Your job contains 1 sequence.
>005098
MELVQEIVAFHMKHNAEPEAVDLLMEVEDLDLLVEHVDATNFKRTCLYLTSAAKYLPGPD
DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT
LELDDDMVPDDDDRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA
GASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAAS
LGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGRE
DACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEE
VAQAIIFALMDRSESELGEPLTRLIPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDM
TLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLE
HLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGT
NNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGI
VTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPVRVGQAVDVVGQA
GRPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDYREDH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005098
(714 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046016 - symbol:RPN1A "26S proteasome regulat... 2889 5.3e-301 1
TAIR|locus:2121358 - symbol:RPN1B "26S proteasome regulat... 2823 5.3e-294 1
RGD|1305752 - symbol:Psmd2 "proteasome (prosome, macropai... 975 3.7e-183 2
UNIPROTKB|P56701 - symbol:PSMD2 "26S proteasome non-ATPas... 974 4.8e-183 2
UNIPROTKB|E2RCP9 - symbol:PSMD2 "Uncharacterized protein"... 974 4.8e-183 2
UNIPROTKB|E7EW34 - symbol:PSMD2 "26S proteasome non-ATPas... 974 4.8e-183 2
UNIPROTKB|E9PCS3 - symbol:PSMD2 "26S proteasome non-ATPas... 974 4.8e-183 2
UNIPROTKB|Q13200 - symbol:PSMD2 "26S proteasome non-ATPas... 974 4.8e-183 2
UNIPROTKB|I3LEW5 - symbol:PSMD2 "Uncharacterized protein"... 974 4.8e-183 2
MGI|MGI:1096584 - symbol:Psmd2 "proteasome (prosome, macr... 974 4.8e-183 2
UNIPROTKB|Q5R9I6 - symbol:PSMD2 "26S proteasome non-ATPas... 973 6.1e-183 2
ZFIN|ZDB-GENE-040426-1480 - symbol:psmd2 "proteasome (pro... 968 7.0e-182 2
FB|FBgn0028695 - symbol:Rpn1 "Regulatory particle non-ATP... 918 6.9e-171 2
WB|WBGene00004458 - symbol:rpn-1 species:6239 "Caenorhabd... 786 5.6e-154 2
POMBASE|SPBP19A11.03c - symbol:mts4 "19S proteasome regul... 1478 1.8e-151 1
ASPGD|ASPL0000062698 - symbol:AN10020 species:162425 "Eme... 1430 2.2e-146 1
DICTYBASE|DDB_G0293752 - symbol:psmD2 "26S proteasome non... 1406 7.5e-144 1
CGD|CAL0006334 - symbol:RPN1 species:5476 "Candida albica... 710 3.9e-140 2
UNIPROTKB|F1P4P8 - symbol:PSMD2 "Uncharacterized protein"... 969 1.9e-123 2
SGD|S000001069 - symbol:RPN1 "Base subunit of the 19S reg... 586 4.5e-110 2
UNIPROTKB|E1BX02 - symbol:PSMD2 "Uncharacterized protein"... 969 7.1e-109 2
GENEDB_PFALCIPARUM|PFB0260w - symbol:PFB0260w "proteasome... 692 3.5e-68 1
UNIPROTKB|O96153 - symbol:PFB0260w "Proteasome 26S regula... 692 3.5e-68 1
UNIPROTKB|H9KZ05 - symbol:Gga.48069 "Uncharacterized prot... 503 3.7e-48 1
UNIPROTKB|H7C1H2 - symbol:PSMD2 "26S proteasome non-ATPas... 400 9.9e-37 1
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 229 2.6e-15 1
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 219 3.2e-14 1
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 202 2.3e-12 1
WB|WBGene00004459 - symbol:rpn-2 species:6239 "Caenorhabd... 200 8.0e-11 3
UNIPROTKB|Q18115 - symbol:rpn-2 "26S proteasome non-ATPas... 200 8.0e-11 3
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 185 8.0e-10 2
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 185 1.6e-09 2
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 173 3.9e-09 1
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 173 1.8e-08 2
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 147 2.2e-08 2
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 147 2.2e-08 2
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 146 2.8e-08 2
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 146 2.8e-08 2
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 146 2.8e-08 2
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 146 2.8e-08 2
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 146 2.8e-08 2
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 145 3.6e-08 2
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 145 3.6e-08 2
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 143 5.9e-08 2
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 142 5.9e-08 2
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 144 1.8e-07 3
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 123 3.8e-06 2
GENEDB_PFALCIPARUM|PF14_0632 - symbol:PF14_0632 "26S prot... 151 6.3e-06 2
UNIPROTKB|Q8IKH3 - symbol:PF14_0632 "26S proteasome subun... 151 6.3e-06 2
UNIPROTKB|C9JPC0 - symbol:PSMD2 "26S proteasome non-ATPas... 129 9.5e-06 1
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 139 6.7e-05 2
>TAIR|locus:2046016 [details] [associations]
symbol:RPN1A "26S proteasome regulatory subunit S2 1A"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0030163 "protein catabolic process"
evidence=TAS] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0051726 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
GO:GO:0043130 EMBL:AC007048 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:AY230828 EMBL:AF360216 EMBL:AY040061 EMBL:AK220903
IPI:IPI00529314 PIR:A84591 RefSeq:NP_565477.1 UniGene:At.22879
ProteinModelPortal:Q9SIV2 IntAct:Q9SIV2 STRING:Q9SIV2 PaxDb:Q9SIV2
PRIDE:Q9SIV2 EnsemblPlants:AT2G20580.1 GeneID:816580
KEGG:ath:AT2G20580 TAIR:At2g20580 InParanoid:Q9SIV2
PhylomeDB:Q9SIV2 ProtClustDB:CLSN2688277 Genevestigator:Q9SIV2
Uniprot:Q9SIV2
Length = 891
Score = 2889 (1022.0 bits), Expect = 5.3e-301, P = 5.3e-301
Identities = 564/713 (79%), Positives = 620/713 (86%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
MELVQ+IVAFHMKHNAE TNFKRTC YLTSAA+YLPGPD
Sbjct: 180 MELVQQIVAFHMKHNAETEAVDLLMDVEDLDLLLEHVDKTNFKRTCNYLTSAARYLPGPD 239
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
DMLVLDI+YMIY+KFEE+PNALQIALFLDN QYVKQ+FTSC DLL+KKQFCY++ARHGIT
Sbjct: 240 DMLVLDISYMIYMKFEEYPNALQIALFLDNTQYVKQVFTSCTDLLKKKQFCYMIARHGIT 299
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA 180
EL R ALQDIVNN KLSEGYLTLARDIEVME K+PEDIYKAHLLDGRAS+
Sbjct: 300 FELDDEMVADDDDREALQDIVNNTKLSEGYLTLARDIEVMEAKTPEDIYKAHLLDGRASS 359
Query: 181 GASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAAS 240
GASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD+++G SSGNWLFKNKEHGK SAAAS
Sbjct: 360 GASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSTTG-SSGNWLFKNKEHGKTSAAAS 418
Query: 241 LGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGRE 300
LGMI LWDVDSGL+Q+DKYFHS DN +IAGALLGVGIVNCGI+NDCDPALALL +Y+ +E
Sbjct: 419 LGMIQLWDVDSGLSQLDKYFHSNDNPIIAGALLGVGIVNCGIKNDCDPALALLGDYIDKE 478
Query: 301 DACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEE 360
D+ +RIGAIMGLGISYAG+QNDQIR+KLS ILNDAK+PLDVIAF+++SLG+IYVGSCNEE
Sbjct: 479 DSSVRIGAIMGLGISYAGSQNDQIRNKLSPILNDAKAPLDVIAFASLSLGMIYVGSCNEE 538
Query: 361 VAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDM 420
VAQ+IIFALMDRSE+ELG+ KQESVEATAEVSKTFNEKIRKYCDM
Sbjct: 539 VAQSIIFALMDRSEAELGDALTRFLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDM 598
Query: 421 TLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLE 480
TLLSCAYAGTGNVLKVQ+LL C +H EKG+ +QGPAVLG+AMVAM+EELG++M IRSLE
Sbjct: 599 TLLSCAYAGTGNVLKVQDLLAQCGEHLEKGDIHQGPAVLGLAMVAMSEELGVDMEIRSLE 658
Query: 481 HLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGT 540
+LQYGEQNIRRAVPLALGLLCISNPKV VMDTLSRLSHDTDSEVAM+A+ISLGLIG+GT
Sbjct: 659 RMLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAMSAIISLGLIGAGT 718
Query: 541 NNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGI 600
NNARIAGMLRNLSSYYYKD +LLFCVRIAQGLVHMGKGLLTL+P+HS+RFLLSPTALAGI
Sbjct: 719 NNARIAGMLRNLSSYYYKDMSLLFCVRIAQGLVHMGKGLLTLSPFHSERFLLSPTALAGI 778
Query: 601 VTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXX 660
VT L ACLDMK +I+GKYHYVLYFLVLAMQPRM+LTVDENLKPLS
Sbjct: 779 VTLLHACLDMKPIILGKYHYVLYFLVLAMQPRMMLTVDENLKPLSVPVRVGQAVDVVGQA 838
Query: 661 XXPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDYRED 713
PKTITGFQTHSTPVLLAAG+RAELAT+KYIPLSPILEGF+ILKENPDYRE+
Sbjct: 839 GRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILKENPDYREE 891
>TAIR|locus:2121358 [details] [associations]
symbol:RPN1B "26S proteasome regulatory subunit S2 1B"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0030163 EMBL:AL021749 EMBL:AL161572 GO:GO:0042176
UniGene:At.13247 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1 OMA:QWNINEG
ProtClustDB:CLSN2688277 EMBL:AY230829 IPI:IPI00657061 PIR:T04617
RefSeq:NP_194576.5 UniGene:At.32013 ProteinModelPortal:Q6XJG8
SMR:Q6XJG8 IntAct:Q6XJG8 STRING:Q6XJG8 PaxDb:Q6XJG8 PRIDE:Q6XJG8
EnsemblPlants:AT4G28470.1 GeneID:828964 KEGG:ath:AT4G28470
TAIR:At4g28470 InParanoid:Q6XJG8 PhylomeDB:Q6XJG8
Genevestigator:Q6XJG8 Uniprot:Q6XJG8
Length = 891
Score = 2823 (998.8 bits), Expect = 5.3e-294, P = 5.3e-294
Identities = 551/713 (77%), Positives = 611/713 (85%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
M+LVQ+IV+FHMKHNAE TNF+RTC YLTSAAKYLPGPD
Sbjct: 180 MDLVQQIVSFHMKHNAETEAVDLLMDVEDLDLLLEHVDNTNFRRTCNYLTSAAKYLPGPD 239
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
DMLVLDIAYMIY+KF E+PNALQIALFLDNMQYVKQ+FTSC DL++KKQFCY++ARHG+T
Sbjct: 240 DMLVLDIAYMIYIKFAEYPNALQIALFLDNMQYVKQVFTSCTDLVKKKQFCYMIARHGMT 299
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA 180
EL + ALQDIVNN KLSEGYLTLARDIEVME K+PEDIYKAHLLDGRAS+
Sbjct: 300 FELDQEMVANDEDKEALQDIVNNSKLSEGYLTLARDIEVMEAKTPEDIYKAHLLDGRASS 359
Query: 181 GASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAAS 240
G SVDSARQNL+ATFVNAFVNAGFGQDKLMTVPSD++SG S+GNWLFKNKEHGK SA AS
Sbjct: 360 GPSVDSARQNLSATFVNAFVNAGFGQDKLMTVPSDSTSG-SAGNWLFKNKEHGKTSAVAS 418
Query: 241 LGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGRE 300
LGMI LWDV++GL +DKYFHS DN V+AGALLGVGIVNCGI+NDCDPA ALLS Y+ E
Sbjct: 419 LGMIQLWDVETGLGHLDKYFHSNDNPVVAGALLGVGIVNCGIKNDCDPAFALLSGYIDNE 478
Query: 301 DACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEE 360
D+ +RIGAIMGLGI+YAG+QNDQI+ +LS ILNDA +PLDVIAF+A+SLG+IYVGSCNEE
Sbjct: 479 DSSVRIGAIMGLGIAYAGSQNDQIKIRLSPILNDANAPLDVIAFAALSLGMIYVGSCNEE 538
Query: 361 VAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDM 420
VAQ+IIFALMDRSE+ELGE KQESVEATAEVSKTFNEKIRKYCDM
Sbjct: 539 VAQSIIFALMDRSEAELGEALTRFLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDM 598
Query: 421 TLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLE 480
TLLSCAYAGTGNVLKVQ+LL C +H KG+ +QGPAV+G+AMVAM+EELGL+M IRSLE
Sbjct: 599 TLLSCAYAGTGNVLKVQDLLAQCGEHLVKGDIHQGPAVIGLAMVAMSEELGLDMEIRSLE 658
Query: 481 HLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGT 540
+LQYGEQNIRRAVPLALGLLCISNPKV VMDTLSRLSHDTDSEVAMAA+ISLGLIG+GT
Sbjct: 659 RVLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAMAAIISLGLIGAGT 718
Query: 541 NNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGI 600
NNARIAGMLRNLSSYYYKDA+LLFCVRIAQG VHMGKGLLTLNP+HS+R LLSPTALAGI
Sbjct: 719 NNARIAGMLRNLSSYYYKDASLLFCVRIAQGFVHMGKGLLTLNPFHSERLLLSPTALAGI 778
Query: 601 VTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXX 660
VT L ACLDMK++I+GKYHYVLYFLVLAMQPRM+LTVD++LKP+S
Sbjct: 779 VTLLHACLDMKSIILGKYHYVLYFLVLAMQPRMMLTVDQSLKPISVPVRVGQAVDVVGQA 838
Query: 661 XXPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDYRED 713
PKTITGFQTHSTPVLLAAG+RAELATEKYIPLSPILEGFVILKENPDYRE+
Sbjct: 839 GRPKTITGFQTHSTPVLLAAGERAELATEKYIPLSPILEGFVILKENPDYREE 891
>RGD|1305752 [details] [associations]
symbol:Psmd2 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 RGD:1305752 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 Pfam:PF01851 CTD:5708 eggNOG:COG5110
GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 EMBL:BC099135 IPI:IPI00370456
RefSeq:NP_001026809.1 UniGene:Rn.29909 IntAct:Q4FZT9 STRING:Q4FZT9
PhosphoSite:Q4FZT9 PRIDE:Q4FZT9 Ensembl:ENSRNOT00000002358
GeneID:287984 KEGG:rno:287984 InParanoid:Q4FZT9 NextBio:627355
Genevestigator:Q4FZT9 Uniprot:Q4FZT9
Length = 908
Score = 975 (348.3 bits), Expect = 3.7e-183, Sum P(2) = 3.7e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYSKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 3.7e-183, Sum P(2) = 3.7e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>UNIPROTKB|P56701 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851
EMBL:BT030686 EMBL:BC105524 IPI:IPI00710615 RefSeq:NP_001094667.1
UniGene:Bt.20443 STRING:P56701 PRIDE:P56701
Ensembl:ENSBTAT00000007436 GeneID:539784 KEGG:bta:539784 CTD:5708
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 InParanoid:P56701 KO:K03028 OMA:IAQGLTH
OrthoDB:EOG483D3X NextBio:20878217 PANTHER:PTHR10943:SF1
Uniprot:P56701
Length = 908
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>UNIPROTKB|E2RCP9 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 CTD:5708
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 EMBL:AAEX03017275 RefSeq:XP_535824.3
Ensembl:ENSCAFT00000020103 GeneID:478654 KEGG:cfa:478654
NextBio:20853959 Uniprot:E2RCP9
Length = 908
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>UNIPROTKB|E7EW34 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC078797 Pfam:PF01851
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2 IPI:IPI00926258
ProteinModelPortal:E7EW34 PRIDE:E7EW34 Ensembl:ENST00000439383
ArrayExpress:E7EW34 Bgee:E7EW34 Uniprot:E7EW34
Length = 778
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 55 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 114
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 115 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 174
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 175 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 230
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 231 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 281
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 282 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 341
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 342 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 401
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 402 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 461
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 462 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 494
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 518 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 577
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 578 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 637
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 638 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 697
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 698 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 757
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 758 LPVTPILEGFVILRKNPNY 776
>UNIPROTKB|E9PCS3 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC078797 Pfam:PF01851
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2 IPI:IPI00926410
ProteinModelPortal:E9PCS3 PRIDE:E9PCS3 Ensembl:ENST00000435761
UCSC:uc011brj.1 ArrayExpress:E9PCS3 Bgee:E9PCS3 Uniprot:E9PCS3
Length = 749
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 26 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 85
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 86 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 145
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 146 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 201
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 202 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 252
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 253 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 312
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 313 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 372
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 373 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 432
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 433 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 465
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 489 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 548
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 549 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 608
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 609 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 668
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 669 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 728
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 729 LPVTPILEGFVILRKNPNY 747
>UNIPROTKB|Q13200 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0005838 "proteasome regulatory particle" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 Pfam:PF01851 CTD:5708 eggNOG:COG5110
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 EMBL:D78151 EMBL:BT009736 EMBL:BC002368
EMBL:BC002997 EMBL:BC007897 EMBL:U12596 EMBL:X86446 IPI:IPI00012268
RefSeq:NP_002799.3 UniGene:Hs.518464 ProteinModelPortal:Q13200
SMR:Q13200 IntAct:Q13200 MINT:MINT-1142723 STRING:Q13200
PhosphoSite:Q13200 DMDM:6174930 PaxDb:Q13200 PeptideAtlas:Q13200
PRIDE:Q13200 DNASU:5708 Ensembl:ENST00000310118 GeneID:5708
KEGG:hsa:5708 UCSC:uc003fnn.1 GeneCards:GC03P184016 HGNC:HGNC:9559
HPA:HPA045192 MIM:606223 neXtProt:NX_Q13200 PharmGKB:PA33905
InParanoid:Q13200 PhylomeDB:Q13200 ChiTaRS:PSMD2 GenomeRNAi:5708
NextBio:22178 ArrayExpress:Q13200 Bgee:Q13200 CleanEx:HS_PSMD2
Genevestigator:Q13200 GermOnline:ENSG00000175166 Uniprot:Q13200
Length = 908
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>UNIPROTKB|I3LEW5 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 CTD:5708 GeneTree:ENSGT00550000074983
KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1 EMBL:FP312667
RefSeq:NP_001230406.1 UniGene:Ssc.1642 Ensembl:ENSSSCT00000024405
GeneID:100627568 KEGG:ssc:100627568 Uniprot:I3LEW5
Length = 908
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>MGI|MGI:1096584 [details] [associations]
symbol:Psmd2 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0022624 "proteasome accessory complex" evidence=IDA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
MGI:MGI:1096584 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851 CTD:5708
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 ChiTaRS:PSMD2 EMBL:BC021508 EMBL:BC024830
EMBL:BC027388 EMBL:BC027767 EMBL:BC027822 EMBL:BC028851
EMBL:BC031128 IPI:IPI00123494 RefSeq:NP_598862.1 UniGene:Mm.243234
ProteinModelPortal:Q8VDM4 SMR:Q8VDM4 IntAct:Q8VDM4 STRING:Q8VDM4
PhosphoSite:Q8VDM4 PaxDb:Q8VDM4 PRIDE:Q8VDM4
Ensembl:ENSMUST00000007212 GeneID:21762 KEGG:mmu:21762
InParanoid:Q8VDM4 NextBio:301080 Bgee:Q8VDM4 Genevestigator:Q8VDM4
GermOnline:ENSMUSG00000006998 Uniprot:Q8VDM4
Length = 908
Score = 974 (347.9 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 197/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 4.8e-183, Sum P(2) = 4.8e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>UNIPROTKB|Q5R9I6 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851 CTD:5708
HOVERGEN:HBG001842 KO:K03028 PANTHER:PTHR10943:SF1 EMBL:CR859401
EMBL:CR859332 RefSeq:NP_001125887.1 UniGene:Pab.19003
ProteinModelPortal:Q5R9I6 PRIDE:Q5R9I6 GeneID:100172819
KEGG:pon:100172819 Uniprot:Q5R9I6
Length = 908
Score = 973 (347.6 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 196/453 (43%), Positives = 286/453 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EI+ ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIIPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+R+G+I GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL + K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 824 (295.1 bits), Expect = 6.1e-183, Sum P(2) = 6.1e-183
Identities = 155/259 (59%), Positives = 203/259 (78%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 708 DTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 767
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD++ +I+GK HYVLY LV AMQP
Sbjct: 768 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQP 827
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PKTITGFQTH+TPVLLA G+RAELATE++
Sbjct: 828 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEF 887
Query: 692 IPLSPILEGFVILKENPDY 710
+P++PILEGFVIL++NP+Y
Sbjct: 888 LPVTPILEGFVILRKNPNY 906
>ZFIN|ZDB-GENE-040426-1480 [details] [associations]
symbol:psmd2 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 2" species:7955 "Danio rerio" [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 ZFIN:ZDB-GENE-040426-1480
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 CTD:5708 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 PANTHER:PTHR10943:SF1 EMBL:BC056516
IPI:IPI00507875 RefSeq:NP_956840.1 UniGene:Dr.78209
ProteinModelPortal:Q6PHK7 PRIDE:Q6PHK7 GeneID:393518
KEGG:dre:393518 InParanoid:Q6PHK7 NextBio:20814544 Bgee:Q6PHK7
Uniprot:Q6PHK7
Length = 897
Score = 968 (345.8 bits), Expect = 7.0e-182, Sum P(2) = 7.0e-182
Identities = 197/450 (43%), Positives = 284/450 (63%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
++LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 175 LKLVKEIVPYNMAHNAEHEACDLLMEIERLDMLDSYIDENAYAKVCLYLTSCVSYVPEPE 234
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A I+ KF +P AL++AL L++++ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 235 NSALLKCALNIFRKFNRYPEALRLALMLNDVELVENIFTSCKDIVIQKQMAFMLGRHGMF 294
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 295 LELNEDVEDYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 350
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 351 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------EDGNKWLYKNKDHGMLSAA 401
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLGMILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 402 ASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 461
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+RIGAI GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 462 HNSNIMRIGAIFGLGLAYAGSNREDVLSLLLPVMGDSKSSMEVAGVTALACGMIAVGSCN 521
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE EL + K E++E T + E R +
Sbjct: 522 GDVTSTILQTIMEKSEQELKDTCARWLPLGLGLNHLGKGEAIETTLAALQVVPEPFRSFG 581
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHE 448
+ + CAYAG+GNVLKVQ LL C++H +
Sbjct: 582 NTLVDVCAYAGSGNVLKVQQLLHICSEHFD 611
Score = 819 (293.4 bits), Expect = 7.0e-182, Sum P(2) = 7.0e-182
Identities = 155/259 (59%), Positives = 202/259 (77%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
++QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 637 SHQGVAVLGIALIAMGEEIGSEMALRTFGHLLRYGESTLRRAVPLALALISVSNPRLNIL 696
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQG 571
DTLS+ SHD D EV+ ++ ++GL+GSGTNNAR+A MLR L+ Y+ KD N LF VR+AQG
Sbjct: 697 DTLSKFSHDADPEVSHNSIFAMGLVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQG 756
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQP 631
L H+GKG LTL PYHSDR L+S A+AG++T L + LD+K +I+GK HY+LY LV AMQP
Sbjct: 757 LTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVKNLILGKSHYILYGLVAAMQP 816
Query: 632 RMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKY 691
RML+T DE L+PL PK ITGFQTH+TPVLLA G+RAELATE++
Sbjct: 817 RMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKAITGFQTHTTPVLLAHGERAELATEEF 876
Query: 692 IPLSPILEGFVILKENPDY 710
IP++PILEGFVIL++NP+Y
Sbjct: 877 IPVTPILEGFVILRKNPNY 895
>FB|FBgn0028695 [details] [associations]
symbol:Rpn1 "Regulatory particle non-ATPase 1" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:AE014296 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008283 GO:GO:0006508 GO:GO:0050790
GO:GO:0004175 GO:GO:0042176 GO:GO:0000022 GO:GO:0008540
BRENDA:3.4.25.1 Pfam:PF01851 eggNOG:COG5110
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 CTD:6184 EMBL:AF132182 EMBL:AF145304
RefSeq:NP_649158.1 UniGene:Dm.3192 IntAct:Q9VW54 MINT:MINT-294744
STRING:Q9VW54 EnsemblMetazoa:FBtr0074893 GeneID:40174
KEGG:dme:Dmel_CG7762 UCSC:CG7762-RA FlyBase:FBgn0028695
InParanoid:Q9VW54 OrthoDB:EOG4R228T GenomeRNAi:40174 NextBio:817408
Uniprot:Q9VW54
Length = 919
Score = 918 (328.2 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 189/458 (41%), Positives = 281/458 (61%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ELV++I+ ++M+HNAE + + R CLYL S Y+P PD
Sbjct: 181 IELVKQIIPYNMEHNAEADACDLLIEIDHLHLLSDFVDESAYPRVCLYLQSCYPYVPDPD 240
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ ++L+ A + KF ++ A+++AL L++M + +IF + +KQ ++LAR I
Sbjct: 241 NTIILETALQLSRKFNQYTQAMRLALMLNDMDKIGEIFKEPKEPAMQKQLAFMLARQQIC 300
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRAS- 179
LEL L +I++N L++ +L LAR++++MEPK+PEDIYK+HL + R+
Sbjct: 301 LELDELVPDYDD----LMEIMSNANLNKHFLNLARELDIMEPKTPEDIYKSHLDNSRSRF 356
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAA 239
A VDSA+QNLAA+FVN FVNAGFG DKL+ S G+ WL+KNKEHG +SA A
Sbjct: 357 ASIQVDSAKQNLAASFVNGFVNAGFGVDKLL------SEDGNK--WLYKNKEHGMLSATA 408
Query: 240 SLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGR 299
SLG+ILLWDVD GL IDKY +STD+++ +GALL GIVNCGIRN+ DPA ALLS+Y+
Sbjct: 409 SLGLILLWDVDGGLTMIDKYLYSTDDNIKSGALLACGIVNCGIRNEVDPAHALLSDYIDN 468
Query: 300 EDACIRIGAIMGLGISYAGTQNDQIRHKLSTIL-----NDAKSPLDVIAFSAISLGLIYV 354
+++C+R+GAI+GLGI+YAG+ + L T+ N + + ++++ +A+SLGLI V
Sbjct: 469 QNSCMRVGAILGLGIAYAGSNRSIVIDTLKTVFSFGSNNKSSASVEILGITALSLGLISV 528
Query: 355 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKI 414
GSCN E+ + ++ +M ++++L + +Q+S EA + E
Sbjct: 529 GSCNSEITEILLQTIMGLTKADLKDTYTRFLFLGLGLLYLGRQKSTEAVMMTLEVLEEPY 588
Query: 415 RKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEA 452
R + CAYAGTGNVLK+Q LL C+ H+E A
Sbjct: 589 RSMATTMVDICAYAGTGNVLKIQQLLHICSDHYETSSA 626
Score = 765 (274.4 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 151/267 (56%), Positives = 200/267 (74%)
Query: 445 QHHEKG-EAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCI 503
+ EK A Q AVLGIA++AM E++G EMA RS +LL+Y E IRRAVPLALGL+
Sbjct: 651 KEREKDLSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISA 710
Query: 504 SNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLL 563
SNPK+N++DTLS+ SHD+D+EVA A+ ++GL+G+GTNNAR+A MLR L+ Y+ KD + L
Sbjct: 711 SNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQYHSKDPSNL 770
Query: 564 FCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLY 623
F VRIAQ L H+GKG L+L+PYHSDR L++P A+AG++ TL + LD+K +I+ + HY+LY
Sbjct: 771 FMVRIAQSLTHLGKGTLSLSPYHSDRQLMNPMAVAGLMATLVSLLDVKNLILNRSHYLLY 830
Query: 624 FLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDR 683
LV AMQ RML+T DE L L PKTITGFQTH+TPVLLA G+R
Sbjct: 831 TLVPAMQARMLITFDEELNQLQVPVRVGIAIDVVGQAGKPKTITGFQTHTTPVLLAIGER 890
Query: 684 AELATEKYIPLSPILEGFVILKENPDY 710
AELAT++Y+ L+P++EGFVILK+NP++
Sbjct: 891 AELATDEYLALTPVMEGFVILKKNPNF 917
>WB|WBGene00004458 [details] [associations]
symbol:rpn-1 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0000003
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:FO080211
Pfam:PF01851 eggNOG:COG5110 GeneTree:ENSGT00550000074983
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
PIR:T32707 RefSeq:NP_501064.1 ProteinModelPortal:Q9GZH5
IntAct:Q9GZH5 MINT:MINT-210711 STRING:Q9GZH5 PaxDb:Q9GZH5
EnsemblMetazoa:T22D1.9.1 EnsemblMetazoa:T22D1.9.2 GeneID:177455
KEGG:cel:CELE_T22D1.9 UCSC:T22D1.9.1 CTD:177455 WormBase:T22D1.9
InParanoid:Q9GZH5 NextBio:896900 Uniprot:Q9GZH5
Length = 981
Score = 786 (281.7 bits), Expect = 5.6e-154, Sum P(2) = 5.6e-154
Identities = 172/459 (37%), Positives = 264/459 (57%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
++L Q+IV+ HMKHNAE + +R CLYL S A P PD
Sbjct: 172 LKLTQDIVSHHMKHNAEVEACDLLIEIERIDLLISYVQEVDHQRVCLYLLSCAPLTPDPD 231
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+++++ A +YLKF + A++ A+ ++++ V QIF D L +KQ +L RH I
Sbjct: 232 NIILIRTALQLYLKFNRYLEAVRCAIMVNDIPQVHQIFAKASDPLLRKQMAILLGRHQIF 291
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA 180
L+ AL ++ +N L E + +LAR++++MEPK+PE IYK+HL R
Sbjct: 292 LDYEGSADSD-----ALAELNSNAHLYEYFHSLARELDIMEPKTPEGIYKSHLEHSRPFG 346
Query: 181 G-ASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAA 239
A DS R NLAA VN FVN GFG DK+M +AS W +KNKE+G ++AAA
Sbjct: 347 NSAQPDSTRMNLAAALVNGFVNCGFGVDKMMAETEEAS------RWFYKNKEYGMLTAAA 400
Query: 240 SLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGR 299
S G+I WD+D+GLAQ D++ + D+++ AG LL +GI++ GI++ CDPA ALL ++V
Sbjct: 401 SQGLIWRWDIDTGLAQCDRFLYINDDYIKAGTLLAIGIISSGIQDACDPASALLLDHVQS 460
Query: 300 EDACIRIGAIMGLGISYAG------TQNDQ--IRHKLSTILNDAK-SPL-DVIAFSAISL 349
+ + +R+G+I+GLG++YA T+N++ + +L +L+D K S + +V + +SL
Sbjct: 461 DRSIMRVGSILGLGLAYANSKRETVTKNEERGVIFELKKVLSDQKPSAIPEVKGLAGLSL 520
Query: 350 GLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKT 409
GLI VG+ + E A ++ ALMD+SE+EL +P Q+ + E ++
Sbjct: 521 GLILVGTADAEAAMEMLQALMDKSETELTDPNMRFLALGIALIFLQTQDKSDVFVESLRS 580
Query: 410 FNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHE 448
+ + CAYAGTGNVLK+Q LL C++H+E
Sbjct: 581 LPDPFGAMVSTLVEVCAYAGTGNVLKIQKLLHLCSEHYE 619
Score = 737 (264.5 bits), Expect = 5.6e-154, Sum P(2) = 5.6e-154
Identities = 145/265 (54%), Positives = 196/265 (73%)
Query: 454 QGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDT 513
Q AVLGI ++AM +++G +MA+R HL++YGE IRRAVPLAL LL +SNP++N+++T
Sbjct: 709 QAVAVLGIGLIAMGDDIGSQMALRMFGHLIRYGEPVIRRAVPLALSLLSVSNPQLNILET 768
Query: 514 LSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLV 573
LS+ SHD+D++ A A+ ++GL+G+GTNNAR+ MLRNL+SY+YKD L VRIAQGL
Sbjct: 769 LSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAMLRNLASYHYKDQVSLMLVRIAQGLT 828
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVG-KYHYVLYFLVLAMQPR 632
H+GKG +TLNP+HSDR LLSP+ALA +++ F+ LD I+ + HY+LY LVLAMQPR
Sbjct: 829 HLGKGTMTLNPWHSDRQLLSPSALASLLSICFSFLDANNTILNNRQHYLLYTLVLAMQPR 888
Query: 633 MLLT-VDENLKP-----LSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAEL 686
ML T V++ +KP L+ PKTITGFQTH+TPVLLA G+RAEL
Sbjct: 889 MLTTLVEDEMKPGSLKQLNVSVRVGQAVDVVAQAGKPKTITGFQTHTTPVLLAHGERAEL 948
Query: 687 ATEKYIPLSPILEGFVILKENPDYR 711
A ++Y+ ++P LEG VILK+NPDY+
Sbjct: 949 ANDEYLSVTPHLEGLVILKKNPDYQ 973
>POMBASE|SPBP19A11.03c [details] [associations]
symbol:mts4 "19S proteasome regulatory subunit Mts4"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
PomBase:SPBP19A11.03c INTERPRO:IPR002015 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0043161 EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0042176 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:Y09819 PIR:T52488 RefSeq:NP_596171.1 ProteinModelPortal:P87048
IntAct:P87048 STRING:P87048 EnsemblFungi:SPBP19A11.03c.1
GeneID:2541268 KEGG:spo:SPBP19A11.03c OrthoDB:EOG4P8JSC
NextBio:20802380 Uniprot:P87048
Length = 891
Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
Identities = 305/715 (42%), Positives = 440/715 (61%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
MEL IV F + HNAE N R CLY+TS LP P+
Sbjct: 187 MELALTIVPFFLTHNAEADAIDLLQELGAIEKVVPFVELDNASRVCLYITSCVNLLPFPE 246
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
D+ +L A+ IY KF++ AL +A+ LD+M +K+ + D L KKQ Y+LAR I
Sbjct: 247 DVAMLRTAHAIYRKFDQLTQALNVAIRLDDMSLIKEDCEAATDPLLKKQMSYMLARQQIP 306
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA 180
+++ L D +NN LS+ + L +++ +M+PK PEDI+K HL R
Sbjct: 307 MDMGDEE---------LNDALNNTHLSDHFHYLGKELNLMDPKVPEDIFKTHLEVARTGL 357
Query: 181 GAS-VDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAA 239
GAS V SA+QNLA TFVNA VNAG+ D+L+ V + +S W++KNKE G +SA A
Sbjct: 358 GASGVYSAKQNLANTFVNALVNAGYSNDRLILVDDEKTS------WIYKNKESGLISATA 411
Query: 240 SLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGR 299
S+G++ LW+VD GL+ +DKY +S++ + AGALLG+G+ N +RN+ DPA+A+LSEY+
Sbjct: 412 SIGLLQLWNVDMGLSLLDKYLYSSEENTKAGALLGIGVTNVAVRNEADPAMAILSEYLET 471
Query: 300 EDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNE 359
+R AI+GLG++Y+G + + LS I+ D P+ + +A+SLGLI+VG+CN
Sbjct: 472 GSVKLRASAILGLGLAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSLGLIFVGTCNG 531
Query: 360 EVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCD 419
+VA I+ LM+R ES + KQ+ +AT E K KI + +
Sbjct: 532 DVASTILQTLMEREESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQAE 591
Query: 420 MTLLSCAYAGTGNVLKVQNLLGHCAQH-----HEKGEAYQGPAVLGIAMVAMAEELGLEM 474
+ + C+YAGTGNVL +Q LL C++ E Q A LG+A +AM E++G EM
Sbjct: 592 ILVDICSYAGTGNVLHIQKLLHICSEPPSDDAKESETTIQTFAALGVATIAMGEDIGAEM 651
Query: 475 AIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLG 534
+R +H++ YGE +IR+A+PLALGLL SNP++ + DTLSR SHD D +VA A+ ++G
Sbjct: 652 VLRHFDHMMHYGEPSIRKAIPLALGLLSASNPQMRIFDTLSRYSHDNDLDVAYNAIFAMG 711
Query: 535 LIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSP 594
L+G+GT+NAR+A +LR L+SYY+K++N LF VRIAQGL+++GKG +TLNPYH++R +L
Sbjct: 712 LVGAGTSNARLAQLLRQLASYYHKESNALFMVRIAQGLLYLGKGTMTLNPYHTERQILGQ 771
Query: 595 TALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXX 654
TA AG++T + A LD ++ H++LY + LA++PRML+T+ E+ + L
Sbjct: 772 TAFAGLMTVVLAMLDANTFVLDTSHWLLYAITLAIRPRMLITLGEDGQYLPVSVRVGQAV 831
Query: 655 XXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPD 709
PK ITG+ TH+TPVLL +RAELATE Y PL+ LEG VILK+N +
Sbjct: 832 DVVGQAGRPKVITGWVTHTTPVLLHHNERAELATEAYTPLTS-LEGIVILKKNTE 885
>ASPGD|ASPL0000062698 [details] [associations]
symbol:AN10020 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
EMBL:BN001308 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
Pfam:PF01851 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EnsemblFungi:CADANIAT00002622 Uniprot:C8VQJ9
Length = 906
Score = 1430 (508.4 bits), Expect = 2.2e-146, P = 2.2e-146
Identities = 293/722 (40%), Positives = 443/722 (61%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
++L +V + ++HNAE + R CLY+ S L P+
Sbjct: 192 IKLAVSLVPYFLRHNAEADAVDLMSELEIIEEIPQFVDENTYSRVCLYMVSMVPLLTYPE 251
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
D L A+ IY++++E A+ +A+ L+++ +K + D KKQ ++++R I
Sbjct: 252 DHQFLRTAHEIYVRYKELTKAIVLAIRLNDVDLIKSDLEATSDRSLKKQMAFLVSRQQIW 311
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA 180
L+ + +NN + + + +L +++ +++P PEDIYK HL R +
Sbjct: 312 LD----DLGDDEQDETFMECLNNTSIPKHFKSLGKELNILDPIMPEDIYKTHLESSRGAG 367
Query: 181 GASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAAS 240
+VDSAR NLA+ FVNAF NAGFG D++M V D G+W++K K+ G +S AS
Sbjct: 368 LTNVDSARHNLASAFVNAFANAGFGNDEMMIVEGD------KGSWVWKTKDDGMLSTTAS 421
Query: 241 LGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALL--SEYVG 298
+GM+L DVD+GL +IDKY +++++ + AGALL +GI+N G+R D DPALALL +E +
Sbjct: 422 MGMLLHRDVDTGLDKIDKYTYASEDQIKAGALLSIGILNSGVRLDSDPALALLCDNENLE 481
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
++ +R+ IMGLG++YAG+ +I L I+ D + + A +A+SLGL++VGS N
Sbjct: 482 AKNIPMRVATIMGLGLAYAGSNKQEILDALLPIVEDVSLDMQLSAMAAVSLGLVFVGSSN 541
Query: 359 EEVAQAIIFALMDRS-ESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKY 417
+V++AI LMD + +L + +QE V+ ++ K + + K
Sbjct: 542 HQVSEAIATTLMDEERQKQLKDKWTRFMALGLALLYFGRQEEVDVILDILKAVDHPMAKP 601
Query: 418 CDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGP------AVLGIAMVAMAEELG 471
+ CA+AGTG VLK+Q LL C E+ + QG AVLG++++AM E++G
Sbjct: 602 TSVLASVCAWAGTGTVLKLQELLHICNDVIEESDEKQGEELVQSYAVLGLSLIAMGEDVG 661
Query: 472 LEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVI 531
+M +R HL+ YG NIR+AVPLA+GL+ SNP++ V DTLSR SHD D++VA+ A+
Sbjct: 662 QDMILRQFGHLMHYGASNIRKAVPLAMGLISPSNPQMKVYDTLSRYSHDNDNDVAINAIF 721
Query: 532 SLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFL 591
++GL G+GT N+R+A +LR L+SYY++D N LF VRIAQGL+HMGKG +TLNP+H+DR +
Sbjct: 722 AMGLCGAGTKNSRLAQLLRQLASYYHRDQNSLFMVRIAQGLLHMGKGTMTLNPFHTDRQV 781
Query: 592 LSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXX 651
LS + AG++T L + +D K I+ ++HY+LYFL+ AM PR L+T+DE+L+PL
Sbjct: 782 LSRVSAAGLLTVLVSLIDAKQFILAEHHYLLYFLITAMYPRFLVTLDEDLQPLPVNVRVG 841
Query: 652 XXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDYR 711
PKTITG+QT STPVLL+ G+RAEL EKYIPLS LEG VIL++NP++
Sbjct: 842 QAVDVVGQAGRPKTITGWQTQSTPVLLSYGERAELEDEKYIPLSSTLEGLVILRKNPNWE 901
Query: 712 ED 713
E+
Sbjct: 902 EE 903
>DICTYBASE|DDB_G0293752 [details] [associations]
symbol:psmD2 "26S proteasome non-ATPase regulatory
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 dictyBase:DDB_G0293752
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234
GenomeReviews:CM000155_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0006972 GO:GO:0004175
GO:GO:0006511 GO:GO:0042176 EMBL:AAFI02000219 GO:GO:0005838
Pfam:PF01851 eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_628968.1 STRING:Q54BC6 PRIDE:Q54BC6
EnsemblProtists:DDB0232978 GeneID:8629396 KEGG:ddi:DDB_G0293752
OMA:QWNINEG ProtClustDB:CLSZ2429221 Uniprot:Q54BC6
Length = 893
Score = 1406 (500.0 bits), Expect = 7.5e-144, P = 7.5e-144
Identities = 283/574 (49%), Positives = 385/574 (67%)
Query: 136 ALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATF 195
++ DI+NN KLSE ++ LA D+++ EPK PE+I+++HL D S A DSAR NLA++F
Sbjct: 323 SISDIINNSKLSEYFMNLATDLDIREPKLPEEIFQSHL-D---STSAIADSARMNLASSF 378
Query: 196 VNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQ 255
VNAFVNAGFG+DKLMT D W FKN+E G +S AS GM++LWD+D GL +
Sbjct: 379 VNAFVNAGFGKDKLMTAEEDTK-------WWFKNRELGILSTVASTGMVVLWDIDGGLTK 431
Query: 256 IDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGIS 315
IDK+ +S + H GAL+ +G++ GIR++ DPAL+LL+E++ + RI AI GLG++
Sbjct: 432 IDKFLYSQEKHCSNGALMAIGMLTSGIRSEMDPALSLLAEHINSSNTGTRISAIFGLGLA 491
Query: 316 YAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSES 375
YAGTQ + LS L+D K ++ I ++LGLI++GSC+ E++ + L+ R +
Sbjct: 492 YAGTQRQDLMSLLSPCLDDDKEKMEFIGIVGLALGLIFIGSCDPELSTLFVQTLIQRGTA 551
Query: 376 ELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK 435
E KQ++ E E K K +Y +T+ +CAYAGTGNVLK
Sbjct: 552 A-SESHARFLHLGLGLLYLGKQDAAELALETLKAIEGKGGEYARLTVEACAYAGTGNVLK 610
Query: 436 VQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVP 495
VQN+L C+ E + G AVL IA++AM EELG +M +R +HLLQ G +I+RA+P
Sbjct: 611 VQNMLHFCSDGQEN--PHHGLAVLSIALIAMGEELGSDMCLRMFDHLLQKGNVHIKRAIP 668
Query: 496 LALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSY 555
LALGLL SNP++ +MD LS+LSHD D EVA A++SLGLIG+GTNNARI GMLR L+ +
Sbjct: 669 LALGLLSPSNPRIAIMDILSKLSHDNDPEVAQGAILSLGLIGAGTNNARIGGMLRALAVF 728
Query: 556 YYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIV 615
Y KD +L F VRIAQGL+H+GKG +T+NPYHSDR L+SP A+ G++ L A LD+K ++
Sbjct: 729 YGKDVHLFF-VRIAQGLLHLGKGTMTINPYHSDRTLMSPVAVGGLLALLHAGLDIKNILS 787
Query: 616 GKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTP 675
+ HY+ + +V +M PRML+T+DE+LKPL PKTITGFQTH+TP
Sbjct: 788 TQSHYLFFSIVCSMYPRMLMTLDEDLKPLPVSVRVGQSVDIVGLAGKPKTITGFQTHTTP 847
Query: 676 VLLAAGDRAELATEKYIPLSPILEGFVILKENPD 709
VLL +RAELAT+ YIPL+ ILEG VILK NP+
Sbjct: 848 VLLGYNERAELATDDYIPLTNILEGIVILKPNPN 881
Score = 386 (140.9 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 85/217 (39%), Positives = 128/217 (58%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
++LV EIV F M HNAEP N+ R CLYL + Y+PGPD
Sbjct: 195 LKLVDEIVPFQMTHNAEPEACDLLLEVEQLSKIFQYIDENNYSRVCLYLFKCSYYVPGPD 254
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLR-KKQFCYILARHGI 119
D+ +L + IY+K +++P+AL++A+ + + + + +IF ++ +Q +++AR I
Sbjct: 255 DINILKVCVEIYIKMKQYPDALRVAMKISDPELITEIFKLVENNKSILQQLGFLVARQKI 314
Query: 120 TLELXXXXXXXXXXRY-ALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRA 178
+ Y ++ DI+NN KLSE ++ LA D+++ EPK PE+I+++HL D
Sbjct: 315 VPD---------NFNYDSISDIINNSKLSEYFMNLATDLDIREPKLPEEIFQSHL-D--- 361
Query: 179 SAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD 215
S A DSAR NLA++FVNAFVNAGFG+DKLMT D
Sbjct: 362 STSAIADSARMNLASSFVNAFVNAGFGKDKLMTAEED 398
>CGD|CAL0006334 [details] [associations]
symbol:RPN1 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 CGD:CAL0006334
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 EMBL:AACQ01000010 GO:GO:0042176 Pfam:PF01851
eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1 RefSeq:XP_722167.1
STRING:Q5AL21 GeneID:3636147 KEGG:cal:CaO19.4956 Uniprot:Q5AL21
Length = 994
Score = 710 (255.0 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 156/445 (35%), Positives = 240/445 (53%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
++L +IV F +KHNAE F R CLY+TS YL PD
Sbjct: 185 VKLALQIVPFFLKHNAEADAVDLLLEIECIDKLPQFVDENTFARVCLYVTSCVPYLAPPD 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
D+ L+ AY IYL + AL +A+ LD+ + +KQ+F S D KQ +IL++
Sbjct: 245 DVSFLNTAYSIYLSHNQLTQALTLAIKLDDNELIKQVFDSTTDESLHKQLGFILSQQNSN 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASA 180
+ +Q+ ++NVKL+E + L +++ +++PK PED+YK+HL + +
Sbjct: 305 FKYPGENPE-------VQECISNVKLAEYFQYLVKELNLLDPKVPEDVYKSHLENSKFGL 357
Query: 181 GAS--VDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAA 238
G S +DSA+QNLAA+FVN F+N GFG DKL+ D S W+++ K G S
Sbjct: 358 GTSGSIDSAKQNLAASFVNGFLNLGFGNDKLVQTEEDNKS------WIYRTKGSGMASTT 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLG I W+++ GL +DKY +S D+ V AGALLG G+V+ + ++ D A ALL EYV
Sbjct: 412 ASLGSIHQWNINEGLQVLDKYTYSEDSEVKAGALLGTGVVSANVHDEVDAAFALLQEYVH 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+ + AI GLGI++AG+ N+ + + L +++D L++ +A++LG I+VG+C+
Sbjct: 472 EPNKLYQTAAINGLGIAFAGSANEDVLNLLLPLVSDLDISLEISCLAALALGHIFVGTCH 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ L++R ++L + E E E I K
Sbjct: 532 GDVTSTILQTLLERDYTQLTNKFIKFMSLGLGLLYMGRTEQAEDVLETIDAIEHPISKTL 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHC 443
+ + CA+AGTGNVL++Q LL C
Sbjct: 592 KVLVNICAFAGTGNVLQIQALLQMC 616
Score = 682 (245.1 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 140/271 (51%), Positives = 188/271 (69%)
Query: 448 EKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPK 507
E+ E YQG AVLG+A +AM E++G +M++R HL+ YG IRRAVPLA+GL+ SNP+
Sbjct: 721 EEEELYQGIAVLGLACIAMGEDIGQDMSLRHFGHLMHYGNSLIRRAVPLAMGLVSTSNPQ 780
Query: 508 VNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVR 567
+ V +TLSR SHD D EVA ++ S+GL+G+GTNNAR+A +LR L+SYY K + LF VR
Sbjct: 781 MKVFETLSRYSHDPDLEVAQNSIYSMGLVGAGTNNARLAQLLRQLASYYIKSPDTLFMVR 840
Query: 568 IAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKY-----HYVL 622
IAQG++H+GKG LTL PY+S+R +LS +LA ++T A LD ++ I+ H +L
Sbjct: 841 IAQGILHLGKGTLTLTPYNSERTILSKVSLASLLTIAIALLDPRSFILNDSTTETTHQLL 900
Query: 623 YFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGD 682
Y+L A++PRML+TVDE LKP+ PKTITG+ T STPVLL G+
Sbjct: 901 YYLTPAVKPRMLVTVDEELKPIKVNVRVGQAVDVVGQAGKPKTITGWVTQSTPVLLNYGE 960
Query: 683 RAELA-TEKYIPLSPILEGFVILKENPDYRE 712
RAEL T+++I LS LEG VILK+NP+Y E
Sbjct: 961 RAELENTDEWISLSSSLEGVVILKKNPEYME 991
>UNIPROTKB|F1P4P8 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 GeneTree:ENSGT00550000074983 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 EMBL:AADN02020694 IPI:IPI00592623
Ensembl:ENSGALT00000039840 ArrayExpress:F1P4P8 Uniprot:F1P4P8
Length = 733
Score = 969 (346.2 bits), Expect = 1.9e-123, Sum P(2) = 1.9e-123
Identities = 198/453 (43%), Positives = 285/453 (62%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQMDMLEKYIDDNAYSKVCLYLTSCVSYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A I+ KF +P AL++AL L++++ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGIFRKFNRYPEALRLALMLNDVELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELNEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLG ILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGTILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+RIGAI GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRIGAIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMISVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL E K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKETYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDICAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 265 (98.3 bits), Expect = 1.9e-123, Sum P(2) = 1.9e-123
Identities = 50/88 (56%), Positives = 71/88 (80%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVM 511
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNIL 707
Query: 512 DTLSRLSHDTDSEVAMAAVISLGLIGSG 539
DTLS+ HD D EV+ ++ +G++GSG
Sbjct: 708 DTLSKF-HDADPEVSYNSIF-VGMVGSG 733
>SGD|S000001069 [details] [associations]
symbol:RPN1 "Base subunit of the 19S regulatory particle of
the 26S proteasome" species:4932 "Saccharomyces cerevisiae"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0030674
"protein binding, bridging" evidence=IPI] [GO:0004175
"endopeptidase activity" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 SGD:S000001069
INTERPRO:IPR002015 GO:GO:0005783 GO:GO:0005634 GO:GO:0030234
SUPFAM:SSF48371 EMBL:BK006934 GO:GO:0050790 GO:GO:0006511
GO:GO:0042176 EMBL:U10399 GO:GO:0034515 GO:GO:0008540 Pfam:PF01851
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1 OrthoDB:EOG4P8JSC
PIR:S46779 RefSeq:NP_011892.1 ProteinModelPortal:P38764
DIP:DIP-2876N IntAct:P38764 MINT:MINT-707867 STRING:P38764
PaxDb:P38764 PeptideAtlas:P38764 EnsemblFungi:YHR027C GeneID:856422
KEGG:sce:YHR027C NextBio:981994 Genevestigator:P38764
GermOnline:YHR027C Uniprot:P38764
Length = 993
Score = 586 (211.3 bits), Expect = 4.5e-110, Sum P(2) = 4.5e-110
Identities = 112/257 (43%), Positives = 175/257 (68%)
Query: 457 AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 516
AVLGIA++A+ E++G EM++R HL+ YG ++IRR VPLA+G++ +S+P++ V DTL+R
Sbjct: 739 AVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTR 798
Query: 517 LSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMG 576
SHD D EV+M ++ ++GL G+GTNNAR+A +LR L+SYY ++ + LF R+AQGL+H+G
Sbjct: 799 FSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFITRLAQGLLHLG 858
Query: 577 KGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLT 636
KG +T++ ++ D +L+ LA I+TT + ++ K+H + Y L ++P+ +L
Sbjct: 859 KGTMTMDVFN-DAHVLNKVTLASILTTAVGLVSPSFML--KHHQLFYMLNAGIRPKFILA 915
Query: 637 VDENLKPLSXXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSP 696
+++ +P+ PK ITG+ T STPVLL G+RAEL T++YI +
Sbjct: 916 LNDEGEPIKVNVRVGQAVETVGQAGRPKKITGWITQSTPVLLNHGERAELETDEYISYTS 975
Query: 697 ILEGFVILKENPDYRED 713
+EG VILK+NPDYRE+
Sbjct: 976 HIEGVVILKKNPDYREE 992
Score = 536 (193.7 bits), Expect = 4.5e-110, Sum P(2) = 4.5e-110
Identities = 119/317 (37%), Positives = 186/317 (58%)
Query: 137 LQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRAS-AGASVDSARQNLAATF 195
+QDI+ N KLSE +L LA+++ + PK PEDIYK+HL + ++ + A +DSA+QNLA++F
Sbjct: 326 VQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVFSSAGLDSAQQNLASSF 385
Query: 196 VNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQ 255
VN F+N G+ DKL+ V +D NW++K K G SA AS+G I W++D GL Q
Sbjct: 386 VNGFLNLGYCNDKLI-VDND--------NWVYKTKGDGMTSAVASIGSIYQWNLD-GLQQ 435
Query: 256 IDKYFHSTDNHVIAGALLGVGIVNCGIRN-DCDPALALLSEYVGREDACIRIGAIMGLGI 314
+DKY + + V AGALLG+GI G+ + + +PAL LL +YV D I AI+GLGI
Sbjct: 436 LDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDYVTNPDTKISSAAILGLGI 495
Query: 315 SYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSE 374
++AG++ND++ L I P++ A ++++L ++VG+CN ++ +I+ ++R+
Sbjct: 496 AFAGSKNDEVLGLLLPIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTA 555
Query: 375 SELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVL 434
EL + E V+ E + ++ + SCAY GTG+VL
Sbjct: 556 IELKTDWVRFLALALGILYMGQGEQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVL 615
Query: 435 KVQNLLGHCAQHHEKGE 451
+Q+LL + KGE
Sbjct: 616 LIQDLLHRLTPKNVKGE 632
Score = 316 (116.3 bits), Expect = 7.4e-87, Sum P(2) = 7.4e-87
Identities = 74/216 (34%), Positives = 113/216 (52%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ L +IV + +KHN E F+R C Y+ + LP P+
Sbjct: 201 LRLCLDIVPYFLKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPE 260
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
D+ L AY IYL E +A+ +A+ L ++ +F + D + KQ YILA +
Sbjct: 261 DVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTS 320
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRAS- 179
E +QDI+ N KLSE +L LA+++ + PK PEDIYK+HL + ++
Sbjct: 321 FEYE-----------GVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVF 369
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSD 215
+ A +DSA+QNLA++FVN F+N G+ DKL+ V +D
Sbjct: 370 SSAGLDSAQQNLASSFVNGFLNLGYCNDKLI-VDND 404
Score = 78 (32.5 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 457 AVLGIAMVAMAEELG-LEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLS 515
A+LGI + A G +E A+ L+ + + I A L LG+ + V+ L
Sbjct: 451 ALLGIGISASGVHDGEVEPALLLLQDYVTNPDTKISSAAILGLGIAFAGSKNDEVLGLLL 510
Query: 516 RLSHDTDSEVAMAAVISLGL--IGSGTNNARIA-GMLRNL---SSYYYKDANLLFCVRIA 569
++ TD + AA+ SL L + GT N I ++ N ++ K + F + +A
Sbjct: 511 PIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRF-LALA 569
Query: 570 QGLVHMGKG 578
G+++MG+G
Sbjct: 570 LGILYMGQG 578
Score = 75 (31.5 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 215 DASSGGSSGNWLFKNKEHGKMS--AAASLGMILLW---DV--DSGLAQIDKYFHSTDNHV 267
DA++ G + + + KE G + A A LG+ L+ D+ + L H + H+
Sbjct: 714 DATTDGKNDDEE-EEKEAGIVDELAYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHI 772
Query: 268 IAGALLGVGIVNCGIRNDCDPALAL---LSEYVGREDACIRIGAIMGLGISYAGTQNDQI 324
L +GIV+ DP + + L+ + D + + +I +G+ AGT N ++
Sbjct: 773 RRMVPLAMGIVSVS-----DPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARL 827
Query: 325 RHKLSTILNDAKSPLDVIAFSAISLGLIYVG 355
L + + D + + ++ GL+++G
Sbjct: 828 AQLLRQLASYYSREQDALFITRLAQGLLHLG 858
Score = 65 (27.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 19/92 (20%), Positives = 42/92 (45%)
Query: 461 IAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH- 519
+A + + L+ ++ L+ L E ++ L +G+ V L L
Sbjct: 419 VASIGSIYQWNLD-GLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDY 477
Query: 520 --DTDSEVAMAAVISLGLIGSGTNNARIAGML 549
+ D++++ AA++ LG+ +G+ N + G+L
Sbjct: 478 VTNPDTKISSAAILGLGIAFAGSKNDEVLGLL 509
Score = 51 (23.0 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 268 IAGALLGVGIVNCGIRNDCDPALAL-----LSEYVGREDACIRIGAIMGLGISYAGTQND 322
+A A+LG+ ++ G D ++L L Y G E + MG+ +S + Q
Sbjct: 736 LAYAVLGIALIALG--EDIGKEMSLRHFGHLMHY-GNEHIRRMVPLAMGI-VSVSDPQM- 790
Query: 323 QIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAI 365
++ L+ +DA L+V S ++GL G+ N +AQ +
Sbjct: 791 KVFDTLTRFSHDAD--LEVSMNSIFAMGLCGAGTNNARLAQLL 831
>UNIPROTKB|E1BX02 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 Pfam:PF01851
GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02020694 IPI:IPI00821592 Ensembl:ENSGALT00000010167
ArrayExpress:E1BX02 Uniprot:E1BX02
Length = 685
Score = 969 (346.2 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 198/453 (43%), Positives = 285/453 (62%)
Query: 1 MELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPD 60
+ LV+EIV ++M HNAE + + CLYLTS Y+P P+
Sbjct: 185 LTLVKEIVPYNMAHNAEHEACDLLMEIEQMDMLEKYIDDNAYSKVCLYLTSCVSYVPEPE 244
Query: 61 DMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
+ +L A I+ KF +P AL++AL L++++ V+ IFTSC D++ +KQ ++L RHG+
Sbjct: 245 NSALLRCALGIFRKFNRYPEALRLALMLNDVELVEDIFTSCKDVVVQKQMAFMLGRHGVF 304
Query: 121 LELXXXXXXXXXXRYALQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGR-AS 179
LEL L +I++NV+L+ +L LAR++++MEPK P+DIYK HL + R
Sbjct: 305 LELNEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 180 AGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGN-WLFKNKEHGKMSAA 238
+G+ VDSAR NLA++FVN FVNA FGQDKL+T GN WL+KNK+HG +SAA
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLT---------DDGNKWLYKNKDHGMLSAA 411
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
ASLG ILLWDVD GL QIDKY +S+++++ +GALL GIVN G+RN+CDPALALLS+YV
Sbjct: 412 ASLGTILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVL 471
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
+RIGAI GLG++YAG+ + + L ++ D+KS ++V +A++ G+I VGSCN
Sbjct: 472 HNSNTMRIGAIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMISVGSCN 531
Query: 359 EEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYC 418
+V I+ +M++SE+EL E K E++EA + +E R +
Sbjct: 532 GDVTSTILQTIMEKSETELKETYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFA 591
Query: 419 DMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE 451
+ + CAYAG+GNVLKVQ LL C++H + E
Sbjct: 592 NTLVDICAYAGSGNVLKVQQLLHICSEHFDSKE 624
Score = 127 (49.8 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 452 AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGE 487
A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE
Sbjct: 648 AHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGE 683
>GENEDB_PFALCIPARUM|PFB0260w [details] [associations]
symbol:PFB0260w "proteasome 26S regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0006511 GO:GO:0042176 EMBL:AE001362
GO:GO:0005838 HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_001349569.2 IntAct:O96153 MINT:MINT-1742855 PRIDE:O96153
EnsemblProtists:PFB0260w:mRNA GeneID:812651 KEGG:pfa:PFB0260w
EuPathDB:PlasmoDB:PF3D7_0205900 ProtClustDB:CLSZ2514754
Uniprot:O96153
Length = 966
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 153/401 (38%), Positives = 239/401 (59%)
Query: 310 MGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFAL 369
+ LG+ + ++ ++ LS L K P+ + + G+ + GS + Q ++ L
Sbjct: 571 VALGLLFLCSR-EKCEATLSA-LEIIKHPISKYMIATVE-GMAFAGSNDVLKVQKMLQVL 627
Query: 370 MDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAG 429
+++ G+ +S + A+++KT K D + + +
Sbjct: 628 VEKR----GDKKNNSDNKTTTANNTDNNKS--SNADINKTTTTDTSKKTDNNNNNSS-SN 680
Query: 430 TGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQN 489
N K ++++ + Q A+L IA++A+ +++ +M R ++H LQY N
Sbjct: 681 NKNT-KSNEEKSSSSKNYVEDNLDQCVAILNIALIALTDDISSDMTTRIIDHFLQYSNVN 739
Query: 490 IRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGML 549
++AVPLAL LL S PK N++D LS+L+HD D +VA+ A+ISLG +G+GTNN+RIA +L
Sbjct: 740 QKKAVPLALALLFTSFPKPNIVDILSKLTHDQDPDVALHAIISLGFVGAGTNNSRIAILL 799
Query: 550 RNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLD 609
R LS++Y KD N +F VR+AQGL++MGKGLLT+NP HS+R +++ +L ++ T+ ACL
Sbjct: 800 RQLSAFYCKDTNAIFVVRLAQGLLYMGKGLLTINPLHSNRSIINYVSLGSLLITIHACLQ 859
Query: 610 MKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGF 669
+K+ I+GKYHY+LY LV + PRML+TV+E L+ L PKTITGF
Sbjct: 860 LKSTILGKYHYLLYHLVPCIYPRMLVTVNEKLESLPVSVRVGQAVDIVGQAGKPKTITGF 919
Query: 670 QTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDY 710
QTH TPVLL+ DRAE+ATE+YI ++ LEG VILK++P+Y
Sbjct: 920 QTHVTPVLLSHTDRAEMATEEYISVNDTLEGIVILKKDPNY 960
Score = 666 (239.5 bits), Expect = 3.7e-65, P = 3.7e-65
Identities = 154/444 (34%), Positives = 242/444 (54%)
Query: 2 ELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDD 61
++V +V + HN E + R+ LYL + Y D+
Sbjct: 191 DIVNIVVPYCFAHNTEYEAIDLLIEVDKINDIYLYVDEKSCDRSILYLLNLTHYSSSTDE 250
Query: 62 ML-VLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
++D+ I K + L+I L L+ + +K + C+D+L KQ I +RH +
Sbjct: 251 YYKLMDVILNILKKHNKHVECLKILLRLNKIDKIKDLIFECNDILICKQIALICSRHCVH 310
Query: 121 LELXXXXXXXXXXRYA--LQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRA 178
++ + + + LS +L LA+D++V EPK PED+YK+HL + R
Sbjct: 311 IQFTEEEIKKYTHLNLNEISTLTSGEHLSPIFLKLAKDLDVEEPKLPEDVYKSHLEEKRN 370
Query: 179 SAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAA 238
+ DSA+QNL++TFVNAFVNA F +DKLMTV +S W+FKNK++G MSA
Sbjct: 371 TT--VWDSAKQNLSSTFVNAFVNAAFCKDKLMTV--------NSSLWIFKNKDYGLMSAT 420
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
AS+G++L+W++D GL+QIDK+ +S+D +V AGAL+ G+ I+N+CDPA ALLSE++
Sbjct: 421 ASMGLLLMWNLDEGLSQIDKFQYSSDQYVKAGALMAFGLACTNIKNECDPAYALLSEHID 480
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
E+A ++GAI+G G +YAGT + + L L D ++ ++A+SLGL++VGS N
Sbjct: 481 AENALEKMGAILGFGYAYAGTNRENLLDILIPPLVDNGCIIECSVYAALSLGLVFVGSQN 540
Query: 359 EEVAQAIIFALMDRSE--SELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRK 416
E+A+ II ++++ + + L P +E EAT + I K
Sbjct: 541 REIAEYIIDTVLEKEKINNSLDTPIAKLYAVALGLLFLCSREKCEATLSALEIIKHPISK 600
Query: 417 YCDMTLLSCAYAGTGNVLKVQNLL 440
Y T+ A+AG+ +VLKVQ +L
Sbjct: 601 YMIATVEGMAFAGSNDVLKVQKML 624
>UNIPROTKB|O96153 [details] [associations]
symbol:PFB0260w "Proteasome 26S regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0006511 GO:GO:0042176 EMBL:AE001362
GO:GO:0005838 HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_001349569.2 IntAct:O96153 MINT:MINT-1742855 PRIDE:O96153
EnsemblProtists:PFB0260w:mRNA GeneID:812651 KEGG:pfa:PFB0260w
EuPathDB:PlasmoDB:PF3D7_0205900 ProtClustDB:CLSZ2514754
Uniprot:O96153
Length = 966
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 153/401 (38%), Positives = 239/401 (59%)
Query: 310 MGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFAL 369
+ LG+ + ++ ++ LS L K P+ + + G+ + GS + Q ++ L
Sbjct: 571 VALGLLFLCSR-EKCEATLSA-LEIIKHPISKYMIATVE-GMAFAGSNDVLKVQKMLQVL 627
Query: 370 MDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAG 429
+++ G+ +S + A+++KT K D + + +
Sbjct: 628 VEKR----GDKKNNSDNKTTTANNTDNNKS--SNADINKTTTTDTSKKTDNNNNNSS-SN 680
Query: 430 TGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQN 489
N K ++++ + Q A+L IA++A+ +++ +M R ++H LQY N
Sbjct: 681 NKNT-KSNEEKSSSSKNYVEDNLDQCVAILNIALIALTDDISSDMTTRIIDHFLQYSNVN 739
Query: 490 IRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGML 549
++AVPLAL LL S PK N++D LS+L+HD D +VA+ A+ISLG +G+GTNN+RIA +L
Sbjct: 740 QKKAVPLALALLFTSFPKPNIVDILSKLTHDQDPDVALHAIISLGFVGAGTNNSRIAILL 799
Query: 550 RNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLD 609
R LS++Y KD N +F VR+AQGL++MGKGLLT+NP HS+R +++ +L ++ T+ ACL
Sbjct: 800 RQLSAFYCKDTNAIFVVRLAQGLLYMGKGLLTINPLHSNRSIINYVSLGSLLITIHACLQ 859
Query: 610 MKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTITGF 669
+K+ I+GKYHY+LY LV + PRML+TV+E L+ L PKTITGF
Sbjct: 860 LKSTILGKYHYLLYHLVPCIYPRMLVTVNEKLESLPVSVRVGQAVDIVGQAGKPKTITGF 919
Query: 670 QTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDY 710
QTH TPVLL+ DRAE+ATE+YI ++ LEG VILK++P+Y
Sbjct: 920 QTHVTPVLLSHTDRAEMATEEYISVNDTLEGIVILKKDPNY 960
Score = 666 (239.5 bits), Expect = 3.7e-65, P = 3.7e-65
Identities = 154/444 (34%), Positives = 242/444 (54%)
Query: 2 ELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDD 61
++V +V + HN E + R+ LYL + Y D+
Sbjct: 191 DIVNIVVPYCFAHNTEYEAIDLLIEVDKINDIYLYVDEKSCDRSILYLLNLTHYSSSTDE 250
Query: 62 ML-VLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCYILARHGIT 120
++D+ I K + L+I L L+ + +K + C+D+L KQ I +RH +
Sbjct: 251 YYKLMDVILNILKKHNKHVECLKILLRLNKIDKIKDLIFECNDILICKQIALICSRHCVH 310
Query: 121 LELXXXXXXXXXXRYA--LQDIVNNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRA 178
++ + + + LS +L LA+D++V EPK PED+YK+HL + R
Sbjct: 311 IQFTEEEIKKYTHLNLNEISTLTSGEHLSPIFLKLAKDLDVEEPKLPEDVYKSHLEEKRN 370
Query: 179 SAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAA 238
+ DSA+QNL++TFVNAFVNA F +DKLMTV +S W+FKNK++G MSA
Sbjct: 371 TT--VWDSAKQNLSSTFVNAFVNAAFCKDKLMTV--------NSSLWIFKNKDYGLMSAT 420
Query: 239 ASLGMILLWDVDSGLAQIDKYFHSTDNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVG 298
AS+G++L+W++D GL+QIDK+ +S+D +V AGAL+ G+ I+N+CDPA ALLSE++
Sbjct: 421 ASMGLLLMWNLDEGLSQIDKFQYSSDQYVKAGALMAFGLACTNIKNECDPAYALLSEHID 480
Query: 299 REDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCN 358
E+A ++GAI+G G +YAGT + + L L D ++ ++A+SLGL++VGS N
Sbjct: 481 AENALEKMGAILGFGYAYAGTNRENLLDILIPPLVDNGCIIECSVYAALSLGLVFVGSQN 540
Query: 359 EEVAQAIIFALMDRSE--SELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRK 416
E+A+ II ++++ + + L P +E EAT + I K
Sbjct: 541 REIAEYIIDTVLEKEKINNSLDTPIAKLYAVALGLLFLCSREKCEATLSALEIIKHPISK 600
Query: 417 YCDMTLLSCAYAGTGNVLKVQNLL 440
Y T+ A+AG+ +VLKVQ +L
Sbjct: 601 YMIATVEGMAFAGSNDVLKVQKML 624
>UNIPROTKB|H9KZ05 [details] [associations]
symbol:Gga.48069 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02048751 Ensembl:ENSGALT00000002178 Uniprot:H9KZ05
Length = 165
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 98/163 (60%), Positives = 123/163 (75%)
Query: 548 MLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFAC 607
MLR L+ Y+ KD N LF VR+AQGL H+GKG LTL PYHSDR L+S A+AG++T L +
Sbjct: 1 MLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSF 60
Query: 608 LDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLKPLSXXXXXXXXXXXXXXXXXPKTIT 667
LD++ +I+GK HYVLY LV AMQPRML+T DE L+PL PKTIT
Sbjct: 61 LDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTIT 120
Query: 668 GFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDY 710
GFQTH+TPVLLA G+RAELATE+++P++PILEGFVIL++NP+Y
Sbjct: 121 GFQTHTTPVLLAHGERAELATEEHVPVTPILEGFVILRKNPNY 163
>UNIPROTKB|H7C1H2 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:AC078797
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2
ProteinModelPortal:H7C1H2 Ensembl:ENST00000432855 Uniprot:H7C1H2
Length = 203
Score = 400 (145.9 bits), Expect = 9.9e-37, P = 9.9e-37
Identities = 85/206 (41%), Positives = 124/206 (60%)
Query: 369 LMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYA 428
+M++SE+EL + K E++EA + +E R + + + CAYA
Sbjct: 3 IMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYA 62
Query: 429 GTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQ 488
G+GNVLKVQ LL C++H + E + +E +M H L+YGE
Sbjct: 63 GSGNVLKVQQLLHICSEHFDSKEKEEDKDKKE-KKDKDKKEAPADMGA----HQLRYGEP 117
Query: 489 NIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGM 548
+RRAVPLAL L+ +SNP++N++DTLS+ SHD D EV+ ++ ++G++GSGTNNAR+A M
Sbjct: 118 TLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAM 177
Query: 549 LRNLSSYYYKDANLLFCVRIAQGLVH 574
LR L+ Y+ KD N LF VR+AQGL H
Sbjct: 178 LRQLAQYHAKDPNNLFMVRLAQGLTH 203
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 229 (85.7 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 114/488 (23%), Positives = 207/488 (42%)
Query: 172 HLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKE 231
+LLDGR+S S A TF NAF++AG D + G + NW
Sbjct: 319 NLLDGRSSIFHS--------AVTFANAFMHAGTTDDSFFR--KNLEWLGRATNW------ 362
Query: 232 HGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVI--AGALLGVGIVNCGIRNDCDPA 289
K SA A+LG+I ++ G + Y + G+L +G++ G +
Sbjct: 363 -SKFSATAALGVIHKGNLSQGRTILKPYLPGSSGSANNKGGSLFALGLIFAGHGREVIGT 421
Query: 290 L-ALLSEY---VGREDACIRI-GAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAF 344
L + + + G D I++ GA +G G++ G++++ + L +L + S + A
Sbjct: 422 LKSFIDDNGNAAGSNDIDIQLHGAALGAGVAGMGSKSESLYESLKVVLY-SDSAISSQA- 479
Query: 345 SAISLGLIYVGSCNEE-VAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEAT 403
+A+ +GL+ +GS NEE + + +AL + E+ + ++E +
Sbjct: 480 AALGMGLVMLGSGNEEAIKDMLTYALETQHENII-----RGLAIGIALLSYGREEKADEI 534
Query: 404 AEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAM 463
+ I +Y ++ AYAGTGN ++ LL H A + + +VL +
Sbjct: 535 IDQLMNQESSILRYGGAFTIALAYAGTGNNNAIKKLL-HFAVSDPSDDVRRA-SVLSLGF 592
Query: 464 VAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDS 523
+ + + ++ L Q ++R LALG+ C ++ L L+ D
Sbjct: 593 LLIRDYTAAPQIVKLLS---QSHNPHVRYGTALALGISCAGRAYPAAIEVLEPLTKDAVD 649
Query: 524 EVAMAAVISLGLIGSGTNNARIAGMLRNLSSYY-------YKDANLLFCVRIAQGLVHMG 576
V A+++ +I N I ++ + Y ++DA F +AQG++ G
Sbjct: 650 FVRQGALMASSMILIQQNEF-IYPKVKEFTKQYADTIKNKHEDALAKFGATLAQGIIDAG 708
Query: 577 KGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVL-YFLVLAMQPRMLL 635
T+N +S L+ A+ G+ TLF + Y + L +FL L+ P ++
Sbjct: 709 GRNSTINLENSQTNTLNTKAIVGL--TLF--------VQSWYWFPLAHFLSLSFAPTSII 758
Query: 636 TV-DENLK 642
V ++LK
Sbjct: 759 GVRGQDLK 766
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 219 (82.2 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 100/450 (22%), Positives = 191/450 (42%)
Query: 167 DIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWL 226
D Y LL+ + ++ ++ +L F + +D S ++ WL
Sbjct: 297 DYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTDNSFIKANLPWL 356
Query: 227 FKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF---HSTDNHVIAGALLGVGIVNCGIR 283
K + K +A ASLG+I ++ G + Y ++ + G+L G+G++ G
Sbjct: 357 GKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFG 416
Query: 284 NDCDPALALL----SEYVGREDACIRI-GAIMGLGISYAGTQNDQIRHKLSTIL-NDAKS 337
D L + S G ED + + GA +G+G++ G+ N ++ L +L ND+ +
Sbjct: 417 RDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSAT 476
Query: 338 PLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 397
+ +A+ +GL +G+ E AI E++ G +Q
Sbjct: 477 SGEA---AALGMGLCMLGTGKPE---AIHDMFTYSQETQHGN-ITRGLAVGLALINYGRQ 529
Query: 398 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPA 457
E + +E + +Y ++ AYAGTGN V+ LL H A + + A
Sbjct: 530 ELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLL-HVAVSDSNDDVRRA-A 587
Query: 458 VLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 517
V+ + V + + + R ++ L + ++R ALG+ C + +D L L
Sbjct: 588 VIALGFVLLRDYTTVP---RIVQLLSKSHNAHVRCGTAFALGIACAGKGLQSAIDVLDPL 644
Query: 518 SHDTDSEVAMAAVISLGLI---GSGTNNARIAGMLRNLSSYY---YKDANLLFCVRIAQG 571
+ D V AA+I+L +I + N ++A + +N S +++ F +AQG
Sbjct: 645 TKDPVDFVRQAAMIALSMILIQQTEKLNPQVADINKNFLSVITNKHQEGLAKFGACVAQG 704
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIV 601
+++ G +T+ ++D L ++ G+V
Sbjct: 705 IMNAGGRNVTIQLENADTGTLDTKSVVGLV 734
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 202 (76.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 99/436 (22%), Positives = 192/436 (44%)
Query: 224 NWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD-----NHVIAGALLGVGIV 278
+WL K K +A A+LG+I + + + Y D + GA +G++
Sbjct: 373 SWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAFYAMGLI 432
Query: 279 NCGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQNDQIRHKLSTIL-NDAK 336
+ N L E + ED ++ G ++G+G++ ++++ + + TIL ND
Sbjct: 433 HA---NHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFND-- 487
Query: 337 SPLDVIAFSA--ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXX 394
+ +A SA IS+GLI +G+ + + AI L E++ +
Sbjct: 488 ---NAVAGSAAGISMGLIMLGTAS---SAAIDEMLQYAHETQHEKIIRGLGIGIALIVYG 541
Query: 395 XKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQ 454
+QE+ E++ + +R Y M + AY GT N V+++L H + + +
Sbjct: 542 RQQEADGIIKELNNDLDPTLR-YAGMFATALAYCGTSNSKIVRDVL-HISVSDVNDDVRR 599
Query: 455 GPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTL 514
AV + + + L I ++E L+ ++R +ALG+ C ++ +D L
Sbjct: 600 A-AVCALGFICFKDPNAL---ISTVELLVDSYNPHVRYGSAIALGIACANSGSNAALDLL 655
Query: 515 SRLSHDTDSEVAMAAVISLGLIGSGTN---NARIAGMLRNLSSYY---YKDANLLFCVRI 568
SRL D V A+I+ +I + N N++++G+ ++ ++DA +
Sbjct: 656 SRLVEDATDFVRQGAMIAQAMILTQHNDQLNSKVSGIRKHFEQVINEKHEDALAKLGATL 715
Query: 569 AQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHY---VLYFL 625
AQG++ G +T+ + L +A+ G+ T+F +Y Y + +F+
Sbjct: 716 AQGIIDAGGRNVTI-ALQTATGSLKLSAIVGL--TVFL----------QYWYWFPLTHFM 762
Query: 626 VLAMQPRMLLTVDENL 641
L+ P L+ +D+NL
Sbjct: 763 SLSFSPTALIGLDKNL 778
Score = 155 (59.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 98/456 (21%), Positives = 190/456 (41%)
Query: 144 VKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAG 203
+++ G T+ D E + + D+ +L+ + + +S N A TF NAF+N G
Sbjct: 306 IRILSGEQTVKYDREFLYAHNNTDML---ILNRTKDSLEARNSVFHN-AVTFANAFMNFG 361
Query: 204 FGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHST 263
D D S WL K K +A A+LG+I + + + Y
Sbjct: 362 TSSDSFFR---DNLS------WLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEE 412
Query: 264 D-----NHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYA 317
D + GA +G+++ N L E + ED ++ G ++G+G++
Sbjct: 413 DAPSSSTYSEGGAFYAMGLIHA---NHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGM 469
Query: 318 GTQNDQIRHKLSTIL-NDAKSPLDVIAFSA--ISLGLIYVGSCNEEVAQAIIFALMDRSE 374
++++ + + TIL ND + +A SA IS+GLI +G+ + + AI L E
Sbjct: 470 ASRDETLYESVKTILFND-----NAVAGSAAGISMGLIMLGTAS---SAAIDEMLQYAHE 521
Query: 375 SELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVL 434
++ + +QE+ E++ + +R Y M + AY GT N
Sbjct: 522 TQHEKIIRGLGIGIALIVYGRQQEADGIIKELNNDLDPTLR-YAGMFATALAYCGTSNSK 580
Query: 435 KVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGL----EMAIRSLEHLLQYGEQNI 490
V+++L H + + + AV + + + L E+ + S ++YG
Sbjct: 581 IVRDVL-HISVSDVNDDVRRA-AVCALGFICFKDPNALISTVELLVDSYNPHVRYGS--- 635
Query: 491 RRAVPLALGLLCI-SNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGML 549
A+ L + SN ++++ L + D + AM A + + N++++G+
Sbjct: 636 --AIALGIACANSGSNAALDLLSRLVEDATDFVRQGAMIAQAMILTQHNDQLNSKVSGIR 693
Query: 550 RNLSSYY---YKDANLLFCVRIAQGLVHMGKGLLTL 582
++ ++DA +AQG++ G +T+
Sbjct: 694 KHFEQVINEKHEDALAKLGATLAQGIIDAGGRNVTI 729
>WB|WBGene00004459 [details] [associations]
symbol:rpn-2 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938 GO:GO:0008340
GO:GO:0009792 GO:GO:0006915 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0031965
GO:GO:0000003 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2 RefSeq:NP_498347.3
ProteinModelPortal:Q18115 SMR:Q18115 IntAct:Q18115 MINT:MINT-210658
STRING:Q18115 PaxDb:Q18115 PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1
EnsemblMetazoa:C23G10.4b.2 EnsemblMetazoa:C23G10.4b.3 GeneID:175877
KEGG:cel:CELE_C23G10.4 UCSC:C23G10.4a.1 CTD:175877
WormBase:C23G10.4a WormBase:C23G10.4b eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 InParanoid:Q18115
KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851 Uniprot:Q18115
Length = 965
Score = 200 (75.5 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 97/432 (22%), Positives = 183/432 (42%)
Query: 224 NWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF--HSTDNHVI--AGALLGVGIVN 279
NW+ K K +A ASLG+I S + ++ Y S + GA+L G+++
Sbjct: 368 NWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESVEGFGFKEGGAMLAYGLIH 427
Query: 280 CGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSP 338
D A++ L++++ E+ +R GA +G G++ G+ + K+ +L ++
Sbjct: 428 AK-HGDAT-AMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSVSNYEKVREVLQRDEA- 484
Query: 339 LDVIAFSA-ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 397
V SA I++GLI G N+EV + +D + +
Sbjct: 485 --VSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQGDAE 542
Query: 398 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPA 457
++ + N +R + +LS AYAGTG+ V+ LL A + + A
Sbjct: 543 PYIKEA--IGAKSNPMLRS-TGICMLSMAYAGTGSPDVVRRLLEKVAT--DPNLDVKRYA 597
Query: 458 VLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 517
+GI V + + + L ++ ++R +ALG+ C + + + +
Sbjct: 598 TIGIGFVLSKDP---STCLSYVAMLTEHFNGHVRYGAAMALGIACAGTGNMEAIALIEPM 654
Query: 518 SHDTDSEVAMAAVISLGLIGSGTNN---ARIAGMLRNLSSYY---YKDANLLFCVRIAQG 571
D + V A++SL LI + ++ G + L +D+ + F IAQG
Sbjct: 655 ISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNEDSLVKFGAIIAQG 714
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKY-HYVLYFLVLAMQ 630
L+ +G + +SD+ P + + + M + G + H + +F+ LA +
Sbjct: 715 LLDIGGQNAAVTMQNSDK---QPD--------MGSMVGMMCFLHGWFWHSMHFFIALAAK 763
Query: 631 PRMLLTVDENLK 642
P L+ ++ENLK
Sbjct: 764 PSCLVMMNENLK 775
Score = 40 (19.1 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 85 ALFLDN--MQYVKQIFTSCDDLLR 106
AL + N MQY T+CDD LR
Sbjct: 345 ALLISNGLMQYG----TTCDDFLR 364
Score = 40 (19.1 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 691 YIPLSPILEGFVILKENPDY-RED 713
Y P+ P+ +G +I+ + D RE+
Sbjct: 908 YSPMKPLYKGGIIVADRVDKEREE 931
>UNIPROTKB|Q18115 [details] [associations]
symbol:rpn-2 "26S proteasome non-ATPase regulatory subunit
1" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome
complex" evidence=NAS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006915 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0031965 GO:GO:0000003 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2
RefSeq:NP_498347.3 ProteinModelPortal:Q18115 SMR:Q18115
IntAct:Q18115 MINT:MINT-210658 STRING:Q18115 PaxDb:Q18115
PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1 EnsemblMetazoa:C23G10.4b.2
EnsemblMetazoa:C23G10.4b.3 GeneID:175877 KEGG:cel:CELE_C23G10.4
UCSC:C23G10.4a.1 CTD:175877 WormBase:C23G10.4a WormBase:C23G10.4b
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
InParanoid:Q18115 KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851
Uniprot:Q18115
Length = 965
Score = 200 (75.5 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 97/432 (22%), Positives = 183/432 (42%)
Query: 224 NWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF--HSTDNHVI--AGALLGVGIVN 279
NW+ K K +A ASLG+I S + ++ Y S + GA+L G+++
Sbjct: 368 NWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESVEGFGFKEGGAMLAYGLIH 427
Query: 280 CGIRNDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSP 338
D A++ L++++ E+ +R GA +G G++ G+ + K+ +L ++
Sbjct: 428 AK-HGDAT-AMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSVSNYEKVREVLQRDEA- 484
Query: 339 LDVIAFSA-ISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQ 397
V SA I++GLI G N+EV + +D + +
Sbjct: 485 --VSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQGDAE 542
Query: 398 ESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPA 457
++ + N +R + +LS AYAGTG+ V+ LL A + + A
Sbjct: 543 PYIKEA--IGAKSNPMLRS-TGICMLSMAYAGTGSPDVVRRLLEKVAT--DPNLDVKRYA 597
Query: 458 VLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 517
+GI V + + + L ++ ++R +ALG+ C + + + +
Sbjct: 598 TIGIGFVLSKDP---STCLSYVAMLTEHFNGHVRYGAAMALGIACAGTGNMEAIALIEPM 654
Query: 518 SHDTDSEVAMAAVISLGLIGSGTNN---ARIAGMLRNLSSYY---YKDANLLFCVRIAQG 571
D + V A++SL LI + ++ G + L +D+ + F IAQG
Sbjct: 655 ISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNEDSLVKFGAIIAQG 714
Query: 572 LVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKY-HYVLYFLVLAMQ 630
L+ +G + +SD+ P + + + M + G + H + +F+ LA +
Sbjct: 715 LLDIGGQNAAVTMQNSDK---QPD--------MGSMVGMMCFLHGWFWHSMHFFIALAAK 763
Query: 631 PRMLLTVDENLK 642
P L+ ++ENLK
Sbjct: 764 PSCLVMMNENLK 775
Score = 40 (19.1 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 85 ALFLDN--MQYVKQIFTSCDDLLR 106
AL + N MQY T+CDD LR
Sbjct: 345 ALLISNGLMQYG----TTCDDFLR 364
Score = 40 (19.1 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 691 YIPLSPILEGFVILKENPDY-RED 713
Y P+ P+ +G +I+ + D RE+
Sbjct: 908 YSPMKPLYKGGIIVADRVDKEREE 931
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 185 (70.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 99/464 (21%), Positives = 189/464 (40%)
Query: 192 AATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDS 251
A + NA ++AG D + D WL + K SA A LG+I +
Sbjct: 377 ATIYANAIMHAGTTVDTFLRENLD---------WLSRATNWAKFSATAGLGVIHRGHLQQ 427
Query: 252 GLAQIDKYFHST------DNHVIAGALLGVGIVNCGIRNDCDPALALLSEYVGREDA-CI 304
G + + Y + GAL +G+++ N + L + + + I
Sbjct: 428 GRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHA---NHGEGIKQFLRDSLRSTNVEVI 484
Query: 305 RIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQA 364
+ GA +GLG+S GT +++I + ++L + A IS+GL+ VG+ E+ ++
Sbjct: 485 QHGACLGLGLSALGTADEEIYDDVKSVLYTDSAVAGEAA--GISMGLLLVGTATEKASEM 542
Query: 365 IIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLS 424
+ +A E++ E ++E + E + I +Y M L+
Sbjct: 543 LAYA----HETQ-HEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALA 597
Query: 425 CAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQ 484
AY+GT N ++ LL H A + + + AVL + V ++ E R + L +
Sbjct: 598 LAYSGTANNKAIRQLL-HFAVS-DVSDDVRRTAVLALGFVLYSDP---EQTPRIVSLLSE 652
Query: 485 YGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIG---SGTN 541
++R LA+G+ C + L L+ D V A+I++ ++ S +
Sbjct: 653 SYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEAS 712
Query: 542 NARIAGMLRNLSSYY---YKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALA 598
++R+ R L ++D +A G++ G +T+ LLS T
Sbjct: 713 DSRVGVFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIR-------LLSKTKHD 765
Query: 599 GIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRMLLTVDENLK 642
+ + + + ++ ++YF+ LA P + ++ +LK
Sbjct: 766 KVTAVIGLAVFSQ---FWYWYPLIYFISLAFSPTAFIGLNYDLK 806
Score = 43 (20.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 686 LATEKYIPLSPILEGFVILKE 706
L +Y+P+ GFV+LK+
Sbjct: 931 LDDSRYVPVKLAPSGFVLLKD 951
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 185 (70.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 103/468 (22%), Positives = 191/468 (40%)
Query: 192 AATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDS 251
A + NA ++AG D + D WL + K SA A LG+I +
Sbjct: 377 ATIYANAIMHAGTTVDTFLRENLD---------WLSRATNWAKFSATAGLGVIHRGHLQQ 427
Query: 252 GLAQIDKYFHST------DNHVIAGALLGVGIVNC----GIRNDCDPALALLSEYVGRED 301
G + + Y + GAL +G+++ GI+ +L S V
Sbjct: 428 GRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTSVEV---- 483
Query: 302 ACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEV 361
I+ GA +GLG++ GT ++ I + ++L + A IS+GL+ VG+ ++
Sbjct: 484 --IQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAA--GISMGLLLVGTATDKA 539
Query: 362 AQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMT 421
++ + +A E++ E ++E + E + I +Y M
Sbjct: 540 SEMLAYA----HETQ-HEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMY 594
Query: 422 LLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEH 481
L+ AY+GT N ++ LL H A + + + AVL + V ++ E R +
Sbjct: 595 ALALAYSGTANNKAIRQLL-HFAVS-DVSDDVRRTAVLALGFVLYSDP---EQTPRIVSL 649
Query: 482 LLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIG---S 538
L + ++R LA+G+ C + L L+ D V A+I++ ++ S
Sbjct: 650 LSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQIS 709
Query: 539 GTNNARIAGMLRNLSSYY---YKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPT 595
+++R+ R L ++D +A G++ G +T+ + T
Sbjct: 710 EASDSRVGAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHD-KVT 768
Query: 596 ALAGIVTTLFACLDMKAVIVGKYHY-VLYFLVLAMQPRMLLTVDENLK 642
A+ G+ T+F+ Y Y ++YF+ LA P + ++ +LK
Sbjct: 769 AVIGL--TVFSQF--------WYWYPLIYFISLAFSPTAFIGLNYDLK 806
Score = 40 (19.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 690 KYIPLSPILEGFVILKE 706
+Y+P+ GFV+L++
Sbjct: 928 RYVPMKLAPSGFVLLRD 944
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 173 (66.0 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 112/517 (21%), Positives = 211/517 (40%)
Query: 142 NNVKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVN 201
N + + +G T+ ++E + S DI + L S+ + A T N F+
Sbjct: 418 NILDILDGIKTIQLNMEFLHRNSRVDIAILNKLRDTLEPRNSIFHS----AITISNGFMY 473
Query: 202 AGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYF- 260
AG QDK + WL K K +A A+LG+I ++ G + Y
Sbjct: 474 AGTAQDKFFR---------DNLEWLGKAVNWSKFTATAALGVIHRGNLSQGQRLLQPYLP 524
Query: 261 --HSTDNHVIAGALLGVG--IVNCGI--RNDCDPALALL-SEYVGREDACIRIGAIMGLG 313
+S D +G+L G + G+ N A+ + ++ + I+ G +GLG
Sbjct: 525 KENSIDGVGNSGSLYSQGGSLYALGLIYANHGGMAVDYIRDQFKKATEEVIQHGGALGLG 584
Query: 314 ISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRS 373
++ T ++ I L +L S L+ A +++GL+ +G+ N +V + +I D
Sbjct: 585 VAGMATGDEGIYDDLRNVLY-TDSALNGEAVG-LAMGLVMLGTGNMKVLEDMIQYAHDTQ 642
Query: 374 ESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNV 433
++ +QE+ + + +Y + ++ AY GT +
Sbjct: 643 HEKI----VRGLAMGMALIMYGRQEAADELINGLLGDPDPTLRYGGIMTIALAYCGTSSN 698
Query: 434 LKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRA 493
V+ LL H A + + + AVL + + + + R +E L + ++R
Sbjct: 699 KAVRKLL-HVAVS-DVNDDVRRVAVLSLGFILFRKHQSVP---RMVELLSESYNPHVRYG 753
Query: 494 VPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTN---NARIAGMLR 550
+ALG+ C +D L + D+ V A+I+L ++ N N R++ + +
Sbjct: 754 AAMALGISCAGTGLDEAIDLLEPMLKDSTDFVRQGALIALAMVLVQQNEAMNPRVSSLRK 813
Query: 551 NLS---SYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFAC 607
+ S ++DA F IA G++ G T++ L P GIV
Sbjct: 814 TMMKMVSDRHEDAMAKFGCAIALGIIDAGGRNCTISLQTQTGNLNMP----GIVGA---- 865
Query: 608 LDMKAVIVGKYHY--VLYFLVLAMQPRMLLTVDENLK 642
AV + +++ + +FL L+ P ++ VD+ L+
Sbjct: 866 ----AVFLQYWYWFPLTHFLSLSFAPTSVIGVDQKLE 898
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 173 (66.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 96/436 (22%), Positives = 188/436 (43%)
Query: 221 SSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD-NHVI---AGALLGVG 276
S+ WL+K+ K SA +SLG+I + + + Y N +G+L +G
Sbjct: 378 SNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSESGSLYALG 437
Query: 277 IVNCGIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTIL-NDA 335
+++ + + + L E + +A + GA +GLG++ T D + L ++L ND
Sbjct: 438 LIHA---SHGEEIIDYLVEKLHINNAILHHGASLGLGLAAMATGRDDLYEDLKSVLYND- 493
Query: 336 KSPLDVIAFSA--ISLGLIYVGS-CNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXX 392
D ++ A +++GL+ +GS + + + + +A E++ E
Sbjct: 494 ----DAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYA----HETQ-HEKTIRSLSMGLAFL 544
Query: 393 XXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEA 452
K+ES + E + + +Y M ++ AY GTG+ ++ LL H A + ++
Sbjct: 545 MYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLL-HVAVS-DGTDS 602
Query: 453 YQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMD 512
+ AV I V + E +++ L + ++R ALG+ C + + ++
Sbjct: 603 VRRAAVTCIGFVLSRQP---EKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALE 659
Query: 513 TLSRLSHDTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLS----SYYYKDANLLFCV 566
L L+ D+ V AA IS+ ++ T+ + A R L S +D+ F
Sbjct: 660 ILKSLTTDSVGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGA 719
Query: 567 RIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLV 626
+A G++ G T+ HS + A+ GI L + + +F+
Sbjct: 720 VLAFGVIDAGGRNSTIQ-LHSPSGHKNMNAIVGIAGFLQFWY---------WFPMTHFMG 769
Query: 627 LAMQPRMLLTVDENLK 642
LA+ P ++ +++NL+
Sbjct: 770 LALTPTSIIGLNKNLE 785
Score = 42 (19.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 71 IYLKFEEFPNALQIAL 86
+Y +FPN+++ AL
Sbjct: 70 VYYNLSDFPNSMEYAL 85
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 147 (56.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 92/429 (21%), Positives = 165/429 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVSQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 633
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWF----------WFPLSHFLSLAFTPTC 787
Query: 634 LLTVDENLK 642
++ ++++LK
Sbjct: 788 VIGLNKDLK 796
Score = 68 (29.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 147 (56.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 92/429 (21%), Positives = 165/429 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 395 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 454
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 455 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 512
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 513 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 566
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 567 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 625
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 626 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 680
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 681 DPVNYVRQGALIASALIMIQQTEITCPKVSQFRQLYSKVINDKHDDVMAKFGAILAQGIL 740
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 633
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 741 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWF----------WFPLSHFLSLAFTPTC 790
Query: 634 LLTVDENLK 642
++ ++++LK
Sbjct: 791 VIGLNKDLK 799
Score = 68 (29.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGADMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 145 (56.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 391 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 450
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 451 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 508
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 509 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 562
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 563 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 621
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 622 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTN 676
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 677 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 736
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 737 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 768
Score = 68 (29.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 196 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 251
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 91 DNSEYVETIIAKCIDHYTKQ 110
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 145 (56.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 85/392 (21%), Positives = 149/392 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLF 605
G +T++ P+ + +V T F
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQF 769
Score = 68 (29.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 143 (55.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 71/317 (22%), Positives = 125/317 (39%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N AQAI + E++ E + E
Sbjct: 510 EAA--GLALGLVMLGSKN---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLI 536
D + V A+I+ LI
Sbjct: 678 DPVNYVRQGALIASALI 694
Score = 107 (42.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 59/290 (20%), Positives = 119/290 (41%)
Query: 271 ALLGVGIVNCGIRNDCDPALALLSEYVGRE----DACIRIGAIMGLGISYAGTQNDQIRH 326
A +G+++ G + AL L++ Y+ ++ A G + LG+ +A D I +
Sbjct: 404 ATASLGVIHKGHEKE---ALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDY 460
Query: 327 KLSTILNDAKSPLDVIAFS-AISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXX 385
L+ + N + D++ ++ LGL +G+ ++V + L + ++ GE
Sbjct: 461 LLNQLKNASN---DIVRHGGSLGLGLAAMGTARQDVYDLLKTNLY-QDDAVTGEAAGLAL 516
Query: 386 XXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQ 445
Q + +T +EKI + + + Y G + + L+ +
Sbjct: 517 GLVMLGSKNA-QAIEDMVGYAQETQHEKILRGLAVGIALVMY---GRMEEADALIESLCR 572
Query: 446 HHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHL-LQYGEQNIRRAVPLALGLLCIS 504
+K + + +AM G AIR L H+ + ++RRA +LG +
Sbjct: 573 --DKDPILRRSGMYTVAMAYCGS--GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Query: 505 NPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSS 554
P+ +S LS + V A ++LG+ +GT N +L +++
Sbjct: 629 TPE-QCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 677
Score = 68 (29.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 142 (55.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 86/429 (20%), Positives = 163/429 (37%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 392 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 451
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L L++ + +R G +GLG++ GT + L T L +
Sbjct: 452 NHGGDIIDYL--LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS N + + ++ + ++ + E
Sbjct: 510 EAA--GLALGLVMLGSKNTQAIEDMVGYAQETQHEKI----LRGLAVGIALVMYGRMEEA 563
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + L
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESL 622
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G + E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 623 GFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTN 677
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 678 DPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGIL 737
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 633
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 738 DAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWF----------WFPLSHFLSLAYTPTC 787
Query: 634 LLTVDENLK 642
++ ++++LK
Sbjct: 788 IIGLNKDLK 796
Score = 69 (29.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDTQAVSDILEKLVKEDNLLMAYQICFDL 252
Score = 41 (19.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 89 DNMQYVKQIFTSCDDLLRKK 108
DN +YV+ I C D K+
Sbjct: 92 DNSEYVETIIAKCIDHYTKQ 111
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 144 (55.7 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 91/429 (21%), Positives = 165/429 (38%)
Query: 225 WLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNC 280
WL + K +A ASLG+I L + Y + A G L +G+++
Sbjct: 388 WLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHA 447
Query: 281 GIRNDCDPALALLSEYVGREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLD 340
D L LS+ + +R G +GLG++ GT + L + L +
Sbjct: 448 NHGGDIIDYL--LSQLKNASNDIVRHGGALGLGLAALGTARQDVYDLLKSNLYQDDAVTG 505
Query: 341 VIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESV 400
A ++LGL+ +GS + AQAI + E++ E + E
Sbjct: 506 EAA--GLALGLVMLGS---KSAQAIEDMVGYAQETQ-HEKILRGLAVGIAMVMYGRMEEA 559
Query: 401 EATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-L 459
+A E + I + M ++ AY G+GN ++ LL H A + + +
Sbjct: 560 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESI 618
Query: 460 GIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSH 519
G M E+ +++ S + ++R +ALG+ C ++ L +++
Sbjct: 619 GFIMFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINLLEPMTN 673
Query: 520 DTDSEVAMAAVISLGLIGSGTNNARI--AGMLRNLSSYYYKDAN----LLFCVRIAQGLV 573
D + V A+I+ LI R L S D + F +AQG++
Sbjct: 674 DPVNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGVL 733
Query: 574 HMGKGLLTLNPYHSDRFLLSPTALAGIVTTLFACLDMKAVIVGKYHYVLYFLVLAMQPRM 633
G +T++ P+ + +V T F + + +FL LA P
Sbjct: 734 DAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWF----------WFPLSHFLSLAFTPTA 783
Query: 634 LLTVDENLK 642
++ ++++LK
Sbjct: 784 IIGLNKDLK 792
Score = 66 (28.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + +Y+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 193 VLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 248
Score = 40 (19.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 690 KYIPLSPI-LEGFVILKENPDYRED 713
+Y P P+ G +ILK+ + E+
Sbjct: 905 RYQPFKPLHTGGIIILKDTSEEEEE 929
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 89 DNMQYVKQIFTSCDDLLRKKQ 109
D+ +YV+ I C D K++
Sbjct: 87 DDSEYVETIIAKCIDHYTKQR 107
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 123 (48.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 72/326 (22%), Positives = 128/326 (39%)
Query: 185 DSARQNLA--ATFV-NAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASL 241
D+ R ++ AT + N+F++ G D+ + + WL + K +A ASL
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFLR---------DNLEWLARATNWAKFTATASL 408
Query: 242 GMILLWDVDSGLAQIDKYFHSTDNHVIA----GALLGVGIVNCGIRNDCDPALALLSEYV 297
G+I L + Y + A G L +G+++ D L L++
Sbjct: 409 GVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYL--LNQLK 466
Query: 298 GREDACIRIGAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSC 357
+ +R G +GLG++ GT + L T L + A ++LGL+ +GS
Sbjct: 467 NASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAA--GLALGLVMLGSK 524
Query: 358 NEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKY 417
N AQAI + E++ E + E +A E + I +
Sbjct: 525 N---AQAIEDMVGYAQETQ-HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRR 580
Query: 418 CDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAV-LGIAMVAMAEELGLEMAI 476
M ++ AY G+GN ++ LL H A + + LG + E+ +++
Sbjct: 581 SGMYTVAMAYCGSGNNKAIRRLL-HVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSL 639
Query: 477 RSLEHLLQYGEQNIRRAVPLALGLLC 502
S + ++R +ALG+ C
Sbjct: 640 LSESY-----NPHVRYGADMALGICC 660
Score = 103 (41.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 59/293 (20%), Positives = 122/293 (41%)
Query: 271 ALLGVGIVNCGIRNDCDPALALLSEYVGRE----DACIRIGAIMGLGISYAGTQNDQIRH 326
A +G+++ G + AL L++ Y+ ++ A G + LG+ +A D I +
Sbjct: 404 ATASLGVIHKGHEKE---ALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDY 460
Query: 327 KLSTILNDAKSPLDVIAFS-AISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPXXXXX 385
L+ + N + D++ ++ LGL +G+ ++V + L + ++ GE
Sbjct: 461 LLNQLKNASN---DIVRHGGSLGLGLAAMGTARQDVYDLLKTNLY-QDDAVTGEAAGLAL 516
Query: 386 XXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQ 445
Q + +T +EKI + + + Y G + + L+ +
Sbjct: 517 GLVMLGSKNA-QAIEDMVGYAQETQHEKILRGLAVGIALVMY---GRMEEADALIESLCR 572
Query: 446 HHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHL-LQYGEQNIRRAVPLALGLLCIS 504
+K + + +AM G AIR L H+ + ++RRA +LG +
Sbjct: 573 --DKDPILRRSGMYTVAMAYCGS--GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Query: 505 NPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNNARIAGMLRNLSSYYY 557
P+ +S LS + V A ++LG+ +GT N + + ++ S+++
Sbjct: 629 TPE-QCPSVVSLLSESYNPHVRYGADMALGICCAGTGNKKSPKPMGSVLSWHH 680
Score = 68 (29.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 64 VLDIAYMIYLKFE--EFPNALQIALFLDNMQYVKQIFTSC---DDLLRKKQFCYIL 114
VL + IY+ E +F N Q +FLD+ Q V I D+LL Q C+ L
Sbjct: 197 VLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDL 252
>GENEDB_PFALCIPARUM|PF14_0632 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 151 (58.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 99/452 (21%), Positives = 182/452 (40%)
Query: 221 SSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD------NHV---IA-- 269
S+ WL K K SA ASLG++ V+ + + D N++ +A
Sbjct: 522 SNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPS 581
Query: 270 ------GALLGVGIVNCGIR-NDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQN 321
G+L +G+++ ND L+S+ D ++ G +GLG+ G N
Sbjct: 582 GVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSN 641
Query: 322 DQIRH-KLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEP 380
D+ + +L IL + A A ++GL+ +GS +++ ++ D ++
Sbjct: 642 DENTYDELKAILYSDSAVAGESA--AYAIGLLKLGSGDDKCIDELLAYAHDTQHEKI--- 696
Query: 381 XXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK--VQN 438
K+ ++ E + + I +Y M ++ AY G N K ++
Sbjct: 697 -TRACSISLGFVMFQKEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKK 755
Query: 439 LLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLAL 498
LL H + + + AV+ + V + L L++ ++R LAL
Sbjct: 756 LL-HFSVSDVSDDVRRA-AVIALGFVLCNSP---NQVPKFLNLLIESYNPHVRYGAALAL 810
Query: 499 GLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNN------ARIAGMLRNL 552
G+ C + ++ L L DT V +A ISLGLI +N + + +
Sbjct: 811 GIACSATANEEAINMLMPLLTDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKI 870
Query: 553 SSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRF-LLSPTALAGIVTTLFACLDMK 611
S ++D F ++ GL+ + G ++ + + R ++ P A AG LF+ L
Sbjct: 871 LSDKHEDIIAKFGAIVSAGLLDIC-GRNAISTFFTRRGNIIRPQAAAGFC--LFSQL--- 924
Query: 612 AVIVGKYHYVLYFLV-LAMQPRMLLTVDENLK 642
Y + L ++ L P L+ + E+LK
Sbjct: 925 -----WYWFPLIHMISLTFMPTCLIGLTEDLK 951
Score = 42 (19.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 67 IAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRK 107
+A IY E++ AL+ AL + +K+ + +L K
Sbjct: 74 LASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAK 114
>UNIPROTKB|Q8IKH3 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 151 (58.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 99/452 (21%), Positives = 182/452 (40%)
Query: 221 SSGNWLFKNKEHGKMSAAASLGMILLWDVDSGLAQIDKYFHSTD------NHV---IA-- 269
S+ WL K K SA ASLG++ V+ + + D N++ +A
Sbjct: 522 SNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPS 581
Query: 270 ------GALLGVGIVNCGIR-NDCDPALALLSEYVGR-EDACIRIGAIMGLGISYAGTQN 321
G+L +G+++ ND L+S+ D ++ G +GLG+ G N
Sbjct: 582 GVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSN 641
Query: 322 DQIRH-KLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEP 380
D+ + +L IL + A A ++GL+ +GS +++ ++ D ++
Sbjct: 642 DENTYDELKAILYSDSAVAGESA--AYAIGLLKLGSGDDKCIDELLAYAHDTQHEKI--- 696
Query: 381 XXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK--VQN 438
K+ ++ E + + I +Y M ++ AY G N K ++
Sbjct: 697 -TRACSISLGFVMFQKEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKK 755
Query: 439 LLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLAL 498
LL H + + + AV+ + V + L L++ ++R LAL
Sbjct: 756 LL-HFSVSDVSDDVRRA-AVIALGFVLCNSP---NQVPKFLNLLIESYNPHVRYGAALAL 810
Query: 499 GLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGSGTNN------ARIAGMLRNL 552
G+ C + ++ L L DT V +A ISLGLI +N + + +
Sbjct: 811 GIACSATANEEAINMLMPLLTDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKI 870
Query: 553 SSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRF-LLSPTALAGIVTTLFACLDMK 611
S ++D F ++ GL+ + G ++ + + R ++ P A AG LF+ L
Sbjct: 871 LSDKHEDIIAKFGAIVSAGLLDIC-GRNAISTFFTRRGNIIRPQAAAGFC--LFSQL--- 924
Query: 612 AVIVGKYHYVLYFLV-LAMQPRMLLTVDENLK 642
Y + L ++ L P L+ + E+LK
Sbjct: 925 -----WYWFPLIHMISLTFMPTCLIGLTEDLK 951
Score = 42 (19.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 67 IAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRK 107
+A IY E++ AL+ AL + +K+ + +L K
Sbjct: 74 LASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAK 114
>UNIPROTKB|C9JPC0 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AC078797 PANTHER:PTHR10943:SF1 HGNC:HGNC:9559
ChiTaRS:PSMD2 IPI:IPI00795529 ProteinModelPortal:C9JPC0
STRING:C9JPC0 PRIDE:C9JPC0 Ensembl:ENST00000417952
HOGENOM:HOG000213397 ArrayExpress:C9JPC0 Bgee:C9JPC0 Uniprot:C9JPC0
Length = 217
Score = 129 (50.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 51 SAAKYLPGPDDMLVLDIAYMIYLKFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKK 108
S Y+P P++ +L A ++ KF FP AL++AL L++M+ V+ IFTSC D++ +K
Sbjct: 160 SCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQK 217
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 139 (54.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 101/464 (21%), Positives = 180/464 (38%)
Query: 192 AATFVNAFVNAGFGQDKLMTVPSDASSGGSSGNWLFKNKEHGKMSAAASLGMILLWDVDS 251
A NAF+++G D+ + D WL + K++A ASLG+I
Sbjct: 383 ATVIANAFMHSGTTSDQFLRDNLD---------WLARATNWAKLTATASLGVIHRGHEKD 433
Query: 252 GLAQIDKYFHS----TDNHVIAGALLGVGIVNCGI-RNDCDPALALLSEYVGREDACIRI 306
LA + Y + + GAL +G+++ N D LL + ++ +R
Sbjct: 434 SLALMQSYLPKEAGPSSGYSEGGALYALGLIHANHGANIID---YLLQQLKDAQNENVRH 490
Query: 307 GAIMGLGISYAGTQNDQIRHKLSTILNDAKSPLDVIAFSAISLGLIYVGSCNEEVAQAII 366
G +GLG++ GT + +L L + A I++G++ +GS N AQAI
Sbjct: 491 GGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAA--GIAMGMVMLGSKN---AQAIE 545
Query: 367 FALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCA 426
+ E++ + +E+ +S + +R+ M ++ A
Sbjct: 546 DMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRR-SGMYTIAMA 604
Query: 427 YAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYG 486
Y GTG+ ++ LL H A + + AV I + E + L +
Sbjct: 605 YNGTGSNKAIRKLL-HVAVSDVNDDVRRA-AVTAIGFILFRSP---EQCPSVVSLLAESY 659
Query: 487 EQNIRRAVPLALGLLCISNPKVNVMDTLSRL-SHDTDSEVAMAAVISLGLI------GSG 539
++R +ALG+ C + L + D + V A+I+ +I S
Sbjct: 660 NPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVRQGALIASAMILIQHTDQSC 719
Query: 540 TNNARIAGMLRNLSSYYYKDANLLFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPTALAG 599
+ + + S ++D + +AQG++ G TL+ L S T
Sbjct: 720 PKSTFFRQLYAEVISNKHEDVMAKYGAILAQGIIDAGGRNATLS-------LQSRTGH-- 770
Query: 600 IVTTLFACLDMKAVIVGKYHYVL-YFLVLAMQPRMLLTVDENLK 642
T L A + M A Y + L + L LA P ++ ++ +LK
Sbjct: 771 --TNLQAVVGMLAFTQYWYWFPLAHTLSLAFTPTCVIGLNSDLK 812
Score = 43 (20.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/73 (24%), Positives = 28/73 (38%)
Query: 48 YLTSAAKYLPGPDDMLVLD------IAYMIY--LKFEEFPNALQIALFLDNMQYVKQIFT 99
Y+ +++ P + V+D + MI L +F AL IAL M K
Sbjct: 109 YIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIM 168
Query: 100 SCDDLLRKKQFCY 112
DD+ + Y
Sbjct: 169 KSDDVRGMLAYAY 181
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 714 652 0.00095 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 616 (65 KB)
Total size of DFA: 321 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.39u 0.15s 47.54t Elapsed: 00:00:02
Total cpu time: 47.40u 0.15s 47.55t Elapsed: 00:00:02
Start: Sat May 11 10:10:50 2013 End: Sat May 11 10:10:52 2013