 (240)
31 2dzn_A Probable 26S proteasome 100.0 1.3E-36 4.3E-41 303.9 23.3 211 198-487 2-218 (228)
32 3kea_A K1L; tropism, ANK repea 100.0 4.7E-37 1.6E-41 318.4 19.8 238 173-467 9-248 (285)
33 3aji_A 26S proteasome non-ATPa 100.0 2E-36 6.9E-41 303.1 23.2 215 195-489 3-217 (231)
34 2f8y_A Notch homolog 1, transl 100.0 2.6E-36 8.8E-41 300.6 20.8 217 174-467 2-218 (223)
35 1sw6_A Regulatory protein SWI6 100.0 7.2E-38 2.5E-42 331.2 9.3 205 237-488 101-327 (327)
36 3eu9_A Huntingtin-interacting 100.0 1.2E-34 4E-39 291.4 25.1 230 157-431 3-235 (240)
37 1s70_B 130 kDa myosin-binding 100.0 2.3E-35 7.9E-40 307.6 20.7 268 204-545 4-281 (299)
38 3kea_A K1L; tropism, ANK repea 100.0 1.2E-34 4E-39 300.4 21.2 210 210-468 12-223 (285)
39 2rfa_A Transient receptor pote 100.0 7.6E-34 2.6E-38 284.6 22.2 197 197-467 2-224 (232)
40 2f8y_A Notch homolog 1, transl 100.0 2.8E-34 9.6E-39 285.9 18.1 202 209-491 2-205 (223)
41 1sw6_A Regulatory protein SWI6 100.0 2.9E-35 9.8E-40 311.2 10.8 248 144-451 36-327 (327)
42 1ikn_D Protein (I-kappa-B-alph 100.0 3.2E-35 1.1E-39 295.7 10.1 217 195-487 5-229 (236)
43 1ikn_D Protein (I-kappa-B-alph 100.0 7.7E-35 2.6E-39 292.9 9.5 184 157-344 2-194 (236)
44 2rfa_A Transient receptor pote 100.0 5.6E-33 1.9E-37 278.3 22.6 181 162-346 2-209 (232)
45 3hra_A Ankyrin repeat family p 100.0 7.7E-33 2.6E-37 270.7 22.2 198 196-463 3-201 (201)
46 2etb_A Transient receptor pote 100.0 1.4E-33 4.7E-38 287.4 14.0 203 198-467 2-248 (256)
47 3hra_A Ankyrin repeat family p 100.0 6.8E-32 2.3E-36 264.0 21.8 181 161-346 3-190 (201)
48 2pnn_A Transient receptor pote 100.0 1.6E-32 5.6E-37 282.3 14.8 220 156-444 6-271 (273)
49 4gpm_A Engineered protein OR26 100.0 1.2E-31 4.3E-36 254.2 19.3 157 165-326 6-162 (169)
50 2pnn_A Transient receptor pote 100.0 2.1E-32 7.2E-37 281.5 13.7 229 194-482 9-272 (273)
51 4gpm_A Engineered protein OR26 100.0 4.1E-31 1.4E-35 250.6 19.5 94 201-297 7-100 (169)
52 2etb_A Transient receptor pote 100.0 7.2E-32 2.5E-36 274.7 14.8 181 162-346 1-233 (256)
53 3jxi_A Vanilloid receptor-rela 100.0 1.1E-31 3.7E-36 274.0 12.7 206 196-467 3-252 (260)
54 3v30_A DNA-binding protein rfx 100.0 1.6E-30 5.5E-35 247.7 16.9 170 163-337 2-171 (172)
55 3jxi_A Vanilloid receptor-rela 100.0 1.1E-30 3.7E-35 266.6 14.2 183 160-346 2-237 (260)
56 2aja_A Ankyrin repeat family p 100.0 4.8E-32 1.6E-36 289.8 0.3 269 157-492 86-364 (376)
57 2rfm_A Putative ankyrin repeat 100.0 1.5E-29 5E-34 245.8 16.7 163 156-323 28-190 (192)
58 3v31_A Ankyrin repeat family A 100.0 3.3E-29 1.1E-33 237.4 17.3 160 162-326 2-161 (167)
59 4hbd_A KN motif and ankyrin re 100.0 1.3E-29 4.5E-34 261.0 15.0 179 164-346 77-262 (276)
60 2aja_A Ankyrin repeat family p 100.0 1.1E-31 3.8E-36 287.0 -1.4 259 141-462 94-371 (376)
61 2vge_A RELA-associated inhibit 100.0 3.7E-31 1.3E-35 264.5 2.6 194 146-346 4-200 (229)
62 4hbd_A KN motif and ankyrin re 100.0 1.4E-29 4.8E-34 260.9 13.9 190 197-463 75-273 (276)
63 3twr_A Tankyrase-2; ankyrin re 100.0 2.4E-29 8.1E-34 237.9 13.7 161 159-324 4-164 (165)
64 3f6q_A Integrin-linked protein 100.0 5.9E-29 2E-33 238.6 15.2 167 162-333 4-170 (179)
65 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-28 3.8E-33 232.3 16.4 157 163-325 5-162 (162)
66 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.1E-28 7.1E-33 232.5 18.2 159 160-323 11-169 (169)
67 3v30_A DNA-binding protein rfx 100.0 1.3E-28 4.5E-33 234.5 16.8 168 199-480 3-171 (172)
68 1awc_B Protein (GA binding pro 100.0 2.2E-28 7.7E-33 228.1 17.5 151 163-319 2-152 (153)
69 2vge_A RELA-associated inhibit 100.0 9E-31 3.1E-35 261.8 0.1 199 215-493 2-204 (229)
70 2rfm_A Putative ankyrin repeat 100.0 2.7E-28 9.2E-33 236.8 17.6 149 194-346 31-179 (192)
71 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.7E-28 9.2E-33 228.2 16.8 154 163-322 2-155 (156)
72 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.9E-28 6.4E-33 230.8 15.8 145 196-344 3-147 (162)
73 3v31_A Ankyrin repeat family A 100.0 8.8E-28 3E-32 227.5 18.0 146 197-346 2-147 (167)
74 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.1E-27 1.1E-31 224.4 17.4 148 195-346 11-158 (169)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-28 4.6E-33 247.9 7.7 216 232-538 4-227 (239)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-28 7.5E-33 246.3 8.3 179 161-346 3-193 (239)
77 3f6q_A Integrin-linked protein 99.9 3.9E-27 1.3E-31 225.9 16.0 146 195-343 2-147 (179)
78 1awc_B Protein (GA binding pro 99.9 5.9E-27 2E-31 218.5 16.1 144 198-346 2-145 (153)
79 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-26 4.1E-31 216.9 15.5 144 198-346 2-145 (156)
80 3twr_A Tankyrase-2; ankyrin re 99.9 6.4E-27 2.2E-31 221.1 13.2 146 195-343 5-150 (165)
81 3t8k_A Uncharacterized protein 99.9 7.1E-27 2.4E-31 225.2 7.9 157 163-325 6-179 (186)
82 1d9s_A Cyclin-dependent kinase 99.9 6.6E-26 2.3E-30 206.9 11.6 126 195-324 9-135 (136)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 6.7E-26 2.3E-30 212.1 10.5 141 159-305 8-149 (156)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 8.1E-26 2.8E-30 211.5 11.0 144 195-343 9-153 (156)
85 1d9s_A Cyclin-dependent kinase 99.9 1.9E-25 6.5E-30 203.8 11.5 132 155-292 4-136 (136)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4E-24 1.4E-28 191.5 15.3 124 163-291 2-125 (126)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-24 6.1E-29 197.4 13.2 126 195-323 11-136 (136)
88 3t8k_A Uncharacterized protein 99.9 1.9E-24 6.4E-29 208.2 11.5 143 198-346 6-166 (186)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-23 4.6E-28 188.1 15.5 126 197-325 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-23 3.4E-28 192.4 13.6 127 159-290 10-136 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 5.3E-24 1.8E-28 194.4 7.6 126 195-323 7-132 (137)
92 3deo_A Signal recognition part 99.9 1E-24 3.4E-29 209.9 2.6 112 230-344 41-153 (183)
93 3ui2_A Signal recognition part 99.9 7.6E-25 2.6E-29 221.1 1.9 110 231-343 43-153 (244)
94 3deo_A Signal recognition part 99.9 6.6E-23 2.3E-27 197.2 12.2 140 160-322 41-181 (183)
95 2b0o_E UPLC1; arfgap, structur 99.9 8.5E-23 2.9E-27 212.4 13.3 139 198-346 151-298 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 4.5E-23 1.5E-27 184.4 9.4 111 195-308 4-114 (123)
97 3ui2_A Signal recognition part 99.9 9.1E-23 3.1E-27 205.8 12.4 142 161-325 43-185 (244)
98 3ehr_A Osteoclast-stimulating 99.9 4.8E-23 1.6E-27 204.6 8.4 129 195-326 70-199 (222)
99 2b0o_E UPLC1; arfgap, structur 99.9 2.3E-22 8E-27 209.1 11.6 141 163-313 151-299 (301)
100 3c5r_A BARD-1, BRCA1-associate 99.9 4.7E-22 1.6E-26 181.4 11.5 120 223-345 1-120 (137)
101 3ehr_A Osteoclast-stimulating 99.9 9E-23 3.1E-27 202.6 7.2 140 156-300 66-206 (222)
102 3aaa_C Myotrophin, protein V-1 99.9 5.8E-22 2E-26 177.2 10.1 118 160-282 4-121 (123)
103 1dcq_A PYK2-associated protein 99.8 1.6E-20 5.4E-25 193.0 17.7 164 159-325 62-263 (278)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.2E-21 2.5E-25 160.9 11.9 93 197-292 1-93 (93)
105 3jue_A Arfgap with coiled-coil 99.8 1.1E-20 3.7E-25 201.1 12.8 147 195-344 196-347 (368)
106 3lvq_E ARF-GAP with SH3 domain 99.8 2.5E-20 8.4E-25 208.1 14.5 135 199-343 133-276 (497)
107 1dcq_A PYK2-associated protein 99.8 3.6E-20 1.2E-24 190.3 14.4 127 163-292 130-263 (278)
108 3jue_A Arfgap with coiled-coil 99.8 3.3E-20 1.1E-24 197.4 13.5 147 158-309 194-346 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-20 3.9E-25 166.5 8.2 107 194-303 5-111 (115)
110 3lvq_E ARF-GAP with SH3 domain 99.8 4E-20 1.4E-24 206.3 14.0 134 165-308 134-275 (497)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.5E-20 2.6E-24 154.6 11.6 93 232-325 1-93 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 1.6E-19 5.3E-24 159.2 8.7 109 228-338 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.9E-17 6.3E-22 144.6 9.9 89 195-286 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 5.3E-17 1.8E-21 141.7 10.1 94 225-319 16-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 28.3 96 0.0033 31.4 6.9 60 160-219 70-130 (351)
116 4dve_A Biotin transporter BIOY 24.3 4.1E+02 0.014 24.3 12.2 22 558-579 23-44 (198)
117 4hkr_A Calcium release-activat 21.2 4.8E+02 0.016 23.9 12.9 22 680-701 155-177 (214)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-53 Score=467.36 Aligned_cols=363 Identities=19% Similarity=0.198 Sum_probs=187.1
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCh
Q 005095 156 VERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNT 235 (715)
Q Consensus 156 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~T 235 (715)
++..+..|+||||+||..|+.++|++|++.+.+ ++.. +..|.||||+|+..|+.++|++|++ .|++++.+|.+|+|
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t 82 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGAS-PNVS-NVKVETPLHMAARAGHTEVAKYLLQ--NKAKVNAKAKDDQT 82 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTTCC-SCCS-SSCCCCHHHHHHHHTCHHHHHHHHH--HTCCSSCCCTTSCC
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCC-CCCCCCHHHHHHHcCCHHHHHHHHh--CCCCCCCCCCCCCC
Confidence 344445555555555555555555555544322 2222 4455555555555555555555555 45555555555555
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhH
Q 005095 236 ALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDV 315 (715)
Q Consensus 236 pLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~i 315 (715)
|||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|++++++.+..+..|.||||.|+..|+.++
T Consensus 83 ~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 161 (437)
T 1n11_A 83 PLHCAARIGHTNMVKLLLENNANPN-LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV 161 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence 5555555555555555555555543 445555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCC--cchhccCCchhHHHHH----HHHHHHHH
Q 005095 316 ALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVP--GMRAILDPKLMHLQAL----ELVKRLWE 389 (715)
Q Consensus 316 v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~--~~~~~~~~~~lh~a~~----~~~~~l~~ 389 (715)
+++|++++++. +..+..|.||||+|+..++ .++++.|+.... +..+..+.||+|.|+. ++++.|++
T Consensus 162 v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~-------~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 233 (437)
T 1n11_A 162 AELLLERDAHP-NAAGKNGLTPLHVAVHHNN-------LDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233 (437)
T ss_dssp HHHHHHTTCCT-TCCCSSCCCHHHHHHHTTC-------HHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhCCCCC-CCCCCCCCCHHHHHHHcCC-------HHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 55555555543 4445555555555555443 445555543322 2233344555555542 34444433
Q ss_pred HHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhh
Q 005095 390 QVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLI 469 (715)
Q Consensus 390 ~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l 469 (715)
. +.+++..+..|.||||+|+..|+.+++++|++++++ .+.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 234 ~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-- 305 (437)
T 1n11_A 234 Y-----GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD-- 305 (437)
T ss_dssp T-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT--
T ss_pred c-----CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC--
Confidence 2 333444444555555555555555555555555555 44445555555555555555555555555555544
Q ss_pred hcccCCCCchHHHHhhhhCCCCc--cccCCCc-----------hhhhHHHhhhHHHHHHhhc-chhHhhhhcCCCCchhh
Q 005095 470 ASYKDENNNNMLHLAGKLAPPDR--LKIDSGA-----------ALQLRRELHWFKEIEKVVQ-PSYREAKNSEGRTPHIL 535 (715)
Q Consensus 470 ~~~~d~~G~TpLh~A~~~~~~~~--l~l~~ga-----------~~~~~~~l~~~~~v~~ll~-~~~~~~~n~~G~Tpl~~ 535 (715)
.+|..|+||||+|+..|+.+. ++++.|+ +++.....+..+.++.+++ +++++.+|.+|+||+++
T Consensus 306 --~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~ 383 (437)
T 1n11_A 306 --ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAI 383 (437)
T ss_dssp --CCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHH
T ss_pred --CCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHH
Confidence 245555555555555554442 2222222 2222223333556666665 66788999999999999
Q ss_pred hHHHhh
Q 005095 536 FSEEHR 541 (715)
Q Consensus 536 a~~~~~ 541 (715)
|.+...
T Consensus 384 A~~~g~ 389 (437)
T 1n11_A 384 AKRLGY 389 (437)
T ss_dssp HHHTTC
T ss_pred HHHcCc
Confidence 987653
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-51 Score=449.13 Aligned_cols=321 Identities=21% Similarity=0.207 Sum_probs=290.4
Q ss_pred ccccCCCCCCcccccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 005095 144 VSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTP 223 (715)
Q Consensus 144 ~~l~~~G~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g 223 (715)
.++.+.|+ +++..+.+|+||||+|+..|+.+++++|++.+.+ ++. .+..|.||||+|+..|+.++|++|++ .+
T Consensus 64 ~~Ll~~g~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~ 136 (437)
T 1n11_A 64 KYLLQNKA---KVNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN-PNL-ATTAGHTPLHIAAREGHVETVLALLE--KE 136 (437)
T ss_dssp HHHHHHTC---CSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTC-CCTTCCCHHHHHHHHTCHHHHHHHHH--TT
T ss_pred HHHHhCCC---CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCC-CCC-CCCCCCcHHHHHHHcCCHHHHHHHHh--CC
Confidence 33455555 5677888999999999999999999999988654 344 38899999999999999999999999 89
Q ss_pred cccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccH
Q 005095 224 EDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIEL 303 (715)
Q Consensus 224 ~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 303 (715)
++++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+.+|.||
T Consensus 137 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 215 (437)
T 1n11_A 137 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN-AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 215 (437)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCH
T ss_pred CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 9999999999999999999999999999999999986 789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCC--cchhccCCchhHHHHH
Q 005095 304 LVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVP--GMRAILDPKLMHLQAL 381 (715)
Q Consensus 304 L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~--~~~~~~~~~~lh~a~~ 381 (715)
||.|+..|+.+++++|++.+++. +..+..|.||||+|+..|+ .++++.|+.... +..+..|.||+|.|+.
T Consensus 216 L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~-------~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 287 (437)
T 1n11_A 216 LHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGH-------AEMVALLLSKQANGNLGNKSGLTPLHLVAQ 287 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC-------HHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCC-------HHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999985 7889999999999999875 789999986654 5667889999999984
Q ss_pred ----HHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHH
Q 005095 382 ----ELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFN 457 (715)
Q Consensus 382 ----~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~ 457 (715)
++++.|+++ +.+++..+..|.||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+.+|+.++++
T Consensus 288 ~~~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 288 EGHVPVADVLIKH-----GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp HTCHHHHHHHHHH-----TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHhC-----CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHH
Confidence 677777766 667788889999999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHcCcchhhhhcccCCCCchHHHHhhhhCCC
Q 005095 458 LIYELGAHKDLIASYKDENNNNMLHLAGKLAPP 490 (715)
Q Consensus 458 ~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~ 490 (715)
+|+++|++++. +|.+|+||||+|++.|+.
T Consensus 362 ~Ll~~ga~~~~----~~~~g~t~l~~A~~~g~~ 390 (437)
T 1n11_A 362 LLLKNGASPNE----VSSDGTTPLAIAKRLGYI 390 (437)
T ss_dssp HHHHTTCCSCC----CCSSSCCHHHHHHHTTCH
T ss_pred HHHHCcCCCCC----CCCCCCCHHHHHHHcCcH
Confidence 99999999984 999999999999998874
No 3
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.8e-43 Score=377.24 Aligned_cols=284 Identities=17% Similarity=0.110 Sum_probs=242.8
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChH
Q 005095 157 ERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTA 236 (715)
Q Consensus 157 ~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~Tp 236 (715)
+..+..|.|+||.||..|+.+.++.|+...+.+++.. |..|.||||+|+..|+.++|++|++ .|++++.+|..|.||
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~ 94 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQ--HGADVHAKDKGGLVP 94 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCH
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCccCCCCCcH
Confidence 3345567799999999999999999998877766665 8999999999999999999999999 899999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHH--------
Q 005095 237 LCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVI-------- 308 (715)
Q Consensus 237 Lh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~-------- 308 (715)
||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++..+..|.+|++.|+
T Consensus 95 L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~ 173 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHH
Confidence 999999999999999999999986 78999999999999999999999999999999999999999987754
Q ss_pred -------------HcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCch
Q 005095 309 -------------DAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKL 375 (715)
Q Consensus 309 -------------~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 375 (715)
..+..+.++.++...... ...+..|.||||+|+..++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~t~L~~A~~~~~~~--------------------------- 225 (351)
T 3utm_A 174 TYEFKGHSLLQAAREADLAKVKKTLALEIIN-FKQPQSHETALHCAVASLHPK--------------------------- 225 (351)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT-CCCTTTCCCHHHHHHHCCSTT---------------------------
T ss_pred HhhhcccHHHHHHHhccHHHHHHHHHhhccc-ccCCCCCCCHHHHHHHHhCcc---------------------------
Confidence 455566666666655443 455677888888888775310
Q ss_pred hHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHH
Q 005095 376 MHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKI 455 (715)
Q Consensus 376 lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~i 455 (715)
..++++.|++. +.+++.++..|.||||+|++.|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++
T Consensus 226 ----~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~ 295 (351)
T 3utm_A 226 ----RKQVAELLLRK-----GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQT 295 (351)
T ss_dssp ----HHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred ----HHHHHHHHHHc-----CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHH
Confidence 02555666554 667778888899999999999999999999999998 78889999999999999999999
Q ss_pred HHHHHHcCcchhhhhcccCCCCchHHHHhhh
Q 005095 456 FNLIYELGAHKDLIASYKDENNNNMLHLAGK 486 (715)
Q Consensus 456 v~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~ 486 (715)
+++|+++|++++. +|..|+||+|+|..
T Consensus 296 v~~Ll~~gad~~~----~~~~g~tal~~a~~ 322 (351)
T 3utm_A 296 CRLLLSYGSDPSI----ISLQGFTAAQMGNE 322 (351)
T ss_dssp HHHHHHTTCCTTC----CCTTSCCHHHHSCH
T ss_pred HHHHHHcCCCCCC----cCCCCCChhhhhhH
Confidence 9999999999884 89999999999843
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7e-44 Score=379.20 Aligned_cols=292 Identities=20% Similarity=0.237 Sum_probs=249.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHH
Q 005095 161 FTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFA 240 (715)
Q Consensus 161 ~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~A 240 (715)
.+|.||||.|++.|+.++|++||+.+. +++.+.+..|+||||+||..|+.++|++||+ +|++++.++..+.+|++.+
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Ga-dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~--~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLR--HGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCcCHHHHHHHcCCHHHHHHHHH--cCCchhhhccCCCchhHHH
Confidence 346799999999999999999998865 4555534569999999999999999999999 8999999999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcc----------ccccccHHHHHHHc
Q 005095 241 AVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLK----------EEDRIELLVAVIDA 310 (715)
Q Consensus 241 a~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~----------~~~g~t~L~~A~~~ 310 (715)
+..+..++++.+++.+++++ .+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred HhcccchhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 99999999999999999986 79999999999999999999999999999988754 44689999999999
Q ss_pred CChhHHHHHHhh-CcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHH
Q 005095 311 GLYDVALDLIQH-HPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWE 389 (715)
Q Consensus 311 g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~ 389 (715)
|+.+++++|+++ |+++ +.+|..|.||||.++..+... . ..++++.|++
T Consensus 179 g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~---~---------------------------~~~i~~lLl~ 227 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDS---D---------------------------VEAITHLLLD 227 (337)
T ss_dssp TCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTT---T---------------------------HHHHHHHHHH
T ss_pred CCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcc---c---------------------------HHHHHHHHHH
Confidence 999999999975 6664 899999999999988654310 0 0134455554
Q ss_pred HHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHh-CCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhh
Q 005095 390 QVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQM-YPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDL 468 (715)
Q Consensus 390 ~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~-~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~ 468 (715)
+ +++++.++..|.||||+|++.|+.++++.|++. +++ ++.+|.+|+||||+|+++|+.++|++|+++|++++.
T Consensus 228 ~-----gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~-vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 228 H-----GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp T-----TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred C-----CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 4 677888888999999999999999999999986 566 888999999999999999999999999999988762
Q ss_pred hhcccCCCCchHHHHhhhhCCCC--ccccCCCchhh
Q 005095 469 IASYKDENNNNMLHLAGKLAPPD--RLKIDSGAALQ 502 (715)
Q Consensus 469 l~~~~d~~G~TpLh~A~~~~~~~--~l~l~~ga~~~ 502 (715)
.||||+|++.|+.+ ++++++||+++
T Consensus 302 ---------~~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 302 ---------GDLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp ---------CCHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred ---------CCHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 35999999998765 34555666543
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-43 Score=364.19 Aligned_cols=266 Identities=21% Similarity=0.240 Sum_probs=241.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHH
Q 005095 162 TSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA 241 (715)
Q Consensus 162 ~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa 241 (715)
+|.||||.|+..|+.+++++|++.+.. ++...+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLR--HGADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHH--cCCCCcccCCCCCCHHHHHH
Confidence 477999999999999999999987654 444447889999999999999999999999 89999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcc----------ccccccHHHHHHHcC
Q 005095 242 VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLK----------EEDRIELLVAVIDAG 311 (715)
Q Consensus 242 ~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~----------~~~g~t~L~~A~~~g 311 (715)
..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||.|+..|
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 159 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcC
Confidence 9999999999999999986 78999999999999999999999999999999887 778999999999999
Q ss_pred ChhHHHHHHhh-CcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHH
Q 005095 312 LYDVALDLIQH-HPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQ 390 (715)
Q Consensus 312 ~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~ 390 (715)
+.+++++|++. +.++ +.+|..|+||||+|+..++... ..++++.|++.
T Consensus 160 ~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~------------------------------~~~i~~~Ll~~ 208 (285)
T 1wdy_A 160 HVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSD------------------------------VEAITHLLLDH 208 (285)
T ss_dssp CHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTT------------------------------HHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccch------------------------------HHHHHHHHHHc
Confidence 99999999998 6664 8899999999999999875210 12556666654
Q ss_pred HHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHH-hCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhh
Q 005095 391 VLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQ-MYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDL 468 (715)
Q Consensus 391 ~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~-~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~ 468 (715)
+.+++.++..|.||||+|++.|+.+++++|++ .|++ ++.+|..|+||||+|++.|+.+++++|+++|++++.
T Consensus 209 -----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 209 -----GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp -----TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred -----CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 67788888999999999999999999999999 7888 889999999999999999999999999999999884
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.5e-42 Score=369.94 Aligned_cols=307 Identities=15% Similarity=0.095 Sum_probs=254.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
+..+.|+||.||+.|+.+.|+.|+.. .+.+++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 98 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH-AKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCcHHHHH
Confidence 56788999999999999999999985 689999999999999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcch
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQL 354 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 354 (715)
+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++++. +..+..|.||+++|+..+. .
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~-------~ 170 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPEL-------R 170 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHH-------H
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhh-------H
Confidence 9999999999999999999999999999999999999999999999999985 7889999999999886532 2
Q ss_pred hhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHc---CCHHHHHHHHHhCCC
Q 005095 355 GFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVEL---GNVEFLMVLIQMYPN 431 (715)
Q Consensus 355 ~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~---g~~eiv~~Ll~~~~d 431 (715)
+.+..... ..++..++.......+...+... ......+..|.||||+|+.. +..+++++|+++|++
T Consensus 171 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~ 239 (351)
T 3utm_A 171 ERLTYEFK----------GHSLLQAAREADLAKVKKTLALE-IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN 239 (351)
T ss_dssp HHHHHHHH----------HHHHHHHHHTTCHHHHHHHTTTC-CTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC
T ss_pred HHHHhhhc----------ccHHHHHHHhccHHHHHHHHHhh-cccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC
Confidence 22222111 11222222211111122222222 22233567889999999999 568999999999999
Q ss_pred CccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCCCCccccCCCchhhhHHHhhhHH
Q 005095 432 LIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFK 511 (715)
Q Consensus 432 ~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~~l~l~~ga~~~~~~~l~~~~ 511 (715)
++.+|..|+||||+|+.+|+.+++++|+++|++++. +|..|+||||+|++.|+.+
T Consensus 240 -~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~----~d~~g~t~L~~A~~~~~~~-------------------- 294 (351)
T 3utm_A 240 -VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA----LDSLGQTALHRAALAGHLQ-------------------- 294 (351)
T ss_dssp -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----CCTTSCCHHHHHHHHTCHH--------------------
T ss_pred -cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----cCCCCCCHHHHHHHcCcHH--------------------
Confidence 789999999999999999999999999999999984 9999999999999998743
Q ss_pred HHHHhhc-chhHhhhhcCCCCchhhhHHHhhHhhhhh
Q 005095 512 EIEKVVQ-PSYREAKNSEGRTPHILFSEEHRRLVREG 547 (715)
Q Consensus 512 ~v~~ll~-~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~ 547 (715)
.++.+++ +++++.+|.+|+||+++|.+...+.+.+.
T Consensus 295 ~v~~Ll~~gad~~~~~~~g~tal~~a~~~~~~~l~~~ 331 (351)
T 3utm_A 295 TCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSES 331 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHSCHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCcCCCCCChhhhhhHHHHHHHHhc
Confidence 4445554 56779999999999999977766555443
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-41 Score=347.40 Aligned_cols=249 Identities=17% Similarity=0.178 Sum_probs=229.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc-cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 196 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALR-NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 196 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~-d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
.+|.||||.|++.|+.++|++|++ .|++++.+ +..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 79 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLE--GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-LRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHH--cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHH
Confidence 357899999999999999999999 89999988 7889999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceec----------CCCCCCHHHHHHhC
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMAR----------DGNGETALHVLARK 344 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~----------d~~g~tpLh~A~~~ 344 (715)
+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++++++. +.. +..|.||||+|+..
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999886 444 78899999999998
Q ss_pred CCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCC----HH
Q 005095 345 PSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGN----VE 420 (715)
Q Consensus 345 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~----~e 420 (715)
|+ .+++++|++. .+.+++..+..|.||||+|+..|+ .+
T Consensus 159 ~~----------------------------------~~~v~~Ll~~----~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 200 (285)
T 1wdy_A 159 GH----------------------------------VEVLKILLDE----MGADVNACDNMGRNALIHALLSSDDSDVEA 200 (285)
T ss_dssp TC----------------------------------HHHHHHHHHT----SCCCTTCCCTTSCCHHHHHHHCSCTTTHHH
T ss_pred CC----------------------------------HHHHHHHHHh----cCCCCCccCCCCCCHHHHHHHccccchHHH
Confidence 76 3666666553 366778888999999999999999 99
Q ss_pred HHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHH-cCcchhhhhcccCCCCchHHHHhhhhCCCC
Q 005095 421 FLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYE-LGAHKDLIASYKDENNNNMLHLAGKLAPPD 491 (715)
Q Consensus 421 iv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~-~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~ 491 (715)
++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++. +|..|+||||+|++.++.+
T Consensus 201 i~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~----~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 201 ITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND----TDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp HHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTC----CCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccc----cCCCCCcHHHHHHHcCcHH
Confidence 99999999999 78999999999999999999999999999 8999884 9999999999999998754
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=351.95 Aligned_cols=181 Identities=13% Similarity=0.065 Sum_probs=134.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhCcc----------chhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFNLNPE----------AVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALR 229 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~----------~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~ 229 (715)
...|.|+||+|+..|+.+.+..++...+. ..+ ..|.+|+||||+||..|+.++|++|++ .|++++.+
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~g~t~L~~Aa~~g~~~~v~~Ll~--~g~~~~~~ 88 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLM-GDAVSDWSPMHEAAIHGHQLSLRNLIS--QGWAVNII 88 (285)
T ss_dssp ------------------------------CCSEECCCCTTC-SSSCCSCCHHHHHHHTTCHHHHHHHHH--TTCCSCEE
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCccc-CCCccCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCc
Confidence 34588999999999998888776654322 222 348899999999999999999999999 89999999
Q ss_pred cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHH
Q 005095 230 NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVID 309 (715)
Q Consensus 230 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~ 309 (715)
|.+|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++..+ +|.||||+|+.
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~ 166 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAAR 166 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHH
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHH
Confidence 9999999999999999999999999999986 789999999999999999999999999999988654 49999999999
Q ss_pred cCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 310 AGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 310 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
.|+.+++++|++.++++ +.+|.+|+||||+|+..++
T Consensus 167 ~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 167 RGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTC
T ss_pred cCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 99999999999998875 6666666666666665543
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=343.41 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=61.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Q 005095 198 QDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL 277 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~ 277 (715)
|+||||+||..|+.++|++|++ .|++++.+|.+|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLIS--QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVS 79 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHH--TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHc
Confidence 4455555555555555555555 455555555555555555555555555555555555443 4445555555555555
Q ss_pred CCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcc
Q 005095 278 GHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQ 325 (715)
Q Consensus 278 g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~ 325 (715)
|+.+++++|+++|++++. +.+|.||||.|+..|+.+++++|++++++
T Consensus 80 ~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 126 (261)
T 2xai_A 80 GSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN 126 (261)
T ss_dssp TCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 555555555555554442 22344455555555555555555444443
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-41 Score=367.23 Aligned_cols=261 Identities=18% Similarity=0.180 Sum_probs=218.1
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHH--------hcCCCcccccc
Q 005095 158 RNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELV--------NLMTPEDLALR 229 (715)
Q Consensus 158 ~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll--------~~~~g~~i~~~ 229 (715)
..+..|+||||.||..|+ +++++|+.. .++...+..|+||||+||..|+.++|++|+ + .|+++|.+
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~~---~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~--~ga~vn~~ 162 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITRE---SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA--AGADVNAM 162 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCSTT---TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHH--TCCCTTCC
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhccc---cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHh--cCCCCcCC
Confidence 457789999999999665 788877643 344442378999999999999998888887 6 89999999
Q ss_pred cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCCCccccccccHHHH
Q 005095 230 NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVT---KEEDLKEEDRIELLVA 306 (715)
Q Consensus 230 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~g---a~~~~~~~~g~t~L~~ 306 (715)
|..|.||||+|+..|+.++|++|+++|++++ .+|..|.||||+|+..|+.+++++|++++ ++++..+..|.||||+
T Consensus 163 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~ 241 (373)
T 2fo1_E 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241 (373)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHH
Confidence 9999999999999999999999999999986 78999999999999999999999999998 8999999999999999
Q ss_pred HHHcC---ChhHHHHHHhhCccccee--------cCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCch
Q 005095 307 VIDAG---LYDVALDLIQHHPQLAMA--------RDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKL 375 (715)
Q Consensus 307 A~~~g---~~~iv~~Ll~~~~~~~~~--------~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 375 (715)
|+..+ +.+++++|+++++++ +. .|..|+||||+|+..|+
T Consensus 242 A~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~d~~g~t~Lh~A~~~g~----------------------------- 291 (373)
T 2fo1_E 242 VAHNEGRDQVASAKLLVEKGAKV-DYDGAARKDSEKYKGRTALHYAAQVSN----------------------------- 291 (373)
T ss_dssp HHHSCSTTHHHHHHHHHHHTCCS-SCCSGGGTSSSSCCCCCTHHHHHSSCC-----------------------------
T ss_pred HHHhCCcchHHHHHHHHHCCCCc-ccccccccCcccccCCCHHHHHHHhCC-----------------------------
Confidence 99998 899999999999886 33 56678888888888776
Q ss_pred hHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHH
Q 005095 376 MHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKI 455 (715)
Q Consensus 376 lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~i 455 (715)
.+++++|++.. +.+++.+|..|.||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+.+|+.++
T Consensus 292 -----~~~v~~Ll~~~----~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 292 -----MPIVKYLVGEK----GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp -----HHHHHHHHHHS----CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHH
T ss_pred -----HHHHHHHHHhc----CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHH
Confidence 36666666542 366777778888888888888888888888888888 67778888888888888888888
Q ss_pred HHHHHHcCcc
Q 005095 456 FNLIYELGAH 465 (715)
Q Consensus 456 v~~Ll~~ga~ 465 (715)
+++|++++++
T Consensus 362 v~~Ll~~~a~ 371 (373)
T 2fo1_E 362 VDIFDRCRPE 371 (373)
T ss_dssp HHHHHTTC--
T ss_pred HHHHHhcCcc
Confidence 8888887765
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.3e-40 Score=351.97 Aligned_cols=275 Identities=21% Similarity=0.215 Sum_probs=237.3
Q ss_pred ccccccCCCCCCcccccCC-CCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 005095 142 PAVSLSQPGAVSGGVERNC-FTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNL 220 (715)
Q Consensus 142 ~~~~l~~~G~~~~~~~~~~-~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ 220 (715)
.+..+++.|+ ++|..+ ..|+||||+||..|+.++|++||+.+.. ++.+ +..+.+|+|.++..++.+++..+++
T Consensus 40 ~V~~LL~~Ga---dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 113 (337)
T 4g8k_A 40 LVQQLLEGGA---NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLR-KKNGATPFILAAIAGSVKLLKLFLS- 113 (337)
T ss_dssp HHHHHHHHTC---CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCC-CTTCCCHHHHHHHHTCHHHHHHHHT-
T ss_pred HHHHHHHCCC---CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhh-ccCCCchhHHHHhcccchhhHHhhh-
Confidence 3444666676 455554 4589999999999999999999987654 4443 8999999999999999999999999
Q ss_pred CCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCc---------cCCCCCCCHHHHHHHcCCHHHHHHHHh-cC
Q 005095 221 MTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPS---------IRGNKGATPLCMAALLGHKEMIWYLYS-VT 290 (715)
Q Consensus 221 ~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~---------~~d~~g~tpLh~A~~~g~~~iv~~Ll~-~g 290 (715)
.+++++.+|..|.||||+|+..|+.+++++|+++|++++. ..+..|.||||+|+..|+.++|++|++ .|
T Consensus 114 -~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 114 -KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp -TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSC
T ss_pred -ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Confidence 8999999999999999999999999999999999998752 235579999999999999999999996 59
Q ss_pred CCCCccccccccHHHHHHHcCC----hhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCc
Q 005095 291 KEEDLKEEDRIELLVAVIDAGL----YDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPG 366 (715)
Q Consensus 291 a~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~ 366 (715)
++++.++..|.|+++.++..+. .+++++|+++|+++ +.+|.+|+||||+|+..++
T Consensus 193 ad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~-------------------- 251 (337)
T 4g8k_A 193 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKH-------------------- 251 (337)
T ss_dssp CCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTC--------------------
T ss_pred CCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhh--------------------
Confidence 9999999999999998876554 35889999999996 8899999999999999986
Q ss_pred chhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHH
Q 005095 367 MRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHI 446 (715)
Q Consensus 367 ~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~ 446 (715)
.+.++.|++ ..+.+++.+|..|.||||+|++.|+.++|++|+++|++ ++ +.||||+
T Consensus 252 --------------~~~v~~Ll~----~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-~n-----~~~~L~~ 307 (337)
T 4g8k_A 252 --------------LGLVQRLLE----QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS-TD-----CGDLVMT 307 (337)
T ss_dssp --------------HHHHHHHHT----STTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS-ST-----TCCHHHH
T ss_pred --------------hHHHHHHHH----hcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC-----CCCHHHH
Confidence 245554443 34778899999999999999999999999999999998 43 4579999
Q ss_pred HHHhCCHHHHHHHHHcCcchhh
Q 005095 447 AVVHRQEKIFNLIYELGAHKDL 468 (715)
Q Consensus 447 A~~~~~~~iv~~Ll~~ga~~~~ 468 (715)
|+++|+.++|++|+++||++|+
T Consensus 308 A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 308 ARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HHHTTCHHHHHHHHHTTCCC--
T ss_pred HHHcCCHHHHHHHHHCcCCCCC
Confidence 9999999999999999999986
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=341.58 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=216.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHH
Q 005095 162 TSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA 241 (715)
Q Consensus 162 ~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa 241 (715)
+|+||||+||..|+.+++++|++.+. +++.. |.+|.||||+|+..|+.++|++|++ .|++++.+|..|.||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW-AVNII-TADHVSPLHEACLGGHLSCVKILLK--HGAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC-CSSCC-CTTCCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCCCCCCCCHHHHHH
Confidence 58899999999999999999998754 44544 8899999999999999999999999 89999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHh
Q 005095 242 VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQ 321 (715)
Q Consensus 242 ~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 321 (715)
..|+.+++++|+++|++++ .+.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999985 45679999999999999999999999999999999999999999999999999999999
Q ss_pred hCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccc
Q 005095 322 HHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGE 401 (715)
Q Consensus 322 ~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~ 401 (715)
+|+++ +. +.
T Consensus 156 ~g~~~-~~-~~--------------------------------------------------------------------- 164 (261)
T 2xai_A 156 SGADV-NQ-GK--------------------------------------------------------------------- 164 (261)
T ss_dssp HTCCT-TC-CB---------------------------------------------------------------------
T ss_pred cCCCC-CC-CC---------------------------------------------------------------------
Confidence 98875 21 22
Q ss_pred cccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhh----hhcccCCCC
Q 005095 402 LLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDL----IASYKDENN 477 (715)
Q Consensus 402 ~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~----l~~~~d~~G 477 (715)
.|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+.++ +++++|++++....+ -.+.+|..|
T Consensus 165 ---~g~t~Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g 238 (261)
T 2xai_A 165 ---GQDSPLHAVARTASEELACLLMDFGAD-TQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFG 238 (261)
T ss_dssp ---TTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSC
T ss_pred ---CCCChHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhc
Confidence 456677777777889999999999999 8899999999999999655 589999998765421 123489999
Q ss_pred chHHHHhhhhCCCC
Q 005095 478 NNMLHLAGKLAPPD 491 (715)
Q Consensus 478 ~TpLh~A~~~~~~~ 491 (715)
+||||+|++...++
T Consensus 239 ~t~l~~~~~~~~p~ 252 (261)
T 2xai_A 239 IQQHHKITKLVLPE 252 (261)
T ss_dssp TTCGGGGGGSSSCH
T ss_pred hhccccCcccCCcH
Confidence 99999999876543
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=348.01 Aligned_cols=246 Identities=17% Similarity=0.147 Sum_probs=199.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcC---------CCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCC
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLM---------TPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGN 265 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~---------~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~ 265 (715)
...|.|+||+|+..|+.+.+..++... ....++.+|..|+||||+|+..|+.+++++|+++|++++ .+|.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~-~~~~ 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN-IITA 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC-EECT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCC
Confidence 468999999999999987777765521 123367789999999999999999999999999999986 7999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCC
Q 005095 266 KGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKP 345 (715)
Q Consensus 266 ~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~ 345 (715)
.|.||||+|+..|+.+++++|+++|++++.++.+|.||||+|+..|+.+++++|++.+++. + .+.+|.||||+|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~g 168 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRG 168 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTSCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999986 3 3556999999999988
Q ss_pred CCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHH
Q 005095 346 SAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVL 425 (715)
Q Consensus 346 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~L 425 (715)
+ .++++.|++. +.+++.++..|.||||+|+..|+.+++++|
T Consensus 169 ~----------------------------------~~~v~~Ll~~-----g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 169 H----------------------------------VECVNSLIAY-----GGNIDHKISHLGTPLYLACENQQRACVKKL 209 (285)
T ss_dssp C----------------------------------HHHHHHHHHT-----TCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred C----------------------------------HHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 6 3677777765 667788889999999999999999999999
Q ss_pred HHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhC
Q 005095 426 IQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLA 488 (715)
Q Consensus 426 l~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~ 488 (715)
+++|++ ++. |..|+||||+|+..++.+++++|+++|++++. +|.+|+||||+|+...
T Consensus 210 l~~ga~-~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~----~d~~g~t~l~~A~~~~ 266 (285)
T 3d9h_A 210 LESGAD-VNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQA----KNAEGKRPVELVPPES 266 (285)
T ss_dssp HHTTCC-TTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC----CCTTSCCGGGGSCTTS
T ss_pred HHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----cCCCCCCHHHHhcCcc
Confidence 999999 554 89999999999999999999999999999884 9999999999999543
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-41 Score=365.77 Aligned_cols=277 Identities=16% Similarity=0.186 Sum_probs=219.4
Q ss_pred hHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCChHHHHHHHc
Q 005095 165 APLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRN-KVGNTALCFAAVS 243 (715)
Q Consensus 165 T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d-~~G~TpLh~Aa~~ 243 (715)
++++-+...|+.++++.++.. ..+..|.||||+|+..|+ +++++|+. .+++.+| ..|+||||+|+..
T Consensus 68 ~~~~~~~~~g~~~~~~~~~~~-------~~~~~g~t~L~~Aa~~~~-~~~~~L~~----~~~n~~d~~~g~t~Lh~Aa~~ 135 (373)
T 2fo1_E 68 GYGNGNDFLGDFNHTNLQIPT-------EPEPESPIKLHTEAAGSY-AITEPITR----ESVNIIDPRHNRTVLHWIASN 135 (373)
T ss_dssp ---------------------------------CCCHHHHHHHSSS-CCCSCCST----TTTTTCCCSSCCCHHHHHHCT
T ss_pred ccCCCCCcccccccccccccc-------CCCCCCccHHHHHhcCCc-hHHHHhcc----ccccccCCcCCCCHHHHHHHC
Confidence 466778888999999877643 237889999999999665 77777744 5788888 7999999999999
Q ss_pred CcHHHHHHHH--------hcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhH
Q 005095 244 GVTKIAEVMV--------NKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDV 315 (715)
Q Consensus 244 g~~~iv~~Ll--------~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~i 315 (715)
|+.+++++|+ ++|++++ .+|..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|+.++
T Consensus 136 g~~~~v~~Ll~~~~~~ll~~ga~vn-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~ 214 (373)
T 2fo1_E 136 SSAEKSEDLIVHEAKECIAAGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGM 214 (373)
T ss_dssp TCCSCCTTHHHHHHHHHHHTCCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCc-CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHH
Confidence 9998877776 8899986 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhC---cccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHH
Q 005095 316 ALDLIQHH---PQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVL 392 (715)
Q Consensus 316 v~~Ll~~~---~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l 392 (715)
+++|++++ .+ ++..|.+|.||||+|+..+.. .. .++++.|++.+.
T Consensus 215 v~~Ll~~~~~~~~-~~~~d~~g~t~L~~A~~~~~~----~~---------------------------~~~v~~Ll~~g~ 262 (373)
T 2fo1_E 215 MVYMLNSTKLKGD-IEELDRNGMTALMIVAHNEGR----DQ---------------------------VASAKLLVEKGA 262 (373)
T ss_dssp HHHHTTSHHHHHT-TSCCCTTSCCHHHHHHHSCST----TH---------------------------HHHHHHHHHHTC
T ss_pred HHHHHhcCccccC-hhhcCCCCCCHHHHHHHhCCc----ch---------------------------HHHHHHHHHCCC
Confidence 99999987 45 478899999999999987631 01 366677777654
Q ss_pred hcCc---ccccccccCCchHHHHHHHcCCHHHHHHHHHhC-CCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhh
Q 005095 393 LLDD---SKIGELLRKPSRLLFTAVELGNVEFLMVLIQMY-PNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDL 468 (715)
Q Consensus 393 ~~~~---~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~-~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~ 468 (715)
+.+. ...+..+..|.||||+|+..|+.++|++|++++ ++ ++.+|..|+||||+|+.+|+.+++++|+++|++++.
T Consensus 263 ~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 263 KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred CcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC
Confidence 4332 112346678999999999999999999999998 66 899999999999999999999999999999999984
Q ss_pred hhcccCCCCchHHHHhhhhCCCC
Q 005095 469 IASYKDENNNNMLHLAGKLAPPD 491 (715)
Q Consensus 469 l~~~~d~~G~TpLh~A~~~~~~~ 491 (715)
+|..|+||||+|+..|+.+
T Consensus 342 ----~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 342 ----VDATDHTARQLAQANNHHN 360 (373)
T ss_dssp ----CCSSSCCHHHHHHHTTCHH
T ss_pred ----CCCCCCCHHHHHHHcCCHH
Confidence 9999999999999998855
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=9.8e-41 Score=358.84 Aligned_cols=254 Identities=16% Similarity=0.104 Sum_probs=184.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
|.+|.||||+||..|+.++|++|++ .|++++.+|..|.||||+|+..|+.++|++|+++|++.. +.+|.||||+|
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~--~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~g~t~L~~A 91 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIE--TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS---LWHGQKPIHLA 91 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC---CBTTBCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc---ccCCCCHHHHH
Confidence 5566666666666666666666666 566666666666666666666666666666666666432 24566666666
Q ss_pred HHcCCHHHHHHHHhc----CCCCCc-----------------cccccccHHHHHHHcC--ChhHHHHHHhhCcccceecC
Q 005095 275 ALLGHKEMIWYLYSV----TKEEDL-----------------KEEDRIELLVAVIDAG--LYDVALDLIQHHPQLAMARD 331 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~----ga~~~~-----------------~~~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~d 331 (715)
+..|+.++|++|+++ |++++. .+..|.||||+|+..| +.+++++|+++++++ +.+|
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d 170 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKD 170 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCC
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccC
Confidence 666666666666666 555554 6666667777777766 667777777766664 5666
Q ss_pred CCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHH
Q 005095 332 GNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLF 411 (715)
Q Consensus 332 ~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh 411 (715)
..|+||||+|+..|+ .+++++|++.+....+.+++..+..|.||||
T Consensus 171 ~~g~t~L~~A~~~g~----------------------------------~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~ 216 (364)
T 3ljn_A 171 KADETPLMRAMEFRN----------------------------------REALDLMMDTVPSKSSLRLDYANKQGNSHLH 216 (364)
T ss_dssp TTSCCHHHHHHHTTC----------------------------------HHHHHHHHHHCSCSSSCCTTCCCTTCCCTTH
T ss_pred CCCCCHHHHHHHcCC----------------------------------HHHHHHHHhcccccccccccccCCCCCcHHH
Confidence 667777777776665 2555666655444444457777788899999
Q ss_pred HHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhh--------cccCCCCchHHHH
Q 005095 412 TAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIA--------SYKDENNNNMLHL 483 (715)
Q Consensus 412 ~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~--------~~~d~~G~TpLh~ 483 (715)
+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++... ...+..|+|||+.
T Consensus 217 ~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (364)
T 3ljn_A 217 WAILINWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVP 295 (364)
T ss_dssp HHHTTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSC
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchh
Confidence 99999999999999999999 78999999999999999999999999999998875310 1157788999999
Q ss_pred hhhhCC
Q 005095 484 AGKLAP 489 (715)
Q Consensus 484 A~~~~~ 489 (715)
|+..++
T Consensus 296 aa~~~~ 301 (364)
T 3ljn_A 296 AAADPS 301 (364)
T ss_dssp SSCCHH
T ss_pred hhhccC
Confidence 987764
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.5e-40 Score=335.03 Aligned_cols=233 Identities=21% Similarity=0.222 Sum_probs=161.7
Q ss_pred ccccCCCCCChHHHHHHHcC-------------CHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 005095 155 GVERNCFTSYAPLHLAALKG-------------DWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLM 221 (715)
Q Consensus 155 ~~~~~~~~g~T~Lh~Aa~~g-------------~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~ 221 (715)
++|.+|.+|+||||+|+..| +.+++++|++.++..... .|..|.||||+|+..|+.++|++|++
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~-- 78 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLE-- 78 (253)
T ss_dssp --------------------------------------------------C-CCTTSCCHHHHHHHTTCHHHHHHHHH--
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHH--
Confidence 46778899999999999987 788888888776654433 37888888888888888888888888
Q ss_pred CCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccc
Q 005095 222 TPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRI 301 (715)
Q Consensus 222 ~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~ 301 (715)
.|++++.+|..|+||||+|+..|+.+++++|+++++.....++..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 79 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 158 (253)
T 1yyh_A 79 ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 158 (253)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCC
Confidence 78888888888888888888888888888888888733347788888888888888888888888888888888888888
Q ss_pred cHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHH
Q 005095 302 ELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQAL 381 (715)
Q Consensus 302 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~ 381 (715)
||||+|+..|+.+++++|+++|+++ +.+|.
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~------------------------------------------------- 188 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANK-DMQNN------------------------------------------------- 188 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-------------------------------------------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-------------------------------------------------
Confidence 8888888888888888888887764 44443
Q ss_pred HHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHH
Q 005095 382 ELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYE 461 (715)
Q Consensus 382 ~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 461 (715)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+++|+.+++++|.+
T Consensus 189 -----------------------~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 189 -----------------------REETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp -----------------------TSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred -----------------------CCCCHHHHHHHCCCHHHHHHHHHcCCC-ccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 455666666667888999999999999 78889999999999999999999999987
Q ss_pred cCc
Q 005095 462 LGA 464 (715)
Q Consensus 462 ~ga 464 (715)
...
T Consensus 245 ~~~ 247 (253)
T 1yyh_A 245 EHH 247 (253)
T ss_dssp ---
T ss_pred Hhh
Confidence 543
No 17
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.4e-40 Score=354.66 Aligned_cols=267 Identities=17% Similarity=0.101 Sum_probs=233.6
Q ss_pred ccccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCC
Q 005095 155 GVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGN 234 (715)
Q Consensus 155 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~ 234 (715)
..+..|..|+||||+||..|+.++|++|++.+. +++.. |..|.||||+|+..|+.++|++|++ .|++++. .+|.
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~--~~g~ 85 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETGV-SPTIQ-NRFGCTALHLACKFGCVDTAKYLAS--VGEVHSL--WHGQ 85 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTCCCHHHHHHHHCCHHHHHHHHH--HCCCCCC--BTTB
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-Ccccc-CCCCCcHHHHHHHcCCHHHHHHHHH--CCCCccc--cCCC
Confidence 455677889999999999999999999998754 45554 8999999999999999999999999 6875553 5799
Q ss_pred hHHHHHHHcCcHHHHHHHHhc----CCCCCcc-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHhcCC
Q 005095 235 TALCFAAVSGVTKIAEVMVNK----NRELPSI-----------------RGNKGATPLCMAALLG--HKEMIWYLYSVTK 291 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~----g~~~~~~-----------------~d~~g~tpLh~A~~~g--~~~iv~~Ll~~ga 291 (715)
||||+|+..|+.+++++|+++ |.+++ . +|..|.||||+|+..| +.++|++|+++|+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPE-SLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHH-HHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHH-HHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 999999999999999999999 77654 3 7788999999999999 9999999999999
Q ss_pred CCCccccccccHHHHHHHcCChhHHHHHHhhCccc----ceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcc
Q 005095 292 EEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQL----AMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGM 367 (715)
Q Consensus 292 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~----~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~ 367 (715)
+++.+|..|.||||+|+..|+.+++++|++++++. ++.+|..|+||||+|+..|+
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~--------------------- 223 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW--------------------- 223 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC---------------------
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC---------------------
Confidence 99999999999999999999999999999999882 37889999999999999987
Q ss_pred hhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCC-----------cccc
Q 005095 368 RAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNL-----------IWKV 436 (715)
Q Consensus 368 ~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~-----------~~~~ 436 (715)
.++++.|++. +++++..|..|.||||+|+..|+.+++++|++++++. ....
T Consensus 224 -------------~~~v~~Ll~~-----gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 285 (364)
T 3ljn_A 224 -------------EDVAMRFVEM-----GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLP 285 (364)
T ss_dssp -------------HHHHHHHHTT-----TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCG
T ss_pred -------------HHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccc
Confidence 3677777664 6778888999999999999999999999999998762 1125
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 437 DDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 437 d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
+..|+|||+.|+..++.+.+..|+..+++..
T Consensus 286 ~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~ 316 (364)
T 3ljn_A 286 DRVVWLDFVPAAADPSKQEVLQLLQEKLDEV 316 (364)
T ss_dssp GGCCCCTTSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhccCHHHHHHHHHHHHHHH
Confidence 6789999999999999988888888877654
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9e-39 Score=320.25 Aligned_cols=228 Identities=18% Similarity=0.142 Sum_probs=205.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHH
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCF 239 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~ 239 (715)
+..+.||||.|+..|+.+.+++|++.++...+.. |..|.||||+|+..|+.++|++|++ .|++++.+|..|+||||+
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~ 79 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQ--LGVPVNDKDDAGWSPLHI 79 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHH--TTCCSCCCCTTSCCHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHH--hCCCCCCcCCCCCCHHHH
Confidence 3456799999999999999999999887766554 8999999999999999999999999 899999999999999999
Q ss_pred HHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHH
Q 005095 240 AAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDL 319 (715)
Q Consensus 240 Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~L 319 (715)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999999999999986 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccc
Q 005095 320 IQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKI 399 (715)
Q Consensus 320 l~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~ 399 (715)
+++++++ +.+|..
T Consensus 159 l~~g~~~-~~~~~~------------------------------------------------------------------ 171 (231)
T 3aji_A 159 LFYKAST-NIQDTE------------------------------------------------------------------ 171 (231)
T ss_dssp HHTTCCS-CCCCTT------------------------------------------------------------------
T ss_pred HhcCCCc-cccCCC------------------------------------------------------------------
Confidence 9988774 444444
Q ss_pred cccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcc
Q 005095 400 GELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAH 465 (715)
Q Consensus 400 ~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~ 465 (715)
|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|.++|++
T Consensus 172 ------g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 172 ------GNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp ------SCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred ------CCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 45555566666788999999999999 788999999999999999999999999998875
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-39 Score=331.49 Aligned_cols=204 Identities=17% Similarity=0.161 Sum_probs=134.4
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCc
Q 005095 245 VTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHP 324 (715)
Q Consensus 245 ~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~ 324 (715)
+.+++++|+++|++++...|..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|+++++
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 55555555555555544445555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCccccccccc
Q 005095 325 QLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLR 404 (715)
Q Consensus 325 ~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~ 404 (715)
...+.++..|.||||+|+..++. ++++.|++. +.+++.++.
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~----------------------------------~~v~~Ll~~-----g~~~~~~d~ 155 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVE----------------------------------GMLEDLINS-----HADVNAVDD 155 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCS----------------------------------SHHHHHHHT-----TCCTTCBCT
T ss_pred CCccccCCCCCcHHHHHHHcChH----------------------------------HHHHHHHHc-----CCCCCCcCC
Confidence 33355555566666666555441 333444332 444555566
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHh
Q 005095 405 KPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLA 484 (715)
Q Consensus 405 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A 484 (715)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~----~d~~g~tpl~~A 230 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI----TDHMDRLPRDIA 230 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC----CCTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc----cccCCCCHHHHH
Confidence 778888888888999999999999999 789999999999999999999999999999999985 999999999999
Q ss_pred hhhCCCCc
Q 005095 485 GKLAPPDR 492 (715)
Q Consensus 485 ~~~~~~~~ 492 (715)
++.|+.+.
T Consensus 231 ~~~g~~~i 238 (253)
T 1yyh_A 231 QERMHHDI 238 (253)
T ss_dssp HHTTCHHH
T ss_pred HHcCCHHH
Confidence 99998653
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.8e-39 Score=332.91 Aligned_cols=252 Identities=15% Similarity=0.067 Sum_probs=162.9
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhhCccc--hhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCC
Q 005095 157 ERNCFTSYAPLHLAALKGDWDFARNFFNLNPEA--VCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGN 234 (715)
Q Consensus 157 ~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~--~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~ 234 (715)
+..|.+|+||||+||..|+.++|++|++.+... ++. .|..|+||||+|+..|+.++|++|++ +|++++.+|..|.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~~~~~~~~g~ 79 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDL-QNDLGQTALHLAAILGEASTVEKLYA--AGAGVLVAERGGH 79 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGC-CCTTSCCHHHHHHHHTCHHHHHHHHH--TTCCSSCCCTTSC
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc-cCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCCCCCCC
Confidence 456777888888888888888888888765442 333 37778888888888888888888888 7888888888888
Q ss_pred hHHHHHHHcCcHHHHHHHHhcCCCCCc------------cCCCCCCCHHHHHHHcCCH-HHHHHHHhcCCCCCccccccc
Q 005095 235 TALCFAAVSGVTKIAEVMVNKNRELPS------------IRGNKGATPLCMAALLGHK-EMIWYLYSVTKEEDLKEEDRI 301 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~g~~~~~------------~~d~~g~tpLh~A~~~g~~-~iv~~Ll~~ga~~~~~~~~g~ 301 (715)
||||+|+..|+.+++++|+++|++... .....+.+|++.++..+.. .....+...+.+++.++..|.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 888888888888888888887765421 1122344555555544432 233334444555666666666
Q ss_pred cHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHH
Q 005095 302 ELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQAL 381 (715)
Q Consensus 302 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~ 381 (715)
||||+|+..|+.+++++|+++++++
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~~------------------------------------------------------- 184 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGADL------------------------------------------------------- 184 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCT-------------------------------------------------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-------------------------------------------------------
Confidence 6666666666666666666655543
Q ss_pred HHHHHHHHHHHhcCccccccccc-CCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHH
Q 005095 382 ELVKRLWEQVLLLDDSKIGELLR-KPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIY 460 (715)
Q Consensus 382 ~~~~~l~~~~l~~~~~~~~~~~~-~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll 460 (715)
+..+. .|.||||+|++.|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.+++++|+
T Consensus 185 ------------------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 185 ------------------NKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp ------------------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred ------------------CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 22232 367777888888899999999999999 8899999999999999999999999999
Q ss_pred HcCcchhhhhcccCCCCchHHHHhhhhCC
Q 005095 461 ELGAHKDLIASYKDENNNNMLHLAGKLAP 489 (715)
Q Consensus 461 ~~ga~~~~l~~~~d~~G~TpLh~A~~~~~ 489 (715)
++|++++ .+|..|.|||++|....+
T Consensus 246 ~~ga~~~----~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 246 AHGAPEP----EDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HTTCCCC----CCC---------------
T ss_pred HcCCCcC----cCCCcccccccccCCccc
Confidence 9999998 499999999999987653
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.6e-39 Score=324.34 Aligned_cols=164 Identities=19% Similarity=0.223 Sum_probs=85.4
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHh---hCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCC
Q 005095 158 RNCFTSYAPLHLAALKGDWDFARNFFN---LNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGN 234 (715)
Q Consensus 158 ~~~~~g~T~Lh~Aa~~g~~~~v~~LL~---~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~ 234 (715)
..|.+|+||||+||..|+.+++++|++ ..+..++.. |..|.||||+|+..|+.+++++|++ .|++++.+|..|.
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~ 80 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVT--AGASPMALDRHGQ 80 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHH--cCCCccccCCCCC
Confidence 345555555555555555555555554 123333332 4555555555555555555555555 4555555555555
Q ss_pred hHHHHHHHcCcHHHHHHHHhcCC----CCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccc-cccccHHHHHHH
Q 005095 235 TALCFAAVSGVTKIAEVMVNKNR----ELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKE-EDRIELLVAVID 309 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~g~----~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~L~~A~~ 309 (715)
||||+|+..|+.+++++|+++++ +++ .++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLE-ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcccccc-ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 55555555555555555555554 332 445555555555555555555555555555555444 444455555555
Q ss_pred cCChhHHHHHHhhCcc
Q 005095 310 AGLYDVALDLIQHHPQ 325 (715)
Q Consensus 310 ~g~~~iv~~Ll~~~~~ 325 (715)
.|+.+++++|+++|++
T Consensus 160 ~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 160 NNSLSMVQLLLQHGAN 175 (241)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 5555555554444443
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.2e-38 Score=314.96 Aligned_cols=215 Identities=20% Similarity=0.210 Sum_probs=179.6
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHH
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCM 273 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~ 273 (715)
.|.+|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..|+.+++++|+++|++++ .++..|.||||+
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 83 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQ--AGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-PKDAEGSTCLHL 83 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-CCCTTSCCHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHH--cCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCcHHHH
Confidence 37778888888888888888888888 788888888888888888888888888888888888775 677888888888
Q ss_pred HHHcCCHHHHHHHHhcC-CCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCc
Q 005095 274 AALLGHKEMIWYLYSVT-KEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGS 352 (715)
Q Consensus 274 A~~~g~~~iv~~Ll~~g-a~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~ 352 (715)
|+..|+.+++++|+++| .+++..+..|.||||.|+..|+.+++++|+++++++ +.+|
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~--------------------- 141 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRD--------------------- 141 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC---------------------
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccC---------------------
Confidence 88888888888888887 777878888888888888888888888888777664 3333
Q ss_pred chhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCC
Q 005095 353 QLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNL 432 (715)
Q Consensus 353 ~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~ 432 (715)
..|.||||+|+..|+.+++++|+++|++
T Consensus 142 ---------------------------------------------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~- 169 (237)
T 3b7b_A 142 ---------------------------------------------------NEENICLHWAAFSGCVDIAEILLAAKCD- 169 (237)
T ss_dssp ---------------------------------------------------TTSCCHHHHHHHHCCHHHHHHHHTTTCC-
T ss_pred ---------------------------------------------------CCCCCHHHHHHHCCCHHHHHHHHHcCCC-
Confidence 3456666777777888999999999999
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCC
Q 005095 433 IWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAP 489 (715)
Q Consensus 433 ~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~ 489 (715)
++.+|..|+||||+|+..++.+++++|+++|++++. +|.+|+||||+|+..++
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~----~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL----KNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC----CCTTSCCHHHHSCTTCH
T ss_pred CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc----cCCCCCCHHHHHHHHHH
Confidence 788899999999999999999999999999999885 89999999999998875
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-39 Score=336.44 Aligned_cols=265 Identities=15% Similarity=0.120 Sum_probs=219.1
Q ss_pred HHHHcCCHHHHHHHHhhCccchh-------hccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHH
Q 005095 169 LAALKGDWDFARNFFNLNPEAVC-------VRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA 241 (715)
Q Consensus 169 ~Aa~~g~~~~v~~LL~~~~~~~~-------~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa 241 (715)
.++..|+.+.++.++........ ...+..|.||||.||..|+.++|++|++ .|++++.+|..|.||||+|+
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~ 81 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLE--RGADINYANVDGLTALHQAC 81 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHH--HCCCTTCBCTTCCBHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHH--cCCCCcccCCCCCCHHHHHH
Confidence 56778888888888866443111 1123467899999999999999999999 79999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHh
Q 005095 242 VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQ 321 (715)
Q Consensus 242 ~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 321 (715)
..|+.+++++|+++|++++ .+|..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..++.++++.++.
T Consensus 82 ~~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 82 IDDNVDMVKFLVENGANIN-QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp HTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 9999999999999999986 789999999999999999999999999999999999999999999999999999998887
Q ss_pred hCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccc
Q 005095 322 HHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGE 401 (715)
Q Consensus 322 ~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~ 401 (715)
......+..+..+.++++ ..+..++.. .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~l~~----~~~~~~~ 194 (299)
T 1s70_B 161 RQGVDIEAARKEEERIML------------------------------------------RDARQWLNS----GHINDVR 194 (299)
T ss_dssp HHTCCHHHHHHHHHHHHH------------------------------------------HHHHHHHHH----TCCCCCC
T ss_pred hcCCCchhhhhhhhhHHH------------------------------------------HHHHHHHhc----cCcchhh
Confidence 643322222222222221 111222222 2333344
Q ss_pred cccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHH
Q 005095 402 LLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNML 481 (715)
Q Consensus 402 ~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpL 481 (715)
.+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.+++++|+++|++++. +|..|+|||
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~----~d~~g~t~l 269 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA----VNKVGQTAF 269 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----CCTTSCCTT
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC----cCCCCCCHH
Confidence 567899999999999999999999999999 889999999999999999999999999999999984 999999999
Q ss_pred HHhhhh
Q 005095 482 HLAGKL 487 (715)
Q Consensus 482 h~A~~~ 487 (715)
|+|++.
T Consensus 270 ~~A~~~ 275 (299)
T 1s70_B 270 DVADED 275 (299)
T ss_dssp TSCCSG
T ss_pred HHHHHH
Confidence 999753
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.2e-38 Score=327.23 Aligned_cols=262 Identities=17% Similarity=0.142 Sum_probs=182.6
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc---cccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCH
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNLMTPED---LALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATP 270 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~---i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tp 270 (715)
.|.+|+||||+||..|+.++|++|++ .|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tp 81 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLG--FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL-VAERGGHTA 81 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHH--HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTSCCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHh--cCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCH
Confidence 48899999999999999999999998 5666 88888999999999999999999999999999986 788899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCccc
Q 005095 271 LCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFAS 350 (715)
Q Consensus 271 Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~ 350 (715)
||+|+..|+.+++++|+++|++........ ++.... ......+.++++.++..+..
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~------------------~~~~~~---~~~~~~~~~~~~~~~~~~~~--- 137 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDT------------------YLTQSQ---DCTPDTSHAPAAVDSQPNPE--- 137 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------------------------
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHH------------------Hhhccc---ccCcchhcchhhhccccccc---
Confidence 999999999999999999888754332211 111111 22234566777776654321
Q ss_pred CcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCC
Q 005095 351 GSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYP 430 (715)
Q Consensus 351 ~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~ 430 (715)
......+...+.+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 138 -----------------------------------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 182 (282)
T 1oy3_D 138 -----------------------------------NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182 (282)
T ss_dssp -----------------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred -----------------------------------hhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 011112223356677888999999999999999999999999999
Q ss_pred CCccccCC-CCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCCCCccccCCCchhhhHHHhhh
Q 005095 431 NLIWKVDD-HSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHW 509 (715)
Q Consensus 431 d~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~~l~l~~ga~~~~~~~l~~ 509 (715)
+ ++.++. .|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|++.++.+
T Consensus 183 ~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~----~d~~g~tpL~~A~~~~~~~------------------ 239 (282)
T 1oy3_D 183 D-LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA----RMYGGRTPLGSALLRPNPI------------------ 239 (282)
T ss_dssp C-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----CCTTSCCHHHHHHTSSCHH------------------
T ss_pred C-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc----cccCCCCHHHHHHHcCCcH------------------
Confidence 9 666664 599999999999999999999999999984 9999999999999988743
Q ss_pred HHHHHHhhc-chhHhhhhcCCCCchhhhHHHhhH
Q 005095 510 FKEIEKVVQ-PSYREAKNSEGRTPHILFSEEHRR 542 (715)
Q Consensus 510 ~~~v~~ll~-~~~~~~~n~~G~Tpl~~a~~~~~~ 542 (715)
.++.+++ +++++.+|.+|+||+++|......
T Consensus 240 --~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 240 --LARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp --HHHHHHHTTCCCCCCC----------------
T ss_pred --HHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 3444444 566799999999999999876543
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.9e-38 Score=315.28 Aligned_cols=219 Identities=20% Similarity=0.211 Sum_probs=186.9
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhc--CCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHH
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNL--MTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPL 271 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~--~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpL 271 (715)
.|.+|+||||+||..|+.+++++|++. ..+.+++.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.|||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l 83 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-ALDRHGQTAA 83 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHH
Confidence 488999999999999999999999862 1588999999999999999999999999999999999986 7899999999
Q ss_pred HHHHHcCCHHHHHHHHhcCC----CCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecC-CCCCCHHHHHHhCCC
Q 005095 272 CMAALLGHKEMIWYLYSVTK----EEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARD-GNGETALHVLARKPS 346 (715)
Q Consensus 272 h~A~~~g~~~iv~~Ll~~ga----~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~A~~~~~ 346 (715)
|+|+..|+.+++++|+++++ +++..+..|.||||.|+..|+.+++++|++.++++ +..+ .
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~-------------- 148 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIK-------------- 148 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT--------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccccc--------------
Confidence 99999999999999999987 78888999999999999999999999999988775 3333 3
Q ss_pred CcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHH
Q 005095 347 AFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLI 426 (715)
Q Consensus 347 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll 426 (715)
.|.||||+|+..|+.+++++|+
T Consensus 149 ----------------------------------------------------------~g~t~L~~A~~~~~~~~v~~Ll 170 (241)
T 1k1a_A 149 ----------------------------------------------------------SGRSPLIHAVENNSLSMVQLLL 170 (241)
T ss_dssp ----------------------------------------------------------TCCCHHHHHHHTTCHHHHHHHH
T ss_pred ----------------------------------------------------------CCCcHHHHHHHcCCHHHHHHHH
Confidence 3455666666667788888888
Q ss_pred HhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCCCC
Q 005095 427 QMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPD 491 (715)
Q Consensus 427 ~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~ 491 (715)
++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..++.+
T Consensus 171 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----~~~~g~tpl~~A~~~~~~~ 230 (241)
T 1k1a_A 171 QHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL----KNCHNDTPLMVARSRRVID 230 (241)
T ss_dssp HTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC----CCTTSCCTTTTCSSHHHHH
T ss_pred HcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC----cCCCCCCHHHHHHhcCcHH
Confidence 88888 777888888888888888888888888888888874 8888888888888876544
No 26
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.7e-37 Score=312.26 Aligned_cols=228 Identities=18% Similarity=0.196 Sum_probs=203.1
Q ss_pred ccccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCC
Q 005095 155 GVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGN 234 (715)
Q Consensus 155 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~ 234 (715)
+++..+.+|+||||+||..|+.+++++|++.+.. ++.. +..|.||||+|+..|+.+++++|++ .|++++.+|..|.
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTC-SEDQRTPLMEAAENNHLEAVKYLIK--AGALVDPKDAEGS 78 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCC-CTTCCCHHHHHHHTTCHHHHHHHHT--TTCCCCCCCTTSC
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCcc-CCCCCCHHHHHHHhCCHHHHHHHHh--CCCCCCCCCCCCC
Confidence 4677899999999999999999999999987554 4443 8899999999999999999999999 8999999999999
Q ss_pred hHHHHHHHcCcHHHHHHHHhcC-CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCCh
Q 005095 235 TALCFAAVSGVTKIAEVMVNKN-RELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY 313 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~g-~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~ 313 (715)
||||+|+..|+.+++++|+++| .++ +.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDV-NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 9999999999999999999999 455 47899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHh
Q 005095 314 DVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLL 393 (715)
Q Consensus 314 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~ 393 (715)
+++++|++.++++ +.+|..|
T Consensus 158 ~~~~~Ll~~g~~~-~~~~~~g----------------------------------------------------------- 177 (237)
T 3b7b_A 158 DIAEILLAAKCDL-HAVNIHG----------------------------------------------------------- 177 (237)
T ss_dssp HHHHHHHTTTCCT-TCCCTTC-----------------------------------------------------------
T ss_pred HHHHHHHHcCCCC-CCcCCCC-----------------------------------------------------------
Confidence 9999999998775 4444444
Q ss_pred cCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHH
Q 005095 394 LDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYE 461 (715)
Q Consensus 394 ~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 461 (715)
.||||+|++.|+.+++++|+++|++ ++.+|.+|+||||+|+.+++.+.+..|++
T Consensus 178 -------------~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 178 -------------DSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp -------------CCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred -------------CCHHHHHHHhCCHhHHHHHHHcCCC-CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4555556666778899999999999 78889999999999999999876666654
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=326.97 Aligned_cols=232 Identities=15% Similarity=0.188 Sum_probs=158.0
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchh------hccCCCCCcHHHHHHHcCCH-HHHHHHHhcCCCcccccc
Q 005095 157 ERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVC------VRISRNQDTALHIAAGARRT-LFVQELVNLMTPEDLALR 229 (715)
Q Consensus 157 ~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~------~~~d~~g~TpLh~Aa~~g~~-~iv~~Ll~~~~g~~i~~~ 229 (715)
..+|..+.+||+.||..|+.++|++||+.+..... ...+..|.||||.|+..++. +++++|++ .|+++|.+
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~--~Gadvn~~ 82 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA--SGLGVNVT 82 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------CCCCTTCC
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHH--CCCCCCCc
Confidence 34566778999999999999999999987654321 12366788999999887765 47788888 78999999
Q ss_pred cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHH
Q 005095 230 NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVID 309 (715)
Q Consensus 230 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~ 309 (715)
|.+|+||||+|+..|+.++|++|++.|++++ .++..|.||+|+|+..++.+++++|+++|++++.+|..|.||||+|+.
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~-~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAG-ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcC-ccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999998876 788889999999999999999999999999988888888888888888
Q ss_pred cCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHH
Q 005095 310 AGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWE 389 (715)
Q Consensus 310 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~ 389 (715)
.|+.+++++|+++|+++ +.+|..
T Consensus 162 ~g~~~~v~~Ll~~gadv-n~~~~~-------------------------------------------------------- 184 (269)
T 4b93_B 162 GGHHELVALLLQHGASI-NASNNK-------------------------------------------------------- 184 (269)
T ss_dssp TTCGGGHHHHHHTTCCT-TCBCTT--------------------------------------------------------
T ss_pred CCCHHHHHHHHHCCCCC-CccccC--------------------------------------------------------
Confidence 88888888888887764 444444
Q ss_pred HHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCC-HHHHHHHHHcCcc
Q 005095 390 QVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQ-EKIFNLIYELGAH 465 (715)
Q Consensus 390 ~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~-~~iv~~Ll~~ga~ 465 (715)
|.||||+|+..|+.++|++|+++|+| ++.+|.+|+||||+|+++++ .+++++|.+.++.
T Consensus 185 ----------------g~t~Lh~A~~~g~~~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 185 ----------------GNTALHEAVIEKHVFVVELLLLHGAS-VQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp ----------------SCBHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred ----------------CCcHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 45555556666778889999999988 78889999999999988775 3444455554443
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.9e-37 Score=306.81 Aligned_cols=219 Identities=16% Similarity=0.169 Sum_probs=161.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--ccccc-ccCCCChHHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTP--EDLAL-RNKVGNTALCF 239 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g--~~i~~-~d~~G~TpLh~ 239 (715)
|+||||+||..|+.+++++|++.++...... |..|.||||+|+..|+.+++++|++ .| .+++. +|..|.||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLS--KMENVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TCTTCCGGGCCCTTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccC-CCCCCCHHHHHHHcCCHHHHHHHHh--ccccccccccCCCCCCCHHHH
Confidence 5688888888888888888888776655443 7888888888888888888888888 56 55665 77788888888
Q ss_pred HHHcCcHHHHHHHHhcC--CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHH
Q 005095 240 AAVSGVTKIAEVMVNKN--RELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVAL 317 (715)
Q Consensus 240 Aa~~g~~~iv~~Ll~~g--~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~ 317 (715)
|+..|+.+++++|+++| ++++ .++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLN-KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCcccc-cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 88888888888888887 6664 67788888888888888888888888888888888777888888887777777777
Q ss_pred HHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcc
Q 005095 318 DLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDS 397 (715)
Q Consensus 318 ~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~ 397 (715)
+|++.++..++.+|..|
T Consensus 158 ~Ll~~g~~~~~~~d~~g--------------------------------------------------------------- 174 (228)
T 2dzn_A 158 LLCGLGKSAVNWQDKQG--------------------------------------------------------------- 174 (228)
T ss_dssp HHHTTTCCCSCCCCTTS---------------------------------------------------------------
T ss_pred HHHhcCcccccCcCCCC---------------------------------------------------------------
Confidence 77777622224433333
Q ss_pred cccccccCCchHHHHHHHcCCHHHHHHHH-HhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHH
Q 005095 398 KIGELLRKPSRLLFTAVELGNVEFLMVLI-QMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYE 461 (715)
Q Consensus 398 ~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll-~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 461 (715)
.||||+|+..|+.+++++|+ ++|++ ++.+|..|+||||+|+.. +++++|++
T Consensus 175 ---------~t~L~~A~~~~~~~~v~~Ll~~~ga~-~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 175 ---------WTPLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp ---------CCHHHHHHHTTCHHHHHHHHHHHCCC-SCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred ---------CCHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 34444444455667777777 66777 667777777777777543 45555554
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=320.87 Aligned_cols=215 Identities=18% Similarity=0.221 Sum_probs=163.4
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc--------cccccCCCChHHHHHHHcCcH-HHHHHHHhcCCCCCccCC
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNLMTPED--------LALRNKVGNTALCFAAVSGVT-KIAEVMVNKNRELPSIRG 264 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~--------i~~~d~~G~TpLh~Aa~~g~~-~iv~~Ll~~g~~~~~~~d 264 (715)
+|..+.+||+.||..|+.++|++||+ .+++ ++..|..|.||||.|+..++. .++++|+++|++++ .+|
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~--~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn-~~d 83 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLE--WTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN-VTS 83 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHT--CC----------------------------------------CCCCTT-CCC
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHH--CCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-CcC
Confidence 47778899999999999999999999 5654 566778899999999988775 48899999999986 789
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhC
Q 005095 265 NKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARK 344 (715)
Q Consensus 265 ~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 344 (715)
.+|.||||+|+..|+.++|++|++.|++++.++.+|.||+|.|+..++.+++++|++.++++ +.+|..|+|
T Consensus 84 ~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~T-------- 154 (269)
T 4b93_B 84 QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNT-------- 154 (269)
T ss_dssp TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCC--------
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCC--------
Confidence 99999999999999999999999999999999999999999999999999999999988775 555555554
Q ss_pred CCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHH
Q 005095 345 PSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMV 424 (715)
Q Consensus 345 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~ 424 (715)
|||+|+..|+.++|++
T Consensus 155 ----------------------------------------------------------------pL~~A~~~g~~~~v~~ 170 (269)
T 4b93_B 155 ----------------------------------------------------------------PLIYACSGGHHELVAL 170 (269)
T ss_dssp ----------------------------------------------------------------HHHHHHHTTCGGGHHH
T ss_pred ----------------------------------------------------------------HHHHHHHCCCHHHHHH
Confidence 4555555667789999
Q ss_pred HHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCC
Q 005095 425 LIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAP 489 (715)
Q Consensus 425 Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~ 489 (715)
|+++|++ ++.+|..|+||||+|+.+|+.++|++|+++|+|++. +|.+|+||||+|+++++
T Consensus 171 Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~----~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 171 LLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV----LNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC----CCTTSCCSGGGSCTTCH
T ss_pred HHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC----cCCCCCCHHHHHHhCCc
Confidence 9999999 889999999999999999999999999999999984 99999999999998764
No 30
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=307.13 Aligned_cols=231 Identities=19% Similarity=0.172 Sum_probs=173.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
|..|.||||.|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++...+..|.||||+|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVE--AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHH--cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 5667777777777777777777777 67777777777777777777777777777777777776655556677777777
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcch
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQL 354 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 354 (715)
+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|+++++++ +.++..|.||||+|+..++. .
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~------~ 156 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHS------V 156 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCS------S
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCCh------H
Confidence 7777777777777777777777777777777777777777777777777764 66777777777777755431 1
Q ss_pred hhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCccccccccc-CCchHHHHHHHcCCHHHHHHHHHhCCCCc
Q 005095 355 GFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLR-KPSRLLFTAVELGNVEFLMVLIQMYPNLI 433 (715)
Q Consensus 355 ~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~-~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~ 433 (715)
++++.|++. +.+++..+. .|.||||+|+..|+.+++++|+++|++ +
T Consensus 157 ---------------------------~~~~~L~~~-----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~ 203 (240)
T 3eu9_A 157 ---------------------------DPTRLLLTF-----NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-V 203 (240)
T ss_dssp ---------------------------TTHHHHHHT-----TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-T
T ss_pred ---------------------------HHHHHHHhc-----CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence 223333332 445555554 788999999999999999999999999 7
Q ss_pred cccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 434 WKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 434 ~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
+.+|..|+||||+|++.|+.+++++|++++++..
T Consensus 204 ~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 204 DAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 8999999999999999999999999999998754
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.3e-36 Score=303.87 Aligned_cols=211 Identities=18% Similarity=0.238 Sum_probs=182.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccc-cccCCCChHHHHHHHcCcHHHHHHHHhcC--CCCCccCCCCCCCHHHHH
Q 005095 198 QDTALHIAAGARRTLFVQELVNLMTPEDLA-LRNKVGNTALCFAAVSGVTKIAEVMVNKN--RELPSIRGNKGATPLCMA 274 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~-~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g--~~~~~~~d~~g~tpLh~A 274 (715)
|+||||+|+..|+.++|++|++ .+.++. .+|..|+||||+|+..|+.+++++|+++| .++....+..|.||||+|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLH--SKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHH--HCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHh--cCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 7899999999999999999999 566554 48899999999999999999999999999 555533788999999999
Q ss_pred HHcCCHHHHHHHHhcC--CCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCc
Q 005095 275 ALLGHKEMIWYLYSVT--KEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGS 352 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~g--a~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~ 352 (715)
+..|+.+++++|+++| ++++..+..|.||||.|+..|+.+++++|+++++++ +.+|..
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~------------------- 139 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKF------------------- 139 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTT-------------------
T ss_pred HHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCC-------------------
Confidence 9999999999999998 888888889999999999999999999999887774 444444
Q ss_pred chhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCC
Q 005095 353 QLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNL 432 (715)
Q Consensus 353 ~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~ 432 (715)
|.||||+|+..|+.+++++|+++|+..
T Consensus 140 -----------------------------------------------------g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 166 (228)
T 2dzn_A 140 -----------------------------------------------------NQIPLHRAASVGSLKLIELLCGLGKSA 166 (228)
T ss_dssp -----------------------------------------------------SCCHHHHHHHTTCHHHHHHHHTTTCCC
T ss_pred -----------------------------------------------------CCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 455556666667889999999999333
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHH-HcCcchhhhhcccCCCCchHHHHhhhh
Q 005095 433 IWKVDDHSRSMFHIAVVHRQEKIFNLIY-ELGAHKDLIASYKDENNNNMLHLAGKL 487 (715)
Q Consensus 433 ~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll-~~ga~~~~l~~~~d~~G~TpLh~A~~~ 487 (715)
++.+|..|+||||+|+..|+.+++++|+ ++|++++. +|..|+||||+|++.
T Consensus 167 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~----~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 167 VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL----VDNKGAKAEDVALNE 218 (228)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC----BCTTSCBGGGGCSST
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc----cCCCCCcHHHHHHHH
Confidence 8999999999999999999999999999 89999984 999999999999765
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.7e-37 Score=318.44 Aligned_cols=238 Identities=13% Similarity=0.064 Sum_probs=208.1
Q ss_pred cCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHH
Q 005095 173 KGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVM 252 (715)
Q Consensus 173 ~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~L 252 (715)
..+.+.++.+|..+ .++. .|.+|.||||+|+..|+.++|++|++ .|++++.+| |+||||+|+..|+.+++++|
T Consensus 9 ~~~~~~v~~lL~~~--~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~--g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 9 TWKSKQLKSFLSSK--DTFK-ADVHGHSASYYAIADNNVRLVCTLLN--AGALKNLLE--NEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp GCCHHHHHHHHHST--TTTC-CCTTSCCHHHHHHHTTCHHHHHHHHH--TTGGGSCCT--TCCHHHHHTTSSSCHHHHHH
T ss_pred hcCHHHHHHHHHhC--CCCc-cCCCCCCHHHHHHHcCCHHHHHHHHh--CCCCCCCCC--CCCHHHHHHHcCCHHHHHHH
Confidence 44455555566554 2444 48999999999999999999999999 899999884 99999999999999999999
Q ss_pred HhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccc-ccHHHHHHHcCChhHHHHHHhhCcccceecC
Q 005095 253 VNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDR-IELLVAVIDAGLYDVALDLIQHHPQLAMARD 331 (715)
Q Consensus 253 l~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g-~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d 331 (715)
+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|++++++..+ .
T Consensus 82 l~~ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~ 158 (285)
T 3kea_A 82 LFSGLDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--L 158 (285)
T ss_dssp HHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--C
T ss_pred HHCCCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--c
Confidence 99999986 789999999999999999999999999999999999999 8999999999999999999999987521 1
Q ss_pred CCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchH-H
Q 005095 332 GNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRL-L 410 (715)
Q Consensus 332 ~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~-L 410 (715)
..|+||||+|+..|+ .+++++|+++ +++++.++..|.|| |
T Consensus 159 ~~g~t~L~~A~~~g~----------------------------------~~~v~~Ll~~-----gad~n~~~~~g~t~~L 199 (285)
T 3kea_A 159 AILLSCIHITIKNGH----------------------------------VDMMILLLDY-----MTSTNTNNSLLFIPDI 199 (285)
T ss_dssp STHHHHHHHHHHTTC----------------------------------HHHHHHHHHH-----HHHTCTTCCCBCCTTH
T ss_pred cCCccHHHHHHHcCh----------------------------------HHHHHHHHHc-----CCCCCcccCCCCChHH
Confidence 389999999999887 3788888887 45567778889997 9
Q ss_pred HHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 411 FTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 411 h~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
|+|+..|+.+++++|+++|++ ++.+| +.|+..|+.+++++|+++|++++
T Consensus 200 ~~A~~~~~~~~v~~Ll~~gad-~~~~~-------~~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 200 KLAIDNKDIEMLQALFKYDIN-IYSAN-------LENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHTCHHHHHHHTTSCBC-STTTT-------GGGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCCC-------hhhhhcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999999 66666 36788999999999999999876
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2e-36 Score=303.11 Aligned_cols=215 Identities=16% Similarity=0.151 Sum_probs=191.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
+..+.||||.|+..|+.+.++.|++. .+..++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN-DKDDAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHH-CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHh-chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC-CcCCCCCCHHHHH
Confidence 45688999999999999999999985 455678889999999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcch
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQL 354 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 354 (715)
+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|++++.+. +.+|.
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~---------------------- 137 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDH---------------------- 137 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT----------------------
T ss_pred HHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC----------------------
Confidence 9999999999999999999999999999999999999999999999887764 33333
Q ss_pred hhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCcc
Q 005095 355 GFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIW 434 (715)
Q Consensus 355 ~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~ 434 (715)
.|.||||+|+..|+.+++++|+++|++ ++
T Consensus 138 --------------------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~ 166 (231)
T 3aji_A 138 --------------------------------------------------YDATAMHRAAAKGNLKMVHILLFYKAS-TN 166 (231)
T ss_dssp --------------------------------------------------TSCCHHHHHHHHTCHHHHHHHHHTTCC-SC
T ss_pred --------------------------------------------------CCCcHHHHHHHcCCHHHHHHHHhcCCC-cc
Confidence 456667777777889999999999999 78
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCC
Q 005095 435 KVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAP 489 (715)
Q Consensus 435 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~ 489 (715)
.+|..|+||||+|+..++.+++++|+++|++++. +|..|+||||+|++.++
T Consensus 167 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 167 IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI----ENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC----CCTTSCCHHHHSCHHHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----CCCCCCCHHHHHHhhHH
Confidence 8999999999999999999999999999999884 99999999999987754
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.6e-36 Score=300.62 Aligned_cols=217 Identities=20% Similarity=0.219 Sum_probs=187.6
Q ss_pred CCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHH
Q 005095 174 GDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMV 253 (715)
Q Consensus 174 g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll 253 (715)
|+.+++++|++.+.... ...|.+|.||||+|+..|+.++|++|++ .|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLE--ASADANIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcc-cccCCCCCchHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 67788888888766544 3348899999999999999999999999 89999999999999999999999999999999
Q ss_pred hcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCC
Q 005095 254 NKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGN 333 (715)
Q Consensus 254 ~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~ 333 (715)
++++.....++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++++++ +.+|..
T Consensus 79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 157 (223)
T 2f8y_A 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNR 157 (223)
T ss_dssp HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9998444578999999999999999999999999999999999999999999999999999999999988764 444444
Q ss_pred CCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHH
Q 005095 334 GETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTA 413 (715)
Q Consensus 334 g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A 413 (715)
|.||||+|
T Consensus 158 ------------------------------------------------------------------------g~t~L~~A 165 (223)
T 2f8y_A 158 ------------------------------------------------------------------------EETPLFLA 165 (223)
T ss_dssp ------------------------------------------------------------------------CCCHHHHH
T ss_pred ------------------------------------------------------------------------CcCHHHHH
Confidence 45566666
Q ss_pred HHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 414 VELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 414 ~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
++.|+.+++++|+++|++ ++.+|..|+||||+|+++++.+++++|+++|+...
T Consensus 166 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 166 AREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHcCCHHHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 667788999999999999 78889999999999999999999999999998754
No 35
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-38 Score=331.19 Aligned_cols=205 Identities=14% Similarity=0.108 Sum_probs=130.6
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCC---h
Q 005095 237 LCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL---Y 313 (715)
Q Consensus 237 Lh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~---~ 313 (715)
+|+|+..+..+++++|++.|++++..+|..|.||||+|+..|+.++|++|+++|++++.+|.+|.||||+|+..|+ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 4556666666666666666666652256666666666666666666666666666666666666666666666665 5
Q ss_pred hHHHHHHhhCcccceecCCCCCCHHHHHHh----CCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHH
Q 005095 314 DVALDLIQHHPQLAMARDGNGETALHVLAR----KPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWE 389 (715)
Q Consensus 314 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~----~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~ 389 (715)
++++.|++.+...++.+|..|+||||+|+. .|+ . ++++.|++
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~-------~---------------------------~~v~~Ll~ 226 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC-------S---------------------------AAAKYYLD 226 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTC-------H---------------------------HHHHHHHH
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccccc-------H---------------------------HHHHHHHH
Confidence 556666665533345666666666666665 332 2 22233322
Q ss_pred HHH---------------hcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHhCCHH
Q 005095 390 QVL---------------LLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEK 454 (715)
Q Consensus 390 ~~l---------------~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~~~~ 454 (715)
.+. ...+.+++.++..|.||||.|+. +++|+++ + ++.+|..|+||||+|+.+|+.+
T Consensus 227 ~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~-~n~~d~~G~TpLh~A~~~g~~~ 297 (327)
T 1sw6_A 227 ILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--M-LNAQDSNGDTCLNIAARLGNIS 297 (327)
T ss_dssp HHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--T-TTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--C-CCCCCCCCCCHHHHHHHcCCHH
Confidence 211 12367788889999999999996 8999998 3 6788999999999999999999
Q ss_pred HHHHHHHcCcchhhhhcccCCCCchHHHHhhhhC
Q 005095 455 IFNLIYELGAHKDLIASYKDENNNNMLHLAGKLA 488 (715)
Q Consensus 455 iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~ 488 (715)
++++|+++|++++. +|..|+||||+|++.|
T Consensus 298 ~v~~Ll~~Gad~~~----~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 298 IVDALLDYGADPFI----ANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHTTCCTTC----CCTTSCCGGGGTCC--
T ss_pred HHHHHHHcCCCCcc----cCCCCCCHHHHHHhcC
Confidence 99999999999984 9999999999999764
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=291.42 Aligned_cols=230 Identities=17% Similarity=0.143 Sum_probs=206.3
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccC-CCCh
Q 005095 157 ERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNK-VGNT 235 (715)
Q Consensus 157 ~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~-~G~T 235 (715)
+..|..|.||||.|+..|+.+++++|++.+.+ ++.. +..|.||||+|+..|+.++|++|++ .|.+++..+. .|.|
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYD-VRQP-DKENVTLLHWAAINNRIDLVKYYIS--KGAIVDQLGGDLNST 78 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCBTTTTBC
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCC-cCCC-CCCCCCHHHHHHHhCCHHHHHHHHH--cCCcchhhcCCcCCC
Confidence 45577788999999999999999999987644 4443 8899999999999999999999999 7888876554 5999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCC-hh
Q 005095 236 ALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL-YD 314 (715)
Q Consensus 236 pLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~-~~ 314 (715)
|||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..++ .+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHH
Confidence 9999999999999999999999986 789999999999999999999999999999999999999999999997766 89
Q ss_pred HHHHHHhhCcccceecCC-CCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHh
Q 005095 315 VALDLIQHHPQLAMARDG-NGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLL 393 (715)
Q Consensus 315 iv~~Ll~~~~~~~~~~d~-~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~ 393 (715)
++++|++.++++ +..+. .|.||||+|+..++ .+++++|++.
T Consensus 158 ~~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~~----------------------------------~~~v~~Ll~~--- 199 (240)
T 3eu9_A 158 PTRLLLTFNVSV-NLGDKYHKNTALHWAVLAGN----------------------------------TTVISLLLEA--- 199 (240)
T ss_dssp THHHHHHTTCCT-TCCCTTTCCCHHHHHHHHTC----------------------------------HHHHHHHHHH---
T ss_pred HHHHHHhcCCCc-chhhccCCCcHHHHHHHcCC----------------------------------HHHHHHHHHc---
Confidence 999999999996 66665 89999999999886 3777888776
Q ss_pred cCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCC
Q 005095 394 LDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPN 431 (715)
Q Consensus 394 ~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d 431 (715)
+.+++.++..|.||||+|++.|+.+++++|++++++
T Consensus 200 --g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 200 --GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp --TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred --CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 677788889999999999999999999999999887
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-35 Score=307.60 Aligned_cols=268 Identities=16% Similarity=0.178 Sum_probs=216.4
Q ss_pred HHHHcCCHHHHHHHHhcCCCcccc---------cccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 204 IAAGARRTLFVQELVNLMTPEDLA---------LRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 204 ~Aa~~g~~~iv~~Ll~~~~g~~i~---------~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
.++..++.+.++.++. ...++. ..+..|.||||.|+..|+.++|++|+++|++++ .+|..|.||||+|
T Consensus 4 ~~a~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 80 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIG--SETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADIN-YANVDGLTALHQA 80 (299)
T ss_dssp HHHHHHHHHHHHHHHH--TTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTT-CBCTTCCBHHHHH
T ss_pred hHHHHHHHHHHHHHHc--cccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHH
Confidence 5777888888888887 343322 234568899999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcch
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQL 354 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 354 (715)
+..|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|+++++++ +..|.+|.||||+|+..++ .
T Consensus 81 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~-------~ 152 (299)
T 1s70_B 81 CIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAM-------E 152 (299)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHH-------H
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcch-------H
Confidence 9999999999999999999999999999999999999999999999999986 7889999999999987643 1
Q ss_pred hhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCcc
Q 005095 355 GFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIW 434 (715)
Q Consensus 355 ~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~ 434 (715)
++++.++.. .+.+++..+..+.++++ ..++.++..+.....
T Consensus 153 ---------------------------~~~~~ll~~----~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 153 ---------------------------ELLQNEVNR----QGVDIEAARKEEERIML--------RDARQWLNSGHINDV 193 (299)
T ss_dssp ---------------------------HHHHHHHHH----HTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCC
T ss_pred ---------------------------HHHHHHHhh----cCCCchhhhhhhhhHHH--------HHHHHHHhccCcchh
Confidence 333333332 23333332223333333 345567777776667
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCCCCccccCCCchhhhHHHhhhHHHHH
Q 005095 435 KVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFKEIE 514 (715)
Q Consensus 435 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~~l~l~~ga~~~~~~~l~~~~~v~ 514 (715)
..+..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.+ .++
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~----~d~~g~tpL~~A~~~~~~~--------------------~v~ 249 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI----KDYDGWTPLHAAAHWGKEE--------------------ACR 249 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC----CCTTCCCHHHHHHHTTCHH--------------------HHH
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC----cCCCCCcHHHHHHhcCCHH--------------------HHH
Confidence 7789999999999999999999999999999984 9999999999999998743 344
Q ss_pred Hhhc-chhHhhhhcCCCCchhhhHHHhhHhhh
Q 005095 515 KVVQ-PSYREAKNSEGRTPHILFSEEHRRLVR 545 (715)
Q Consensus 515 ~ll~-~~~~~~~n~~G~Tpl~~a~~~~~~~~~ 545 (715)
.+++ +.+++.+|..|+||+++|.++..+.++
T Consensus 250 ~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~ 281 (299)
T 1s70_B 250 ILVENLCDMEAVNKVGQTAFDVADEDILGYLE 281 (299)
T ss_dssp HHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 4444 556799999999999999876554443
No 38
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.2e-34 Score=300.36 Aligned_cols=210 Identities=12% Similarity=0.149 Sum_probs=185.9
Q ss_pred CHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 005095 210 RTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSV 289 (715)
Q Consensus 210 ~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ 289 (715)
..+++++|.+ . +++.+|.+|+||||+|+..|+.+++++|+++|++++ .+ +|.||||+|+..|+.+++++|+++
T Consensus 12 ~~~v~~lL~~--~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~--~g~t~L~~A~~~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 12 SKQLKSFLSS--K--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN-LL--ENEFPLHQAATLEDTKIVKILLFS 84 (285)
T ss_dssp HHHHHHHHHS--T--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS-CC--TTCCHHHHHTTSSSCHHHHHHHHT
T ss_pred HHHHHHHHHh--C--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CC--CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3455555544 3 689999999999999999999999999999999986 34 499999999999999999999999
Q ss_pred CCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCC-CCHHHHHHhCCCCcccCcchhhHhhhhhcCCcch
Q 005095 290 TKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNG-ETALHVLARKPSAFASGSQLGFWRRCIYSVPGMR 368 (715)
Q Consensus 290 ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g-~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~ 368 (715)
|++++.++..|.||||+|+..|+.+++++|+++|+++ +.+|..| .||||+|+..|+
T Consensus 85 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~---------------------- 141 (285)
T 3kea_A 85 GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLND---------------------- 141 (285)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTC----------------------
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCC----------------------
Confidence 9999999999999999999999999999999999996 8899999 799999999986
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcH-HHHH
Q 005095 369 AILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSM-FHIA 447 (715)
Q Consensus 369 ~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~-Lh~A 447 (715)
.+++++|++.+. +.... ..|.||||+|+..|+.+++++|+++|++ ++.+|..|+|| ||+|
T Consensus 142 ------------~~~v~~Ll~~g~-----~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 142 ------------VSIVSYFLSEIP-----STFDL-AILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLA 202 (285)
T ss_dssp ------------HHHHHHHHTTSC-----TTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHH-TCTTCCCBCCTTHHHH
T ss_pred ------------HHHHHHHHhCCC-----ccccc-cCCccHHHHHHHcChHHHHHHHHHcCCC-CCcccCCCCChHHHHH
Confidence 366666665532 22111 2789999999999999999999999999 88999999998 9999
Q ss_pred HHhCCHHHHHHHHHcCcchhh
Q 005095 448 VVHRQEKIFNLIYELGAHKDL 468 (715)
Q Consensus 448 ~~~~~~~iv~~Ll~~ga~~~~ 468 (715)
+.+|+.+++++|+++|++++.
T Consensus 203 ~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 203 IDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp HHHTCHHHHHHHTTSCBCSTT
T ss_pred HHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999884
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=7.6e-34 Score=284.64 Aligned_cols=197 Identities=20% Similarity=0.211 Sum_probs=137.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCC----ccCCCCCCCHHH
Q 005095 197 NQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELP----SIRGNKGATPLC 272 (715)
Q Consensus 197 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~----~~~d~~g~tpLh 272 (715)
.|+||||+|+..|+.++|++|++. .|++++.+|..|+||||+|+..|+.+++++|+++|+++. ..+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKF-EGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTT-TCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 467777777777777777777772 377777777777777777777777777777777776642 245667777777
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCcccc-------------ccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHH
Q 005095 273 MAALLGHKEMIWYLYSVTKEEDLKEE-------------DRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALH 339 (715)
Q Consensus 273 ~A~~~g~~~iv~~Ll~~ga~~~~~~~-------------~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 339 (715)
+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|+++ +.+|.+|+||||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~ 159 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLH 159 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 77777777777777777777776654 4556666666666666666666555553 444555555555
Q ss_pred HHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCH
Q 005095 340 VLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNV 419 (715)
Q Consensus 340 ~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 419 (715)
+|+. .|+.
T Consensus 160 ~A~~------------------------------------------------------------------------~~~~ 167 (232)
T 2rfa_A 160 ILIL------------------------------------------------------------------------QPNK 167 (232)
T ss_dssp HHHT------------------------------------------------------------------------CSCH
T ss_pred HHHH------------------------------------------------------------------------cCCh
Confidence 5554 4444
Q ss_pred HHH----HHHHHhCCCCc-----cccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 420 EFL----MVLIQMYPNLI-----WKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 420 eiv----~~Ll~~~~d~~-----~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
+++ ++|+++|++.. +.+|..|+||||+|+++|+.+++++|+++|.+..
T Consensus 168 ~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 168 TFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 444 78888887743 5788899999999999999999999999887654
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.8e-34 Score=285.87 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=150.1
Q ss_pred CCHHHHHHHHhcCCCcccccc-cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 005095 209 RRTLFVQELVNLMTPEDLALR-NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLY 287 (715)
Q Consensus 209 g~~~iv~~Ll~~~~g~~i~~~-d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 287 (715)
|+.+++++|++ .|++++.. |..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~--~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIY--QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEE--TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHH--cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 55666666666 56666554 5666666666666666666666666666664 56666666666666666666666666
Q ss_pred hcCC-CCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCc
Q 005095 288 SVTK-EEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPG 366 (715)
Q Consensus 288 ~~ga-~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~ 366 (715)
++++ +++..+..|.||||+|+..|+.+++++|+++++++
T Consensus 79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------------------------------------- 118 (223)
T 2f8y_A 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV---------------------------------------- 118 (223)
T ss_dssp HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----------------------------------------
T ss_pred HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC----------------------------------------
Confidence 6665 56666666666666666666666666666655543
Q ss_pred chhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHH
Q 005095 367 MRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHI 446 (715)
Q Consensus 367 ~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~ 446 (715)
+..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 119 ---------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 164 (223)
T 2f8y_A 119 ---------------------------------NAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFL 164 (223)
T ss_dssp ---------------------------------TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred ---------------------------------cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHH
Confidence 33344566777777778889999999999999 78899999999999
Q ss_pred HHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCCCC
Q 005095 447 AVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPD 491 (715)
Q Consensus 447 A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~ 491 (715)
|+..|+.+++++|+++|++++. +|..|+||||+|++.++.+
T Consensus 165 A~~~~~~~~v~~Ll~~ga~~~~----~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 165 AAREGSYETAKVLLDHFANRDI----TDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC----CCTTCCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcc----ccccCCCHHHHHHHhcchH
Confidence 9999999999999999999984 8999999999999998754
No 41
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-35 Score=311.22 Aligned_cols=248 Identities=11% Similarity=0.047 Sum_probs=195.5
Q ss_pred ccccCCCCCCcccccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhc---------------cCCCCCcHHHHHHHc
Q 005095 144 VSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVR---------------ISRNQDTALHIAAGA 208 (715)
Q Consensus 144 ~~l~~~G~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~---------------~d~~g~TpLh~Aa~~ 208 (715)
.++.+.|+ +++..+..|.|+++ |+.++|+.||+++....... ......+.+|.|+..
T Consensus 36 ~~ll~~ga---~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~ 107 (327)
T 1sw6_A 36 SDFLSSPL---KIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDS 107 (327)
T ss_dssp CSTTTSSC---CCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHH
T ss_pred HHHhhCCc---ccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHh
Confidence 34667787 45666778899988 99999999998764321100 011122346888988
Q ss_pred CCHHHHHHHHhcCCCccccc-ccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC---HHHHH
Q 005095 209 RRTLFVQELVNLMTPEDLAL-RNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH---KEMIW 284 (715)
Q Consensus 209 g~~~iv~~Ll~~~~g~~i~~-~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~---~~iv~ 284 (715)
+..+++++|++ .|+++|. +|..|+||||+|+..|+.++|++|+++|++++ .+|..|.||||+|+..|+ .++++
T Consensus 108 ~~~~~~~~l~~--~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~ 184 (327)
T 1sw6_A 108 LLQEVNDAFPN--TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFE 184 (327)
T ss_dssp HHHHHHHHCTT--SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHH
T ss_pred hHHHHHHHHHh--cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHH
Confidence 99999999999 8999999 89999999999999999999999999999997 899999999999999999 78889
Q ss_pred HHHhcC-CCCCccccccccHHHHHHH----cCChhHHHHHHhh--------------------CcccceecCCCCCCHHH
Q 005095 285 YLYSVT-KEEDLKEEDRIELLVAVID----AGLYDVALDLIQH--------------------HPQLAMARDGNGETALH 339 (715)
Q Consensus 285 ~Ll~~g-a~~~~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~g~tpLh 339 (715)
.|++.+ ++++.++..|.||||+|+. .|+.+++++|++. ++++ +.++..|+||||
T Consensus 185 ~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~ 263 (327)
T 1sw6_A 185 ALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSIL 263 (327)
T ss_dssp HHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHH
T ss_pred HHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhH
Confidence 999887 7899999999999999999 8999999999988 4443 667777778887
Q ss_pred HHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCH
Q 005095 340 VLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNV 419 (715)
Q Consensus 340 ~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 419 (715)
.|+. +++|++. +++.+|..|+||||+|++.|+.
T Consensus 264 ~a~~----------------------------------------~~~Ll~~-------~~n~~d~~G~TpLh~A~~~g~~ 296 (327)
T 1sw6_A 264 ENLD----------------------------------------LKWIIAN-------MLNAQDSNGDTCLNIAARLGNI 296 (327)
T ss_dssp HHCS----------------------------------------HHHHHHH-------TTTCCCTTSCCHHHHHHHHCCH
T ss_pred HHHH----------------------------------------HHHHHHh-------CCCCCCCCCCCHHHHHHHcCCH
Confidence 7763 3455544 4677889999999999999999
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHHhC
Q 005095 420 EFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHR 451 (715)
Q Consensus 420 eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~~ 451 (715)
++|++|+++|++ ++.+|..|+||||+|+++|
T Consensus 297 ~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 297 SIVDALLDYGAD-PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCGGGGTCC--
T ss_pred HHHHHHHHcCCC-CcccCCCCCCHHHHHHhcC
Confidence 999999999999 8999999999999998765
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.2e-35 Score=295.66 Aligned_cols=217 Identities=16% Similarity=0.195 Sum_probs=144.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcC--CCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLM--TPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLC 272 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~--~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh 272 (715)
|.+|+||||+|+..|+.+++++|++.. .+++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~ 83 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE-LRDFRGNTPLH 83 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-CCCTTCCCHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHH
Confidence 556666666666666666666666521 112566666666666666666666666666666666664 56666666666
Q ss_pred HHHHcCCHHHHHHHHhcCCC------CCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 273 MAALLGHKEMIWYLYSVTKE------EDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 273 ~A~~~g~~~iv~~Ll~~ga~------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|+++ +.++.
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-------------- 148 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEP-------------- 148 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT--------------
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC--------------
Confidence 66666666666666666654 2334445555555555555555555555555443 22222
Q ss_pred CcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHH
Q 005095 347 AFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLI 426 (715)
Q Consensus 347 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll 426 (715)
..|.||||+|+..|+.+++++|+
T Consensus 149 ---------------------------------------------------------~~g~tpL~~A~~~~~~~~v~~Ll 171 (236)
T 1ikn_D 149 ---------------------------------------------------------CNGRTALHLAVDLQNPDLVSLLL 171 (236)
T ss_dssp ---------------------------------------------------------TTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------------------------------------------------------CCCCCHHHHHHHcCCHHHHHHHH
Confidence 14556666666777888999999
Q ss_pred HhCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhh
Q 005095 427 QMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKL 487 (715)
Q Consensus 427 ~~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~ 487 (715)
++|++ ++.+|..|+||||+|+.+|+.+++++|+++|++... ..++.+|.||.+.+...
T Consensus 172 ~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~--~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 172 KCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQ--MLPESEDEESYDTESEF 229 (236)
T ss_dssp TTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGS--SCCCCCTTTCCCCC---
T ss_pred HcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhh--cCCccchHHHHhhhccc
Confidence 99998 788899999999999999999999999999998763 34889999998887654
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.7e-35 Score=292.89 Aligned_cols=184 Identities=18% Similarity=0.155 Sum_probs=159.6
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhhCcc---chhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC
Q 005095 157 ERNCFTSYAPLHLAALKGDWDFARNFFNLNPE---AVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVG 233 (715)
Q Consensus 157 ~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~---~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G 233 (715)
+..|.+|+||||+|+..|+.+++++|++.... .++. .|..|.||||+|+..|+.++|++|++ .|++++.+|..|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g 78 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNF-QNNLQQTPLHLAVITNQPEIAEALLG--AGCDPELRDFRG 78 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCC-CCTTCCCHHHHHHHTTCHHHHHCCCS--CCCCSCCCCTTC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCC
Confidence 45678899999999999999999999987654 3444 48899999999999999999999999 899999999999
Q ss_pred ChHHHHHHHcCcHHHHHHHHhcCCCC-----CccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccc-ccccHHHHH
Q 005095 234 NTALCFAAVSGVTKIAEVMVNKNREL-----PSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEE-DRIELLVAV 307 (715)
Q Consensus 234 ~TpLh~Aa~~g~~~iv~~Ll~~g~~~-----~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~L~~A 307 (715)
.||||+|+..|+.+++++|+++|++. ....+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA 158 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999752 346788999999999999999999999999999999998 999999999
Q ss_pred HHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhC
Q 005095 308 IDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARK 344 (715)
Q Consensus 308 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 344 (715)
+..|+.+++++|+++|+++ +.+|..|+||||+|+..
T Consensus 159 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHTTCHHHHHHHHTTTCCS-CCCCTTCCCGGGGCTTS
T ss_pred HHcCCHHHHHHHHHcCCCC-CcccCCCCCHHHHHHcc
Confidence 9999999999999999885 67777777776666543
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.6e-33 Score=278.30 Aligned_cols=181 Identities=20% Similarity=0.203 Sum_probs=167.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-----ccccCCCChH
Q 005095 162 TSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDL-----ALRNKVGNTA 236 (715)
Q Consensus 162 ~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i-----~~~d~~G~Tp 236 (715)
.|+||||+|+..|+.+++++|++..+.+++.+ |..|+||||+|+..|+.++|++|++ .|+++ +.+|..|.||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQR-GAMGETALHIAALYDNLEAAMVLME--AAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--HCGGGGGCCCCSTTTTTCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHH--cCchhccccccccCCCCcCH
Confidence 47899999999999999999998866677665 8999999999999999999999999 78876 6778899999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCCCccCCC-------------CCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccH
Q 005095 237 LCFAAVSGVTKIAEVMVNKNRELPSIRGN-------------KGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIEL 303 (715)
Q Consensus 237 Lh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~-------------~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 303 (715)
||+|+..|+.+++++|+++|++++ .++. .|.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~ 157 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVS-ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTV 157 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCC-cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 999999999999999999999986 4443 79999999999999999999999999999999999999
Q ss_pred HHHHHHcCChhHH----HHHHhhCcccc-----eecCCCCCCHHHHHHhCCC
Q 005095 304 LVAVIDAGLYDVA----LDLIQHHPQLA-----MARDGNGETALHVLARKPS 346 (715)
Q Consensus 304 L~~A~~~g~~~iv----~~Ll~~~~~~~-----~~~d~~g~tpLh~A~~~~~ 346 (715)
||+|+..|+.+++ ++|++.+++.. +.+|..|+||||+|+..|+
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 9999999999988 99999998753 5789999999999999987
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.7e-33 Score=270.74 Aligned_cols=198 Identities=18% Similarity=0.180 Sum_probs=148.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHH
Q 005095 196 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAA 275 (715)
Q Consensus 196 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~ 275 (715)
..+.||||.|+..|+.+.++.|++. .+.+++.+|.+|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQD-TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN-LQNSISDSPYLYAG 80 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTC-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH
Confidence 4566777777777777777777773 334777777777777777777777777777777777765 56777777777777
Q ss_pred HcCCHHHHHHHH-hcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcch
Q 005095 276 LLGHKEMIWYLY-SVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQL 354 (715)
Q Consensus 276 ~~g~~~iv~~Ll-~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 354 (715)
..|+.+++++|+ ..+++++..+..|.||||.|+..|+.+++++|+++++..++.+|..|+||||+|+..++.
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~------- 153 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG------- 153 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCC-------
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccc-------
Confidence 777777777777 445577777777777777777777777777777777333467777788888877765431
Q ss_pred hhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCcc
Q 005095 355 GFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIW 434 (715)
Q Consensus 355 ~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~ 434 (715)
..++.+++++|+++|++ ++
T Consensus 154 ------------------------------------------------------------~~~~~~~v~~Ll~~ga~-~~ 172 (201)
T 3hra_A 154 ------------------------------------------------------------NQLYQDIVKLLMENGAD-QS 172 (201)
T ss_dssp ------------------------------------------------------------SHHHHHHHHHHHHTTCC-TT
T ss_pred ------------------------------------------------------------hhhHHHHHHHHHHCCCC-CC
Confidence 01247889999999999 78
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q 005095 435 KVDDHSRSMFHIAVVHRQEKIFNLIYELG 463 (715)
Q Consensus 435 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 463 (715)
.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 173 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 173 IKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred ccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 88999999999999999999999999876
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.4e-33 Score=287.39 Aligned_cols=203 Identities=17% Similarity=0.133 Sum_probs=146.6
Q ss_pred CCcHHHHHHHcCCHH----HHHHHHhcCCCccccc----ccCCCChHHHHHHHc---CcHHHHHHHHhcCCCCCcc----
Q 005095 198 QDTALHIAAGARRTL----FVQELVNLMTPEDLAL----RNKVGNTALCFAAVS---GVTKIAEVMVNKNRELPSI---- 262 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~----iv~~Ll~~~~g~~i~~----~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~---- 262 (715)
|+||||.|+..|+.+ ++++|++ .|++++. +|..|+||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~--~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRW--NSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHH--HTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHH--cCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 567777777777775 4455555 5677776 677777777777777 7777777777776654311
Q ss_pred ------CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccc-------------cccHHHHHHHcCChhHHHHHHh--
Q 005095 263 ------RGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEED-------------RIELLVAVIDAGLYDVALDLIQ-- 321 (715)
Q Consensus 263 ------~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~-------------g~t~L~~A~~~g~~~iv~~Ll~-- 321 (715)
+|..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2356788888888888888888888888888777765 7778888887778888888887
Q ss_pred -hCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCccccc
Q 005095 322 -HHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIG 400 (715)
Q Consensus 322 -~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~ 400 (715)
+|+++ +.+|.+|+||||+|+..++. . .+..+
T Consensus 160 ~~ga~~-n~~d~~g~TpLh~A~~~~~~-----~---------------------------~~~~~--------------- 191 (256)
T 2etb_A 160 HQPASL-EATDSLGNTVLHALVMIADN-----S---------------------------PENSA--------------- 191 (256)
T ss_dssp SCCCCT-TCCCTTSCCHHHHHHHHCCS-----C---------------------------HHHHH---------------
T ss_pred ccCCCc-CccCCCCCCHHHHHHHcccC-----C---------------------------chhhH---------------
Confidence 66664 67777777777777762210 0 00000
Q ss_pred ccccCCchHHHHHHHcCCHHHHHHHHHhCCCCc-------cccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 401 ELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLI-------WKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 401 ~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~-------~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
+ ..+++++|+++|++ + +.+|..|+||||+|+..|+.+++++|+++|.+..
T Consensus 192 ---------~-------~~~iv~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 192 ---------L-------VIHMYDGLLQMGAR-LCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp ---------H-------HHHHHHHHHHHHHH-HSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---------H-------HHHHHHHHHHcCCC-cccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 0 03488888888888 5 7889999999999999999999999999988765
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.8e-32 Score=263.99 Aligned_cols=181 Identities=19% Similarity=0.232 Sum_probs=169.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHH
Q 005095 161 FTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFA 240 (715)
Q Consensus 161 ~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~A 240 (715)
..+.||||.||..|+.+.++.|++.++.+++.. |.+|.||||+|+..|+.++|++|++ .|++++.+|..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~l~~A 79 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALID--RGADINLQNSISDSPYLYA 79 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCCCCCCCCHHHHH
Confidence 357799999999999999999999888677665 8999999999999999999999999 8999999999999999999
Q ss_pred HHcCcHHHHHHHHhcC-CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCCCccccccccHHHHHHHcCC-----h
Q 005095 241 AVSGVTKIAEVMVNKN-RELPSIRGNKGATPLCMAALLGHKEMIWYLYSVT-KEEDLKEEDRIELLVAVIDAGL-----Y 313 (715)
Q Consensus 241 a~~g~~~iv~~Ll~~g-~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~g-a~~~~~~~~g~t~L~~A~~~g~-----~ 313 (715)
+..|+.+++++|++++ +++ +.++..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++ .
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDL-NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCT-TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHcCCHHHHHHHHhccCccc-ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence 9999999999999554 455 489999999999999999999999999999 9999999999999999999998 9
Q ss_pred hHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 314 DVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 314 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
+++++|+++|+++ +.+|..|+||||+|+..|+
T Consensus 159 ~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 159 DIVKLLMENGADQ-SIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCC-CccCCCCCCHHHHHHHcCC
Confidence 9999999999996 8899999999999999886
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=1.6e-32 Score=282.31 Aligned_cols=220 Identities=13% Similarity=0.087 Sum_probs=159.4
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHhh---Cccchh---hccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcc-
Q 005095 156 VERNCFTSYAPLHLAALKGDWDFARNFFNL---NPEAVC---VRISRNQDTALHIAAGA---RRTLFVQELVNLMTPED- 225 (715)
Q Consensus 156 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~---~~~~~~---~~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~g~~- 225 (715)
.+..|..|+||||.||..|+.++|+.|++. .+..++ ...|..|+||||+|+.. |+.++|++|++ .|++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~--~ga~~ 83 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLD--VARKT 83 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHH--HHHHT
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHH--hhccc
Confidence 345677889999999999999999988874 222221 13478899999999987 99999999999 6665
Q ss_pred ------ccc----ccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCC--------------CCCCHHHHHHHcCCHH
Q 005095 226 ------LAL----RNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGN--------------KGATPLCMAALLGHKE 281 (715)
Q Consensus 226 ------i~~----~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~--------------~g~tpLh~A~~~g~~~ 281 (715)
++. +|..|.||||+|+..|+.+++++|+++|++++ .++. .|.||||+|+..|+.+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 232 56789999999999999999999999999886 5555 7889999999999999
Q ss_pred HHHHHHh---cCCCCCccccccccHHHHHHHcCC---------hhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcc
Q 005095 282 MIWYLYS---VTKEEDLKEEDRIELLVAVIDAGL---------YDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFA 349 (715)
Q Consensus 282 iv~~Ll~---~ga~~~~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~ 349 (715)
++++|++ +|++++.+|.+|.||||+|+..|+ .+++++|+++|+++ +..
T Consensus 163 ~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~-n~~------------------- 222 (273)
T 2pnn_A 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKL-HPT------------------- 222 (273)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH-CTT-------------------
T ss_pred HHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhc-ccc-------------------
Confidence 9999999 889998888889999999888877 57777777776654 110
Q ss_pred cCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhC
Q 005095 350 SGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMY 429 (715)
Q Consensus 350 ~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~ 429 (715)
...++.+|..|.||||+|++.|+.+++++|+++|
T Consensus 223 ----------------------------------------------~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 223 ----------------------------------------------LKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp ----------------------------------------------CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 0001234567788888888888899999999999
Q ss_pred CCCccccCCCCCcHH
Q 005095 430 PNLIWKVDDHSRSMF 444 (715)
Q Consensus 430 ~d~~~~~d~~G~T~L 444 (715)
+.........+.+|-
T Consensus 257 a~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 257 IHEPECRHAAAHHHH 271 (273)
T ss_dssp TC-------------
T ss_pred CCCchhhhhhhhhcc
Confidence 854666666666654
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=1.2e-31 Score=254.25 Aligned_cols=157 Identities=25% Similarity=0.286 Sum_probs=146.8
Q ss_pred hHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcC
Q 005095 165 APLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSG 244 (715)
Q Consensus 165 T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g 244 (715)
++|+.||+.|+.++|+.||+.+. +++.+ |.+|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga-dvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~--~gad~~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA-DVNAS-DSDGRTPLHHAAENGHKEVVKLLIS--KGADVNAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC-CCCCc-CCCCCCHHHHHHHcCCHHHHHHHHh--cccchhhhccCCCCHHHHHHHcC
Confidence 58999999999999999998765 45554 8999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCc
Q 005095 245 VTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHP 324 (715)
Q Consensus 245 ~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~ 324 (715)
+.+++++|+++|++++ .+|.+|+||||+|+..|+.++|++|+++|++++.+|.+|.||||+|+..|+.+++++|+++|+
T Consensus 82 ~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 82 HKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp CHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999999999996 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 005095 325 QL 326 (715)
Q Consensus 325 ~~ 326 (715)
++
T Consensus 161 ~i 162 (169)
T 4gpm_A 161 WL 162 (169)
T ss_dssp --
T ss_pred Cc
Confidence 86
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.1e-32 Score=281.51 Aligned_cols=229 Identities=14% Similarity=0.130 Sum_probs=169.7
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCcccc----cccCCCChHHHHHHHc---CcHHHHHHHHhcCCCCCc---
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNLM--TPEDLA----LRNKVGNTALCFAAVS---GVTKIAEVMVNKNRELPS--- 261 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~--~g~~i~----~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~--- 261 (715)
.|..|+||||+|++.|+.++|+.|++.. .+++++ .+|..|+||||+|+.. |+.+++++|+++|++...
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 3788999999999999999888888621 355554 4578899999999976 899999999998765311
Q ss_pred -------cCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCC
Q 005095 262 -------IRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNG 334 (715)
Q Consensus 262 -------~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g 334 (715)
.+|..|.||||+|+..|+.++|++|+++|++++.++..+.. ...+ ....+..|
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~-------------------~~~~-~~~~~~~g 148 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF-------------------KKTK-GRPGFYFG 148 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG-------------------SSCS-SSCCCCSC
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc-------------------cccc-ccccccCC
Confidence 25668899999999999999999999999988888765511 0011 24456789
Q ss_pred CCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHH
Q 005095 335 ETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAV 414 (715)
Q Consensus 335 ~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~ 414 (715)
+||||+|+..|+ .+++++|++.. ..+.+++.+|..|.||||+|+
T Consensus 149 ~tpL~~A~~~g~----------------------------------~~~v~~Ll~~~--~~gad~~~~d~~g~tpLh~A~ 192 (273)
T 2pnn_A 149 ELPLSLAACTNQ----------------------------------LAIVKFLLQNS--WQPADISARDSVGNTVLHALV 192 (273)
T ss_dssp BSHHHHHHHTTC----------------------------------HHHHHHHHHCS--SCCCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCC----------------------------------HHHHHHHHhcc--cCCCCceeeCCCCCcHHHHHH
Confidence 999999999886 36667766510 036778888999999999999
Q ss_pred HcCC---------HHHHHHHHHhCCCCc------cccCCCCCcHHHHHHHhCCHHHHHHHHHcCc-chhhhhcccCCCCc
Q 005095 415 ELGN---------VEFLMVLIQMYPNLI------WKVDDHSRSMFHIAVVHRQEKIFNLIYELGA-HKDLIASYKDENNN 478 (715)
Q Consensus 415 ~~g~---------~eiv~~Ll~~~~d~~------~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga-~~~~l~~~~d~~G~ 478 (715)
..|+ .+++++|+++|+++. +.+|..|+||||+|+..|+.+++++|+++|+ |+.. ....+.
T Consensus 193 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~----~~~~~~ 268 (273)
T 2pnn_A 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC----RHAAAH 268 (273)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred HccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh----hhhhhh
Confidence 9988 899999999998832 3589999999999999999999999999999 6653 556666
Q ss_pred hHHH
Q 005095 479 NMLH 482 (715)
Q Consensus 479 TpLh 482 (715)
+|-|
T Consensus 269 ~~~~ 272 (273)
T 2pnn_A 269 HHHH 272 (273)
T ss_dssp ----
T ss_pred hccC
Confidence 5543
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.1e-31 Score=250.65 Aligned_cols=94 Identities=28% Similarity=0.374 Sum_probs=57.1
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH
Q 005095 201 ALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHK 280 (715)
Q Consensus 201 pLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~ 280 (715)
+|+.||+.|+.++|+.||+ .|+|+|.+|.+|+||||+|+..++.+++++|+++|++++ .+|.+|.||||+|+..|+.
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~--~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIE--NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-hhccCCCCHHHHHHHcCCH
Confidence 5666666666666666666 566666666666666666666666666666666666654 5566666666666666666
Q ss_pred HHHHHHHhcCCCCCccc
Q 005095 281 EMIWYLYSVTKEEDLKE 297 (715)
Q Consensus 281 ~iv~~Ll~~ga~~~~~~ 297 (715)
++|++|+++|+++|.+|
T Consensus 84 ~~v~~Ll~~gadvn~~d 100 (169)
T 4gpm_A 84 EVVKLLISKGADVNAKD 100 (169)
T ss_dssp HHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHCcCCCCCCC
Confidence 66666666555544333
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=7.2e-32 Score=274.66 Aligned_cols=181 Identities=16% Similarity=0.133 Sum_probs=160.5
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHhhCccchhh---ccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccc---
Q 005095 162 TSYAPLHLAALKGDWD----FARNFFNLNPEAVCV---RISRNQDTALHIAAGA---RRTLFVQELVNLMTPEDLAL--- 228 (715)
Q Consensus 162 ~g~T~Lh~Aa~~g~~~----~v~~LL~~~~~~~~~---~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~g~~i~~--- 228 (715)
.|+||||.||..|+.+ ++++|++.+. +++. ..|..|+||||+|+.. |+.++|++|++ .|++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~-~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~--~g~~~~~~~~ 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSK-YLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQ--IDKDSGNPKP 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTC-CTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHH--HHHHTTCSSC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCC-CcccccccCCCCCCCHHHHHHHccccchHHHHHHHHh--cCCcccchhh
Confidence 3789999999999998 4555555544 4444 2489999999999999 99999999999 7887763
Q ss_pred --------ccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCC-------------CCCHHHHHHHcCCHHHHHHHH
Q 005095 229 --------RNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNK-------------GATPLCMAALLGHKEMIWYLY 287 (715)
Q Consensus 229 --------~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~-------------g~tpLh~A~~~g~~~iv~~Ll 287 (715)
+|..|.||||+|+..|+.+++++|+++|++++ .++.. |.||||+|+..|+.+++++|+
T Consensus 78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 156 (256)
T 2etb_A 78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL 156 (256)
T ss_dssp GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 34789999999999999999999999999986 56665 999999999999999999999
Q ss_pred h---cCCCCCccccccccHHHHHHH--cCChh-------HHHHHHhhCcccc------eecCCCCCCHHHHHHhCCC
Q 005095 288 S---VTKEEDLKEEDRIELLVAVID--AGLYD-------VALDLIQHHPQLA------MARDGNGETALHVLARKPS 346 (715)
Q Consensus 288 ~---~ga~~~~~~~~g~t~L~~A~~--~g~~~-------iv~~Ll~~~~~~~------~~~d~~g~tpLh~A~~~~~ 346 (715)
+ +|++++.+|.+|.||||+|+. .++.+ ++++|+++|+++. +.+|..|+||||+|+..|+
T Consensus 157 ~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 157 ENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred hccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC
Confidence 9 999999999999999999999 88888 9999999998852 7889999999999999987
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.1e-31 Score=273.97 Aligned_cols=206 Identities=15% Similarity=0.054 Sum_probs=130.4
Q ss_pred CCCCcHHHHHHHcCCHHH----HHHHHhcCCCccccccc----CCCChHHHHHH---HcCcHHHHHHHHhcCCCC-----
Q 005095 196 RNQDTALHIAAGARRTLF----VQELVNLMTPEDLALRN----KVGNTALCFAA---VSGVTKIAEVMVNKNREL----- 259 (715)
Q Consensus 196 ~~g~TpLh~Aa~~g~~~i----v~~Ll~~~~g~~i~~~d----~~G~TpLh~Aa---~~g~~~iv~~Ll~~g~~~----- 259 (715)
..|+||||.|++.|+.+. +++|++ .+++++..+ ..|.||||+|+ +.|+.+++++|+++|++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLT--HKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHH--HTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHh--cCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 344555555555555552 333333 344444433 44555555555 445555555555554321
Q ss_pred -----CccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccc--------------cccccHHHHHHHcCChhHHHHHH
Q 005095 260 -----PSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKE--------------EDRIELLVAVIDAGLYDVALDLI 320 (715)
Q Consensus 260 -----~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~--------------~~g~t~L~~A~~~g~~~iv~~Ll 320 (715)
....|..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+|+..|+.+++++|+
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 11234466777777777777777777777777777666 46777777777777777777777
Q ss_pred h---hCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcc
Q 005095 321 Q---HHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDS 397 (715)
Q Consensus 321 ~---~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~ 397 (715)
+ .++++ +.+|.+|+||||+|+..++.. . +..
T Consensus 161 ~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~-----~---------------------------~~~------------- 194 (260)
T 3jxi_A 161 ENGHKQADL-RRQDSRGNTVLHALVAIADNT-----R---------------------------ENT------------- 194 (260)
T ss_dssp HCSSCCCCT-TCCCTTSCCHHHHHHHHCCSS-----H---------------------------HHH-------------
T ss_pred hccccCCCC-cccCCCCCcHHHHHHHhccCc-----h---------------------------hHH-------------
Confidence 7 66664 677788888888888654310 0 000
Q ss_pred cccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCc------cccCCCCCcHHHHHHHhCCHHHHHHHHHcCcchh
Q 005095 398 KIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLI------WKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKD 467 (715)
Q Consensus 398 ~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~------~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~ 467 (715)
....+++++|+++|+++. +.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 195 ------------------~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 195 ------------------KFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ------------------HHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 012467778888877721 6788999999999999999999999999988765
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.6e-30 Score=247.75 Aligned_cols=170 Identities=18% Similarity=0.165 Sum_probs=154.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV 242 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~ 242 (715)
+.||||.||..|+.+++++|++.++..++.. |..|.||||+|+..|+.++|++|++ .|++++.+|..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKP-DERGFTPLIWASAFGEIETVRFLLE--WGADPHILAKERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHH--HTCCTTCCCTTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCchhhcccCCCHHHHHHH
Confidence 4589999999999999999999887766664 8999999999999999999999999 799999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhh
Q 005095 243 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQH 322 (715)
Q Consensus 243 ~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 322 (715)
.|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp TTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 999999999999999986 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccceecCCCCCCH
Q 005095 323 HPQLAMARDGNGETA 337 (715)
Q Consensus 323 ~~~~~~~~d~~g~tp 337 (715)
+++. ..++..|.||
T Consensus 158 ~~~~-~~~~~~~~~p 171 (172)
T 3v30_A 158 ILKL-FQSNLVPADP 171 (172)
T ss_dssp HHHH-SCC-------
T ss_pred HHHH-hcccCCCCCC
Confidence 9986 6677777776
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.1e-30 Score=266.56 Aligned_cols=183 Identities=17% Similarity=0.150 Sum_probs=159.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHh----hCccchhhc---cCCCCCcHHHHHH---HcCCHHHHHHHHhcCCCcc----
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFN----LNPEAVCVR---ISRNQDTALHIAA---GARRTLFVQELVNLMTPED---- 225 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~----~~~~~~~~~---~d~~g~TpLh~Aa---~~g~~~iv~~Ll~~~~g~~---- 225 (715)
+..|+|+||.||..|+.+.++.|++ .+.. ++.. .|..|+||||+|+ ..|+.++|++|++ .|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~--~g~~~~~~ 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLD--IAEKTGNM 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHH--HHHHTTCH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHH--hcccccch
Confidence 3457899999999999997666665 4433 3322 2477999999999 7799999999999 5644
Q ss_pred -------cccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCC--------------CCCCCHHHHHHHcCCHHHHH
Q 005095 226 -------LALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRG--------------NKGATPLCMAALLGHKEMIW 284 (715)
Q Consensus 226 -------i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d--------------~~g~tpLh~A~~~g~~~iv~ 284 (715)
++.+|..|+||||+|+..|+.++|++|+++|++++ .++ ..|.||||+|+..|+.++|+
T Consensus 79 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 157 (260)
T 3jxi_A 79 REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVH 157 (260)
T ss_dssp HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHH
T ss_pred HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHHcCCHHHHH
Confidence 45556699999999999999999999999999987 566 68999999999999999999
Q ss_pred HHHh---cCCCCCccccccccHHHHHHHcCC---------hhHHHHHHhhCcccc------eecCCCCCCHHHHHHhCCC
Q 005095 285 YLYS---VTKEEDLKEEDRIELLVAVIDAGL---------YDVALDLIQHHPQLA------MARDGNGETALHVLARKPS 346 (715)
Q Consensus 285 ~Ll~---~ga~~~~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~~~~~~------~~~d~~g~tpLh~A~~~~~ 346 (715)
+|++ +|++++.+|..|.||||+|+..++ .+++++|+++|+++. +.+|.+|+||||+|+..|+
T Consensus 158 ~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 158 YLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 9999 999999999999999999999888 799999999998852 5789999999999999987
No 56
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=4.8e-32 Score=289.82 Aligned_cols=269 Identities=12% Similarity=0.054 Sum_probs=155.4
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchh-hccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc---cccccCC
Q 005095 157 ERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVC-VRISRNQDTALHIAAGARRTLFVQELVNLMTPED---LALRNKV 232 (715)
Q Consensus 157 ~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~-~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~---i~~~d~~ 232 (715)
...+.+++||||+||..|+.++|++|++.+..... ...+..|.||||+||..|+.++|++|++ +|++ .+..+.+
T Consensus 86 ~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~--~gad~~~~~i~~~~ 163 (376)
T 2aja_A 86 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE--LAPTEIMAMIQAEN 163 (376)
T ss_dssp HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH--SCTTTHHHHHSHHH
T ss_pred HHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh--CCCCccccccCCCC
Confidence 34455666777777777777777777766542110 0123456677777777777777777777 5653 1222222
Q ss_pred CChHHHHHHHcCcHHHHHHHHhcCCCCCc-cCCCCCCCHHHHHH-HcCCHHHHHHHHhcCCCCCccccccccHHHHHHHc
Q 005095 233 GNTALCFAAVSGVTKIAEVMVNKNRELPS-IRGNKGATPLCMAA-LLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDA 310 (715)
Q Consensus 233 G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~-~~d~~g~tpLh~A~-~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 310 (715)
.||||+|+..|+.++|++|+++|++++. ..|..|.||||+|+ ..|+.++|++|+++|+ .|.||||.|+.+
T Consensus 164 -~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~ 235 (376)
T 2aja_A 164 -YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEY 235 (376)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTT
T ss_pred -CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHC
Confidence 7777777777777777777777776541 15666777777777 7777777777777664 267777777777
Q ss_pred CChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHH
Q 005095 311 GLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQ 390 (715)
Q Consensus 311 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~ 390 (715)
|+.+++++|++++++. +..+ ++++.|+..|+...... .-.......++.++.+
T Consensus 236 g~~evv~lL~~~ga~~-~~~~----~~l~~A~~~g~~~vv~~----------------------~~~~~~~~~~~~li~~ 288 (376)
T 2aja_A 236 GEKYVNPFIARHVNRL-KEMH----DAFKLSNPDGVFDLVTK----------------------SECLQGFYMLRNLIRR 288 (376)
T ss_dssp TTTTHHHHHHHHHHHH-HHHH----TTTTTTSSSSCCCCSSH----------------------HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCccc-cccc----HHHHHHHHCCChhhhcH----------------------HhhhhhHHHHHHHHHc
Confidence 7777777777777664 3322 35666666664211100 0000011122222221
Q ss_pred HHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCC----ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCcch
Q 005095 391 VLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNL----IWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHK 466 (715)
Q Consensus 391 ~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~----~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~ 466 (715)
...+..+.+++|++.+..- .....+.+.||||+|+..|+.+++++|++.|.
T Consensus 289 -----------------------~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~-- 343 (376)
T 2aja_A 289 -----------------------NDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS-- 343 (376)
T ss_dssp -----------------------CCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH--
T ss_pred -----------------------chhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChH--
Confidence 1123467777777643210 11223467799999999999999999998763
Q ss_pred hhhhcccCCCCchHHHHhhhhCCCCc
Q 005095 467 DLIASYKDENNNNMLHLAGKLAPPDR 492 (715)
Q Consensus 467 ~~l~~~~d~~G~TpLh~A~~~~~~~~ 492 (715)
.+|..|+||+.+|-+.|+.+.
T Consensus 344 -----v~~~~~~~~~~~~~~~~~~~~ 364 (376)
T 2aja_A 344 -----VLALTKANNYYINETGGRLDL 364 (376)
T ss_dssp -----HHHSCC---------------
T ss_pred -----HHHHHHHhccccccccccccH
Confidence 267889999999998887653
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.5e-29 Score=245.75 Aligned_cols=163 Identities=15% Similarity=0.161 Sum_probs=153.4
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCh
Q 005095 156 VERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNT 235 (715)
Q Consensus 156 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~T 235 (715)
++.+|..|+||||+|+..|+.+++++|++.+. +++. .|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFD-KLED-KDIEGSTALIWAVKNNRLGIAEKLLS--KGSNVNTKDFSGKT 103 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC-CTTC-CCTTSCCHHHHHHHTTCHHHHHHHHH--HTCCTTCCCTTSCC
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc-cccc-ccccCccHHHHHHHcCCHHHHHHHHH--CCCCCCCCCCCCCc
Confidence 56688899999999999999999999998754 3444 38899999999999999999999999 79999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhH
Q 005095 236 ALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDV 315 (715)
Q Consensus 236 pLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~i 315 (715)
|||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 9999999999999999999999986 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhC
Q 005095 316 ALDLIQHH 323 (715)
Q Consensus 316 v~~Ll~~~ 323 (715)
+++|++.+
T Consensus 183 v~~Ll~~~ 190 (192)
T 2rfm_A 183 IKIFTEVR 190 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999875
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.3e-29 Score=237.41 Aligned_cols=160 Identities=18% Similarity=0.188 Sum_probs=151.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHH
Q 005095 162 TSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA 241 (715)
Q Consensus 162 ~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa 241 (715)
.|.||||.|+..|+.+++++|++.+.. ++.. |..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHT-DEEGFTPLMWAAAHGQIAVVEFLLQ--NGADPQLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCC-CCCCCCHHHHHHHCCCHHHHHHHHH--cCCCCCCcCCCCCcHHHHHH
Confidence 478999999999999999999988643 4444 8899999999999999999999999 89999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHh
Q 005095 242 VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQ 321 (715)
Q Consensus 242 ~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 321 (715)
..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 9999999999999999986 789999999999999999999999999999999999999999999999999999999999
Q ss_pred hCccc
Q 005095 322 HHPQL 326 (715)
Q Consensus 322 ~~~~~ 326 (715)
++++.
T Consensus 157 ~~~~~ 161 (167)
T 3v31_A 157 HLLKL 161 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=261.01 Aligned_cols=179 Identities=17% Similarity=0.184 Sum_probs=164.3
Q ss_pred ChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-ccccccCCCChHHHHHH-
Q 005095 164 YAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPE-DLALRNKVGNTALCFAA- 241 (715)
Q Consensus 164 ~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~-~i~~~d~~G~TpLh~Aa- 241 (715)
++++|.|+..|+.+.++.+++..........|.+|+||||+|+..|+.++|++|++ .|+ +++.+|..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~--~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLD--SGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TSCCCTTCCCTTSCCHHHHGGG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHH--CCCCcCCCCCCCCCCHHHHHHH
Confidence 47899999999999999998776554344458999999999999999999999999 787 99999999999999999
Q ss_pred ----HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHH
Q 005095 242 ----VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVAL 317 (715)
Q Consensus 242 ----~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~ 317 (715)
..++.+++++|++.|.+.. ..+..|.||||+|+..|+.++|++|+++|++++.+|.+|.||||+|+..|+.++++
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 6789999999999998775 78889999999999999999999999999999999999999999999999999999
Q ss_pred HHHh-hCcccceecCCCCCCHHHHHHhCCC
Q 005095 318 DLIQ-HHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 318 ~Ll~-~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
+|++ .++++ +.+|.+|+||||+|+..|+
T Consensus 234 ~Ll~~~gad~-~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 234 LLLAVPSCDI-SLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp HHHTSTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred HHHhcCCCCC-cCcCCCCCCHHHHHHHcCC
Confidence 9999 78775 8899999999999999886
No 60
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.1e-31 Score=286.99 Aligned_cols=259 Identities=15% Similarity=0.094 Sum_probs=168.1
Q ss_pred cccccccCCCCCC------------cccccCCCCCChHHHHHHHcCCHHHHHHHHhhCcc----chhhccCCCCCcHHHH
Q 005095 141 QPAVSLSQPGAVS------------GGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPE----AVCVRISRNQDTALHI 204 (715)
Q Consensus 141 ~~~~~l~~~G~~~------------~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~----~~~~~~d~~g~TpLh~ 204 (715)
+|++.|+..|+.. ...+..+..|+||||+||..|+.++|++|++.+++ .+.. .+ .||||+
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~---~~-~TpLh~ 169 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA---EN-YHAFRL 169 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH---HH-HHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCC---CC-CCHHHH
Confidence 5666666666532 12224455688999999999999999999988753 2322 22 999999
Q ss_pred HHHcCCHHHHHHHHhcCCCccccc--ccCCCChHHHHHH-HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHH
Q 005095 205 AAGARRTLFVQELVNLMTPEDLAL--RNKVGNTALCFAA-VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKE 281 (715)
Q Consensus 205 Aa~~g~~~iv~~Ll~~~~g~~i~~--~d~~G~TpLh~Aa-~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~ 281 (715)
||..|+.++|++|++ +|++++. +|..|.||||+|+ ..|+.++|++|+++|+ .|.||||+|+..|+.+
T Consensus 170 Aa~~G~~eiv~~Ll~--~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 170 AAENGHLHVLNRLCE--LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHTTCHHHHHHHHH--SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTT
T ss_pred HHHCCCHHHHHHHHH--cCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHH
Confidence 999999999999999 8999888 8999999999999 9999999999999774 2889999999999999
Q ss_pred HHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhh
Q 005095 282 MIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCI 361 (715)
Q Consensus 282 iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll 361 (715)
++++|+++|++++..+ ++++.|+.+|+.++++..-... +...+......+.. ..
T Consensus 240 vv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~----------~~~~~~~li~~~~~----~~-------- 293 (376)
T 2aja_A 240 VNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQ----------GFYMLRNLIRRNDE----VL-------- 293 (376)
T ss_dssp HHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHH----------HHHHHHHHHHHCCG----GG--------
T ss_pred HHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhh----------hHHHHHHHHHcchh----hH--------
Confidence 9999999999876554 4788899999888653211000 00011111111110 01
Q ss_pred hcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCC
Q 005095 362 YSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSR 441 (715)
Q Consensus 362 ~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~ 441 (715)
.+.+++|++..........+.....+.||||+|++.|+.+++++|++.+ ..+|..|+
T Consensus 294 -------------------~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~----~v~~~~~~ 350 (376)
T 2aja_A 294 -------------------LDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP----SVLALTKA 350 (376)
T ss_dssp -------------------HHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH----HHHHSCC-
T ss_pred -------------------HHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh----HHHHHHHH
Confidence 2344444432110000111112235679999999999999999999753 56788999
Q ss_pred cHHHHHHHhCCHHHHHHHHHc
Q 005095 442 SMFHIAVVHRQEKIFNLIYEL 462 (715)
Q Consensus 442 T~Lh~A~~~~~~~iv~~Ll~~ 462 (715)
|++.+|-..|+.++.+.-+++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~ 371 (376)
T 2aja_A 351 NNYYINETGGRLDLRAVALEH 371 (376)
T ss_dssp ---------------------
T ss_pred hccccccccccccHHHHHHHH
Confidence 999999999999998876543
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.7e-31 Score=264.55 Aligned_cols=194 Identities=19% Similarity=0.098 Sum_probs=169.7
Q ss_pred ccCCCCCCcccccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Q 005095 146 LSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPED 225 (715)
Q Consensus 146 l~~~G~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~ 225 (715)
+.+.|..++..+..+.+|.||||.||..|+.+++++|++.+. +++. .|..|+||||+|+..|+.++|++|++ .|++
T Consensus 4 ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~--~ga~ 79 (229)
T 2vge_A 4 VLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN-DPSQ-PNEEGITALHNAICGANYSIVDFLIT--AGAN 79 (229)
T ss_dssp ------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS-CTTC-CCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC
T ss_pred hhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCC-CCCC-CCCCCCCHHHHHHHcCCHHHHHHHHH--CCCC
Confidence 556788788888889999999999999999999999998765 4444 48999999999999999999999999 8999
Q ss_pred cccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH--HHcCCHHHHHHHHhcCCCCCccccccccH
Q 005095 226 LALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA--ALLGHKEMIWYLYSVTKEEDLKEEDRIEL 303 (715)
Q Consensus 226 i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A--~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 303 (715)
++.+|..|+||||+|+..|+.+++++|+++|++++...+..|.||||+| +..|+.+++++|+++|++++.++..|.||
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 159 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA 159 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEE
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHH
Confidence 9999999999999999999999999999999999744457999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCChhHHHHHHhhCccc-ceecCCCCCCHHHHHHhCCC
Q 005095 304 LVAVIDAGLYDVALDLIQHHPQL-AMARDGNGETALHVLARKPS 346 (715)
Q Consensus 304 L~~A~~~g~~~iv~~Ll~~~~~~-~~~~d~~g~tpLh~A~~~~~ 346 (715)
++.++..+.. +.|++.+++. .+.+|.+|+||||+|+..|+
T Consensus 160 l~~~~~~~~~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 160 LWDYSAEFGD---ELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp SSCBCCSSTT---BCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred HHHHhhcccc---ccCccccccccccccCCCcccHHHHHHHcCC
Confidence 9976555433 5778888874 47889999999999999986
No 62
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=260.86 Aligned_cols=190 Identities=17% Similarity=0.245 Sum_probs=165.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcc--cccccCCCChHHHHHHHcCcHHHHHHHHhcCC-CCCccCCCCCCCHHHH
Q 005095 197 NQDTALHIAAGARRTLFVQELVNLMTPED--LALRNKVGNTALCFAAVSGVTKIAEVMVNKNR-ELPSIRGNKGATPLCM 273 (715)
Q Consensus 197 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~--i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~-~~~~~~d~~g~tpLh~ 273 (715)
.+.+++|.|+..|+.+.++.+++ .+.+ +|.+|.+|+||||+|+..|+.+++++|+++|+ ++ +.+|..|.||||+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~--~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSA--RLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIML 151 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCH--HHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHH
T ss_pred HhccCCCHHHHHHHHHHHHHHHH--HHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHH
Confidence 34678999999999999999988 4444 89999999999999999999999999999998 55 4899999999999
Q ss_pred HH-----HcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCc
Q 005095 274 AA-----LLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAF 348 (715)
Q Consensus 274 A~-----~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~ 348 (715)
|+ ..++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|++.|+++ +.+|.+|
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G-------------- 216 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDG-------------- 216 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS--------------
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCC--------------
Confidence 99 678899999999999999888999999999999999999999999988774 5555444
Q ss_pred ccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHH-
Q 005095 349 ASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQ- 427 (715)
Q Consensus 349 ~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~- 427 (715)
.||||+|+..|+.+++++|++
T Consensus 217 ----------------------------------------------------------~TpLh~A~~~g~~~iv~~Ll~~ 238 (276)
T 4hbd_A 217 ----------------------------------------------------------STALMCACEHGHKEIAGLLLAV 238 (276)
T ss_dssp ----------------------------------------------------------CCHHHHHHHHTCHHHHHHHHTS
T ss_pred ----------------------------------------------------------CCHHHHHHHCCCHHHHHHHHhc
Confidence 555555666678899999999
Q ss_pred hCCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q 005095 428 MYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELG 463 (715)
Q Consensus 428 ~~~d~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 463 (715)
.|++ ++.+|..|+||||+|+.+|+.+++++|++++
T Consensus 239 ~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 239 PSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 7888 7889999999999999999999999999875
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.4e-29 Score=237.86 Aligned_cols=161 Identities=25% Similarity=0.197 Sum_probs=148.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHH
Q 005095 159 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC 238 (715)
Q Consensus 159 ~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh 238 (715)
.+..|.||||.|+..|+.+++++|++..+...... +..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~ 80 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQ--HGADVHAKDKGGLVPLH 80 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHh--cCCCCCccCCCCCCHHH
Confidence 35668899999999999999999998776655544 7889999999999999999999999 89999999999999999
Q ss_pred HHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHH
Q 005095 239 FAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALD 318 (715)
Q Consensus 239 ~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~ 318 (715)
+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|+. ++.+++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~ 158 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDL 158 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHH
T ss_pred HHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHH
Confidence 9999999999999999999986 789999999999999999999999999999999999999999999877 99999999
Q ss_pred HHhhCc
Q 005095 319 LIQHHP 324 (715)
Q Consensus 319 Ll~~~~ 324 (715)
|+++|+
T Consensus 159 L~~~gA 164 (165)
T 3twr_A 159 LRGDAA 164 (165)
T ss_dssp HHTC--
T ss_pred Hhhccc
Confidence 998875
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=5.9e-29 Score=238.60 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=155.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHH
Q 005095 162 TSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA 241 (715)
Q Consensus 162 ~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa 241 (715)
.+.++||.||..|+.+++++|++..+.+++.. |..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQG-DDHGFSPLHWACREGRSAVVEMLIM--RGARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCccccccc-CCCCCCHHHHHHHcCcHHHHHHHHH--cCCCCCCcCCCCCCHHHHHH
Confidence 46789999999999999999999877777665 8999999999999999999999999 89999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHh
Q 005095 242 VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQ 321 (715)
Q Consensus 242 ~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 321 (715)
..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..++.+++++|++
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986 799999999999999999999999999999999999999999999999999999999999
Q ss_pred hCcccceecCCC
Q 005095 322 HHPQLAMARDGN 333 (715)
Q Consensus 322 ~~~~~~~~~d~~ 333 (715)
.++++ +..+..
T Consensus 160 ~g~~~-~~~~~~ 170 (179)
T 3f6q_A 160 MGQNL-NRIPYK 170 (179)
T ss_dssp TTCCC-SCBCCC
T ss_pred hhcCc-ccCCcc
Confidence 99986 444433
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.1e-28 Score=232.31 Aligned_cols=157 Identities=18% Similarity=0.169 Sum_probs=146.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV 242 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~ 242 (715)
..||||.|+..|+.+++++|++.+. +++.. |..|+||||+|+. |+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~-~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNV-NVNAQ-NGFGRTALQVMKL-GNPEIARRLLL--RGANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCC-CTTCC-CTTSCCHHHHCCS-SCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCC-Ccccc-CccCccHHHHHHc-CcHHHHHHHHH--cCCCCCCCCCCCCCHHHHHHH
Confidence 4599999999999999999997654 44443 8899999999999 99999999999 899999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-CCccccccccHHHHHHHcCChhHHHHHHh
Q 005095 243 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKE-EDLKEEDRIELLVAVIDAGLYDVALDLIQ 321 (715)
Q Consensus 243 ~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 321 (715)
.|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999986 7899999999999999999999999999998 59999999999999999999999999999
Q ss_pred hCcc
Q 005095 322 HHPQ 325 (715)
Q Consensus 322 ~~~~ 325 (715)
+|++
T Consensus 159 ~GAd 162 (162)
T 1ihb_A 159 NGAG 162 (162)
T ss_dssp TC--
T ss_pred hCCC
Confidence 9874
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.1e-28 Score=232.51 Aligned_cols=159 Identities=25% Similarity=0.235 Sum_probs=147.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHH
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCF 239 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~ 239 (715)
...+.|+||.||..|+.+++++|++.+. +++.. |..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGA-DVNAE-DASGWTPLHLAAFNGHLEIVEVLLK--NGADVNAVDHAGMTPLRL 86 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCccCCCCCCHHHH
Confidence 4456799999999999999999998754 44443 8899999999999999999999999 899999999999999999
Q ss_pred HHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHH
Q 005095 240 AAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDL 319 (715)
Q Consensus 240 Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~L 319 (715)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 999999999999999999986 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HhhC
Q 005095 320 IQHH 323 (715)
Q Consensus 320 l~~~ 323 (715)
++.|
T Consensus 166 ~~~G 169 (169)
T 2y1l_E 166 QKLN 169 (169)
T ss_dssp HTC-
T ss_pred HHcC
Confidence 9864
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.3e-28 Score=234.46 Aligned_cols=168 Identities=15% Similarity=0.127 Sum_probs=97.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcc-cccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Q 005095 199 DTALHIAAGARRTLFVQELVNLMTPED-LALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL 277 (715)
Q Consensus 199 ~TpLh~Aa~~g~~~iv~~Ll~~~~g~~-i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~ 277 (715)
.||||.|+..|+.++++.|++ .+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLR--KGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-ILAKERESALSLASTG 79 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHT--TCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHT
T ss_pred hhhHHHHHHcCCHHHHHHHHH--cCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-hhcccCCCHHHHHHHC
Confidence 455666666666666666655 3333 55555555555555555555555555555555553 4555555555555555
Q ss_pred CCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhH
Q 005095 278 GHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFW 357 (715)
Q Consensus 278 g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~ 357 (715)
|+.+++++|+++|++++.+ |..
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~----------------------------------~~~------------------------ 101 (172)
T 3v30_A 80 GYTDIVGLLLERDVDINIY----------------------------------DWN------------------------ 101 (172)
T ss_dssp TCHHHHHHHHTTTCCTTCC----------------------------------CTT------------------------
T ss_pred CCHHHHHHHHHcCCCCCCC----------------------------------CCC------------------------
Confidence 5555555555555443332 222
Q ss_pred hhhhhcCCcchhccCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccC
Q 005095 358 RRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVD 437 (715)
Q Consensus 358 ~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d 437 (715)
|.||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 102 ------------------------------------------------g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~ 132 (172)
T 3v30_A 102 ------------------------------------------------GGTPLLYAVRGNHVKCVEALLARGAD-LTTEA 132 (172)
T ss_dssp ------------------------------------------------SCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred ------------------------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCC-ccccC
Confidence 33444445555666777777777777 66777
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCcchhhhhcccCCCCchH
Q 005095 438 DHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNM 480 (715)
Q Consensus 438 ~~G~T~Lh~A~~~~~~~iv~~Ll~~ga~~~~l~~~~d~~G~Tp 480 (715)
..|+||||+|+..|+.+++++|+++|++.. .++..|.||
T Consensus 133 ~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~----~~~~~~~~p 171 (172)
T 3v30_A 133 DSGYTPMDLAVALGYRKVQQVIENHILKLF----QSNLVPADP 171 (172)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHHHHHS----CC-------
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHHHHHHHh----cccCCCCCC
Confidence 778888888888888888888888777765 366777666
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.2e-28 Score=228.14 Aligned_cols=151 Identities=23% Similarity=0.152 Sum_probs=143.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV 242 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~ 242 (715)
..||||.|+..|+.+++++|++.+.... .+..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLR--AGVSRDARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHT--TTCCTTCCCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCCCCCCCCHHHHHHH
Confidence 3589999999999999999999876432 37899999999999999999999999 899999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHH
Q 005095 243 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDL 319 (715)
Q Consensus 243 ~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~L 319 (715)
.|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus 77 ~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999986 7899999999999999999999999999999999999999999999999999999887
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=9e-31 Score=261.78 Aligned_cols=199 Identities=12% Similarity=0.082 Sum_probs=124.1
Q ss_pred HHHHhcCCCcccccc---cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q 005095 215 QELVNLMTPEDLALR---NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTK 291 (715)
Q Consensus 215 ~~Ll~~~~g~~i~~~---d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga 291 (715)
+.|++ +|++++.. +..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+
T Consensus 2 ~~ll~--~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 78 (229)
T 2vge_A 2 RSVLR--KAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-QPNEEGITALHNAICGANYSIVDFLITAGA 78 (229)
T ss_dssp ----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred eehhc--cCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 44555 45554433 2344556666666666666666666666654 566666666666666666666666666666
Q ss_pred CCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecC-CCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhc
Q 005095 292 EEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARD-GNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAI 370 (715)
Q Consensus 292 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 370 (715)
+++.+|..|.||||+|+..|+.+++++|++.|+++ +.++ .+|+||||+|+.
T Consensus 79 ~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a--------------------------- 130 (229)
T 2vge_A 79 NVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDP--------------------------- 130 (229)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCT---------------------------
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHH---------------------------
Confidence 66666666666666666666666666666666654 3332 455555555410
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHHHHHh
Q 005095 371 LDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVH 450 (715)
Q Consensus 371 ~~~~~lh~a~~~~~~~l~~~~l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~T~Lh~A~~~ 450 (715)
+..|+.+++++|+++|++ ++.+|..|.||+|.++..
T Consensus 131 -------------------------------------------~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 131 -------------------------------------------YREGYADCATYLADVEQS-MGLMNSGAVYALWDYSAE 166 (229)
T ss_dssp -------------------------------------------TSTTHHHHHHHHHHHHHH-TTTSGGGEEEESSCBCCS
T ss_pred -------------------------------------------HhcChHHHHHHHHHcCCC-cccccCCchHHHHHHhhc
Confidence 334566777777777777 666777777777755444
Q ss_pred CCHHHHHHHHHcCcchhhhhcccCCCCchHHHHhhhhCCCCcc
Q 005095 451 RQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRL 493 (715)
Q Consensus 451 ~~~~iv~~Ll~~ga~~~~l~~~~d~~G~TpLh~A~~~~~~~~l 493 (715)
+. .++|++.|+++++ +.+|.+|+||||+|++.|+.+.+
T Consensus 167 ~~---~~~ll~~ga~~~~--~~~d~~G~TpL~~A~~~g~~~~v 204 (229)
T 2vge_A 167 FG---DELSFREGESVTV--LRRDGPEETDWWWAALHGQEGYV 204 (229)
T ss_dssp ST---TBCCBCTTCEEEE--EESSCTTCSSEEEEEETTEEEEE
T ss_pred cc---cccCccccccccc--cccCCCcccHHHHHHHcCCccee
Confidence 32 3577888888654 46899999999999999987643
No 70
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.7e-28 Score=236.81 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=144.3
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHH
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCM 273 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~ 273 (715)
+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 107 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVE--NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-TKDFSGKTPLMW 107 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHH--HHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH--hccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHH
Confidence 48999999999999999999999999 799999999999999999999999999999999999986 789999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 274 AALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 274 A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..++
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGR 179 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999996 8899999999999999986
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2.7e-28 Score=228.23 Aligned_cols=154 Identities=20% Similarity=0.239 Sum_probs=145.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV 242 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~ 242 (715)
|.||||.|+..|+.+++++|++..+.+++.. |..|.||||+ +..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDAL-NRFGKTALQV-MMFGSTAIALELLK--QGASPNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHH--CCCCCCCcCCCCCCHHHHHHH
Confidence 5689999999999999999998844455554 8899999999 99999999999999 899999999999999999999
Q ss_pred cCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhh
Q 005095 243 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQH 322 (715)
Q Consensus 243 ~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 322 (715)
.|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++ ++++.++.+|.||||+|+..|+.+++++|+++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999986 7899999999999999999999999999 99999999999999999999999999999975
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.9e-28 Score=230.76 Aligned_cols=145 Identities=18% Similarity=0.188 Sum_probs=128.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHH
Q 005095 196 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAA 275 (715)
Q Consensus 196 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~ 275 (715)
....||||.|+..|+.+++++|++ .|++++.+|..|+||||+|+. |+.+++++|+++|++++ .+|..|.||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQ--NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTT--SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHh--CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH
Confidence 356799999999999999999999 899999999999999999999 99999999999999986 78999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhC
Q 005095 276 LLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARK 344 (715)
Q Consensus 276 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 344 (715)
..|+.+++++|+++|++++.++.+|.||||+|+..|+.+++++|++++++..+.+|..|+||||+|+..
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHc
Confidence 999999999999999999999999999999999999999999999998875455555555555554443
No 73
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=8.8e-28 Score=227.52 Aligned_cols=146 Identities=12% Similarity=0.180 Sum_probs=141.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Q 005095 197 NQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAAL 276 (715)
Q Consensus 197 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~ 276 (715)
.|.||||.|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIE--QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-LLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHH--HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHH--cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHH
Confidence 58899999999999999999999 799999999999999999999999999999999999986 789999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 277 LGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 277 ~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999986 8899999999999999886
No 74
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=3.1e-27 Score=224.37 Aligned_cols=148 Identities=24% Similarity=0.292 Sum_probs=141.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
...+.||||.||+.|+.++|++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMA--NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN-AVDHAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHH
Confidence 4567899999999999999999999 899999999999999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..++
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISIDNGN 158 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999996 8899999999999999886
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.3e-28 Score=247.87 Aligned_cols=216 Identities=14% Similarity=0.153 Sum_probs=108.3
Q ss_pred CCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcC
Q 005095 232 VGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAG 311 (715)
Q Consensus 232 ~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g 311 (715)
.|.||||.|++.|+.++++.|+++|++++ .+..|.||||.|+..|+.++|++|+++|++++.+|..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 34555555555555555555555555443 1234455555555555555555555555555555555555555555555
Q ss_pred ChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCCCcccCcchhhHhhhhhcCCcchhccCCchhHHHHHHHHHHHHHHH
Q 005095 312 LYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQV 391 (715)
Q Consensus 312 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~lh~a~~~~~~~l~~~~ 391 (715)
+.+++++|+++++++ +.+|.+|+
T Consensus 82 ~~~~v~~Ll~~ga~~-~~~d~~g~-------------------------------------------------------- 104 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNV-NAADSDGW-------------------------------------------------------- 104 (239)
T ss_dssp CHHHHHHHHHHTCCT-TCCCTTCC--------------------------------------------------------
T ss_pred CHHHHHHHHHcCCCC-CccCCCCC--------------------------------------------------------
Confidence 555555555554443 33333333
Q ss_pred HhcCcccccccccCCchHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCC-cHHHHH--HHhCCHHHHHHHHHcCcchhh
Q 005095 392 LLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSR-SMFHIA--VVHRQEKIFNLIYELGAHKDL 468 (715)
Q Consensus 392 l~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~d~~~~~d~~G~-T~Lh~A--~~~~~~~iv~~Ll~~ga~~~~ 468 (715)
||||+|+..|+.+++++|+++|++ ++.+|..|. ||||+| +..|+.+++++|+++|++++.
T Consensus 105 ----------------tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 105 ----------------TPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp ----------------CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred ----------------CHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 344444445566777777777777 556665555 888887 677788888888888877764
Q ss_pred hh-----cccCCCCchHHHHhhhhCCCCccccCCCchhhhHHHhhhHHHHHHhhcchhHhhhhcCCCCchhhhHH
Q 005095 469 IA-----SYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFKEIEKVVQPSYREAKNSEGRTPHILFSE 538 (715)
Q Consensus 469 l~-----~~~d~~G~TpLh~A~~~~~~~~l~l~~ga~~~~~~~l~~~~~v~~ll~~~~~~~~n~~G~Tpl~~a~~ 538 (715)
.. ...|..|.||++++.+.|..-.++...+... ..|.+ ....++.|.+|..+...
T Consensus 168 ~~~~~~~al~d~~~~~~~eLa~~~G~~i~vl~~~~~~~-----~~Ww~----------~~~~~~~G~~P~~yv~~ 227 (239)
T 1ycs_B 168 MNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDE-----IEWWW----------ARLNDKEGYVPRNLLGL 227 (239)
T ss_dssp TGGGEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSC-----SSEEE----------EEETTEEEEEEGGGEEC
T ss_pred cccceEEEEeccCCCCCCcccccCCCEEEEEEecCCCC-----CCEEE----------EEECCcEEEeehHHeeE
Confidence 21 1238889999999999887544444333220 01210 13467789999887643
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.2e-28 Score=246.31 Aligned_cols=179 Identities=15% Similarity=0.061 Sum_probs=135.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHH
Q 005095 161 FTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFA 240 (715)
Q Consensus 161 ~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~A 240 (715)
..|.||||.|+..|+.+.++.|++.+.+. +. +..|.||||.|+..|+.++|++|++ .|++++.+|..|+||||+|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~--~~~~~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRV-KF--NPLPLALLLDSSLEGEFDLVQRIIY--EVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTS--TTSSCCCCCTTSCCHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCc-cc--CchhhHHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHH
Confidence 46899999999999999999999876543 32 5789999999999999999999999 8999999999999999999
Q ss_pred HHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccc-cHHHHH--HHcCChhHHH
Q 005095 241 AVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRI-ELLVAV--IDAGLYDVAL 317 (715)
Q Consensus 241 a~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~-t~L~~A--~~~g~~~iv~ 317 (715)
+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|. ||||.| +..|+.++++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 99999999999999999986 7999999999999999999999999999999999998877 999999 8889999999
Q ss_pred HHHhhCcccceec---------CCCCCCHHHHHHhCCC
Q 005095 318 DLIQHHPQLAMAR---------DGNGETALHVLARKPS 346 (715)
Q Consensus 318 ~Ll~~~~~~~~~~---------d~~g~tpLh~A~~~~~ 346 (715)
+|++++++. +.. +..+.+|++++...|.
T Consensus 157 ~Ll~~~a~~-~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 157 FLYGVQEKM-GIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHHT-TTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHhhhcc-cccccceEEEEeccCCCCCCcccccCCC
Confidence 999998774 332 6678899998888775
No 77
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.9e-27 Score=225.89 Aligned_cols=146 Identities=18% Similarity=0.211 Sum_probs=132.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
+.++.+|||.|+..|+.++|++|++. .+.+++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 79 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDN-TENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN-VMNRGDDTPLHLA 79 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHC-TTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhc-CcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCCHHHHH
Confidence 35688999999999999999999995 478899999999999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHh
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLAR 343 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 343 (715)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEMPVDKAKA 147 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCCGGGGSCH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999885 7778888887777664
No 78
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=5.9e-27 Score=218.47 Aligned_cols=144 Identities=21% Similarity=0.178 Sum_probs=137.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Q 005095 198 QDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL 277 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~ 277 (715)
..||||.|++.|+.+++++|++ .|++++ .|..|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~--~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMA--NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-ARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH--HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHH--cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHc
Confidence 4589999999999999999999 788876 58899999999999999999999999999986 7899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 278 GHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 278 g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+
T Consensus 78 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999996 8899999999999999986
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.2e-26 Score=216.93 Aligned_cols=144 Identities=20% Similarity=0.202 Sum_probs=137.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Q 005095 198 QDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL 277 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~ 277 (715)
+.||||.|+..|+.+++++|++. .+.+++.+|..|.||||+ +..|+.+++++|+++|++++ .+|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-VQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHc
Confidence 56899999999999999999995 466999999999999999 99999999999999999986 7999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 278 GHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 278 g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. ++. +.+|.+|.||||+|+..|+
T Consensus 79 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 79 GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCC
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999999999999999999999999 664 8899999999999999986
No 80
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=6.4e-27 Score=221.08 Aligned_cols=146 Identities=21% Similarity=0.238 Sum_probs=138.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
|.+|.||||.|++.|+.++++.|++. .+.+++..+..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH-AKDKGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHc-CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-ccCCCCCCHHHHH
Confidence 67789999999999999999999986 577888899999999999999999999999999999986 7899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHh
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLAR 343 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 343 (715)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++. +.+|.+|+||||+|+.
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc
Confidence 9999999999999999999999999999999999999999999999999986 8999999999999876
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=7.1e-27 Score=225.23 Aligned_cols=157 Identities=14% Similarity=0.047 Sum_probs=141.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCH----HHHHHHHhcCCCcccccccCCCChHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRT----LFVQELVNLMTPEDLALRNKVGNTALC 238 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~----~iv~~Ll~~~~g~~i~~~d~~G~TpLh 238 (715)
++++||.||+.|+.+.++.+++.+... ..+..|+||||+|+..|+. +++++|++ +|+++|.+|.+|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~--~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED---KESVLKSNILYDVLRNNNDEARYKISMFLIN--KGADIKSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH--TTCCSSCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHH--CCCCCCCCCCCCCcHHH
Confidence 568999999999999999999775432 2136799999999999985 59999999 89999999999999999
Q ss_pred HHHHcCc------HHHHHHHHhcCCCCCccCCCCCC-CHHHHHHHcC-----CHHHHHHHHh-cCCCCCccccccccHHH
Q 005095 239 FAAVSGV------TKIAEVMVNKNRELPSIRGNKGA-TPLCMAALLG-----HKEMIWYLYS-VTKEEDLKEEDRIELLV 305 (715)
Q Consensus 239 ~Aa~~g~------~~iv~~Ll~~g~~~~~~~d~~g~-tpLh~A~~~g-----~~~iv~~Ll~-~ga~~~~~~~~g~t~L~ 305 (715)
+|+..|+ .+++++|+++|++++ .+|..|. ||||+|+..+ +.+++++|++ +|++++.+|..|.||||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 9999987 689999999999997 8999999 9999999944 4679999999 99999999999999999
Q ss_pred HHHHcCChhHHHHHHhhCcc
Q 005095 306 AVIDAGLYDVALDLIQHHPQ 325 (715)
Q Consensus 306 ~A~~~g~~~iv~~Ll~~~~~ 325 (715)
+|++.|+.+++++|.+....
T Consensus 160 ~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 160 FVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999987544
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.6e-26 Score=206.88 Aligned_cols=126 Identities=18% Similarity=0.145 Sum_probs=65.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCC-CCCHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNK-GATPLCM 273 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~-g~tpLh~ 273 (715)
|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. |+.+++++|+++|++++ .+|.. |.||||+
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~ 84 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLE--AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-CADPATLTRPVHD 84 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS-CCBTTTTBCHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHH--cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC-CcCCCCCCCHHHH
Confidence 4445555555555555555555555 455555555555555555555 55555555555555543 34444 5555555
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCc
Q 005095 274 AALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHP 324 (715)
Q Consensus 274 A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~ 324 (715)
|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 555555555555555555555555555555555555555555555555443
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=6.7e-26 Score=212.11 Aligned_cols=141 Identities=17% Similarity=0.156 Sum_probs=66.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCh-HH
Q 005095 159 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNT-AL 237 (715)
Q Consensus 159 ~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~T-pL 237 (715)
.+..|.||||+|+..|+.+++++|++.+. +++.. |..|+||||+|+ .|+.+++++|++ .|++++.+|..|.| ||
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~--~g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGA-NPNAP-NSYGRRPIQVMM-MGSARVAELLLL--HGAEPNCADPATLTRPV 82 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTC-CTTCC-CSSSCCTTTSSC-TTCHHHHHHHHT--TTCCCCCCCTTTCCCHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCC-CCCCC-CCCCCCHHHHHH-cCCHHHHHHHHH--cCCCCCCcCCCCCcHHH
Confidence 34445555555555555555555554422 22222 455555555553 555555555555 45555555555555 55
Q ss_pred HHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHH
Q 005095 238 CFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLV 305 (715)
Q Consensus 238 h~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~ 305 (715)
|+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.||.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 55555555555555555555553 45555555555555555555555555555555555555555443
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=8.1e-26 Score=211.54 Aligned_cols=144 Identities=17% Similarity=0.080 Sum_probs=120.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCC-HHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGAT-PLCM 273 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~t-pLh~ 273 (715)
+..|.||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+ .|+.+++++|+++|++++ .+|..|.| |||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~-~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLE--AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN-CADPATLTRPVHD 84 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHT--TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC-CCCTTTCCCHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHH--cCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHH
Confidence 6789999999999999999999999 89999999999999999985 899999999999999986 79999999 9999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHh
Q 005095 274 AALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLAR 343 (715)
Q Consensus 274 A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 343 (715)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++. +.++..|.||.+.+..
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~~~~~~~ 153 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNHARIDAAEGPSD 153 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCcCcCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999996 8899999999886543
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=1.9e-25 Score=203.81 Aligned_cols=132 Identities=17% Similarity=0.167 Sum_probs=123.4
Q ss_pred ccccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCC-C
Q 005095 155 GVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKV-G 233 (715)
Q Consensus 155 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~-G 233 (715)
+++..+..|.||||+|+..|+.+++++|++.+. +++.+ |..|+||||+|+. |+.+++++|++ +|++++.+|.. |
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~--~g~~~~~~~~~~g 78 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGA-DPNAL-NRFGRRPIQVMMM-GSAQVAELLLL--HGAEPNCADPATL 78 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC-CTTCC-CTTCCTTTTTSTT-SCHHHHHHHHH--HTCCSSCCBTTTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC-CcCCc-CCCCCCHHHHHHc-CCHHHHHHHHH--CCCCCCCcCCCCC
Confidence 567888999999999999999999999998754 45544 8999999999999 99999999999 89999999999 9
Q ss_pred ChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 005095 234 NTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKE 292 (715)
Q Consensus 234 ~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~ 292 (715)
+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999986 8999999999999999999999999999985
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=4e-24 Score=191.53 Aligned_cols=124 Identities=27% Similarity=0.429 Sum_probs=60.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHH
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV 242 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~ 242 (715)
|+||||.|+..|+.+++++|++.+.. ++. .|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNA-KDKNGRTPLHLAARNGHLEVVKLLLE--AGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC-TTC-CCTTSCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCC-CCC-cCCCCCcHHHHHHHcCcHHHHHHHHH--cCCCCcccCCCCCcHHHHHHH
Confidence 44555555555555555555544322 222 24445555555555555555555555 445555555555555555555
Q ss_pred cCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q 005095 243 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTK 291 (715)
Q Consensus 243 ~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga 291 (715)
.|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 555555555555554443 444445555555555555555555555444
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.8e-24 Score=197.36 Aligned_cols=126 Identities=24% Similarity=0.256 Sum_probs=87.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
...+.||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMA--NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHH
Confidence 3456677777777777777777777 667777777777777777777777777777777777664 5666777777777
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhC
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHH 323 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~ 323 (715)
+..|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|++.|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7777777777777777777777777777777777777777777776653
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.9e-24 Score=208.25 Aligned_cols=143 Identities=15% Similarity=0.074 Sum_probs=129.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCChHHHHHHHcCcH----HHHHHHHhcCCCCCccCCCCCCCHHH
Q 005095 198 QDTALHIAAGARRTLFVQELVNLMTPEDLALRN-KVGNTALCFAAVSGVT----KIAEVMVNKNRELPSIRGNKGATPLC 272 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d-~~G~TpLh~Aa~~g~~----~iv~~Ll~~g~~~~~~~d~~g~tpLh 272 (715)
+.++||.|++.|+.+.++.+++ .+ ++.++ ..|+||||+|+.+|+. +++++|+++|++++ .+|..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~--~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn-~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFE--KG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK-SRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHH--HS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS-CCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHh--cC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC-CCCCCCCcHHH
Confidence 4689999999999999999988 34 45556 7899999999999975 59999999999997 89999999999
Q ss_pred HHHHcCC------HHHHHHHHhcCCCCCccccccc-cHHHHHHHcCC-----hhHHHHHHh-hCcccceecCCCCCCHHH
Q 005095 273 MAALLGH------KEMIWYLYSVTKEEDLKEEDRI-ELLVAVIDAGL-----YDVALDLIQ-HHPQLAMARDGNGETALH 339 (715)
Q Consensus 273 ~A~~~g~------~~iv~~Ll~~ga~~~~~~~~g~-t~L~~A~~~g~-----~~iv~~Ll~-~~~~~~~~~d~~g~tpLh 339 (715)
+|+..|+ .+++++|+++|+++|.+|..|. ||||+|+..+. .+++++|++ +|+++ +.+|..|+||||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G~TpL~ 159 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTALE 159 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTSCCHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCCCCHHH
Confidence 9999987 6899999999999999999999 99999999543 569999999 99996 899999999999
Q ss_pred HHHhCCC
Q 005095 340 VLARKPS 346 (715)
Q Consensus 340 ~A~~~~~ 346 (715)
+|++.++
T Consensus 160 ~A~~~~~ 166 (186)
T 3t8k_A 160 FVKRCQK 166 (186)
T ss_dssp HHHTTTC
T ss_pred HHHHcCC
Confidence 9999886
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=188.07 Aligned_cols=126 Identities=25% Similarity=0.347 Sum_probs=122.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Q 005095 197 NQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAAL 276 (715)
Q Consensus 197 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~ 276 (715)
+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~--~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLE--AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHH--HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHH--cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCcHHHHHHH
Confidence 58999999999999999999999 799999999999999999999999999999999999986 789999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcc
Q 005095 277 LGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQ 325 (715)
Q Consensus 277 ~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~ 325 (715)
.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999874
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1e-23 Score=192.35 Aligned_cols=127 Identities=21% Similarity=0.199 Sum_probs=116.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHH
Q 005095 159 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC 238 (715)
Q Consensus 159 ~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh 238 (715)
....|.||||+||..|+.+++++|++.+. +++.. |..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGA-DVNAK-DEYGLTPLYLATAHGHLEIVEVLLK--NGADVNAVDAIGFTPLH 85 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTCCCHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCC-CCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCcCCCCCCCHHH
Confidence 34567899999999999999999998754 44444 8899999999999999999999999 89999999999999999
Q ss_pred HHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 005095 239 FAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVT 290 (715)
Q Consensus 239 ~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~g 290 (715)
+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999986 78999999999999999999999999876
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=5.3e-24 Score=194.38 Aligned_cols=126 Identities=21% Similarity=0.207 Sum_probs=90.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
|.+|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A 83 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQ--NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-TTGYQNDSPLHDA 83 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHH--TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCGGGCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-CcCCCCCCHHHHH
Confidence 6677777777777777777777777 677777777777777777777777777777777777765 5677777777777
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhC
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHH 323 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~ 323 (715)
+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 7777777777777777777777777777777777766666666555543
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1e-24 Score=209.93 Aligned_cols=112 Identities=18% Similarity=0.168 Sum_probs=78.4
Q ss_pred cCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccc-cccccHHHHHH
Q 005095 230 NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKE-EDRIELLVAVI 308 (715)
Q Consensus 230 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~L~~A~ 308 (715)
+..|+||||+|+..|+.++++.|++ |++++ .+|..|.||||+|+..|+.+++++|+++|++++.++ .+|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4466677777777777777777776 66654 566677777777777777777777777777776666 66777777777
Q ss_pred HcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhC
Q 005095 309 DAGLYDVALDLIQHHPQLAMARDGNGETALHVLARK 344 (715)
Q Consensus 309 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 344 (715)
..|+.+++++|+++|+++ +.+|.+|+||||+|++.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 119 GYVRPEVVEALVELGADI-EVEDERGLTALELAREI 153 (183)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHh
Confidence 777777777777777664 66777777777777764
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=7.6e-25 Score=221.08 Aligned_cols=110 Identities=18% Similarity=0.184 Sum_probs=66.4
Q ss_pred CCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccc-cccccHHHHHHH
Q 005095 231 KVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKE-EDRIELLVAVID 309 (715)
Q Consensus 231 ~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~L~~A~~ 309 (715)
..|.||||+|+..|+.++++.|++ |++++ .+|..|.||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 345566666666666666666665 55553 455556666666666666666666666666665555 455666666666
Q ss_pred cCChhHHHHHHhhCcccceecCCCCCCHHHHHHh
Q 005095 310 AGLYDVALDLIQHHPQLAMARDGNGETALHVLAR 343 (715)
Q Consensus 310 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 343 (715)
.|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 121 ~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 121 YVRPEVVEALVELGADI-EVEDERGLTALELARE 153 (244)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHH
Confidence 66666666666665553 5666777777777765
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=6.6e-23 Score=197.16 Aligned_cols=140 Identities=24% Similarity=0.184 Sum_probs=126.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCChHHH
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRN-KVGNTALC 238 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d-~~G~TpLh 238 (715)
+..|+||||+|+..|+.++++.|++ +.+++.. |..|+||||+|+..|+.+++++|++ .|++++.+| ..|+||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAV-DENGRTALLFVAGLGSDKCVRLLAE--AGADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCcCCCCCCCCHHH
Confidence 4568899999999999999999998 4455554 8999999999999999999999999 899999998 89999999
Q ss_pred HHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHH
Q 005095 239 FAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALD 318 (715)
Q Consensus 239 ~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~ 318 (715)
+|+..|+.+++++|+++|++++ .+|..|.||||+|++.++. ..+.+||++|+..|+.++++.
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~ 177 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINV 177 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHH
Confidence 9999999999999999999986 8999999999999986543 346799999999999999999
Q ss_pred HHhh
Q 005095 319 LIQH 322 (715)
Q Consensus 319 Ll~~ 322 (715)
|.++
T Consensus 178 L~~~ 181 (183)
T 3deo_A 178 LEGQ 181 (183)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 9765
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=8.5e-23 Score=212.40 Aligned_cols=139 Identities=17% Similarity=0.084 Sum_probs=125.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccc------ccCCCChHHHHHHHc---CcHHHHHHHHhcCCCCCccCCCCCC
Q 005095 198 QDTALHIAAGARRTLFVQELVNLMTPEDLAL------RNKVGNTALCFAAVS---GVTKIAEVMVNKNRELPSIRGNKGA 268 (715)
Q Consensus 198 g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~------~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~~d~~g~ 268 (715)
+.++||.|+..|+.+.|+.|++ .|++++. .|..|+||||+|+.. |+.+++++|+++|++++ .+|..|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~--~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFA--NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHH--TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT-CCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHh--cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC-CCCCCCC
Confidence 3467999999999999999999 8999998 689999999999997 89999999999999986 7899999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCCC
Q 005095 269 TPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS 346 (715)
Q Consensus 269 tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 346 (715)
||||+|+..|+.++|++|+++|++++.+|.+|.||||+|+..|+.+++++|++++++ .|.||||+|+..|+
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999998875 58999999999875
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=4.5e-23 Score=184.43 Aligned_cols=111 Identities=23% Similarity=0.214 Sum_probs=81.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
+..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVA--KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHH--TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHH--cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHH
Confidence 4556777777777777777777777 677777777777777777777777777777777777765 6777777777777
Q ss_pred HHcCCHHHHHHHHhcCCCCCccccccccHHHHHH
Q 005095 275 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVI 308 (715)
Q Consensus 275 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~ 308 (715)
+..|+.+++++|+++|++++.++.+|.||||+|.
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 7777777777777777777777777777777773
No 97
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=9.1e-23 Score=205.80 Aligned_cols=142 Identities=23% Similarity=0.171 Sum_probs=128.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCChHHHH
Q 005095 161 FTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRN-KVGNTALCF 239 (715)
Q Consensus 161 ~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d-~~G~TpLh~ 239 (715)
..|.||||+||..|+.++++.|++ +.+++.+ |..|+||||+||..|+.++|++|++ +|++++.+| ..|.||||+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRDVDAV-DENGRTALLFVAGLGSDKCVRLLAE--AGADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHH--TTCCTTCCCSSSCCCHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHCCCHHHHHHHHH--cCCCCCcCCCCCCCCHHHH
Confidence 468899999999999999999998 4455554 8999999999999999999999999 899999998 789999999
Q ss_pred HHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHH
Q 005095 240 AAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDL 319 (715)
Q Consensus 240 Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~L 319 (715)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..++ ...+.||||+|+..|+.+++++|
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 999999999999999999986 899999999999986332 24688999999999999999999
Q ss_pred HhhCcc
Q 005095 320 IQHHPQ 325 (715)
Q Consensus 320 l~~~~~ 325 (715)
++...+
T Consensus 180 ~~~~~~ 185 (244)
T 3ui2_A 180 EGQVFE 185 (244)
T ss_dssp HHHHEE
T ss_pred HHhccc
Confidence 997544
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=4.8e-23 Score=204.64 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=80.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhc-CCCCCccCCCCCCCHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNK-NRELPSIRGNKGATPLCM 273 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-g~~~~~~~d~~g~tpLh~ 273 (715)
+..|.||||+||..|+.++|++|++ .|++++.+|..|+||||+|+..|+.+++++|+++ |++++ .+|..|.||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~d~~g~tpL~~ 146 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLD--NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN-QQNKLGDTALHA 146 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC-CCCTTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHh--CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc-ccCCCCCCHHHH
Confidence 4556666666666666666666666 5666666666666666666666666666666666 66654 566666666666
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCccc
Q 005095 274 AALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQL 326 (715)
Q Consensus 274 A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~ 326 (715)
|+..|+.+++++|+++|++++.++.+|.||||+|+..++.++++.|++.++..
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 66666666666666666666666666666666666666666666666666543
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=209.07 Aligned_cols=141 Identities=18% Similarity=0.093 Sum_probs=122.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccchhhc-----cCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcccccccCCCC
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAVCVR-----ISRNQDTALHIAAGA---RRTLFVQELVNLMTPEDLALRNKVGN 234 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~-----~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~g~~i~~~d~~G~ 234 (715)
+.++||.|+..|+.+.++.|++.+.+ ++.. .+..|+||||+|+.. |+.++|++|++ .|++++.+|..|+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~--~gadvn~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ--NGGHLDAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHH--HSSCTTCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHh--cCCCCCCCCCCCC
Confidence 45789999999999999999977654 3331 378999999999997 89999999999 7999999999999
Q ss_pred hHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCCh
Q 005095 235 TALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY 313 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~ 313 (715)
||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999999986 8999999999999999999999999999986 589999999988863
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=4.7e-22 Score=181.38 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=112.0
Q ss_pred CcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccccc
Q 005095 223 PEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIE 302 (715)
Q Consensus 223 g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 302 (715)
|+|+ .+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5667 789999999999999999999999999999986 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHhCC
Q 005095 303 LLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKP 345 (715)
Q Consensus 303 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~~ 345 (715)
|||+|+..|+.+++++|+++++++ +.+|.+|.||||+|+..+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhcc
Confidence 999999999999999999999996 899999999999998754
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=9e-23 Score=202.64 Aligned_cols=140 Identities=22% Similarity=0.236 Sum_probs=114.4
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CcccccccCCCC
Q 005095 156 VERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMT-PEDLALRNKVGN 234 (715)
Q Consensus 156 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~-g~~i~~~d~~G~ 234 (715)
++..+..|.||||+||..|+.+++++|++.+. +++.+ |..|+||||+||..|+.++|++|++ . |++++.+|..|+
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRV-GVNGL-DKAGSTALYWACHGGHKDIVEMLFT--QPNIELNQQNKLGD 141 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTC-CTTCC-CTTSCCHHHHHHHTTCHHHHHHHTT--STTCCCCCCCTTSC
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCC-Ccccc-CCCCCCHHHHHHHcCCHHHHHHHHc--CCCCCccccCCCCC
Confidence 34456678899999999999999999998654 45544 8999999999999999999999999 6 999999999999
Q ss_pred hHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccc
Q 005095 235 TALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDR 300 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g 300 (715)
||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.++++.|++.|++.+..+.++
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999999999999986 899999999999999999999999999999877665543
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=5.8e-22 Score=177.17 Aligned_cols=118 Identities=18% Similarity=0.179 Sum_probs=104.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhCccchhhccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHH
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCF 239 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~ 239 (715)
+..|.||||+|+..|+.+++++|++.+. +++.. |..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGE-DVNRT-LEGGRKPLHYAADCGQLEILEFLLL--KGADINAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSC-CTTSSCHHHHHHHTTCHHHHHHHHT--TTCCTTCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCC-CcCcc-CCCCCcHHHHHHHcCCHHHHHHHHH--cCCCCCcCCCCCCCHHHH
Confidence 4567899999999999999999998765 44444 8899999999999999999999999 899999999999999999
Q ss_pred HHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHH
Q 005095 240 AAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEM 282 (715)
Q Consensus 240 Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~i 282 (715)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..+..++
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999999986 899999999999955444444
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.6e-20 Score=192.95 Aligned_cols=164 Identities=20% Similarity=0.110 Sum_probs=138.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhhCccchh--------------------h--ccCC-------CCCcHHHHHHHcC
Q 005095 159 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVC--------------------V--RISR-------NQDTALHIAAGAR 209 (715)
Q Consensus 159 ~~~~g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~~--------------------~--~~d~-------~g~TpLh~Aa~~g 209 (715)
.|..+.++|+.+...|+....+++-..-+.... . .... ...++||.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 466778899999999997776654321110000 0 0000 1235899999999
Q ss_pred CHHHHHHHHhcCCCcc------cccccCCCChHHHHHHHc---CcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH
Q 005095 210 RTLFVQELVNLMTPED------LALRNKVGNTALCFAAVS---GVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHK 280 (715)
Q Consensus 210 ~~~iv~~Ll~~~~g~~------i~~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~ 280 (715)
+.+.++.+++ .|.+ ++..|..|+||||+|+.. |+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 142 d~~~~~~ll~--~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-~~d~~g~TpLh~A~~~g~~ 218 (278)
T 1dcq_A 142 DIFGLLQAYA--DGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-KQTGKGSTALHYCCLTDNA 218 (278)
T ss_dssp CHHHHHHHHH--TTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-CCCTTCCCHHHHHHHTTCH
T ss_pred ccHHHHHHHH--hhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-ccCCCCCCHHHHHHHcCCH
Confidence 9999999999 7888 445588999999999999 89999999999999987 7999999999999999999
Q ss_pred HHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcc
Q 005095 281 EMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQ 325 (715)
Q Consensus 281 ~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~ 325 (715)
++|++|+++|++++.+|.+|.||||+|+..|+.+++++|++++++
T Consensus 219 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 219 ECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999875
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=7.2e-21 Score=160.93 Aligned_cols=93 Identities=28% Similarity=0.408 Sum_probs=78.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Q 005095 197 NQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAAL 276 (715)
Q Consensus 197 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~ 276 (715)
+|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLE--AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH--cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHH
Confidence 47888888888888888888888 788888888888888888888888888888888888875 788888888888888
Q ss_pred cCCHHHHHHHHhcCCC
Q 005095 277 LGHKEMIWYLYSVTKE 292 (715)
Q Consensus 277 ~g~~~iv~~Ll~~ga~ 292 (715)
.|+.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 8888888888888764
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.1e-20 Score=201.12 Aligned_cols=147 Identities=16% Similarity=0.182 Sum_probs=118.0
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHhcCCCccccccc--CCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHH
Q 005095 195 SRNQDTALHIAAGA-RRTLFVQELVNLMTPEDLALRN--KVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPL 271 (715)
Q Consensus 195 d~~g~TpLh~Aa~~-g~~~iv~~Ll~~~~g~~i~~~d--~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpL 271 (715)
+..+.||||.|+.. |+.++++.|++ .|++++..| ..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~--~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-~~d~~G~TpL 272 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALA--HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN-QADSAGRGPL 272 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHH--TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHH--cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHH
Confidence 34567899999999 99999999999 899999988 899999999999999999999999999986 7899999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccc--eecCCCCCCHHHHHHhC
Q 005095 272 CMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLA--MARDGNGETALHVLARK 344 (715)
Q Consensus 272 h~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~--~~~d~~g~tpLh~A~~~ 344 (715)
|+|+..|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|++.+.... ...+..+.|+++.+...
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764321 23456678888877654
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.5e-20 Score=208.06 Aligned_cols=135 Identities=19% Similarity=0.120 Sum_probs=102.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccc------cCCCChHHHHHHH---cCcHHHHHHHHhcCCCCCccCCCCCCC
Q 005095 199 DTALHIAAGARRTLFVQELVNLMTPEDLALR------NKVGNTALCFAAV---SGVTKIAEVMVNKNRELPSIRGNKGAT 269 (715)
Q Consensus 199 ~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~------d~~G~TpLh~Aa~---~g~~~iv~~Ll~~g~~~~~~~d~~g~t 269 (715)
.+.||.|+..|+.+.|+.|++ .|+++|.+ |..|.||||+|+. .|+.++|++|+++|++++ .+|.+|.|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~--~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-~~d~~g~T 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFA--NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNT 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH--TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT-CCCSSSCC
T ss_pred HHHHHHHHhccCHHHHHHHHh--hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC-ccCCCCCc
Confidence 367888888888888888888 78888776 7788888888865 788888888888888876 77888888
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcCChhHHHHHHhhCcccceecCCCCCCHHHHHHh
Q 005095 270 PLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLAR 343 (715)
Q Consensus 270 pLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 343 (715)
|||+|+..|+.++|++|+++|++++.+|.+|.||||+|+..|+.+++++|+++|++. +. +|+|.+..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-~~------~~~h~~~~ 276 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT-FA------FPLHVDYS 276 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-CC------Ccceeecc
Confidence 888888888888888888888888888888888888888888888888888888775 22 56776554
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=3.6e-20 Score=190.30 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=116.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhCccch----hhccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcccccccCCCCh
Q 005095 163 SYAPLHLAALKGDWDFARNFFNLNPEAV----CVRISRNQDTALHIAAGA---RRTLFVQELVNLMTPEDLALRNKVGNT 235 (715)
Q Consensus 163 g~T~Lh~Aa~~g~~~~v~~LL~~~~~~~----~~~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~g~~i~~~d~~G~T 235 (715)
..++|+.|+..|+.+.++.+++.+.+.. ....|..|+||||+|+.. |+.++|++|++ +|+++|.+|..|+|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~--~ga~in~~d~~g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ--NSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH--HCSCTTCCCTTCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH--CCCCccccCCCCCC
Confidence 3479999999999999999998766532 122378899999999999 99999999999 89999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 005095 236 ALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKE 292 (715)
Q Consensus 236 pLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~ 292 (715)
|||+|+..|+.++|++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999986 8999999999999999999999999999985
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=3.3e-20 Score=197.41 Aligned_cols=147 Identities=18% Similarity=0.179 Sum_probs=116.4
Q ss_pred cCCCCCChHHHHHHHc-CCHHHHHHHHhhCccchhhccC--CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCC
Q 005095 158 RNCFTSYAPLHLAALK-GDWDFARNFFNLNPEAVCVRIS--RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGN 234 (715)
Q Consensus 158 ~~~~~g~T~Lh~Aa~~-g~~~~v~~LL~~~~~~~~~~~d--~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~ 234 (715)
..+..+.|+||.|+.. |+.++++.||+.+.+ ++.. + ..|.||||+|+..|+.++|++|++ +|++++.+|..|+
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~--~Gadvn~~d~~G~ 269 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGAD-VNWV-NGGQDNATPLIQATAANSLLACEFLLQ--NGANVNQADSAGR 269 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSC
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCCC-CCcc-ccccCCCCHHHHHHHCCCHHHHHHHHH--cCCCCCCCCCCCC
Confidence 3445567899999999 999999999987654 4443 5 789999999999999999999999 8999999999999
Q ss_pred hHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCC---CCCccccccccHHHHHHH
Q 005095 235 TALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTK---EEDLKEEDRIELLVAVID 309 (715)
Q Consensus 235 TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga---~~~~~~~~g~t~L~~A~~ 309 (715)
||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++.+. +....+..+.|+++.+..
T Consensus 270 TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 270 GPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred CHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999999999999999986 899999999999999999999999998774 334455667787776554
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.1e-20 Score=166.50 Aligned_cols=107 Identities=27% Similarity=0.350 Sum_probs=94.0
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHH
Q 005095 194 ISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCM 273 (715)
Q Consensus 194 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~ 273 (715)
+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLS--KGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTT--TTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHH
Confidence 37889999999999999999999998 788999999999999999999999999999999999886 788889999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccccccccH
Q 005095 274 AALLGHKEMIWYLYSVTKEEDLKEEDRIEL 303 (715)
Q Consensus 274 A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 303 (715)
|+..|+.+++++|+++|+++|.++..|.+|
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 999999999999999999988888888776
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=4e-20 Score=206.33 Aligned_cols=134 Identities=19% Similarity=0.114 Sum_probs=114.4
Q ss_pred hHHHHHHHcCCHHHHHHHHhhCccchhhc-----cCCCCCcHHHHHHH---cCCHHHHHHHHhcCCCcccccccCCCChH
Q 005095 165 APLHLAALKGDWDFARNFFNLNPEAVCVR-----ISRNQDTALHIAAG---ARRTLFVQELVNLMTPEDLALRNKVGNTA 236 (715)
Q Consensus 165 T~Lh~Aa~~g~~~~v~~LL~~~~~~~~~~-----~d~~g~TpLh~Aa~---~g~~~iv~~Ll~~~~g~~i~~~d~~G~Tp 236 (715)
+.||.|+..|+.+.++.||+.+.+ ++.. .|..|.||||+||. .|+.++|++|++ +|+++|.+|..|+||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~--~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ--NGGHLDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH--HSCCTTCCCSSSCCH
T ss_pred HHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH--cCCCCCccCCCCCcH
Confidence 789999999999999999988754 3221 26789999999976 999999999999 899999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHH
Q 005095 237 LCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVI 308 (715)
Q Consensus 237 Lh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~ 308 (715)
||+|+..|+.++|++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++. +|+|.+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 999999999999999999999986 8999999999999999999999999999999876 4666654
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=7.5e-20 Score=154.62 Aligned_cols=93 Identities=23% Similarity=0.333 Sum_probs=88.4
Q ss_pred CCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHHHHcC
Q 005095 232 VGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAG 311 (715)
Q Consensus 232 ~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g 311 (715)
+|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 48999999999999999999999999986 79999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHhhCcc
Q 005095 312 LYDVALDLIQHHPQ 325 (715)
Q Consensus 312 ~~~iv~~Ll~~~~~ 325 (715)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999864
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=1.6e-19 Score=159.15 Aligned_cols=109 Identities=23% Similarity=0.244 Sum_probs=102.0
Q ss_pred cccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHHHHH
Q 005095 228 LRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAV 307 (715)
Q Consensus 228 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A 307 (715)
.+|.+|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 568899999999999999999999999999986 7899999999999999999999999999999999999999999999
Q ss_pred HHcCChhHHHHHHhhCcccceecCCCCCCHH
Q 005095 308 IDAGLYDVALDLIQHHPQLAMARDGNGETAL 338 (715)
Q Consensus 308 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 338 (715)
+..|+.+++++|+++|+++ +.++..|.||-
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADV-NARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSH-HHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcCCCC-CcCCccccccc
Confidence 9999999999999999996 88899998874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=1.9e-17 Score=144.63 Aligned_cols=89 Identities=21% Similarity=0.276 Sum_probs=67.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Q 005095 195 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA 274 (715)
Q Consensus 195 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~g~~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A 274 (715)
|.+|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A 97 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMA--NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-AQDKFGKTAFDIS 97 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHH--cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccccCCCcHHHHH
Confidence 6677777777777777777777777 677777777777777777777777777777777777765 6777777777777
Q ss_pred HHcCCHHHHHHH
Q 005095 275 ALLGHKEMIWYL 286 (715)
Q Consensus 275 ~~~g~~~iv~~L 286 (715)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=5.3e-17 Score=141.72 Aligned_cols=94 Identities=21% Similarity=0.210 Sum_probs=85.5
Q ss_pred ccccccCCCChHHHHHHHcCcHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccccccccHH
Q 005095 225 DLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELL 304 (715)
Q Consensus 225 ~i~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 304 (715)
.+...|.+|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHH
Confidence 345678899999999999999999999999999986 7899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChhHHHHH
Q 005095 305 VAVIDAGLYDVALDL 319 (715)
Q Consensus 305 ~~A~~~g~~~iv~~L 319 (715)
|+|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999876
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=28.31 E-value=96 Score=31.44 Aligned_cols=60 Identities=8% Similarity=-0.102 Sum_probs=27.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhC-ccchhhccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 005095 160 CFTSYAPLHLAALKGDWDFARNFFNLN-PEAVCVRISRNQDTALHIAAGARRTLFVQELVN 219 (715)
Q Consensus 160 ~~~g~T~Lh~Aa~~g~~~~v~~LL~~~-~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~ 219 (715)
|..|...+......|..+....+++.- +.......+..|.-.+..+......+-...+++
T Consensus 70 d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~ 130 (351)
T 3gvo_A 70 DVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVK 130 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHG
T ss_pred ChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHH
Confidence 444445555555555555444444321 111222235555555555555555444444444
No 116
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=24.33 E-value=4.1e+02 Score=24.32 Aligned_cols=22 Identities=9% Similarity=0.073 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHhHhhccCCCC
Q 005095 558 CMVVATLIATVMFAAAFTVPGG 579 (715)
Q Consensus 558 ~~vvA~LIATvtFaA~ft~PGG 579 (715)
+.+.++|++-.++-+.+.+|.+
T Consensus 23 ~alfaAliavla~i~~Ipip~~ 44 (198)
T 4dve_A 23 SAFMTAFIIILGFLPGIPIGFI 44 (198)
T ss_dssp HHHHHHHHHHHTTSCCBCCSSS
T ss_pred HHHHHHHHHHHHHhccCCCCCC
Confidence 3466777777777777788854
No 117
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=21.21 E-value=4.8e+02 Score=23.93 Aligned_cols=22 Identities=27% Similarity=0.667 Sum_probs=14.5
Q ss_pred hhH-HHHHhhhhHHHHHHHHHhh
Q 005095 680 VPV-SLFALLQFPLLSDMISHLY 701 (715)
Q Consensus 680 ~~~-~~~~~~~~~~~~~~~~~~~ 701 (715)
+|+ .+|+.+...+|-.+..+.|
T Consensus 155 iPv~i~F~~Fa~hFYrsL~~hk~ 177 (214)
T 4hkr_A 155 IPVMIIFMAFAIHFYRSLVSHKY 177 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 344 4566777788877776654
Done!