Query 005100
Match_columns 714
No_of_seqs 180 out of 577
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 15:21:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005100.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005100hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bzk_A Protein (BAND 3 anion t 99.7 2.2E-19 7.4E-24 138.1 -0.9 43 17-61 1-43 (43)
2 1bnx_A Protein (BAND 3); human 99.5 3E-15 1E-19 109.5 0.7 34 17-61 1-34 (34)
3 1bts_A BAND 3 anion transport 98.7 5.7E-09 2E-13 72.2 2.6 26 66-91 1-26 (26)
4 1btq_A BAND 3 anion transport 98.7 4.1E-09 1.4E-13 72.8 0.8 26 35-60 1-26 (26)
5 1bh7_A BAND 3; membrane protei 98.6 1.3E-09 4.4E-14 79.4 -1.9 33 509-547 1-33 (33)
6 3qe7_A Uracil permease; uracil 98.2 5.2E-05 1.8E-09 83.5 20.3 255 40-355 25-286 (429)
7 1qle_D Cytochrome AA3, ccytoch 20.0 90 0.0031 23.8 3.4 25 120-144 19-43 (43)
8 2xov_A Rhomboid protease GLPG; 17.9 3.1E+02 0.01 25.9 7.5 62 41-104 58-119 (181)
9 1m56_D Cytochrome C oxidase; m 14.7 1.4E+02 0.0049 23.5 3.5 25 120-144 27-51 (51)
10 2l8s_A Integrin alpha-1; trans 11.4 1.8E+02 0.0063 23.3 3.2 20 288-307 6-25 (54)
No 1
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=99.72 E-value=2.2e-19 Score=138.06 Aligned_cols=43 Identities=35% Similarity=0.612 Sum_probs=40.4
Q ss_pred hcccCcccccccccccCceeechhHHHHHhhhhhHHHHhhchhhh
Q 005100 17 GRLKCYKQDWTGGFRAGFRILAPTTYIFFASAIPVISFGEQLERN 61 (714)
Q Consensus 17 rR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIAFG~ll~~~ 61 (714)
||+|||+|||+||+| +||+++++||||||++||||||++|+++
T Consensus 1 rR~p~Y~SD~~dg~~--~~~laa~~fiyFa~l~PaIaFG~ll~~~ 43 (43)
T 1bzk_A 1 XRYPYYLSDITDAFS--PQVLAAVIFIYFAALSPAITFGGLLGEK 43 (43)
T ss_dssp -CCSTTHHHHTTSSC--SHHHHHHHHHHHHTSTTTTTSSCCCCCC
T ss_pred CCCcccHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 799999999999999 7999999999999999999999999874
No 2
>1bnx_A Protein (BAND 3); human erythrocyte anion transporter, transmembrane, synthetic peptide, electron transport; NMR {Synthetic} SCOP: j.35.1.1
Probab=99.49 E-value=3e-15 Score=109.50 Aligned_cols=34 Identities=35% Similarity=0.629 Sum_probs=31.5
Q ss_pred hcccCcccccccccccCceeechhHHHHHhhhhhHHHHhhchhhh
Q 005100 17 GRLKCYKQDWTGGFRAGFRILAPTTYIFFASAIPVISFGEQLERN 61 (714)
Q Consensus 17 rR~p~Y~SDwtDg~~~~~~~last~fifFA~llPaIAFG~ll~~~ 61 (714)
||+|||+|||+| ++||||||++|+||||++|+++
T Consensus 1 rR~p~Y~SD~~d-----------~~fiyFa~l~PaIaFg~ll~~~ 34 (34)
T 1bnx_A 1 XRYPYYLSDITD-----------VIFIYFAALSPAITFGGLLGEK 34 (34)
T ss_dssp -CCSTTTHHHHH-----------HHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCcccHHHHHH-----------HHHHHHHHHHHHHHHHHHHccC
Confidence 799999999999 9999999999999999999863
No 3
>1bts_A BAND 3 anion transport protein; transmembrane protein; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 1btt_A
Probab=98.70 E-value=5.7e-09 Score=72.17 Aligned_cols=26 Identities=27% Similarity=0.438 Sum_probs=20.8
Q ss_pred cchHHHHHhhhHhHHHHHHhcCccee
Q 005100 66 LTAVQTLASTALCGIIHSIVGGQPLL 91 (714)
Q Consensus 66 ~gv~E~LlStai~Giifslf~GQPL~ 91 (714)
+||+|+|+||++||++|++||||||+
T Consensus 1 ~gv~E~i~s~ai~Gi~f~lf~gQPL~ 26 (26)
T 1bts_A 1 XGVSELLISTAVQGILFALLGAXXXX 26 (26)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTC----
T ss_pred CchhHHHHHHHHHHHHHHHHhcccCC
Confidence 58999999999999999999999995
No 4
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=98.65 E-value=4.1e-09 Score=72.81 Aligned_cols=26 Identities=35% Similarity=0.740 Sum_probs=24.4
Q ss_pred eeechhHHHHHhhhhhHHHHhhchhh
Q 005100 35 RILAPTTYIFFASAIPVISFGEQLER 60 (714)
Q Consensus 35 ~~last~fifFA~llPaIAFG~ll~~ 60 (714)
||+++++||||||++|+||||++|++
T Consensus 1 q~laa~~FlyFa~l~paIaFGgLl~~ 26 (26)
T 1btq_A 1 XVLAAVIFIYFAALSPAITFGXXXXX 26 (26)
T ss_pred ChHHHHHHHHHHHHcchhccccccCC
Confidence 68999999999999999999999874
No 5
>1bh7_A BAND 3; membrane protein, cytoplasmic loop, anion exchange protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=98.65 E-value=1.3e-09 Score=79.38 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=28.1
Q ss_pred chHHHHHHHhhcCCCCccccccCCccccccccCccchhh
Q 005100 509 NQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAA 547 (714)
Q Consensus 509 nQf~eRillLf~~~~~~y~~~~~~~~~yvr~Vp~~~Ihl 547 (714)
+|||||++|+|||+|+ +|+.+|+|+||++|||+
T Consensus 1 iQ~~~Ri~L~fmp~k~------~P~~~Yvr~Vp~~r~Hl 33 (33)
T 1bh7_A 1 IQLFDRILLLFKPPKY------HPDVPYVKRVKTWRMHL 33 (33)
T ss_dssp CCCTTTTCC-CCCSSC------CCC-CCCCTTHHHHHTC
T ss_pred CcHHHHHHHHcCCccc------CCCCceEEEcceeeeeC
Confidence 5999999999999886 37889999999999995
No 6
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=98.23 E-value=5.2e-05 Score=83.50 Aligned_cols=255 Identities=15% Similarity=0.089 Sum_probs=141.9
Q ss_pred hHHHHHhhhhhHHHHhhchhhhcCCCcchHHHHHhhhHhHHHHHHhcCcceee-eecCchhHHHHHHHHHHhhhcccccc
Q 005100 40 TTYIFFASAIPVISFGEQLERNTNGALTAVQTLASTALCGIIHSIVGGQPLLI-LGVAEPTVLMYTFMFNFAKDRKDLGE 118 (714)
Q Consensus 40 t~fifFA~llPaIAFG~ll~~~T~g~~gv~E~LlStai~Giifslf~GQPL~I-lGvTGP~~if~~~ly~f~~~~~~lg~ 118 (714)
.+-||-+.+++-+..|. +...++++++++.+++++++|-|+-+ +|++.. |...+....+ ++ .
T Consensus 25 ~lam~~~~v~~PlilGl----------~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfa---fi~~~~~i~~-~g---~ 87 (429)
T 3qe7_A 25 LFAMFGATVLVPVLFHI----------NPATVLLFNGIGTLLYLFICKGKIPAYLGSSFA---FISPVLLLLP-LG---Y 87 (429)
T ss_dssp HHHHHHHHHHHHHTTTS----------CHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGG---GHHHHHHHGG-GC---H
T ss_pred HHHHHHHHHHhHHHhCC----------CHHHHHHHHHHHHHHHHHHcCCCCCeEecChHH---HHHHHHHHHh-cC---H
Confidence 34456566555444442 33579999999999999999999876 887754 3233333333 22 1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHh--cc--cchhhhcccchhhHHHHHHHHHHHHHHHHHHhHhcCCCCCCCCCCCCCCC
Q 005100 119 KLFLAWTGWVCAWTALLLFLLSIL--GA--CSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGIPERENPNQMSLQP 194 (714)
Q Consensus 119 ~~fL~~~~WVgiWtav~l~llai~--na--s~li~~~TRfteEiF~~lIsviFi~eaik~lv~~F~~p~~~~~~~~~~~~ 194 (714)
+.. .=..+.++++.++++.+ .. ..++|+++.-.--.|-++|++..+.-+++... .. . +. ..
T Consensus 88 -~~~---~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~--~~--~--~~--~~--- 152 (429)
T 3qe7_A 88 -EVA---LGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAG--LL--P--AE--GQ--- 152 (429)
T ss_dssp -HHH---HHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHT--SS--C--BT--TB---
T ss_pred -HHH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhcc--cc--C--CC--Cc---
Confidence 122 12567778888888877 44 36788888766666767777766666665431 00 0 00 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcccccccccCccccchhccchhHHHHHHHhhhcccccc-ccCCCCCcccCCCCCCC
Q 005100 195 SWRFGNGMFALVLSFGLLYTGLRSRKARSWRYGSGSLRGFIADYGVPLMVLVWTAVSYIPVN-NVPRGIPRRLFSPNPWS 273 (714)
Q Consensus 195 ~~~~~~~llsliL~~gt~~~a~~l~~~rss~y~~~~vR~~iaDygvpiaVl~~t~vsy~~~~-~vP~g~~~rl~~p~~~~ 273 (714)
+. ..-.+.+++.++.+.+.+.+ +. |+++.-+++.+++++-+.+++..+. +.+. +. ..+|-
T Consensus 153 ---~~-~~~~~~la~~tl~iii~~~~-----~~----kg~~~~~aiLigivvg~~~a~~~G~~d~~~-v~-----~a~~~ 213 (429)
T 3qe7_A 153 ---TP-DSKTIIISITTLAVTVLGSV-----LF----RGFLAIIPILIGVLVGYALSFAMGIVDTTP-II-----NAHWF 213 (429)
T ss_dssp ---CC-CHHHHHHHHHHHHHHHHHHH-----SS----STTTTTHHHHHHHHHHHHHHHHHHHTTSSH-HH-----HSCSS
T ss_pred ---cc-cHHHHHHHHHHHHHHHHHHH-----Hh----cccchhhHHHHHHHHHHHHHHHhcCCCccc-cc-----ccccc
Confidence 00 01223444444444433321 22 3344456889999988888765531 2111 00 01110
Q ss_pred CCCCCCcEEeccCCCCChhHHHHhhhHHHHHHHHHhhhhhhHHHHhhc-ccccCCCCCCccchhHHHHHHhhhhhccCCC
Q 005100 274 PGAYSNWTIVKEMLDVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQ-KEFNLKKPPSYHYDLLLLGFLTILCGLIGIP 352 (714)
Q Consensus 274 p~~~r~W~V~~~~~~vP~~~if~A~iPAlll~iL~F~DhnIss~iaq~-ke~kLkKgsgyH~DLlllGi~t~i~gllGLP 352 (714)
. ...|. ..++.+ .++++.+.+++.-++|+-=+..-+.+ -+.+..|.+..|-.++.-|+-|.++|++|-+
T Consensus 214 ~--lP~~~----~P~f~~----~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~ 283 (429)
T 3qe7_A 214 A--LPTLY----TPRFEW----FAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGST 283 (429)
T ss_dssp C--CCCCC----CCCCCH----HHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred c--ccCCC----CCcccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCC
Confidence 0 00010 011222 33444455666667787543322221 2233446678899999999999999999988
Q ss_pred CCC
Q 005100 353 PSN 355 (714)
Q Consensus 353 w~n 355 (714)
+.+
T Consensus 284 p~T 286 (429)
T 3qe7_A 284 PNT 286 (429)
T ss_dssp CEE
T ss_pred Ccc
Confidence 753
No 7
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=20.02 E-value=90 Score=23.82 Aligned_cols=25 Identities=20% Similarity=0.432 Sum_probs=23.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhcc
Q 005100 120 LFLAWTGWVCAWTALLLFLLSILGA 144 (714)
Q Consensus 120 ~fL~~~~WVgiWtav~l~llai~na 144 (714)
-|+.|.-|.++=++++++++++|++
T Consensus 19 gFi~~~k~gt~~~~~~ll~maif~~ 43 (43)
T 1qle_D 19 GFIKGATWVSILSIAVLVFLALANS 43 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5999999999999999999999974
No 8
>2xov_A Rhomboid protease GLPG; membrane protein, hydrolase, intramembrane protease; HET: BNG; 1.65A {Escherichia coli} PDB: 2ic8_A* 2nrf_A 2xtu_A* 2irv_A* 3b45_A* 2o7l_A* 2xow_A* 3txt_A* 2xtv_A* 3b44_A*
Probab=17.85 E-value=3.1e+02 Score=25.86 Aligned_cols=62 Identities=16% Similarity=0.141 Sum_probs=37.3
Q ss_pred HHHHHhhhhhHHHHhhchhhhcCCCcchHHHHHhhhHhHHHHHHhcCcceeeeecCchhHHHHH
Q 005100 41 TYIFFASAIPVISFGEQLERNTNGALTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVLMYT 104 (714)
Q Consensus 41 ~fifFA~llPaIAFG~ll~~~T~g~~gv~E~LlStai~Giifslf~GQPL~IlGvTGP~~if~~ 104 (714)
..=.+.|...-..||..+++.-+..-=..=.+++...+++...++.+.+ .+|.+|.+.-...
T Consensus 58 ~~Hl~~Nm~~l~~~g~~~E~~~G~~~fl~~yl~~~i~~~l~~~~~~~~~--~vGaSGai~gl~g 119 (181)
T 2xov_A 58 LMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPW--FGGLSGVVYALMG 119 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCSC--CCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCC--ceeHHHHHHHHHH
Confidence 3445667788888999888753321111122345555666666676655 7898887544333
No 9
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=14.71 E-value=1.4e+02 Score=23.49 Aligned_cols=25 Identities=20% Similarity=0.369 Sum_probs=22.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhcc
Q 005100 120 LFLAWTGWVCAWTALLLFLLSILGA 144 (714)
Q Consensus 120 ~fL~~~~WVgiWtav~l~llai~na 144 (714)
-|+.|.-|.++=++++++++++|++
T Consensus 27 gFi~~~k~gt~~~~~~ll~laif~~ 51 (51)
T 1m56_D 27 GFVRMVTWAAVVIVAALIFLALANA 51 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5999999999999999999999974
No 10
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=11.37 E-value=1.8e+02 Score=23.26 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=13.7
Q ss_pred CCChhHHHHhhhHHHHHHHH
Q 005100 288 DVPPLYIVGAFIPATMIAVL 307 (714)
Q Consensus 288 ~vP~~~if~A~iPAlll~iL 307 (714)
.+|+|.|.+|++-|+++..|
T Consensus 6 ~vp~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 6 RVPLWVILLSAFAGLLLLML 25 (54)
T ss_dssp CCCTHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHH
Confidence 47888888777766655443
Done!