Query 005099
Match_columns 714
No_of_seqs 407 out of 2957
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 15:19:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005099.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005099hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 2E-110 6E-115 966.8 68.3 597 75-673 1-604 (605)
2 2kho_A Heat shock protein 70; 100.0 4E-108 1E-112 947.8 57.0 596 76-673 2-604 (605)
3 3d2f_A Heat shock protein homo 100.0 3E-104 1E-108 921.5 60.9 590 76-673 2-626 (675)
4 1yuw_A Heat shock cognate 71 k 100.0 1E-97 4E-102 852.6 44.6 539 75-619 3-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 3.1E-91 1.1E-95 792.7 50.6 508 76-609 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.1E-64 3.9E-69 559.8 40.2 373 75-453 22-403 (404)
7 1dkg_D Molecular chaperone DNA 100.0 1.1E-63 3.7E-68 548.1 35.7 375 76-452 2-383 (383)
8 4gni_A Putative heat shock pro 100.0 3.5E-63 1.2E-67 548.8 39.7 372 76-453 13-403 (409)
9 3qfu_A 78 kDa glucose-regulate 100.0 5E-63 1.7E-67 544.6 40.1 372 75-452 17-394 (394)
10 1jce_A ROD shape-determining p 100.0 1.5E-42 5.3E-47 374.5 26.4 314 76-452 3-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 5.8E-42 2E-46 342.8 25.5 216 458-673 1-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 1.1E-38 3.8E-43 322.1 26.3 214 461-674 1-214 (227)
13 3n8e_A Stress-70 protein, mito 100.0 7.7E-34 2.6E-38 274.8 13.9 165 455-619 17-181 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 2.7E-31 9.4E-36 250.5 15.2 150 460-609 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 1.6E-31 5.5E-36 251.7 13.2 150 460-609 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 1.4E-31 4.8E-36 251.8 10.7 150 460-609 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 100.0 6.1E-29 2.1E-33 235.6 13.9 150 460-609 2-152 (152)
18 2fsj_A Hypothetical protein TA 100.0 5.1E-29 1.7E-33 268.5 14.0 229 181-449 92-343 (346)
19 2ych_A Competence protein PILM 100.0 1.2E-28 4E-33 269.2 16.9 317 75-449 12-373 (377)
20 3h1q_A Ethanolamine utilizatio 99.9 2.8E-26 9.6E-31 238.9 26.3 203 187-448 70-272 (272)
21 2fxu_A Alpha-actin-1, actin, a 99.9 1.5E-26 5.2E-31 252.2 19.6 298 77-450 6-349 (375)
22 1k8k_A ARP3, actin-like protei 99.9 2.2E-26 7.4E-31 254.8 19.6 308 75-450 4-387 (418)
23 4a2a_A Cell division protein F 99.9 1.7E-25 5.7E-30 246.4 24.3 198 223-450 168-393 (419)
24 2zgy_A Plasmid segregation pro 99.9 8E-24 2.7E-28 225.7 13.9 227 181-448 71-319 (320)
25 1q5l_A Chaperone protein DNAK; 99.9 1.4E-23 4.8E-28 193.8 11.1 121 455-575 14-134 (135)
26 1k8k_B ARP2, actin-like protei 99.8 1E-21 3.6E-26 215.3 3.2 214 210-450 105-364 (394)
27 4ehu_A Activator of 2-hydroxyi 99.8 8.3E-20 2.8E-24 190.4 9.5 217 188-452 37-256 (276)
28 3js6_A Uncharacterized PARM pr 99.7 5.8E-17 2E-21 174.5 18.7 204 211-453 115-339 (355)
29 4apw_A ALP12; actin-like prote 99.6 2.1E-16 7.3E-21 168.6 9.4 203 210-451 106-325 (329)
30 3qb0_A Actin-related protein 4 99.6 2.8E-14 9.4E-19 158.9 20.0 179 77-311 24-209 (498)
31 3dwl_A Actin-related protein 3 99.5 4.6E-15 1.6E-19 163.4 8.6 244 187-450 102-396 (427)
32 3lof_A Heat shock 70 kDa prote 99.5 1.7E-14 5.7E-19 129.1 10.6 106 597-707 3-113 (113)
33 1ud0_A HSC70, 70 kDa heat-shoc 99.5 5E-14 1.7E-18 126.1 7.8 80 601-680 2-86 (113)
34 2p32_A Heat shock 70 kDa prote 99.4 1.5E-13 5E-18 124.2 7.1 79 598-676 13-96 (120)
35 4fo0_A Actin-related protein 8 99.3 3.3E-10 1.1E-14 130.5 26.2 118 186-312 170-294 (593)
36 2d0o_A DIOL dehydratase-reacti 99.3 2.3E-12 7.9E-17 140.2 6.7 199 222-449 367-603 (610)
37 1nbw_A Glycerol dehydratase re 99.2 3.5E-12 1.2E-16 139.3 6.1 196 224-448 371-604 (607)
38 1hux_A Activator of (R)-2-hydr 98.8 3.8E-07 1.3E-11 94.1 20.1 73 375-451 185-257 (270)
39 4am6_A Actin-like protein ARP8 98.2 1.8E-05 6.3E-10 89.2 14.8 127 210-348 222-349 (655)
40 2ews_A Pantothenate kinase; PA 97.2 0.0055 1.9E-07 63.1 15.1 46 403-448 237-286 (287)
41 2i7n_A Pantothenate kinase 1; 97.0 0.0067 2.3E-07 64.2 14.0 69 375-448 279-358 (360)
42 2ivn_A O-sialoglycoprotein end 96.7 0.82 2.8E-05 47.8 28.6 63 383-450 230-298 (330)
43 3eno_A Putative O-sialoglycopr 96.3 0.38 1.3E-05 50.6 21.3 68 381-453 233-306 (334)
44 3vgl_A Glucokinase; ROK family 96.0 0.71 2.4E-05 48.0 22.0 43 235-279 96-140 (321)
45 4db3_A Glcnac kinase, N-acetyl 96.0 0.85 2.9E-05 47.6 22.6 47 402-448 269-324 (327)
46 2e2o_A Hexokinase; acetate and 96.0 1.7 5.7E-05 44.5 24.6 48 402-450 239-287 (299)
47 3l0q_A Xylulose kinase; xlylul 95.9 0.013 4.6E-07 66.3 8.5 85 369-454 409-493 (554)
48 2itm_A Xylulose kinase, xylulo 95.9 0.011 3.9E-07 65.6 7.5 78 377-454 361-438 (484)
49 2qm1_A Glucokinase; alpha-beta 95.8 0.28 9.5E-06 51.0 17.4 42 235-278 108-151 (326)
50 3hz6_A Xylulokinase; xylulose, 95.8 0.015 5E-07 65.3 7.9 80 370-454 375-454 (511)
51 2zf5_O Glycerol kinase; hypert 95.8 0.017 5.7E-07 64.6 8.2 77 376-454 368-444 (497)
52 3ll3_A Gluconate kinase; xylul 95.7 0.02 7E-07 63.9 8.8 81 370-454 364-444 (504)
53 3r8e_A Hypothetical sugar kina 95.7 0.17 5.8E-06 52.8 15.3 42 236-279 119-162 (321)
54 4bc3_A Xylulose kinase; transf 95.6 0.018 6.2E-07 64.9 8.0 77 375-452 407-483 (538)
55 3vov_A Glucokinase, hexokinase 95.5 0.4 1.4E-05 49.5 17.3 42 235-278 98-141 (302)
56 2ch5_A NAGK protein; transfera 95.4 3.1 0.00011 43.3 28.5 60 208-272 70-132 (347)
57 3i8b_A Xylulose kinase; strain 95.4 0.02 7E-07 64.1 7.1 74 377-454 399-475 (515)
58 3g25_A Glycerol kinase; IDP007 95.3 0.02 6.9E-07 63.9 6.8 74 377-454 378-455 (501)
59 3ifr_A Carbohydrate kinase, FG 95.2 0.02 6.8E-07 64.1 6.4 52 402-454 400-451 (508)
60 3ezw_A Glycerol kinase; glycer 95.1 0.038 1.3E-06 62.1 8.2 53 401-454 401-453 (526)
61 3h3n_X Glycerol kinase; ATP-bi 95.0 0.024 8.2E-07 63.4 6.4 52 402-454 403-454 (506)
62 2p3r_A Glycerol kinase; glycer 95.0 0.023 8E-07 63.6 6.2 52 402-454 401-452 (510)
63 4e1j_A Glycerol kinase; struct 94.9 0.023 7.9E-07 63.8 5.8 52 402-454 425-476 (520)
64 3jvp_A Ribulokinase; PSI-II, N 94.9 0.027 9.2E-07 64.0 6.4 80 370-453 410-490 (572)
65 2dpn_A Glycerol kinase; thermu 94.9 0.045 1.5E-06 61.0 8.0 76 377-453 372-448 (495)
66 2d4w_A Glycerol kinase; alpha 94.5 0.046 1.6E-06 61.0 6.8 52 402-454 403-454 (504)
67 2w40_A Glycerol kinase, putati 94.3 0.044 1.5E-06 61.2 6.2 51 402-453 406-457 (503)
68 3cer_A Possible exopolyphospha 94.1 0.2 6.9E-06 52.8 10.4 76 226-305 106-191 (343)
69 3en9_A Glycoprotease, O-sialog 94.0 6.1 0.00021 44.1 23.1 184 208-426 72-272 (540)
70 1t6c_A Exopolyphosphatase; alp 93.9 0.11 3.7E-06 54.2 7.9 76 225-305 100-177 (315)
71 2uyt_A Rhamnulokinase; rhamnos 93.6 0.064 2.2E-06 59.6 5.9 47 402-450 393-439 (489)
72 2ap1_A Putative regulator prot 93.5 6.2 0.00021 40.7 20.8 42 235-278 120-163 (327)
73 1u6z_A Exopolyphosphatase; alp 92.6 0.45 1.5E-05 53.1 10.7 74 226-305 100-176 (513)
74 1z6r_A MLC protein; transcript 92.1 3.5 0.00012 44.1 16.9 42 235-278 186-229 (406)
75 1sz2_A Glucokinase, glucose ki 91.9 13 0.00045 38.4 25.6 45 234-279 100-156 (332)
76 1zbs_A Hypothetical protein PG 91.6 1.8 6.3E-05 44.1 13.3 68 377-450 211-280 (291)
77 3mdq_A Exopolyphosphatase; str 90.6 0.51 1.7E-05 49.1 7.9 75 225-305 92-170 (315)
78 3h6e_A Carbohydrate kinase, FG 89.2 0.26 9E-06 54.5 4.5 71 375-450 362-435 (482)
79 3bex_A Type III pantothenate k 88.6 1.8 6.1E-05 43.3 9.8 21 77-97 4-24 (249)
80 1zc6_A Probable N-acetylglucos 86.8 29 0.00098 35.2 26.7 65 377-450 227-293 (305)
81 3ven_A O-carbamoyltransferase 86.1 4.2 0.00015 45.5 11.9 67 383-454 293-361 (576)
82 3o8m_A Hexokinase; rnaseh-like 85.2 8.7 0.0003 42.1 13.6 58 221-280 184-243 (485)
83 3qbx_A Anhydro-N-acetylmuramic 83.7 1.6 5.5E-05 46.0 6.7 72 376-450 260-336 (371)
84 2yhx_A Hexokinase B; transfera 83.0 2.7 9.1E-05 46.0 8.4 55 223-279 164-220 (457)
85 1woq_A Inorganic polyphosphate 82.7 16 0.00055 36.3 13.7 42 235-278 114-158 (267)
86 2hoe_A N-acetylglucosamine kin 82.6 10 0.00035 40.1 12.7 66 207-278 147-229 (380)
87 3hi0_A Putative exopolyphospha 79.3 3.9 0.00013 45.3 8.2 74 225-304 103-178 (508)
88 3mcp_A Glucokinase; structural 77.4 17 0.00057 38.4 12.1 43 235-279 108-165 (366)
89 3cqy_A Anhydro-N-acetylmuramic 77.3 3.3 0.00011 43.7 6.4 72 375-450 266-342 (370)
90 1bdg_A Hexokinase; phosphotran 75.8 18 0.00061 39.3 12.0 56 221-279 171-228 (451)
91 4htl_A Beta-glucoside kinase; 75.0 25 0.00086 35.5 12.4 49 402-450 237-291 (297)
92 3epq_A Putative fructokinase; 71.9 30 0.001 35.2 12.1 43 235-279 97-141 (302)
93 1z05_A Transcriptional regulat 71.7 19 0.00064 38.7 11.0 42 235-278 208-251 (429)
94 4g9i_A Hydrogenase maturation 68.8 8 0.00027 45.1 7.5 61 385-450 693-759 (772)
95 2gup_A ROK family protein; sug 68.5 12 0.0004 37.8 8.1 43 234-278 93-135 (292)
96 3ttc_A HYPF, transcriptional r 68.4 8.7 0.0003 43.7 7.6 49 402-450 599-651 (657)
97 3aap_A Ectonucleoside triphosp 67.8 7.8 0.00027 40.7 6.6 43 236-279 108-158 (353)
98 2yhw_A Bifunctional UDP-N-acet 65.3 54 0.0018 33.7 12.7 42 235-278 131-174 (343)
99 3l0q_A Xylulose kinase; xlylul 64.3 4.4 0.00015 45.4 4.1 21 75-95 4-24 (554)
100 1nbw_A Glycerol dehydratase re 63.6 33 0.0011 38.1 10.5 43 210-252 131-174 (607)
101 3ifr_A Carbohydrate kinase, FG 63.2 4.7 0.00016 44.6 4.1 21 75-95 6-26 (508)
102 3vth_A Hydrogenase maturation 62.7 12 0.0004 43.5 7.3 64 385-453 681-750 (761)
103 1cza_N Hexokinase type I; stru 62.0 42 0.0015 39.9 12.2 57 221-279 630-689 (917)
104 1iv0_A Hypothetical protein; r 61.4 5.4 0.00018 33.6 3.1 19 77-95 2-20 (98)
105 1nu0_A Hypothetical protein YQ 60.8 8 0.00027 34.8 4.4 22 75-96 2-23 (138)
106 3cj1_A Ectonucleoside triphosp 60.1 51 0.0017 35.7 11.5 42 238-279 150-208 (456)
107 3i8b_A Xylulose kinase; strain 59.2 6.6 0.00022 43.6 4.3 20 75-94 4-23 (515)
108 3h3n_X Glycerol kinase; ATP-bi 58.1 7 0.00024 43.2 4.3 21 75-95 4-24 (506)
109 3djc_A Type III pantothenate k 57.5 6.7 0.00023 39.5 3.6 22 76-97 2-23 (266)
110 3jvp_A Ribulokinase; PSI-II, N 57.3 6.7 0.00023 44.1 4.0 21 75-95 4-24 (572)
111 4e1j_A Glycerol kinase; struct 57.1 8.4 0.00029 42.7 4.7 20 76-95 26-45 (520)
112 3ll3_A Gluconate kinase; xylul 55.7 7 0.00024 43.2 3.8 21 75-95 3-23 (504)
113 3h6e_A Carbohydrate kinase, FG 55.1 5.6 0.00019 43.8 2.8 21 75-95 5-25 (482)
114 4bc3_A Xylulose kinase; transf 55.0 8.1 0.00028 43.0 4.2 21 75-95 9-29 (538)
115 2p3r_A Glycerol kinase; glycer 54.7 7.8 0.00027 42.9 3.9 21 75-95 2-22 (510)
116 3hz6_A Xylulokinase; xylulose, 54.4 7.6 0.00026 43.0 3.8 21 75-95 4-24 (511)
117 2e1z_A Propionate kinase; TDCD 53.0 72 0.0024 34.0 10.8 44 379-426 311-355 (415)
118 3hm8_A Hexokinase-3; glucose, 53.0 1.3E+02 0.0044 32.4 12.9 58 221-280 159-219 (445)
119 2w40_A Glycerol kinase, putati 52.6 8.5 0.00029 42.5 3.8 21 75-95 3-23 (503)
120 1g99_A Acetate kinase; alpha/b 52.5 62 0.0021 34.4 10.2 45 378-426 302-347 (408)
121 1cza_N Hexokinase type I; stru 52.5 53 0.0018 39.0 10.8 56 221-279 182-240 (917)
122 3ezw_A Glycerol kinase; glycer 52.3 8.1 0.00028 42.9 3.6 20 76-95 4-23 (526)
123 2dpn_A Glycerol kinase; thermu 51.6 8.1 0.00028 42.5 3.4 20 76-95 2-21 (495)
124 4fla_A Regulation of nuclear P 49.5 1E+02 0.0035 27.9 9.8 104 570-673 16-146 (152)
125 2ews_A Pantothenate kinase; PA 49.4 9.2 0.00031 38.9 3.1 22 75-96 19-40 (287)
126 2uyt_A Rhamnulokinase; rhamnos 49.4 8.6 0.00029 42.2 3.2 20 75-94 3-22 (489)
127 2zf5_O Glycerol kinase; hypert 49.0 11 0.00036 41.6 3.8 20 76-95 3-22 (497)
128 4ijn_A Acetate kinase, acetoki 47.8 1.2E+02 0.0043 31.9 11.5 46 377-426 302-348 (398)
129 1vhx_A Putative holliday junct 46.8 11 0.00039 34.2 3.0 19 77-95 4-22 (150)
130 3g25_A Glycerol kinase; IDP007 46.5 12 0.00041 41.2 3.8 20 76-95 6-25 (501)
131 1hjr_A Holliday junction resol 46.3 21 0.00071 32.8 4.7 18 77-94 2-19 (158)
132 1ud0_A HSC70, 70 kDa heat-shoc 46.0 33 0.0011 29.1 5.8 14 632-645 7-20 (113)
133 4htl_A Beta-glucoside kinase; 45.4 37 0.0013 34.2 7.1 42 235-278 97-140 (297)
134 3cet_A Conserved archaeal prot 45.0 13 0.00044 38.5 3.4 37 241-279 109-145 (334)
135 3zx3_A Ectonucleoside triphosp 44.7 56 0.0019 35.4 8.5 88 192-279 89-199 (452)
136 2aa4_A Mannac kinase, putative 44.1 27 0.00091 35.0 5.7 46 403-448 234-286 (289)
137 3f9m_A Glucokinase; hexokinase 43.4 1.2E+02 0.004 32.9 10.9 56 221-279 183-241 (470)
138 2gup_A ROK family protein; sug 42.5 42 0.0014 33.6 6.9 48 403-450 228-287 (292)
139 2itm_A Xylulose kinase, xylulo 41.6 14 0.00049 40.3 3.4 18 78-95 2-19 (484)
140 2iir_A Acetate kinase; transfe 40.1 1.6E+02 0.0054 31.2 10.9 45 378-426 302-347 (403)
141 2d4w_A Glycerol kinase; alpha 39.1 18 0.00063 39.7 3.8 19 77-95 3-21 (504)
142 3mxz_A Tubulin-specific chaper 38.0 1.2E+02 0.0041 26.2 7.9 80 581-661 17-105 (116)
143 3khy_A Propionate kinase; csgi 37.9 73 0.0025 33.5 7.8 44 379-426 294-338 (384)
144 2d0o_A DIOL dehydratase-reacti 37.1 1.6E+02 0.0056 32.5 10.6 35 208-242 127-161 (610)
145 4ep4_A Crossover junction endo 36.7 23 0.00079 32.8 3.4 18 77-94 2-19 (166)
146 3o8m_A Hexokinase; rnaseh-like 36.3 69 0.0024 35.0 7.7 24 260-283 79-102 (485)
147 1saz_A Probable butyrate kinas 35.7 67 0.0023 33.7 7.4 48 402-449 295-347 (381)
148 2zqm_A Prefoldin beta subunit 35.4 2E+02 0.0068 24.2 10.3 44 630-674 67-110 (117)
149 1h7c_A Tubulin-specific chaper 35.2 2E+02 0.0068 24.4 8.8 81 581-662 16-103 (108)
150 3r9p_A ACKA; ssgcid, seattle s 34.9 2.3E+02 0.008 29.7 11.1 46 377-426 293-339 (391)
151 3htv_A D-allose kinase, alloki 33.3 85 0.0029 31.8 7.5 49 402-450 239-299 (310)
152 2hc5_A ORF 99, hypothetical pr 33.2 55 0.0019 28.3 5.0 43 541-590 56-99 (117)
153 3sk3_A Acetate kinase, acetoki 31.7 2.9E+02 0.0099 29.3 11.3 47 377-426 317-364 (415)
154 1gs9_A Apolipoprotein E, APOE4 31.7 2.7E+02 0.0091 25.4 9.8 54 601-666 108-161 (165)
155 2h3g_X Biosynthetic protein; p 31.2 31 0.0011 34.5 3.6 20 78-97 2-21 (268)
156 1hnj_A Beta-ketoacyl-acyl carr 30.9 45 0.0015 33.8 5.0 50 377-429 212-261 (317)
157 2yhx_A Hexokinase B; transfera 30.0 1.2E+02 0.004 32.8 8.2 25 260-284 60-84 (457)
158 2dfs_A Myosin-5A; myosin-V, in 29.9 2.6E+02 0.0088 33.8 11.9 16 73-88 218-233 (1080)
159 1zxo_A Conserved hypothetical 29.9 21 0.00073 35.9 2.2 67 379-449 211-277 (291)
160 3nmd_A CGMP dependent protein 28.6 1.8E+02 0.0062 22.7 6.7 37 588-624 32-68 (72)
161 3epq_A Putative fructokinase; 28.5 1.1E+02 0.0036 31.0 7.2 20 76-95 3-22 (302)
162 1kae_A HDH, histidinol dehydro 28.5 95 0.0032 33.1 6.8 44 209-256 154-198 (434)
163 3zyy_X Iron-sulfur cluster bin 27.6 1E+02 0.0035 34.8 7.3 57 366-423 499-555 (631)
164 1ge9_A Ribosome recycling fact 27.4 3.6E+02 0.012 25.1 10.0 60 574-643 105-164 (184)
165 3htv_A D-allose kinase, alloki 27.2 37 0.0013 34.6 3.4 42 235-278 107-149 (310)
166 2odv_A Plectin 1, HD1; plakin 26.7 3.4E+02 0.012 26.2 10.2 44 576-621 41-84 (235)
167 1ub7_A 3-oxoacyl-[acyl-carrier 26.4 58 0.002 33.0 4.9 48 379-429 216-263 (322)
168 3zsu_A TLL2057 protein, cyanoq 26.0 3.3E+02 0.011 23.8 9.2 92 574-665 13-124 (130)
169 4gfq_A Ribosome-recycling fact 25.9 4.3E+02 0.015 25.1 10.3 63 574-643 127-189 (209)
170 2ebd_A 3-oxoacyl-[acyl-carrier 25.3 62 0.0021 32.5 4.8 47 380-429 207-253 (309)
171 1saz_A Probable butyrate kinas 25.1 54 0.0019 34.5 4.4 21 76-96 2-22 (381)
172 1zxo_A Conserved hypothetical 24.3 7.2 0.00025 39.5 -2.6 59 209-272 58-118 (291)
173 1msz_A DNA-binding protein smu 24.0 59 0.002 26.5 3.3 28 212-239 34-61 (86)
174 1qsd_A Protein (beta-tubulin b 23.9 2E+02 0.0069 24.3 6.8 80 581-661 13-97 (106)
175 2a01_A Apolipoprotein A-I; fou 23.8 91 0.0031 30.6 5.4 48 600-647 133-187 (243)
176 4am6_A Actin-like protein ARP8 23.6 36 0.0012 38.5 2.6 48 380-427 476-525 (655)
177 3fcg_A F1 capsule-anchoring pr 23.6 1.5E+02 0.0053 24.2 5.8 54 504-571 26-79 (90)
178 2f9w_A Pantothenate kinase; CO 23.3 59 0.002 32.6 4.0 22 76-97 23-45 (271)
179 3ls0_A SLL1638 protein, PSBQ; 23.2 3.8E+02 0.013 23.5 8.8 74 574-647 15-98 (133)
180 3nuw_A 2-OXO-3-deoxygalactonat 22.8 93 0.0032 31.5 5.3 44 404-449 248-291 (295)
181 3cet_A Conserved archaeal prot 22.5 52 0.0018 34.0 3.4 39 77-115 1-44 (334)
182 2yhw_A Bifunctional UDP-N-acet 21.9 1.7E+02 0.0058 29.8 7.4 21 75-95 29-49 (343)
183 1mzj_A Beta-ketoacylsynthase I 21.8 84 0.0029 32.1 5.0 47 380-429 228-274 (339)
184 3f9m_A Glucokinase; hexokinase 21.5 1.2E+02 0.0041 32.9 6.2 24 260-283 76-99 (470)
185 1zow_A 3-oxoacyl-[acyl-carrier 21.5 85 0.0029 31.6 4.9 48 379-429 208-255 (313)
186 3uun_A Dystrophin; triple heli 20.9 2E+02 0.0069 23.7 6.6 15 606-620 12-26 (119)
187 3hm8_A Hexokinase-3; glucose, 20.6 1.8E+02 0.0063 31.2 7.4 29 260-289 58-86 (445)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.8e-110 Score=966.82 Aligned_cols=597 Identities=55% Similarity=0.880 Sum_probs=575.3
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh-
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE- 153 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~- 153 (714)
|+.+||||||||||+||++++|.++++.|..|++++||+|+|.+++++++|..|+.+...+|.++++++||+||+.+++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 4579999999999999999999999999999999999999999888999999999999999999999999999999886
Q ss_pred -hhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHHH
Q 005099 154 -VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDAG 232 (714)
Q Consensus 154 -v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~Aa 232 (714)
++.+.+.+||.++...++.+.+.+. ++.++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++|+
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa 158 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVK--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEET--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEEC--CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 8889999999999988888888775 6789999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeeEEechhHHHHHHcccccCC-CceEEEEEeCCcceEEEEEEEcC----ceEEEEEecCCCCCChhHHHHHHHH
Q 005099 233 RIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGD----GVFEVLSTSGDTHLGGDDFDKRIVD 307 (714)
Q Consensus 233 ~~AGl~~~~li~Ep~AAAlay~~~~~~-~~~vLVvD~GgGT~Dvsv~~~~~----~~~~vl~~~gd~~lGG~d~D~~l~~ 307 (714)
++|||+++++++||+|||++|+..... +.++||||+||||||+|++++.+ +.++++++.++.++||++||+.|++
T Consensus 159 ~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~ 238 (605)
T 4b9q_A 159 RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLIN 238 (605)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHH
Confidence 999999999999999999999887643 68999999999999999999988 9999999999999999999999999
Q ss_pred HHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHH
Q 005099 308 WLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKT 387 (714)
Q Consensus 308 ~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~ 387 (714)
|+.++|+.+++.++..+++++.+|+.+||++|+.||...+..+.++.+..+..++.++.++|||++|+++++|+++++..
T Consensus 239 ~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~ 318 (605)
T 4b9q_A 239 YLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIE 318 (605)
T ss_dssp HHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877766667899999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCCCCCcEEEeeccCC
Q 005099 388 PVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLS 467 (714)
Q Consensus 388 ~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~~~~~~~~dv~~~s 467 (714)
+|+++|+++++...+|+.|+||||+|++|+|+++|+++||.++....||++|||+|||++|+.+++..+++++.|++|++
T Consensus 319 ~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~s 398 (605)
T 4b9q_A 319 PLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLS 398 (605)
T ss_dssp HHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSC
T ss_pred HHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCCeeEEEEEe
Q 005099 468 LGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDI 547 (714)
Q Consensus 468 lgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~f~i 547 (714)
||+++.+|.|.+|||||++||++++++|++..|+|+.+.|+|||||+.++.+|..||+|.|.++||+|+|.++|+|+|++
T Consensus 399 lgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~i 478 (605)
T 4b9q_A 399 LGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDI 478 (605)
T ss_dssp EEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEE
T ss_pred EEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhccCCC
Q 005099 548 DANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVP 627 (714)
Q Consensus 548 d~~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~~~~~~~~ 627 (714)
|.||+|+|++.++.||++.+++|.+..+||++||++|++++++++++|++.+++.++||+||+|+|++++.|+++.++++
T Consensus 479 d~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~~~ 558 (605)
T 4b9q_A 479 DADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEEAGDKLP 558 (605)
T ss_dssp CTTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred cCCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCC
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 005099 628 AEVKGKVEGKLKELKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYN 673 (714)
Q Consensus 628 ~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~i~~~~~~ 673 (714)
+++++++.+.++++++||+.+|.++|++++++|++.+.++..++|+
T Consensus 559 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 559 ADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999996
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.5e-108 Score=947.75 Aligned_cols=596 Identities=55% Similarity=0.887 Sum_probs=569.0
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh--
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE-- 153 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~-- 153 (714)
+.+||||||||||+||++.+|.++++.|++|++++||+|+|.++++++||..|+.+...+|+++++++||+||+.+++
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 468999999999999999999999999999999999999998878999999999999999999999999999999875
Q ss_pred hhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHHHH
Q 005099 154 VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDAGR 233 (714)
Q Consensus 154 v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~Aa~ 233 (714)
++.+.+.+||.++.+.+|.+.+.+. ++.++|++|++++|++|++.|+.+++.++.++|||||+||++.||+++++|++
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~ 159 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEVK--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGR 159 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEET--TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHH
Confidence 7778888999998888888888874 57899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCeeEEechhHHHHHHcccccC-CCceEEEEEeCCcceEEEEEEEc----CceEEEEEecCCCCCChhHHHHHHHHH
Q 005099 234 IAGLDVLRIINEPTAASLAYGFEKK-NNETILVFDLGGGTFDVSVLEVG----DGVFEVLSTSGDTHLGGDDFDKRIVDW 308 (714)
Q Consensus 234 ~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vLVvD~GgGT~Dvsv~~~~----~~~~~vl~~~gd~~lGG~d~D~~l~~~ 308 (714)
+|||+++++++||+|||++|+.+.. .+.++||||+||||||+|++++. ++.++++++.|+.++||++||+.|++|
T Consensus 160 ~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~ 239 (605)
T 2kho_A 160 IAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (605)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHH
T ss_pred HcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHH
Confidence 9999999999999999999998865 57899999999999999999998 789999999999999999999999999
Q ss_pred HHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 005099 309 LASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTP 388 (714)
Q Consensus 309 l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~ 388 (714)
+.++|+++++.++..+++++.+|+.+||++|+.||...++.+.++.+.++.+|+.++.++|||++|+++|+|+++++..+
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 319 (605)
T 2kho_A 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEP 319 (605)
T ss_dssp HHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999998898998999999999999999999999999899999887765445567788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCCCCCcEEEeeccCCc
Q 005099 389 VETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSL 468 (714)
Q Consensus 389 i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~~~~~~~~dv~~~sl 468 (714)
|+++|+++++.+.+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++.++++++.|++|++|
T Consensus 320 i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~sl 399 (605)
T 2kho_A 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSL 399 (605)
T ss_dssp HHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCE
T ss_pred HHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred ceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCCeeEEEEEec
Q 005099 469 GLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDID 548 (714)
Q Consensus 469 gi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~f~id 548 (714)
|+++.+|.|.+||+||++||++++++|++..|+|+.+.|+|||||+.++.+|..||+|.|.++||.|+|.++|+|+|++|
T Consensus 400 gi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 2kho_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEEC
T ss_pred cccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhccCCCH
Q 005099 549 ANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPA 628 (714)
Q Consensus 549 ~~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~~~~~~~~~ 628 (714)
.||+|+|++.++.||++.+++|+....||++||++|++++++++++|++.+++.++||+||+|+|+++++|+++.+++++
T Consensus 480 ~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~~~~~~~~ 559 (605)
T 2kho_A 480 ADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPA 559 (605)
T ss_dssp TTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCH
T ss_pred CCCceeEEEEEcCCCceeecccccccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCH
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 005099 629 EVKGKVEGKLKELKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYN 673 (714)
Q Consensus 629 ~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~i~~~~~~ 673 (714)
++++++.+.|+++++||++++.++|++++++|++.+++|..|+|+
T Consensus 560 ~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 560 DDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999889999999999999999999999986
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=3e-104 Score=921.54 Aligned_cols=590 Identities=26% Similarity=0.421 Sum_probs=549.5
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh--
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE-- 153 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~-- 153 (714)
+.+||||||||||+||++.+|.++++.|+.|++.+||+|+|.++ +++||..|+.+...+|.++++++||+||+.+++
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 35899999999999999999999999999999999999999876 899999999999999999999999999999875
Q ss_pred hhhhhccceeEEEEcCCCcEEEEe--CCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHH
Q 005099 154 VDEESKQVSYRVVRDENGNVKLEC--PAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDA 231 (714)
Q Consensus 154 v~~~~~~~~~~v~~~~~g~~~v~~--~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~A 231 (714)
++.+.++|||.++...+|.+.+.+ .++.+.++|++|++++|++|++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 788889999999988788776544 444578999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeeEEechhHHHHHHccccc-------CCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHH
Q 005099 232 GRIAGLDVLRIINEPTAASLAYGFEK-------KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR 304 (714)
Q Consensus 232 a~~AGl~~~~li~Ep~AAAlay~~~~-------~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~ 304 (714)
+++|||++++|++||+|||++|+... ..+.++||||+||||||+|++++.++.++|+++.++.++||++||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 99999999999999999999998754 24688999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHH
Q 005099 305 IVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDR 384 (714)
Q Consensus 305 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~ 384 (714)
|++|+..+|++++++++..+++++.+|+.+||++|+.||...++.+.++.+..+ .++.++|||++|+++|+|++++
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g----~~~~~~itr~~fe~l~~~l~~~ 316 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND----VDVSSQLSREELEELVKPLLER 316 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS----CCEEEEEEHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC----ceEEEEEeHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888877655 6788999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC--CCCcEEEe
Q 005099 385 LKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD--VSDIVLLD 462 (714)
Q Consensus 385 i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~--~~~~~~~d 462 (714)
+..+|+++|+++++++.+|+.|+||||+|++|+|++.|++.||.++..+.||++|||+|||++|+.|++. ++++.+.|
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~D 396 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFED 396 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEE
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEe
Confidence 9999999999999999999999999999999999999999999988899999999999999999999986 68999999
Q ss_pred eccCCcceeeeCCe----eEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccc-cCceeeEEEEeCCCCCCCC
Q 005099 463 VTPLSLGLETLGGV----MTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVR-DNKSLGSFRLDGIPPAPRG 537 (714)
Q Consensus 463 v~~~slgi~~~~~~----~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~-~n~~lg~~~l~~~~~~~~g 537 (714)
++|+|||+++.++. +.+||+||++||++++++|++..|+| +.+. |+|++.++. +|..||+|.|.++||.|+|
T Consensus 397 v~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 397 IHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp EECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCC
Confidence 99999999998874 99999999999999999999876643 3332 789999887 9999999999999999999
Q ss_pred C-CeeEEEEEecCCceEEEEEE----------EcCCCceeeeEEccC-CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 005099 538 V-PQIEVKFDIDANGILSVSAV----------DKGTGKKQDITITGA-STLPNDEVQRMVQEAERFAKEDKEKRDAIDTK 605 (714)
Q Consensus 538 ~-~~i~v~f~id~~gil~v~a~----------~~~t~~~~~i~i~~~-~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~ 605 (714)
. ++|+|+|++|.||+|+|++. ++.||++.+++|+.. ..||++||++|+++++++..+|++.+++.++|
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~ 553 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRK 553 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 7 49999999999999999995 789999999999987 58999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Q 005099 606 NQADSVVYQTEKQLKE-LGDKVPAEVKGKVEGKLKELKDAIAEG----STQAMKDTMAALNQEVMQLGQSLYN 673 (714)
Q Consensus 606 n~lE~~i~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~wl~~~----~~~~~~~~~~~l~~~~~~i~~~~~~ 673 (714)
|+||+|+|++|++|++ +.+++++++++++.+.|+++++||+++ ..++|++++++|++.++||..|++.
T Consensus 554 n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e 626 (675)
T 3d2f_A 554 NTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLA 626 (675)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 788999999999999999999999854 3899999999999999999988775
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1e-97 Score=852.61 Aligned_cols=539 Identities=53% Similarity=0.841 Sum_probs=508.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh-
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE- 153 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~- 153 (714)
|+.+||||||||||+||++.+|.++++.|++|++++||+|+|.++ +++||..|+.+...+|+++++++||+||+.+++
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 81 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDA 81 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCS
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcH
Confidence 456899999999999999999999999999999999999999876 899999999999999999999999999999875
Q ss_pred -hhhhhccceeEEEEcCCCcEE--EEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHH
Q 005099 154 -VDEESKQVSYRVVRDENGNVK--LECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKD 230 (714)
Q Consensus 154 -v~~~~~~~~~~v~~~~~g~~~--v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~ 230 (714)
++...+.|||.++.. +|... +.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++
T Consensus 82 ~v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~ 160 (554)
T 1yuw_A 82 VVQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKD 160 (554)
T ss_dssp HHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 788889999999853 55544 45555567899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeEEechhHHHHHHcccccC--CCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHH
Q 005099 231 AGRIAGLDVLRIINEPTAASLAYGFEKK--NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDW 308 (714)
Q Consensus 231 Aa~~AGl~~~~li~Ep~AAAlay~~~~~--~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~ 308 (714)
|++.||++++++++||+|||++|+.+.. .+.++||||+||||||+|++++.++.++++++.++.++||++||+.|++|
T Consensus 161 A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998754 36899999999999999999999999999999999999999999999999
Q ss_pred HHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 005099 309 LASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTP 388 (714)
Q Consensus 309 l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~ 388 (714)
+.++|+++++.++..+++++.+|+.+||++|+.||...+..+.++.+..+ .++...|+|++|+++++|+++++.++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~~~i~~~ 316 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRGTLDP 316 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHHHHTTHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999998988899999999999999999999999888998877654 67889999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcC-CCCCcCCCChhHHHhHHHHHHhHhhCC----CCCcEEEee
Q 005099 389 VETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTG-REPNVTVNPDEVVALGAAVQAGVLAGD----VSDIVLLDV 463 (714)
Q Consensus 389 i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg-~~~~~~~np~eaVA~GAa~~aa~ls~~----~~~~~~~dv 463 (714)
|+++|+++++.+.+|+.|+||||+|++|+|++.|++.|+ .++..+.||++|||+|||++|+.+++. ++++++.|+
T Consensus 317 i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv 396 (554)
T 1yuw_A 317 VEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDV 396 (554)
T ss_dssp HHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCB
T ss_pred HHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEe
Confidence 999999999999999999999999999999999999995 788899999999999999999999884 678999999
Q ss_pred ccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCCeeEE
Q 005099 464 TPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEV 543 (714)
Q Consensus 464 ~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v 543 (714)
+|++||+++.+|.|.++|+||++||++++++|++..|+|+.+.|.|||||+....+|..||+|.|.++||.|+|.++|+|
T Consensus 397 ~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v 476 (554)
T 1yuw_A 397 TPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 476 (554)
T ss_dssp CSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEE
T ss_pred eeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCceEEEEEEEcCCCceeeeEEccC-CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q 005099 544 KFDIDANGILSVSAVDKGTGKKQDITITGA-STLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQL 619 (714)
Q Consensus 544 ~f~id~~gil~v~a~~~~t~~~~~i~i~~~-~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l 619 (714)
+|++|.||+|+|++.++.||++.+++|..+ +.||++||++|++++++++++|++.+++.++||+||+|+|++|++|
T Consensus 477 ~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 477 TFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp EEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred EEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988 7799999999999999999999999999999999999999887654
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=3.1e-91 Score=792.67 Aligned_cols=508 Identities=64% Similarity=1.002 Sum_probs=476.9
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchhhh
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVEVD 155 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~v~ 155 (714)
+.+||||||||||+||++.+|.+++++|++|++++||+|+| .+++++||+.|+.+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~--- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK--- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC---
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE---
Confidence 46999999999999999999999999999999999999999 4568999999999999999 999999999998542
Q ss_pred hhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHHHHHc
Q 005099 156 EESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDAGRIA 235 (714)
Q Consensus 156 ~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~Aa~~A 235 (714)
+ .+. ++.++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++|++.|
T Consensus 77 ---------~----------~~~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~A 135 (509)
T 2v7y_A 77 ---------V----------EIE--GKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIA 135 (509)
T ss_dssp ---------E----------EET--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred ---------E----------EEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 1 122 4568899999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhcccc
Q 005099 236 GLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKR 315 (714)
Q Consensus 236 Gl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~ 315 (714)
|++++++++||+|||++|+.+...+.++||||+||||||++++++.++.++++++.++.++||++||+.|++|+.++|++
T Consensus 136 Gl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~ 215 (509)
T 2v7y_A 136 GLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQ 215 (509)
T ss_dssp TCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877788999999999999999999998999999999999999999999999999999998
Q ss_pred ccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005099 316 DEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRD 395 (714)
Q Consensus 316 ~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i~~~L~~ 395 (714)
+++.++..+++++.+|+.+||++|+.||...+..+.++.+.++.+|+.++.++|||++|+++++|+++++.++|+++|++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~ 295 (509)
T 2v7y_A 216 EHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQD 295 (509)
T ss_dssp HHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999988899998876644444577889999999999999999999999999999
Q ss_pred cCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCCCCCcEEEeeccCCcceeeeCC
Q 005099 396 AKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGG 475 (714)
Q Consensus 396 a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~~~~~~~~dv~~~slgi~~~~~ 475 (714)
+++.+.+|+.|+||||+|++|+|++.|++.|+.++....||+++||+|||++|+.+++.++++++.|++|++||+++.++
T Consensus 296 a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~slgi~~~~~ 375 (509)
T 2v7y_A 296 AGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMGG 375 (509)
T ss_dssp HTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEEEEEETTT
T ss_pred cCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeeccccceeecCC
Confidence 99988999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred eeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCCeeEEEEEecCCceEEE
Q 005099 476 VMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSV 555 (714)
Q Consensus 476 ~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~f~id~~gil~v 555 (714)
.|.+||+||++||++++++|++..|+|+.+.|.+||||+....+|..||+|.|.++||.|+|.++|+|+|++|.||+|+|
T Consensus 376 ~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v 455 (509)
T 2v7y_A 376 VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHV 455 (509)
T ss_dssp EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEE
T ss_pred ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 005099 556 SAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQAD 609 (714)
Q Consensus 556 ~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE 609 (714)
++.++.||++.+++|..+..||++||++|++++++++.+|++.+++.++||+||
T Consensus 456 ~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 456 RAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEEETTTCCEEEEEECSSCSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEEcCCCcEEEEEEEecCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999999999999998889999999999999999999999999999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.1e-64 Score=559.76 Aligned_cols=373 Identities=53% Similarity=0.818 Sum_probs=348.2
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh-
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE- 153 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~- 153 (714)
.+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++ +++||..|+.+...+|.++++++||+||+.+++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 457999999999999999999999999999999999999999887 899999999999999999999999999999876
Q ss_pred -hhhhhccceeEEEEcCCCc--EEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHH
Q 005099 154 -VDEESKQVSYRVVRDENGN--VKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKD 230 (714)
Q Consensus 154 -v~~~~~~~~~~v~~~~~g~--~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~ 230 (714)
++...+.|||.+.. .++. +.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 101 ~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 101 TVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 77888999999886 4444 4455554457899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeEEechhHHHHHHcccccC----CCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHH
Q 005099 231 AGRIAGLDVLRIINEPTAASLAYGFEKK----NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIV 306 (714)
Q Consensus 231 Aa~~AGl~~~~li~Ep~AAAlay~~~~~----~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~ 306 (714)
|++.||++++.+++||+|||++|+.... .+..+||||+||||||++++++.++.++++++.++..+||.+||+.|.
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 9999999999999999999999998765 578999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHH
Q 005099 307 DWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLK 386 (714)
Q Consensus 307 ~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~ 386 (714)
+++.++|+.+++.++..+++.+.+|+.+||++|+.||......+.++.+.++ .++.+.|+|++|+++++++++++.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g----~~~~~~i~r~~~~~~~~~~~~~i~ 335 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----VDFYTSITRARFEELNADLFRGTL 335 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHHHHTH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC----ceeEEEEcHHHHHHHHHHHHHHHH
Confidence 9999999998898988899999999999999999999999988888877665 778899999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc-CCCCCcCCCChhHHHhHHHHHHhHhhC
Q 005099 387 TPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT-GREPNVTVNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 387 ~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f-g~~~~~~~np~eaVA~GAa~~aa~ls~ 453 (714)
++|.++|+++++...+|+.|+||||+|++|+|++.|++.| +.++....||+++||+|||++|+++++
T Consensus 336 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 336 EPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999899999999999999999999999999 788889999999999999999999876
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.1e-63 Score=548.07 Aligned_cols=375 Identities=57% Similarity=0.935 Sum_probs=345.0
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh--
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE-- 153 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~-- 153 (714)
+.+||||||||||+||++.+|.++++.|++|++++||+|+|.++++++||..|+.+...+|+++++++|++||+.+++
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 468999999999999999999999999999999999999998877999999999999999999999999999998864
Q ss_pred hhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHHHH
Q 005099 154 VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDAGR 233 (714)
Q Consensus 154 v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~Aa~ 233 (714)
++...+.+||.++.+.++...+..+ ++.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~--g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~ 159 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEVK--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGR 159 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEET--TEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 7777788999998888888877774 56899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCeeEEechhHHHHHHcccccC-CCceEEEEEeCCcceEEEEEEEc----CceEEEEEecCCCCCChhHHHHHHHHH
Q 005099 234 IAGLDVLRIINEPTAASLAYGFEKK-NNETILVFDLGGGTFDVSVLEVG----DGVFEVLSTSGDTHLGGDDFDKRIVDW 308 (714)
Q Consensus 234 ~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vLVvD~GgGT~Dvsv~~~~----~~~~~vl~~~gd~~lGG~d~D~~l~~~ 308 (714)
.||++++.+++||+|||++|+.+.. .+.++||||+||||||+++++.. ++.++++++.++..+||++||+.|.++
T Consensus 160 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 239 (383)
T 1dkg_D 160 IAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (383)
T ss_dssp HTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHH
T ss_pred HcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999998754 57899999999999999999998 678899999998999999999999999
Q ss_pred HHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 005099 309 LASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTP 388 (714)
Q Consensus 309 l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~ 388 (714)
+.++|+.+++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.+..+|+.++.++|+|++|+++++|+++++.+.
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~ 319 (383)
T 1dkg_D 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEL 319 (383)
T ss_dssp HHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999888888888889999999999999999999988888888876654333356778999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhh
Q 005099 389 VETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLA 452 (714)
Q Consensus 389 i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls 452 (714)
|+++|+++++...+++.|+|+||+|++|+|++.|++.|+.++..+.||+++||+|||++|++|+
T Consensus 320 i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999888999999999999999999999999999899999999999999999998764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=3.5e-63 Score=548.81 Aligned_cols=372 Identities=30% Similarity=0.493 Sum_probs=338.4
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchhhh
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVEVD 155 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~v~ 155 (714)
..+||||||||||+||++.+|.++++.|+.|.+++||+|+|.++ +++||..|..+...+|.++++++|+++|+.+++..
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDG-DEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETT-EEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCC-cEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 47999999999999999999999999999999999999999865 89999999999999999999999999999998744
Q ss_pred hhhccceeEEEEcCCCcEEEEeCC------CCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHH
Q 005099 156 EESKQVSYRVVRDENGNVKLECPA------IGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATK 229 (714)
Q Consensus 156 ~~~~~~~~~v~~~~~g~~~v~~~~------~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~ 229 (714)
.....+++.+. ..+|.+.+.... ..+.++|+++++++|++|++.++.+++.++.++|||||++|++.||++|+
T Consensus 92 ~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 170 (409)
T 4gni_A 92 PTHNHASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALI 170 (409)
T ss_dssp CGGGTTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHH
T ss_pred hhhhcccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 44444555543 345666655542 35689999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeeEEechhHHHHHHccccc---CCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHH
Q 005099 230 DAGRIAGLDVLRIINEPTAASLAYGFEK---KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIV 306 (714)
Q Consensus 230 ~Aa~~AGl~~~~li~Ep~AAAlay~~~~---~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~ 306 (714)
+|++.|||+++.+++||+|||++|+... ..+..+||||+||||||++++++.++.++++++.++..+||++||+.|+
T Consensus 171 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~ 250 (409)
T 4gni_A 171 AAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLI 250 (409)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999874 4578999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccC--CCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHH
Q 005099 307 DWLASNFKRDEG--IDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDR 384 (714)
Q Consensus 307 ~~l~~~~~~~~~--~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~ 384 (714)
+++..+|..+++ .+...+++.+.+|+.+||++|+.||......+.++.+.++ .++.++|||++|+++++|++++
T Consensus 251 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~ 326 (409)
T 4gni_A 251 DHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG----LDFASTINRLRYETIARTVFEG 326 (409)
T ss_dssp HHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC----cceEEEeeHHHHHHHHHHHHHH
Confidence 999999998888 7888899999999999999999999999999999877665 7789999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCC--------CcCCCChhHHHhHHHHHHhHhhC
Q 005099 385 LKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREP--------NVTVNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 385 i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~--------~~~~np~eaVA~GAa~~aa~ls~ 453 (714)
+.++|+++|+++++...+|+.|+||||+|++|+|++.|++.|+.++ ....||+++||+|||++|+....
T Consensus 327 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 327 FNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 9999999999999998999999999999999999999999998753 57899999999999999997654
No 9
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=5e-63 Score=544.60 Aligned_cols=372 Identities=52% Similarity=0.809 Sum_probs=347.2
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh-
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE- 153 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~- 153 (714)
++.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++ ++++|..|+.+...+|.++++++|++||+++++
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 467999999999999999999999999999999999999999887 899999999999999999999999999999875
Q ss_pred -hhhhhccceeEEEEcCCCcE--EEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHH
Q 005099 154 -VDEESKQVSYRVVRDENGNV--KLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKD 230 (714)
Q Consensus 154 -v~~~~~~~~~~v~~~~~g~~--~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~ 230 (714)
++...+.+||.++ +.++.. .+.+.++.+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 96 SVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHH
Confidence 7888899999988 445544 345555557899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeEEechhHHHHHHcccccC-CCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHH
Q 005099 231 AGRIAGLDVLRIINEPTAASLAYGFEKK-NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWL 309 (714)
Q Consensus 231 Aa~~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l 309 (714)
|++.||++++++++||+|||++|+.... .+.++||||+||||||++++++.++.++++++.++.++||.+||+.|.+++
T Consensus 175 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 175 AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999977654 478999999999999999999999999999999999999999999999999
Q ss_pred HhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHH
Q 005099 310 ASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPV 389 (714)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i 389 (714)
.++|+.+++.++..+++.+.+|+.+||++|+.|+......+.++.+..+ .++.+.|+|++|+++++++++++.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~----~~~~~~i~r~~~~~~~~~~~~~i~~~i 330 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG----IDLSETLTRAKFEELNLDLFKKTLKPV 330 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT----EEEEEEEEHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC----ceeEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888999999999999999999999999988888877655 678899999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc-CCCCCcCCCChhHHHhHHHHHHhHhh
Q 005099 390 ETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT-GREPNVTVNPDEVVALGAAVQAGVLA 452 (714)
Q Consensus 390 ~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f-g~~~~~~~np~eaVA~GAa~~aa~ls 452 (714)
.++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+|||++|++++
T Consensus 331 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 331 EKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999999889999999999999999999999999 78899999999999999999999874
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.5e-42 Score=374.55 Aligned_cols=314 Identities=26% Similarity=0.347 Sum_probs=242.9
Q ss_pred CeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecC-CCE-EecHHHHHhhhhCCCchHHHHhHhhCCCchh
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKN-GDR-LVGQIAKRQAVVNPENTFFSVKRFIGRKMVE 153 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~-~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~ 153 (714)
+.+||||||||||++++..++ .++ .+||+|+|.++ +++ ++|+.|+.+...+|.++..
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 468999999999999875433 233 28999999876 554 7999998877777766421
Q ss_pred hhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHHHH
Q 005099 154 VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDAGR 233 (714)
Q Consensus 154 v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~Aa~ 233 (714)
.+|++ +|.+ .....++++++++|++++.. .+++ ...+|||||++|++.||+++++|++
T Consensus 62 ------~~p~~-----~g~i-------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~ 119 (344)
T 1jce_A 62 ------IRPMR-----DGVI-------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGL 119 (344)
T ss_dssp ------ECCEE-----TTEE-------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ------EecCC-----CCee-------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 01221 1211 11123566666666665542 1233 3789999999999999999999999
Q ss_pred HcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhcc
Q 005099 234 IAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNF 313 (714)
Q Consensus 234 ~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~ 313 (714)
.||++++.+++||+|||++|+.+...+.++||||+||||||+++++..... ..++..+||++||+.|.+++.+++
T Consensus 120 ~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~-----~~~~~~lGG~~id~~l~~~l~~~~ 194 (344)
T 1jce_A 120 EAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV-----TWESIRIAGDEMDEAIVQYVRETY 194 (344)
T ss_dssp HTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESCSHHHHHHHHHHHHHHHH
T ss_pred HcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE-----eeCCCCccChhHHHHHHHHHHHHh
Confidence 999999999999999999999877667899999999999999999876432 245679999999999999998876
Q ss_pred ccccCCCchhcHHHHHHHHHHHHHhhhhcCCCce------eeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHH
Q 005099 314 KRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQ------TNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKT 387 (714)
Q Consensus 314 ~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~------~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~ 387 (714)
+.... ...||++|+.|+.... ..+.++.. +..+..+..++|+|++|+++++|+++++.+
T Consensus 195 ~~~~~-------------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~ 259 (344)
T 1jce_A 195 RVAIG-------------ERTAERVKIEIGNVFPSKENDELETTVSGI--DLSTGLPRKLTLKGGEVREALRSVVVAIVE 259 (344)
T ss_dssp CEECC-------------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEE--ETTTTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred CcccC-------------HHHHHHHHHHHhccCccccCCcceEEEecc--ccCCCCceeEEEeHHHHHHHHHHHHHHHHH
Confidence 43221 4689999999997643 23444321 111114578999999999999999999999
Q ss_pred HHHHHHHHcCCC--CCCC-CEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhh
Q 005099 388 PVETSLRDAKLS--FKDL-DEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLA 452 (714)
Q Consensus 388 ~i~~~L~~a~~~--~~~i-~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls 452 (714)
.|+++|++++.. .+.+ +.|+|+||+|++|+|++.|++.|+.++....||+++||+||++++..++
T Consensus 260 ~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 260 SVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 999999987532 1224 6899999999999999999999998888889999999999999998654
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=5.8e-42 Score=342.79 Aligned_cols=216 Identities=52% Similarity=0.780 Sum_probs=209.4
Q ss_pred cEEEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCC
Q 005099 458 IVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRG 537 (714)
Q Consensus 458 ~~~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g 537 (714)
+++.|++|+||||++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+.++.+|..||+|.|.++||+|+|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEecCCceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHH
Q 005099 538 VPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEK 617 (714)
Q Consensus 538 ~~~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~ 617 (714)
.++|+|+|++|.||+|+|++.++.||++.+++|.+..+||++||++|++++++++.+|++.+++.++||+||+|+|.+++
T Consensus 81 ~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 81 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp CSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 005099 618 QLKELGDKVPAEVKGKVEGKLKELKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYN 673 (714)
Q Consensus 618 ~l~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~i~~~~~~ 673 (714)
.|+++.++++++++++|.+.|+++++||++++.++|++++++|++.+.+|..+.|+
T Consensus 161 ~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHGGGSCHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHhhhhCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988889999999999999999999999999999999999999999999999887
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.1e-38 Score=322.11 Aligned_cols=214 Identities=34% Similarity=0.588 Sum_probs=207.9
Q ss_pred EeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCCe
Q 005099 461 LDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQ 540 (714)
Q Consensus 461 ~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~~ 540 (714)
.|++|++|||++.+|.|.+|||||++||++++++|++..|+|+.+.|+||||++.++.+|..||+|.|.++||+|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 005099 541 IEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLK 620 (714)
Q Consensus 541 i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~ 620 (714)
|+|+|++|.||+|+|++.++.+|++.+++|.....||+++|++|++++++++.+|++.+++.+++|+||+|+|++|+.|+
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~ 160 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALA 160 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998878999999999999999999999999999999999999999999999
Q ss_pred HhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 005099 621 ELGDKVPAEVKGKVEGKLKELKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 674 (714)
Q Consensus 621 ~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~i~~~~~~~ 674 (714)
++.+++++++++++.+.|+++++||+++|.++|++++++|++.+.+|..|+|+.
T Consensus 161 ~~~~~~~~~~k~~i~~~l~~~~~wl~~~d~~~~~~~~~~L~~~~~~i~~r~~~~ 214 (227)
T 1u00_A 161 ADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQ 214 (227)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999998899999999999999999999998864
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-34 Score=274.77 Aligned_cols=165 Identities=59% Similarity=0.916 Sum_probs=154.3
Q ss_pred CCCcEEEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCC
Q 005099 455 VSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPA 534 (714)
Q Consensus 455 ~~~~~~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~ 534 (714)
...+.+.|++|+||||++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+.++.+|..||+|.|.++||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEecCCceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHH
Q 005099 535 PRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQ 614 (714)
Q Consensus 535 ~~g~~~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~ 614 (714)
|+|.++|+|+|++|.||+|+|++.++.||++.+++|.....||++||++|++++++++++|++.+++.++||+||+|+|+
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~ 176 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHD 176 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 005099 615 TEKQL 619 (714)
Q Consensus 615 ~~~~l 619 (714)
+|++|
T Consensus 177 ~~~~l 181 (182)
T 3n8e_A 177 TETKM 181 (182)
T ss_dssp CSCCC
T ss_pred HHHhh
Confidence 87654
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.97 E-value=2.7e-31 Score=250.49 Aligned_cols=150 Identities=57% Similarity=0.906 Sum_probs=145.9
Q ss_pred EEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCC
Q 005099 460 LLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 539 (714)
Q Consensus 460 ~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~ 539 (714)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+..+.+|..||+|.|.++||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEecCCceEEEEEEEcCCCceeeeEEccC-CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 005099 540 QIEVKFDIDANGILSVSAVDKGTGKKQDITITGA-STLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQAD 609 (714)
Q Consensus 540 ~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~-~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE 609 (714)
+|+|+|++|.||+|+|++.++.||++.+++|.+. +.||++||++|++++++|+.+|++.+++.++||+||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 789999999999999999999999999999999986
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.97 E-value=1.6e-31 Score=251.67 Aligned_cols=150 Identities=57% Similarity=0.905 Sum_probs=142.5
Q ss_pred EEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCC
Q 005099 460 LLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 539 (714)
Q Consensus 460 ~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~ 539 (714)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+..+.+|..||+|.|.++||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEecCCceEEEEEEEcCCCceeeeEEccC-CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 005099 540 QIEVKFDIDANGILSVSAVDKGTGKKQDITITGA-STLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQAD 609 (714)
Q Consensus 540 ~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~-~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE 609 (714)
+|+|+|++|.||+|+|++.++.||++.+++|.++ +.||++||++|++++++|+++|++.+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 669999999999999999999999999999999886
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.97 E-value=1.4e-31 Score=251.76 Aligned_cols=150 Identities=62% Similarity=0.964 Sum_probs=144.9
Q ss_pred EEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCC
Q 005099 460 LLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 539 (714)
Q Consensus 460 ~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~ 539 (714)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|+|+.+.|.|||||+.++.+|..||+|.|.++||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEecCCceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 005099 540 QIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQAD 609 (714)
Q Consensus 540 ~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE 609 (714)
+|+|+|++|.||+|+|++.|+.||++.+++|.+...||++||++|++++++|+++|++.+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988999999999999999999999999999999999886
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.96 E-value=6.1e-29 Score=235.58 Aligned_cols=150 Identities=55% Similarity=0.941 Sum_probs=145.0
Q ss_pred EEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCCCCCCC
Q 005099 460 LLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVP 539 (714)
Q Consensus 460 ~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~ 539 (714)
+.|++|++|||++.+|.|.+||+||++||++++++|++..|+|+.+.|.||||++.++.+|..||+|.|.++||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEecCCceEEEEEEEcCCCceeeeEEccC-CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 005099 540 QIEVKFDIDANGILSVSAVDKGTGKKQDITITGA-STLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQAD 609 (714)
Q Consensus 540 ~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~-~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE 609 (714)
+|+|+|++|.||+|+|++.++.+|++.+++|... +.||++||++|++++++|+.+|++.+++.++||+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999888 679999999999999999999999999999999886
No 18
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.96 E-value=5.1e-29 Score=268.53 Aligned_cols=229 Identities=17% Similarity=0.134 Sum_probs=172.7
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhcCCCcCeEE--EEecCCCCHHHHHHHHHHHHHc--------C------CCeeEEec
Q 005099 181 GKQFAAEEISAQVLRKLVDDASKFLNDSVTKAV--VTVPAYFNDSQRTATKDAGRIA--------G------LDVLRIIN 244 (714)
Q Consensus 181 ~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~V--ITVPa~f~~~qR~~l~~Aa~~A--------G------l~~~~li~ 244 (714)
+..+.+++...+++..|+..++...+.+ .++| |+||++|++.||+++++++..+ | ++.+++++
T Consensus 92 ~~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~ 170 (346)
T 2fsj_A 92 DGRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP 170 (346)
T ss_dssp TTCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred CCcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence 3445567778888888877653333333 4699 9999999999999999997765 4 35588999
Q ss_pred hhHHHHHHcccc--cC-CCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCc
Q 005099 245 EPTAASLAYGFE--KK-NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDL 321 (714)
Q Consensus 245 Ep~AAAlay~~~--~~-~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~ 321 (714)
||+|||++|... .. ...+++|||+||||||++++++.++. .+.+++++..+||++|++.|.+++.++++... ++
T Consensus 171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~--~i 247 (346)
T 2fsj_A 171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV--PF 247 (346)
T ss_dssp TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC--CH
T ss_pred cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc--CC
Confidence 999999998221 12 24789999999999999999988776 56666678899999999999999887764200 22
Q ss_pred hhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCC
Q 005099 322 LKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKF-EELCSDLLDRLKTPVETSLRDAKLSF 400 (714)
Q Consensus 322 ~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr~ef-e~l~~~l~~~i~~~i~~~L~~a~~~~ 400 (714)
. ...+| .. ..+.+. + . .++++++ +++++++++++.+.|++.|+++ .
T Consensus 248 ~---------~~~~e-------~~--~~~~~~----g----~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~ 294 (346)
T 2fsj_A 248 D---------LAQEA-------LS--HPVMFR----Q----K----QVGGPEVSGPILEDLANRIIENIRLNLRGE---V 294 (346)
T ss_dssp H---------HHHHH-------TT--SCEEET----T----E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---G
T ss_pred C---------HHHHh-------cC--CeEeEC----C----c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---h
Confidence 1 11222 00 112211 1 2 3558999 9999999999999999999876 4
Q ss_pred CCCCEEEEEcCCCCchhHHHHHHhhcCCCCCc---CCCChhHHHhHHHHHHh
Q 005099 401 KDLDEVILVGGSTRIPAVQELVKKMTGREPNV---TVNPDEVVALGAAVQAG 449 (714)
Q Consensus 401 ~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~---~~np~eaVA~GAa~~aa 449 (714)
++++.|+|+||++++ +++.|++.|+. ... ..||++|+|+|+..++.
T Consensus 295 ~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 295 DRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred hcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 568999999999999 99999999973 334 67999999999998764
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.96 E-value=1.2e-28 Score=269.18 Aligned_cols=317 Identities=18% Similarity=0.229 Sum_probs=211.4
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCCCEEecHHHHHhhhhCCCchHHHHhHhhCCCchhh
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVEV 154 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~v 154 (714)
...++|||+||++++++++++|++.+. ..|...+||.+. +...+.+++.+...+|+++++. .+
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~-------------~~g~i~d~~~~~~~ik~~~~~~--~~ 74 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL-------------MEGMVAEPAALAQEIKELLLEA--RT 74 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE-------------ETTEESCHHHHHHHHHHHHHHH--TC
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc-------------cCCCcCCHHHHHHHHHHHHHHc--CC
Confidence 456899999999999999887766552 234445555321 2234567888899999999761 00
Q ss_pred hhhhccceeEEEEcCCCcEEE-EeCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHH---------
Q 005099 155 DEESKQVSYRVVRDENGNVKL-ECPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQ--------- 224 (714)
Q Consensus 155 ~~~~~~~~~~v~~~~~g~~~v-~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~q--------- 224 (714)
..+.+ .+.-+...+.. .+. ...++++++... ++..++++++.++.++||++|. .+.+
T Consensus 75 --~~~~v---~~~i~~~~~~~~~~~--~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~ 141 (377)
T 2ych_A 75 --RKRYV---VTALSNLAVILRPIQ--VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQV 141 (377)
T ss_dssp --CCCEE---EEEECGGGCEEEEEE--EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEE
T ss_pred --CcceE---EEEecCCcEEEEEEE--CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCccee
Confidence 01111 11112222211 111 135778887653 3557888999999999999983 3333
Q ss_pred -----------HHHHHHHHHHcCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEEEEcCceEEEEEec
Q 005099 225 -----------RTATKDAGRIAGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTS 291 (714)
Q Consensus 225 -----------R~~l~~Aa~~AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~ 291 (714)
.+.+++|++.|||++..+++||+|||++|+... ..+..++|+|+||||||+++++.+... ..
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~-----~~ 216 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL-----AV 216 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE-----EE
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE-----EE
Confidence 388999999999999999999999999986542 235779999999999999999743222 24
Q ss_pred CCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCceeEEEecH
Q 005099 292 GDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTR 371 (714)
Q Consensus 292 gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~~~~~itr 371 (714)
++..+||++||+.|.+.+ +.+ ..+||++|+.++..............- ......++|
T Consensus 217 ~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~----~~~~~~i~~ 273 (377)
T 2ych_A 217 RVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDF----DAERERYSP 273 (377)
T ss_dssp EEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC----------------------------
T ss_pred EeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhccccccccccccccccc----ccccccCCH
Confidence 567999999999998732 222 468999999988643221110000000 113457899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcC----------------
Q 005099 372 VKFEELCSDLLDRLKTPVETSLRDA--KLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVT---------------- 433 (714)
Q Consensus 372 ~efe~l~~~l~~~i~~~i~~~L~~a--~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~---------------- 433 (714)
++|++++++.++++...|++.|+.. +.....++.|+|+||+|++|.|++.|++.|+.++...
T Consensus 274 ~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~ 353 (377)
T 2ych_A 274 GRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESE 353 (377)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHH
Confidence 9999999999999999999999963 5666789999999999999999999999998654332
Q ss_pred ----CCChhHHHhHHHHHHh
Q 005099 434 ----VNPDEVVALGAAVQAG 449 (714)
Q Consensus 434 ----~np~eaVA~GAa~~aa 449 (714)
.+|..++|+|+|+++.
T Consensus 354 ~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 354 QLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhHHHHHHHHHHHcCC
Confidence 1345667888888764
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=2.8e-26 Score=238.86 Aligned_cols=203 Identities=23% Similarity=0.359 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCCCCHHHHHHHHHHHHHcCCCeeEEechhHHHHHHcccccCCCceEEEE
Q 005099 187 EEISAQVLRKLVDDASKFLNDSVTKAVVTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVF 266 (714)
Q Consensus 187 eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVv 266 (714)
.+....+|+++++.++.+.+..+..+++|+|++|+..+|+.++++++.+|+++..++.||+|++++|+.. ..+|+
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-----~~~vi 144 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-----DGIVV 144 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-----SEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-----CEEEE
Confidence 4566788999999998888888899999999999999999999999999999999999999999999864 35999
Q ss_pred EeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCc
Q 005099 267 DLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLT 346 (714)
Q Consensus 267 D~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~ 346 (714)
|+||||++++++.. +.+. ......+||.+||+.|.+++.-. ...||++|+.++
T Consensus 145 DiGggst~~~~~~~--g~~~---~~~~~~~Gg~~~~~~l~~~l~~~-------------------~~~ae~~k~~~~--- 197 (272)
T 3h1q_A 145 DIGGGTTGIAVIEK--GKIT---ATFDEPTGGTHLSLVLAGSYKIP-------------------FEEAETIKKDFS--- 197 (272)
T ss_dssp EECSSCEEEEEEET--TEEE---EECCBSCCHHHHHHHHHHHHTCC-------------------HHHHHHHHHSST---
T ss_pred EECCCcEEEEEEEC--CEEE---EEecCCCcHHHHHHHHHHHhCCC-------------------HHHHHHHHHhcC---
Confidence 99999999999873 3321 24668999999999999887411 457899998865
Q ss_pred eeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc
Q 005099 347 QTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT 426 (714)
Q Consensus 347 ~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f 426 (714)
+++++++++.++++++.+.+.+.++..+ +++.|+|+||++++|.+++.|++.|
T Consensus 198 -----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 198 -----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp -----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred -----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 4789999999999999999999998753 4789999999999999999999999
Q ss_pred CCCCCcCCCChhHHHhHHHHHH
Q 005099 427 GREPNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 427 g~~~~~~~np~eaVA~GAa~~a 448 (714)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999999999999999999864
No 21
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.94 E-value=1.5e-26 Score=252.23 Aligned_cols=298 Identities=15% Similarity=0.166 Sum_probs=198.0
Q ss_pred eEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecC---------CCEEecHHHHHhhhhCCCchHHHHhHhh
Q 005099 77 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKN---------GDRLVGQIAKRQAVVNPENTFFSVKRFI 147 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~~i~~~Krll 147 (714)
..|+||+||+++++++..++.|.++ +||+|+.... ...++|+.|... +.. ..+
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~----~~~--~~~---- 67 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK----RGI--LTL---- 67 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHH----TTS--EEE----
T ss_pred ceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhc----Ccc--cce----
Confidence 5799999999999999876666543 4666665432 246788887543 100 000
Q ss_pred CCCchhhhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCCC--cCeEEEEecCCCCHHHH
Q 005099 148 GRKMVEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDS--VTKAVVTVPAYFNDSQR 225 (714)
Q Consensus 148 G~~~~~v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~~--v~~~VITVPa~f~~~qR 225 (714)
.+|+. +| .+.--+....+++++.. +.++.. ...++||+|++++..+|
T Consensus 68 ------------~~Pi~-----~G-----------~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r 116 (375)
T 2fxu_A 68 ------------KYPIE-----HG-----------IITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANR 116 (375)
T ss_dssp ------------ECSEE-----TT-----------EECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHH
T ss_pred ------------ecccc-----CC-----------cccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHH
Confidence 01111 11 11112334444555442 233332 24699999999999999
Q ss_pred HHHHHH-HHHcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHH
Q 005099 226 TATKDA-GRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR 304 (714)
Q Consensus 226 ~~l~~A-a~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~ 304 (714)
+++.++ .+.+|++.+.+++||+|||++|+. .+.||+|+|+||||++.+. +|. .+........+||++||+.
T Consensus 117 ~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-----~~~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~~GG~~lt~~ 188 (375)
T 2fxu_A 117 EKMTQIMFETFNVPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLDLAGRDLTDY 188 (375)
T ss_dssp HHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-----SSEEEEEECSSCEEEEEEE--TTE-ECGGGCEEESCCHHHHHHH
T ss_pred HHHHHHHHHhcCcceEEEccchheeeeecCC-----CeEEEEEcCCCceEEeEeE--CCE-EeccceEEeccCHHHHHHH
Confidence 988876 588899999999999999999986 3689999999999987764 443 2333345579999999999
Q ss_pred HHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCC----------------ceeeeeccccccCCCCCceeEEE
Q 005099 305 IVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSL----------------TQTNISLPFITATADGPKHIDTT 368 (714)
Q Consensus 305 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~----------------~~~~i~i~~~~~~~~g~~~~~~~ 368 (714)
|.++|..+. +......+ ...+|++|+.++.. ....+.+| ....++
T Consensus 189 l~~~l~~~~---~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---------dg~~i~ 249 (375)
T 2fxu_A 189 LMKILTERG---YSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---------DGQVIT 249 (375)
T ss_dssp HHHHHHHHT---CCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---------TSCEEE
T ss_pred HHHHHHhcC---CCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---------CCCEEE
Confidence 999998752 11111111 23455556555422 22233333 113578
Q ss_pred ecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CCCCCCCEEEEEcCCCCchhHHHHHHhhcC--------CCC
Q 005099 369 LTRVKF---EELCSDL-----LDRLKTPVETSLRDAK--LSFKDLDEVILVGGSTRIPAVQELVKKMTG--------REP 430 (714)
Q Consensus 369 itr~ef---e~l~~~l-----~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGGssrip~v~~~l~~~fg--------~~~ 430 (714)
|+++.| |.+++|. ...+.+.|.++|..+. +....++.|+|+||+|++|.+++.|++.++ .++
T Consensus 250 i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v 329 (375)
T 2fxu_A 250 IGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKI 329 (375)
T ss_dssp ESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCE
T ss_pred EChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEE
Confidence 888888 4445553 2457788888888652 223345789999999999999999998874 223
Q ss_pred CcCCCChhHHHhHHHHHHhH
Q 005099 431 NVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 431 ~~~~np~eaVA~GAa~~aa~ 450 (714)
....+|..++++||+++|..
T Consensus 330 ~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 330 IAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp ECCTTTTSHHHHHHHHHHHC
T ss_pred EcCCCCCccEEcchHHhhCc
Confidence 35679999999999999873
No 22
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=2.2e-26 Score=254.76 Aligned_cols=308 Identities=18% Similarity=0.183 Sum_probs=205.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecCC-----------------CEEecHHHHHhhhhCCC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNG-----------------DRLVGQIAKRQAVVNPE 137 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~-----------------~~~vG~~A~~~~~~~p~ 137 (714)
...+|+||+||+++++++..++.|.++ +||+|+..... ..++|+.|... |.
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~~ 71 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFI--------IPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----PT 71 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEE--------EESCEEECC-----------CCCTTGGGCEEEGGGGTSC----TT
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCc--------CCceEEEECcccccccccccccccccccCeEEChHHHhc----CC
Confidence 346899999999999998766666543 68888765431 24455544321 00
Q ss_pred chHHHHhHhhCCCchhhhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCC--CcCeEEEE
Q 005099 138 NTFFSVKRFIGRKMVEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLND--SVTKAVVT 215 (714)
Q Consensus 138 ~~i~~~KrllG~~~~~v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~--~v~~~VIT 215 (714)
..+..+-+...+.--+....+++++.. +.++. ....+|||
T Consensus 72 -----------------------------------~~~~~pi~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit 113 (418)
T 1k8k_A 72 -----------------------------------YATKWPIRHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLT 113 (418)
T ss_dssp -----------------------------------SEEECCEETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEE
T ss_pred -----------------------------------CEEeccccCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEE
Confidence 001111001111122333444554442 23332 23579999
Q ss_pred ecCCCCHHHHHHHHHHH-HHcCCCeeEEechhHHHHHH-cc---cccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEe
Q 005099 216 VPAYFNDSQRTATKDAG-RIAGLDVLRIINEPTAASLA-YG---FEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLST 290 (714)
Q Consensus 216 VPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAla-y~---~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~ 290 (714)
+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |. .... +.+.||||+|+||||++++. ++. .+...
T Consensus 114 ~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~-~~~glVvDiG~gtt~v~~v~--~G~-~~~~~ 189 (418)
T 1k8k_A 114 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER-TLTGTVIDSGDGVTHVIPVA--EGY-VIGSC 189 (418)
T ss_dssp ECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC-CCCEEEEEESSSCEEEEEEE--TTE-ECGGG
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC-CCeEEEEEcCCCceEEEEeE--CCE-Ecccc
Confidence 99999999999999999 88999999999999999988 42 2112 23779999999999999986 332 23333
Q ss_pred cCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCce-----------------eeeecc
Q 005099 291 SGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQ-----------------TNISLP 353 (714)
Q Consensus 291 ~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~-----------------~~i~i~ 353 (714)
.++..+||++||+.|.++|.+++. ......+ ...+|++|+.++.... ..+.+|
T Consensus 190 ~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lp 259 (418)
T 1k8k_A 190 IKHIPIAGRDITYFIQQLLRDREV---GIPPEQS-------LETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGI 259 (418)
T ss_dssp CEEESCSHHHHHHHHHHHHHTTCC---CCCGGGH-------HHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEE
T ss_pred eEEEeCcHHHHHHHHHHHHHhcCC---CCCCHHH-------HHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECC
Confidence 356799999999999999987653 1211111 3567888888764321 123333
Q ss_pred ccccCCCCCceeEEEecHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCCCCCCEEEEEcCCCCchhHHHHH
Q 005099 354 FITATADGPKHIDTTLTRVKF---EELCSDLL------DRLKTPVETSLRDAK--LSFKDLDEVILVGGSTRIPAVQELV 422 (714)
Q Consensus 354 ~~~~~~~g~~~~~~~itr~ef---e~l~~~l~------~~i~~~i~~~L~~a~--~~~~~i~~VvLvGGssrip~v~~~l 422 (714)
... ......++|++++| |.+++|.+ ..+.+.|.++|..+. +....++.|+|+||+|++|.+++.|
T Consensus 260 d~~----~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl 335 (418)
T 1k8k_A 260 NAI----SKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRL 335 (418)
T ss_dssp CTT----TCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHH
T ss_pred CCC----CCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHH
Confidence 221 12456789999999 55655542 468888999998764 3344567899999999999999999
Q ss_pred HhhcCCC------------------------CCcCCCChhHHHhHHHHHHhH
Q 005099 423 KKMTGRE------------------------PNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 423 ~~~fg~~------------------------~~~~~np~eaVA~GAa~~aa~ 450 (714)
++.++.. +..+.+|..++.+||+++|..
T Consensus 336 ~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 336 QRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 8766321 122346789999999999874
No 23
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=1.7e-25 Score=246.43 Aligned_cols=198 Identities=14% Similarity=0.131 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHH
Q 005099 223 SQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD 302 (714)
Q Consensus 223 ~qR~~l~~Aa~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D 302 (714)
...+.+.+|++.|||++..++.||+|||++|+.+...+..++|||+||||||+++++ ++.+.. .++..+||++||
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~it 242 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHVI 242 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHHH
Confidence 356789999999999999999999999999987655567899999999999999987 444322 345799999999
Q ss_pred HHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCC-----ceeeeeccccccCCCCCceeEEEecHHHHHHH
Q 005099 303 KRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSL-----TQTNISLPFITATADGPKHIDTTLTRVKFEEL 377 (714)
Q Consensus 303 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~-----~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l 377 (714)
+.|...+.-. ..+||++|+.++.. ....+.++... .....+++|++|+++
T Consensus 243 ~dIa~~l~~~-------------------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~------~~~~~~is~~~l~~i 297 (419)
T 4a2a_A 243 KDVSAVLDTS-------------------FEESERLIITHGNAVYNDLKEEEIQYRGLD------GNTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHTCC-------------------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT------SCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCC-------------------HHHHHHHHHHhccCcccCCCCceEEEeecC------CccceEEcHHHHHHH
Confidence 9998865322 56899999998753 23445555432 235679999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCC------CCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcC-----------------C
Q 005099 378 CSDLLDRLKTPVETSLRDAKL------SFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVT-----------------V 434 (714)
Q Consensus 378 ~~~l~~~i~~~i~~~L~~a~~------~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~-----------------~ 434 (714)
++|.++++.+.|++.|+.++. ....++.|+|+||+|++|.|++++++.|+.++... .
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccC
Confidence 999999999999999999987 34568999999999999999999999998754321 3
Q ss_pred CChhHHHhHHHHHHhH
Q 005099 435 NPDEVVALGAAVQAGV 450 (714)
Q Consensus 435 np~eaVA~GAa~~aa~ 450 (714)
+|..+.|.|.++++..
T Consensus 378 ~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CGGGHHHHHTTCC---
T ss_pred CchHHHHHHHHHHHhh
Confidence 8999999999998765
No 24
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.90 E-value=8e-24 Score=225.74 Aligned_cols=227 Identities=19% Similarity=0.218 Sum_probs=154.3
Q ss_pred CccccHHHHHHHHHHHHHHHHHhhcCCCcCeEEEEecCC-CCHH--HH--HHHHHH------------HHHcCCCeeEEe
Q 005099 181 GKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVTVPAY-FNDS--QR--TATKDA------------GRIAGLDVLRII 243 (714)
Q Consensus 181 ~~~~~~eev~a~~L~~l~~~a~~~~~~~v~~~VITVPa~-f~~~--qR--~~l~~A------------a~~AGl~~~~li 243 (714)
+..++++.+++.+ ..|++ +.. .+.++ .+|+++|.. |... || +++.+- ++.+++..+.++
T Consensus 71 ~~~~~~~~l~~i~-~aL~~-~~~-~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 146 (320)
T 2zgy_A 71 AWQYSDVNVVAVH-HALLT-SGL-PVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVM 146 (320)
T ss_dssp GGGGSHHHHHHHH-HHHHH-HSC-CSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEE
T ss_pred CccchHHHHHHHH-HHHHH-cCC-CCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEe
Confidence 4567888777654 55543 221 23333 699999987 6541 22 222221 234456778999
Q ss_pred chhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCchh
Q 005099 244 NEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLK 323 (714)
Q Consensus 244 ~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~ 323 (714)
+||.||+++|+.....+..++|+|+||||+|+++++ ++.+.+.+.+++.++||.+||+.|.+++.++ +.++.
T Consensus 147 ~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i~- 218 (320)
T 2zgy_A 147 PESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKGS- 218 (320)
T ss_dssp ESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGGG-
T ss_pred cCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCCC-
Confidence 999999999975544578999999999999999998 4455566667778999999999999998753 22322
Q ss_pred cHHHHHHHHHHHHHh-hhhcCC-CceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 005099 324 DKQALQRLTETAEKA-KMELSS-LTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFK 401 (714)
Q Consensus 324 ~~~~~~rL~~~~e~a-K~~Ls~-~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~ 401 (714)
...+|++ |..-.. .....+.+ .-+.+++.+++++.++++.+.|.+.+++. .
T Consensus 219 --------~~~ae~~lk~~~~~~~~~~~i~~---------------~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~ 271 (320)
T 2zgy_A 219 --------SYLADDIIIHRKDNNYLKQRIND---------------ENKISIVTEAMNEALRKLEQRVLNTLNEF----S 271 (320)
T ss_dssp --------HHHHHHHHHTTTCHHHHHHHSSS---------------SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----C
T ss_pred --------HHHHHHHHHHhhhhhcccceecC---------------chhhHHHHHHHHHHHHHHHHHHHHHHHhh----c
Confidence 1234444 332000 00000000 01345666667777777776666666652 5
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCC---CCCcCCCChhHHHhHHHHHH
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGR---EPNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~---~~~~~~np~eaVA~GAa~~a 448 (714)
+++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 272 ~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 272 GYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 78999999999998 99999999987 57778999999999999875
No 25
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.89 E-value=1.4e-23 Score=193.76 Aligned_cols=121 Identities=64% Similarity=0.962 Sum_probs=110.6
Q ss_pred CCCcEEEeeccCCcceeeeCCeeEEEEeCCCccCCCccceeeecccCCcceeeeeecccccccccCceeeEEEEeCCCCC
Q 005099 455 VSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPA 534 (714)
Q Consensus 455 ~~~~~~~dv~~~slgi~~~~~~~~~ii~~~~~iP~~~~~~f~~~~d~q~~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~ 534 (714)
++++.+.|++|++||+++.+|.|.+||+||++||++++++|++..|+|+.+.|.|||||+.++.+|..||+|.|.++||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEecCCceEEEEEEEcCCCceeeeEEccCCC
Q 005099 535 PRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGAST 575 (714)
Q Consensus 535 ~~g~~~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~~~~~ 575 (714)
|+|.++|+|+|++|.||+|+|++.|+.||++.+++|..+..
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~ 134 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCC
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCC
Confidence 99999999999999999999999999999999999987644
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.83 E-value=1e-21 Score=215.26 Aligned_cols=214 Identities=18% Similarity=0.198 Sum_probs=91.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHH-HHcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEE
Q 005099 210 TKAVVTVPAYFNDSQRTATKDAG-RIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVL 288 (714)
Q Consensus 210 ~~~VITVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl 288 (714)
..++||+|++++..+|+++.+++ +.+|++.+.+++||.||+++++. .+.+|+|+|+|||+++.+. +|.. +.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-----~~~lVVDiG~g~T~v~pv~--~G~~-~~ 176 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-----LTGVVVDSGDGVTHICPVY--EGFS-LP 176 (394)
T ss_dssp ------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-CS
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-----ceEEEEEcCCCceEeeeeE--CCEE-cc
Confidence 36999999999999999988864 77899999999999999999886 3569999999999998775 3332 12
Q ss_pred EecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCce----------------eeeec
Q 005099 289 STSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQ----------------TNISL 352 (714)
Q Consensus 289 ~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~----------------~~i~i 352 (714)
.......+||+++|+.|.++|..+. +......+ ...+|++|+.++.... ..+.+
T Consensus 177 ~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~l 246 (394)
T 1k8k_B 177 HLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTL 246 (394)
T ss_dssp TTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEEC
T ss_pred cceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEEC
Confidence 1223468999999999999998752 11110111 3456777776654321 11222
Q ss_pred cccccCCCCCceeEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCEEEEEcCCCCchhHHHHH
Q 005099 353 PFITATADGPKHIDTTLTRVKFE---ELCSDL-----LDRLKTPVETSLRDAKLS--FKDLDEVILVGGSTRIPAVQELV 422 (714)
Q Consensus 353 ~~~~~~~~g~~~~~~~itr~efe---~l~~~l-----~~~i~~~i~~~L~~a~~~--~~~i~~VvLvGGssrip~v~~~l 422 (714)
| ....++|+++.|+ -+++|- ...+.+.|.+.|..+..+ ..-.+.|+|+||+|++|.+.+.|
T Consensus 247 p---------dg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl 317 (394)
T 1k8k_B 247 P---------DGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRL 317 (394)
T ss_dssp T---------TSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHH
T ss_pred C---------CCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHH
Confidence 2 1135778888773 233332 234778888888876422 22346899999999999999999
Q ss_pred HhhcCC-----------------CCC--cCCCChhHHHhHHHHHHhH
Q 005099 423 KKMTGR-----------------EPN--VTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 423 ~~~fg~-----------------~~~--~~~np~eaVA~GAa~~aa~ 450 (714)
++.++. ++. .+.+|..++.+|++++|..
T Consensus 318 ~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 318 ERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 887742 222 2456789999999998864
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.79 E-value=8.3e-20 Score=190.44 Aligned_cols=217 Identities=20% Similarity=0.213 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcCeE-EEEecCCCCHHHHHHHHHHHHHcCCCeeEEechhHHHHHHcccccCCCceEEEE
Q 005099 188 EISAQVLRKLVDDASKFLNDSVTKA-VVTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVF 266 (714)
Q Consensus 188 ev~a~~L~~l~~~a~~~~~~~v~~~-VITVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVv 266 (714)
++.+.+|+.+++.+.... .++ .+++..+ ...++...+..|+||+|+++++..... ....|+
T Consensus 37 e~a~~vl~~~~~~a~~~~----~~~~~~a~t~~------------~~~a~~~~~~~Vne~~aha~a~~~~~~--~~~~vl 98 (276)
T 4ehu_A 37 TGPSRVLEKLYGKTGLAR----EDIKKVVVTGY------------GRMNYSDADKQISELSCHARGVNFIIP--ETRTII 98 (276)
T ss_dssp SHHHHHHHHHHHHHCCCG----GGEEEEEEEST------------TGGGCCSCSEECCHHHHHHHHHHHHST--TCCEEE
T ss_pred HHHHHHHHHHHHHCCCcc----hhccccccCch------------HHHHhhCCCcccchHHHHHHHHHHhCC--CCCeEE
Confidence 456667777777664322 222 2222222 124677788999999999988866543 345789
Q ss_pred EeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhh--hcCC
Q 005099 267 DLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKM--ELSS 344 (714)
Q Consensus 267 D~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~--~Ls~ 344 (714)
|+|||+++++++. .++.+++....++...|+.+|+..+.++|...|.... ..+.+++. .+++
T Consensus 99 ~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~---------------~~~~~a~~~~~i~~ 162 (276)
T 4ehu_A 99 DIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELG---------------SISMNSQNEVSISS 162 (276)
T ss_dssp EECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHH---------------HHHTTCSSCCCCCC
T ss_pred EEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhhH---------------HHHhcCCCCCCcCC
Confidence 9999999999885 5678888888888999999999999999876554211 00111111 1111
Q ss_pred CceeeeeccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHh
Q 005099 345 LTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKK 424 (714)
Q Consensus 345 ~~~~~i~i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~ 424 (714)
....-..-+... ..-.....++++..+.+.+.+.+....... ..++.|+|+||.+++|.|++.|++
T Consensus 163 ~~~~f~~s~~~~----------~~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~ 228 (276)
T 4ehu_A 163 TCTVFAESEVIS----------HLSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAR 228 (276)
T ss_dssp CSHHHHHHHHHH----------HHHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHH
T ss_pred ccchhhhhHHHH----------hhhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHH
Confidence 100000000000 000011234566666666665555544443 456789999999999999999999
Q ss_pred hcCCCCCcCCCChhHHHhHHHHHHhHhh
Q 005099 425 MTGREPNVTVNPDEVVALGAAVQAGVLA 452 (714)
Q Consensus 425 ~fg~~~~~~~np~eaVA~GAa~~aa~ls 452 (714)
.||.++..+.||++++|+|||++|....
T Consensus 229 ~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 229 EINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999997543
No 28
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.73 E-value=5.8e-17 Score=174.54 Aligned_cols=204 Identities=16% Similarity=0.214 Sum_probs=141.4
Q ss_pred eEEEEecCCCCHHHH-HHHHHHHHHcCC------------CeeEEechhHHHHHHcccccC------CCceEEEEEeCCc
Q 005099 211 KAVVTVPAYFNDSQR-TATKDAGRIAGL------------DVLRIINEPTAASLAYGFEKK------NNETILVFDLGGG 271 (714)
Q Consensus 211 ~~VITVPa~f~~~qR-~~l~~Aa~~AGl------------~~~~li~Ep~AAAlay~~~~~------~~~~vLVvD~GgG 271 (714)
.+++.+|..+...+| +++++++..++- ..+.+++||.||+++++.+.. .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 789999999998887 589998875543 457899999999999986531 3688999999999
Q ss_pred ceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeee
Q 005099 272 TFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNIS 351 (714)
Q Consensus 272 T~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~ 351 (714)
|+|++++. ++.+ +...++...+||..+++.+.+++.+++. +..+. . ...++-+. +..
T Consensus 195 Ttd~~v~~--~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~~~------- 251 (355)
T 3js6_A 195 TTIIDTYQ--NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-YKQ------- 251 (355)
T ss_dssp CEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-----------
T ss_pred cEEEEEEc--CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-ccc-------
Confidence 99999983 4332 1112334679999999999999887642 22221 1 11111111 000
Q ss_pred ccccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchh--HHHHHHhhcCCC
Q 005099 352 LPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPA--VQELVKKMTGRE 429 (714)
Q Consensus 352 i~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~--v~~~l~~~fg~~ 429 (714)
...+ ..-.+.+ .+.+++.++++++++.+.|++.+.+ ++.++.|+|+||++.++. |++.|++.|+..
T Consensus 252 -----~~~~--~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~ 319 (355)
T 3js6_A 252 -----CKLN--QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA 319 (355)
T ss_dssp -----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC
T ss_pred -----cccc--ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC
Confidence 0000 0001112 3457778888888888888888864 356799999999999998 999999988442
Q ss_pred CCcCCCChhHHHhHHHHHHhHhhC
Q 005099 430 PNVTVNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 430 ~~~~~np~eaVA~GAa~~aa~ls~ 453 (714)
.||..|+|.|+..++..+.+
T Consensus 320 ----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887653
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.64 E-value=2.1e-16 Score=168.64 Aligned_cols=203 Identities=20% Similarity=0.188 Sum_probs=143.5
Q ss_pred CeEEEEecCCCCH--HHHHHHHHHHHHc--------C------CCeeEEechhHHHHHHcccccCCCceEEEEEeCCcce
Q 005099 210 TKAVVTVPAYFND--SQRTATKDAGRIA--------G------LDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 273 (714)
Q Consensus 210 ~~~VITVPa~f~~--~qR~~l~~Aa~~A--------G------l~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~ 273 (714)
..+|+++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. ....+..++|+|+||||+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~~~~~~~v~vvDiGggTt 184 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-ENFKNKNVAVIDFGGLNM 184 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-CCCTTCEEEEEEECSSCE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-hhhccCCEEEEEeCCCcE
Confidence 3789999998774 3687887776621 2 134678999999888763 222468999999999999
Q ss_pred EEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHh-ccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeec
Q 005099 274 DVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAS-NFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISL 352 (714)
Q Consensus 274 Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~-~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i 352 (714)
|++++. ++.+ +...++...+||.++++.|.+++.. ++.. .+.. ..+|++|+. .. ..
T Consensus 185 d~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~----~i~~---------~~~e~i~~~-g~---~~--- 241 (329)
T 4apw_A 185 GFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLNNGN----LITN---------EQAESALNN-GY---MK--- 241 (329)
T ss_dssp EEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCS----CTTS---------BTTTTCSSS-CS---SC---
T ss_pred EEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhccCC----CCCH---------HHHHHHHhc-CC---cc---
Confidence 999998 3333 2223345789999999999988776 5442 2221 134455543 11 00
Q ss_pred cccccCCCCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCc
Q 005099 353 PFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNV 432 (714)
Q Consensus 353 ~~~~~~~~g~~~~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~ 432 (714)
. + .++ ..++.+++++.++++++++.+.+++. +.+++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 242 --~--g----~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 242 --K--G----GEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp --E--E----CTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred --c--C----Ccc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 0 011 13456778888888888887777766 2455668999999999998 569999999877778
Q ss_pred CCCChhHHHhHHHHHHhHh
Q 005099 433 TVNPDEVVALGAAVQAGVL 451 (714)
Q Consensus 433 ~~np~eaVA~GAa~~aa~l 451 (714)
..||..|+|+|+..++...
T Consensus 307 ~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhh
Confidence 8899999999999887653
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.8e-14 Score=158.87 Aligned_cols=179 Identities=17% Similarity=0.175 Sum_probs=124.1
Q ss_pred eEEEEEcCccceEEEEEECCeeEEEeCCCCCccceEEEEEecC---CCEEecHHHHHhhhhCCCchHHHHhHhhCCCchh
Q 005099 77 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKN---GDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMVE 153 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---~~~~vG~~A~~~~~~~p~~~i~~~KrllG~~~~~ 153 (714)
..|+||+||.++++++..++.|.++ +||+|+.... ...+||..+... .
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~---~------------------ 74 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGI---P------------------ 74 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGS---C------------------
T ss_pred CeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhc---C------------------
Confidence 4789999999999998766666555 6999998653 246677753111 0
Q ss_pred hhhhhccceeEEEEcCCCcEEEEeCCCCccccHHHHHHHHHHHHHHHHHhhcCC--CcC-eEEEEecCCCCHHHHHHHHH
Q 005099 154 VDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLND--SVT-KAVVTVPAYFNDSQRTATKD 230 (714)
Q Consensus 154 v~~~~~~~~~~v~~~~~g~~~v~~~~~~~~~~~eev~a~~L~~l~~~a~~~~~~--~v~-~~VITVPa~f~~~qR~~l~~ 230 (714)
.+.+.+..+-+...+.--+....+++|+... .++. .-. .++||.|.......|+.+.+
T Consensus 75 ----------------r~~l~l~~Pi~~GvI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~e 135 (498)
T 3qb0_A 75 ----------------RKDYELKPIIENGLVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLE 135 (498)
T ss_dssp ----------------CTTEEEEESEETTEESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHH
T ss_pred ----------------cCceEEeccCcCCEEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHH
Confidence 0112222222222333445666666666543 2322 123 68999999999999999988
Q ss_pred HH-HHcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHH
Q 005099 231 AG-RIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWL 309 (714)
Q Consensus 231 Aa-~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l 309 (714)
.+ +.+|+.-+.++.+|.+|+++++.. +-||+|+|+|+++++.+. +|.. +........+||+++|+.|.++|
T Consensus 136 ilFE~f~vpav~l~~~~vlalya~G~~-----tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L~~lL 207 (498)
T 3qb0_A 136 VLLEGMQFEACYLAPTSTCVSFAAGRP-----NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLIKKAL 207 (498)
T ss_dssp HHHTTSCCSEEEEEEHHHHHHHHHTCS-----SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHHHHHT
T ss_pred HHHhhcCCCeEeecchHHHHHHHcCCC-----eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHHHHHH
Confidence 65 789999999999999999999863 349999999999999885 3321 11111125799999999999999
Q ss_pred Hh
Q 005099 310 AS 311 (714)
Q Consensus 310 ~~ 311 (714)
..
T Consensus 208 ~~ 209 (498)
T 3qb0_A 208 EP 209 (498)
T ss_dssp TT
T ss_pred Hh
Confidence 75
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.55 E-value=4.6e-15 Score=163.38 Aligned_cols=244 Identities=17% Similarity=0.111 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC--cCeEEEEecCCCCHHHHHHHHHHH-HHcCCCeeEEechhHHHHHHcccccC--C-C
Q 005099 187 EEISAQVLRKLVDDASKFLNDS--VTKAVVTVPAYFNDSQRTATKDAG-RIAGLDVLRIINEPTAASLAYGFEKK--N-N 260 (714)
Q Consensus 187 eev~a~~L~~l~~~a~~~~~~~--v~~~VITVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAlay~~~~~--~-~ 260 (714)
-+....+++|+.. +.++.. -..+++|.|......+|+.+.+.+ +..|++-+.++.+|.+|+++.+.... . .
T Consensus 102 wd~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~ 178 (427)
T 3dwl_A 102 WDHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRS 178 (427)
T ss_dssp HHHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCC
T ss_pred HHHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCC
Confidence 3455555555543 233322 247999999999999999998887 78999999999999999999885421 1 3
Q ss_pred ceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhh
Q 005099 261 ETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKM 340 (714)
Q Consensus 261 ~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~ 340 (714)
.+-||+|+|+|+|+++.+. ++..+ ........+||+++|+.|.++|..+..... =.+.+|.+|+
T Consensus 179 ~tglVVDiG~g~T~v~PV~-~G~~l--~~~~~rl~~gG~~lt~~L~~lL~~~~~~~~-------------~~~~~~~IKe 242 (427)
T 3dwl_A 179 LTGTVVDSGDGVTHIIPVA-EGYVI--GSSIKTMPLAGRDVTYFVQSLLRDRNEPDS-------------SLKTAERIKE 242 (427)
T ss_dssp CCEEEEEESSSCEEEEEEE-TTEEC--GGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHH
T ss_pred ceEEEEECCCCceEEEEEE-CCEEe--hhhheeccccHHHHHHHHHHHHHHcCCCch-------------hHHHHHHHHH
Confidence 5689999999999999884 22111 111112479999999999998876543200 0245677777
Q ss_pred hcCCCcee---ee--------ecccc-ccCCCCCceeEEEecHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCC
Q 005099 341 ELSSLTQT---NI--------SLPFI-TATADGPKHIDTTLTRVKFE---ELCSDL------LDRLKTPVETSLRDAKLS 399 (714)
Q Consensus 341 ~Ls~~~~~---~i--------~i~~~-~~~~~g~~~~~~~itr~efe---~l~~~l------~~~i~~~i~~~L~~a~~~ 399 (714)
.++..... ++ .+... ....+| ....++|..+.|. -+++|- ...|.+.|.+.|.++..+
T Consensus 243 ~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g-~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~d 321 (427)
T 3dwl_A 243 ECCYVCPDIVKEFSRFDREPDRYLKYASESITG-HSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPID 321 (427)
T ss_dssp HHCCCCSCHHHHHHHTTC-----CCBCC----------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHH
T ss_pred hcCcccCCHHHHHHHhhcCccccceeEeeCCCC-CeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHH
Confidence 76643210 00 00000 000011 2235667777663 344441 234777888888764321
Q ss_pred --CCCCCEEEEEcCCCCchhHHHHHHhhcC----------------------CCCCcCCCChhHHHhHHHHHHhH
Q 005099 400 --FKDLDEVILVGGSTRIPAVQELVKKMTG----------------------REPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 400 --~~~i~~VvLvGGssrip~v~~~l~~~fg----------------------~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
+.-...|+|+||+|.+|.+.+.|.+.+. .++..+.++..++=+|++++|..
T Consensus 322 lr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl 396 (427)
T 3dwl_A 322 VRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQT 396 (427)
T ss_dssp HHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHS
T ss_pred HHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccc
Confidence 1112569999999999999999887541 11222346678999999999863
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.55 E-value=1.7e-14 Score=129.11 Aligned_cols=106 Identities=18% Similarity=0.260 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHH
Q 005099 597 EKRDAIDTKNQADSVVYQTEKQLKE--LGDKVPAEVKGKVEGKLKELKDAIAEG---STQAMKDTMAALNQEVMQLGQSL 671 (714)
Q Consensus 597 ~~~~~~~~~n~lE~~i~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~i~~~~ 671 (714)
++|+++++||+||+|||++++.|.+ +.++++++++++|...|+++++||+.+ +.++|+.++++|++.+.+|..++
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999987 889999999999999999999999975 49999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCeee
Q 005099 672 YNQPGAGAAPGAGPTPGAEAGASDSSNKGQDGDVID 707 (714)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
|+++|++ + +||.||+.++ .+++.||.+|++|
T Consensus 83 y~~~~~~-~--~~~~~~~~~~--~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGP-G--PGGFGAQGPK--GGSGSGPTIEEVD 113 (113)
T ss_dssp HHC---------------------------------
T ss_pred HHhccCC-C--CCCCCCCCCC--CCCCCCCCCCCCC
Confidence 9864321 1 1121221111 1234567777765
No 33
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.48 E-value=5e-14 Score=126.09 Aligned_cols=80 Identities=15% Similarity=0.225 Sum_probs=70.1
Q ss_pred HHHHHHhhhhHHHHHHHHHH--HhccCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 005099 601 AIDTKNQADSVVYQTEKQLK--ELGDKVPAEVKGKVEGKLKELKDAIAEG---STQAMKDTMAALNQEVMQLGQSLYNQP 675 (714)
Q Consensus 601 ~~~~~n~lE~~i~~~~~~l~--~~~~~~~~~~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~i~~~~~~~~ 675 (714)
++++||+||+|||.+++.|. ++.++++++++++|...|+++++||+++ +.++|++++++|++.+.+|..++|..+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999998 5888999999999999999999999854 789999999999999999999999754
Q ss_pred CCCCC
Q 005099 676 GAGAA 680 (714)
Q Consensus 676 ~~~~~ 680 (714)
++.++
T Consensus 82 ~~~~~ 86 (113)
T 1ud0_A 82 GGMPG 86 (113)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 44443
No 34
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.42 E-value=1.5e-13 Score=124.22 Aligned_cols=79 Identities=18% Similarity=0.262 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHh
Q 005099 598 KRDAIDTKNQADSVVYQTEKQLKE--LGDKVPAEVKGKVEGKLKELKDAIAEG---STQAMKDTMAALNQEVMQLGQSLY 672 (714)
Q Consensus 598 ~~~~~~~~n~lE~~i~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~i~~~~~ 672 (714)
+|+++++||+||+|||.+++.|.+ +.++++++++++|...|+++++||+++ +.++|+.++++|++.+.+|..++|
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999999987 888999999999999999999999965 899999999999999999999999
Q ss_pred cCCC
Q 005099 673 NQPG 676 (714)
Q Consensus 673 ~~~~ 676 (714)
+.++
T Consensus 93 ~~~~ 96 (120)
T 2p32_A 93 QSAG 96 (120)
T ss_dssp CC--
T ss_pred Hhcc
Confidence 6433
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.29 E-value=3.3e-10 Score=130.50 Aligned_cols=118 Identities=17% Similarity=0.251 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHH-hhcCCCcC-----eEEEEecCCCCHHHHHHHHHH-HHHcCCCeeEEechhHHHHHHcccccC
Q 005099 186 AEEISAQVLRKLVDDAS-KFLNDSVT-----KAVVTVPAYFNDSQRTATKDA-GRIAGLDVLRIINEPTAASLAYGFEKK 258 (714)
Q Consensus 186 ~eev~a~~L~~l~~~a~-~~~~~~v~-----~~VITVPa~f~~~qR~~l~~A-a~~AGl~~~~li~Ep~AAAlay~~~~~ 258 (714)
..+...+ +..|++++- +.++.... .+++|.|..++...|+.|-+. .+..|+.-+.++.++.+|+++++..
T Consensus 170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 3444444 344555543 45665433 499999999999999988765 5667999999999999999999864
Q ss_pred CCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHHHHHHHHHHhc
Q 005099 259 NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASN 312 (714)
Q Consensus 259 ~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D~~l~~~l~~~ 312 (714)
+-||||+|.+.|.|+-+.- |.. +........+||+++++.|.++|..+
T Consensus 247 ---tglVVDiG~~~T~v~PV~d--G~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 ---STCIVDVGDQKTSVCCVED--GVS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp ---EEEEEEECSSCEEEEEEES--SCB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred ---ceEEEEeCCCceeeeeeEC--CEE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 5699999999998877652 211 11111124799999999999998765
No 36
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.28 E-value=2.3e-12 Score=140.20 Aligned_cols=199 Identities=20% Similarity=0.187 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHc-CC--CeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCCh
Q 005099 222 DSQRTATKDAGRIA-GL--DVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGG 298 (714)
Q Consensus 222 ~~qR~~l~~Aa~~A-Gl--~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG 298 (714)
..+-+.+.+|.+.+ |+ ++-. .||.||+++.+.+...+..+.++||||||||++++.-+.-.+ ......||
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~gG 439 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGAG 439 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECSH
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccch
Confidence 44577889999999 99 6666 999999999999888889999999999999999997555444 23367999
Q ss_pred hHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCce----------eeeec--cccccCCCCCc---
Q 005099 299 DDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQ----------TNISL--PFITATADGPK--- 363 (714)
Q Consensus 299 ~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~----------~~i~i--~~~~~~~~g~~--- 363 (714)
++++..|..-|.-. | +..||++|+ ...... ..+.+ +.+....- ..
T Consensus 440 ~~VT~DIA~~Lgt~-------d-----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~-~Rv~~ 499 (610)
T 2d0o_A 440 DMVTMIIARELGLE-------D-----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVF-ARVCV 499 (610)
T ss_dssp HHHHHHHHHHHTCC-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGT-TCEEE
T ss_pred HHHHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCccee-eeeec
Confidence 99999998776433 0 357999998 543211 12333 22211100 01
Q ss_pred ---eeEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCCEEEEEcCCCCchhHHHHHHhhcCC-CC
Q 005099 364 ---HIDTTLTRVK--FEELCSDLLDRLKTP--VETSLRDAKL-----SFKDLDEVILVGGSTRIPAVQELVKKMTGR-EP 430 (714)
Q Consensus 364 ---~~~~~itr~e--fe~l~~~l~~~i~~~--i~~~L~~a~~-----~~~~i~~VvLvGGssrip~v~~~l~~~fg~-~~ 430 (714)
..-..| +.. +|+ ++-+-+++.+. +.++|+..+. ...+|..|+|+||+|.++.+.++..+.|+. ++
T Consensus 500 ~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 500 VKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp ECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred ccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 112355 566 776 55555554444 3444655432 245679999999999999999999999977 44
Q ss_pred C-------cCCCChhHHHhHHHHHHh
Q 005099 431 N-------VTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 431 ~-------~~~np~eaVA~GAa~~aa 449 (714)
. ..-.|..|+|.|.+++.+
T Consensus 578 RiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 578 VAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp EEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred EEecCCccccCCCcHHHHHHHHHHHh
Confidence 2 234899999999998754
No 37
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.25 E-value=3.5e-12 Score=139.35 Aligned_cols=196 Identities=18% Similarity=0.137 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHc-CC--CeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhH
Q 005099 224 QRTATKDAGRIA-GL--DVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDD 300 (714)
Q Consensus 224 qR~~l~~Aa~~A-Gl--~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d 300 (714)
+-+.+.+|.+.+ |+ ++-. .||.||+++.+.+...+..+.++||||||||++++.-+.-.+ ......||++
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~~ 443 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGNM 443 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHHH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchHH
Confidence 456688888888 99 6555 999999999999888889999999999999999997655444 2336799999
Q ss_pred HHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCce----------eeeec--cccccCCCCCc-----
Q 005099 301 FDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQ----------TNISL--PFITATADGPK----- 363 (714)
Q Consensus 301 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~----------~~i~i--~~~~~~~~g~~----- 363 (714)
++..|..-|.-. | +..||++|+ ...... ..+.+ +.+....- ..
T Consensus 444 VT~DIA~~Lg~~-------d-----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~-~R~~~~~ 503 (607)
T 1nbw_A 444 VSLLIKTELGLE-------D-----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVF-AKVVYIK 503 (607)
T ss_dssp HHHHHHHHHTCS-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGT-TCEEEEE
T ss_pred HHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCccee-eeeeccc
Confidence 999998776433 0 357999998 543211 12333 22211100 01
Q ss_pred -eeEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCCCEEEEEcCCCCchhHHHHHHhhcCC-CCC-
Q 005099 364 -HIDTTLTRVK--FEELCSDLLDRLKTP--VETSLRDAKLS-----FKDLDEVILVGGSTRIPAVQELVKKMTGR-EPN- 431 (714)
Q Consensus 364 -~~~~~itr~e--fe~l~~~l~~~i~~~--i~~~L~~a~~~-----~~~i~~VvLvGGssrip~v~~~l~~~fg~-~~~- 431 (714)
..-..| +.. +|+ ++-+-+++.+. +.++|+..+.. ..+|..|+|+||+|.++.+.++..+.|+. ++.
T Consensus 504 ~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 504 EGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred ccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 112355 555 666 55555555444 45568876643 34679999999999999999999999966 432
Q ss_pred ------cCCCChhHHHhHHHHHH
Q 005099 432 ------VTVNPDEVVALGAAVQA 448 (714)
Q Consensus 432 ------~~~np~eaVA~GAa~~a 448 (714)
..-.|..|+|.|.+++.
T Consensus 582 GrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 582 GQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp EECCGGGTSCSCCHHHHHHHHHH
T ss_pred ecCCccccCCchHHHHHHHHHhh
Confidence 23489999999999764
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.76 E-value=3.8e-07 Score=94.09 Aligned_cols=73 Identities=18% Similarity=0.173 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHh
Q 005099 375 EELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVL 451 (714)
Q Consensus 375 e~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~l 451 (714)
++++..+++.+...+.+.++..++ .+.|+++||.++.|.+++.+.+.++.++..+.+|+.+.|+|||++|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 344445555555555455543221 3679999999999999999999999988888888889999999998763
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.15 E-value=1.8e-05 Score=89.15 Aligned_cols=127 Identities=17% Similarity=0.232 Sum_probs=91.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHH-HHcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCceEEEE
Q 005099 210 TKAVVTVPAYFNDSQRTATKDAG-RIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVL 288 (714)
Q Consensus 210 ~~~VITVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl 288 (714)
..+++|.|..+....|+.|.+.+ +..|+.-+.++.+|.+|+++++. ..+-||+|+|+|+|+++.+. +|.. +.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl----~ttGLVVDiG~g~T~VvPV~--eG~v-l~ 294 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI----STSTCVVNIGAAETRIACVD--EGTV-LE 294 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC----SSCEEEEEECSSCEEEEEEE--TTEE-CG
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC----CCceEEEcCCCceEEEEEEe--CCEE-Eh
Confidence 47999999999999999998877 56899999999999999999875 24569999999999999874 2211 11
Q ss_pred EecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCcee
Q 005099 289 STSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQT 348 (714)
Q Consensus 289 ~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~ 348 (714)
.......+||+++|+.|.++|..+--.....++.. .. =...++.+|+.++.....
T Consensus 295 ~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t--~~---e~eiVrdIKEk~CyVs~~ 349 (655)
T 4am6_A 295 HSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDS--KH---GWLLAERLKKNFTTFQDA 349 (655)
T ss_dssp GGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTS--HH---HHHHHHHHHHHHCCCCGG
T ss_pred hheeeecchHHHHHHHHHHHHHHcCCCccccCCCC--cc---hHHHHHHHHHheEEEccc
Confidence 11112589999999999999987621000111111 11 145678899998876433
No 40
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.20 E-value=0.0055 Score=63.06 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=40.9
Q ss_pred CCEEEEEcC-CCCchhHHHHHHhhc---CCCCCcCCCChhHHHhHHHHHH
Q 005099 403 LDEVILVGG-STRIPAVQELVKKMT---GREPNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 403 i~~VvLvGG-ssrip~v~~~l~~~f---g~~~~~~~np~eaVA~GAa~~a 448 (714)
++.|+++|| .+..|.+++.|.+++ +.++..+.+|..+.|+|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 557999999 899999999999974 6778889999999999999874
No 41
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.03 E-value=0.0067 Score=64.21 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHcCCCCCCCCEEEEEcC-CCCchhHHHHHHhhcC------CCCCcCCCChhHHHhH
Q 005099 375 EELCSDLLDRLKTPVETSL----RDAKLSFKDLDEVILVGG-STRIPAVQELVKKMTG------REPNVTVNPDEVVALG 443 (714)
Q Consensus 375 e~l~~~l~~~i~~~i~~~L----~~a~~~~~~i~~VvLvGG-ssrip~v~~~l~~~fg------~~~~~~~np~eaVA~G 443 (714)
|+++..++..+.+.|-... +..+ ++.|+++|| .+..|.+++.|.+.++ .++..+.+|..+-|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4555555555555544432 3433 446999999 8999999999999863 5677788999999999
Q ss_pred HHHHH
Q 005099 444 AAVQA 448 (714)
Q Consensus 444 Aa~~a 448 (714)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 42
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.66 E-value=0.82 Score=47.84 Aligned_cols=63 Identities=24% Similarity=0.240 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc---CCCCCcCC---CChhHHHhHHHHHHhH
Q 005099 383 DRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT---GREPNVTV---NPDEVVALGAAVQAGV 450 (714)
Q Consensus 383 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f---g~~~~~~~---np~eaVA~GAa~~aa~ 450 (714)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. --|.++++|+|.+...
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 344444455555433 568999999999999999999877 44444433 2367889998876543
No 43
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.29 E-value=0.38 Score=50.55 Aligned_cols=68 Identities=21% Similarity=0.263 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc---CCCCCcCC---CChhHHHhHHHHHHhHhhC
Q 005099 381 LLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT---GREPNVTV---NPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 381 l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f---g~~~~~~~---np~eaVA~GAa~~aa~ls~ 453 (714)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34455556666666644 578999999999999999999887 55544433 3488999999876554444
No 44
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.05 E-value=0.71 Score=47.99 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=30.2
Q ss_pred cCCCeeEEechhHHHHHHcccc--cCCCceEEEEEeCCcceEEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFE--KKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~--~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
.|++ +.+.|+..|+|++.... .+...+++++-+|.| +-..++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 3776 58999999999975433 123467888889988 5555553
No 45
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.04 E-value=0.85 Score=47.57 Aligned_cols=47 Identities=23% Similarity=0.121 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCC---------CCcCCCChhHHHhHHHHHH
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGRE---------PNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~---------~~~~~np~eaVA~GAa~~a 448 (714)
+++.|+|-||.+..+.+.+.|++.+... +....-.+.+.++|||..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 3578999999988877777777665321 1122245789999999765
No 46
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.00 E-value=1.7 Score=44.48 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcC-CCCCcCCCChhHHHhHHHHHHhH
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTG-REPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg-~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
+++.|+|.||.+..+.+.+.|++.+. .++..+. .+.+.++||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45689999998877888888887773 3454455 668899999988754
No 47
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.93 E-value=0.013 Score=66.26 Aligned_cols=85 Identities=19% Similarity=0.183 Sum_probs=62.4
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHH
Q 005099 369 LTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 369 itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~a 448 (714)
-+|.++-.++.-+++.+.-.++..++...-....++.|.++||.++.+.+.+.+.+.||.++.... ..|+.|+|||+.|
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~-~~e~~alGAA~lA 487 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPE-ESEAMLLGSAMMG 487 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEES-CSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEecC-CCcchHHHHHHHH
Confidence 378887554556666665555554443221224578999999999999999999999999876654 4679999999999
Q ss_pred hHhhCC
Q 005099 449 GVLAGD 454 (714)
Q Consensus 449 a~ls~~ 454 (714)
+.-.+.
T Consensus 488 ~~a~G~ 493 (554)
T 3l0q_A 488 TVAAGV 493 (554)
T ss_dssp HHHTTS
T ss_pred HHHcCC
Confidence 875553
No 48
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.87 E-value=0.011 Score=65.64 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
+++-+++.+.-.++.+++........++.|.++||.++.+.+.+.+.+.+|.++.....++.+.|+|||+.|+.-.+.
T Consensus 361 ~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 361 LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 344555555444444444332122356789999999999999999999999988877666656999999999875553
No 49
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.78 E-value=0.28 Score=51.01 Aligned_cols=42 Identities=21% Similarity=0.453 Sum_probs=29.3
Q ss_pred cCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|+|++..... ....+++++-+|.| +-..++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 3666 589999999998753321 23467888889988 455554
No 50
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.77 E-value=0.015 Score=65.25 Aligned_cols=80 Identities=18% Similarity=0.073 Sum_probs=58.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHh
Q 005099 370 TRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 370 tr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa 449 (714)
+|.+| ++-+++.+.-.++..++...- .. ++.|.++||.++.+.+.+.+.+.||.++.....+.|+.|+|||+.|+
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~ 449 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAA 449 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHH
Confidence 45444 455555555555555544322 23 78999999999999999999999999872334588999999999998
Q ss_pred HhhCC
Q 005099 450 VLAGD 454 (714)
Q Consensus 450 ~ls~~ 454 (714)
.-.+.
T Consensus 450 ~a~G~ 454 (511)
T 3hz6_A 450 VELEW 454 (511)
T ss_dssp HHTTS
T ss_pred HHhCC
Confidence 76554
No 51
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.75 E-value=0.017 Score=64.56 Aligned_cols=77 Identities=21% Similarity=0.243 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 376 ELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 376 ~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
+++.-+++.+.-.++..++...-.. .++.|.++||.++.+.+.+.+.+.+|.++.... +.|+.|+|||+.|+.-.+.
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAGLAVDY 444 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHHHHhCc
Confidence 3455566666666666666543333 678999999999999999999999999886554 4569999999999875553
No 52
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.72 E-value=0.02 Score=63.94 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHh
Q 005099 370 TRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 370 tr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa 449 (714)
++.+| +.-+++.+.-.++..++...-....++.|.++||.++.+.+.+.+.+.||.++... .+.|+.|+|||+.|+
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~ 439 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLAR 439 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHHH
Confidence 45444 45555555444444444322112358899999999999999999999999987664 456799999999998
Q ss_pred HhhCC
Q 005099 450 VLAGD 454 (714)
Q Consensus 450 ~ls~~ 454 (714)
.-.+.
T Consensus 440 ~a~G~ 444 (504)
T 3ll3_A 440 QALGL 444 (504)
T ss_dssp HHTTS
T ss_pred HHcCc
Confidence 75554
No 53
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.68 E-value=0.17 Score=52.80 Aligned_cols=42 Identities=24% Similarity=0.408 Sum_probs=29.3
Q ss_pred CCCeeEEechhHHHHHHcccc--cCCCceEEEEEeCCcceEEEEEE
Q 005099 236 GLDVLRIINEPTAASLAYGFE--KKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 236 Gl~~~~li~Ep~AAAlay~~~--~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
|++ +.+.|+..|+|++-... .+...+++++-+|.| +-..++.
T Consensus 119 ~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~ 162 (321)
T 3r8e_A 119 HIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMM 162 (321)
T ss_dssp TSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred CCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEE
Confidence 665 58999999999975433 123567888889888 5555543
No 54
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.64 E-value=0.018 Score=64.93 Aligned_cols=77 Identities=9% Similarity=0.091 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhh
Q 005099 375 EELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLA 452 (714)
Q Consensus 375 e~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls 452 (714)
..+++-+++.+.-.++..++..+.....++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 45566666666666666666655444567899999999999999999999999987654 457899999999998643
No 55
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.54 E-value=0.4 Score=49.48 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=28.8
Q ss_pred cCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|+|++-.... +...+++++-+|.| +-..++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 4666 579999999998764432 23467888888887 444444
No 56
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.39 E-value=3.1 Score=43.32 Aligned_cols=60 Identities=8% Similarity=0.009 Sum_probs=42.3
Q ss_pred CcCeEEEEecCCCCHHHHHHHHHHHHHc-C--CCeeEEechhHHHHHHcccccCCCceEEEEEeCCcc
Q 005099 208 SVTKAVVTVPAYFNDSQRTATKDAGRIA-G--LDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGT 272 (714)
Q Consensus 208 ~v~~~VITVPa~f~~~qR~~l~~Aa~~A-G--l~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT 272 (714)
++..+.|++|...+......+++..+.. + .-.+.+.|+..|||+++ . ....+++=+|.|.
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~----~~~~v~v~~GTGi 132 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T----PDGGVVLISGTGS 132 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C----SSCEEEEEESSSE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C----CCCcEEEEEcCCc
Confidence 5778999999999877666666665543 3 13468999999999984 2 2345566667664
No 57
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.36 E-value=0.02 Score=64.10 Aligned_cols=74 Identities=24% Similarity=0.416 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHH---HHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhC
Q 005099 377 LCSDLLDRLKTPVETS---LRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~---L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~ 453 (714)
++.-+++.+.-.++.+ |++.+ ..++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+
T Consensus 399 l~RAvlEgia~~~r~~l~~l~~~g---~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 399 LARAFVEGLLCSQRDCLELIRSLG---ASITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT---CCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHHHHHcC
Confidence 3444454444333333 33444 357899999999999999999999999987654 4567889999999987555
Q ss_pred C
Q 005099 454 D 454 (714)
Q Consensus 454 ~ 454 (714)
.
T Consensus 475 ~ 475 (515)
T 3i8b_A 475 G 475 (515)
T ss_dssp C
T ss_pred C
Confidence 3
No 58
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.30 E-value=0.02 Score=63.95 Aligned_cols=74 Identities=19% Similarity=0.259 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHH----cCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhh
Q 005099 377 LCSDLLDRLKTPVETSLRD----AKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLA 452 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~----a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls 452 (714)
+++-+++.+.-.++.+++. .+ ..++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.
T Consensus 378 l~RAvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la~~a~ 453 (501)
T 3g25_A 378 FIRATLESLCYQTRDVMEAMSKDSG---IDVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLAGLAV 453 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSS---CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHHHHHh
Confidence 3444444444443333332 34 347899999999999999999999999987554 466799999999998765
Q ss_pred CC
Q 005099 453 GD 454 (714)
Q Consensus 453 ~~ 454 (714)
+.
T Consensus 454 G~ 455 (501)
T 3g25_A 454 GF 455 (501)
T ss_dssp TS
T ss_pred Cc
Confidence 54
No 59
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.20 E-value=0.02 Score=64.10 Aligned_cols=52 Identities=23% Similarity=0.215 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
.++.|.++||.++.+.+.+.+.+.||.++..... .|+.|+|||+.|+.-.+.
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA~~a~G~ 451 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVAAIGGGD 451 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHHHHHhCC
Confidence 4789999999999999999999999998876654 458899999999875553
No 60
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.07 E-value=0.038 Score=62.10 Aligned_cols=53 Identities=26% Similarity=0.295 Sum_probs=45.6
Q ss_pred CCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 401 KDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 401 ~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
..++.|.++||+++.+.+.+++.+.||.++.++. ..|+.|+|||+.|+.-.|.
T Consensus 401 ~~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~-~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 401 IRLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECchhhCHHHHHHHHHHHCCEEEeCC-CCchHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999999886654 4578999999999986654
No 61
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.04 E-value=0.024 Score=63.42 Aligned_cols=52 Identities=23% Similarity=0.277 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
.++.|.++||.++.+.+.+.+.+.||.++... .+.|+.|+|||+.|+.-.+.
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHHHHHhCc
Confidence 47899999999999999999999999987653 46779999999999875554
No 62
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.99 E-value=0.023 Score=63.57 Aligned_cols=52 Identities=27% Similarity=0.332 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
.++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHHHHHhCc
Confidence 47899999999999999999999999987654 36679999999999876654
No 63
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.90 E-value=0.023 Score=63.75 Aligned_cols=52 Identities=21% Similarity=0.115 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
.++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCC
Confidence 57889999999999999999999999988654 45679999999999976664
No 64
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.89 E-value=0.027 Score=64.02 Aligned_cols=80 Identities=23% Similarity=0.256 Sum_probs=57.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHH
Q 005099 370 TRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 370 tr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~a 448 (714)
++.+ ++.-+++.+.-.++.+++...-....++.|.++||.+ +.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 410 t~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 485 (572)
T 3jvp_A 410 KPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMFA 485 (572)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHHH
Confidence 5554 4555555554444444443221224578999999999 99999999999999987654 45789999999999
Q ss_pred hHhhC
Q 005099 449 GVLAG 453 (714)
Q Consensus 449 a~ls~ 453 (714)
+.-.+
T Consensus 486 ~~a~G 490 (572)
T 3jvp_A 486 SVAAG 490 (572)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87555
No 65
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.86 E-value=0.045 Score=60.97 Aligned_cols=76 Identities=25% Similarity=0.242 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhC
Q 005099 377 LCSDLLDRLKTPVETSLRDAK-LSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~-~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~ 453 (714)
++.-+++.+.-.+...++... .....++.|.++||.++.+.+.+++.+.+|.++... .+.|+.|+|||+.|+.-.+
T Consensus 372 ~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 372 LARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 344445544444444444321 112346789999999999999999999999887654 4556999999999987554
No 66
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.45 E-value=0.046 Score=61.03 Aligned_cols=52 Identities=29% Similarity=0.331 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhCC
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~~ 454 (714)
.++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~~~~G~ 454 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAAGIAVGF 454 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHHHhhcCc
Confidence 46899999999999999999999999887654 45679999999999875553
No 67
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.29 E-value=0.044 Score=61.22 Aligned_cols=51 Identities=25% Similarity=0.335 Sum_probs=43.4
Q ss_pred CC-CEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhHhhC
Q 005099 402 DL-DEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 402 ~i-~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ls~ 453 (714)
.+ +.|.++||.++.+.+.+.+.+.+|.++... .+.|+.|+|||+.|+.-.+
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHHHHHHhC
Confidence 35 779999999999999999999999887654 4556999999999987554
No 68
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=94.05 E-value=0.2 Score=52.82 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCCeeEEechhHHHHHHcc-c----ccC-CCceEEEEEeCCcceEEEEEEE--cC--ceEEEEEecCCCC
Q 005099 226 TATKDAGRIAGLDVLRIINEPTAASLAYG-F----EKK-NNETILVFDLGGGTFDVSVLEV--GD--GVFEVLSTSGDTH 295 (714)
Q Consensus 226 ~~l~~Aa~~AGl~~~~li~Ep~AAAlay~-~----~~~-~~~~vLVvD~GgGT~Dvsv~~~--~~--~~~~vl~~~gd~~ 295 (714)
..+..+-+..|+++ .+|+..+=|.+.|. . ... ....++|+|+|||+|+++++.- .. +.+ .. .....
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Slp 181 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSMN 181 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEES
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEEe
Confidence 44555556679987 66666655555552 2 110 2356999999999999999764 22 111 01 22368
Q ss_pred CChhHHHHHH
Q 005099 296 LGGDDFDKRI 305 (714)
Q Consensus 296 lGG~d~D~~l 305 (714)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999888776
No 69
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.99 E-value=6.1 Score=44.10 Aligned_cols=184 Identities=19% Similarity=0.251 Sum_probs=90.4
Q ss_pred CcCeEEEEe-cCCCCHHHHHHH--HHHHHHcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEEcCce
Q 005099 208 SVTKAVVTV-PAYFNDSQRTAT--KDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGV 284 (714)
Q Consensus 208 ~v~~~VITV-Pa~f~~~qR~~l--~~Aa~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~~~~~ 284 (714)
+++-+++|. |.+|+.-..-.. +.-+...|.+++. |+.-.|=+++.......... +++-+-||++.+-.+ .++.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p-~~l~vsGg~t~~~~~--~~~~ 147 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQVIAY--VSKK 147 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC-EEEEECSSCEEEEEE--ETTE
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC-cEEEEcCCCcEEEEE--eCCc
Confidence 456666666 777664422211 2223344666544 55555544332222111112 555566777765444 4688
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhccccccCCCchhcHHHHHHHHHHHHHhhhhcCCCceeeeeccccccCCCCCce
Q 005099 285 FEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKH 364 (714)
Q Consensus 285 ~~vl~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~aK~~Ls~~~~~~i~i~~~~~~~~g~~~ 364 (714)
+++++..-|.. -|+-||.. ...| |......+ . |...|...+ ..+.+|....+ .+
T Consensus 148 ~~~lg~t~d~s-~G~~~D~~-a~~l--------gl~~~gg~-~---ie~lA~~g~--------~~~~~p~~~~~----~~ 201 (540)
T 3en9_A 148 YRVFGETLDIA-VGNCLDQF-ARYV--------NLPHPGGP-Y---IEELARKGK--------KLVDLPYTVKG----MD 201 (540)
T ss_dssp EEEEEEBSSSC-HHHHHHHH-HHHT--------TCCSSCHH-H---HHHHHHTCC--------CCCCCCCCEET----TE
T ss_pred eEEEeeccchH-hHHHHHHH-HHHc--------CCCCCCHH-H---HHHHHHcCC--------ccCcCCCCCCC----cc
Confidence 99999877644 46666642 2222 22211112 2 222232221 11222221111 11
Q ss_pred eEEEecHH----------HHHHHHH----HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc
Q 005099 365 IDTTLTRV----------KFEELCS----DLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT 426 (714)
Q Consensus 365 ~~~~itr~----------efe~l~~----~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f 426 (714)
+++.=-.. ..++++. -+++.+.+.+.++++..+ ++.|+|+||-+....+++.|.+.+
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 11100000 0122332 234444555666666654 568999999999999999999876
No 70
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=93.94 E-value=0.11 Score=54.25 Aligned_cols=76 Identities=17% Similarity=0.120 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHH
Q 005099 225 RTATKDAGRIAGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD 302 (714)
Q Consensus 225 R~~l~~Aa~~AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D 302 (714)
...+..+-+..|+++..|-.|.+|...+.+... ......+|+|+|||+|.+++.+ ++.+. . ..+..+|+..+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~--~-~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVR--E-VISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEE--E-EEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCcee--e-EEEEeccHHHHH
Confidence 344555555789998555556666444333221 1246799999999999999976 33331 1 223689998887
Q ss_pred HHH
Q 005099 303 KRI 305 (714)
Q Consensus 303 ~~l 305 (714)
+.+
T Consensus 175 e~~ 177 (315)
T 1t6c_A 175 ETF 177 (315)
T ss_dssp HHH
T ss_pred HHh
Confidence 776
No 71
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.64 E-value=0.064 Score=59.63 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=40.1
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhH
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
.++.|.++||.++.+.+.+.+.+.||.++.... .|+.|+|||+.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHHHHHH
Confidence 468999999999999999999999999886543 68999999666554
No 72
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.52 E-value=6.2 Score=40.67 Aligned_cols=42 Identities=17% Similarity=0.308 Sum_probs=28.7
Q ss_pred cCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.+++ +.+.|+..|||++..... +...+++++-+|.| +-..++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 3666 589999999998753321 23567888888887 444444
No 73
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=92.58 E-value=0.45 Score=53.08 Aligned_cols=74 Identities=23% Similarity=0.340 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCeeEEechhHHHHHHc-ccc--cCCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHH
Q 005099 226 TATKDAGRIAGLDVLRIINEPTAASLAY-GFE--KKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD 302 (714)
Q Consensus 226 ~~l~~Aa~~AGl~~~~li~Ep~AAAlay-~~~--~~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D 302 (714)
..+..+-+..|+++ .+|+..+=|.+.| +.. .......||+|+|||+|.+++.+ ++.+.. .....+|.-.+.
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrlt 173 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVSFA 173 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHHHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHHHH
Confidence 34445555569987 6676666555555 221 11123799999999999999875 333321 223689998887
Q ss_pred HHH
Q 005099 303 KRI 305 (714)
Q Consensus 303 ~~l 305 (714)
+.+
T Consensus 174 e~f 176 (513)
T 1u6z_A 174 QLY 176 (513)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 74
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=92.12 E-value=3.5 Score=44.11 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=29.2
Q ss_pred cCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|||++..... ....+++++-+|.| +-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 3776 589999999999754321 23467888888887 445555
No 75
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=91.86 E-value=13 Score=38.37 Aligned_cols=45 Identities=33% Similarity=0.419 Sum_probs=31.0
Q ss_pred HcCCCeeEEechhHHHHHHcccc------------cCCCceEEEEEeCCcceEEEEEE
Q 005099 234 IAGLDVLRIINEPTAASLAYGFE------------KKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 234 ~AGl~~~~li~Ep~AAAlay~~~------------~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
..|++.+.+.|+-.|+|++-... .+...+++++-+|.| +=..++.
T Consensus 100 ~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG-iG~giv~ 156 (332)
T 1sz2_A 100 NLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG-LGVAHLV 156 (332)
T ss_dssp HHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS-EEEEEEE
T ss_pred HhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc-ceEEEEe
Confidence 34787679999999999976432 123467888889888 3444443
No 76
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=91.62 E-value=1.8 Score=44.10 Aligned_cols=68 Identities=7% Similarity=-0.107 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCc--hhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhH
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRI--PAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssri--p~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
....++++..+.+-..+ ...+ ..+++.|+|.||-+.. +.+++.+++.. .....|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~----~~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG----LTLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT----CCEEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC----CeecccCcCHHHHHHHHHHh
Confidence 34455555555555555 2222 1256789999998776 56666665542 11233668889999998864
No 77
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=90.65 E-value=0.51 Score=49.11 Aligned_cols=75 Identities=19% Similarity=0.380 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCeeEEechhHHHHHHc-ccc--cC-CCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhH
Q 005099 225 RTATKDAGRIAGLDVLRIINEPTAASLAY-GFE--KK-NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDD 300 (714)
Q Consensus 225 R~~l~~Aa~~AGl~~~~li~Ep~AAAlay-~~~--~~-~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d 300 (714)
...+..+-+..|+++ .+|+..+=|.+.| +.. .. .+...||+|+|||+|.+++++ ++.+.. ....++|.-.
T Consensus 92 ~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vr 165 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCHHH
T ss_pred HHHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechhhH
Confidence 344555666689998 5555444443333 221 11 136799999999999999986 332211 2236789877
Q ss_pred HHHHH
Q 005099 301 FDKRI 305 (714)
Q Consensus 301 ~D~~l 305 (714)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 76654
No 78
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=89.18 E-value=0.26 Score=54.51 Aligned_cols=71 Identities=8% Similarity=-0.005 Sum_probs=54.0
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhh-cCCCCCcCCCChhHHHhHHHHHHhH
Q 005099 375 EELCSDLLDR--LKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKM-TGREPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 375 e~l~~~l~~~--i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~-fg~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
..++.-+++. +.-.++.+++...- .+.|.++||.++.|...+.+.+. ||.++.++.. .|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~-~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTANA-HNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESS-CCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCC-CchHHHHHHHHhCc
Confidence 4555666653 55555666665431 27899999999999999999999 9998876644 56889999999986
No 79
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.56 E-value=1.8 Score=43.29 Aligned_cols=21 Identities=33% Similarity=0.491 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEECCe
Q 005099 77 KVVGIDLGTTNSAVAAMEGGK 97 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~~g~ 97 (714)
+.+.||.|+|+++.+++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 589999999999999987653
No 80
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=86.84 E-value=29 Score=35.19 Aligned_cols=65 Identities=20% Similarity=0.077 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCC--chhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHhH
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTR--IPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssr--ip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
.+..++++..+.+-..+...-. . +...|+|.||.+. .|.+.+.+++.+ ..|+.+.++||+++|..
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHhh
Confidence 3445556665556555555432 2 6678999999864 567777777653 22567889999998753
No 81
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=86.11 E-value=4.2 Score=45.51 Aligned_cols=67 Identities=21% Similarity=0.186 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCC-CCCcC-CCChhHHHhHHHHHHhHhhCC
Q 005099 383 DRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGR-EPNVT-VNPDEVVALGAAVQAGVLAGD 454 (714)
Q Consensus 383 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~-~~~~~-~np~eaVA~GAa~~aa~ls~~ 454 (714)
+-+.+.+..+.+..+ ++.|+|.||.+....+++.|.+..+. .+..+ .--|.++++|+|+++....+.
T Consensus 293 ~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 293 RAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 344455555556544 67999999999999999999876553 33222 244899999999998876554
No 82
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=85.16 E-value=8.7 Score=42.13 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHcCCC--eeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEE
Q 005099 221 NDSQRTATKDAGRIAGLD--VLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEV 280 (714)
Q Consensus 221 ~~~qR~~l~~Aa~~AGl~--~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~ 280 (714)
...-.+.+++|.+.-|++ ++.++|+.+|++++..+.. ...++-+=+|-||=-+.+...
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~--~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD--PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC--TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC--CCcEEEEEEecCcceEEEeec
Confidence 456677899999888886 4789999999999876653 456666668888654444443
No 83
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=83.74 E-value=1.6 Score=46.04 Aligned_cols=72 Identities=21% Similarity=0.248 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcC-CCCC----cCCCChhHHHhHHHHHHhH
Q 005099 376 ELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTG-REPN----VTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 376 ~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg-~~~~----~~~np~eaVA~GAa~~aa~ 450 (714)
++..-+.+=+...|.+.++... ..++.|+++||+++.|.+.+.|++.++ .++. ..++|+.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 4445555555556666665533 246789999999999999999999984 3332 2345655445556676664
No 84
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=82.99 E-value=2.7 Score=45.97 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHcCCC--eeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEE
Q 005099 223 SQRTATKDAGRIAGLD--VLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 223 ~qR~~l~~Aa~~AGl~--~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
.-++.++++....|++ ++.++|+..|++++-.+ ....+++.+=+|-|+=-.-+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~--~~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNY--TDAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHH--HCTTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhh--cCCccEEEEEECcEEEEEEEEC
Confidence 4566777887666665 57999999999998766 2345677777888854434443
No 85
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=82.75 E-value=16 Score=36.32 Aligned_cols=42 Identities=31% Similarity=0.419 Sum_probs=28.2
Q ss_pred cCCCeeEEechhHHHHHHcccc---cCCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFE---KKNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~---~~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|||++.... ......++++-+|.| +-..++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 3676 58999999999985432 211235777888877 555554
No 86
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=82.59 E-value=10 Score=40.08 Aligned_cols=66 Identities=12% Similarity=0.297 Sum_probs=40.8
Q ss_pred CCcCeEEEEecCCCCHH----------------HHHHHHHHHHHcCCCeeEEechhHHHHHHcccc-cCCCceEEEEEeC
Q 005099 207 DSVTKAVVTVPAYFNDS----------------QRTATKDAGRIAGLDVLRIINEPTAASLAYGFE-KKNNETILVFDLG 269 (714)
Q Consensus 207 ~~v~~~VITVPa~f~~~----------------qR~~l~~Aa~~AGl~~~~li~Ep~AAAlay~~~-~~~~~~vLVvD~G 269 (714)
.++..+.|++|...+.. -++.+.+. .|++ +.+.|+..|||++.... ... .+++++-+|
T Consensus 147 ~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-V~v~NDanaaalaE~~~g~~~-~~~v~l~~G 221 (380)
T 2hoe_A 147 SKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEK---YGIE-VWVENDADMGAVGEKWYTKRD-DSFAWILTG 221 (380)
T ss_dssp CCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHH---HCSE-EEEEEHHHHHHHHHHHHTTCC-SCEEEEEES
T ss_pred CcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHH---hCCC-EEEechHHHHHHHHHHhCCCC-CcEEEEEeC
Confidence 44567778887754321 12333332 3665 58999999999985432 122 678888888
Q ss_pred CcceEEEEE
Q 005099 270 GGTFDVSVL 278 (714)
Q Consensus 270 gGT~Dvsv~ 278 (714)
.| +-..++
T Consensus 222 tG-iG~giv 229 (380)
T 2hoe_A 222 KG-IGAGII 229 (380)
T ss_dssp SS-CEEEEE
T ss_pred Cc-eEEEEE
Confidence 87 344554
No 87
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=79.27 E-value=3.9 Score=45.32 Aligned_cols=74 Identities=19% Similarity=0.267 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCeeEEechhHHHHHHc-cccc-CCCceEEEEEeCCcceEEEEEEEcCceEEEEEecCCCCCChhHHH
Q 005099 225 RTATKDAGRIAGLDVLRIINEPTAASLAY-GFEK-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD 302 (714)
Q Consensus 225 R~~l~~Aa~~AGl~~~~li~Ep~AAAlay-~~~~-~~~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~~~gd~~lGG~d~D 302 (714)
...+..+-+..|+++ .+|+..+=|.+.| +... -.....||+|+|||+|.+++++ ++.+ . .....++|.-.+.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSC--G-EGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEE--C-CCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCee--e-eEEEecceEEehh
Confidence 445566666779987 6666555555444 2221 1123459999999999999987 3322 1 1223678988777
Q ss_pred HH
Q 005099 303 KR 304 (714)
Q Consensus 303 ~~ 304 (714)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 88
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=77.37 E-value=17 Score=38.39 Aligned_cols=43 Identities=23% Similarity=0.334 Sum_probs=29.5
Q ss_pred cCCCeeEEechhHHHHHHccccc---------------CCCceEEEEEeCCcceEEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK---------------KNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~---------------~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
.|++ +.+.|+..|+|++-.... +..++++++-+|.| +-.+++.
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~givi 165 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVVI 165 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEEE
Confidence 3777 589999999999753322 23577888888876 4455553
No 89
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=77.29 E-value=3.3 Score=43.66 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCC-CCC----cCCCChhHHHhHHHHHHh
Q 005099 375 EELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGR-EPN----VTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 375 e~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~-~~~----~~~np~eaVA~GAa~~aa 449 (714)
+++..-+.+=+...|.+.++... ..+.|+++||+++.|.+.+.|++.++. ++. ..++|+.-=|..-|++|.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~ 341 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHH
Confidence 35555566666666666776542 356899999999999999999999842 332 234555433444466665
Q ss_pred H
Q 005099 450 V 450 (714)
Q Consensus 450 ~ 450 (714)
.
T Consensus 342 ~ 342 (370)
T 3cqy_A 342 R 342 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 90
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=75.79 E-value=18 Score=39.33 Aligned_cols=56 Identities=16% Similarity=0.226 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHHcCCCe--eEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEE
Q 005099 221 NDSQRTATKDAGRIAGLDV--LRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 221 ~~~qR~~l~~Aa~~AGl~~--~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
...-.+.+++|...-|+++ +.++|+.+|++++..+.. ...++-+=+|-|+= .+++.
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~--~~~~iglIlGTG~n-a~yve 228 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED--PKCAVGLIVGTGTN-VAYIE 228 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEE-EEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC--CCcEEEEEEeCCcc-eEEEE
Confidence 4566788888888778863 589999999999877663 45667777888864 44443
No 91
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=74.95 E-value=25 Score=35.53 Aligned_cols=49 Identities=18% Similarity=0.166 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhcCCC------CCcCCCChhHHHhHHHHHHhH
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMTGRE------PNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~fg~~------~~~~~np~eaVA~GAa~~aa~ 450 (714)
+++.|+|-||.+..+.+.+.|++.+... +....-.+.+.++||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 3578999999998888888888776421 222335578999999987754
No 92
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=71.91 E-value=30 Score=35.18 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=29.6
Q ss_pred cCCCeeEEechhHHHHHHcccc--cCCCceEEEEEeCCcceEEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFE--KKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~--~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
.|++ +.+.|+..|+|++-... .+..++++++-+|.| +-..++.
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~ 141 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIV 141 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEE
Confidence 3776 58999999999976443 223467888888876 4445543
No 93
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=71.74 E-value=19 Score=38.72 Aligned_cols=42 Identities=17% Similarity=0.314 Sum_probs=29.1
Q ss_pred cCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|||++..... ....+++++-+|.| +-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 3776 589999999999854321 23467888888887 445554
No 94
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=68.80 E-value=8 Score=45.07 Aligned_cols=61 Identities=23% Similarity=0.367 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc---CCCCCcCC---CChhHHHhHHHHHHhH
Q 005099 385 LKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT---GREPNVTV---NPDEVVALGAAVQAGV 450 (714)
Q Consensus 385 i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f---g~~~~~~~---np~eaVA~GAa~~aa~ 450 (714)
+.+.+.++.++. .++.|+|.||......+++.|.+.+ |.++..+. --|..+|+|+|++|+.
T Consensus 693 L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 344444454443 4678999999999999999999887 44444432 2389999999988865
No 95
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=68.55 E-value=12 Score=37.82 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=29.5
Q ss_pred HcCCCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEE
Q 005099 234 IAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 234 ~AGl~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
..|++ +.+.|+..|||++.....+..++++++-+|.| +-..++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEE
Confidence 34666 58999999999986542223467888889887 344444
No 96
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=68.43 E-value=8.7 Score=43.73 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=39.4
Q ss_pred CCCEEEEEcCCCCchhHHHHHHhhc-CCCCCc---CCCChhHHHhHHHHHHhH
Q 005099 402 DLDEVILVGGSTRIPAVQELVKKMT-GREPNV---TVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 402 ~i~~VvLvGGssrip~v~~~l~~~f-g~~~~~---~~np~eaVA~GAa~~aa~ 450 (714)
.++.|+|+||.+....+++.|.+.+ |.++.. ..--|-++|+|.|+.|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 4679999999999999999999988 544432 234489999999998864
No 97
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=67.83 E-value=7.8 Score=40.72 Aligned_cols=43 Identities=16% Similarity=0.346 Sum_probs=28.0
Q ss_pred CCCeeEEechhHHHHHHc-----cccc---CCCceEEEEEeCCcceEEEEEE
Q 005099 236 GLDVLRIINEPTAASLAY-----GFEK---KNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 236 Gl~~~~li~Ep~AAAlay-----~~~~---~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
|+. +++|+-.+=|.+.| .+.. ...++++|+|+|||++.+++..
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 443 46776655554444 3321 1235799999999999999873
No 98
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=65.30 E-value=54 Score=33.68 Aligned_cols=42 Identities=21% Similarity=0.197 Sum_probs=28.9
Q ss_pred cCCCeeEEechhHHHHHHccccc--CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK--KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|||++..... ....+++++-+|.| +-..++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3676 589999999999754321 23467888888887 444544
No 99
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=64.30 E-value=4.4 Score=45.42 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
+..++|||+|||+++++++..
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECcccEEEEEECC
Confidence 568999999999999999864
No 100
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=63.60 E-value=33 Score=38.06 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=31.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHcCCCeeEEe-chhHHHHHH
Q 005099 210 TKAVVTVPAYFNDSQRTATKDAGRIAGLDVLRII-NEPTAASLA 252 (714)
Q Consensus 210 ~~~VITVPa~f~~~qR~~l~~Aa~~AGl~~~~li-~Ep~AAAla 252 (714)
..++.-+|..++...-.++.+++...|+++...| ---.+..+.
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~ 174 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVN 174 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHH
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEc
Confidence 3455559999999999999999999999876543 333344443
No 101
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=63.17 E-value=4.7 Score=44.64 Aligned_cols=21 Identities=29% Similarity=0.550 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
+..++|||+|||++++++++.
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCcceEEEEECC
Confidence 568999999999999999864
No 102
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=62.70 E-value=12 Score=43.51 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhc---CCCCCcC---CCChhHHHhHHHHHHhHhhC
Q 005099 385 LKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT---GREPNVT---VNPDEVVALGAAVQAGVLAG 453 (714)
Q Consensus 385 i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~f---g~~~~~~---~np~eaVA~GAa~~aa~ls~ 453 (714)
+.+.+.++.+..+ ++.|+|+||-+....+++.|.+.+ |.++..+ .--|-++|+|+|++|+....
T Consensus 681 L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 681 TYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 3344444444433 578999999999999999999887 4443322 23489999999998875443
No 103
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=62.00 E-value=42 Score=39.87 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHc-CC--CeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEE
Q 005099 221 NDSQRTATKDAGRIA-GL--DVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 221 ~~~qR~~l~~Aa~~A-Gl--~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
...-.+.+++|...- ++ +++.++|+.+|++++..+.. ...++-+=+|-||=-.-+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~--~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE--PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC--CCcEEEEEEeCCeeEEEEEc
Confidence 455677788887644 45 58999999999998876663 35666667888864433333
No 104
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=61.40 E-value=5.4 Score=33.63 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=16.9
Q ss_pred eEEEEEcCccceEEEEEEC
Q 005099 77 KVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~~ 95 (714)
.++|||+|+..+.||+.+.
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 4899999999999998765
No 105
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=60.79 E-value=8 Score=34.76 Aligned_cols=22 Identities=23% Similarity=0.292 Sum_probs=19.1
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGG 96 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g 96 (714)
++.++|||+|+..+.||+.+..
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETT
T ss_pred CCeEEEEEeCCCEEEEEEEcCC
Confidence 3479999999999999998764
No 106
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=60.13 E-value=51 Score=35.73 Aligned_cols=42 Identities=19% Similarity=0.330 Sum_probs=28.5
Q ss_pred CeeEEechhHHHHHHc-----cccc------------CCCceEEEEEeCCcceEEEEEE
Q 005099 238 DVLRIINEPTAASLAY-----GFEK------------KNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 238 ~~~~li~Ep~AAAlay-----~~~~------------~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
..+++|+-.+=|.+.| .+.. ....+++|+|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 3468887766655554 2221 1145689999999999999864
No 107
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=59.19 E-value=6.6 Score=43.57 Aligned_cols=20 Identities=25% Similarity=0.388 Sum_probs=18.4
Q ss_pred CCeEEEEEcCccceEEEEEE
Q 005099 75 NEKVVGIDLGTTNSAVAAME 94 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~ 94 (714)
+.+++|||+|||+++++++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 55899999999999999987
No 108
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=58.14 E-value=7 Score=43.20 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=18.6
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
+..++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEcCCCceEEEEECC
Confidence 568999999999999999864
No 109
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=57.47 E-value=6.7 Score=39.46 Aligned_cols=22 Identities=18% Similarity=0.407 Sum_probs=19.1
Q ss_pred CeEEEEEcCccceEEEEEECCe
Q 005099 76 EKVVGIDLGTTNSAVAAMEGGK 97 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g~ 97 (714)
.++++||+|+|+++++++++++
T Consensus 2 ~MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 2 SLILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp -CEEEEEECSSEEEEEEEETTE
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 3689999999999999998763
No 110
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=57.31 E-value=6.7 Score=44.10 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=18.1
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
+..++|||+|||+++++++..
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 568999999999999999864
No 111
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=57.07 E-value=8.4 Score=42.73 Aligned_cols=20 Identities=30% Similarity=0.556 Sum_probs=17.7
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 005099 76 EKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~ 95 (714)
..++|||+|||++++++++.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CeEEEEEeCCcceEEEEECC
Confidence 47999999999999998853
No 112
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=55.71 E-value=7 Score=43.20 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=18.4
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
|..++|||+|||+++++++..
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 457999999999999999864
No 113
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=55.13 E-value=5.6 Score=43.76 Aligned_cols=21 Identities=33% Similarity=0.325 Sum_probs=16.5
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
|..++|||+|||++++++++.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp ---CEEEEECSSEEEEEEECT
T ss_pred hceEEEEEcCCCCeEEEEEEC
Confidence 458999999999999998863
No 114
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=54.98 E-value=8.1 Score=43.05 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=18.5
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
+..++|||+|||.+++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 568999999999999988864
No 115
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=54.72 E-value=7.8 Score=42.89 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=18.4
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
+..++|||+|||++++++++.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 457999999999999999853
No 116
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=54.35 E-value=7.6 Score=42.98 Aligned_cols=21 Identities=24% Similarity=0.283 Sum_probs=18.5
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
|..++|||+|||++++++++.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADR 24 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCceEEEEECC
Confidence 568999999999999998853
No 117
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=53.01 E-value=72 Score=33.98 Aligned_cols=44 Identities=20% Similarity=0.364 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhc
Q 005099 379 SDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMT 426 (714)
Q Consensus 379 ~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~f 426 (714)
+-+..++.+.|-..... + ..+|.|+++||-. +.+.|++.+.+.+
T Consensus 311 d~f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 311 KTFVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 33444555555444433 2 4699999999999 9999999998765
No 118
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=52.95 E-value=1.3e+02 Score=32.41 Aligned_cols=58 Identities=19% Similarity=0.284 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHcC---CCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEEE
Q 005099 221 NDSQRTATKDAGRIAG---LDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEV 280 (714)
Q Consensus 221 ~~~qR~~l~~Aa~~AG---l~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~~ 280 (714)
...-.+.+++|...-| ++++.++|+.+|+.++..+.. +...+-+=+|-||=-+.+.++
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~--~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED--PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC--CCceEEEEEeCCceEEEEEec
Confidence 3455777888887753 567899999999999866543 346666667888644333333
No 119
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=52.59 E-value=8.5 Score=42.45 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=18.1
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
|..++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred ccEEEEEEeCCcceEEEEECC
Confidence 347899999999999999864
No 120
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=52.46 E-value=62 Score=34.38 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhc
Q 005099 378 CSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMT 426 (714)
Q Consensus 378 ~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~f 426 (714)
++-+..++.+.|-...... ..+|.|+++||-. +.+.|++.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 3444556666665555543 3589999999999 9999999998765
No 121
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=52.45 E-value=53 Score=39.04 Aligned_cols=56 Identities=16% Similarity=0.366 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHHcC-CC--eeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEE
Q 005099 221 NDSQRTATKDAGRIAG-LD--VLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 221 ~~~qR~~l~~Aa~~AG-l~--~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
...-++.+.++...-| ++ ++.++|+..|++++-.+. ....++.+=+|-|+ -.+++.
T Consensus 182 g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~--~~~~~iglilGTGv-ngg~i~ 240 (917)
T 1cza_N 182 GADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD--DQHCEVGLIIGTGT-NACYME 240 (917)
T ss_dssp TSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH--CTTEEEEEEESSSE-EEEEEE
T ss_pred CCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc--CCCcEEEEEEECCc-ceEEEe
Confidence 3455677778777666 54 689999999999987655 34567777788885 444444
No 122
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=52.31 E-value=8.1 Score=42.95 Aligned_cols=20 Identities=35% Similarity=0.534 Sum_probs=17.7
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 005099 76 EKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~ 95 (714)
.+++|||+|||.+++++++.
T Consensus 4 kYvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred eEEEEEEccccceeeeEEcC
Confidence 47999999999999998853
No 123
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=51.63 E-value=8.1 Score=42.53 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=17.1
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 005099 76 EKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~ 95 (714)
..++|||+|||+++++++..
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 36899999999999998854
No 124
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=49.46 E-value=1e+02 Score=27.93 Aligned_cols=104 Identities=20% Similarity=0.252 Sum_probs=58.9
Q ss_pred EccCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHH----------------H---HhhhhHHHHHHHHHHHhccCCC--H
Q 005099 570 ITGASTLPNDEVQRMVQEAERFAKEDKEKRDAIDT----------------K---NQADSVVYQTEKQLKELGDKVP--A 628 (714)
Q Consensus 570 i~~~~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~----------------~---n~lE~~i~~~~~~l~~~~~~~~--~ 628 (714)
+........+++-+...+++.-...|...|+++.. + ..|...+.+....|.+|...+. -
T Consensus 16 ~~~~~p~~~~elik~L~~le~sassDa~vrq~Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~ 95 (152)
T 4fla_A 16 FQGAGPLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAEL 95 (152)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhhccccchHHHHHHHHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444566666667777777777776665532 1 2233334444444444332222 2
Q ss_pred HHHHHHHHHHHHHHHHHhcC------CHHHHHHHHHHHHHHHHHHHHHHhc
Q 005099 629 EVKGKVEGKLKELKDAIAEG------STQAMKDTMAALNQEVMQLGQSLYN 673 (714)
Q Consensus 629 ~~~~~~~~~l~~~~~wl~~~------~~~~~~~~~~~l~~~~~~i~~~~~~ 673 (714)
++|..+.+.|.++....... ..++|+.+++.+.+....+.+.+-+
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45677777777776555432 3778888888888888887776543
No 125
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=49.41 E-value=9.2 Score=38.93 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=17.8
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEGG 96 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~g 96 (714)
....+|||+|+|.+++++.+++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp --CEEEEEECSSEEEEEEECSS
T ss_pred CCeEEEEEEChhhEEEEEEcCC
Confidence 5679999999999999988654
No 126
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=49.37 E-value=8.6 Score=42.19 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=17.6
Q ss_pred CCeEEEEEcCccceEEEEEE
Q 005099 75 NEKVVGIDLGTTNSAVAAME 94 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~ 94 (714)
+..++|||+|||++++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 44699999999999999885
No 127
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=49.00 E-value=11 Score=41.61 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=17.7
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 005099 76 EKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~ 95 (714)
..++|||+|||++++++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 47999999999999999864
No 128
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=47.84 E-value=1.2e+02 Score=31.93 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhc
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMT 426 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~f 426 (714)
.++-+..++.+.|-...... .++|.|+++||-+ +.+.|++.+.+.+
T Consensus 302 a~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 33444455555555444443 3589999999988 5788999988765
No 129
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=46.77 E-value=11 Score=34.22 Aligned_cols=19 Identities=37% Similarity=0.683 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEEC
Q 005099 77 KVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~~ 95 (714)
.++|||+|+..+.+|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 5999999999999998754
No 130
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=46.52 E-value=12 Score=41.21 Aligned_cols=20 Identities=30% Similarity=0.421 Sum_probs=17.7
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 005099 76 EKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~ 95 (714)
..++|||+|||++++++++.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 47999999999999998863
No 131
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=46.26 E-value=21 Score=32.83 Aligned_cols=18 Identities=22% Similarity=0.480 Sum_probs=16.3
Q ss_pred eEEEEEcCccceEEEEEE
Q 005099 77 KVVGIDLGTTNSAVAAME 94 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~ 94 (714)
.|+|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999874
No 132
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=46.00 E-value=33 Score=29.13 Aligned_cols=14 Identities=14% Similarity=0.161 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHH
Q 005099 632 GKVEGKLKELKDAI 645 (714)
Q Consensus 632 ~~~~~~l~~~~~wl 645 (714)
+.+...|-.++..|
T Consensus 7 N~aE~~iy~~e~~L 20 (113)
T 1ud0_A 7 HMLESYAFNMKATV 20 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33444444444444
No 133
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=45.41 E-value=37 Score=34.23 Aligned_cols=42 Identities=24% Similarity=0.414 Sum_probs=29.1
Q ss_pred cCCCeeEEechhHHHHHHcccc--cCCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFE--KKNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~--~~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|+|++-... .+..++++++-+|.| +-..++
T Consensus 97 ~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv 140 (297)
T 4htl_A 97 TGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIF 140 (297)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEE
Confidence 3776 58999999999875432 123467888888877 444554
No 134
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=45.00 E-value=13 Score=38.52 Aligned_cols=37 Identities=14% Similarity=0.096 Sum_probs=25.4
Q ss_pred EEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEE
Q 005099 241 RIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 241 ~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
....-|.|.|....... ....+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~~--~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKNI--EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHHT--CSSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHhc--CCCEEEEEcCcchhhhhhhc
Confidence 34566766666332322 13579999999999998886
No 135
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=44.71 E-value=56 Score=35.35 Aligned_cols=88 Identities=13% Similarity=0.139 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhcC---CCcCeEEEEecCCCCH------HHHHHHHHHHHH-c---CC--CeeEEechhHHHHHHc---
Q 005099 192 QVLRKLVDDASKFLN---DSVTKAVVTVPAYFND------SQRTATKDAGRI-A---GL--DVLRIINEPTAASLAY--- 253 (714)
Q Consensus 192 ~~L~~l~~~a~~~~~---~~v~~~VITVPa~f~~------~qR~~l~~Aa~~-A---Gl--~~~~li~Ep~AAAlay--- 253 (714)
..|+.|.+.|.+... ...+.+.+---|..-. .+++.+.++++. . ++ .-+++|+..+=+.++|
T Consensus 89 ~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~v 168 (452)
T 3zx3_A 89 AYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITI 168 (452)
T ss_dssp HHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHH
Confidence 456666666664322 1234555554454422 234444444333 2 44 3468888666555544
Q ss_pred --cccc---CCCceEEEEEeCCcceEEEEEE
Q 005099 254 --GFEK---KNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 254 --~~~~---~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
.+.. ....++.++|+|||++.++...
T Consensus 169 nyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 169 NYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred HhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 3321 1236788999999999998654
No 136
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=44.11 E-value=27 Score=34.98 Aligned_cols=46 Identities=22% Similarity=0.156 Sum_probs=32.6
Q ss_pred CCEEEEEcCCCCchhHHHHHHhhcCCC-------CCcCCCChhHHHhHHHHHH
Q 005099 403 LDEVILVGGSTRIPAVQELVKKMTGRE-------PNVTVNPDEVVALGAAVQA 448 (714)
Q Consensus 403 i~~VvLvGGssrip~v~~~l~~~fg~~-------~~~~~np~eaVA~GAa~~a 448 (714)
++.|+|.||.+..+.+.+.+++.+... +......+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 467999998887788888887776432 1223345678999999875
No 137
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=43.35 E-value=1.2e+02 Score=32.95 Aligned_cols=56 Identities=20% Similarity=0.325 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHcC---CCeeEEechhHHHHHHcccccCCCceEEEEEeCCcceEEEEEE
Q 005099 221 NDSQRTATKDAGRIAG---LDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLE 279 (714)
Q Consensus 221 ~~~qR~~l~~Aa~~AG---l~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT~Dvsv~~ 279 (714)
...-.+.+++|.+.-| ++++.++|+.+|..++..+.. +...+=+=+|-||= .+.++
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~--~~~~iGlI~GTGtN-a~Y~E 241 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED--HQCEVGMIVGTGCN-ACYME 241 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC--TTEEEEEEESSSEE-EEEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC--CCceEEEEEecCCc-eEEee
Confidence 4456788889998887 367889999999888776654 34555556788865 44443
No 138
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=42.47 E-value=42 Score=33.56 Aligned_cols=48 Identities=19% Similarity=0.060 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCCchhHHHHHHhhcC------------CCCCcCCCChhHHHhHHHHHHhH
Q 005099 403 LDEVILVGGSTRIPAVQELVKKMTG------------REPNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 403 i~~VvLvGGssrip~v~~~l~~~fg------------~~~~~~~np~eaVA~GAa~~aa~ 450 (714)
++.|+|.||.+..+.+.+.|++.+. .++....-.+.+.++||+..+..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 5689999998776766666655441 11222234567899999987754
No 139
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=41.62 E-value=14 Score=40.34 Aligned_cols=18 Identities=39% Similarity=0.652 Sum_probs=16.1
Q ss_pred EEEEEcCccceEEEEEEC
Q 005099 78 VVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 78 vIGID~GTt~s~va~~~~ 95 (714)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 799999999999998853
No 140
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=40.14 E-value=1.6e+02 Score=31.22 Aligned_cols=45 Identities=13% Similarity=0.125 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhc
Q 005099 378 CSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMT 426 (714)
Q Consensus 378 ~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~f 426 (714)
++-+..++.+.|-......+ .+|.|+++||-. +.+.|++.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l 347 (403)
T 2iir_A 302 LEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYL 347 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhh
Confidence 34455566666655555533 489999999999 9999999998876
No 141
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=39.15 E-value=18 Score=39.75 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=17.0
Q ss_pred eEEEEEcCccceEEEEEEC
Q 005099 77 KVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~~ 95 (714)
.++|||+|||++++++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 6899999999999998853
No 142
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=37.98 E-value=1.2e+02 Score=26.17 Aligned_cols=80 Identities=20% Similarity=0.324 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHH---HHHhccCCCHHHHHHHHHHHHHHHHHHhc--C----CHH
Q 005099 581 VQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQ---LKELGDKVPAEVKGKVEGKLKELKDAIAE--G----STQ 651 (714)
Q Consensus 581 i~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~~~wl~~--~----~~~ 651 (714)
+.|++++...|..+-....++.+....-..--|.++.. |.+.. .+-++-+.+|...+.+++++|.. . +.+
T Consensus 17 vkRL~KE~~~Y~kE~~~q~~kiekmk~e~~dey~iKkq~evL~Et~-~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~e 95 (116)
T 3mxz_A 17 CKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESR-MMIPDCHKRLESALADLKSTLAELEETDEKEGP 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhcccCCCChH
Confidence 46667766666655544444433322111112333333 33321 23366678999999999999983 1 356
Q ss_pred HHHHHHHHHH
Q 005099 652 AMKDTMAALN 661 (714)
Q Consensus 652 ~~~~~~~~l~ 661 (714)
+|....+-|.
T Consensus 96 e~~~Ak~~l~ 105 (116)
T 3mxz_A 96 EIEDAKKTVA 105 (116)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666555544
No 143
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=37.93 E-value=73 Score=33.50 Aligned_cols=44 Identities=14% Similarity=0.226 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhc
Q 005099 379 SDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMT 426 (714)
Q Consensus 379 ~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~f 426 (714)
+-+..++.+.|-..... + ..+|.|+++||-. ..+.|++.+.+.+
T Consensus 294 d~f~yri~k~IGa~aa~--L--~gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 294 EIFSHRVAKFVASYMIY--F--NKLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHHGGG--C--SSCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH--h--CCCCEEEECCccccCcHHHHHHHHhhc
Confidence 34445555555544433 2 2599999999988 7799999988765
No 144
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=37.10 E-value=1.6e+02 Score=32.52 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=30.2
Q ss_pred CcCeEEEEecCCCCHHHHHHHHHHHHHcCCCeeEE
Q 005099 208 SVTKAVVTVPAYFNDSQRTATKDAGRIAGLDVLRI 242 (714)
Q Consensus 208 ~v~~~VITVPa~f~~~qR~~l~~Aa~~AGl~~~~l 242 (714)
+-..+++.||..++..+-.++.+++...|+++...
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~~~ 161 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQITGV 161 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCcEEEE
Confidence 34579999999999999999999999999987653
No 145
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=36.71 E-value=23 Score=32.79 Aligned_cols=18 Identities=33% Similarity=0.499 Sum_probs=16.3
Q ss_pred eEEEEEcCccceEEEEEE
Q 005099 77 KVVGIDLGTTNSAVAAME 94 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~ 94 (714)
.|+|||.|++++..++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 689999999999999874
No 146
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=36.25 E-value=69 Score=34.97 Aligned_cols=24 Identities=29% Similarity=0.638 Sum_probs=21.2
Q ss_pred CceEEEEEeCCcceEEEEEEEcCc
Q 005099 260 NETILVFDLGGGTFDVSVLEVGDG 283 (714)
Q Consensus 260 ~~~vLVvD~GgGT~Dvsv~~~~~~ 283 (714)
...+|.+|+||.++-+.++++.+.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESS
T ss_pred ceEEEEEEecCCeEEEEEEEECCC
Confidence 368999999999999999999754
No 147
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=35.68 E-value=67 Score=33.75 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCCCchh-HHHHHHhhcCCC----CCcCCCChhHHHhHHHHHHh
Q 005099 402 DLDEVILVGGSTRIPA-VQELVKKMTGRE----PNVTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 402 ~i~~VvLvGGssrip~-v~~~l~~~fg~~----~~~~~np~eaVA~GAa~~aa 449 (714)
+++.|+|.||.+..+. +.+.|++.+... +......+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999987544 778888777432 11122334689999998764
No 148
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=35.42 E-value=2e+02 Score=24.16 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 005099 630 VKGKVEGKLKELKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 674 (714)
Q Consensus 630 ~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~i~~~~~~~ 674 (714)
++..+...|++-.+-++. ..+.++.+++.++.....+...+|..
T Consensus 67 ~~~ea~~~L~~~~e~ie~-~i~~le~~~~~l~~~l~~lk~~l~~~ 110 (117)
T 2zqm_A 67 TKDKAVAELKEKIETLEV-RLNALERQEKKLNEKLKELTAQIQSA 110 (117)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555543 36677788888888888888887764
No 149
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=35.21 E-value=2e+02 Score=24.38 Aligned_cols=81 Identities=17% Similarity=0.345 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHH-HHh-h-hhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcC----CHHHH
Q 005099 581 VQRMVQEAERFAKEDKEKRDAIDT-KNQ-A-DSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKDAIAEG----STQAM 653 (714)
Q Consensus 581 i~~~~~~~~~~~~~d~~~~~~~~~-~n~-l-E~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~wl~~~----~~~~~ 653 (714)
+.|+.++...|..+-....++.+. +.+ - +.-|-.-+..|.+.. .+-++-+.+|...+.+++++|..+ +.++|
T Consensus 16 vkRL~KE~~~Y~kE~~~q~~riek~k~e~~Dey~iKkq~evl~Et~-~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~ 94 (108)
T 1h7c_A 16 VRRLVKERVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESR-MMIPDCQRRLEAAYLDLQRILENEKDLEEAEEY 94 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHH
Confidence 456666666665554444433322 221 2 223333444444432 344677789999999999999843 46777
Q ss_pred HHHHHHHHH
Q 005099 654 KDTMAALNQ 662 (714)
Q Consensus 654 ~~~~~~l~~ 662 (714)
....+-|..
T Consensus 95 ~~Ake~l~~ 103 (108)
T 1h7c_A 95 KEARLVLDS 103 (108)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766665543
No 150
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=34.94 E-value=2.3e+02 Score=29.74 Aligned_cols=46 Identities=17% Similarity=0.080 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCC-chhHHHHHHhhc
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTR-IPAVQELVKKMT 426 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssr-ip~v~~~l~~~f 426 (714)
.++-+..++.+.|-...... ..+|.|+++||-+. .+.|++.+.+.+
T Consensus 293 A~d~f~yri~k~Iga~aa~L----g~vDaIVfTGGIgens~~vR~~i~~~l 339 (391)
T 3r9p_A 293 AYSVFTHRLRKYIGAYLAVL----GHTDVISFTAGIGENDAAVRRDAVSGM 339 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCCEEEECcccccCCHHHHHHHHHHH
Confidence 34444556665555554443 25899999999886 698999988765
No 151
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=33.35 E-value=85 Score=31.79 Aligned_cols=49 Identities=31% Similarity=0.284 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCCc-----hhHHHHHHhhcCCC-------CCcCCCChhHHHhHHHHHHhH
Q 005099 402 DLDEVILVGGSTRI-----PAVQELVKKMTGRE-------PNVTVNPDEVVALGAAVQAGV 450 (714)
Q Consensus 402 ~i~~VvLvGGssri-----p~v~~~l~~~fg~~-------~~~~~np~eaVA~GAa~~aa~ 450 (714)
+++.|+|-||.+.. +.+++.+++.+... +....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 46789999998875 35666676665211 112224578899999988753
No 152
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=33.15 E-value=55 Score=28.32 Aligned_cols=43 Identities=12% Similarity=0.236 Sum_probs=33.3
Q ss_pred eEEEEEecC-CceEEEEEEEcCCCceeeeEEccCCCCChHHHHHHHHHHHH
Q 005099 541 IEVKFDIDA-NGILSVSAVDKGTGKKQDITITGASTLPNDEVQRMVQEAER 590 (714)
Q Consensus 541 i~v~f~id~-~gil~v~a~~~~t~~~~~i~i~~~~~l~~~ei~~~~~~~~~ 590 (714)
..+.|.+|. .|.+.|++.|..||+.. ..++.+++-++.+.+.+
T Consensus 56 ~~L~F~vdee~~~~vVkVvD~~TgEVI-------RqIPpEe~L~l~~~l~e 99 (117)
T 2hc5_A 56 VHLKFELHDKLNEYYVKVIEDSTNEVI-------REIPPKRWLDFYAAMTE 99 (117)
T ss_dssp CCEEEEEEEETTEEEEEEEETTTTEEE-------EEECHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCcEEEEEEECCCCcEE-------EeCChHHHHHHHHHHHH
Confidence 468888887 68899999999999864 24678888777766554
No 153
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=31.72 E-value=2.9e+02 Score=29.32 Aligned_cols=47 Identities=21% Similarity=0.188 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCC-CchhHHHHHHhhc
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGST-RIPAVQELVKKMT 426 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGss-rip~v~~~l~~~f 426 (714)
.++-+..++.+.|-......+ ..+|.|+++||-. +.+.||+.+.+.+
T Consensus 317 A~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 317 AMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp HHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHHHHHHhhc
Confidence 344445566655555444322 3589999999998 7999999987765
No 154
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=31.66 E-value=2.7e+02 Score=25.45 Aligned_cols=54 Identities=11% Similarity=0.190 Sum_probs=25.3
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 005099 601 AIDTKNQADSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKDAIAEGSTQAMKDTMAALNQEVMQ 666 (714)
Q Consensus 601 ~~~~~n~lE~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~ 666 (714)
..+.|..|+-++.+++..+. .-.++-|+++...++++.+ ......++|+..+.|
T Consensus 108 ~EelR~~l~p~~~el~~~l~----~~~EelR~kl~P~~eeL~~--------~~~~~~eeLr~kL~p 161 (165)
T 1gs9_A 108 MEDVRGRLVQYRGEVQAMLG----QSTEELRVRLASHLRKLRK--------RLLRDADDLQKRLAV 161 (165)
T ss_dssp HHHHHHHHHHHHHHHHTSTT----CCCHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH--------HHHhhHHHHHHHhhh
Confidence 33444444444444443333 2345556666666655532 333444455544444
No 155
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=31.18 E-value=31 Score=34.52 Aligned_cols=20 Identities=30% Similarity=0.640 Sum_probs=18.0
Q ss_pred EEEEEcCccceEEEEEECCe
Q 005099 78 VVGIDLGTTNSAVAAMEGGK 97 (714)
Q Consensus 78 vIGID~GTt~s~va~~~~g~ 97 (714)
++.||.|+|+++.+++++++
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 68999999999999998764
No 156
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=30.94 E-value=45 Score=33.78 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCC
Q 005099 377 LCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRE 429 (714)
Q Consensus 377 l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~ 429 (714)
+.+...+.+.+.++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 344556677888999999999999999999999987664 45678888753
No 157
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=30.02 E-value=1.2e+02 Score=32.82 Aligned_cols=25 Identities=20% Similarity=0.497 Sum_probs=21.7
Q ss_pred CceEEEEEeCCcceEEEEEEEcCce
Q 005099 260 NETILVFDLGGGTFDVSVLEVGDGV 284 (714)
Q Consensus 260 ~~~vLVvD~GgGT~Dvsv~~~~~~~ 284 (714)
...+|.+|+||.++-+.++...+..
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTE
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCe
Confidence 4678999999999999999987654
No 158
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=29.94 E-value=2.6e+02 Score=33.77 Aligned_cols=16 Identities=13% Similarity=0.044 Sum_probs=8.8
Q ss_pred ccCCeEEEEEcCccce
Q 005099 73 VVNEKVVGIDLGTTNS 88 (714)
Q Consensus 73 ~~~~~vIGID~GTt~s 88 (714)
+..+..|=|.|+.+..
T Consensus 218 SRFGK~i~i~F~~~g~ 233 (1080)
T 2dfs_A 218 SRFGKYIEIGFDKRYR 233 (1080)
T ss_dssp ECSEEEEEEEECTTCC
T ss_pred cccceeEEEEECCCCC
Confidence 3455566666655543
No 159
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.90 E-value=21 Score=35.93 Aligned_cols=67 Identities=7% Similarity=-0.103 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHh
Q 005099 379 SDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 379 ~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa 449 (714)
..++++..+.+-..+ ...+ ..+++.|+|.||-+.. +.+.|++.+..+......+..+.++||++++.
T Consensus 211 ~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 344455544444444 2222 1256789998988765 55666666643211222345778899998764
No 160
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=28.56 E-value=1.8e+02 Score=22.75 Aligned_cols=37 Identities=14% Similarity=0.163 Sum_probs=22.1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhcc
Q 005099 588 AERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGD 624 (714)
Q Consensus 588 ~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~~~~~ 624 (714)
.++....|...++......+.|..|-.++..|..|..
T Consensus 32 ~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 32 IEELRQRDALIDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445555656666555566666666666666665544
No 161
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=28.48 E-value=1.1e+02 Score=30.99 Aligned_cols=20 Identities=25% Similarity=0.215 Sum_probs=17.6
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 005099 76 EKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~ 95 (714)
.+++|||+|.|++.+++++.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~ 22 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE 22 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECcceeEEEEEEC
Confidence 47899999999999998853
No 162
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=28.47 E-value=95 Score=33.11 Aligned_cols=44 Identities=25% Similarity=0.345 Sum_probs=36.9
Q ss_pred cCeEEEEecCCCCHHHHHHHHHHHHHcCCCeeEEechhHH-HHHHcccc
Q 005099 209 VTKAVVTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTA-ASLAYGFE 256 (714)
Q Consensus 209 v~~~VITVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~A-AAlay~~~ 256 (714)
+.++|++.|..-+ -.+.-||.++|.+.+.-+--..| ||++||.+
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTe 198 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTE 198 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCS
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCC
Confidence 4689999998222 46889999999999999999998 78999976
No 163
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=27.62 E-value=1e+02 Score=34.79 Aligned_cols=57 Identities=21% Similarity=0.355 Sum_probs=46.9
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHH
Q 005099 366 DTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVK 423 (714)
Q Consensus 366 ~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~ 423 (714)
.+.||..+++++.. ---.+..-++-.|++++++.++|+.|+|.||+..---+.+.+.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 48899999998643 2335667778889999999999999999999999888887765
No 164
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=27.45 E-value=3.6e+02 Score=25.11 Aligned_cols=60 Identities=18% Similarity=0.398 Sum_probs=36.8
Q ss_pred CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Q 005099 574 STLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKD 643 (714)
Q Consensus 574 ~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 643 (714)
..|++|--.++++.+.++.++-+ ...|| .--++.+.|..... +++++..+..+.++.+-+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aK-----vaiRn----iRrda~~~lKk~~k-iseD~~k~~e~~iQkltd 164 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEAR-----VRVRN----VRREAKEMIEELEG-ISEDEKKRALERLQKLTD 164 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHH-----HHHHH----HHHHHHHHHHHSTT-CCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-----HHHHH----HHHHHHHHHHHhcC-CChhHHHHHHHHHHHHHH
Confidence 56899888888887776654432 12222 22223333433333 899998888888888743
No 165
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=27.19 E-value=37 Score=34.60 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=26.9
Q ss_pred cCCCeeEEechhHHHHHHccccc-CCCceEEEEEeCCcceEEEEE
Q 005099 235 AGLDVLRIINEPTAASLAYGFEK-KNNETILVFDLGGGTFDVSVL 278 (714)
Q Consensus 235 AGl~~~~li~Ep~AAAlay~~~~-~~~~~vLVvD~GgGT~Dvsv~ 278 (714)
.|++ +.+.|+..|||++..... ....+++++-+|.| +-..++
T Consensus 107 ~~~p-v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtG-iG~gii 149 (310)
T 3htv_A 107 LNCP-VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTG-MGFAVW 149 (310)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEeeHHHHHHHHHHhhcccCCceEEEEEecee-EEEEEE
Confidence 4776 589999999987543221 22456777778766 344444
No 166
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=26.73 E-value=3.4e+02 Score=26.25 Aligned_cols=44 Identities=11% Similarity=0.159 Sum_probs=34.5
Q ss_pred CChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 005099 576 LPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKE 621 (714)
Q Consensus 576 l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~~ 621 (714)
-+-.+++....+...|+..++ ..+..-|+.|+..+..++.+|..
T Consensus 41 ~sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~ 84 (235)
T 2odv_A 41 SSFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQA 84 (235)
T ss_dssp SSHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHc
Confidence 345677777778888877654 66778899999999999999985
No 167
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=26.44 E-value=58 Score=33.00 Aligned_cols=48 Identities=15% Similarity=0.155 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCC
Q 005099 379 SDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRE 429 (714)
Q Consensus 379 ~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~ 429 (714)
+-..+.+...++++|+++++++++|+.|++-+.++++ -+.+.+.||.+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3445677888999999999999999999999987654 45677788753
No 168
>3zsu_A TLL2057 protein, cyanoq; photosystem II assembly, photosynthesis, extrinsic protein; 1.60A {Thermosynechococcus elongatus}
Probab=26.04 E-value=3.3e+02 Score=23.83 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=47.0
Q ss_pred CCCChHHHHHHHHHHHHHHHhhHHHHHH---------HHHHHhhhhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q 005099 574 STLPNDEVQRMVQEAERFAKEDKEKRDA---------IDTKNQADSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKDA 644 (714)
Q Consensus 574 ~~l~~~ei~~~~~~~~~~~~~d~~~~~~---------~~~~n~lE~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~w 644 (714)
...|+++|+.+..-.+.+.+..+..-+. .+.+|-+-.=+.++|..|......+.+.++.+......++.+-
T Consensus 13 ptysp~~i~~iq~y~~~i~~~r~Rl~eL~~lI~~~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~ 92 (130)
T 3zsu_A 13 PTYSELQITRIQDYLRDIEKNAERFADLEVSVAKGDWQEARNIMRGPLGEMLMDMRALNRNLLAKDQPTPTALTRALTDD 92 (130)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHTSCGGGSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHhchHHHHHHHHHHHHHhcCHhhHHHHHHHHHHHHHH
Confidence 3467777777665555443322221221 1334444444456666665544555666666666666665555
Q ss_pred Hhc-------CC----HHHHHHHHHHHHHHHH
Q 005099 645 IAE-------GS----TQAMKDTMAALNQEVM 665 (714)
Q Consensus 645 l~~-------~~----~~~~~~~~~~l~~~~~ 665 (714)
|.. .| ...|++....+..+++
T Consensus 93 L~~LD~AA~~~n~~~a~k~Y~~a~adfdafl~ 124 (130)
T 3zsu_A 93 FLKIDQGADLDSVTVAQEGFREAEADFKAYLN 124 (130)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 543 24 3444555555554443
No 169
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=25.86 E-value=4.3e+02 Score=25.11 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=38.2
Q ss_pred CCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Q 005099 574 STLPNDEVQRMVQEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKD 643 (714)
Q Consensus 574 ~~l~~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~lE~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 643 (714)
+.|++|--.++++.+.++.++-+ ...||--......++....+ ..+++++..+..+.++.+-+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aK-----vaIRniRrda~~~lKk~~K~--~~isEDe~k~~e~eiQklTd 189 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAK-----VAVRNVRRDGNDDLKKLEKA--GEITEDDLRGYTEDIQKETD 189 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH--TSSCHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhccc--CCCCHHHHHHHHHHHHHHHH
Confidence 56899988888887776655432 23333222233333333322 35889998888888877744
No 170
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=25.31 E-value=62 Score=32.48 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCC
Q 005099 380 DLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRE 429 (714)
Q Consensus 380 ~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~ 429 (714)
...+.+.+.++++|+++++++++|+.|++-|.++++ -+.+.+.||..
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 445677788999999999999999999999987764 34677778753
No 171
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=25.15 E-value=54 Score=34.45 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 005099 76 EKVVGIDLGTTNSAVAAMEGG 96 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~~g 96 (714)
..++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 368999999999999998865
No 172
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=24.30 E-value=7.2 Score=39.54 Aligned_cols=59 Identities=10% Similarity=0.030 Sum_probs=32.6
Q ss_pred cCeEEEEecCCCCHHHHHHHHHHHH-HcCC-CeeEEechhHHHHHHcccccCCCceEEEEEeCCcc
Q 005099 209 VTKAVVTVPAYFNDSQRTATKDAGR-IAGL-DVLRIINEPTAASLAYGFEKKNNETILVFDLGGGT 272 (714)
Q Consensus 209 v~~~VITVPa~f~~~qR~~l~~Aa~-~AGl-~~~~li~Ep~AAAlay~~~~~~~~~vLVvD~GgGT 272 (714)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+-.+|+++-. .....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~----g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC----GQKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT----TTSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc----CCCCcEEEEeCCCh
Confidence 345778888763 221123444333 3454 35799999999999653 12233444477776
No 173
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=24.04 E-value=59 Score=26.51 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=25.4
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCe
Q 005099 212 AVVTVPAYFNDSQRTATKDAGRIAGLDV 239 (714)
Q Consensus 212 ~VITVPa~f~~~qR~~l~~Aa~~AGl~~ 239 (714)
-.++.|+.++..+|..+.+.|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4789999999999999999999999854
No 174
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=23.94 E-value=2e+02 Score=24.26 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHH-HHh-h--hhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcC-CHHHHHH
Q 005099 581 VQRMVQEAERFAKEDKEKRDAIDT-KNQ-A--DSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKDAIAEG-STQAMKD 655 (714)
Q Consensus 581 i~~~~~~~~~~~~~d~~~~~~~~~-~n~-l--E~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~wl~~~-~~~~~~~ 655 (714)
+.|+.++...|..+-....++.+. +.+ - +.-|-.-+..|.+.. .+-++-+.+|...+.+++++|.+. +.++|..
T Consensus 13 vkRL~KE~~~Y~kE~~~q~~riek~k~~~~~dey~iKkq~evl~Et~-~mipd~~~Rl~~a~~~L~~~l~~~~~~ee~~~ 91 (106)
T 1qsd_A 13 LKRLTKEEGYYQQELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTK-RLLPTLYEKIREFKEDLEQFLKTYQGTEDVSD 91 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhccCcHHHHH
Confidence 456666666666554444444333 222 1 222222333333322 233566779999999999999742 3445544
Q ss_pred HHHHHH
Q 005099 656 TMAALN 661 (714)
Q Consensus 656 ~~~~l~ 661 (714)
..+-|.
T Consensus 92 Ake~l~ 97 (106)
T 1qsd_A 92 ARSAIT 97 (106)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 175
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=23.75 E-value=91 Score=30.55 Aligned_cols=48 Identities=10% Similarity=0.210 Sum_probs=28.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHHH----hcc---CCCHHHHHHHHHHHHHHHHHHhc
Q 005099 600 DAIDTKNQADSVVYQTEKQLKE----LGD---KVPAEVKGKVEGKLKELKDAIAE 647 (714)
Q Consensus 600 ~~~~~~n~lE~~i~~~~~~l~~----~~~---~~~~~~~~~~~~~l~~~~~wl~~ 647 (714)
...+.+..|..|..++|.++.. +.. -..++-+.++...++++.+|+..
T Consensus 133 ~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p 187 (243)
T 2a01_A 133 KLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGA 187 (243)
T ss_dssp HHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcch
Confidence 3445555666666665555543 111 12356677778888888888864
No 176
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=23.63 E-value=36 Score=38.51 Aligned_cols=48 Identities=19% Similarity=0.348 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCC--CCCCEEEEEcCCCCchhHHHHHHhhcC
Q 005099 380 DLLDRLKTPVETSLRDAKLSF--KDLDEVILVGGSTRIPAVQELVKKMTG 427 (714)
Q Consensus 380 ~l~~~i~~~i~~~L~~a~~~~--~~i~~VvLvGGssrip~v~~~l~~~fg 427 (714)
||=+.|++-|..+......++ .=-+.|++|||++.+|.+.-.|.+...
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 444455555554443222211 123689999999999999999998873
No 177
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=23.59 E-value=1.5e+02 Score=24.22 Aligned_cols=54 Identities=24% Similarity=0.382 Sum_probs=32.9
Q ss_pred ceeeeeecccccccccCceeeEEEEeCCCCCCCCCCeeEEEEEecCCceEEEEEEEcCCCceeeeEEc
Q 005099 504 SVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITIT 571 (714)
Q Consensus 504 ~~~i~i~~ge~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~f~id~~gil~v~a~~~~t~~~~~i~i~ 571 (714)
.-.+.|+|.........-.-|-|.|+++++. ...|.|.|+++| ..|+++.+++.
T Consensus 26 ~A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~e-adG~~~~~~vp 79 (90)
T 3fcg_A 26 QARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHE-SDGTKQVFTVP 79 (90)
T ss_dssp SEEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEEC-TTSCEEEEEEE
T ss_pred CcEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEE-CCCCEEEEEEC
Confidence 4566777765555455555688999887763 335667777766 34666665554
No 178
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=23.34 E-value=59 Score=32.56 Aligned_cols=22 Identities=14% Similarity=0.289 Sum_probs=19.1
Q ss_pred CeEEEEEcCccceEEEEEE-CCe
Q 005099 76 EKVVGIDLGTTNSAVAAME-GGK 97 (714)
Q Consensus 76 ~~vIGID~GTt~s~va~~~-~g~ 97 (714)
.+.+.||.|+|++++++++ +++
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCE
Confidence 4789999999999999998 553
No 179
>3ls0_A SLL1638 protein, PSBQ; photosynthesis, four helix bundle; 1.80A {Synechocystis SP} PDB: 3ls1_A
Probab=23.21 E-value=3.8e+02 Score=23.53 Aligned_cols=74 Identities=12% Similarity=0.128 Sum_probs=36.7
Q ss_pred CCCChHHHHHHHHHHHHHHHhhHHHHH-HH---------HHHHhhhhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Q 005099 574 STLPNDEVQRMVQEAERFAKEDKEKRD-AI---------DTKNQADSVVYQTEKQLKELGDKVPAEVKGKVEGKLKELKD 643 (714)
Q Consensus 574 ~~l~~~ei~~~~~~~~~~~~~d~~~~~-~~---------~~~n~lE~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 643 (714)
...|.++|+.+..-.+.+.+..+..-+ .. +.+|-+-.=+.++|..|......+.+.++.+......++.+
T Consensus 15 ptysp~~i~~Iq~y~~~i~~ar~Rl~e~L~~lI~~~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~ 94 (133)
T 3ls0_A 15 TTYSPEKIAQLQVYVNPIAVARDGMEKRLQGLIADQNWVDTQTYIHGPLGQLRRDMLGLASSLLPKDQDKAKTLAKEVFG 94 (133)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHTTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcchHHHHHHHhchHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence 346778877776655555433222222 11 22222222223344444433344556677676666666666
Q ss_pred HHhc
Q 005099 644 AIAE 647 (714)
Q Consensus 644 wl~~ 647 (714)
-|..
T Consensus 95 ~L~~ 98 (133)
T 3ls0_A 95 HLER 98 (133)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 180
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=22.81 E-value=93 Score=31.51 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=31.9
Q ss_pred CEEEEEcCCCCchhHHHHHHhhcCCCCCcCCCChhHHHhHHHHHHh
Q 005099 404 DEVILVGGSTRIPAVQELVKKMTGREPNVTVNPDEVVALGAAVQAG 449 (714)
Q Consensus 404 ~~VvLvGGssrip~v~~~l~~~fg~~~~~~~np~eaVA~GAa~~aa 449 (714)
..|.|+|........+..|+. +|.++ ...++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~-~~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREV-SAVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCE-EEEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCc-eecCHHHHHHHHHHHHHH
Confidence 569999999888888888864 56533 344888988888765443
No 181
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.47 E-value=52 Score=34.01 Aligned_cols=39 Identities=18% Similarity=0.391 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEE-CCe--eEEE--eCCCCCccceEEEE
Q 005099 77 KVVGIDLGTTNSAVAAME-GGK--PTIV--TNAEGQRTTPSVVA 115 (714)
Q Consensus 77 ~vIGID~GTt~s~va~~~-~g~--~~ii--~n~~g~~~~PS~V~ 115 (714)
+++|+|+|..|++++... +|. +..+ +-|.|....+..+.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l~ 44 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVLK 44 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC----------------
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHHH
Confidence 489999999999999875 554 3222 45777555555443
No 182
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=21.86 E-value=1.7e+02 Score=29.78 Aligned_cols=21 Identities=33% Similarity=0.389 Sum_probs=18.1
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 005099 75 NEKVVGIDLGTTNSAVAAMEG 95 (714)
Q Consensus 75 ~~~vIGID~GTt~s~va~~~~ 95 (714)
...++|||+|+|++.+++++.
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~ 49 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSM 49 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECCCEEEEEEECC
Confidence 357999999999999998864
No 183
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=21.79 E-value=84 Score=32.14 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCC
Q 005099 380 DLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRE 429 (714)
Q Consensus 380 ~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~ 429 (714)
-..+.+.+.++++|+++++++++|+.|+.-+++.++ -+.+.+.||.+
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 345677788999999999999999999999887654 34677777654
No 184
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=21.48 E-value=1.2e+02 Score=32.93 Aligned_cols=24 Identities=42% Similarity=0.793 Sum_probs=20.9
Q ss_pred CceEEEEEeCCcceEEEEEEEcCc
Q 005099 260 NETILVFDLGGGTFDVSVLEVGDG 283 (714)
Q Consensus 260 ~~~vLVvD~GgGT~Dvsv~~~~~~ 283 (714)
...+|.+|+||.+|-|.++++.++
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC-
T ss_pred ceEEEEEEecCceEEEEEEEECCC
Confidence 468999999999999999999754
No 185
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=21.45 E-value=85 Score=31.55 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEEcCCCCchhHHHHHHhhcCCC
Q 005099 379 SDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRE 429 (714)
Q Consensus 379 ~~l~~~i~~~i~~~L~~a~~~~~~i~~VvLvGGssrip~v~~~l~~~fg~~ 429 (714)
+...+.+...++++|+++++++++|+.|++-++++++ -+.+.+.||..
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 255 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 3455677888999999999999999999999887654 34567777643
No 186
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=20.94 E-value=2e+02 Score=23.66 Aligned_cols=15 Identities=20% Similarity=0.235 Sum_probs=6.2
Q ss_pred HhhhhHHHHHHHHHH
Q 005099 606 NQADSVVYQTEKQLK 620 (714)
Q Consensus 606 n~lE~~i~~~~~~l~ 620 (714)
++|..-+..+...|.
T Consensus 12 ~el~~WL~~~e~~l~ 26 (119)
T 3uun_A 12 EEVLSWLLSAEDTLQ 26 (119)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 334444444444443
No 187
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=20.55 E-value=1.8e+02 Score=31.16 Aligned_cols=29 Identities=34% Similarity=0.628 Sum_probs=24.0
Q ss_pred CceEEEEEeCCcceEEEEEEEcCceEEEEE
Q 005099 260 NETILVFDLGGGTFDVSVLEVGDGVFEVLS 289 (714)
Q Consensus 260 ~~~vLVvD~GgGT~Dvsv~~~~~~~~~vl~ 289 (714)
...+|.+|+||.+|-|.++++.++ +++..
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 467999999999999999999766 54443
Done!