Your job contains 1 sequence.
>005101
MKIALWNVLNLMMESILEKLSLDMVLILVIGRIHMKRAMTTTVMRVRMMTTTVMRGEDEN
NHNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETLSKEVQDS
IEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDRF
VTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKQEGQRKDNSGCEGIENEDES
AVEERRLKKLSLRAKFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRK
QMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNV
GYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHC
LATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFK
KTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM
RGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRK
FNPLVIPKSLQAALPFESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNEK
MKKRKLKQQHRKKEIEAERAKDEQLTRKRQREERRERYREQDKLMKKIRRHSEV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005101
(714 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033050 - symbol:AT1G06720 species:3702 "Arabi... 1451 3.7e-172 2
ZFIN|ZDB-GENE-060720-2 - symbol:bms1l "BMS1-like, ribosom... 1052 2.5e-106 1
UNIPROTKB|E1BPP2 - symbol:BMS1 "Uncharacterized protein" ... 1022 3.5e-105 2
UNIPROTKB|F1PKN2 - symbol:BMS1 "Uncharacterized protein" ... 1006 2.5e-104 2
UNIPROTKB|F1NH69 - symbol:BMS1 "Uncharacterized protein" ... 1028 8.6e-104 1
UNIPROTKB|Q14692 - symbol:BMS1 "Ribosome biogenesis prote... 1017 1.3e-102 1
ASPGD|ASPL0000005995 - symbol:AN6334 species:162425 "Emer... 976 2.8e-98 1
FB|FBgn0036686 - symbol:CG7728 species:7227 "Drosophila m... 950 1.6e-95 1
DICTYBASE|DDB_G0287891 - symbol:bms1l "BMS1-like ribosome... 937 3.8e-94 1
UNIPROTKB|F1RG23 - symbol:BMS1 "Uncharacterized protein" ... 922 1.5e-92 1
UNIPROTKB|E9PTV4 - symbol:Bms1 "Protein Bms1" species:101... 911 3.0e-91 1
POMBASE|SPBC31E1.06 - symbol:bms1 "GTP binding protein Bm... 901 2.5e-90 1
RGD|1308043 - symbol:Bms1 "BMS1 homolog, ribosome assembl... 901 2.5e-90 1
CGD|CAL0002359 - symbol:BMS1 species:5476 "Candida albica... 866 7.4e-89 2
UNIPROTKB|Q5A9Y0 - symbol:BMS1 "Putative uncharacterized ... 866 7.4e-89 2
WB|WBGene00022021 - symbol:Y61A9LA.10 species:6239 "Caeno... 830 1.0e-84 2
SGD|S000006138 - symbol:BMS1 "GTPase required for ribosom... 809 3.6e-80 1
GENEDB_PFALCIPARUM|PFA0330w - symbol:AARP2 "pfAARP2 prote... 497 3.0e-47 2
UNIPROTKB|Q8I275 - symbol:AARP2 "PfAARP2 protein" species... 497 3.0e-47 2
UNIPROTKB|E2QYA6 - symbol:E2QYA6 "Uncharacterized protein... 252 3.6e-18 1
UNIPROTKB|J9NS98 - symbol:TSR1 "Uncharacterized protein" ... 254 2.4e-17 2
UNIPROTKB|F1MSR6 - symbol:TSR1 "Uncharacterized protein" ... 238 1.8e-16 1
UNIPROTKB|Q2NL82 - symbol:TSR1 "Pre-rRNA-processing prote... 229 7.9e-16 2
UNIPROTKB|Q5XGY1 - symbol:tsr1 "Pre-rRNA-processing prote... 227 3.0e-15 1
UNIPROTKB|Q5R434 - symbol:TSR1 "Pre-rRNA-processing prote... 226 3.7e-15 1
UNIPROTKB|F1PXP0 - symbol:F1PXP0 "Uncharacterized protein... 227 1.6e-14 2
MGI|MGI:2144566 - symbol:Tsr1 "TSR1 20S rRNA accumulation... 220 1.7e-14 1
RGD|2322150 - symbol:Tsr1 "TSR1, 20S rRNA accumulation, h... 216 4.6e-14 1
UNIPROTKB|F1NNP8 - symbol:LOC100857289 "Uncharacterized p... 202 2.8e-13 2
ZFIN|ZDB-GENE-030131-3762 - symbol:tsr1 "TSR1, 20S rRNA a... 205 3.0e-13 2
TAIR|locus:2035893 - symbol:AT1G42440 "AT1G42440" species... 175 1.3e-09 1
FB|FBgn0037073 - symbol:CG7338 species:7227 "Drosophila m... 177 1.6e-09 2
POMBASE|SPAC23H4.15 - symbol:SPAC23H4.15 "ribosome biogen... 171 2.7e-08 3
DICTYBASE|DDB_G0278331 - symbol:DDB_G0278331 "Pre-rRNA-pr... 162 2.8e-08 2
SGD|S000002218 - symbol:TSR1 "Protein required for proces... 146 1.8e-06 1
UNIPROTKB|Q61WR2 - symbol:tag-151 "Pre-rRNA-processing pr... 132 5.9e-05 1
WB|WBGene00006497 - symbol:tag-151 species:6239 "Caenorha... 129 0.00027 2
UNIPROTKB|Q19329 - symbol:tag-151 "Pre-rRNA-processing pr... 129 0.00027 2
UNIPROTKB|G4NCG9 - symbol:MGG_01087 "Ribosome biogenesis ... 122 0.00074 1
>TAIR|locus:2033050 [details] [associations]
symbol:AT1G06720 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR000795 InterPro:IPR012948
Pfam:PF00009 Pfam:PF08142 SMART:SM00785 GO:GO:0005525 EMBL:CP002684
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 IPI:IPI00521552
RefSeq:NP_172157.1 UniGene:At.12092 ProteinModelPortal:F4IDR3
SMR:F4IDR3 PRIDE:F4IDR3 EnsemblPlants:AT1G06720.1 GeneID:837182
KEGG:ath:AT1G06720 Uniprot:F4IDR3
Length = 1147
Score = 1451 (515.8 bits), Expect = 3.7e-172, Sum P(2) = 3.7e-172
Identities = 294/504 (58%), Positives = 351/504 (69%)
Query: 217 TGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKF--DVQYDGSESPEE--EMNE 272
TG+ + +D + G E ED+ + + + K +++ +E+ +E E+ E
Sbjct: 643 TGDWSKAALRDKNLGTGGEGEDDELYGDFEDLETGEKHKSHENLESGANENEDEDAEVVE 702
Query: 273 KDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIH 332
+DG Q +E G D++KE E KQ N E NDLDE TR+EL GFRTGTYLR+EIH
Sbjct: 703 RDGNNPR-SQADEPGYADKLKEAQEITKQRNELEYNDLDEETRIELAGFRTGTYLRLEIH 761
Query: 333 DVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRR 392
+VP+EMVE+FDPCHP+LVGGIG GE NVGYMQ RLK+HRW HKKVLK+RDPIIVSIGWRR
Sbjct: 762 NVPYEMVEFFDPCHPILVGGIGFGEDNVGYMQARLKKHRW-HKKVLKTRDPIIVSIGWRR 820
Query: 393 FQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAA 452
+QTIPV+AIEDR+GRHRMLKYTPEHMHCLA+FWGPL PP TG VA QNLSNNQA FRI A
Sbjct: 821 YQTIPVFAIEDRNGRHRMLKYTPEHMHCLASFWGPLVPPNTGFVAFQNLSNNQAGFRITA 880
Query: 453 TAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQ 511
T+VVLEFNH+ +I KKIKLVG PCKI KKTA IKDMFTSDLE+A+ EG I Q
Sbjct: 881 TSVVLEFNHQARIVKKIKLVGTPCKIKKKTAFIKDMFTSDLEIARFEGSSVRTVSGIRGQ 940
Query: 512 PKRKG-----GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIW 566
K+ G + EGIARCTFED+I MSD+VF+R W VE+P+FYNPLTTALQPRDK W
Sbjct: 941 VKKAGKNMLDNKAEEGIARCTFEDQIHMSDMVFLRAWTTVEVPQFYNPLTTALQPRDKTW 1000
Query: 567 QGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR 626
GMKT ELRRE N+ IPVNK+SLYK I R +KFNPL IPK L+ LPF SKPK+IP R
Sbjct: 1001 NGMKTFGELRRELNIPIPVNKDSLYKAIERKQKKFNPLQIPKRLEKDLPFMSKPKNIPKR 1060
Query: 627 KRPLLENRRAVVMEPHERKVHVLFQQLQLIRNEXXXXXXXXXXXXXXEIEAERAKDXXXX 686
KRP LE++RAV+MEP ERK H + QQ QL+++ E EAE+AK+
Sbjct: 1061 KRPSLEDKRAVIMEPKERKEHTIIQQFQLLQHHTMKKKKATDQKKRKEYEAEKAKNEEIN 1120
Query: 687 XXXXXXXXXXXXXXXDKLMKKIRR 710
DK KK RR
Sbjct: 1121 KKRRREERRDRYREEDKQKKKTRR 1144
Score = 244 (91.0 bits), Expect = 3.7e-172, Sum P(2) = 3.7e-172
Identities = 65/161 (40%), Positives = 81/161 (50%)
Query: 87 LTKSSLRRCANLIQLVYGXXXXXXXXXXXXVQXXXXXXXXXXXXFFKPKVEGNK-LREGL 145
L + + ++ NL+Q+VYG FFKPK E +K L GL
Sbjct: 548 LKEIARKKNPNLMQIVYGASSLATPLINEN-HDISDDDESDDEDFFKPKGEQHKNLGGGL 606
Query: 146 DSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQXXXXXXXXXXXX 205
D G VN++DCSK +Y LK+WK++EV ESIRDRF TGDWSKAA R++
Sbjct: 607 DVGYVNSEDCSKFVNYGYLKNWKEKEVCESIRDRFTTGDWSKAALRDKNLGTGGEGEDDE 666
Query: 206 XXXXXXXXXLETGEKQEGQRKDNSGCEGIENEDESA-VEER 245
LETGEK + SG ENEDE A V ER
Sbjct: 667 LYGDFED--LETGEKHKSHENLESGAN--ENEDEDAEVVER 703
>ZFIN|ZDB-GENE-060720-2 [details] [associations]
symbol:bms1l "BMS1-like, ribosome assembly protein
(yeast)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 ZFIN:ZDB-GENE-060720-2 GO:GO:0005525
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:BX248124 IPI:IPI00919984 RefSeq:NP_001104620.2
UniGene:Dr.76844 Ensembl:ENSDART00000053761
Ensembl:ENSDART00000130032 GeneID:553241 KEGG:dre:553241 CTD:553241
NextBio:20880021 Uniprot:E7F349
Length = 1221
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 225/510 (44%), Positives = 307/510 (60%)
Query: 154 DCSKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQXXXXXXXXXXXXXXXXXXXX 213
DCS+ + + W QEE+ SIRD FVTG W +
Sbjct: 661 DCSRFQP-DSSHDWDQEEMLASIRDCFVTGKWEEDKD-------AATLLKEDDELYGDFE 712
Query: 214 XLETGE--KQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKFD-VQYDGSESPEEEM 270
LETGE K + KD + E +++D+ +E + ++ D VQ + + +
Sbjct: 713 DLETGEVHKAKTGNKDKAEEENGDDDDDDDDDEEEEEAPQMKLDDDEVQKNKRLEKKRRL 772
Query: 271 NEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRME 330
E+ A++ G D +KEE++ + ++N E D+D+ R++ EGFR G Y+R+E
Sbjct: 773 KERFDAQYDDGDATYF---DDLKEEMQKQAELNRQEFEDVDDEIRVQYEGFRPGMYVRVE 829
Query: 331 IHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGW 390
I VP E V FDP +P ++GG+G E NVGY+Q+RLK+HRW H ++LK+RDP+I+S+GW
Sbjct: 830 IPAVPCEFVTNFDPHYPTILGGLGASEGNVGYLQMRLKKHRW-HNRILKTRDPLILSLGW 888
Query: 391 RRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRI 450
RRFQTIP+Y IED +GRHR+LKYTPEHMHC AT WGP+ P TG +AVQ + +A+FRI
Sbjct: 889 RRFQTIPLYYIEDHNGRHRLLKYTPEHMHCGATIWGPITPQGTGFLAVQTIGGVKANFRI 948
Query: 451 AATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IG 509
AAT VVL+ + V I KK+KL+GYP KIFK T I+ MF + LEVA+ EG I
Sbjct: 949 AATGVVLDLDKSVSIVKKLKLIGYPYKIFKNTCFIQGMFNTILEVAKFEGASIRTVSGIK 1008
Query: 510 NQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP--RDKIWQ 567
Q K+ P G R TFEDR+LMSDIVF+R W V +PR YNP+T+ L P + W
Sbjct: 1009 GQIKKALRTP-PGAFRATFEDRLLMSDIVFLRSWYPVSVPRLYNPVTSLLMPVGQKHTWS 1067
Query: 568 GMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR- 626
GM+T+ +L+ + + ++SLYKPI R R FNPL IPK LQ ALPF+SKPK + +
Sbjct: 1068 GMRTLGQLKHDLGIHNKPKQDSLYKPIERQVRHFNPLRIPKELQKALPFKSKPKYMQSKG 1127
Query: 627 KRPLLENRRAVVMEPHERKVHVLFQQLQLI 656
K P R AV+ EPHE+KV L L +
Sbjct: 1128 KTPRDLQRPAVIREPHEKKVAALLDALTTV 1157
>UNIPROTKB|E1BPP2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:DAAA02061559 EMBL:DAAA02061560 IPI:IPI00838890
Ensembl:ENSBTAT00000048816 Uniprot:E1BPP2
Length = 1290
Score = 1022 (364.8 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 218/452 (48%), Positives = 290/452 (64%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAVE---ERRLKKLSLRAKFDVQYDGSESPEEEMN 271
LETG+ +G+ ++ E +E E + ++ E KK L K ++ E + E +
Sbjct: 794 LETGDVHKGKPGPDTQIEDVEEEVKEEIDPSAEESAKKKHLDKKRKLK----EMFDAEYD 849
Query: 272 EKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEI 331
E + F D +K E++ + Q+N AE D ++ R++ EGFR G Y+R+EI
Sbjct: 850 EGESTYF-----------DDLKGEMQKQAQLNRAEFEDQEDEARVQYEGFRPGMYVRIEI 898
Query: 332 HDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWR 391
+VP E V FDP +P+++GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII S+GWR
Sbjct: 899 ENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWR 957
Query: 392 RFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIA 451
RFQTIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +AVQ++S + FRIA
Sbjct: 958 RFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGSMPDFRIA 1017
Query: 452 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGN 510
AT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG I
Sbjct: 1018 ATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRG 1077
Query: 511 QPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IWQG 568
Q K+ P EG R TFED++LMSDIVFMR W V IP FYNP+T+ L+P +K W G
Sbjct: 1078 QIKKALRAP-EGAFRATFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSG 1136
Query: 569 MKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRK 627
M+T +LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF+SKPK K
Sbjct: 1137 MRTTGQLRLAHGIKLKANKDSLYKPIVRQKKHFNSLHIPKALQKALPFKSKPKTQAKAGK 1196
Query: 628 RPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
P R AV+ EPHERK+ L L + +E
Sbjct: 1197 TPKDRVRPAVIREPHERKILALLDALSTVHSE 1228
Score = 39 (18.8 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 219 EKQEGQRKDNSGCEGIENEDESAVEER 245
E+ + + E E ED +A EER
Sbjct: 517 ERSSVEEEAEEADESSEEEDSTAEEER 543
Score = 37 (18.1 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 136 VEGNKLREGLDSGIVNTDDCS 156
+E +REG ++ TDD S
Sbjct: 546 LESEAVREGGKPELLQTDDSS 566
>UNIPROTKB|F1PKN2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 CTD:9790 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AAEX03015389 EMBL:AAEX03015390
RefSeq:XP_534956.2 Ensembl:ENSCAFT00000011417 GeneID:477760
KEGG:cfa:477760 Uniprot:F1PKN2
Length = 1287
Score = 1006 (359.2 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 212/449 (47%), Positives = 289/449 (64%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEKD 274
LETG+ +G+ ++ E +E ++ ++ + S R K D + ++ E
Sbjct: 791 LETGDVHKGKSDPDTQIEDVEEVNKEEIDPSTEE--SARKK---HLD----KKRKLKEMF 841
Query: 275 GAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDV 334
A++ G+ D +K E+ + Q+N AE D D+ R++ EGFR G Y+R+EI +V
Sbjct: 842 DAEYDEGESTYF---DDLKGEMHKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENV 898
Query: 335 PFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQ 394
P E V FDP +P+++GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII S+GWRRFQ
Sbjct: 899 PCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWRRFQ 957
Query: 395 TIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATA 454
TIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +AVQ++S+ FRIAAT
Sbjct: 958 TIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSDIMPDFRIAATG 1017
Query: 455 VVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQPK 513
V+L+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG I Q K
Sbjct: 1018 VILDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIK 1077
Query: 514 RKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IWQGMKT 571
+ P EG R +FED++LMSDIVFMR W V IP FYNP+T+ L+P +K W GM+T
Sbjct: 1078 KALRAP-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRT 1136
Query: 572 VAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRKRPL 630
+LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF++KPK K P
Sbjct: 1137 TGQLRLAHGVKLKPNKDSLYKPIVRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKIPK 1196
Query: 631 LENRRAVVMEPHERKVHVLFQQLQLIRNE 659
R AV+ EPHERK+ L L + ++
Sbjct: 1197 DRRRPAVIREPHERKILALLDALSTVHSQ 1225
Score = 47 (21.6 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 219 EKQEGQRKDNSGCEGIENEDESAVE 243
E EG + D+S C E EDE+ E
Sbjct: 452 EMSEGDKLDDS-CSDDETEDEADTE 475
>UNIPROTKB|F1NH69 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:AADN02035303 EMBL:AADN02035304 IPI:IPI00604102
Ensembl:ENSGALT00000004133 Uniprot:F1NH69
Length = 1304
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 214/448 (47%), Positives = 293/448 (65%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEKD 274
LETG +G R G E ENE+E+ + + + AK + + D + ++ E
Sbjct: 804 LETGVVHKG-RPATEGDES-ENEEENDGNKSKPEAEEEEAKKE-RLD----KKRKLKEMF 856
Query: 275 GAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDV 334
A++ G D +KEE+ + Q+N E D D+ TR++ EGFR G Y+R+EI +V
Sbjct: 857 DAEYDEGDATYF---DDLKEEMHKQAQLNKTEFEDQDDETRVQYEGFRPGMYVRIEIENV 913
Query: 335 PFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQ 394
P E V FDP +P+++GG+G E NVGY+Q+RLK+HRW+ KK+LK+RDP+I+S GWRRFQ
Sbjct: 914 PCEFVLNFDPHYPIILGGLGNSEGNVGYVQLRLKKHRWY-KKILKTRDPLILSFGWRRFQ 972
Query: 395 TIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATA 454
TIPV+ IED +GRHR+LKYTP+HMHC ATFWGP+ P TG +AVQ++S FRIAAT
Sbjct: 973 TIPVFYIEDHNGRHRLLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGTTPDFRIAATG 1032
Query: 455 VVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQPK 513
VVL+ + + + KK+KL G+P KIFK T+ IK MF S LEVA+ EG I Q K
Sbjct: 1033 VVLDLDKSITVVKKLKLTGFPFKIFKNTSFIKGMFNSQLEVAKFEGAAIRTVSGIRGQIK 1092
Query: 514 RKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDK--IWQGMKT 571
+ P G R TFED++LMSDIVF+R W V IP+FYNP+T+ L+P + W+GM+T
Sbjct: 1093 KALRAPA-GAFRATFEDKLLMSDIVFVRTWYPVSIPKFYNPVTSLLKPAGEKDSWKGMRT 1151
Query: 572 VAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR-KRPL 630
+LR + + + NK+SLYKPI R R FN L IPK+LQ ALPF++KPK++ + K P
Sbjct: 1152 TGQLRHDQGIKLKQNKDSLYKPIVREKRHFNKLHIPKALQKALPFKNKPKNLEKKGKTPK 1211
Query: 631 LENRRAVVMEPHERKVHVLFQQLQLIRN 658
+ R AV+MEPHE+K+ L L + N
Sbjct: 1212 DQWRPAVIMEPHEKKISALLNALSTVNN 1239
>UNIPROTKB|Q14692 [details] [associations]
symbol:BMS1 "Ribosome biogenesis protein BMS1 homolog"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0042255 "ribosome assembly" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005524 GO:GO:0005730 GO:GO:0003924
GO:GO:0006184 eggNOG:COG5192 EMBL:D80009 EMBL:AL022344
EMBL:CH471160 EMBL:BC043345 EMBL:BC150252 IPI:IPI00006099
RefSeq:NP_055568.3 UniGene:Hs.10848 ProteinModelPortal:Q14692
SMR:Q14692 IntAct:Q14692 STRING:Q14692 PhosphoSite:Q14692
DMDM:27151474 PaxDb:Q14692 PeptideAtlas:Q14692 PRIDE:Q14692
Ensembl:ENST00000374518 GeneID:9790 KEGG:hsa:9790 UCSC:uc001jaj.3
CTD:9790 GeneCards:GC10P043277 H-InvDB:HIX0059462
H-InvDB:HIX0172328 H-InvDB:HIX0172329 HGNC:HGNC:23505 HPA:HPA036589
MIM:611448 neXtProt:NX_Q14692 PharmGKB:PA162377556
HOGENOM:HOG000166882 HOVERGEN:HBG023890 InParanoid:Q14692 KO:K14569
OMA:ASYGFEM OrthoDB:EOG4KWJS4 PhylomeDB:Q14692 ChiTaRS:BMS1
GenomeRNAi:9790 NextBio:36866 Bgee:Q14692 CleanEx:HS_BMS1
Genevestigator:Q14692 GermOnline:ENSG00000165733 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 Uniprot:Q14692
Length = 1282
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 217/452 (48%), Positives = 289/452 (63%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAV---EERRLKKLSLRAKFDVQYDGSESPEEEMN 271
LETG+ +G+ N+ E IE E + + EE KK L K ++ E + E +
Sbjct: 786 LETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLK----EMFDAEYD 841
Query: 272 EKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEI 331
E + F D +K E++ + Q+N AE D D+ R++ EGFR G Y+R+EI
Sbjct: 842 EGESTYF-----------DDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEI 890
Query: 332 HDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWR 391
+VP E V+ FDP +P+++GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII S+GWR
Sbjct: 891 ENVPCEFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWR 949
Query: 392 RFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIA 451
RFQTIP+Y IED +GR R+LKYTP+HMHC A FWGP+ P TG +A+Q++S FRIA
Sbjct: 950 RFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIA 1009
Query: 452 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGN 510
AT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG I
Sbjct: 1010 ATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRG 1069
Query: 511 QPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IWQG 568
Q K+ P EG R +FED++LMSDIVFMR W V IP FYNP+T+ L+P +K W G
Sbjct: 1070 QIKKALRAP-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSG 1128
Query: 569 MKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRK 627
M+T +LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF++KPK K
Sbjct: 1129 MRTTGQLRLAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGK 1188
Query: 628 RPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
P R AV+ EPHERK+ L L + ++
Sbjct: 1189 VPKDRRRPAVIREPHERKILALLDALSTVHSQ 1220
>ASPGD|ASPL0000005995 [details] [associations]
symbol:AN6334 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005739 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
eggNOG:COG5192 GO:GO:0030686 HOGENOM:HOG000166882 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 OrthoDB:EOG4GTPN1
GO:GO:0034511 RefSeq:XP_663938.1 ProteinModelPortal:Q5AZE6
STRING:Q5AZE6 EnsemblFungi:CADANIAT00006652 GeneID:2871229
KEGG:ani:AN6334.2 Uniprot:Q5AZE6
Length = 1179
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 214/512 (41%), Positives = 290/512 (56%)
Query: 161 YEDL-KSWKQEEVYESIRDRFVTGDWSKAAQRNQXXXXXXXXXXXXXXXXXXXXXLETGE 219
YE+L + W+ EE+ ES+R RFVT A LETGE
Sbjct: 613 YEELERKWRDEEMIESLRKRFVTAKLGDADDGEDEDVEDAFDEDDEGDGAFED--LETGE 670
Query: 220 KQEGQRKDNSGCEGIENEDESA--VEERRLKKLSLRAKFDVQYDGSESPEEEMNEKDGAK 277
G + D+ G ++E + +E R + + + ++++ E E N KD ++
Sbjct: 671 VFNGIKDDDGEASGEDDEKDGPEDLEAERARNAKRKEELKLRFE-EEDREGFANSKDNSR 729
Query: 278 FHCGQPNE-IG---LVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHD 333
+P E G D K +++ + +N AE LD +R EG+R GTY R+ +
Sbjct: 730 HDGAEPEEEFGEDEWYDAQKAKMQKQADINRAEFEALDPNSRARAEGYRAGTYARIVLER 789
Query: 334 VPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRF 393
VP E F+P +PV+VGG+ E GY+QVR+KRHRW HKK+LKS DP+I S+GWRRF
Sbjct: 790 VPCEFSTKFNPRYPVIVGGLAPTEDRFGYVQVRIKRHRW-HKKILKSNDPLIFSLGWRRF 848
Query: 394 QTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAAT 453
QT+P+Y+ D R+RMLKYTPEHMHC TF+GPL P TG VQ+ SN FRIAAT
Sbjct: 849 QTLPMYSTSDNRTRNRMLKYTPEHMHCFGTFYGPLVAPNTGFCCVQSFSNKNPGFRIAAT 908
Query: 454 AVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQP 512
VVL + +I KK+KL G KIFK TA IKDMF S LE+A+ EG I Q
Sbjct: 909 GVVLSVDEHTEIVKKLKLTGVAYKIFKNTAFIKDMFNSSLEIAKFEGAAIRTVSGIRGQI 968
Query: 513 KRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKI-----WQ 567
KR +P +G R TFED+ILMSDIVF+R W ++ RFYNP+T L + + W+
Sbjct: 969 KRALSKP-DGCFRATFEDKILMSDIVFLRAWYPIKPHRFYNPVTNLLDIEEGLSGDGGWK 1027
Query: 568 GMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGRK 627
GM+ E+RRE + P+NK+S Y+ I R R FNPL +P+ L A LPF+S+ + RK
Sbjct: 1028 GMRLTGEVRREQGIPTPLNKDSAYRKIERPERHFNPLRVPRQLAAELPFKSQITRMKSRK 1087
Query: 628 RPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
+RAVV+ E+K L Q+L +RNE
Sbjct: 1088 DKTYLQKRAVVLGGEEKKARDLMQKLNTLRNE 1119
>FB|FBgn0036686 [details] [associations]
symbol:CG7728 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005634
EMBL:AE014296 GO:GO:0022008 GO:GO:0042254 eggNOG:COG5192 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AY061447 RefSeq:NP_648945.1
UniGene:Dm.3597 SMR:Q9VVC9 STRING:Q9VVC9 EnsemblMetazoa:FBtr0075274
GeneID:39904 KEGG:dme:Dmel_CG7728 UCSC:CG7728-RA
FlyBase:FBgn0036686 InParanoid:Q9VVC9 OrthoDB:EOG4ZGMT9
GenomeRNAi:39904 NextBio:816019 Uniprot:Q9VVC9
Length = 1159
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 228/586 (38%), Positives = 321/586 (54%)
Query: 97 NLIQLVYGXXXXXXXXXXXXVQXXXXXXXXXXXXFFKPKVEGNKLREGLDSGIVNTDD-C 155
NL++LVYG F+ + L++ D I + D+ C
Sbjct: 533 NLMRLVYGVYNQSEHSRQEA--EAEDDSEEELGGLFRVAAKKQSLKQS-DQDIRDKDERC 589
Query: 156 SKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQXXXXXXXXXXXXXXXXXXXXXL 215
+ + W E+ E I++ FVTG W KA++ + L
Sbjct: 590 FFEYQGDATRDWLAEDNKELIKNCFVTGKW-KASEDAENLLKMDDMSDAESEVYGDFEDL 648
Query: 216 ETGEKQEGQRKDNSGCEGIEN----EDESA-------VEERRL-------KKLSLRAKFD 257
ETGE+ G+ K G E E ED SA VEE L KKL L+AKFD
Sbjct: 649 ETGEQHSGKPKAEDGGESEEENSKPEDSSAPKRKLTRVEEENLTKAELMAKKLKLKAKFD 708
Query: 258 VQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLE 317
+YD S E E+D + + + +K E + + ++N +E LD R++
Sbjct: 709 AEYDNSG---EGKGEEDNGRI----TGDHSFYEDLKAEAQRQSELNKSEFAHLDNEFRIQ 761
Query: 318 LEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKV 377
+EG+R G Y+R+ +P E +E FD +PVLVG + + E+NVGY+ ++K+HRW+ KK+
Sbjct: 762 IEGYRPGLYVRLGFKQLPAEFIENFDASYPVLVGALNMTEENVGYVNCKVKKHRWY-KKI 820
Query: 378 LKSRDPIIVSIGWRRFQTIPVYA-IEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVV 436
LK+ DP+I+S+GWRRFQT+ +YA +ED R R LKYTP H+ C TFWGP+ P TG +
Sbjct: 821 LKTGDPLIISMGWRRFQTVAIYAKVEDNF-RQRYLKYTPNHVTCSMTFWGPITPQNTGFL 879
Query: 437 AVQNLSNNQAS-----FRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 491
A+Q + +Q FRIAAT V E + +I KK+KLVG+P KI+KKTA +KDMF S
Sbjct: 880 ALQTVRQDQEEMRRLGFRIAATGCVTEVDKSSQIMKKLKLVGHPFKIYKKTAFVKDMFNS 939
Query: 492 DLEVAQCEG-KEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPR 550
LEVA+ EG K I Q K+ P EG R TFED+IL+SDIVF R W VE+PR
Sbjct: 940 SLEVAKFEGAKIKTVSGIRGQIKKAHHTP-EGSYRATFEDKILLSDIVFCRTWFRVEVPR 998
Query: 551 FYNPLTTALQPRDKI--WQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPK 608
FY P+++ L P D+ WQGMKT+ +L+RE + +S+Y I R + F PL IPK
Sbjct: 999 FYAPVSSLLLPLDQKSQWQGMKTLGQLKRERAVQNAAQPDSMYTTIVRKEKIFRPLTIPK 1058
Query: 609 SLQAALPFESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQ 654
+LQ ALP++ KPK P + LE R AVV P+E+KV + + ++
Sbjct: 1059 ALQRALPYKDKPKLGPENPKAALE-RVAVVNSPYEQKVSKMMKMIE 1103
>DICTYBASE|DDB_G0287891 [details] [associations]
symbol:bms1l "BMS1-like ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 dictyBase:DDB_G0287891 GO:GO:0005525 GO:GO:0005739
GO:GO:0005730 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 eggNOG:COG5192 GO:GO:0006364 KO:K14569
OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
RefSeq:XP_637074.1 ProteinModelPortal:Q54JS8 STRING:Q54JS8
EnsemblProtists:DDB0234115 GeneID:8626329 KEGG:ddi:DDB_G0287891
InParanoid:Q54JS8 ProtClustDB:CLSZ2846661 Uniprot:Q54JS8
Length = 1205
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 211/540 (39%), Positives = 308/540 (57%)
Query: 131 FFKPKVEG-NKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAA 189
FFK K G ++ D D K + +K E++ E + +FV ++
Sbjct: 622 FFKVKKGGYGSMKLSTDKEESTKDLLDSSKYIHSINDFKSEDIKELLAIKFV----NRNE 677
Query: 190 QRNQXXXXXXXXXXXXXXXXXXXXXLETGEKQEGQR----KDNS-GCEGIENEDESAVEE 244
LETG+K + K+N +G E++D+
Sbjct: 678 LETTGLIGKNNAEGEDEVLFGDFEDLETGKKYDSSSSTTTKNNKENDKGEEDDDDDDDNS 737
Query: 245 RRLKKLSLRAKFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNI 304
+ K + + + + ++S +E+ EK AK+ Q NE ++ EE++ ++ +N
Sbjct: 738 QSDDKNNKENSIENERERNKSKKEKQIEKINAKY---QENEKDFQGELNEEVKRQRAINE 794
Query: 305 AELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQ 364
E + D+ R + EGF G Y+R+E +P E EYFDP PV+VGG+ E+N+G +
Sbjct: 795 KEFENDDQFYRQKYEGFPIGVYVRIEFEKIPCEFSEYFDPKFPVVVGGLLSSEENLGMIN 854
Query: 365 VRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATF 424
V LK+HRW HK++LKS DP+++S+GWRRFQTI +Y+ +D +GR+RMLKYTPEHMHC A+F
Sbjct: 855 VSLKKHRW-HKRILKSNDPLMISVGWRRFQTIVLYSTKDINGRNRMLKYTPEHMHCHASF 913
Query: 425 WGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTAL 484
+GPL PP TG + N +NNQA FR++AT VL+ + + + KK+KL+G P KI KKT
Sbjct: 914 YGPLTPPGTGFIGFTNANNNQAGFRVSATGTVLDLDSSINVVKKLKLIGQPDKIMKKTCF 973
Query: 485 IKDMFTSDLEVAQCEGKEAAKEE-IGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGW 543
+ MFTS LEVA+ G I Q K+ P EG R TFEDR+L SDI+F+R W
Sbjct: 974 VNGMFTSRLEVAKFVGATIRTVSGIRGQIKKPLSHP-EGSFRATFEDRLLPSDIIFLRTW 1032
Query: 544 ADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYK-PIGRTPRKFN 602
+ RFYNP+T+ LQ + W+GMKTV +LR E+NLS PV K+S Y+ I R +KF
Sbjct: 1033 YTITPTRFYNPVTSLLQEKKTHWEGMKTVGQLRFENNLSAPVKKDSSYQGKIERDEKKFK 1092
Query: 603 PLVIPKSLQAALPFESKPKD---IPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
L IP LQ+ LPF+ KPK I LL +R ++ EPHE++V L ++L+ I+N+
Sbjct: 1093 ELRIPNKLQSQLPFDLKPKGTKIIKNADDALLSSRVNII-EPHEKQVADLMRRLESIKNK 1151
>UNIPROTKB|F1RG23 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000011164 OMA:DIAFVRT Uniprot:F1RG23
Length = 399
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 184/338 (54%), Positives = 235/338 (69%)
Query: 326 YLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPII 385
Y+R+EI +VP E V FDP +P+++GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII
Sbjct: 2 YVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPII 60
Query: 386 VSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQ 445
S+GWRRFQTIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +A+Q++S
Sbjct: 61 FSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGIM 120
Query: 446 ASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAK 505
FRIAAT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG
Sbjct: 121 PDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVARFEGAVIRT 180
Query: 506 EE-IGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RD 563
I Q K+ P EG R TFED++LMSDIVFMR W V +P FYNP+T+ L+P +
Sbjct: 181 VSGIRGQIKKALRAP-EGAFRATFEDKLLMSDIVFMRTWYPVSVPAFYNPVTSLLKPVGE 239
Query: 564 K-IWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK- 621
K W GM+T +LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF+SKPK
Sbjct: 240 KDTWSGMRTTGQLRLVHGIKLKPNKDSLYKPIIRQKKHFNSLHIPKALQKALPFKSKPKT 299
Query: 622 DIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
K P R AV+ EPHERK+ L L + ++
Sbjct: 300 QAKAGKTPKDRLRPAVIREPHERKILALLDALSTVHSQ 337
>UNIPROTKB|E9PTV4 [details] [associations]
symbol:Bms1 "Protein Bms1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074774 IPI:IPI00358418
Ensembl:ENSRNOT00000008741 ArrayExpress:E9PTV4 Uniprot:E9PTV4
Length = 1282
Score = 911 (325.7 bits), Expect = 3.0e-91, P = 3.0e-91
Identities = 198/449 (44%), Positives = 277/449 (61%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEKD 274
LETG+ +G+ ++ E IE E+E E ++ S R K + + ++ E
Sbjct: 786 LETGDVHKGKPGLDTQSEDIEEEEEVKEETGPAEEESAREKH-------LNKKRKLKELF 838
Query: 275 GAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDV 334
A++ G+ D +K E++ + Q+N AE D D+ TR++ EGFR G Y+R+EI ++
Sbjct: 839 DAEYDEGESTYF---DDLKGEMQRQAQLNQAEFEDQDDETRVQYEGFRPGMYVRIEIENI 895
Query: 335 PFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQ 394
P E V+ FDP +P+++GG+G E VGY+Q+RLK+HRW+ KK+LKSRDP+I S+GWRRFQ
Sbjct: 896 PCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRLKKHRWY-KKILKSRDPVIFSVGWRRFQ 954
Query: 395 TIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATA 454
TIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +A+Q++S FRIAAT
Sbjct: 955 TIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGAMPEFRIAATG 1014
Query: 455 VVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQPK 513
VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG I Q K
Sbjct: 1015 VVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIK 1074
Query: 514 RKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP--RDKIWQGMKT 571
+ P EG R +FED++LMS+ VF+ W+ I FY + + L P + W ++
Sbjct: 1075 KALRAP-EGAFRASFEDKLLMSEWVFIFNWSVCSIEAFYFNVKSLLNPCGSRRCWTVLRI 1133
Query: 572 VAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRKRPL 630
+ L + +KNS++KPI R + FN L IPK+LQ ALPF++KPK K P
Sbjct: 1134 IYYLLLLLGRYLECSKNSVFKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPR 1193
Query: 631 LENRRAVVMEPHERKVHVLFQQLQLIRNE 659
R AV+ EPHERKV L L I +
Sbjct: 1194 DRQRPAVIREPHERKVLALLDALSTIHGQ 1222
>POMBASE|SPBC31E1.06 [details] [associations]
symbol:bms1 "GTP binding protein Bms1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 PomBase:SPBC31E1.06 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0005819
EMBL:CU329671 GO:GO:0003924 GO:GO:0006184 eggNOG:COG5192
GO:GO:0006364 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 RefSeq:NP_595102.2
ProteinModelPortal:O94653 STRING:O94653 EnsemblFungi:SPBC31E1.06.1
GeneID:2540390 KEGG:spo:SPBC31E1.06 OrthoDB:EOG4GTPN1
NextBio:20801517 Uniprot:O94653
Length = 1121
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 203/500 (40%), Positives = 278/500 (55%)
Query: 165 KSWKQEEVYESIRDRFVTGDWSKAAQRNQXXXXXXXXXXXXXXXXXXXXXLETGEKQEGQ 224
K W+ ++ ++ RF+TG + + + E+ G
Sbjct: 580 KKWENPQLLAQLKSRFITGSLLDSIEGQEEVSQDDEEGDFEDLEDEENSSDNEMEESSGS 639
Query: 225 RKDNSGCEGIENED-ESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEKDGAKFHCGQP 283
E + D ++ EE KK LR +F+ + G PE+ KD
Sbjct: 640 SVTAENEESADEVDFQTEREENARKKEELRLRFEEEDRGD--PEK----KD--------- 684
Query: 284 NEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFD 343
+ + KE+I + +N D+D +R E+EG+R GTY+R+ I+DVPFE VE+FD
Sbjct: 685 --VDWYTEEKEKIARQLVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEFVEHFD 742
Query: 344 PCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIED 403
+PV+VGG+ EQ G +QVR+KRHRW HKK+LK+ DP+I S+GWRRFQ+IPVY+I D
Sbjct: 743 SRYPVVVGGLLPNEQRYGLVQVRIKRHRW-HKKILKTNDPLIFSMGWRRFQSIPVYSISD 801
Query: 404 RSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQA---SFRIAATAVVLEFN 460
R+RMLKYTPEHMHC TF+GP P +G AVQ+++N+ A SFRIAAT VL +
Sbjct: 802 SRTRNRMLKYTPEHMHCFGTFYGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGSVLNID 861
Query: 461 HEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQPKRKGGQP 519
I KK+KL G P KIFK TA IK MF+S LEVA+ EG I Q K+ Q
Sbjct: 862 QSTDIVKKLKLTGVPYKIFKNTAFIKKMFSSPLEVAKFEGANIRTVSGIRGQVKKAVDQ- 920
Query: 520 REGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRREH 579
G R TFED+ILMSDIVF+R W V++ +F +T L+ W GM+ E+R E
Sbjct: 921 EHGHFRATFEDKILMSDIVFLRAWYPVQVRKFCTMVTNLLETDKTEWNGMRLTGEVRHEL 980
Query: 580 NLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGRKRPLLENRRAVVM 639
L P+ NS Y+ I R R FNPL +P SLQA LPF S+ K + R +P +R V++
Sbjct: 981 GLKTPLRPNSQYQEIVRPSRHFNPLKVPASLQAQLPFNSRQKALRPRSKPTYMQKRTVLL 1040
Query: 640 EPHERKVHVLFQQLQLIRNE 659
ERKV L Q++ + +
Sbjct: 1041 NAEERKVRDLLQKVMTLHTD 1060
>RGD|1308043 [details] [associations]
symbol:Bms1 "BMS1 homolog, ribosome assembly protein (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308043
InterPro:IPR007034 Pfam:PF04950 IPI:IPI00358418 EMBL:BC092659
UniGene:Rn.41094 STRING:Q561Z9 UCSC:RGD:1308043
Genevestigator:Q561Z9 Uniprot:Q561Z9
Length = 392
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 180/334 (53%), Positives = 230/334 (68%)
Query: 330 EIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIG 389
EI ++P E V+ FDP +P+++GG+G E VGY+Q+RLK+HRW+ KK+LKSRDP+I S+G
Sbjct: 1 EIENIPCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRLKKHRWY-KKILKSRDPVIFSVG 59
Query: 390 WRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFR 449
WRRFQTIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +A+Q++S FR
Sbjct: 60 WRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGAMPEFR 119
Query: 450 IAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-I 508
IAAT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG I
Sbjct: 120 IAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGI 179
Query: 509 GNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IW 566
Q K+ P EG R +FED++LMSDIVFMR W V IP FYNP+T+ L+P +K W
Sbjct: 180 RGQIKKALRAP-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTW 238
Query: 567 QGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPG 625
GM+T +LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF++KPK
Sbjct: 239 SGMRTTHQLRLAHGIKLKPNKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKA 298
Query: 626 RKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
K P R AV+ EPHERKV L L I +
Sbjct: 299 GKVPRDRQRPAVIREPHERKVLALLDALSTIHGQ 332
>CGD|CAL0002359 [details] [associations]
symbol:BMS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0034511 "U3 snoRNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 866 (309.9 bits), Expect = 7.4e-89, Sum P(2) = 7.4e-89
Identities = 181/463 (39%), Positives = 285/463 (61%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-EMNEK 273
LE E Q+ + + N + E+ED+ A + +K +V + + E+ ++N
Sbjct: 688 LEATENQDQEEEQNKSTKTAEDEDDFADFDAEEEKEEEEDDDNVDEESMTTEEKRQLNAA 747
Query: 274 DGAK----FHCGQPNEIGLVDQMKE-EIEFRKQMN-IA---ELNDL--DEVT---RLELE 319
AK F + E G D E E + Q N +A E+N + +E+T R+++E
Sbjct: 748 KKAKLKMQFEEEEDREFGASDPEDESETWYEYQKNKMAKQLEINKVQYEEMTPEMRIKIE 807
Query: 320 GFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLK 379
G+R G+Y+++ ++P E ++ FDP +P+++GG+ E G M R++RHRW HKK+LK
Sbjct: 808 GYRAGSYVKIVFDNIPCEFIDNFDPAYPLVLGGLLTTESRFGIMNARIRRHRW-HKKILK 866
Query: 380 SRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVA-- 437
S+DP+I+S+GWRRFQT+P+Y D R+RMLKYTPEH +C A+F+GPL P T V
Sbjct: 867 SQDPLILSLGWRRFQTLPIYTTSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFN 926
Query: 438 VQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQ 497
+ + + +FR+AA+ ++ + N V+I KK+KLVGYP KIF+ TA IKDMF++ LEVA+
Sbjct: 927 IVDSKSTTGAFRVAASGIIEDINSSVEIVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAK 986
Query: 498 CEGKEAAKEE-IGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLT 556
EG + I + KR +P +G R TFED+ILMSD +F++ W V++ +FYNP+T
Sbjct: 987 FEGAQIRTVSGIRGEIKRALSKP-DGYFRATFEDKILMSDTIFLKTWYPVKVKKFYNPVT 1045
Query: 557 TALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPF 616
+ L + W+GM+ ++R + N++ P+N +S YK + R R+FNPL +PKS+QA LPF
Sbjct: 1046 SLLLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFNPLKVPKSIQAELPF 1105
Query: 617 ESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
+S+ + +K+ ++RAVV+ E+K L Q++ IR E
Sbjct: 1106 KSQIHTMKPQKKKTYMSKRAVVLGGEEKKARDLMQKINSIRKE 1148
Score = 41 (19.5 bits), Expect = 7.4e-89, Sum P(2) = 7.4e-89
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 134 PKVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYE 174
PKV ++ EG + N DD +EDL++ + ++ E
Sbjct: 659 PKVT-DETEEGKEIKENNDDDDELYGDFEDLEATENQDQEE 698
>UNIPROTKB|Q5A9Y0 [details] [associations]
symbol:BMS1 "Putative uncharacterized protein BMS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 866 (309.9 bits), Expect = 7.4e-89, Sum P(2) = 7.4e-89
Identities = 181/463 (39%), Positives = 285/463 (61%)
Query: 215 LETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-EMNEK 273
LE E Q+ + + N + E+ED+ A + +K +V + + E+ ++N
Sbjct: 688 LEATENQDQEEEQNKSTKTAEDEDDFADFDAEEEKEEEEDDDNVDEESMTTEEKRQLNAA 747
Query: 274 DGAK----FHCGQPNEIGLVDQMKE-EIEFRKQMN-IA---ELNDL--DEVT---RLELE 319
AK F + E G D E E + Q N +A E+N + +E+T R+++E
Sbjct: 748 KKAKLKMQFEEEEDREFGASDPEDESETWYEYQKNKMAKQLEINKVQYEEMTPEMRIKIE 807
Query: 320 GFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLK 379
G+R G+Y+++ ++P E ++ FDP +P+++GG+ E G M R++RHRW HKK+LK
Sbjct: 808 GYRAGSYVKIVFDNIPCEFIDNFDPAYPLVLGGLLTTESRFGIMNARIRRHRW-HKKILK 866
Query: 380 SRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVA-- 437
S+DP+I+S+GWRRFQT+P+Y D R+RMLKYTPEH +C A+F+GPL P T V
Sbjct: 867 SQDPLILSLGWRRFQTLPIYTTSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFN 926
Query: 438 VQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQ 497
+ + + +FR+AA+ ++ + N V+I KK+KLVGYP KIF+ TA IKDMF++ LEVA+
Sbjct: 927 IVDSKSTTGAFRVAASGIIEDINSSVEIVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAK 986
Query: 498 CEGKEAAKEE-IGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLT 556
EG + I + KR +P +G R TFED+ILMSD +F++ W V++ +FYNP+T
Sbjct: 987 FEGAQIRTVSGIRGEIKRALSKP-DGYFRATFEDKILMSDTIFLKTWYPVKVKKFYNPVT 1045
Query: 557 TALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPF 616
+ L + W+GM+ ++R + N++ P+N +S YK + R R+FNPL +PKS+QA LPF
Sbjct: 1046 SLLLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFNPLKVPKSIQAELPF 1105
Query: 617 ESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 659
+S+ + +K+ ++RAVV+ E+K L Q++ IR E
Sbjct: 1106 KSQIHTMKPQKKKTYMSKRAVVLGGEEKKARDLMQKINSIRKE 1148
Score = 41 (19.5 bits), Expect = 7.4e-89, Sum P(2) = 7.4e-89
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 134 PKVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYE 174
PKV ++ EG + N DD +EDL++ + ++ E
Sbjct: 659 PKVT-DETEEGKEIKENNDDDDELYGDFEDLEATENQDQEE 698
>WB|WBGene00022021 [details] [associations]
symbol:Y61A9LA.10 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 GO:GO:0005525 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254
eggNOG:COG5192 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:FO081464 RefSeq:NP_504245.3 ProteinModelPortal:Q9N306
SMR:Q9N306 STRING:Q9N306 PaxDb:Q9N306 EnsemblMetazoa:Y61A9LA.10
GeneID:178851 KEGG:cel:CELE_Y61A9LA.10 UCSC:Y61A9LA.10 CTD:178851
WormBase:Y61A9LA.10 InParanoid:Q9N306 NextBio:902832 Uniprot:Q9N306
Length = 1055
Score = 830 (297.2 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 181/447 (40%), Positives = 264/447 (59%)
Query: 219 EKQEGQ-RKDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-EMNEKDGA 276
+K+ G +DN E +++E+E ++ K + + D S + E K
Sbjct: 553 KKEIGSDNEDNDDGEDMDDEEEDGDDDETGGN---EKKEESEADKSRKQKRLEAKIKLKQ 609
Query: 277 KFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPF 336
+F+ ++ K E+ + +N +DE R ++EGFR+G Y+R+EI VP
Sbjct: 610 RFNDDYDETCKFYNKAKNEMTEQADLNRQVFEGMDEEEREKVEGFRSGRYVRIEISSVPC 669
Query: 337 EMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTI 396
E V++FD P ++GG+ GEQN+G +Q R+KRHRW+ ++ LKSRDP+I+S GWRRFQTI
Sbjct: 670 EFVDHFDTSAPYIIGGLLPGEQNMGVVQARVKRHRWF-ERTLKSRDPLIISCGWRRFQTI 728
Query: 397 PVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVV 456
+Y+++D + R R LKYTPEHMHC A+F+GP+ TG++A+Q++++ +RI AT V
Sbjct: 729 AIYSVQDHNMRLRFLKYTPEHMHCHASFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGV 788
Query: 457 LEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQPKRK 515
L+ + ++ KK+KL+G+P KIFKKTA +K MF S LEVA+ EG I Q K+
Sbjct: 789 LDLDKSTQVVKKLKLIGHPEKIFKKTAFVKGMFNSALEVAKFEGATIRTVAGIRGQIKKA 848
Query: 516 GGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAEL 575
P EG R TFED+ILM DIVF+R W V IPRFY P++ LQ W GM+TV ++
Sbjct: 849 IKAP-EGAFRATFEDKILMRDIVFLRSWVTVPIPRFYTPISDHLQASAAAWIGMRTVGKM 907
Query: 576 RREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR----KRPLL 631
R E + P NK+S YKPI R + P+ +P LQ +LPF+ KP R K L+
Sbjct: 908 RSELGMGTPQNKDSDYKPIVRKEFESAPIHLPPKLQKSLPFKMKPT-YQAREEKEKDSLV 966
Query: 632 ENRRAVVMEPHERKVHVLFQQLQLIRN 658
AVV+EP E K L+ + +
Sbjct: 967 ARHTAVVLEPEEAKRERFMDMLRTLND 993
Score = 37 (18.1 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 216 ETGEKQEGQRKDNSGCEGIENEDESAVEE 244
E GE+ E + + E+EDE EE
Sbjct: 405 EPGEEDEEDLDEEDFQDEEEDEDEDEDEE 433
>SGD|S000006138 [details] [associations]
symbol:BMS1 "GTPase required for ribosomal subunit synthesis
and rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0042255 "ribosome
assembly" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;IDA;IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 SGD:S000006138 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0005730 GO:GO:0003924 EMBL:BK006949
eggNOG:COG5192 GO:GO:0030686 GO:GO:0006364 HOGENOM:HOG000166882
KO:K14569 OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
OrthoDB:EOG4GTPN1 EMBL:Z73573 PIR:S65236 RefSeq:NP_015107.1
ProteinModelPortal:Q08965 SMR:Q08965 DIP:DIP-6562N IntAct:Q08965
MINT:MINT-647500 STRING:Q08965 PaxDb:Q08965 PeptideAtlas:Q08965
PRIDE:Q08965 EnsemblFungi:YPL217C GeneID:855884 KEGG:sce:YPL217C
CYGD:YPL217c GeneTree:ENSGT00550000074774 NextBio:980544
Genevestigator:Q08965 GermOnline:YPL217C GO:GO:0034511
Uniprot:Q08965
Length = 1183
Score = 809 (289.8 bits), Expect = 3.6e-80, P = 3.6e-80
Identities = 197/544 (36%), Positives = 289/544 (53%)
Query: 131 FFKPKVEGNKLREGLDSGIVNTDD-CSKIKSYEDL-KSWKQEEVYESIRDRFVTGDWSKA 188
FF+ K +G +EG V+ + ++E L K WK ++I++RF+ G A
Sbjct: 588 FFRKK-DGTVTKEGNKDHAVDLEKFVPYFDTFEKLAKKWKS---VDAIKERFL-G----A 638
Query: 189 AQRNQXXXXXXXXXXXXXXXXXXXXXLETGEKQEGQRKDNSGCEGI---ENEDESAVEER 245
LE G E Q +DNS E ENED + ++
Sbjct: 639 GILGNDNKTKSDSNEGGEELYGDFEDLEDGNPSE-QAEDNSDKESEDEDENEDTNGDDDN 697
Query: 246 RLKKLSLRAKFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKE-----EIEFRK 300
K D+ + EK A+F + D+ E E++ K
Sbjct: 698 SFTNFDAEEKKDLTMEQEREMNAAKKEKLRAQFEIEEGENFKEDDENNEYDTWYELQKAK 757
Query: 301 QMNIAELNDLD--EVT---RLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGL 355
E+N+++ E+T R +EGF+ G+Y+R+ VP E V+ F+P P+++GG+
Sbjct: 758 ISKQLEINNIEYQEMTPEQRQRIEGFKAGSYVRIVFEKVPMEFVKNFNPKFPIVMGGLLP 817
Query: 356 GEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTP 415
E G ++ RL+RHRW HKK+LK+ DP+++S+GWRRFQT+P+Y D R RMLKYTP
Sbjct: 818 TEIKFGIVKARLRRHRW-HKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTP 876
Query: 416 EHMHCLATFWGPLAPPQTGVVAVQNLSNNQAS--FRIAATAVVLEFNHEVKIKKKIKLVG 473
EH +C A F+GPL P T VQ ++N+ FRIAAT +V E + ++I KK+KLVG
Sbjct: 877 EHTYCNAAFYGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVG 936
Query: 474 YPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEE-IGNQPKRKGGQPREGIARCTFEDRI 532
+P KIFK TA IKDMF+S +EVA+ EG + I + KR +P EG R FED+I
Sbjct: 937 FPYKIFKNTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRALSKP-EGHYRAAFEDKI 995
Query: 533 LMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYK 592
LMSDIV +R W V + +FYNP+T+ L W+G++ ++R NL P N +S Y
Sbjct: 996 LMSDIVILRSWYPVRVKKFYNPVTSLLLKEKTEWKGLRLTGQIRAAMNLETPSNPDSAYH 1055
Query: 593 PIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQ 652
I R R FN L +PK++Q LPF+S+ + +K+ +RAVV+ E+K Q+
Sbjct: 1056 KIERVERHFNGLKVPKAVQKELPFKSQIHQMKPQKKKTYMAKRAVVLGGDEKKARSFIQK 1115
Query: 653 LQLI 656
+ I
Sbjct: 1116 VLTI 1119
>GENEDB_PFALCIPARUM|PFA0330w [details] [associations]
symbol:AARP2 "pfAARP2 protein" species:5833
"Plasmodium falciparum" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 497 (180.0 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 128/366 (34%), Positives = 204/366 (55%)
Query: 261 DGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEG 320
D + + ++ N KD K + G NEI + + +K+ ++ K + + + +++ L G
Sbjct: 991 DNNINSGDDNNLKDKDKGNIG--NEINIKENLKK-LKEEKLIEKEKFRETEKIGVLN-SG 1046
Query: 321 FRT----GTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKK 376
+ + G Y+R+E++ ++ + + ++ GGI E+ + R+K+HRW+ K
Sbjct: 1047 YGSSVNIGEYVRIELNIEKKKLAILKN--NLIICGGIQTYEEKDSLIHCRIKKHRWF-PK 1103
Query: 377 VLKSRDPIIVSIGWRRFQTIPVYAIEDRSG-RHRMLKYTPEHMHCLATFWGPLAPPQTGV 435
+L+S DP+I S+GWRR+Q+IP+Y+I +R+ R R LKYT EHMHC TF+GPLA +G+
Sbjct: 1104 LLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLKYTTEHMHCNCTFYGPLASVNSGI 1163
Query: 436 VAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEV 495
+A+ N +RI +++E N+ + I KK+KL+G P KIFK TA +K+MF SDLEV
Sbjct: 1164 LALYNYKK-VPFYRICINGLIIETNNNLNIMKKLKLIGEPYKIFKNTAFVKNMFNSDLEV 1222
Query: 496 AQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPL 555
+ G + K G RCTF D+I MSDIV ++ + +V+I +FY
Sbjct: 1223 CKFLNCPVVTPS-GIKGLIKNKINNNGDFRCTFADKIRMSDIVILKLYVNVKIKKFYY-- 1279
Query: 556 TTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALP 615
+KI K++ ELR +N I VN N+ Y+ I + I L LP
Sbjct: 1280 ---FDIENKI----KSINELRYLYN--IYVNHNNNYRSIPFRHFYHTKIQIKSKLLKDLP 1330
Query: 616 FESKPK 621
F+SKPK
Sbjct: 1331 FKSKPK 1336
Score = 40 (19.1 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 56 GEDENNHNVD--NHLSS 70
G+D NN+N D N+++S
Sbjct: 938 GDDNNNNNSDDDNNINS 954
Score = 38 (18.4 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 58 DENNHNVD-NHLSSG 71
D+NN N D N+++SG
Sbjct: 983 DDNNINSDDNNINSG 997
>UNIPROTKB|Q8I275 [details] [associations]
symbol:AARP2 "PfAARP2 protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 497 (180.0 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 128/366 (34%), Positives = 204/366 (55%)
Query: 261 DGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEG 320
D + + ++ N KD K + G NEI + + +K+ ++ K + + + +++ L G
Sbjct: 991 DNNINSGDDNNLKDKDKGNIG--NEINIKENLKK-LKEEKLIEKEKFRETEKIGVLN-SG 1046
Query: 321 FRT----GTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKK 376
+ + G Y+R+E++ ++ + + ++ GGI E+ + R+K+HRW+ K
Sbjct: 1047 YGSSVNIGEYVRIELNIEKKKLAILKN--NLIICGGIQTYEEKDSLIHCRIKKHRWF-PK 1103
Query: 377 VLKSRDPIIVSIGWRRFQTIPVYAIEDRSG-RHRMLKYTPEHMHCLATFWGPLAPPQTGV 435
+L+S DP+I S+GWRR+Q+IP+Y+I +R+ R R LKYT EHMHC TF+GPLA +G+
Sbjct: 1104 LLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLKYTTEHMHCNCTFYGPLASVNSGI 1163
Query: 436 VAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEV 495
+A+ N +RI +++E N+ + I KK+KL+G P KIFK TA +K+MF SDLEV
Sbjct: 1164 LALYNYKK-VPFYRICINGLIIETNNNLNIMKKLKLIGEPYKIFKNTAFVKNMFNSDLEV 1222
Query: 496 AQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPL 555
+ G + K G RCTF D+I MSDIV ++ + +V+I +FY
Sbjct: 1223 CKFLNCPVVTPS-GIKGLIKNKINNNGDFRCTFADKIRMSDIVILKLYVNVKIKKFYY-- 1279
Query: 556 TTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALP 615
+KI K++ ELR +N I VN N+ Y+ I + I L LP
Sbjct: 1280 ---FDIENKI----KSINELRYLYN--IYVNHNNNYRSIPFRHFYHTKIQIKSKLLKDLP 1330
Query: 616 FESKPK 621
F+SKPK
Sbjct: 1331 FKSKPK 1336
Score = 40 (19.1 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 56 GEDENNHNVD--NHLSS 70
G+D NN+N D N+++S
Sbjct: 938 GDDNNNNNSDDDNNINS 954
Score = 38 (18.4 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 58 DENNHNVD-NHLSSG 71
D+NN N D N+++SG
Sbjct: 983 DDNNINSDDNNINSG 997
>UNIPROTKB|E2QYA6 [details] [associations]
symbol:E2QYA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030599 Uniprot:E2QYA6
Length = 656
Score = 252 (93.8 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 81/329 (24%), Positives = 154/329 (46%)
Query: 235 ENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-----EMNEKDGAK-FHCG--QPNEI 286
EN D+ A EE+ L+K ++ D ++P + + G K F P E
Sbjct: 313 ENVDDEA-EEKMLEKYKQERLQEMFPDEIDTPRDVAARIRFQKYRGLKSFRTSPWDPKE- 370
Query: 287 GLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCH 346
L +F+ N + E+ E+EG G Y+ + + +VP +VEYF
Sbjct: 371 NLPRDYARIFQFQNFTNTRK-RIFKEIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGA 429
Query: 347 PVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSG 406
P++ + EQ + + + + RH + + +K+++ +I G+RRF+ P+++ +
Sbjct: 430 PLIAFSLLPHEQKMSVLNMVVSRHPG-NIEPVKAKEDLIFHCGFRRFRASPLFSQHTAAD 488
Query: 407 RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIK 466
+H+ ++ + + T +GP+ P V+ + SN S + AT +L + + +
Sbjct: 489 KHKFQRFLTADVALVVTIYGPITFPPASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVI 546
Query: 467 KKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARC 526
K+I L G+P KIF K A+++ MF S +V + E + + G + K G +C
Sbjct: 547 KRIVLSGHPFKIFTKMAVVRYMFFSREDVLWFKPVEL-RTKWGRRGHIKEPLGTHGHMKC 605
Query: 527 TFEDRILMSDIVFMRGWADVEIPRF-YNP 554
+F+ ++ D V M + V P++ Y+P
Sbjct: 606 SFDGKLKSQDTVLMNLYKRV-FPKWTYDP 633
>UNIPROTKB|J9NS98 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AAEX03008382 RefSeq:XP_852531.1 Ensembl:ENSCAFT00000003327
GeneID:610048 KEGG:cfa:610048 Uniprot:J9NS98
Length = 801
Score = 254 (94.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 81/329 (24%), Positives = 154/329 (46%)
Query: 235 ENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-----EMNEKDGAK-FHCG--QPNEI 286
EN D+ A EE+ L+K ++ D ++P + + G K F P E
Sbjct: 458 ENVDDEA-EEKMLEKYKQERLQEMFPDEIDTPRDVAARIRFQKYRGLKSFRTSPWDPKE- 515
Query: 287 GLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCH 346
L +F+ N + E+ E+EG G Y+ + + +VP +VEYF
Sbjct: 516 NLPQDYARIFQFQNFTNTRK-RIFKEIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGA 574
Query: 347 PVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSG 406
P++ + EQ + + + + RH + + +K+++ +I G+RRF+ P+++ +
Sbjct: 575 PLIAFSLLPHEQKMSVLNMVVSRHPG-NIEPVKAKEDLIFHCGFRRFRASPLFSQHTAAD 633
Query: 407 RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIK 466
+H+ ++ + + T +GP+ P V+ + SN S + AT +L + + +
Sbjct: 634 KHKFQRFLTADVALVVTIYGPITFPPASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVI 691
Query: 467 KKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARC 526
K+I L G+P KIF K A+++ MF S +V + E + + G + K G +C
Sbjct: 692 KRIVLSGHPFKIFTKMAVVRYMFFSREDVLWFKPVEL-RTKWGRRGHIKEPLGTHGHMKC 750
Query: 527 TFEDRILMSDIVFMRGWADVEIPRF-YNP 554
+F+ ++ D V M + V P++ Y+P
Sbjct: 751 SFDGKLKSQDTVLMNLYKRV-FPKWTYDP 778
Score = 39 (18.8 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 137 EGNKLREGLDSGIVNTDDCSKIKSY 161
E +L + D+G V+ ++C S+
Sbjct: 95 EAFRLLQDTDTGTVHLNECGSTHSF 119
>UNIPROTKB|F1MSR6 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:DAAA02048673 EMBL:DAAA02048672 IPI:IPI00867224
Ensembl:ENSBTAT00000005534 ArrayExpress:F1MSR6 Uniprot:F1MSR6
Length = 804
Score = 238 (88.8 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 78/329 (23%), Positives = 153/329 (46%)
Query: 235 ENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-----EMNEKDGAK-FHCG--QPNEI 286
E DE A EE+ L+K + ++ D ++P + + G K F P E
Sbjct: 461 EKVDEEA-EEKMLEKYKQQRLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKE- 518
Query: 287 GLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCH 346
L +F+ +N E+ E+EG G Y+ + + +VP +VE+F
Sbjct: 519 NLPRDYARIFQFQNFINTRR-RIFKEIEEKEVEGAEVGWYVTLHVSEVPVSVVEHFKRGT 577
Query: 347 PVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSG 406
P++ + EQ + + + + RH + + +K+++ +I G+RRF+ P+++ +
Sbjct: 578 PLIAFSLLPHEQKMSVLNMVVSRHPG-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAAD 636
Query: 407 RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIK 466
+H+ ++ + T + P+ P V+ + SN S + AT +L + + +
Sbjct: 637 KHKFQRFLTADTALVVTVYAPITFPPASVLLFKQNSNGMHS--LIATGHLLSVDPDRMVI 694
Query: 467 KKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARC 526
K++ L G+P KIF KTA+++ MF + +V + E + + G + K G +C
Sbjct: 695 KRVVLSGHPFKIFTKTAVVRYMFFNREDVLWFKPVEL-RTKWGRRGHIKEPLGTHGHMKC 753
Query: 527 TFEDRILMSDIVFMRGWADVEIPRF-YNP 554
+F+ ++ D V M + V P++ Y+P
Sbjct: 754 SFDGKLKSQDTVLMNLYKRV-FPKWTYDP 781
>UNIPROTKB|Q2NL82 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 EMBL:CH471108 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP EMBL:AB037822
EMBL:BC019090 EMBL:BC110851 EMBL:BC126110 EMBL:AK001396
IPI:IPI00292894 RefSeq:NP_060598.3 UniGene:Hs.388170
ProteinModelPortal:Q2NL82 IntAct:Q2NL82 MINT:MINT-4860330
STRING:Q2NL82 PhosphoSite:Q2NL82 DMDM:121948971 PaxDb:Q2NL82
PeptideAtlas:Q2NL82 PRIDE:Q2NL82 DNASU:55720
Ensembl:ENST00000301364 GeneID:55720 KEGG:hsa:55720 UCSC:uc002fuj.3
CTD:55720 GeneCards:GC17M002225 HGNC:HGNC:25542 HPA:HPA024434
MIM:611214 neXtProt:NX_Q2NL82 PharmGKB:PA142670691
HOVERGEN:HBG099515 InParanoid:Q2NL82 OrthoDB:EOG4MKNFQ
GenomeRNAi:55720 NextBio:60619 PMAP-CutDB:Q2NL82 Bgee:Q2NL82
CleanEx:HS_TSR1 Genevestigator:Q2NL82 Uniprot:Q2NL82
Length = 804
Score = 229 (85.7 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 60/244 (24%), Positives = 124/244 (50%)
Query: 312 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 371
EV E+EG G Y+ + + +VP +VE F P++ + EQ + + + ++R
Sbjct: 543 EVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDP 602
Query: 372 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 431
+ + +K+++ +I G+RRF+ P+++ + +H++ ++ M +AT + P+ P
Sbjct: 603 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFP 661
Query: 432 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 491
V+ + SN S + AT ++ + + + K++ L G+P KIF K A+++ MF +
Sbjct: 662 PASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFN 719
Query: 492 DLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRF 551
+V + E + + G + K G +C+F+ ++ D V M + V P++
Sbjct: 720 REDVLWFKPVEL-RTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRV-FPKW 777
Query: 552 -YNP 554
Y+P
Sbjct: 778 TYDP 781
Score = 51 (23.0 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 235 ENEDESAVEERRLKKLSL-RAKFDVQYDGS--ESPEEEMNEK-DGAKFHCGQPNEIGLVD 290
E++DES+ EE + +++ + D YD E E +M EK + P+E+
Sbjct: 433 ESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPR 492
Query: 291 QMKEEIEFRK 300
+ I F+K
Sbjct: 493 DVAARIRFQK 502
>UNIPROTKB|Q5XGY1 [details] [associations]
symbol:tsr1 "Pre-rRNA-processing protein TSR1 homolog"
species:8355 "Xenopus laevis" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:BC084296 RefSeq:NP_001088282.1
UniGene:Xl.8091 ProteinModelPortal:Q5XGY1 PRIDE:Q5XGY1
GeneID:495115 KEGG:xla:495115 Xenbase:XB-GENE-5753645
Uniprot:Q5XGY1
Length = 815
Score = 227 (85.0 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 81/341 (23%), Positives = 158/341 (46%)
Query: 235 ENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKE 294
EN DE EE+ L+K L+ + +V D ++P +++ K+ + D +KE
Sbjct: 473 ENVDEQE-EEQMLEKYKLQRQDEVFPDEVDTPRDQIARIRFQKYRGLKSFRTSPWD-VKE 530
Query: 295 EIEFRKQMNIAELNDLDEVTRLEL--------EGFRTGTYLRMEIHDVPFEMVEYFDPCH 346
+ R I + +D TR + EG G Y+ + I VP ++E+F
Sbjct: 531 NLP-RDYARIFQFHDFFR-TRKRVFKEEEEKDEGAMVGWYVTVHISAVPVSVMEHFKHGL 588
Query: 347 PVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSG 406
P+++ + EQ + M + ++RH + + +K+++ +I G+RRF+ P+++ +
Sbjct: 589 PLVLCSLLPHEQKMSVMNMLVRRHPG-NNEPIKAKEELIFHCGFRRFRASPLFSQHSSAD 647
Query: 407 RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIK 466
+H+ ++ + T + P+ P V+ + N + AT +L N + +
Sbjct: 648 KHKSERFLRSDTSVVVTVYAPITFPPASVLVFKQRYNGMQD--LVATGSLLNVNPDRIVI 705
Query: 467 KKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARC 526
K+I L G+P KI K+TA+++ MF + +V + E + + G + K G +C
Sbjct: 706 KRIVLSGHPFKIMKRTAVVRYMFFNREDVLWFKPVEL-RTKWGRRGHIKEPLGTHGHMKC 764
Query: 527 TFEDRILMSDIVFMRGWADVEIPRF-YNPLTTALQPRDKIW 566
F+ ++ D V M + V P++ ++P PR W
Sbjct: 765 HFDGQLKSQDTVLMNLYKRV-YPKWTFDPYV----PRPVTW 800
>UNIPROTKB|Q5R434 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9601 "Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:CR861426 RefSeq:NP_001127041.1
UniGene:Pab.787 GeneID:100174068 KEGG:pon:100174068 Uniprot:Q5R434
Length = 805
Score = 226 (84.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 59/244 (24%), Positives = 123/244 (50%)
Query: 312 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 371
EV E+EG G Y+ + + +VP +VE F P++ + EQ + + + ++R
Sbjct: 544 EVEEKEVEGAEVGCYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDP 603
Query: 372 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 431
+ + +K+++ +I G+RRF+ P+++ + +H++ ++ M +AT + P+ P
Sbjct: 604 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFP 662
Query: 432 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 491
V+ + SN S + AT ++ + + + K++ L G+P K+F K A+++ MF +
Sbjct: 663 PASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVLSGHPLKMFTKMAVVRYMFFN 720
Query: 492 DLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRF 551
+V + E + + G + K G +C+F ++ D V M + V P++
Sbjct: 721 REDVLWFKPVEL-RTKWGRRGHIKEPLGTHGHMKCSFNGKLKSQDTVLMNLYKRV-FPKW 778
Query: 552 -YNP 554
Y+P
Sbjct: 779 TYDP 782
>UNIPROTKB|F1PXP0 [details] [associations]
symbol:F1PXP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030598 OMA:THEVERF Uniprot:F1PXP0
Length = 725
Score = 227 (85.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 68/269 (25%), Positives = 128/269 (47%)
Query: 235 ENEDESAVEERRLKKLSLRAKFDVQYDGSESPEE-----EMNEKDGAK-FHCG--QPNEI 286
EN D+ A EE+ L+K ++ D ++P + + G K F P E
Sbjct: 461 ENVDDEA-EEKMLEKYKQERLQEMFPDEIDTPRDVAARIRFQKYRGLKSFRTSPWDPKE- 518
Query: 287 GLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCH 346
L +F+ N + E+ E+EG G Y+ + + +VP +VEYF
Sbjct: 519 NLPRDYARIFQFQNFTNTRK-RIFKEIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGA 577
Query: 347 PVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSG 406
P++ + EQ + + + + RH + + +K+++ +I G+RRF+ P+++ +
Sbjct: 578 PLIAFSLLPHEQKMSVLNMVVSRHPG-NIEPVKAKEDLIFHCGFRRFRASPLFSQHTAAD 636
Query: 407 RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIK 466
+H+ ++ + + T +GP+ P V+ + SN S + AT +L + + +
Sbjct: 637 KHKFQRFLTADVALVVTIYGPITFPPASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVI 694
Query: 467 KKIKLVGYPCKIFKKTALIKDMFTSDLEV 495
K+I L G+P KIF K A+++ MF S +V
Sbjct: 695 KRIVLSGHPFKIFTKMAVVRYMFFSREDV 723
Score = 39 (18.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 137 EGNKLREGLDSGIVNTDDCSKIKSY 161
E +L + D+G V+ ++C S+
Sbjct: 98 EAFRLLQDTDTGTVHLNECGSTHSF 122
>MGI|MGI:2144566 [details] [associations]
symbol:Tsr1 "TSR1 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 MGI:MGI:2144566 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:AL604066
UniGene:Mm.220843 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 HOVERGEN:HBG099515
OrthoDB:EOG4MKNFQ EMBL:AK030545 EMBL:AK134365 EMBL:AK154063
EMBL:AK162686 EMBL:AK165662 EMBL:BC031531 EMBL:AK129350
IPI:IPI00420546 IPI:IPI00875206 IPI:IPI00875360 RefSeq:NP_796299.2
ProteinModelPortal:Q5SWD9 IntAct:Q5SWD9 STRING:Q5SWD9
PhosphoSite:Q5SWD9 PaxDb:Q5SWD9 PRIDE:Q5SWD9
Ensembl:ENSMUST00000045807 GeneID:104662 KEGG:mmu:104662
UCSC:uc007kcm.1 UCSC:uc007kcn.1 UCSC:uc007kco.1 InParanoid:Q5SWD9
NextBio:357196 Bgee:Q5SWD9 CleanEx:MM_TSR1 Genevestigator:Q5SWD9
Uniprot:Q5SWD9
Length = 803
Score = 220 (82.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 77/335 (22%), Positives = 152/335 (45%)
Query: 226 KDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMN-EK-DGAK-FHCG- 281
+D+ E ++ EDE + E+ K+ L F + D + +K G K F
Sbjct: 454 RDDLYDEKVDAEDEERMLEK-YKQERLEEMFPDEMDTPRDVAARIRFQKYRGLKSFRTSP 512
Query: 282 -QPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVE 340
P E L +F+ +N + E+ E EG G Y+ + + DVP +VE
Sbjct: 513 WDPKE-NLPRDYARIFQFQNFVNTRK-RIFKEIEEKEAEGAEVGWYVTLHVSDVPVSVVE 570
Query: 341 YFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYA 400
YF P++ + EQ + + + + R+ + + +K+++ +I G+RRF+ P+++
Sbjct: 571 YFRQGAPLIAFSLLPYEQKMSVLNMVVSRNPG-NTEPVKAKEELIFHCGFRRFRASPLFS 629
Query: 401 IEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFN 460
+ +H+ ++ + T + P+ P V+ + N S + AT + +
Sbjct: 630 QHTAADKHKFQRFLTADAAFVVTVFAPITFPPASVLLFKQRRNGMHS--LIATGHLFSVD 687
Query: 461 HEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPR 520
+ + K++ L G+P KIF K A+++ MF + +V + E + + G + K
Sbjct: 688 PDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVMWFKPVEL-RTKWGRRGHIKEPLGT 746
Query: 521 EGIARCTFEDRILMSDIVFMRGWADVEIPRF-YNP 554
G +C+F+ ++ D V M + V P++ Y+P
Sbjct: 747 HGHMKCSFDGKLKSQDTVLMNLYKRV-FPKWTYDP 780
>RGD|2322150 [details] [associations]
symbol:Tsr1 "TSR1, 20S rRNA accumulation, homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
RGD:2322150 GO:GO:0005634 GO:GO:0042254 EMBL:CH473948
InterPro:IPR007034 Pfam:PF04950 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 OrthoDB:EOG4MKNFQ
IPI:IPI00370294 RefSeq:XP_002724564.1 RefSeq:XP_002727820.1
UniGene:Rn.101331 Ensembl:ENSRNOT00000003992 GeneID:100360406
KEGG:rno:100360406 Uniprot:D3ZEM8
Length = 804
Score = 216 (81.1 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 79/347 (22%), Positives = 154/347 (44%)
Query: 226 KDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMN-EK-DGAK-FHCG- 281
+D+ E ++ EDE + E+ K+ L F + D + +K G K F
Sbjct: 455 RDDLYDEKVDEEDEERMLEK-YKQERLEEMFPDEMDTPRDVAARIRFQKYRGLKSFRTSP 513
Query: 282 -QPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVE 340
P E L +F+ +N + E+ E EG G Y+ + + +VP +VE
Sbjct: 514 WDPKE-NLPRDYARIFQFQNFVNTRK-RIFKEIEEKETEGAEVGWYVTLHVSNVPVSVVE 571
Query: 341 YFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYA 400
F P++ + EQ + + + + R + + +K+++ +I G+RRF+ P+++
Sbjct: 572 SFRQGAPLIAFSLLPYEQKMSVLNMVVSRSPG-NTEPVKAKEELIFHCGFRRFRASPLFS 630
Query: 401 IEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFN 460
+ +H+ ++ + T + P+ P V+ + N S + AT + +
Sbjct: 631 QHTAADKHKFQRFLTADAALVVTVFAPITFPPASVLLFKQRRNGMHS--LIATGHLFSVD 688
Query: 461 HEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPR 520
+ + K++ L G+P KIF KTA+++ MF S +V + E + + G + K
Sbjct: 689 PDRMVIKRVVLSGHPFKIFTKTAVVRYMFFSRDDVLWFKPVEL-RTKWGRRGHIKEPLGT 747
Query: 521 EGIARCTFEDRILMSDIVFMRGWADVEIPRF-YNPLTTALQPRDKIW 566
G +C+F+ ++ D V M + V P++ Y+P P +W
Sbjct: 748 HGHMKCSFDGKLKSQDTVLMNLYKRV-FPKWTYDPYV----PEPVLW 789
>UNIPROTKB|F1NNP8 [details] [associations]
symbol:LOC100857289 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AADN02025881 IPI:IPI00574494 Ensembl:ENSGALT00000005046
Uniprot:F1NNP8
Length = 803
Score = 202 (76.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 57/248 (22%), Positives = 121/248 (48%)
Query: 308 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 367
N ++ + E EG G Y+ + + +VP ++E F P+++ + EQ + + +
Sbjct: 538 NIFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGKPLVLFSLLPHEQKMSVLNFLV 597
Query: 368 KRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGP 427
+RH + +K+++ +I G+RRF+ P+++ + +H++ ++ + T + P
Sbjct: 598 RRHPS-NSDPVKAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRLDAALVVTVYAP 656
Query: 428 LAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKD 487
+ P V+ + SN + AT +L + + I K++ L G+P KIF K A+++
Sbjct: 657 ITFPPASVLVFKQRSNGMHD--LIATGSLLAVDPDRIIIKRLVLSGHPFKIFTKAAVVRY 714
Query: 488 MFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVE 547
MF + +V + E + + G + K G +C F+ ++ D V + + V
Sbjct: 715 MFFNREDVMWFKPVEL-RTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNLYKRV- 772
Query: 548 IPRF-YNP 554
P++ Y+P
Sbjct: 773 YPKWTYDP 780
Score = 55 (24.4 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 232 EGIENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEK-DGAKFHCGQPNEIGLVD 290
E E E+E A EE +S + D QYD +E+M EK + P+E+
Sbjct: 433 ESSEEEEELAEEECETMTVSECVRDD-QYDEKVEEDEQMLEKYKQERMDEMFPDEVDTPR 491
Query: 291 QMKEEIEFRK 300
+ + F+K
Sbjct: 492 DVPARVRFQK 501
Score = 47 (21.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 232 EGIENEDESAVEERRLKKLSL-RAKFDVQY---DGSESPEEEMNEKDGAKF 278
E ++ + S E +R+ K+ +K+ + DG E EEE ++ D F
Sbjct: 369 EELQEAEASQKENKRVVKVPKGTSKYQAAWIVDDGEEGSEEEDDDDDDDDF 419
>ZFIN|ZDB-GENE-030131-3762 [details] [associations]
symbol:tsr1 "TSR1, 20S rRNA accumulation, homolog
(yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
ZFIN:ZDB-GENE-030131-3762 GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074945
EMBL:CT027805 IPI:IPI00817275 PRIDE:E7FCX4
Ensembl:ENSDART00000052645 ArrayExpress:E7FCX4 Bgee:E7FCX4
Uniprot:E7FCX4
Length = 836
Score = 205 (77.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 55/239 (23%), Positives = 117/239 (48%)
Query: 317 ELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKK 376
E +G G Y+ + I DVP ++E F P+++ + EQ + M V +++H + +
Sbjct: 580 EEDGAMVGWYVTLHIVDVPPSVMESFQTGKPLVLVSLLPHEQKMSVMNVLVRQHPS-NTE 638
Query: 377 VLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVV 436
+KS++ ++ G+RRF+ +++ +H++ ++ + +F+ P+ P GV+
Sbjct: 639 PIKSKEELVFQCGFRRFRASAIFSQHTTGDKHKLERFLRPDAPTIMSFYAPITFPTAGVL 698
Query: 437 AVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVA 496
+ N + AT +L + + K+I L G+P KI +++A+++ MF + ++
Sbjct: 699 VFKQRDNGMQD--LVATGSLLSCDPRRVVLKRIVLSGHPFKINRRSAVVRYMFFNRDDIL 756
Query: 497 QCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRF-YNP 554
+ E + + G + K G +C F+ ++ D V M + V P + Y+P
Sbjct: 757 WFKPVEL-RTKWGRRGHIKEALGTHGHMKCVFDSQLRSQDTVLMNLYKRV-YPHWTYDP 813
Score = 52 (23.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 24/107 (22%), Positives = 46/107 (42%)
Query: 216 ETGEKQEGQRKDNSGCEGIENEDESAVE-ERRLKKLSLRAKFDVQYDGSESPEEEMNEKD 274
E G+ + D+ C+ +++D+ ++ E S A + +G + EEE E+
Sbjct: 421 EEGDGGDDGDDDDDSCDDDDDDDDEMMDDEMDGDNESQDAGSECASEGDDDDEEEEEEEI 480
Query: 275 GAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDL--DEV-TRLEL 318
+ G + EE E ++ A N++ DEV T L++
Sbjct: 481 SSTGRTGADQKYDEGMNESEEGEGLRRYREARANEMFPDEVDTPLDV 527
>TAIR|locus:2035893 [details] [associations]
symbol:AT1G42440 "AT1G42440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP EMBL:AF361826 EMBL:AY133551 EMBL:BT000755
IPI:IPI00527453 RefSeq:NP_564480.1 UniGene:At.19120
UniGene:At.67019 ProteinModelPortal:Q9ASU6 IntAct:Q9ASU6
STRING:Q9ASU6 PaxDb:Q9ASU6 PRIDE:Q9ASU6 EnsemblPlants:AT1G42440.1
GeneID:840848 KEGG:ath:AT1G42440 TAIR:At1g42440 InParanoid:Q9ASU6
PhylomeDB:Q9ASU6 ProtClustDB:CLSN2688391 ArrayExpress:Q9ASU6
Genevestigator:Q9ASU6 Uniprot:Q9ASU6
Length = 793
Score = 175 (66.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/222 (23%), Positives = 106/222 (47%)
Query: 324 GTYLRMEIHDVPF----EMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLK 379
G+Y+R+ I +VP ++ + P++ G+ E + + +K++ + + K
Sbjct: 556 GSYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMSVLHFSVKKYDGYEAPI-K 614
Query: 380 SRDPIIVSIGWRRFQTIPVYAIED-RSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAV 438
+++ ++ +G+R+F PV+A ++ S +H+M ++ LA+ +GP++ P +V +
Sbjct: 615 TKEELMFHVGFRQFIARPVFATDNFSSDKHKMERFLHPGCFSLASIYGPISFPPLPLVVL 674
Query: 439 QNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQC 498
+ +S IAA + I KKI L GYP ++ K A ++ MF + +V
Sbjct: 675 K-ISEGSDPPAIAALGSLKSVEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWF 733
Query: 499 EGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM 540
+ E + G + + K G +C F + D+V M
Sbjct: 734 KPVEVWSK-CGRRGRVKEPVGTHGAMKCIFNGVVQQHDVVCM 774
>FB|FBgn0037073 [details] [associations]
symbol:CG7338 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 EMBL:AE014296
GO:GO:0005730 GO:GO:0022008 GO:GO:0042255 InterPro:IPR007034
Pfam:PF04950 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 EMBL:BT003192 EMBL:BT044092
EMBL:AY058591 RefSeq:NP_649304.1 UniGene:Dm.1034
ProteinModelPortal:Q9VP47 IntAct:Q9VP47 MINT:MINT-823454
STRING:Q9VP47 PaxDb:Q9VP47 PRIDE:Q9VP47 EnsemblMetazoa:FBtr0078342
GeneID:40360 KEGG:dme:Dmel_CG7338 UCSC:CG7338-RA
FlyBase:FBgn0037073 InParanoid:Q9VP47 OrthoDB:EOG4QFTVF
PhylomeDB:Q9VP47 GenomeRNAi:40360 NextBio:818374 Bgee:Q9VP47
Uniprot:Q9VP47
Length = 814
Score = 177 (67.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 58/228 (25%), Positives = 105/228 (46%)
Query: 317 ELEGFRTGTYLRMEIHDVPFEMVEYFDPCH---PVLVGGIGLGEQNVGYMQVRLKRHRWW 373
E EG G Y+ + + +VP F ++V G+ E + M V L+R
Sbjct: 551 EFEGVLPGLYVTLYVINVPESRWNAFKSAQLMDNIIVYGMLPHEHQMCVMNVVLQRMP-- 608
Query: 374 HKKV-LKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 432
+V LKS++ +I+ G+RRF P+Y+ +H+ +Y + ATF+ P+ P
Sbjct: 609 DSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVCATFYAPIQFPP 668
Query: 433 TGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSD 492
V+A + N ++ + A +L N + + K++ L G+P +I +K+A I+ MF
Sbjct: 669 APVLAFK--VNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYK 726
Query: 493 LEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM 540
+V + + + + G K G +C F+ ++ D FM
Sbjct: 727 EDVEYFKPVKL-RTKCGRLGHIKESLGTHGHMKCYFDGQLRSYDTAFM 773
Score = 45 (20.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 237 EDESAVEERRLKKLSL--RA-KFDVQYDGSESPE-EEMNEKDG 275
EDE A + KK+ L R K +Y + P+ EE+ + DG
Sbjct: 362 EDEIAASQAETKKMKLVKRVPKGYSEYQAAWIPDVEEVEDPDG 404
>POMBASE|SPAC23H4.15 [details] [associations]
symbol:SPAC23H4.15 "ribosome biogenesis protein Tsr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISO]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 PomBase:SPAC23H4.15
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GO:GO:0043021
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:T38313
RefSeq:NP_593391.1 STRING:O13956 EnsemblFungi:SPAC23H4.15.1
GeneID:2541779 KEGG:spo:SPAC23H4.15 OrthoDB:EOG4BS0TS
NextBio:20802869 Uniprot:O13956
Length = 783
Score = 171 (65.3 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 71/317 (22%), Positives = 137/317 (43%)
Query: 235 ENEDESAVEERRLKKLSLRAKFD----VQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVD 290
E E+ EE R K+ L+ + + V+ +E E + G + + D
Sbjct: 451 EEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELARERFKKYRGLRSLYTSQWDADEYD 510
Query: 291 QMKEEIEFRKQMNIAELNDL-DEVTRLELEG-FRTGTYLRMEIHDVPFEMVEYFD-PCHP 347
E E+R+ +L ++ + G + G + +E+ +VP E+ EY++ P +
Sbjct: 511 P-NEPREWRQLFKFENYRNLKNKFLKQPFIGEAKPGKAVYVELRNVPIEIFEYYNKPWNL 569
Query: 348 VLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGR 407
+++ + E + Q +H + + + +S++ +++ IG RRF P+Y+ SG
Sbjct: 570 LVLYSLLQYENKLTVSQFTAMQHSEYEEPI-ESKEELLLQIGPRRFMVRPLYSDPTASGA 628
Query: 408 HRML----KYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEV 463
L +Y P +A+ P+ ++ + S+N S R+AAT + +
Sbjct: 629 SNNLQKYHRYLPPKQAVIASVISPIVFGNVPIIMFKKSSDN--SLRLAATGSYVNCDTNS 686
Query: 464 KIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGI 523
I K+ L G+P K+ KK I+ MF + +V + + ++ G K G
Sbjct: 687 VIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVIWFKPIQLFTKQ-GRTGYIKEPLGTHGY 745
Query: 524 ARCTFEDRILMSDIVFM 540
+ TF +I + D V M
Sbjct: 746 FKATFNGKITVQDTVAM 762
Score = 44 (20.5 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 135 KVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDR 179
++ + E +DS T D +K + + DL ++ YE R +
Sbjct: 420 EISNHVAEEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKK 464
Score = 39 (18.8 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 57 EDENNHNVDNHLS 69
ED++N + NH++
Sbjct: 414 EDQDNQEISNHVA 426
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 6 WNVLNLMMESILEKLSL 22
WNVL ++ SI + SL
Sbjct: 96 WNVLTNLLRSIDPEASL 112
>DICTYBASE|DDB_G0278331 [details] [associations]
symbol:DDB_G0278331 "Pre-rRNA-processing protein TSR1
homolog" species:44689 "Dictyostelium discoideum" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
dictyBase:DDB_G0278331 GO:GO:0005730 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0042254 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 KO:K14799 OMA:DAEQTWP RefSeq:XP_642295.1
STRING:Q54YA7 EnsemblProtists:DDB0205380 GeneID:8621502
KEGG:ddi:DDB_G0278331 ProtClustDB:CLSZ2729113 Uniprot:Q54YA7
Length = 826
Score = 162 (62.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 70/325 (21%), Positives = 139/325 (42%)
Query: 226 KDNSGCEGIENEDESAVEERRLKKLSLRAKFDVQY-DGSESPEEEMNEKDGAKFHCGQPN 284
KD+ + EN++E + +E ++ L+ ++ Y D ++P + +KF G +
Sbjct: 489 KDSDDEDDDENKEEQSEDEDEDERKQLQQD-EILYPDEVDTPGNVPSRIRFSKFR-GLKS 546
Query: 285 EIGLVDQMKEE--IEFRKQMNIAELNDL--DEVTRLELEGFRTGTYLRMEIHDVPFEMVE 340
+KE I++ K N + L+ + Y+R+ + + P ++VE
Sbjct: 547 FRSSPWDVKENLPIDYAKIFQFHSFNQSMRASIAILDNAPAKPDMYVRIHLVNGPKQLVE 606
Query: 341 YFDPC---HPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIP 397
P + G+ E + + +++H+ + + V +S++ + GWR+F T P
Sbjct: 607 RNTTAITTKPEVAVGLYRYENKISLLHFSVEKHKSYEETV-RSKEEVYFHFGWRKFSTSP 665
Query: 398 VYAIEDRS-GRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVV 456
+Y+I + + + K+ + +AT +GP+ P ++ N+ + AT +
Sbjct: 666 IYSISSPNCDKQKFEKFLLPARNTMATIYGPITYPPAPLLIFNGKDCNE----LVATGYL 721
Query: 457 LEFNHEVKIKKKIKLVGYPCK-IFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRK 515
N + I K+I L G K I KK +KDMF ++ + K ++G K
Sbjct: 722 SSVNPDRIICKRIILTGVIAKSISKKFVTVKDMFYYPEDINWFK-KVELYTKMGRVGHIK 780
Query: 516 GGQPREGIARCTFEDRILMSDIVFM 540
G +C F+ + D V M
Sbjct: 781 EPLGTHGRMKCQFDGTMNQQDTVCM 805
Score = 49 (22.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 135 KVEGNKLREGLDS-GIVNTDDCSKIKSYEDLKSWKQEEVYESIR 177
K+E N R+ + + IVN D + K + +KS K+ E+ E R
Sbjct: 36 KIETNGARQSIKNLAIVNNKDAMRQKHQKLVKS-KKNELLERKR 78
>SGD|S000002218 [details] [associations]
symbol:TSR1 "Protein required for processing of 20S pre-rRNA
in the cytoplasm" species:4932 "Saccharomyces cerevisiae"
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA;IDA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
SGD:S000002218 GO:GO:0005737 GO:GO:0005730 EMBL:BK006938
GO:GO:0043021 GO:GO:0030686 GO:GO:0006364 InterPro:IPR007034
Pfam:PF04950 EMBL:U53668 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
OrthoDB:EOG4BS0TS EMBL:Z74108 PIR:S67595 RefSeq:NP_010223.1
ProteinModelPortal:Q07381 DIP:DIP-6294N IntAct:Q07381
MINT:MINT-616207 STRING:Q07381 PaxDb:Q07381 PeptideAtlas:Q07381
EnsemblFungi:YDL060W GeneID:851499 KEGG:sce:YDL060W CYGD:YDL060w
NextBio:968840 Genevestigator:Q07381 GermOnline:YDL060W
Uniprot:Q07381
Length = 788
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 74/349 (21%), Positives = 139/349 (39%)
Query: 216 ETGEKQEGQRKDNSGCEGI--ENEDESAVEERRLKKLSLRAKFDVQYDGSESPEEEMNEK 273
E +E +DN G E + E E+ E R ++K +++ + SES E +
Sbjct: 442 EVAGDEEYDIEDNEGFEELSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRY 501
Query: 274 DGAK--FHCGQPNEIGLVDQMKEEIEFRKQMNIAEL----NDLDEVTRLELEGFRTGTYL 327
G K ++C ++ D E+++ + I N + + T+ E + G +
Sbjct: 502 RGLKNLYNCDW--QVDEKDP-SSPAEWKRLLRIGNYKNTKNRIIKETKNEAQAI-AGDRI 557
Query: 328 RMEIHDVPFEMVEYFDPCHPVL-VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIV 386
RM I F + + DP + V G+ L E + L+R + K V S++PI+V
Sbjct: 558 RMFIRFPKFLLEKIQDPKQLLFAVYGLLLHEHKNAVVNFSLQRWEQYDKPV-PSQEPIVV 616
Query: 387 SIGWRRFQTIPVYAIEDRSGR--HRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNN 444
G RR+ P+++ S H+ ++ +AT P+ Q+ + + +
Sbjct: 617 QYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATCIAPVDFTQSPAIFFKPSPTD 676
Query: 445 QASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAA 504
+ + L +H + K+ L G+P + K ++ MF +V +
Sbjct: 677 AKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVTVRYMFFRPEDVEWFKSIPLF 736
Query: 505 KEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM----RGWADVEIP 549
+ G K G + TF+ ++ D+V M R W +P
Sbjct: 737 TKS-GRSGFIKESLGTHGYFKATFDGKLSAQDVVAMSLYKRMWPMPSLP 784
>UNIPROTKB|Q61WR2 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:HE600920
RefSeq:XP_002630359.1 STRING:Q61WR2 EnsemblMetazoa:CBG04291
GeneID:8571874 KEGG:cbr:CBG04291 CTD:8571874 WormBase:CBG04291
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
Uniprot:Q61WR2
Length = 788
Score = 132 (51.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 48/234 (20%), Positives = 102/234 (43%)
Query: 308 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 367
ND+D + + F G + + I +VP ++E + +++ + EQ + + + L
Sbjct: 517 NDVDAGDAVIDKKFN-GVFASVYIENVPVSVMEAYKETKNLVLFQLLPHEQKMSILNMVL 575
Query: 368 KRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGP 427
K+H + I +G+R+F+ V + + ++ ++ P +AT + P
Sbjct: 576 KKHPSCTVPIGSEDQKFIFYVGFRQFEAHAVLSSNTPGDKFKLERFMPTEKTFVATVYAP 635
Query: 428 LA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIK 486
+ P T + Q+ Q + AT VL+ N + + K+ L G+P KI ++ +++
Sbjct: 636 ITFNPATVLCFRQDDKGRQ---ELVATGSVLDTNPDRIVLKRTVLSGHPYKINRRAVVVR 692
Query: 487 DMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM 540
MF + ++ + E G + K G +C F+ ++ D V +
Sbjct: 693 YMFFNREDIDWFKPVELYTPS-GRRGHIKEAVGTHGHMKCRFDQQLNAQDSVML 745
>WB|WBGene00006497 [details] [associations]
symbol:tag-151 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0009792 GO:GO:0040010 GO:GO:0005730 GO:GO:0040011
EMBL:FO081114 GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
PIR:C88131 RefSeq:NP_494840.1 ProteinModelPortal:Q19329
STRING:Q19329 PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1
EnsemblMetazoa:F10G7.1.2 GeneID:173812 KEGG:cel:CELE_F10G7.1
UCSC:F10G7.1.2 CTD:173812 WormBase:F10G7.1
GeneTree:ENSGT00550000074945 InParanoid:Q19329 NextBio:881217
Uniprot:Q19329
Length = 785
Score = 129 (50.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 51/257 (19%), Positives = 114/257 (44%)
Query: 308 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 367
ND+D + + + F G + + I +VP ++E + +++ + E + + + L
Sbjct: 514 NDVDADSVADKK-FN-GAFASVFIENVPVAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVL 571
Query: 368 KRHRWWHKKVLKSRDP-IIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWG 426
K+H + ++ I +G+R+F+ V++ + ++ ++ P +AT +
Sbjct: 572 KKHPSCTIPITSDQNQKFIFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYA 631
Query: 427 PLA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALI 485
P+ P T + Q+ Q + AT +L+ N + + K+ L G+P KI ++ ++
Sbjct: 632 PITFNPATVLCFRQDDKGRQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVV 688
Query: 486 KDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWAD 545
+ MF + ++ + E G + K G +C F+ ++ D V + +
Sbjct: 689 RYMFFNREDIEWFKPVELYTPS-GRRGHIKEAVGTHGNMKCRFDQQLNAQDSVMLNLYKR 747
Query: 546 VEIPRF-YNPLTTALQP 561
V P + Y+ +L P
Sbjct: 748 V-FPVWNYSIFNRSLNP 763
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 216 ETGEKQEGQRKDNSGCEGIENEDESAVEERR--LK-KLSLRAKFDVQYDGSESPEEEMNE 272
E E +E +D + E ED+S EE LK + ++ +D + +E++N
Sbjct: 379 EDDEDEEDSDEDMDDSDNEEVEDDSEEEEPMDDLKSEAGETTASEMMFD--DGIDEDINM 436
Query: 273 KDGAKF-----HCGQPNEIGLVDQMKEEIEFRK 300
+ K+ + P+E+ M I F+K
Sbjct: 437 AEVEKYRKERENAQWPDEVDTPMDMPARIAFQK 469
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 235 ENEDESAVEERRLKK--LSLRAKF---DVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLV 289
E +E+ E RR+ K S +A + D + E +E+M++ D + E +
Sbjct: 351 EELEEADKELRRVPKGTSSYQAAWILDDEDDEDEEDSDEDMDDSDNEEVEDDSEEEEPM- 409
Query: 290 DQMKEEIEFRKQMNIAELNDLDE-VTRLELEGFR 322
D +K E + + +DE + E+E +R
Sbjct: 410 DDLKSEAGETTASEMMFDDGIDEDINMAEVEKYR 443
>UNIPROTKB|Q19329 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6239 "Caenorhabditis elegans" [GO:0042255 "ribosome
assembly" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0009792
GO:GO:0040010 GO:GO:0005730 GO:GO:0040011 EMBL:FO081114
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:C88131
RefSeq:NP_494840.1 ProteinModelPortal:Q19329 STRING:Q19329
PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1 EnsemblMetazoa:F10G7.1.2
GeneID:173812 KEGG:cel:CELE_F10G7.1 UCSC:F10G7.1.2 CTD:173812
WormBase:F10G7.1 GeneTree:ENSGT00550000074945 InParanoid:Q19329
NextBio:881217 Uniprot:Q19329
Length = 785
Score = 129 (50.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 51/257 (19%), Positives = 114/257 (44%)
Query: 308 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 367
ND+D + + + F G + + I +VP ++E + +++ + E + + + L
Sbjct: 514 NDVDADSVADKK-FN-GAFASVFIENVPVAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVL 571
Query: 368 KRHRWWHKKVLKSRDP-IIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWG 426
K+H + ++ I +G+R+F+ V++ + ++ ++ P +AT +
Sbjct: 572 KKHPSCTIPITSDQNQKFIFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYA 631
Query: 427 PLA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALI 485
P+ P T + Q+ Q + AT +L+ N + + K+ L G+P KI ++ ++
Sbjct: 632 PITFNPATVLCFRQDDKGRQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVV 688
Query: 486 KDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWAD 545
+ MF + ++ + E G + K G +C F+ ++ D V + +
Sbjct: 689 RYMFFNREDIEWFKPVELYTPS-GRRGHIKEAVGTHGNMKCRFDQQLNAQDSVMLNLYKR 747
Query: 546 VEIPRF-YNPLTTALQP 561
V P + Y+ +L P
Sbjct: 748 V-FPVWNYSIFNRSLNP 763
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 216 ETGEKQEGQRKDNSGCEGIENEDESAVEERR--LK-KLSLRAKFDVQYDGSESPEEEMNE 272
E E +E +D + E ED+S EE LK + ++ +D + +E++N
Sbjct: 379 EDDEDEEDSDEDMDDSDNEEVEDDSEEEEPMDDLKSEAGETTASEMMFD--DGIDEDINM 436
Query: 273 KDGAKF-----HCGQPNEIGLVDQMKEEIEFRK 300
+ K+ + P+E+ M I F+K
Sbjct: 437 AEVEKYRKERENAQWPDEVDTPMDMPARIAFQK 469
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 235 ENEDESAVEERRLKK--LSLRAKF---DVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLV 289
E +E+ E RR+ K S +A + D + E +E+M++ D + E +
Sbjct: 351 EELEEADKELRRVPKGTSSYQAAWILDDEDDEDEEDSDEDMDDSDNEEVEDDSEEEEPM- 409
Query: 290 DQMKEEIEFRKQMNIAELNDLDE-VTRLELEGFR 322
D +K E + + +DE + E+E +R
Sbjct: 410 DDLKSEAGETTASEMMFDDGIDEDINMAEVEKYR 443
>UNIPROTKB|G4NCG9 [details] [associations]
symbol:MGG_01087 "Ribosome biogenesis protein TSR1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISS]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005737 GO:GO:0005730
EMBL:CM001235 GO:GO:0043581 GO:GO:0043021 GO:GO:0006364
InterPro:IPR007034 Pfam:PF04950 KO:K14799 RefSeq:XP_003717850.1
EnsemblFungi:MGG_01087T0 GeneID:2674231 KEGG:mgr:MGG_01087
Uniprot:G4NCG9
Length = 810
Score = 122 (48.0 bits), Expect = 0.00074, P = 0.00074
Identities = 57/271 (21%), Positives = 108/271 (39%)
Query: 290 DQMKEEIEFRKQMNIAELN-DLDEVTRLELEG-FRTGTYLRMEIHDVPFEMVEYFDPCHP 347
D+ E ++R+ + + + N TR L G GT + + + VP + +D P
Sbjct: 519 DRAHEPEDWRRLLQVPDYNGSKSRCTREALVGGVAPGTRVAVHLKGVPASVAASYDGRKP 578
Query: 348 VLVGGIGLGE--QNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRS 405
+ + + E Q+V + L + LK+++ +++ G RR P+++ +
Sbjct: 579 ITMFSLLRHENKQSVVNFLINLSSE---FPRSLKAKEELVIQYGPRRLVINPLFSQGGNT 635
Query: 406 GR--HRMLKYTPEHMHCLATFWGPLA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHE 462
H+ ++ +ATF GP+ P + + ++ S + T L +
Sbjct: 636 PNDVHKYGRFLHPGQSAVATFVGPVIWGPVPALFFKKQEGSDDLSLTLVGTGTALPPSTG 695
Query: 463 VKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEAAKEEIGNQPKRKGGQPREG 522
+ K++ L G+P I KK I+ MF + +V + G K G
Sbjct: 696 RVVAKRVILTGHPYHIHKKIVTIRYMFFNREDVEWFKALPLWTRR-GRSGYFKEALGTHG 754
Query: 523 IARCTFEDRILMSDIV----FMRGWADVEIP 549
+ TF+ RI D V + R W +P
Sbjct: 755 YFKATFDGRINPQDSVGVSLYKRVWPRKSVP 785
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 714 607 0.00087 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 624 (66 KB)
Total size of DFA: 343 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.07u 0.10s 50.17t Elapsed: 00:00:02
Total cpu time: 50.08u 0.10s 50.18t Elapsed: 00:00:02
Start: Sat May 11 10:29:19 2013 End: Sat May 11 10:29:21 2013