BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005102
(714 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 161/302 (53%), Gaps = 35/302 (11%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVTLRAYY 468
+LG+ G G VYK L DG +AV+RL E +Q + +FQTEVE I H N++ LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ E+LL+Y Y+ NGS+A+ L +P S P+ W R +I G A+GL YLH+ K
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+K +NILL E V DFGLA+L + K +
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----------------------KDXHVX 192
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTA---VVQVGSSEMD 645
++ APE L K S+K D++ YGV+LLE+ITG+ A ++
Sbjct: 193 XAVRGXIGHI-----APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705
L++W++ ++EKK L ++D L + K+EE+ ++++A+ C SSP +RP M +
Sbjct: 248 LLDWVKGLLKEKK-LEALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 706 LD 707
L+
Sbjct: 306 LE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 167/319 (52%), Gaps = 40/319 (12%)
Query: 398 FDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFK-EFQTEVE 451
F L EL AS +LG+ G G VYK L DG +AV+RL E Q + +FQTEVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 452 AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKII 511
I H N++ LR + + E+LL+Y Y+ NGS+A+ L +P S P+ W R +I
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIA 145
Query: 512 KGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNR 571
G A+GL YLH+ K +H D+K +NILL E V DFGLA+L +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----------- 194
Query: 572 MPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
K + + ++ APE L K S+K D++ YGV+LLE+IT
Sbjct: 195 -----------KDXHVXXAVRGTIGHI-----APEYLSTGKSSEKTDVFGYGVMLLELIT 238
Query: 632 GRTA---VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMAC 688
G+ A ++ L++W++ ++EKK L ++D L + K+EE+ ++++A+ C
Sbjct: 239 GQRAFDLARLANDDDVMLLDWVKGLLKEKK-LEALVDVDLQGNY-KDEEVEQLIQVALLC 296
Query: 689 VHSSPEKRPTMRHISDALD 707
SSP +RP M + L+
Sbjct: 297 TQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 49/310 (15%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG---EGGSQRFKE-FQTEVEAIGKIRHSNIVTLRA 466
+G+ G G+VYK + + T+AV++L + ++ K+ F E++ + K +H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 467 YYWSVDEKLLIYDYIPNGSL---ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
+ D+ L+Y Y+PNGSL + L G P P+ W +R KI +G A G+ +LHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP------PLSWHMRCKIAQGAANGINFLHE 151
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
++H D+K +NILL +SDFGLAR + + T+ +R+
Sbjct: 152 ---NHHIHRDIKSANILLDEAFTAKISDFGLARASE--KFAQTVMXSRI----------- 195
Query: 584 SVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642
V TT Y APE+L+ + P K DIYS+GV+LLE+ITG AV +
Sbjct: 196 -----VGTT--------AYMAPEALRGEITP--KSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
++ L++ + +E+K + D +D + DAD + A+ +A C+H KRP ++ +
Sbjct: 241 QL-LLDIKEEIEDEEKTIEDYIDKKM-NDADS-TSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 703 SDALDRLIVS 712
L + S
Sbjct: 298 QQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 158/310 (50%), Gaps = 49/310 (15%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG---EGGSQRFKE-FQTEVEAIGKIRHSNIVTLRA 466
+G+ G G+VYK + + T+AV++L + ++ K+ F E++ + K +H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 467 YYWSVDEKLLIYDYIPNGSL---ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
+ D+ L+Y Y+PNGSL + L G P P+ W +R KI +G A G+ +LHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP------PLSWHMRCKIAQGAANGINFLHE 151
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
++H D+K +NILL +SDFGLAR + ++ Q
Sbjct: 152 ---NHHIHRDIKSANILLDEAFTAKISDFGLARAS-------------------EKFAQT 189
Query: 584 SVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642
+ + T + Y APE+L+ + P K DIYS+GV+LLE+ITG AV +
Sbjct: 190 VMXXRIVGTTA-------YMAPEALRGEITP--KSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
++ L++ + +E+K + D +D + DAD + A+ +A C+H KRP ++ +
Sbjct: 241 QL-LLDIKEEIEDEEKTIEDYIDKKM-NDADS-TSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 703 SDALDRLIVS 712
L + S
Sbjct: 298 QQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 158/310 (50%), Gaps = 49/310 (15%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG---EGGSQRFKE-FQTEVEAIGKIRHSNIVTLRA 466
+G+ G G+VYK + + T+AV++L + ++ K+ F E++ + K +H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 467 YYWSVDEKLLIYDYIPNGSL---ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
+ D+ L+Y Y+PNGSL + L G P P+ W +R KI +G A G+ +LHE
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP------PLSWHMRCKIAQGAANGINFLHE 145
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
++H D+K +NILL +SDFGLAR + ++ Q
Sbjct: 146 ---NHHIHRDIKSANILLDEAFTAKISDFGLARAS-------------------EKFAQX 183
Query: 584 SVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642
+ + T + Y APE+L+ + P K DIYS+GV+LLE+ITG AV +
Sbjct: 184 VMXXRIVGTTA-------YMAPEALRGEITP--KSDIYSFGVVLLEIITGLPAVDEHREP 234
Query: 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
++ L++ + +E+K + D +D + DAD + A+ +A C+H KRP ++ +
Sbjct: 235 QL-LLDIKEEIEDEEKTIEDYIDKKM-NDADS-TSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 703 SDALDRLIVS 712
L + S
Sbjct: 292 QQLLQEMTAS 301
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 40/295 (13%)
Query: 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
F++G G VYK VL DG +A++R SQ +EF+TE+E + RH ++V+L +
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 469 WSVDEKLLIYDYIPNGSLATALHGK--PGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
+E +LIY Y+ NG+L L+G P M + W R++I G A+GL YLH
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTM----SMSWEQRLEICIGAARGLHYLH---T 157
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+ +H D+K NILL N P ++DFG+++ K E Q +
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISK-------------------KGTELDQTHLX 198
Query: 587 LEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
V T LG Y PE + ++K D+YS+GV+L E++ R+A+VQ EM
Sbjct: 199 XVVKGT-----LG--YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-- 249
Query: 647 VNWMQLCIEEKK--PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699
VN + +E L ++DP LA D + E + A+ C+ S E RP+M
Sbjct: 250 VNLAEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 40/295 (13%)
Query: 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
F++G G VYK VL DG +A++R SQ +EF+TE+E + RH ++V+L +
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 469 WSVDEKLLIYDYIPNGSLATALHGK--PGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
+E +LIY Y+ NG+L L+G P M + W R++I G A+GL YLH
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTM----SMSWEQRLEICIGAARGLHYLH---T 157
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+ +H D+K NILL N P ++DFG+++ K E Q +
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISK-------------------KGTELGQTHLX 198
Query: 587 LEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
V T LG Y PE + ++K D+YS+GV+L E++ R+A+VQ EM
Sbjct: 199 XVVKGT-----LG--YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-- 249
Query: 647 VNWMQLCIEEKK--PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699
VN + +E L ++DP LA D + E + A+ C+ S E RP+M
Sbjct: 250 VNLAEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 150/309 (48%), Gaps = 49/309 (15%)
Query: 412 GKSGIGIVYKVVLEDGHTLAVRRLG---EGGSQRFKE-FQTEVEAIGKIRHSNIVTLRAY 467
G+ G G+VYK + + T+AV++L + ++ K+ F E++ K +H N+V L +
Sbjct: 31 GEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 468 YWSVDEKLLIYDYIPNGSL---ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEF 524
D+ L+Y Y PNGSL + L G P P+ W R KI +G A G+ +LHE
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTP------PLSWHXRCKIAQGAANGINFLHE- 142
Query: 525 SPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
++H D+K +NILL +SDFGLAR +EK + S
Sbjct: 143 --NHHIHRDIKSANILLDEAFTAKISDFGLAR----------------ASEKFAQXVXXS 184
Query: 585 VSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643
+ T Y APE+L+ + P K DIYS+GV+LLE+ITG AV + +
Sbjct: 185 RIVGTTA----------YXAPEALRGEITP--KSDIYSFGVVLLEIITGLPAVDEHREPQ 232
Query: 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703
+ L++ + +E+K + D +D DAD + A +A C+H KRP ++ +
Sbjct: 233 L-LLDIKEEIEDEEKTIEDYIDKK-XNDADS-TSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 704 DALDRLIVS 712
L S
Sbjct: 290 QLLQEXTAS 298
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSV 128
+S+ +L G +P +G L +L + L NN F G++P EL + + L L L N F+G++
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 129 P------------NEIGKLKYLQI----------------------------------LD 142
P N I +Y+ I +
Sbjct: 552 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 611
Query: 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202
++ + G + + LD+S N +G +P GS + L LNL N +GSIP
Sbjct: 612 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIP 670
Query: 203 SNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPT 262
G+L L +D S N G IP ++ L IDL+ NNLSGPIP+ G P
Sbjct: 671 DEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 729
Query: 263 AFIGNPRLCGPPL 275
F+ NP LCG PL
Sbjct: 730 KFLNNPGLCGYPL 742
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 90 LRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFN 149
L+ + L+NN F G +P L L SL L N SG++P+ +G L L+ L L N
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 150 GSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLS 209
G +P ++ K L+ L L N+ TG +P+G S +L ++LS N+ G IP G L
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLE 511
Query: 210 SLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIP 251
+L + S+N FSG+IPA LG+ +++DL N +G IP
Sbjct: 512 NL-AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 69 VSIPKKKLLGFLPSAL-GSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGS 127
+S+ + K G +P L G+ L ++L N F+G++P L+SL L N+FSG
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 128 VP-NEIGKLKYLQILDLSQNFFNGSLPVSIVQCK-RLKALDLSQNNFTGP-LPNGFGSGL 184
+P + + K++ L++LDLS N F+G LP S+ L LDLS NNF+GP LPN +
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 185 VSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYN 244
+L++L L N F G IP N S L ++ S N SG+IP+SLG+L + + L N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 449
Query: 245 NLSGPIPQ 252
L G IPQ
Sbjct: 450 MLEGEIPQ 457
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 107/211 (50%), Gaps = 29/211 (13%)
Query: 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSV 128
+ I KL G A+ + T+L+ +N+ +N+F G P+ L + LQ L L N F+G +
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQYLSLAENKFTGEI 282
Query: 129 PNEI-GKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSL 187
P+ + G L LDLS N F G++P C L++L LS NNF+G LP + L
Sbjct: 283 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 342
Query: 188 EKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS------------------------ 223
+ L+LSFN+F+G +P + NLS+ T+D S N FS
Sbjct: 343 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 402
Query: 224 --GSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252
G IP +L N E V + L++N LSG IP
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 51/252 (20%)
Query: 61 CKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLY 120
C E +VS+ + L G +PS+LGSL+ LR + L N G +P EL+ + L++L+L
Sbjct: 414 CSE--LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 121 GNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGF 180
N +G +P+ + L + LS N G +P I + + L L LS N+F+G +P
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 181 GSGLVSLEKLNLSFNKFNGSIPS--------------------------------NTGNL 208
G SL L+L+ N FNG+IP+ GNL
Sbjct: 532 GD-CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 590
Query: 209 SSLQGT-------------VDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA 255
QG + + ++ G + N +++D++YN LSG IP+
Sbjct: 591 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG 650
Query: 256 LMNRGPTAFIGN 267
M P FI N
Sbjct: 651 SM---PYLFILN 659
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 89 DLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148
+L+H+ + NK G + ++ L+ L + N+FS +P +G LQ LD+S N
Sbjct: 176 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKL 232
Query: 149 NGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSN-TGN 207
+G +I C LK L++S N F GP+P L SL+ L+L+ NKF G IP +G
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 208 LSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRG 260
+L G +D S N F G++P G+ + L+ NN SG +P + L RG
Sbjct: 290 CDTLTG-LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 341
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 90 LRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFN 149
L+ + L+NN F G +P L L SL L N SG++P+ +G L L+ L L N
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 150 GSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLS 209
G +P ++ K L+ L L N+ TG +P+G S +L ++LS N+ G IP G L
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLE 514
Query: 210 SLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIP 251
+L + S+N FSG+IPA LG+ +++DL N +G IP
Sbjct: 515 NL-AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSV 128
+S+ +L G +P +G L +L + L NN F G++P EL + + L L L N F+G++
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 129 P------------NEIGKLKYLQI----------------------------------LD 142
P N I +Y+ I +
Sbjct: 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202
++ + G + + LD+S N +G +P GS + L LNL N +GSIP
Sbjct: 615 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIP 673
Query: 203 SNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPT 262
G+L L +D S N G IP ++ L IDL+ NNLSGPIP+ G P
Sbjct: 674 DEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732
Query: 263 AFIGNPRLCGPPL 275
F+ NP LCG PL
Sbjct: 733 KFLNNPGLCGYPL 745
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 69 VSIPKKKLLGFLPSAL-GSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGS 127
+S+ + K G +P L G+ L ++L N F+G++P L+SL L N+FSG
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 128 VP-NEIGKLKYLQILDLSQNFFNGSLPVSIVQ-CKRLKALDLSQNNFTGP-LPNGFGSGL 184
+P + + K++ L++LDLS N F+G LP S+ L LDLS NNF+GP LPN +
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 185 VSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYN 244
+L++L L N F G IP N S L ++ S N SG+IP+SLG+L + + L N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 245 NLSGPIPQ 252
L G IPQ
Sbjct: 453 MLEGEIPQ 460
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 107/211 (50%), Gaps = 29/211 (13%)
Query: 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSV 128
+ I KL G A+ + T+L+ +N+ +N+F G P+ L + LQ L L N F+G +
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKSLQYLSLAENKFTGEI 285
Query: 129 PNEI-GKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSL 187
P+ + G L LDLS N F G++P C L++L LS NNF+G LP + L
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345
Query: 188 EKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS------------------------ 223
+ L+LSFN+F+G +P + NLS+ T+D S N FS
Sbjct: 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 405
Query: 224 --GSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252
G IP +L N E V + L++N LSG IP
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 51/252 (20%)
Query: 61 CKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLY 120
C E +VS+ + L G +PS+LGSL+ LR + L N G +P EL+ + L++L+L
Sbjct: 417 CSE--LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 121 GNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGF 180
N +G +P+ + L + LS N G +P I + + L L LS N+F+G +P
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 181 GSGLVSLEKLNLSFNKFNGSIPS--------------------------------NTGNL 208
G SL L+L+ N FNG+IP+ GNL
Sbjct: 535 GD-CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593
Query: 209 SSLQGT-------------VDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA 255
QG + + ++ G + N +++D++YN LSG IP+
Sbjct: 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG 653
Query: 256 LMNRGPTAFIGN 267
M P FI N
Sbjct: 654 SM---PYLFILN 662
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 89 DLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148
+L+H+ + NK G + ++ L+ L + N+FS +P +G LQ LD+S N
Sbjct: 179 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKL 235
Query: 149 NGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSN-TGN 207
+G +I C LK L++S N F GP+P L SL+ L+L+ NKF G IP +G
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 208 LSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRG 260
+L G +D S N F G++P G+ + L+ NN SG +P + L RG
Sbjct: 293 CDTLTG-LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 119/302 (39%), Gaps = 40/302 (13%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
VLGK G KV E G + ++ L + + F EV+ + + H N++
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ I +YI G+L + + PWS RV K IA G+ YLH +
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMD-----SQYPWSQRVSFAKDIASGMAYLHSMN--- 128
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H DL N L+ N V+DFGLARL M EK Q +S+
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARL--------------MVDEKTQPEGLRSLKKP 174
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL-V 647
+ Y+ APE + +K D++S+G++L E+I A MD +
Sbjct: 175 DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL 234
Query: 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707
N + LD Y P+ + I + C PEKRP+ + L+
Sbjct: 235 N-----------VRGFLDRYCPPNCPP-----SFFPITVRCCDLDPEKRPSFVKLEHWLE 278
Query: 708 RL 709
L
Sbjct: 279 TL 280
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 57/312 (18%)
Query: 410 VLGKSGIGIVYKVVLEDGH-----TLAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
V+G G VYK +L+ +A++ L G +++ + +F E +G+ H NI+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
L ++I +Y+ NG+L L K G S + V +++GIA G+ YL
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-----VGMLRGIAAGMKYLAN 165
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
+ YVH DL NIL+ N+ VSDFGL+R+ + P
Sbjct: 166 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE---------------DDP------ 201
Query: 584 SVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSS 642
E T T S + + APE++ K + D++S+G+++ E++T G ++ +
Sbjct: 202 ----EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 257
Query: 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
E + I + L +D P A+ ++ M C +RP I
Sbjct: 258 E------VMKAINDGFRLPTPMD---CPS--------AIYQLMMQCWQQERARRPKFADI 300
Query: 703 SDALDRLIVSSD 714
LD+LI + D
Sbjct: 301 VSILDKLIRAPD 312
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 50/283 (17%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G ++R +EF +E +G+ H NI+ L + +++ +++ NG+L +
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++GIA G+ YL E S YVH DL NIL+ N+
Sbjct: 107 FLRLNDGQFTVIQL-----VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCK 158
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R PT T++ + + APE++
Sbjct: 159 VSDFGLSRFLEENSSDPT-----------------------ETSSLGGKIPIRWTAPEAI 195
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
K + D +SYG+++ E+++ G + S D++N IE+ D
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDM--SNQDVIN----AIEQ--------DYR 241
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
L P D ++ ++ + C RP + ALD++I
Sbjct: 242 LPPPPDCP---TSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 50/283 (17%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G ++R +EF +E +G+ H NI+ L + +++ +++ NG+L +
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++GIA G+ YL E S YVH DL NIL+ N+
Sbjct: 105 FLRLNDGQFTVIQL-----VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCK 156
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R PT T++ + + APE++
Sbjct: 157 VSDFGLSRFLEENSSDPTY-----------------------TSSLGGKIPIRWTAPEAI 193
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
K + D +SYG+++ E+++ G + S D++N IE+ D
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDM--SNQDVIN----AIEQ--------DYR 239
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
L P D ++ ++ + C RP + ALD++I
Sbjct: 240 LPPPPDCP---TSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 50/283 (17%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G +++ ++F +E +G+ H N++ L ++I +++ NGSL +
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++GIA G+ YL + + YVH DL NIL+ N+
Sbjct: 124 FLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCK 175
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R PT T+ + + APE++
Sbjct: 176 VSDFGLSRFLEDDTSDPTY-----------------------TSALGGKIPIRWTAPEAI 212
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
+ K + D++SYG+++ E+++ G + + D++N IE+ D
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--TNQDVIN----AIEQ--------DYR 258
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
L P D A+ ++ + C RP I + LD++I
Sbjct: 259 LPPPMDCPS---ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 52/283 (18%)
Query: 430 LAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G + ++ ++F +E +G+ H NI+ L ++I +Y+ NGSL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++GI G+ YL + S YVH DL NIL+ N+
Sbjct: 99 FLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCK 150
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFG++R+ + P E T + + APE++
Sbjct: 151 VSDFGMSRVLE---------------DDP----------EAAYTTRGGKIPIRWTAPEAI 185
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
K + D++SYG+++ E+++ G + S D++ IEE L +D
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVIK----AIEEGYRLPPPMD-- 237
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P IA+ ++ + C RP I + LD+LI
Sbjct: 238 -CP--------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 129/313 (41%), Gaps = 62/313 (19%)
Query: 399 DLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH 458
+ E+ V GK I + K L+ G+T RR +F +E +G+ H
Sbjct: 26 EFGEVCSGRLKVPGKREICVAIKT-LKAGYTDKQRR----------DFLSEASIMGQFDH 74
Query: 459 SNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
NI+ L ++I +Y+ NGSL L G + + V +++GI G+
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGM 129
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
YL + S YVH DL NIL+ N+ VSDFG++R+ + P
Sbjct: 130 KYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLE---------------DDP- 170
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVV 637
E T + + APE++ K + D++SYG+++ E+++ G
Sbjct: 171 ---------EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 221
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ S D++ IEE L +D P IA+ ++ + C RP
Sbjct: 222 DM--SNQDVIK----AIEEGYRLPPPMD---CP--------IALHQLMLDCWQKERSDRP 264
Query: 698 TMRHISDALDRLI 710
I + LD+LI
Sbjct: 265 KFGQIVNMLDKLI 277
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 61/305 (20%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
V+G+ G+V K +A++++ E S+R K F E+ + ++ H NIV L Y
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQI-ESESER-KAFIVELRQLSRVNHPNIVKL--YGA 69
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTP---VPWSVRVKIIKGIAKGLVYLHEFSP 526
++ L+ +Y GSL LHG + +T + W ++ ++G+ YLH P
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQP 123
Query: 527 KKYVHGDLKPSNILL-GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
K +H DLKP N+LL + DFG A
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTA------------------------------ 153
Query: 586 SLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
++ T +++ + + APE + S+K D++S+G+IL E+IT R ++G
Sbjct: 154 -CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 212
Query: 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705
++ W + + P L + K E + C P +RP+M I
Sbjct: 213 IM-WA---------VHNGTRPPLIKNLPKPIE-----SLMTRCWSKDPSQRPSMEEIVKI 257
Query: 706 LDRLI 710
+ L+
Sbjct: 258 MTHLM 262
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 61/305 (20%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
V+G+ G+V K +A++++ E S+R K F E+ + ++ H NIV L Y
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIKQI-ESESER-KAFIVELRQLSRVNHPNIVKL--YGA 70
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTP---VPWSVRVKIIKGIAKGLVYLHEFSP 526
++ L+ +Y GSL LHG + +T + W ++ ++G+ YLH P
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQP 124
Query: 527 KKYVHGDLKPSNILL-GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
K +H DLKP N+LL + DFG A
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTA------------------------------ 154
Query: 586 SLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
++ T +++ + + APE + S+K D++S+G+IL E+IT R ++G
Sbjct: 155 -CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 213
Query: 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705
++ W + + P L + K E + C P +RP+M I
Sbjct: 214 IM-WA---------VHNGTRPPLIKNLPKPIE-----SLMTRCWSKDPSQRPSMEEIVKI 258
Query: 706 LDRLI 710
+ L+
Sbjct: 259 MTHLM 263
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 102 SLRDYLQAHAERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 154 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 188
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 106 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 157
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 158 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 192
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 105 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 156
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 157 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 191
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 104 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 155
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 156 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 190
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 102 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 154 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 188
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 99 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 151 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 185
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 99 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 151 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 185
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 130 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 181
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 182 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 216
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 98 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 149
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 150 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 184
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 103 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 154
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 155 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 189
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 97 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 148
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 149 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 183
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 117 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 168
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 169 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 203
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 52/283 (18%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL T
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++GI+ G+ YL + YVH DL NIL+ N+
Sbjct: 113 FLKKNDGQFTVIQL-----VGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCK 164
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R+ + P E T + + APE++
Sbjct: 165 VSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTAPEAI 199
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
K + D++SYG+++ E+++ G ++ + D++ +EE L +D
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEM--TNQDVIK----AVEEGYRLPSPMD-- 251
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I + LD+LI
Sbjct: 252 -CP--------AALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 117 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 168
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 169 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 203
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 50/283 (17%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G +++ ++F +E +G+ H N++ L ++I +++ NGSL +
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++GIA G+ YL + + YVH L NIL+ N+
Sbjct: 98 FLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCK 149
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R PT T+ + + APE++
Sbjct: 150 VSDFGLSRFLEDDTSDPTY-----------------------TSALGGKIPIRWTAPEAI 186
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
+ K + D++SYG+++ E+++ G + + D++N IE+ D
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--TNQDVIN----AIEQ--------DYR 232
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
L P D A+ ++ + C RP I + LD++I
Sbjct: 233 LPPPMDCPS---ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 70/315 (22%)
Query: 411 LGKSGIGIVYK-VVLEDGHTLAVRRLGEGGSQ-------RFKEFQTEVEAIGKIRHSNIV 462
+GK G G+V+K +++D +A++ L G S+ +F+EFQ EV + + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 463 TLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
L Y + ++ +++P G L L K P+ WSV+++++ IA G+ Y+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 523 EFSPKKYVHGDLKPSNILLGHNME-----PHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+P VH DL+ NI L E V+DFGL+
Sbjct: 140 NQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---------------------- 176
Query: 578 QERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPS--QKWDIYSYGVILLEMITGRT 634
Q+SV + S LG++ + APE++ + S +K D YS+ +IL ++TG
Sbjct: 177 ----QQSVH------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
+ ++ +N ++ + L P + D + + C P+
Sbjct: 227 PFDEYSYGKIKFINMIR---------EEGLRPTIPEDCPPR-----LRNVIELCWSGDPK 272
Query: 695 KRPTMRHISDALDRL 709
KRP +I L L
Sbjct: 273 KRPHFSYIVKELSEL 287
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 99 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ +P +K E ++ A
Sbjct: 151 NRVKIGDFGLTKV--------------LPQDK-----------EFFKVKEPGESPIFWYA 185
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 62/313 (19%)
Query: 399 DLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH 458
+ E+ V GK I + K L+ G+T RR +F +E +G+ H
Sbjct: 41 EFGEVCSGRLKVPGKREICVAIKT-LKAGYTDKQRR----------DFLSEASIMGQFDH 89
Query: 459 SNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
NI+ L ++I +Y+ NGSL L G + + V +++GI G+
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGM 144
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
YL + S VH DL NIL+ N+ VSDFG++R+ + P
Sbjct: 145 KYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLE---------------DDP- 185
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVV 637
E T + + APE++ K + D++SYG+++ E+++ G
Sbjct: 186 ---------EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ S D++ IEE L +D P IA+ ++ + C RP
Sbjct: 237 DM--SNQDVIK----AIEEGYRLPPPMD---CP--------IALHQLMLDCWQKERSDRP 279
Query: 698 TMRHISDALDRLI 710
I + LD+LI
Sbjct: 280 KFGQIVNMLDKLI 292
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +++P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H DL NIL+ +
Sbjct: 102 SLREYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ PQ+++ V ++ A
Sbjct: 154 NRVKIGDFGLTKVL------------------PQDKEXXKVK-------EPGESPIFWYA 188
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 385
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 431
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 432 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 473
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 474 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521
Query: 710 IVSSD 714
S++
Sbjct: 522 FTSTE 526
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGLAR+ + P E T + + +PE+
Sbjct: 187 KVSDFGLARVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++ G +AV+ L E ++R EF EV + ++RH NIV
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
++ +Y+ GSL LH R+ + +AKG+ YLH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE---RRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
VH +LK N+L+ V DFGL+RL + T S++ A P+
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLK-----ASTFLSSKSAAGTPE---------- 204
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ APE L+ ++K D+YS+GVIL E+ T
Sbjct: 205 -------------WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 126
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARL---------IEDNE------------------X 159
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T + + APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 160 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 214
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 215 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 262
Query: 710 IVSSD 714
S++
Sbjct: 263 FTSTE 267
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 302
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 348
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 349 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 390
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 391 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
Query: 710 IVSSD 714
S++
Sbjct: 439 FTSTE 443
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 302
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 348
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 349 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 390
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 391 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
Query: 710 IVSSD 714
S++
Sbjct: 439 FTSTE 443
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + KIRH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 129
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 175
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 176 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 217
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 218 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 265
Query: 710 IVSSD 714
S++
Sbjct: 266 FTSTE 270
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L + ++F+ E+E + ++H NIV + +S + LI +Y+P G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
SL L + + ++ I KG+ YL K+Y+H +L NIL+ +
Sbjct: 100 SLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENE 151
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
+ DFGL ++ +P +K E ++ A
Sbjct: 152 NRVKIGDFGLTKV--------------LPQDK-----------EYYKVKEPGESPIFWYA 186
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL K S D++S+GV+L E+ T
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 70/315 (22%)
Query: 411 LGKSGIGIVYK-VVLEDGHTLAVRRLGEGGSQ-------RFKEFQTEVEAIGKIRHSNIV 462
+GK G G+V+K +++D +A++ L G S+ +F+EFQ EV + + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 463 TLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
L Y + ++ +++P G L L K P+ WSV+++++ IA G+ Y+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 523 EFSPKKYVHGDLKPSNILLGHNME-----PHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+P VH DL+ NI L E V+DFG +
Sbjct: 140 NQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---------------------- 176
Query: 578 QERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPS--QKWDIYSYGVILLEMITGRT 634
Q+SV + S LG++ + APE++ + S +K D YS+ +IL ++TG
Sbjct: 177 ----QQSVH------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
+ ++ +N ++ + L P + D + + C P+
Sbjct: 227 PFDEYSYGKIKFINMIR---------EEGLRPTIPEDCPPR-----LRNVIELCWSGDPK 272
Query: 695 KRPTMRHISDALDRL 709
KRP +I L L
Sbjct: 273 KRPHFSYIVKELSEL 287
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ----LVDMSAQIASGMAYVERMN---YV 133
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEWTA-----RQGAKFPIKWT 179
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 180 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 221
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 222 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 269
Query: 710 IVSSD 714
S++
Sbjct: 270 FTSTE 274
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 302
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 348
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 349 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 390
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 391 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
Query: 710 IVSSD 714
S++
Sbjct: 439 FTSTE 443
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 125
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 171
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 172 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 213
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 214 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 261
Query: 710 IVSSD 714
S++
Sbjct: 262 FTSTE 266
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNE------------------X 169
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T + + APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 127
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 173
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 174 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 215
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 216 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 263
Query: 710 IVSSD 714
S++
Sbjct: 264 FTSTE 268
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 124/303 (40%), Gaps = 57/303 (18%)
Query: 27 ALLSFKQSVHEDPEGSLSNW-NSSDENPCSWNGITCKEQRVVSVSIPKKKLLGF------ 79
ALL K+ + +LS+W ++D +W G+ C + + + L G
Sbjct: 10 ALLQIKKDLGN--PTTLSSWLPTTDCCNRTWLGVLC-DTDTQTYRVNNLDLSGLNLPKPY 66
Query: 80 -LPSALGSLTDLRHVNLRN-NKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKY 137
+PS+L +L L + + N G +P + + L L + + SG++P+ + ++K
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 138 LQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197
L LD S N +G+LP SI L + N +G +P+ +GS + +S N+
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 198 NGSIPSNTGNL----------------SSLQGT--------------------------- 214
G IP NL S L G+
Sbjct: 187 TGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 215 --VDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCG 272
+D +N G++P L L +++++NNL G IPQ G L +A+ N LCG
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Query: 273 PPL 275
PL
Sbjct: 307 SPL 309
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 70/315 (22%)
Query: 411 LGKSGIGIVYK-VVLEDGHTLAVRRLGEGGSQ-------RFKEFQTEVEAIGKIRHSNIV 462
+GK G G+V+K +++D +A++ L G S+ +F+EFQ EV + + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 463 TLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
L Y + ++ +++P G L L K P+ WSV+++++ IA G+ Y+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 523 EFSPKKYVHGDLKPSNILLGHNME-----PHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+P VH DL+ NI L E V+DF L+
Sbjct: 140 NQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---------------------- 176
Query: 578 QERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPS--QKWDIYSYGVILLEMITGRT 634
Q+SV + S LG++ + APE++ + S +K D YS+ +IL ++TG
Sbjct: 177 ----QQSVH------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
+ ++ +N ++ + L P + D + + C P+
Sbjct: 227 PFDEYSYGKIKFINMIR---------EEGLRPTIPEDCPPR-----LRNVIELCWSGDPK 272
Query: 695 KRPTMRHISDALDRL 709
KRP +I L L
Sbjct: 273 KRPHFSYIVKELSEL 287
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G ++R ++F +E +G+ H NI+ L +++ +Y+ NGSL T
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++G+ G+ YL + YVH DL N+L+ N+
Sbjct: 140 FLRTHDGQFTIMQL-----VGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R+ + P + T + + + APE++
Sbjct: 192 VSDFGLSRVLE---------------DDP----------DAAXTTTGGKIPIRWTAPEAI 226
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
S D++S+GV++ E++ G + + D+++ +EE L P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVIS----SVEEGYRLP---APM 277
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712
P A+ ++ + C H +RP I LD LI S
Sbjct: 278 GCPH--------ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 106 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 157
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 158 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 192
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 245
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 246 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 123 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 174
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 175 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 209
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 262
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 263 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ----LVDMSAQIASGMAYVERMN---YV 133
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 179
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 180 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 221
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 222 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKEPEERPTFEYLQAFLEDY 269
Query: 710 IVSSD 714
S++
Sbjct: 270 FTSTE 274
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 52/238 (21%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRL----GEGGSQRFKEFQTEVEAIGKIRHSNIVTLR 465
++G G G VY+ G +AV+ E SQ + + E + ++H NI+ LR
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
L+ ++ G L L GK +P + V IA+G+ YLH+ +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKR-------IPPDILVNWAVQIARGMNYLHDEA 125
Query: 526 PKKYVHGDLKPSNILLGHNMEP--------HVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+H DLK SNIL+ +E ++DFGLAR
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--------------------- 164
Query: 578 QERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634
E T S G+Y + APE ++ S+ D++SYGV+L E++TG
Sbjct: 165 ----------EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++ G +AV+ L E ++R EF EV + ++RH NIV
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
++ +Y+ GSL LH R+ + +AKG+ YLH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE---RRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
VH DLK N+L+ V DFGL+RL + ++ A P+
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLK-----ASXFLXSKXAAGTPE---------- 204
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ APE L+ ++K D+YS+GVIL E+ T
Sbjct: 205 -------------WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L G ++R ++F +E +G+ H NI+ L +++ +Y+ NGSL T
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L G + + V +++G+ G+ YL + YVH DL N+L+ N+
Sbjct: 140 FLRTHDGQFTIMQL-----VGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
VSDFGL+R+ + P + T + + + APE++
Sbjct: 192 VSDFGLSRVLE---------------DDP----------DAAYTTTGGKIPIRWTAPEAI 226
Query: 609 KVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY 667
S D++S+GV++ E++ G + + D+++ +EE L P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVIS----SVEEGYRLP---APM 277
Query: 668 LAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712
P A+ ++ + C H +RP I LD LI S
Sbjct: 278 GCPH--------ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLGRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 133 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 184
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 185 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 219
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 272
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 273 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 303
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGL RL ++ N A RQ ++ T
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRL---------IEDNEYTA-----RQGAKFPIKWT 349
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 350 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 391
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 392 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 439
Query: 710 IVSSD 714
S++
Sbjct: 440 FTSTE 444
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 412 GKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV 471
GK + + K L+ G+T RR +F E +G+ H N+V L
Sbjct: 68 GKRDVAVAIKT-LKVGYTEKQRR----------DFLCEASIMGQFDHPNVVHLEGVVTRG 116
Query: 472 DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVH 531
+++ +++ NG+L L G + + V +++GIA G+ YL + YVH
Sbjct: 117 KPVMIVIEFMENGALDAFLRKHDGQFTVIQL-----VGMLRGIAAGMRYLADMG---YVH 168
Query: 532 GDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTT 591
DL NIL+ N+ VSDFGL+R+ + P E
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSRVIE---------------DDP----------EAVY 203
Query: 592 TNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T + + + APE+++ K + D++SYG+++ E+++
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ G L L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ +Y+ NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + +VH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG+ G V+ +A++ L + G+ + F E + + K+RH +V L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ G L L G+ G P V + IA G+ Y+ + YV
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ----LVDMAAQIASGMAYVERMN---YV 136
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G N+ V+DFGLARL ++ N A RQ ++ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL---------IEDNEYTA-----RQGAKFPIKWT 182
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E+ T GR + + E+
Sbjct: 183 -------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----- 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P + E ++ + C PE+RPT ++ L+
Sbjct: 225 ----------LDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
Query: 710 IVSSD 714
S++
Sbjct: 273 FTSTE 277
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 54/304 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + ++ + ++F+ F+ EV + K RH NI+ Y +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-T 102
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
D ++ + SL LH V T + I + A+G+ YLH K +
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLH-----VQETKFQMFQLIDIARQTAQGMDYLH---AKNII 154
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H D+K +NI L + + DFGLA + + GS Q+ +Q + S+
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-------------QQVEQPTGSV--- 198
Query: 591 TTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ APE +++ S + D+YSYG++L E++TG + + D +
Sbjct: 199 ----------LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQI 246
Query: 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISDA 705
+M V Y +PD K + A+ ++ CV E+RP I +
Sbjct: 247 IFM------------VGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294
Query: 706 LDRL 709
++ L
Sbjct: 295 IELL 298
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 57/296 (19%)
Query: 425 EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+D +AV+ L + K+FQ E E + ++H +IV D +++++Y+ +G
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 485 SLATAL--HGKPGMVSFTPVPWSVR--------VKIIKGIAKGLVYLHEFSPKKYVHGDL 534
L L HG M+ P + + I IA G+VYL + + +VH DL
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDL 159
Query: 535 KPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNS 594
N L+G N+ + DFG++R S +
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSR--------------------------DVYSTDYYRVGG 193
Query: 595 SSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLC 653
+ L + PES+ K + + D++S+GVIL E+ T G+ Q+ ++E+ C
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI------EC 247
Query: 654 IEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
I + + L P + P KE V + + C P++R ++ I L L
Sbjct: 248 ITQGRVLE---RPRVCP---KE-----VYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G V+ +AV+ + + GS + F E + ++H +V L A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ +I +++ GSL L G S P+P + IA+G+ ++ + + Y+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLP--KLIDFSAQIAEGMAFIEQ---RNYI 306
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+ ++ ++DFGLAR+ ++ N
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARV---------IEDNEY------------------ 339
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T + + APE++ + K D++S+G++L+E++T GR + G S +++
Sbjct: 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR--IPYPGMSNPEVIRA 397
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
++ +P + EE+ ++ M C + PE+RPT +I LD
Sbjct: 398 LERGYRMPRP------------ENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLDDF 442
Query: 710 IVSSD 714
+++
Sbjct: 443 YTATE 447
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 54/298 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G V+ +AV+ + + GS + F E + ++H +V L A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ +I +++ GSL L G S P+P + IA+G+ ++ + + Y+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLP--KLIDFSAQIAEGMAFIEQ---RNYI 133
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+ ++ ++DFGLAR+ ++ N
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARV---------IEDNEY------------------ 166
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T + + APE++ + K D++S+G++L+E++T GR + G S +++
Sbjct: 167 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR--IPYPGMSNPEVIRA 224
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707
++ +P + EE+ ++ M C + PE+RPT +I LD
Sbjct: 225 LERGYRMPRP------------ENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLD 267
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ + + NGSL
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 106 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 157
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 158 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 192
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 245
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 246 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ + + NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + YVH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 44 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 101
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 102 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 148
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 149 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 181
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 232
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 233 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 281
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 43 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 100
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 101 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 147
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 148 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 180
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 181 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 231
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 232 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 280
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 41 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 98
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 99 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 145
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 146 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 178
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 229
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 230 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 278
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 140/345 (40%), Gaps = 66/345 (19%)
Query: 378 ETLSENVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTL-AVRRLG 436
+T ++++++++V L L AF GK + Y + E L AV+ L
Sbjct: 4 DTFVQHIKRHNIV---------LKRELGEGAF--GKVFLAECYNLCPEQDKILVAVKTLK 52
Query: 437 EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKP 494
+ K+F E E + ++H +IV D +++++Y+ +G L L HG
Sbjct: 53 DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPD 112
Query: 495 GMVSF-----TPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549
++ T + S + I + IA G+VYL + + +VH DL N L+G N+ +
Sbjct: 113 AVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 169
Query: 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK 609
DFG++R S + + L + PES+
Sbjct: 170 GDFGMSR--------------------------DVYSTDYYRVGGHTMLPIRWMPPESIM 203
Query: 610 VVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYL 668
K + + D++S GV+L E+ T G+ Q+ ++E+ CI + + L P
Sbjct: 204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI------ECITQGRVLQ---RPRT 254
Query: 669 APDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
P V ++ + C P R ++ I L L +S
Sbjct: 255 CPQ--------EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 35 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 92
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 93 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 139
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 140 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 172
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 223
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 224 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 35 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 92
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 93 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 139
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL A T +
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDAE---------------------------XTAREGAKF 172
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 223
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 224 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 45 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 102
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 103 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 149
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 150 ILVSDTLSCKIADFGLARL---------IEDNEY------------------TAREGAKF 182
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 183 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 233
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 234 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 282
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 67/297 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 40 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 97
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 98 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 144
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 145 ILVSDTLSCKIADFGLARL---------IEDNEY------------------TAREGAKF 177
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 228
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714
+ ++ P P EE+ ++++ C PE RPT ++ L+ +++
Sbjct: 229 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATE 277
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 36 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 93
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 94 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 140
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 141 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 173
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 224
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
+ ++ P P EE+ ++++ C PE RPT ++ L+ ++
Sbjct: 225 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 35 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 92
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 93 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 139
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 140 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 172
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 223
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
+ ++ P P EE+ ++++ C PE RPT ++ L+ ++
Sbjct: 224 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 37 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 94
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 95 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 141
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 142 ILVSDTLSCKIADFGLARL---------IEDNE------------------XTAREGAKF 174
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 225
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
+ ++ P P EE+ ++++ C PE RPT ++ L+ ++
Sbjct: 226 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 41 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 98
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 99 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 145
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 146 ILVSDTLSCKIADFGLARL---------IEDNEY------------------TAREGAKF 178
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 229
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
+ ++ P P EE+ ++++ C PE RPT ++ L+ ++
Sbjct: 230 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 35 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 92
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 93 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 139
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 140 ILVSDTLSCKIADFGLARL---------IEDNEY------------------TAREGAKF 172
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 223
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
+ ++ P P EE+ ++++ C PE RPT ++ L+ ++
Sbjct: 224 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 54/305 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G V+ +A++ L + G+ + F E + + K++H +V L A S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-S 74
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ +Y+ GSL L G P V + +A G+ Y+ + Y+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPN----LVDMAAQVAAGMAYIERMN---YI 127
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+G+ + ++DFGLARL ++ N A RQ ++ T
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARL---------IEDNEXTA-----RQGAKFPIKWT 173
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
APE+ + + K D++S+G++L E++T GR + + E+
Sbjct: 174 -------------APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV----- 215
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
L V Y P ++ I++ ++ + C PE+RPT ++ L+
Sbjct: 216 ----------LEQVERGYRMPCP--QDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDY 263
Query: 710 IVSSD 714
+++
Sbjct: 264 FTATE 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 67/295 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 30 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 87
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H DL+ +N
Sbjct: 88 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAAN 134
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 135 ILVSDTLSCKIADFGLARL---------IEDNEY------------------TAREGAKF 167
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 218
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712
+ ++ P P EE+ ++++ C PE RPT ++ L+ +
Sbjct: 219 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 52/284 (18%)
Query: 429 TLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487
++A++ L G +++ ++F E +G+ H NI+ L +++ + + NGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ L + + V +++GIA G+ YL + VH DL NIL+ N+
Sbjct: 135 SFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVC 186
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
VSDFGL+R+ + P E T + + +PE+
Sbjct: 187 KVSDFGLSRVLE---------------DDP----------EAAYTTRGGKIPIRWTSPEA 221
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
+ K + D++SYG++L E+++ G ++ S D++ ++E L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIK----AVDEGYRLPPPMD- 274
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710
P A+ ++ + C RP I LD+LI
Sbjct: 275 --CP--------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 64/305 (20%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G V+ +AV+ + + GS + F E + ++H +V L A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ +I +++ GSL L G S P+P + IA+G+ ++ + + Y+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLP--KLIDFSAQIAEGMAFIEQ---RNYI 300
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +NIL+ ++ ++DFGLAR+ + P +
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVG-----------AKFPIK--------------- 334
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
+ APE++ + K D++S+G++L+E++T GR + G S +++
Sbjct: 335 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR--IPYPGMSNPEVIRA 381
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
++ +P + EE+ ++ M C + PE+RPT +I LD
Sbjct: 382 LERGYRMPRP------------ENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLDDF 426
Query: 710 IVSSD 714
+++
Sbjct: 427 YTATE 431
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 426 DGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
+GHT +AV+ L +G S F E + +++H +V L A + + +I +Y+ NG
Sbjct: 31 NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENG 88
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIK------GIAKGLVYLHEFSPKKYVHGDLKPSN 538
SL V F P +++ I K IA+G+ ++ E + Y+H +L+ +N
Sbjct: 89 SL----------VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNLRAAN 135
Query: 539 ILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
IL+ + ++DFGLARL ++ N T +
Sbjct: 136 ILVSDTLSCKIADFGLARL---------IEDNEY------------------TAREGAKF 168
Query: 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657
+ APE++ + K D++S+G++L E++T GR + + E+ I+
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---------IQNL 219
Query: 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713
+ ++ P P EE+ ++++ C PE RPT ++ L+ ++
Sbjct: 220 ERGYRMVRPDNCP-----EELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 116
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 172
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 212
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 213 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ +G + + +E Q + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 94
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 150
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 190
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 191 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 101
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 157
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 158 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 197
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 198 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 90
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 146
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 147 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 186
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 187 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 83
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 139
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 140 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 179
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 180 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 94
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 150
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 190
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 191 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ +G + + +E Q + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 110
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 166
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 167 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 206
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 207 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ +G + + +E Q + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 116
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 172
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 212
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 213 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 120
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 176
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 177 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 216
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 217 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 86
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 142
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 143 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 182
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 183 ------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 118
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 174
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 175 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 214
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 215 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 95
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 151
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 152 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 191
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 192 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 82
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 138
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 178
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 179 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 87
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 143
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 144 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 183
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 184 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
V+G G+VY+ L D G +A++++ + +RFK E++ + K+ H NIV LR ++
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFK--NRELQIMRKLDHCNIVRLRYFF 161
Query: 469 WSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYL 521
+S EK L+ DY+P A H + PV + VK+ + + + L Y+
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PV---IYVKLYMYQLFRSLAYI 217
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
H F H D+KP N+LL + + DFG A+ + G P
Sbjct: 218 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEP--------------- 257
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGR 633
N S YY+APE + + D++S G +L E++ G+
Sbjct: 258 ------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 77/323 (23%)
Query: 410 VLGKSGIGIVYKV-VLEDGHTL--AVRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTL 464
V+G+ G V K + +DG + A++R+ E S+ ++F E+E + K+ H NI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 465 ------RAYYWSVDEKLLIYDYIPNGSL------ATALHGKPGMVSFTPVPWSVR----V 508
R Y + L +Y P+G+L + L P ++ +
Sbjct: 82 LGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+A+G+ YL S K+++H DL NIL+G N ++DFGL+R
Sbjct: 136 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------------ 180
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
EV + L + A ESL + D++SYGV+L E
Sbjct: 181 -----------------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+++ G T + +E+ EK P L+ L D + V +
Sbjct: 224 IVSLGGTPYCGMTCAEL----------YEKLPQGYRLEKPLNCDDE-------VYDLMRQ 266
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C P +RP+ I +L+R++
Sbjct: 267 CWREKPYERPSFAQILVSLNRML 289
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 77/323 (23%)
Query: 410 VLGKSGIGIVYKV-VLEDGHTL--AVRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTL 464
V+G+ G V K + +DG + A++R+ E S+ ++F E+E + K+ H NI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 465 ------RAYYWSVDEKLLIYDYIPNGSL------ATALHGKPGMV----SFTPVPWSVRV 508
R Y + L +Y P+G+L + L P + + + +
Sbjct: 92 LGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+A+G+ YL S K+++H DL NIL+G N ++DFGL+R
Sbjct: 146 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------------ 190
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
EV + L + A ESL + D++SYGV+L E
Sbjct: 191 -----------------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+++ G T + +E+ EK P L+ L D + V +
Sbjct: 234 IVSLGGTPYCGMTCAEL----------YEKLPQGYRLEKPLNCDDE-------VYDLMRQ 276
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C P +RP+ I +L+R++
Sbjct: 277 CWREKPYERPSFAQILVSLNRML 299
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 126/312 (40%), Gaps = 67/312 (21%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G V+ + +AV+ L + G+ + F E + ++H +V L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ +I +Y+ GSL L G P + IA+G+ Y+ K Y+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK----LIDFSAQIAEGMAYIER---KNYI 132
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +N+L+ ++ ++DFGLAR+ ++ N
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARV---------IEDNEY------------------ 165
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-------GRT-AVVQVGSS 642
T + + APE++ + K D++S+G++L E++T GRT A V S
Sbjct: 166 TAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALS 225
Query: 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+ + ++ C PD E+ ++K+ C E+RPT ++
Sbjct: 226 QGYRMPRVENC----------------PD-----ELYDIMKM---CWKEKAEERPTFDYL 261
Query: 703 SDALDRLIVSSD 714
LD +++
Sbjct: 262 QSVLDDFYTATE 273
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 67/315 (21%)
Query: 415 GIGIVYKVVLEDGHTL---------AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLR 465
G G KV L + H L AV+ L E ++FQ E E + ++H +IV
Sbjct: 50 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 109
Query: 466 AYYWSVDEKLLIYDYIPNGSLATAL--HGKPGM-------VSFTPVPWSVRVKIIKGIAK 516
L++++Y+ +G L L HG V+ P+ + + +A
Sbjct: 110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 169
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+VYL + +VH DL N L+G + + DFG++R
Sbjct: 170 GMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-------------------- 206
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635
S + + L + PES+ K + + D++S+GV+L E+ T G+
Sbjct: 207 ------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
Query: 636 VVQVGSSE-MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
Q+ ++E +D CI + + L P P E+ A+++ C P+
Sbjct: 261 WYQLSNTEAID-------CITQGRELE---RPRACP-----PEVYAIMR---GCWQREPQ 302
Query: 695 KRPTMRHISDALDRL 709
+R +++ + L L
Sbjct: 303 QRHSIKDVHARLQAL 317
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 77/323 (23%)
Query: 410 VLGKSGIGIVYKV-VLEDGHTL--AVRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTL 464
V+G+ G V K + +DG + A++R+ E S+ ++F E+E + K+ H NI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 465 ------RAYYWSVDEKLLIYDYIPNGSL------ATALHGKPGMVSFTPVPWSVR----V 508
R Y + L +Y P+G+L + L P ++ +
Sbjct: 89 LGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+A+G+ YL S K+++H +L NIL+G N ++DFGL+R
Sbjct: 143 HFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR------------ 187
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
EV + L + A ESL + D++SYGV+L E
Sbjct: 188 -----------------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+++ G T + +E+ EK P L+ L D + V +
Sbjct: 231 IVSLGGTPYCGMTCAEL----------YEKLPQGYRLEKPLNCDDE-------VYDLMRQ 273
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C P +RP+ I +L+R++
Sbjct: 274 CWREKPYERPSFAQILVSLNRML 296
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 54/307 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ + SL LH + T + I + A+G+ YLH K +
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI--- 170
Query: 591 TTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ APE +++ S + D+Y++G++L E++TG+ + + D +
Sbjct: 171 ----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQI 218
Query: 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISDA 705
+M V YL+PD K A+ ++ C+ ++RP I +
Sbjct: 219 IFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
Query: 706 LDRLIVS 712
++ L S
Sbjct: 267 IELLARS 273
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLR--AYYWSVDEKLLIYDYIPNG 484
G +AV++L G + ++FQ E++ + + IV R +Y E L+ +Y+P+G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
L L + + + + I KG+ YL ++ VH DL NIL+
Sbjct: 96 CLRDFLQRHRARLDASRL-----LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 147
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLA+L + + R P + P ++ A
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVV---REPGQSP----------------------IFWYA 182
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL S++ D++S+GV+L E+ T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + + +AV+ + EG S EF E + + K+ H +V +Y
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLV---KFYGV 71
Query: 471 VDEKLLIY---DYIPNGSLATAL--HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
++ IY +YI NG L L HGK P S +++ + +G+ +L
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGK----GLEP---SQLLEMCYDVCEGMAFL---E 121
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
+++H DL N L+ ++ VSDFG+ R V
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY---------------------------V 154
Query: 586 SLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
+ ++ + + APE K S K D++++G+++ E V +G D
Sbjct: 155 LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE-------VFSLGKMPYD 207
Query: 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705
L ++ ++ + + P+LA D + +I +C H PEKRPT + + +
Sbjct: 208 LYTNSEVVLKVSQG-HRLYRPHLASD--------TIYQIMYSCWHELPEKRPTFQQLLSS 258
Query: 706 LDRL 709
++ L
Sbjct: 259 IEPL 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 78
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 175
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 176 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 222
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 223 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 271 SIELLARS 278
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 67/315 (21%)
Query: 415 GIGIVYKVVLEDGHTL---------AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLR 465
G G KV L + H L AV+ L E ++FQ E E + ++H +IV
Sbjct: 27 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 86
Query: 466 AYYWSVDEKLLIYDYIPNGSLATAL--HGKPGM-------VSFTPVPWSVRVKIIKGIAK 516
L++++Y+ +G L L HG V+ P+ + + +A
Sbjct: 87 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 146
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+VYL + +VH DL N L+G + + DFG++R
Sbjct: 147 GMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-------------------- 183
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635
S + + L + PES+ K + + D++S+GV+L E+ T G+
Sbjct: 184 ------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
Query: 636 VVQVGSSE-MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
Q+ ++E +D CI + + L P P E+ A+++ C P+
Sbjct: 238 WYQLSNTEAID-------CITQGRELE---RPRACP-----PEVYAIMR---GCWQREPQ 279
Query: 695 KRPTMRHISDALDRL 709
+R +++ + L L
Sbjct: 280 QRHSIKDVHARLQAL 294
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 67/315 (21%)
Query: 415 GIGIVYKVVLEDGHTL---------AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLR 465
G G KV L + H L AV+ L E ++FQ E E + ++H +IV
Sbjct: 21 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 80
Query: 466 AYYWSVDEKLLIYDYIPNGSLATAL--HGKPGM-------VSFTPVPWSVRVKIIKGIAK 516
L++++Y+ +G L L HG V+ P+ + + +A
Sbjct: 81 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 140
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+VYL + +VH DL N L+G + + DFG++R
Sbjct: 141 GMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-------------------- 177
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635
S + + L + PES+ K + + D++S+GV+L E+ T G+
Sbjct: 178 ------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
Query: 636 VVQVGSSE-MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
Q+ ++E +D CI + + L P P E+ A+++ C P+
Sbjct: 232 WYQLSNTEAID-------CITQGRELE---RPRACP-----PEVYAIMR---GCWQREPQ 273
Query: 695 KRPTMRHISDALDRL 709
+R +++ + L L
Sbjct: 274 QRHSIKDVHARLQAL 288
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 67/312 (21%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G V+ + +AV+ L + G+ + F E + ++H +V L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ +I +++ GSL L G P + IA+G+ Y+ K Y+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPK----LIDFSAQIAEGMAYIER---KNYI 131
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL+ +N+L+ ++ ++DFGLAR+ ++ N
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARV---------IEDNEY------------------ 164
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-------GRT-AVVQVGSS 642
T + + APE++ + K +++S+G++L E++T GRT A V S
Sbjct: 165 TAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALS 224
Query: 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+ + M+ C PD E+ ++K+ C E+RPT ++
Sbjct: 225 QGYRMPRMENC----------------PD-----ELYDIMKM---CWKEKAEERPTFDYL 260
Query: 703 SDALDRLIVSSD 714
LD +++
Sbjct: 261 QSVLDDFYTATE 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 73
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 171 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 217
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 218 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 266 SIELLARS 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 78
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 175
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 176 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 222
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 223 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 271 SIELLARS 278
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 75
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 127
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 172
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 173 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 219
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 220 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 267
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 268 SIELLARS 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 77
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH S T + I + A+G+ YLH K
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLH---AKSI 129
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L + + DFGLA + + GS + +Q S S+
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 174
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGR 633
+ APE +++ S + D+Y++G++L E++TG+
Sbjct: 175 -----------LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 148/348 (42%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+TL +I +Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 101
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 198
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 199 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 245
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 246 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 293
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 294 SIELLARS 301
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 100
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 152
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + + GS + +Q S S+
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------HQFEQLSGSI-- 197
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 198 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 244
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 245 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 292
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 293 SIELLARS 300
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I +Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDXXKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGI-DKDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I +Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDXXKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 38/226 (16%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 90
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ ++ + SL LH S T + I + A+G+ YLH K +
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DLK +NI L + + DFGLA + GS + +Q S S+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------HQFEQLSGSI--- 186
Query: 591 TTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGR 633
+ APE +++ S + D+Y++G++L E++TG+
Sbjct: 187 ----------LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 73
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + GS + +Q S S+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS-------------HQFEQLSGSI-- 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 171 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 217
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 218 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 266 SIELLARS 273
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I +Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDYYKNTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 40/227 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 89
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH S T + I + A+G+ YLH K
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L + + DFGLA + GS + +Q S S+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------HQFEQLSGSI-- 186
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGR 633
+ APE +++ S + D+Y++G++L E++TG+
Sbjct: 187 -----------LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 93
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 145
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + GS + +Q S S+
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS-------------HQFEQLSGSI-- 190
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 191 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 237
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 238 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 285
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 286 SIELLARS 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 56/308 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G VYK + + + Q+ + F+ EV + K RH NI+ Y S
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 101
Query: 471 VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+L ++ + SL LH + T + I + A+G+ YLH K
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLH-----IIETKFEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK +NI L ++ + DFGLA + GS + +Q S S+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS-------------HQFEQLSGSI-- 198
Query: 590 TTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646
+ APE +++ S + D+Y++G++L E++TG+ + + D
Sbjct: 199 -----------LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQ 245
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEII--AVLKIAMACVHSSPEKRPTMRHISD 704
+ +M V YL+PD K A+ ++ C+ ++RP I
Sbjct: 246 IIFM------------VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 293
Query: 705 ALDRLIVS 712
+++ L S
Sbjct: 294 SIELLARS 301
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I +Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMRIADFGLARDINNIDYYKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 102/248 (41%), Gaps = 45/248 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG+ G V V L DGH A++R+ Q +E Q E + H NI+ L AY
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 470 ----SVDEKLLIYDYIPNGSLATA---LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
+ E L+ + G+L L K ++ + W ++ GI +GL +H
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEAIH 151
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA--NIAGGSPTLQSNRMPAEKPQER 580
K Y H DLKP+NILLG +P + D G A ++ G L A
Sbjct: 152 ---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA------ 202
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGR---T 634
Q+ ++S Y+APE V ++ D++S G +L M+ G
Sbjct: 203 QRCTIS---------------YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
Query: 635 AVVQVGSS 642
V Q G S
Sbjct: 248 MVFQKGDS 255
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L G + ++FQ E++ + + IV R + + L+ +Y+P+G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
L L + + + + I KG+ YL ++ VH DL NIL+
Sbjct: 112 CLRDFLQRHRARLDASRL-----LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 163
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLA+L + + R P + P ++ A
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVV---REPGQSP----------------------IFWYA 198
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL S++ D++S+GV+L E+ T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L G + ++FQ E++ + + IV R + + L+ +Y+P+G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
L L + + + + I KG+ YL ++ VH DL NIL+
Sbjct: 99 CLRDFLQRHRARLDASRL-----LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 150
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLA+L + + R P + P ++ A
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVV---REPGQSP----------------------IFWYA 185
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL S++ D++S+GV+L E+ T
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 35/207 (16%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPNG 484
G +AV++L G + ++FQ E++ + + IV R + + L+ +Y+P+G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
L L + + + + I KG+ YL ++ VH DL NIL+
Sbjct: 100 CLRDFLQRHRARLDASRL-----LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 151
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLA+L + + R P + P ++ A
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVV---REPGQSP----------------------IFWYA 186
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT 631
PESL S++ D++S+GV+L E+ T
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEG-----GSQR-FKEFQTEVEAIGKIRHSNIVT 463
LGK GIV+K + G +AV+++ + +QR F+E E G H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---HENIVN 73
Query: 464 LRAYYWSVDEK--LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
L + +++ L++DY + T LH PV + ++ + K + YL
Sbjct: 74 LLNVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVH---KQYVVYQLIKVIKYL 125
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR-LANIAGGSPTLQSNRMPAEKPQER 580
H +H D+KPSNILL V+DFGL+R NI +N +P +
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV-----TNNIPLSINENT 177
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPES-LKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639
+ + T ++ +Y+APE L K ++ D++S G IL E++ G+ +
Sbjct: 178 ENFDDDQPILTDYVAT---RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP--IFP 232
Query: 640 GSSEMD 645
GSS M+
Sbjct: 233 GSSTMN 238
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 42/238 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G+ G+VYK G T A++ RL + E+ + +++HSNIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ +L+++++ + G+ S T S ++++ GIA Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK--SFLLQLLNGIA----YCHD---RR 120
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H DLKP N+L+ E ++DFGLAR A G P + + E
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR----AFGIPV----------------RKYTHE 160
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
V T +Y+AP+ L K S DI+S G I EM+ G A + G SE D
Sbjct: 161 VVTL--------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG--APLFPGVSEAD 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 54/303 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G+V+ + +A++ + EG ++F E E + K+ H +V L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
L+++++ +G L+ L + G+ + + + + + +G+ YL E S +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAS---VI 125
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+G N VSDFG+ R V +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF---------------------------VLDDQY 158
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T+++ + + +PE + S K D++S+GV++ E+ + G+ +SE+
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----- 213
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
+E+ + P LA V +I C PE RP + L +
Sbjct: 214 ----VEDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
Query: 710 IVS 712
S
Sbjct: 262 AAS 264
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 78/353 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVL-----------EDGHTLA 431
V +Y+L P D + F D+L LGK G G +VV+ ++ T+A
Sbjct: 6 VSEYEL-PEDPKWEFPRDKL------TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 58
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L + +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 59 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 118
Query: 490 LHGK--PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PGM V + + V +A+G+ YL + +K +H DL N+
Sbjct: 119 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNV 175
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ N ++DFGLAR N + R+P +
Sbjct: 176 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------------------------ 211
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV++ E+ T G + + E L ++ K
Sbjct: 212 --WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDK 267
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
P A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 268 P------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 78/353 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVL-----------EDGHTLA 431
V +Y+L P D + F D+L LGK G G +VV+ ++ T+A
Sbjct: 8 VSEYEL-PEDPKWEFPRDKL------TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 60
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L + +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 61 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 120
Query: 490 LHGK--PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PGM V + + V +A+G+ YL + +K +H DL N+
Sbjct: 121 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNV 177
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ N ++DFGLAR N + R+P +
Sbjct: 178 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------------------------ 213
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV++ E+ T G + + E L ++ K
Sbjct: 214 --WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDK 269
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
P A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 270 P------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G+ G+VYK G T A++ RL + E+ + +++HSNIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ +L+++++ + G+ S T S ++++ GIA Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK--SFLLQLLNGIA----YCHD---RR 120
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H DLKP N+L+ E ++DFGLAR A G P + + E
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR----AFGIPV----------------RKYTHE 160
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITG 632
V T +Y+AP+ L K S DI+S G I EM+ G
Sbjct: 161 VVTL--------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 78/353 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVL-----------EDGHTLA 431
V +Y+L P D + F D+L LGK G G +VV+ ++ T+A
Sbjct: 11 VSEYEL-PEDPKWEFPRDKL------TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 63
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L + +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 64 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 123
Query: 490 LHGK--PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PGM V + + V +A+G+ YL + +K +H DL N+
Sbjct: 124 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNV 180
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ N ++DFGLAR N + R+P +
Sbjct: 181 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------------------------ 216
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV++ E+ T G + + E L ++ K
Sbjct: 217 --WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDK 272
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
P A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 273 P------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I +Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 38/194 (19%)
Query: 441 QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFT 500
+ K F+ EV ++ H NIV++ D L+ +YI +L+ + S
Sbjct: 53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE------SHG 106
Query: 501 PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560
P+ + I G+ + H+ + VH D+KP NIL+ N + DFG+A+ +
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS- 162
Query: 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDI 619
E + T ++ LG+ Y +PE K + DI
Sbjct: 163 ---------------------------ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDI 195
Query: 620 YSYGVILLEMITGR 633
YS G++L EM+ G
Sbjct: 196 YSIGIVLYEMLVGE 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ ++ + +E+E + I +H NI+ L +I +Y G+L L +
Sbjct: 77 DDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 54/293 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G+V+ + +A++ + EG ++F E E + K+ H +V L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
L+++++ +G L+ L + G+ + + + + + +G+ YL E +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 128
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+G N VSDFG+ R V +
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRF---------------------------VLDDQY 161
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T+++ + + +PE + S K D++S+GV++ E+ + G+ +SE+
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----- 216
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+E+ + P LA V +I C PE RP +
Sbjct: 217 ----VEDISTGFRLYKPRLAS--------THVYQIMNHCWRERPEDRPAFSRL 257
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 410 VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVT 463
VLG G VYK + + +G T+ A++ L E G + EF E + + H ++V
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
L S +L + +P+G L +H K + S + W V+ IAKG++YL
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 134
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQ 582
E ++ VH DL N+L+ ++DFGLARL +MP +
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------- 184
Query: 583 KSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ A E + K + + D++SYGV + E++T
Sbjct: 185 -------------------WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 58/307 (18%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRF--KEFQTEVEAIGKIRHSNIVTLRA 466
++G+ G+V K +D G +A+++ E + K E++ + ++RH N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
L+++++ + ++ L P + + V + +II GI G + H
Sbjct: 92 VCKKKKRWYLVFEFV-DHTILDDLELFPNGLDYQVVQKYL-FQIINGI--GFCHSHNI-- 145
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+H D+KP NIL+ + + DFG AR TL + P E +
Sbjct: 146 ---IHRDIKPENILVSQSGVVKLCDFGFAR---------TLAA---PGEVYDD------- 183
Query: 587 LEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L VK + D+++ G ++ EM G G S++D
Sbjct: 184 -EVAT--------RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP--GDSDID 232
Query: 646 LVNWMQLCIEEKKPLADVL---DPYLA----PDADKEEEII--------AVLKIAMACVH 690
+ + +C+ P L +P A P+ + E + V+ +A C+H
Sbjct: 233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLH 292
Query: 691 SSPEKRP 697
P+KRP
Sbjct: 293 IDPDKRP 299
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 68/348 (19%)
Query: 384 VEQYDLVPLDTQVAFDLDEL-----LKASAF--VLGKSGIGIVYKVVLEDGHTLAVRRLG 436
V +Y+L P D + F D+L L AF V+ +GI K ++ T+AV+ L
Sbjct: 19 VSEYEL-PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVAVKMLK 76
Query: 437 EGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK- 493
+ +++ + +E+E + I +H NI+ L +I Y G+L L +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARR 136
Query: 494 -PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
PGM V + + V +A+G+ YL + +K +H DL N+L+ N
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN 193
Query: 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQA 604
++DFGLAR N + R+P + + A
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVK--------------------------WMA 227
Query: 605 PESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663
PE+L + + D++S+GV++ E+ T G + + E L ++ KP
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDKP---- 281
Query: 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 282 --------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G+ G+VYK G T A++ RL + E+ + +++HSNIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ +L+++++ + G+ S T S ++++ GIA Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK--SFLLQLLNGIA----YCHD---RR 120
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H DLKP N+L+ E ++DFGLAR A G P + + E
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR----AFGIPV----------------RKYTHE 160
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITG 632
+ T +Y+AP+ L K S DI+S G I EM+ G
Sbjct: 161 IVTL--------WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 78/353 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVL-----------EDGHTLA 431
V +Y+L P D + F D+L LGK G G +VV+ ++ T+A
Sbjct: 65 VSEYEL-PEDPKWEFPRDKL------TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 117
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L + +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 118 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 177
Query: 490 LHGK--PGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PGM V + + V +A+G+ YL + +K +H DL N+
Sbjct: 178 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNV 234
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ N ++DFGLAR N + R+P +
Sbjct: 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK------------------------ 270
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV++ E+ T G + + E L ++ K
Sbjct: 271 --WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLLKEGHRMDK 326
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
P A+ E+ +++ C H+ P +RPT + + + LDR++
Sbjct: 327 P------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 47/237 (19%)
Query: 402 ELLKASAFVLGKSGIGIVY---KVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEA--IGK 455
ELLK VLG+ G V+ KV D GH A++ L + + +T++E +
Sbjct: 31 ELLK----VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD 86
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H +V L + + + LI D++ G L T L K M + V + + +A
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKF-----YLAELA 140
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
GL +LH ++ DLKP NILL ++DFGL++ A
Sbjct: 141 LGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAI---------------- 181
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+ ++K+ S T Y APE + S D +SYGV++ EM+TG
Sbjct: 182 ---DHEKKAYSFCGTVE---------YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 54/293 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G+V+ + +A++ + EG ++F E E + K+ H +V L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
L+++++ +G L+ L + G+ + + + + + +G+ YL E +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 123
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+G N VSDFG+ R V +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRF---------------------------VLDDQY 156
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T+++ + + +PE + S K D++S+GV++ E+ + G+ +SE+
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----- 211
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+E+ + P LA V +I C PE RP +
Sbjct: 212 ----VEDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRL 252
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 54/293 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G+V+ + +A++ + EG ++F E E + K+ H +V L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
L+++++ +G L+ L + G+ + + + + + +G+ YL E +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 125
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+G N VSDFG+ R V +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF---------------------------VLDDQY 158
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T+++ + + +PE + S K D++S+GV++ E+ + G+ +SE+
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----- 213
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+E+ + P LA V +I C PE RP +
Sbjct: 214 ----VEDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRL 254
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 410 VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVT 463
VLG G VYK + + +G T+ A++ L E G + EF E + + H ++V
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
L S +L + +P+G L +H K + S + W V+ IAKG++YL
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQ 582
E ++ VH DL N+L+ ++DFGLARL +MP +
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------- 207
Query: 583 KSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ A E + K + + D++SYGV + E++T
Sbjct: 208 -------------------WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 163
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T ++ + + APESL K S K D++++GV+L E+ T
Sbjct: 164 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 427 GHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPN 483
G +AV+ L EG G Q +Q E+E + + H +IV + EK L+ +Y+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543
GSL L P V + + + I +G+ YLH + Y+H L N+LL +
Sbjct: 98 GSLRDYL---PRHC----VGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 147
Query: 544 NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQ 603
+ + DFGLA+ P+ E + ++
Sbjct: 148 DRLVKIGDFGLAKAV------------------PE-------GHEYYRVREDGDSPVFWY 182
Query: 604 APESLKVVKPSQKWDIYSYGVILLEMIT 631
APE LK K D++S+GV L E++T
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 427 GHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPN 483
G +AV+ L EG G Q +Q E+E + + H +IV + EK L+ +Y+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543
GSL L P V + + + I +G+ YLH + Y+H L N+LL +
Sbjct: 97 GSLRDYL---PRHC----VGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 146
Query: 544 NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQ 603
+ + DFGLA+ P+ E + ++
Sbjct: 147 DRLVKIGDFGLAKAV------------------PE-------GHEYYRVREDGDSPVFWY 181
Query: 604 APESLKVVKPSQKWDIYSYGVILLEMIT 631
APE LK K D++S+GV L E++T
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 163
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T ++ + + APESL K S K D++++GV+L E+ T
Sbjct: 164 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 54/293 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G+V+ + +A++ + EG S +F E E + K+ H +V L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
L+++++ +G L+ L + G+ + + + + + +G+ YL E +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 145
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+G N VSDFG+ R V +
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRF---------------------------VLDDQY 178
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T+++ + + +PE + S K D++S+GV++ E+ + G+ +SE+
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----- 233
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+E+ + P LA V +I C PE RP +
Sbjct: 234 ----VEDISTGFRLYKPRLAS--------THVYQIMNHCWKERPEDRPAFSRL 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 171 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 223
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 224 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 271
Query: 707 DRLIVSS 713
+ + S
Sbjct: 272 ETMFQES 278
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 133
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 166
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 167 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 219
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 220 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 267
Query: 707 DRLIVSS 713
+ + S
Sbjct: 268 ETMFQES 274
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 187
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 216
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + + E++L+
Sbjct: 217 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 276
Query: 648 NWMQL 652
Q+
Sbjct: 277 FGCQV 281
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 223
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 224 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 271
Query: 707 DRLIVSS 713
+ + S
Sbjct: 272 ETMFQES 278
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 165
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 218
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 219 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 707 DRLIVSS 713
+ + S
Sbjct: 267 ETMFQES 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 165
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 218
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 219 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 707 DRLIVSS 713
+ + S
Sbjct: 267 ETMFQES 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 165
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 218
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 219 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 707 DRLIVSS 713
+ + S
Sbjct: 267 ETMFQES 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 136
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 169
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 222
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 223 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 270
Query: 707 DRLIVSS 713
+ + S
Sbjct: 271 ETMFQES 277
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 412 GKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV 471
G+ +G+ K L T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 46 GEVYVGVWKKYSL----TVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLE 100
Query: 472 DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVH 531
++ +Y+P G+L L + V V + + I+ + YL + K ++H
Sbjct: 101 PPFYIVTEYMPYGNLLDYLRE----CNREEVTAVVLLYMATQISSAMEYLEK---KNFIH 153
Query: 532 GDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTT 591
DL N L+G N V+DFGL+RL ++ + T
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRL---------------------------MTGDTYT 186
Query: 592 TNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
++ + + APESL S K D++++GV+L E+ T
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 132
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 165
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 218
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 219 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 707 DRLIVSS 713
+ + S
Sbjct: 267 ETMFQES 273
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 154
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + + E++L+
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 648 NWMQL 652
Q+
Sbjct: 215 FGCQV 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 223
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 224 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 271
Query: 707 DRLIVSS 713
+ + S
Sbjct: 272 ETMFQES 278
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 154
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + + E++L+
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 648 NWMQL 652
Q+
Sbjct: 215 FGCQV 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 145
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 178
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 231
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 232 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 279
Query: 707 DRLIVSS 713
+ + S
Sbjct: 280 ETMFQES 286
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 54/246 (21%)
Query: 411 LGKSGIGIVYK------VVLEDGHTLAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
+G+ G V++ + E +AV+ L E S + +FQ E + + + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 464 LRAYYWSVDEKLLIYDYIPNGSL----------------ATALHGKPGMVSFTPVPWSV- 506
L L+++Y+ G L + L + + S P P S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 507 -RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
++ I + +A G+ YL E +K+VH DL N L+G NM ++DFGL+R NI
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSR--NI----- 224
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
S + + + + + PES+ + + + D+++YGV+
Sbjct: 225 -------------------YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV 265
Query: 626 LLEMIT 631
L E+ +
Sbjct: 266 LWEIFS 271
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 152
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 181
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + + E++L+
Sbjct: 182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 241
Query: 648 NWMQL 652
Q+
Sbjct: 242 FGCQV 246
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAMEYLEK---KNF 130
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 163
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T ++ + + APESL K S K D++++GV+L E+ T
Sbjct: 164 FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T ++ + + APESL K S K D++++GV+L E+ T
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 170
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T ++ + + APESL K S K D++++GV+L E+ T
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 154
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + + E++L+
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 648 NWMQL 652
Q+
Sbjct: 215 FGCQV 219
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 154
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + + E++L+
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
Query: 648 NWMQL 652
Q+
Sbjct: 215 FGCQV 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 134
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 167
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 168 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 220
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 221 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 268
Query: 707 DRLIVSS 713
+ + S
Sbjct: 269 ETMFQES 275
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 427 GHTLAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483
G +AV+ L E G + + E+E + + H NIV + + LI +++P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543
GSL L ++ ++K I KG+ YL ++YVH DL N+L+
Sbjct: 98 GSLKEYLPKNKNKINLKQ-----QLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVES 149
Query: 544 NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQ 603
+ + DFGL + +++++ E T + ++
Sbjct: 150 EHQVKIGDFGLTK---------AIETDK----------------EXXTVKDDRDSPVFWY 184
Query: 604 APESLKVVKPSQKWDIYSYGVILLEMIT 631
APE L K D++S+GV L E++T
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
VLG V+ V G A++ + + + R + E+ + KI+H NIVTL Y
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
S L+ + G L + + G+ +T S+ +I+ + + YLHE
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILER-GV--YTEKDASL---VIQQVLSAVKYLHE---NG 126
Query: 529 YVHGDLKPSNILL---GHNMEPHVSDFGLARL-----ANIAGGSPTLQSNRMPAEKPQER 580
VH DLKP N+L N + ++DFGL+++ + A G+P + + A+KP +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPES 607
S+ V T +Y+ ES
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETES 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 142/354 (40%), Gaps = 80/354 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 12 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 64
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ SF P + V +A+G+ YL + KK +H DL N+
Sbjct: 125 LQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK------------------------ 217
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 218 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 270
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 271 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 54/293 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
+G G+V+ + +A++ + EG ++F E E + K+ H +V L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
L+ +++ +G L+ L + G+ + + + + + +G+ YL E +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC---VI 126
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+G N VSDFG+ R V +
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRF---------------------------VLDDQY 159
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T+++ + + +PE + S K D++S+GV++ E+ + G+ +SE+
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----- 214
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+E+ + P LA V +I C PE RP +
Sbjct: 215 ----VEDISTGFRLYKPRLAS--------THVYQIMNHCWRERPEDRPAFSRL 255
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 132
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 165
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 218
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 219 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 707 DRLIVSS 713
+ + S
Sbjct: 267 ETMFQES 273
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 427 GHTLAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483
G +AV+ L E G + + E+E + + H NIV + + LI +++P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543
GSL L ++ ++K I KG+ YL ++YVH DL N+L+
Sbjct: 110 GSLKEYLPKNKNKINLKQ-----QLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVES 161
Query: 544 NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQ 603
+ + DFGL + +++++ E T + ++
Sbjct: 162 EHQVKIGDFGLTK---------AIETDK----------------EXXTVKDDRDSPVFWY 196
Query: 604 APESLKVVKPSQKWDIYSYGVILLEMIT 631
APE L K D++S+GV L E++T
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 134
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 167
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 168 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 220
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 221 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 268
Query: 707 DRLIVSS 713
+ + S
Sbjct: 269 ETMFQES 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 132
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 165
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
T ++ + + APESL K S K D++++GV+L E+ T
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEK---KNF 378
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H +L N L+G N V+DFGL+RL ++ +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 411
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 412 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 464
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 465 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 512
Query: 707 DRLIVSS 713
+ + S
Sbjct: 513 ETMFQES 519
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 411 LGKSGIGIVYKVVL----EDGHTLAVRRL--GEGGSQRFKEFQTEVEAIGKIRHSNIVTL 464
L K G G K +L EDG ++ + S+ +E + EV + ++H NIV
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 465 RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMV--SFTPVPWSVRVKIIKGIAKGLVYLH 522
R + ++ DY G L ++ + G++ + W V+ I L ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ------ICLALKHVH 142
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQ 582
+ +K +H D+K NI L + + DFG+AR+ N T++ R P
Sbjct: 143 D---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-----STVELARACIGTP----- 189
Query: 583 KSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTA 635
YY +PE + + K DI++ G +L E+ T + A
Sbjct: 190 ------------------YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 122/341 (35%), Gaps = 97/341 (28%)
Query: 392 LDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEV 450
+D + D E+ ++G G G V+K DG T +RR+ + + EV
Sbjct: 6 VDKRFGMDFKEIE-----LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREV 56
Query: 451 EAIGKIRHSNIVTLRAYY-------WSVDEKLLIYDYIP--------------------- 482
+A+ K+ H NIV + + D+ L DY P
Sbjct: 57 KALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 483 -NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541
G+L + + G + + +++ + I KG+ Y+H KK +H DLKPSNI L
Sbjct: 117 DKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFL 169
Query: 542 GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY 601
+ + DFGL SL+ + S
Sbjct: 170 VDTKQVKIGDFGLV-----------------------------TSLKNDGKRTRSKGTLR 200
Query: 602 YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLA 661
Y +PE + ++ D+Y+ G+IL E L++ E K
Sbjct: 201 YMSPEQISSQDYGKEVDLYALGLILAE-----------------LLHVCDTAFETSKFFT 243
Query: 662 DVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702
D+ D ++ DK+E+ + + PE RP I
Sbjct: 244 DLRDGIISDIFDKKEKT-----LLQKLLSKKPEDRPNTSEI 279
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEK---KNF 339
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H +L N L+G N V+DFGL+RL ++ +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 372
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 425
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 426 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 473
Query: 707 DRLIVSS 713
+ + S
Sbjct: 474 ETMFQES 480
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 124/313 (39%), Gaps = 82/313 (26%)
Query: 410 VLGKSGIGIVYKVVLED--GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+GK G V+L D G+ +AV+ + + + F E + ++RHSN+V L
Sbjct: 200 TIGKGEFG---DVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 254
Query: 468 YWSVDEK---LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEF 524
V+EK ++ +Y+ GSL L + V + +K + + + YL
Sbjct: 255 I--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYL--- 305
Query: 525 SPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
+VH DL N+L+ + VSDFGL +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---------------------------- 337
Query: 585 VSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643
E ++T + L + APE+L+ K S K D++S+G++L E+ + GR ++
Sbjct: 338 ---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI---- 390
Query: 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEII-------AVLKIAMACVHSSPEKR 696
PL DV+ P +K ++ AV + C H R
Sbjct: 391 ---------------PLKDVV-----PRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR 430
Query: 697 PTMRHISDALDRL 709
PT + + L+ +
Sbjct: 431 PTFLQLREQLEHI 443
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 42/227 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRF--KEFQTEVEAIGKIRHSNIVTLRAYY 468
+G+ G+VYK G +A++R+ E+ + ++ H NIV+L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYLHEFSPK 527
S L+++++ K G+ ++KI + + +G+ + H+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQD-------SQIKIYLYQLLRGVAHCHQ---H 138
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ + ++DFGLAR A G P +S +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLAR----AFGIPV----------------RSYTH 178
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGR 633
EV T +Y+AP+ L K S DI+S G I EMITG+
Sbjct: 179 EVVTL--------WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 43/252 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 144
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 173
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR + GS M +
Sbjct: 174 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS-GSGSMAIF 232
Query: 648 NWMQLCIEEKKP 659
+ + E P
Sbjct: 233 ELLDYIVNEPPP 244
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSRFDE 111
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG N E ++DFG +
Sbjct: 112 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS--------- 159
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGV 624
P R+ TT + + Y PE ++ +K D++S GV
Sbjct: 160 ---------VHAPSSRR--------TTLCGTLD----YLPPEMIEGRMHDEKVDLWSLGV 198
Query: 625 ILLEMITG 632
+ E + G
Sbjct: 199 LCYEFLVG 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 42/227 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRF--KEFQTEVEAIGKIRHSNIVTLRAYY 468
+G+ G+VYK G +A++R+ E+ + ++ H NIV+L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI-IKGIAKGLVYLHEFSPK 527
S L+++++ K G+ ++KI + + +G+ + H+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQD-------SQIKIYLYQLLRGVAHCHQ---H 138
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ + ++DFGLAR A G P +S +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLAR----AFGIPV----------------RSYTH 178
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGR 633
EV T +Y+AP+ L K S DI+S G I EMITG+
Sbjct: 179 EVVTL--------WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 126/307 (41%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEK---KNF 336
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H +L N L+G N V+DFGL+RL ++ +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 369
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T ++ + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 370 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 422
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 423 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 470
Query: 707 DRLIVSS 713
+ + S
Sbjct: 471 ETMFQES 477
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E+ + +++H NIV L + ++ L+++++ N L + + + P + +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSR----TVGNTPRGLEL 107
Query: 509 KIIK----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
++K + +GL + HE K +H DLKP N+L+ + + DFGLAR A G
Sbjct: 108 NLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLAR----AFGI 160
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYG 623
P + S EV T +Y+AP+ L + S DI+S G
Sbjct: 161 PV----------------NTFSSEVVTL--------WYRAPDVLMGSRTYSTSIDIWSCG 196
Query: 624 VILLEMITGR 633
IL EMITG+
Sbjct: 197 CILAEMITGK 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSRFDE 111
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG N E ++DFG
Sbjct: 112 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 133
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 166
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T + + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 167 YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 219
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 220 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 267
Query: 707 DRLIVSS 713
+ + S
Sbjct: 268 ETMFQES 274
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G + L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ------KLSKFDE 112
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 113 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 159
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 160 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 199 VLCYEFLVGK 208
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 132/332 (39%), Gaps = 84/332 (25%)
Query: 391 PLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLED--GHTLAVRRLGEGGSQRFKEFQT 448
PL + A ++ EL +L G G V+L D G+ +AV+ + + + F
Sbjct: 2 PLGSGWALNMKELK-----LLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLA 54
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEK---LLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
E + ++RHSN+V L V+EK ++ +Y+ GSL L + V +
Sbjct: 55 EASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGD 108
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
+K + + + YL +VH DL N+L+ + VSDFGL +
Sbjct: 109 CLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------- 156
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
E ++T + L + APE+L+ S K D++S+G++
Sbjct: 157 ----------------------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGIL 194
Query: 626 LLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEII----- 679
L E+ + GR ++ PL DV+ P +K ++
Sbjct: 195 LWEIYSFGRVPYPRI-------------------PLKDVV-----PRVEKGYKMDAPDGC 230
Query: 680 --AVLKIAMACVHSSPEKRPTMRHISDALDRL 709
AV ++ C H RP+ + + L+ +
Sbjct: 231 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 60/289 (20%)
Query: 430 LAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++R+ E E E++A+ + H NIV+ + DE L+ + GS+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 489 AL-------HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541
+ K G++ + + I++ + +GL YLH+ +H D+K NILL
Sbjct: 103 IIKHIVAKGEHKSGVLDESTI-----ATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 542 GHNMEPHVSDFGL-ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS 600
G + ++DFG+ A LA GG T R + +G+
Sbjct: 155 GEDGSVQIADFGVSAFLAT--GGDITRNKVR-----------------------KTFVGT 189
Query: 601 -YYQAPESLKVVKPSQ-KWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE ++ V+ K DI+S+G+ +E+ TG + ++ + L ++
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-----LMLTLQNDP 244
Query: 659 PLAD--VLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT----MRH 701
P + V D + K + K+ C+ PEKRPT +RH
Sbjct: 245 PSLETGVQDKEMLKKYGK-----SFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 80/354 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 53 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 105
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 106 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 165
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ S+ P + V +A+G+ YL + KK +H DL N+
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 222
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------------------------ 258
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 259 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 311
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 312 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 93
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 144
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 182
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 183 YDKEXXSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 236
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 237 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 281
Query: 698 TM 699
+
Sbjct: 282 SF 283
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 58/307 (18%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VY+ V + T+AV+ L E + +EF E + +I+H N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+I +++ G+L L + V V + + I+ + YL + K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAMEYLEK---KNF 134
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DL N L+G N V+DFGL+RL ++ +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRL---------------------------MTGDT 167
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---MDL 646
T + + + APESL K S K D++++GV+L E+ T G S +DL
Sbjct: 168 YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDL 220
Query: 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+L ++ + + P P+ V ++ AC +P RP+ I A
Sbjct: 221 SQVYELLEKDYR----MERPEGCPE--------KVYELMRACWQWNPSDRPSFAEIHQAF 268
Query: 707 DRLIVSS 713
+ + S
Sbjct: 269 ETMFQES 275
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 83/307 (27%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNI 461
E+ + V+G G+V++ L + +A++++ + +RFK + ++ I ++H N+
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ--DKRFKNRELQIMRI--VKHPNV 94
Query: 462 VTLRAYYWSVDEKL------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIK--- 512
V L+A+++S +K L+ +Y+P + H + + ++ + +IK
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH-------YAKLKQTMPMLLIKLYM 147
Query: 513 -GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP-----HVSDFGLARLANIAGGSPT 566
+ + L Y+H H D+KP N+LL +P + DFG A++ + G P
Sbjct: 148 YQLLRSLAYIHSIG---ICHRDIKPQNLLL----DPPSGVLKLIDFGSAKI--LIAGEP- 197
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVI 625
N S YY+APE + + DI+S G +
Sbjct: 198 --------------------------NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCV 231
Query: 626 LLEMITGR------------TAVVQV-GSSEMDLVNWMQLCIEEKK-------PLADVLD 665
+ E++ G+ +++V G+ + + M E K P + V
Sbjct: 232 MAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFR 291
Query: 666 PYLAPDA 672
P PDA
Sbjct: 292 PRTPPDA 298
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 60/289 (20%)
Query: 430 LAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++R+ E E E++A+ + H NIV+ + DE L+ + GS+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 489 AL-------HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541
+ K G++ + + I++ + +GL YLH+ +H D+K NILL
Sbjct: 98 IIKHIVAKGEHKSGVLDESTI-----ATILREVLEGLEYLHK---NGQIHRDVKAGNILL 149
Query: 542 GHNMEPHVSDFGL-ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS 600
G + ++DFG+ A LA GG T R + +G+
Sbjct: 150 GEDGSVQIADFGVSAFLAT--GGDITRNKVR-----------------------KTFVGT 184
Query: 601 -YYQAPESLKVVKPSQ-KWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE ++ V+ K DI+S+G+ +E+ TG + ++ + L ++
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-----LMLTLQNDP 239
Query: 659 PLAD--VLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT----MRH 701
P + V D + K + K+ C+ PEKRPT +RH
Sbjct: 240 PSLETGVQDKEMLKKYGK-----SFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 45/228 (19%)
Query: 411 LGKSGIGIVYKVVLEDGH-TLAVRRLGEGGSQRF---KEFQTEVEAIGKIRHSNIVTLRA 466
LGK G VY + LA++ L + ++ + + EVE +RH NI+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
Y+ LI +Y P G++ L + I +A L Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITELANALSYCHS--- 152
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
K+ +H D+KP N+LLG E ++DFG S
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGW-------------------------------S 181
Query: 587 LEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ ++ ++ G+ Y PE ++ +K D++S GV+ E + G+
Sbjct: 182 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 112
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 113 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 159
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 160 ---------------------SVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLG 198
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 199 VLCYEFLVGK 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 39/189 (20%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 108
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG +
Sbjct: 109 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--------- 156
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGV 624
P R+ T S L Y PE ++ +K D++S GV
Sbjct: 157 ---------CHAPSSRR----------TTLSGTLD--YLPPEMIEGRMHDEKVDLWSLGV 195
Query: 625 ILLEMITGR 633
+ E + G+
Sbjct: 196 LCYEFLVGK 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 110
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLA 558
I +A L Y H K+ +H D+KP N+LLG E ++DFG +R A
Sbjct: 111 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 167
Query: 559 NIAGG----SPTLQSNRMPAEK 576
+ G P + RM EK
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEK 189
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 57/230 (24%)
Query: 405 KASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTL 464
K S F+L + +++K LE + G + + + EVE +RH NI+ L
Sbjct: 47 KQSKFILA---LKVLFKAQLE-----------KAGVEH--QLRREVEIQSHLRHPNILRL 90
Query: 465 RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEF 524
Y+ LI +Y P G++ L + I +A L Y H
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITELANALSYCHS- 143
Query: 525 SPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
K+ +H D+KP N+LLG E ++DFG
Sbjct: 144 --KRVIHRDIKPENLLLGSAGELKIADFGW------------------------------ 171
Query: 585 VSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
S+ ++ ++ G+ Y PE ++ +K D++S GV+ E + G+
Sbjct: 172 -SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G + L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ------KLSKFDE 112
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 113 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 60/291 (20%)
Query: 356 ENCYAKGGKGRKECLCF------RKDESETLSENVEQYDLVPLDTQVAFD-------LDE 402
EN Y +G + R+E R + E + EQ+ Q+ D LD
Sbjct: 22 ENLYFQGARARQENGMPEKPPGPRSPQREPQRVSHEQFRAA---LQLVVDPGDPRSYLDN 78
Query: 403 LLKASAFVLGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNI 461
+K +G+ GIV V G +AV+++ QR + EV + +H N+
Sbjct: 79 FIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 462 VTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
V + Y DE ++ +++ G+L +V+ T + + + + L L
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTD-------IVTHTRMNEEQIAAVCLAVLQALSVL 186
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQ 581
H + +H D+K +ILL H+ +SDFG A ++ P R+
Sbjct: 187 HA---QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVP--------------RR 227
Query: 582 QKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+ V Y+ APE + + + DI+S G++++EM+ G
Sbjct: 228 KXLVGT------------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 75/277 (27%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK---LLIYDYIPNGSLATALHGKPGMVSFT 500
+ F E + ++RHSN+V L V+EK ++ +Y+ GSL L + V
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--- 113
Query: 501 PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560
+ +K + + + YL +VH DL N+L+ + VSDFGL +
Sbjct: 114 -LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---- 165
Query: 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620
E ++T + L + APE+L+ K S K D++
Sbjct: 166 ---------------------------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 621 SYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEII 679
S+G++L E+ + GR ++ PL DV+ P +K ++
Sbjct: 199 SFGILLWEIYSFGRVPYPRI-------------------PLKDVV-----PRVEKGYKMD 234
Query: 680 -------AVLKIAMACVHSSPEKRPTMRHISDALDRL 709
AV ++ C H RP+ + + L+ +
Sbjct: 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 82/312 (26%)
Query: 411 LGKSGIGIVYKVVLED--GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+GK G V+L D G+ +AV+ + + + F E + ++RHSN+V L
Sbjct: 14 IGKGEFG---DVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 469 WSVDEK---LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
V+EK ++ +Y+ GSL L + V + +K + + + YL
Sbjct: 69 --VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE--- 119
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
+VH DL N+L+ + VSDFGL +
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----------------------------- 150
Query: 586 SLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEM 644
E ++T + L + APE+L+ K S K D++S+G++L E+ + GR ++
Sbjct: 151 --EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI----- 203
Query: 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEII-------AVLKIAMACVHSSPEKRP 697
PL DV+ P +K ++ AV ++ C H RP
Sbjct: 204 --------------PLKDVV-----PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRP 244
Query: 698 TMRHISDALDRL 709
+ + + L+ +
Sbjct: 245 SFLQLREQLEHI 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 112
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 113 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 159
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 160 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 199 VLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 154
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 155 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 194 VLCYEFLVGK 203
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 66/301 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 112
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 163
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 201
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 202 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 255
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 256 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 300
Query: 698 T 698
+
Sbjct: 301 S 301
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G+V++V G+ A + + + + E++ + +RH +V L +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+E ++IY+++ G L + + +S V+ ++ + KGL ++HE Y
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA-----VEYMRQVCKGLCHMHE---NNY 276
Query: 530 VHGDLKPSNILL--GHNMEPHVSDFGLA 555
VH DLKP NI+ + E + DFGL
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 411 LGKSGIGIVYKVVLEDGH-TLAVRRLGEGGSQRF---KEFQTEVEAIGKIRHSNIVTLRA 466
LGK G VY + LA++ L + ++ + + EVE +RH NI+ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
Y+ LI +Y P G++ L + I +A L Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITELANALSYCHS--- 152
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFG 553
K+ +H D+KP N+LLG E ++DFG
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G+V++V G+ A + + + + E++ + +RH +V L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+E ++IY+++ G L + + +S V+ ++ + KGL ++HE Y
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA-----VEYMRQVCKGLCHMHE---NNY 170
Query: 530 VHGDLKPSNILL--GHNMEPHVSDFGLA 555
VH DLKP NI+ + E + DFGL
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 110
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 111 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 157
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 158 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 197 VLCYEFLVGK 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 411 LGKSGIGIVYKVVLEDGH-TLAVRRLGEGGSQRF---KEFQTEVEAIGKIRHSNIVTLRA 466
LGK G VY ++ LA++ L + ++ + + EVE +RH NI+ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
Y+ LI +Y P G++ L + I +A L Y H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQ------KLSKFDEQRTATYITELANALSYCHS--- 126
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLANIAGG----SPTLQSNRMPAEK 576
KK +H D+KP N+LLG E ++DFG +R A + G P + RM EK
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
+E + EV + ++ H NI+TL Y + + +LI + + G L L K +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI-LLGHNME-PHVS--DFGLA 555
+ IK I G+ YLH KK H DLKP NI LL N+ PH+ DFGLA
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 91
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 142
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 180
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 181 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 234
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 235 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 279
Query: 698 TM 699
+
Sbjct: 280 SF 281
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 94
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 145
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 183
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 184 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 237
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 238 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 282
Query: 698 TM 699
+
Sbjct: 283 SF 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 92
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 143
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 181
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 182 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 235
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 236 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 280
Query: 698 TM 699
+
Sbjct: 281 SF 282
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 113
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 164
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 202
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 203 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 256
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 257 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 301
Query: 698 TM 699
+
Sbjct: 302 SF 303
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 108
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLA 558
I +A L Y H K+ +H D+KP N+LLG E ++DFG +R
Sbjct: 109 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165
Query: 559 NIAGG----SPTLQSNRMPAEK 576
++ G P + RM EK
Sbjct: 166 DLCGTLDYLPPEMIEGRMHDEK 187
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 86
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 137
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 175
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 176 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 229
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 230 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 274
Query: 698 TM 699
+
Sbjct: 275 SF 276
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLA 558
I +A L Y H K+ +H D+KP N+LLG E ++DFG +R
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 559 NIAGG----SPTLQSNRMPAEK 576
++ G P + RM EK
Sbjct: 165 DLCGTLDYLPPEMIEGRMHDEK 186
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 125
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG VS +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG-------------------------------VSGQ 154
Query: 589 VTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ + ++S +G+ Y +PE L+ S + DI+S G+ L+EM GR +
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLA 558
I +A L Y H K+ +H D+KP N+LLG E ++DFG +R
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 559 NIAGG----SPTLQSNRMPAEK 576
++ G P + RM EK
Sbjct: 165 DLCGTLDYLPPEMIEGRMHDEK 186
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 112
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLA 558
I +A L Y H K+ +H D+KP N+LLG E ++DFG +R
Sbjct: 113 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 559 NIAGG----SPTLQSNRMPAEK 576
++ G P + RM EK
Sbjct: 170 DLCGTLDYLPPEMIEGRMHDEK 191
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 89
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 140
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 178
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 179 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 232
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 233 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 277
Query: 698 TM 699
+
Sbjct: 278 SF 279
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL------ARLA 558
I +A L Y H K+ +H D+KP N+LLG E ++DFG +R A
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164
Query: 559 NIAGG----SPTLQSNRMPAEK 576
+ G P + RM EK
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEK 186
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 434 RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK 493
R G R +E + EV + ++ H N++TL Y + + +LI + + G L L K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 494 PGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI-LLGHNME-PHVS- 550
+ + IK I G+ YLH KK H DLKP NI LL N+ PH+
Sbjct: 110 ESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 551 -DFGLA 555
DFGLA
Sbjct: 161 IDFGLA 166
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 154
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ + G+ Y PE ++ +K D++S G
Sbjct: 155 ---------------------SVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 194 VLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 111
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 112 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 158
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 159 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 198 VLCYEFLVGK 207
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 94
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 145
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 183
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 184 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 237
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 238 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 282
Query: 698 TM 699
+
Sbjct: 283 SF 284
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 434 RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK 493
R G R +E + EV + ++ H N++TL Y + + +LI + + G L L K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 494 PGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI-LLGHNME-PHVS- 550
+ + IK I G+ YLH KK H DLKP NI LL N+ PH+
Sbjct: 110 ESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 551 -DFGLA 555
DFGLA
Sbjct: 161 IDFGLA 166
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 109
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 110 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFL 142
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEE 175
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 229
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 230 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 278
Query: 706 LD 707
+D
Sbjct: 279 MD 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 411 LGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ GIV V G +AV+++ QR + EV + +H N+V + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +++ G+L +V+ T + + + + L LH +
Sbjct: 88 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K +ILL H+ +SDFG A ++ P R++ V
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVP--------------RRKXLVG--- 178
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
Y+ APE + + + DI+S G++++EM+ G
Sbjct: 179 ---------TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 108
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 109 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 106
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 107 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 153
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 154 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 192
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 193 VLCYEFLVGK 202
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 442 RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL----ATALHGKPGMV 497
++ +F+ E++ I I++ +T + DE +IY+Y+ N S+
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 498 SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
F P+ V IIK + Y+H + K H D+KPSNIL+ N +SDFG +
Sbjct: 146 CFIPI--QVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 558 ---ANIAGGSPTLQSNRMPAE 575
I G T + MP E
Sbjct: 202 MVDKKIKGSRGTYEF--MPPE 220
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 93
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 144
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ YL + KK+VH DL N +L V+DFGLAR
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 182
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 183 YDKEYYSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 236
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 237 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 281
Query: 698 TM 699
+
Sbjct: 282 SF 283
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 104
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 105 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 151
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 152 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 190
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 191 VLCYEFLVGK 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 110
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 111 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW---------- 157
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 158 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 197 VLCYEFLVGK 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 434 RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK 493
R G R +E + EV + ++ H N++TL Y + + +LI + + G L L K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 494 PGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI-LLGHNME-PHVS- 550
+ + IK I G+ YLH KK H DLKP NI LL N+ PH+
Sbjct: 110 ESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 551 -DFGLA 555
DFGLA
Sbjct: 161 IDFGLA 166
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 411 LGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ GIV V G +AV+++ QR + EV + +H N+V + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +++ G+L +V+ T + + + + L LH +
Sbjct: 97 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 146
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K +ILL H+ +SDFG A ++ P R++ V
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVP--------------RRKXLVG--- 187
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
Y+ APE + + + DI+S G++++EM+ G
Sbjct: 188 ---------TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 127
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEY 160
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 214
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 215 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 263
Query: 706 LD 707
+D
Sbjct: 264 MD 265
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPV 502
+ + E+E +RH NI+ + Y+ L+ ++ P G L L HG+
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--------F 111
Query: 503 PWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
++ +A L Y HE +K +H D+KP N+L+G+ E ++DFG
Sbjct: 112 DEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 398 FDLDELLKASAFVLGKS----GIGIVYKV-VLEDGHTLAVRRLGEGGSQRFKEFQTEVEA 452
+D+ E L + F + K G+ Y ++ + A RR G R +E + EV
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR----GVSR-EEIEREVSI 68
Query: 453 IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIK 512
+ ++ H N++TL Y + + +LI + + G L L K + + IK
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF------IK 122
Query: 513 GIAKGLVYLHEFSPKKYVHGDLKPSNI-LLGHNME-PHVS--DFGLA 555
I G+ YLH KK H DLKP NI LL N+ PH+ DFGLA
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPV 502
+ + E+E +RH NI+ + Y+ L+ ++ P G L L HG+
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--------F 112
Query: 503 PWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
++ +A L Y HE +K +H D+KP N+L+G+ E ++DFG
Sbjct: 113 DEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ G VY + + G +A+R++ + + E+ + + ++ NIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +Y+ GSL +V+ T + + + + L +LH +
Sbjct: 88 VGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---NQV 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K NILLG + ++DFG A +P QS R
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPE-QSKR------------------ 173
Query: 590 TTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S+ +G+ Y+ APE + K DI+S G++ +EMI G
Sbjct: 174 -----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFL 142
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEY 175
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 229
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 230 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 278
Query: 706 LD 707
+D
Sbjct: 279 MD 280
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPV 502
+ + E+E +RH NI+ + Y+ L+ ++ P G L L HG+
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--------F 111
Query: 503 PWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
++ +A L Y HE +K +H D+KP N+L+G+ E ++DFG
Sbjct: 112 DEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 80/354 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 12 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 64
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ S+ P + V +A+G+ YL + KK +H DL N+
Sbjct: 125 LQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------------------------ 217
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 218 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 270
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 271 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 411 LGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ GIV V G +AV+++ QR + EV + +H N+V + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +++ G+L +V+ T + + + + L LH +
Sbjct: 99 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 148
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K +ILL H+ +SDFG A ++ P R++ V
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVP--------------RRKXLVG--- 189
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
Y+ APE + + + DI+S G++++EM+ G
Sbjct: 190 ---------TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 80/354 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 12 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 64
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ S+ P + V +A+G+ YL + KK +H DL N+
Sbjct: 125 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------------------------ 217
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 218 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 270
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 271 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 80/354 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 4 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 56
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 57 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 116
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ S+ P + V +A+G+ YL + KK +H DL N+
Sbjct: 117 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 173
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 174 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------------------------ 209
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 210 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 262
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 263 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 411 LGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ GIV V G +AV+++ QR + EV + +H N+V + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +++ G+L +V+ T + + + + L LH +
Sbjct: 92 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGV 141
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K +ILL H+ +SDFG A ++ P R++ V
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVP--------------RRKXLVG--- 182
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
Y+ APE + + + DI+S G++++EM+ G
Sbjct: 183 ---------TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 38/186 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV + ++H+NIVTL + L+++Y+ + L L +++ V
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL---- 104
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+ + +GL Y H +K +H DLKP N+L+ E ++DFGLAR +I PT
Sbjct: 105 -FLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI----PT-- 154
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES-LKVVKPSQKWDIYSYGVILL 627
K+ EV T +Y+ P+ L S + D++ G I
Sbjct: 155 --------------KTYDNEVVTL--------WYRPPDILLGSTDYSTQIDMWGVGCIFY 192
Query: 628 EMITGR 633
EM TGR
Sbjct: 193 EMATGR 198
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 110
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 111 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 186
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 187 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 49/252 (19%)
Query: 397 AFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI 456
+ DLD L ++G+ G VYK L D +AV+ Q F + + + +
Sbjct: 9 SLDLDNLKLLE--LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLM 64
Query: 457 RHSNIVTL-----RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKII 511
H NI R E LL+ +Y PNGSL L S W ++
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-------SLHTSDWVSSCRLA 117
Query: 512 KGIAKGLVYLHEFSPK------KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
+ +GL YLH P+ H DL N+L+ ++ +SDFGL S
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL---------SM 168
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-------VVKPSQKWD 618
L NR+ +P E ++S EV T Y APE L+ ++ D
Sbjct: 169 RLTGNRLV--RPGEEDNAAIS-EVGTIR--------YMAPEVLEGAVNLRDXESALKQVD 217
Query: 619 IYSYGVILLEMI 630
+Y+ G+I E+
Sbjct: 218 MYALGLIYWEIF 229
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 142/353 (40%), Gaps = 80/353 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 5 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 57
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 58 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 117
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ S+ P + V +A+G+ YL + KK +H DL N+
Sbjct: 118 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 174
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 175 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------------------------ 210
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 211 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 263
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLI 710
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 264 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 66/308 (21%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 171
Query: 580 RQQKSVSLEVTTTNSSSNLGS-----YYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634
++ T+ G + +PESLK + D++S+GV+L E+ T
Sbjct: 172 --------DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 223
Query: 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPE 694
Q S+E L M+ + +K P PD +L++ C +P+
Sbjct: 224 QPYQGLSNEQVLRFVMEGGLLDK--------PDNCPD--------MLLELMRMCWQYNPK 267
Query: 695 KRPTMRHI 702
RP+ I
Sbjct: 268 MRPSFLEI 275
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 44/234 (18%)
Query: 400 LDELLKASAFVLGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH 458
LD +K +G+ GIV V G +AV+++ QR + EV + +H
Sbjct: 153 LDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 207
Query: 459 SNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
N+V + Y DE ++ +++ G+L +V+ T + + + + L
Sbjct: 208 ENVVEMYNSYLVGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQAL 260
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
LH + +H D+K +ILL H+ +SDFG A ++ P
Sbjct: 261 SVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVP------------- 302
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
R++ V Y+ APE + + + DI+S G++++EM+ G
Sbjct: 303 -RRKXLVGT------------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 44/238 (18%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVTLRAYY 468
LG+ G G+V++ + D A++R+ + +E EV+A+ K+ H IV Y+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR---YF 69
Query: 469 --W---SVDEKLL-----IYDYIP-----NGSLATALHGKPGMVSFTPVPWSVRVKIIKG 513
W + EKL +Y YI +L ++G+ + SV + I
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR---CTIEERERSVCLHIFLQ 126
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
IA+ + +LH K +H DLKPSNI + V DFGL +
Sbjct: 127 IAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL-----------------VT 166
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
A E +Q ++ + +G+ Y +PE + S K DI+S G+IL E++
Sbjct: 167 AMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 434 RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK 493
R G R +E + EV + ++ H N++TL Y + + +LI + + G L L K
Sbjct: 51 RASRRGVSR-EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK 109
Query: 494 PGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI-LLGHNME-PHVS- 550
+ + IK I G+ YLH KK H DLKP NI LL N+ PH+
Sbjct: 110 ESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 551 -DFGLA 555
DFGLA
Sbjct: 161 IDFGLA 166
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 133/334 (39%), Gaps = 73/334 (21%)
Query: 404 LKASAFVLGKS-GIGIVYKVVLEDGHTL-----------AVRRLGEGGSQR-FKEFQTEV 450
L VLGK G G +VVL + L AV+ L +++ + +E+
Sbjct: 14 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 73
Query: 451 EAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK--PGM-VSFTP----- 501
E + I +H NI+ L +I +Y G+L L + PG+ S+ P
Sbjct: 74 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 502 --VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559
+ V +A+G+ YL + KK +H DL N+L+ + ++DFGLAR +
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDI 619
+ R+P + + APE+L + + D+
Sbjct: 191 HIDYYKKTTNGRLPVK--------------------------WMAPEALFDRIYTHQSDV 224
Query: 620 YSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI 678
+S+GV+L E+ T G + V E+ +L E + DK
Sbjct: 225 WSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR-------------MDKPSNC 266
Query: 679 IAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
L + M C H+ P +RPT + + + LDR++
Sbjct: 267 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 127
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEY 160
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 214
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 215 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 263
Query: 706 LD 707
+D
Sbjct: 264 MD 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 107
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 108 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 110
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553
I +A L Y H K+ +H D+KP N+LLG E ++DFG
Sbjct: 111 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 176
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 177 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 153
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 204
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 242
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 243 YDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 296
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 297 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 341
Query: 698 TM 699
+
Sbjct: 342 SF 343
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 50/237 (21%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 180
Query: 580 RQQKSVSLEVTTTNSSSNLGS-----YYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
++ T+ G + +PESLK + D++S+GV+L E+ T
Sbjct: 181 --------DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ G VY + + G +A+R++ + + E+ + + ++ NIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +Y+ GSL +V+ T + + + + L +LH +
Sbjct: 88 VGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---NQV 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K NILLG + ++DFG A +P QS R
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPE-QSKR------------------ 173
Query: 590 TTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S +G+ Y+ APE + K DI+S G++ +EMI G
Sbjct: 174 -----SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 126
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEY 159
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 213
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 214 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 262
Query: 706 LD 707
+D
Sbjct: 263 MD 264
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ G VY + + G +A+R++ + + E+ + + ++ NIV Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +Y+ GSL +V+ T + + + + L +LH +
Sbjct: 89 VGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---NQV 138
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K NILLG + ++DFG A +P QS R
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPE-QSKR------------------ 174
Query: 590 TTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S +G+ Y+ APE + K DI+S G++ +EMI G
Sbjct: 175 -----SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 133
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEY 166
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 220
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 221 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 269
Query: 706 LD 707
+D
Sbjct: 270 MD 271
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 95
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 146
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 184
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 185 YDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 238
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 239 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 283
Query: 698 TM 699
+
Sbjct: 284 SF 285
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 94
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 145
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 183
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 184 YDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 237
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 238 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 282
Query: 698 TM 699
+
Sbjct: 283 SF 284
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 58/302 (19%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
LG G+V + +A++ + EG S EF E + + + H +V L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+I +Y+ NG L L + +++ K + + + YL K+++
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYL---ESKQFL 122
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DL N L+ VSDFGL+R V +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRY---------------------------VLDDEY 155
Query: 591 TTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNW 649
T++ S + PE L K S K DI+++GV++ E+ + G+ + +SE
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------ 209
Query: 650 MQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR----HISDA 705
E + P+LA + V I +C H ++RPT + +I D
Sbjct: 210 ---TAEHIAQGLRLYRPHLASE--------KVYTIMYSCWHEKADERPTFKILLSNILDV 258
Query: 706 LD 707
+D
Sbjct: 259 MD 260
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHG--KPGMVSFTPVPWSV 506
E++ + + RH N++ +R + + + YI + T L+ K +S + +
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-- 148
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I +GL Y+H +H DLKPSN+L+ + + DFGLAR+A+
Sbjct: 149 ---FLYQILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIAD------- 195
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVI 625
P+ ++ V T +Y+APE + K K DI+S G I
Sbjct: 196 ----------PEHDHTGFLTEXVAT--------RWYRAPEIMLNSKGYTKSIDIWSVGCI 237
Query: 626 LLEMITGR 633
L EM++ R
Sbjct: 238 LAEMLSNR 245
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 99
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 150
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 188
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 189 YDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 242
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 243 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 287
Query: 698 TM 699
+
Sbjct: 288 SF 289
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ G VY + + G +A+R++ + + E+ + + ++ NIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +Y+ GSL +V+ T + + + + L +LH +
Sbjct: 88 VGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---NQV 137
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K NILLG + ++DFG A +P QS R
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPE-QSKR------------------ 173
Query: 590 TTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S +G+ Y+ APE + K DI+S G++ +EMI G
Sbjct: 174 -----SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHPNVL 92
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 143
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 181
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 182 YDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 235
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 236 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 280
Query: 698 TM 699
+
Sbjct: 281 SF 282
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 95
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 146
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 184
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 185 LDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 238
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 239 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 283
Query: 698 TM 699
+
Sbjct: 284 SF 285
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 66/302 (21%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTL-----AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
V+G+ G VY L DG + ++ R+ + G +F TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--EVSQFLTEGIIMKDFSHPNVL 94
Query: 463 TLRAY-YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----IAKG 517
+L S L++ Y+ +G L + + + P VK + G +AKG
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE----THNPT-----VKDLIGFGLQVAKG 145
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +L + KK+VH DL N +L V+DFGLAR
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-------------------DM 183
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+++ SV + + L + A ESL+ K + K D++S+GV+L E++T R A
Sbjct: 184 YDKEFDSVH-----NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPP 237
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697
+ D+ ++ ++ ++ +L P PD + ++ + C H E RP
Sbjct: 238 YPDVNTFDITVYL---LQGRR----LLQPEYCPD--------PLYEVMLKCWHPKAEMRP 282
Query: 698 TM 699
+
Sbjct: 283 SF 284
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 118/328 (35%), Gaps = 84/328 (25%)
Query: 392 LDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEV 450
+D + D E+ ++G G G V+K DG T ++R+ + + EV
Sbjct: 5 VDKRFGMDFKEIE-----LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREV 55
Query: 451 EAIGKIRHSNIVTLRAYYWSVDEK----------------LLIYDYIPNGSLATALHGKP 494
+A+ K+ H NIV + D + ++ G+L + +
Sbjct: 56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115
Query: 495 GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554
G + + +++ + I KG+ Y+H KK ++ DLKPSNI L + + DFGL
Sbjct: 116 G----EKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPS 614
SL+ S Y +PE +
Sbjct: 169 V-----------------------------TSLKNDGKRXRSKGTLRYMSPEQISSQDYG 199
Query: 615 QKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADK 674
++ D+Y+ G+IL E L++ E K D+ D ++ DK
Sbjct: 200 KEVDLYALGLILAE-----------------LLHVCDTAFETSKFFTDLRDGIISDIFDK 242
Query: 675 EEEIIAVLKIAMACVHSSPEKRPTMRHI 702
+E+ + + PE RP I
Sbjct: 243 KEKT-----LLQKLLSKKPEDRPNTSEI 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 109
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E +++FG
Sbjct: 110 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGW---------- 156
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 157 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 196 VLCYEFLVGK 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 43/197 (21%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+A+G+ YL E +K+VH DL N +L + V+DFGLAR + +
Sbjct: 133 VARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLAR-------------DILD 176
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
E +Q + L V T A ESL+ + + K D++S+GV+L E++T R
Sbjct: 177 REYYSVQQHRHARLPVKWT-----------ALESLQTYRFTTKSDVWSFGVLLWELLT-R 224
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
A DL ++ L + P P PD ++ ++ C + P
Sbjct: 225 GAPPYRHIDPFDLTHF--LAQGRRLP-----QPEYCPD--------SLYQVMQQCWEADP 269
Query: 694 EKRPTMRHISDALDRLI 710
RPT R + +++++
Sbjct: 270 AVRPTFRVLVGEVEQIV 286
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L T + + T +P + + + +GL + H
Sbjct: 70 IHTENKLYLVFEHV-HQDLKTFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 121
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 161
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 162 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 210
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 134/341 (39%), Gaps = 84/341 (24%)
Query: 389 LVPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQR 442
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 4 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 59
Query: 443 FK-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH---------- 491
+ EF E + ++V L L++ + + +G L + L
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 492 GKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551
G+P P +++ IA G+ YL+ KK+VH DL N ++ H+ + D
Sbjct: 120 GRP------PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGD 170
Query: 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-----YYQAPE 606
FG+ R ++ T+ G + APE
Sbjct: 171 FGMTR-------------------------------DIXETDXXRKGGKGLLPVRWMAPE 199
Query: 607 SLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD- 665
SLK + D++S+GV+L E+ + Q S+E + L V+D
Sbjct: 200 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLKFVMDG 245
Query: 666 PYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
YL + E + ++++ C +P+ RPT I + L
Sbjct: 246 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 283
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 141/354 (39%), Gaps = 80/354 (22%)
Query: 384 VEQYDLVPLDTQVAFDLDELLKASAFVLGKS-GIGIVYKVVLEDGHTL-----------A 431
V +Y+L P D + D L VLGK G G +VVL + L A
Sbjct: 12 VSEYEL-PEDPRWELPRDRL------VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA 64
Query: 432 VRRLGEGGSQR-FKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
V+ L +++ + +E+E + I +H NI+ L +I +Y G+L
Sbjct: 65 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 490 LHGK--PGM-VSFTP-------VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L + PG+ + P + V +A+G+ YL + KK +H DL N+
Sbjct: 125 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
L+ + ++DFGLAR + + R+P +
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------------------------ 217
Query: 600 SYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKK 658
+ APE+L + + D++S+GV+L E+ T G + V E+ +L E +
Sbjct: 218 --WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR 270
Query: 659 PLADVLDPYLAPDADKEEEIIAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
DK L + M C H+ P +RPT + + + LDR++
Sbjct: 271 -------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 40/209 (19%)
Query: 427 GHTLAVRRL-GEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPN 483
G +AV+ L + G Q ++ E++ + + H +I+ + EK L+ +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 484 GSLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542
GSL L G+ + + I +G+ YLH + Y+H +L N+LL
Sbjct: 103 GSLRDYLPRHSIGLAQL--------LLFAQQICEGMAYLHS---QHYIHRNLAARNVLLD 151
Query: 543 HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYY 602
++ + DFGLA+ P+ E + ++
Sbjct: 152 NDRLVKIGDFGLAKAV------------------PE-------GHEYYRVREDGDSPVFW 186
Query: 603 QAPESLKVVKPSQKWDIYSYGVILLEMIT 631
APE LK K D++S+GV L E++T
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 134/341 (39%), Gaps = 84/341 (24%)
Query: 389 LVPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQR 442
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 7 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 443 FK-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH---------- 491
+ EF E + ++V L L++ + + +G L + L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 492 GKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551
G+P P +++ IA G+ YL+ KK+VH DL N ++ H+ + D
Sbjct: 123 GRP------PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-----YYQAPE 606
FG+ R ++ T+ G + APE
Sbjct: 174 FGMTR-------------------------------DIXETDXXRKGGKGLLPVRWMAPE 202
Query: 607 SLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD- 665
SLK + D++S+GV+L E+ + Q S+E + L V+D
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLKFVMDG 248
Query: 666 PYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
YL + E + ++++ C +P+ RPT I + L
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 40/209 (19%)
Query: 427 GHTLAVRRL-GEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPN 483
G +AV+ L + G Q ++ E++ + + H +I+ + EK L+ +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 484 GSLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542
GSL L G+ + + I +G+ YLH + Y+H +L N+LL
Sbjct: 103 GSLRDYLPRHSIGLAQL--------LLFAQQICEGMAYLH---AQHYIHRNLAARNVLLD 151
Query: 543 HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYY 602
++ + DFGLA+ P+ E + ++
Sbjct: 152 NDRLVKIGDFGLAKAV------------------PE-------GHEYYRVREDGDSPVFW 186
Query: 603 QAPESLKVVKPSQKWDIYSYGVILLEMIT 631
APE LK K D++S+GV L E++T
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 45/231 (19%)
Query: 406 ASAFVLGKSGIGIVYKVVLEDGHT---LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV 462
A+ +G+ GIV + + HT +AV+++ QR + EV + H N+V
Sbjct: 48 ANFIKIGEGSTGIV--CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVV 105
Query: 463 TLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
+ + Y DE ++ +++ G+L +V+ T + + + + L YLH
Sbjct: 106 DMYSSYLVGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIATVCLSVLRALSYLH 158
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQ 582
+ +H D+K +ILL + +SDFG A + S +P K
Sbjct: 159 N---QGVIHRDIKSDSILLTSDGRIKLSDFGFC--AQV--------SKEVPKRK------ 199
Query: 583 KSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+G+ Y+ APE + + + DI+S G++++EMI G
Sbjct: 200 -------------XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 62/317 (19%)
Query: 410 VLGKSGIGIVYKVVL--EDGHTLAV----RRLGEGGSQRFKEFQTEVEAIGKIRHSNIVT 463
+LG+ G V + L EDG +L V +L + +EF +E + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 464 LRAYYWSVDEK-----LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
L + + ++I ++ G L T L +P +K + IA G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSN--RMPAEK 576
YL S + ++H DL N +L +M V+DFGL++ I G Q +MP +
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK--KIYSGDYYRQGRIAKMPVK- 214
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635
+ A ESL + K D++++GV + E+ T G T
Sbjct: 215 -------------------------WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK 695
V + EM +++ K+P D LD + +I +C + P
Sbjct: 250 YPGVQNHEM--YDYLLHGHRLKQP-EDCLD--------------ELYEIMYSCWRTDPLD 292
Query: 696 RPTMRHISDALDRLIVS 712
RPT + L++L+ S
Sbjct: 293 RPTFSVLRLQLEKLLES 309
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 410 VLGKSGIGIVYK-VVLEDGHTLAVRRL-----GEGGSQRFKEFQTEVEAIGKIRHSNIVT 463
VLG G V+K V + +G ++ + + G Q F+ + AIG + H++IV
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTP---VPWSVRVKIIKGIAKGLVY 520
L +L + Y+P GSL + G + P + W V+ IAKG+ Y
Sbjct: 98 LLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQ------IAKGMYY 148
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
L E VH +L N+LL + V+DFG+A L +P P ++
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL--------------LP---PDDK 188
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
Q S + + A ES+ K + + D++SYGV + E++T
Sbjct: 189 Q---------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG--EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G+V+KV + + R+L E + E++ + + IV +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+S E + +++ GSL L K G + P + K+ + KGL YL E K
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLK-KAGRI-----PEQILGKVSIAVIKGLTYLRE--KHK 128
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H D+KPSNIL+ E + DFG+ S ++ E ++ E
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGV--------------SGQLIDE---------MANE 165
Query: 589 VTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
T S Y +PE L+ S + DI+S G+ L+EM GR
Sbjct: 166 FVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ + EVE +RH NI+ L Y+ LI +Y P G++ L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ------KLSKFDE 110
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564
I +A L Y H K+ +H D+KP N+LLG E +++FG
Sbjct: 111 QRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGW---------- 157
Query: 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYG 623
S+ ++ ++ G+ Y PE ++ +K D++S G
Sbjct: 158 ---------------------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 624 VILLEMITGR 633
V+ E + G+
Sbjct: 197 VLCYEFLVGK 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 73/334 (21%)
Query: 404 LKASAFVLGKS-GIGIVYKVVLEDGHTL-----------AVRRLGEGGSQR-FKEFQTEV 450
L VLGK G G +VVL + L AV+ L +++ + +E+
Sbjct: 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69
Query: 451 EAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK--PGM-VSFTP----- 501
E + I +H NI+ L +I +Y G+L L + PG+ + P
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 502 --VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559
+ V +A+G+ YL + KK +H DL N+L+ + ++DFGLAR +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDI 619
+ R+P + + APE+L + + D+
Sbjct: 187 HIDYYKKTTNGRLPVK--------------------------WMAPEALFDRIYTHQSDV 220
Query: 620 YSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI 678
+S+GV+L E+ T G + V E+ +L E + DK
Sbjct: 221 WSFGVLLWEIFTLGGSPYPGVPVEEL-----FKLLKEGHR-------------MDKPSNC 262
Query: 679 IAVLKIAMA-CVHSSPEKRPTMRHISDALDRLIV 711
L + M C H+ P +RPT + + + LDR++
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L T + + T +P + + + +GL + H
Sbjct: 74 IHTENKLYLVFEFL-HQDLKTFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 125
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 165
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 166 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 214
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 177
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 178 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 410 VLGKSGIGIVYK-VVLEDGHTLAVRRL-----GEGGSQRFKEFQTEVEAIGKIRHSNIVT 463
VLG G V+K V + +G ++ + + G Q F+ + AIG + H++IV
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTP---VPWSVRVKIIKGIAKGLVY 520
L +L + Y+P GSL + G + P + W V+ IAKG+ Y
Sbjct: 80 LLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQ------IAKGMYY 130
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
L E VH +L N+LL + V+DFG+A L +P P ++
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL--------------LP---PDDK 170
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
Q S + + A ES+ K + + D++SYGV + E++T
Sbjct: 171 Q---------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 186
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 187 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 66/264 (25%)
Query: 390 VPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRF 443
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 8 VPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 444 K-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH----------G 492
+ EF E + ++V L L++ + + +G L + L G
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 493 KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552
+P P +++ IA G+ YL+ KK+VH DL N ++ H+ + DF
Sbjct: 124 RP------PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDF 174
Query: 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-----YYQAPES 607
G+ R ++ T+ G + APES
Sbjct: 175 GMTR-------------------------------DIXETDXXRKGGKGLLPVRWMAPES 203
Query: 608 LKVVKPSQKWDIYSYGVILLEMIT 631
LK + D++S+GV+L E+ +
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 180
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 181 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 179
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 180 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
+E + EV + +IRH NI+TL + + + +LI + + G L L K +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH----VSDFGLA 555
+ +K I G+ YLH K+ H DLKP NI+L P+ + DFG+A
Sbjct: 134 F------LKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+G+ G VY + + G +A+R++ + + E+ + + ++ NIV Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
DE ++ +Y+ GSL +V+ T + + + + L +LH +
Sbjct: 89 VGDELWVVMEYLAGGSLT-------DVVTETCMDEGQIAAVCRECLQALEFLHS---NQV 138
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H ++K NILLG + ++DFG A +P QS R
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFC-----AQITPE-QSKR------------------ 174
Query: 590 TTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S+ +G+ Y+ APE + K DI+S G++ +EMI G
Sbjct: 175 -----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 393 DTQVAFDLDELLKASAFVL----GKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQT 448
D + +++ E L + F + + G G Y L+ R G +E +
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSR----EEIER 64
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV + +IRH NI+TL + + + +LI + + G L L K +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE------DEAT 118
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH----VSDFGLA 555
+ +K I G+ YLH K+ H DLKP NI+L P+ + DFG+A
Sbjct: 119 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 173
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 174 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 40/209 (19%)
Query: 427 GHTLAVRRL-GEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK--LLIYDYIPN 483
G +AV+ L + G Q ++ E++ + + H +I+ + L+ +Y+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 484 GSLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542
GSL L G+ + + I +G+ YLH + Y+H DL N+LL
Sbjct: 120 GSLRDYLPRHSIGLAQL--------LLFAQQICEGMAYLH---AQHYIHRDLAARNVLLD 168
Query: 543 HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYY 602
++ + DFGLA+ P+ + V + ++
Sbjct: 169 NDRLVKIGDFGLAKAV------------------PEGHEXYRV-------REDGDSPVFW 203
Query: 603 QAPESLKVVKPSQKWDIYSYGVILLEMIT 631
APE LK K D++S+GV L E++T
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
+E + EV + +IRH NI+TL + + + +LI + + G L L K +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH----VSDFGLA 555
+ +K I G+ YLH K+ H DLKP NI+L P+ + DFG+A
Sbjct: 113 F------LKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L+ L + T +P + + + +GL + H
Sbjct: 74 IHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 125
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 165
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 166 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 214
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 179
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 180 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N ++ + + DFG+ R
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----------------------- 208
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ L + +PESLK + D++S+GV+L E+ T
Sbjct: 209 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L+ L + T +P + + + +GL + H
Sbjct: 73 IHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 124
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 164
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 165 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 48/228 (21%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VYK ++ LA ++ E S+ +++ E+E + H IV L Y+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 470 SVDEKLLIYDYIPNGSL-ATALHGKPGMVSFTPVPWSVRVKII-KGIAKGLVYLHEFSPK 527
+ ++ ++ P G++ A L G+ +++++ + + + L +LH K
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE-------PQIQVVCRQMLEALNFLHS---K 128
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLK N+L+ + ++DFG++ A TLQ
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKR----------------- 166
Query: 588 EVTTTNSSSNLGS-YYQAP-----ESLKVVKPSQKWDIYSYGVILLEM 629
S +G+ Y+ AP E++K K DI+S G+ L+EM
Sbjct: 167 -------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 74/336 (22%)
Query: 389 LVPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQR 442
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 7 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 443 FK-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH---------- 491
+ EF E + ++V L L++ + + +G L + L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 492 GKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551
G+P P +++ IA G+ YL + KK+VH DL N ++ H+ + D
Sbjct: 123 GRP------PPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV 611
FG+ R + L + APESLK
Sbjct: 174 FGMTR--------------------------DIYETDYYRKGGKGLLPVRWMAPESLKDG 207
Query: 612 KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD-PYLAP 670
+ D++S+GV+L E+ + Q S+E + L V+D YL
Sbjct: 208 VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLKFVMDGGYLDQ 253
Query: 671 DADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+ E + ++++ C +P+ RPT I + L
Sbjct: 254 PDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VYK ++ LA ++ E S+ +++ E+E + H IV L Y+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 470 SVDEKLLIYDYIPNGSL-ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ ++ ++ P G++ A L G+ P ++V + + + + L +LH K+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE----P-QIQV-VCRQMLEALNFLHS---KR 137
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLE 588
+H DLK N+L+ + ++DFG++ A TLQ
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKR------------------ 174
Query: 589 VTTTNSSSNLGS-YYQAP-----ESLKVVKPSQKWDIYSYGVILLEM 629
S +G+ Y+ AP E++K K DI+S G+ L+EM
Sbjct: 175 ------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L+ L + T +P + + + +GL + H
Sbjct: 74 IHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 125
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 165
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 166 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 47/237 (19%)
Query: 402 ELLKASAFVLGKSGIGIVY---KVVLEDGHTLAVRRLGEGGSQRFKE---FQTEVEAIGK 455
ELLK VLG+ G V+ K+ D L ++ + + + ++ + E + + +
Sbjct: 28 ELLK----VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H IV L + + + LI D++ G L T L K M + V + + +A
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKF-----YLAELA 137
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
L +LH ++ DLKP NILL ++DFGL++
Sbjct: 138 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------------------- 175
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+ + ++K+ S T Y APE + +Q D +S+GV++ EM+TG
Sbjct: 176 ESIDHEKKAYSFCGTVE---------YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A+R++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 55 VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 115 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 167 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 201
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 78 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 129
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 169
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 170 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 53/218 (24%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 103
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 104 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 156
Query: 540 LLGHNMEPHVSDFGLARLAN--IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597
+ + E + DFGLAR + +AG T
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMAGFVAT------------------------------- 185
Query: 598 LGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 186 --RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 47/237 (19%)
Query: 402 ELLKASAFVLGKSGIGIVY---KVVLEDGHTLAVRRLGEGGSQRFKE---FQTEVEAIGK 455
ELLK VLG+ G V+ K+ D L ++ + + + ++ + E + + +
Sbjct: 27 ELLK----VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H IV L + + + LI D++ G L T L K M + V + + +A
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKF-----YLAELA 136
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
L +LH ++ DLKP NILL ++DFGL++
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------------------- 174
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+ + ++K+ S T Y APE + +Q D +S+GV++ EM+TG
Sbjct: 175 ESIDHEKKAYSFCGTVE---------YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L+ L + T +P + + + +GL + H
Sbjct: 72 IHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 123
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 163
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 164 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 53/218 (24%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 103
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 104 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 156
Query: 540 LLGHNMEPHVSDFGLARLAN--IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597
+ + E + DFGLAR + +AG T
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMAGFVAT------------------------------- 185
Query: 598 LGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 186 --RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 47/237 (19%)
Query: 402 ELLKASAFVLGKSGIGIVY---KVVLEDGHTLAVRRLGEGGSQRFKE---FQTEVEAIGK 455
ELLK VLG+ G V+ K+ D L ++ + + + ++ + E + + +
Sbjct: 27 ELLK----VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H IV L + + + LI D++ G L T L K M + V + + +A
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKF-----YLAELA 136
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
L +LH ++ DLKP NILL ++DFGL++
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------------------- 174
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+ + ++K+ S T Y APE + +Q D +S+GV++ EM+TG
Sbjct: 175 ESIDHEKKAYSFCGTVE---------YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 37/137 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
++ + KGL Y+H +H DLKP N+ + + E + DFGLAR A+
Sbjct: 133 LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQAD---------- 179
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES-LKVVKPSQKWDIYSYGVILLE 628
+ + +Y+APE L ++ +Q DI+S G I+ E
Sbjct: 180 ---------------------SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 218
Query: 629 MITGRTAVVQVGSSEMD 645
MITG+T GS +D
Sbjct: 219 MITGKTLF--KGSDHLD 233
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 75 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 126
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 166
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 167 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 119 F------LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 119 F------LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 56/307 (18%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
VLG+ G V K D A++++ ++ +EV + + H +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 469 W----------SVDEKLLIY---DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+V +K ++ +Y NG+L +H + + W ++ + I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYW----RLFRQIL 126
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+ L Y+H + +H DLKP NI + + + DFGLA+ + + L S +P
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG- 182
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLK-VVKPSQKWDIYSYGVILLEMITGR 633
++ N +S +G+ Y A E L ++K D+YS G+I EMI
Sbjct: 183 --------------SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP- 227
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
S+ M+ VN + K L V + PD D + ++ KI + P
Sbjct: 228 ------FSTGMERVNIL-------KKLRSVSIEF-PPDFD-DNKMKVEKKIIRLLIDHDP 272
Query: 694 EKRPTMR 700
KRP R
Sbjct: 273 NKRPGAR 279
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 82/340 (24%)
Query: 389 LVPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQR 442
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 7 FVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 443 FK-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH---------- 491
+ EF E + ++V L L++ + + +G L + L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 492 GKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551
G+P P +++ IA G+ YL + KK+VH DL N ++ H+ + D
Sbjct: 123 GRP------PPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 552 FGLAR----LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES 607
FG+ R A G L R + APES
Sbjct: 174 FGMTRDIYETAYYRKGGKGLLPVR------------------------------WMAPES 203
Query: 608 LKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD-P 666
LK + D++S+GV+L E+ + Q S+E + L V+D
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLKFVMDGG 249
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
YL + E + ++++ C +P+ RPT I + L
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 53/218 (24%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 99
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 100 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 152
Query: 540 LLGHNMEPHVSDFGLARLAN--IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597
+ + E + DFGLAR + +AG T
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMAGFVAT------------------------------- 181
Query: 598 LGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 182 --RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVTLRAYY 468
LG G G V + + +D G +A+++ + S + +E + E++ + K+ H N+V+ R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 469 WSV------DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
+ D LL +Y G L L+ P +R ++ I+ L YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--IRT-LLSDISSALRYLH 139
Query: 523 EFSPKKYVHGDLKPSNILLG---HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
E + +H DLKP NI+L + + D G A+ E
Sbjct: 140 E---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----------------------E 174
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
Q + E T Y APE L+ K + D +S+G + E ITG
Sbjct: 175 LDQGELCTEFVGTLQ-------YLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 53/264 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTP--VPWSV 506
E++ + ++ H N++ A + +E ++ + G L+ + P W
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
V++ L ++H ++ +H D+KP+N+ + + D GL R
Sbjct: 142 FVQL----CSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRF--------- 185
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVI 625
TT + S +G+ YY +PE + + K DI+S G +
Sbjct: 186 --------------------FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIA 685
L EM ++ D +N LC K + P L D EE + ++
Sbjct: 226 LYEMAALQSPFYG------DKMNLYSLC----KKIEQCDYPPLPSDHYSEE----LRQLV 271
Query: 686 MACVHSSPEKRPTMRHISDALDRL 709
C++ PEKRP + ++ D R+
Sbjct: 272 NMCINPDPEKRPDVTYVYDVAKRM 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 78 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 129
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 169
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 170 EVVTL--------WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 56/307 (18%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ VV ++ T +A++ + E S R + EF E + + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHG-KPGMVS---FTPVPWSVRVKIIKGIAKGLV 519
L L+I + + G L + L +P M + P S +++ IA G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
YL+ K+VH DL N + + + DFG+ R
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR----------------------- 173
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639
+ L + +PESLK + D++S+GV+L E+ T Q
Sbjct: 174 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 230
Query: 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699
S+E L M+ + +K P PD +L++ C +P+ RP+
Sbjct: 231 LSNEQVLRFVMEGGLLDK--------PDNCPD--------MLLELMRMCWQYNPKMRPSF 274
Query: 700 RHISDAL 706
I ++
Sbjct: 275 LEIISSI 281
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 121
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 161
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 162 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 123
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 163
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 164 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 212
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 121
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 161
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 162 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVTLRAYY 468
LG G G V + + +D G +A+++ + S + +E + E++ + K+ H N+V+ R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 469 WSV------DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
+ D LL +Y G L L+ P +R ++ I+ L YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--IRT-LLSDISSALRYLH 138
Query: 523 EFSPKKYVHGDLKPSNILLG---HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
E + +H DLKP NI+L + + D G A+ E
Sbjct: 139 E---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----------------------E 173
Query: 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
Q + E T Y APE L+ K + D +S+G + E ITG
Sbjct: 174 LDQGELCTEFVGTLQ-------YLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 39/198 (19%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E+ + ++ H NIV L + ++ L+++++ + L + + T +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIK 106
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+ + +GL + H + +H DLKP N+L+ ++DFGLAR A G P
Sbjct: 107 SYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV-- 157
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILL 627
++ + EV T +Y+APE L K S DI+S G I
Sbjct: 158 --------------RTYTHEVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFA 195
Query: 628 EMITGRTAVVQVGSSEMD 645
EM+T R G SE+D
Sbjct: 196 EMVTRRALF--PGDSEID 211
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 39/198 (19%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E+ + ++ H NIV L + ++ L+++++ + L + + T +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIK 105
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+ + +GL + H + +H DLKP N+L+ ++DFGLAR A G P
Sbjct: 106 SYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV-- 156
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILL 627
++ + EV T +Y+APE L K S DI+S G I
Sbjct: 157 --------------RTYTHEVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 628 EMITGRTAVVQVGSSEMD 645
EM+T R G SE+D
Sbjct: 195 EMVTRRALF--PGDSEID 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR----------H 458
V+G+ +V + V GH AV+ + E ++R Q E R H
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVK-IMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 459 SNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
+I+TL Y S L++D + G L L K + I++ + + +
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE------KETRSIMRSLLEAV 213
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
+LH VH DLKP NILL NM+ +SDFG +
Sbjct: 214 SFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 121/314 (38%), Gaps = 70/314 (22%)
Query: 411 LGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVT 463
LG+ G+VY+ ++ + T +AV+ + E S R + EF E + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALH----------GKPGMVSFTPVPWSVRVKIIKG 513
L L++ + + +G L + L G+P P +++
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP------PPTLQEMIQMAAE 137
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
IA G+ YL + KK+VH DL N ++ H+ + DFG+ R
Sbjct: 138 IADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----------------- 177
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ L + APESLK + D++S+GV+L E+ +
Sbjct: 178 ---------DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 228
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD-PYLAPDADKEEEIIAVLKIAMACVHSS 692
Q S+E + L V+D YL + E + ++++ C +
Sbjct: 229 EQPYQGLSNE--------------QVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFN 271
Query: 693 PEKRPTMRHISDAL 706
P+ RPT I + L
Sbjct: 272 PKMRPTFLEIVNLL 285
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E++ + + IV ++S E + +++ GSL L +P +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK------EAKRIPEEILG 117
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
K+ + +GL YL E + +H D+KPSNIL+ E + DFG
Sbjct: 118 KVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFG--------------- 160
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSY-YQAPESLKVVKPSQKWDIYSYGVILL 627
VS ++ + ++S +G+ Y APE L+ S + DI+S G+ L+
Sbjct: 161 ----------------VSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 628 EMITGRTAVVQVGSSEMDLV 647
E+ GR + + E++ +
Sbjct: 205 ELAVGRYPIPPPDAKELEAI 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVTLRAY 467
+LG+ G+V + G +A++++ F E++ + +H NI+T+
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 468 YWSVDEKLLIYDYIPNGSLATALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ YI + T LH M+S + + I + + LH
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRAVKVLHG-- 130
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
+H DLKPSN+L+ N + V DFGLAR+ + + A+ + Q+S
Sbjct: 131 -SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA-----------ADNSEPTGQQSG 178
Query: 586 SLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGR 633
+E T +Y+APE L K S+ D++S G IL E+ R
Sbjct: 179 MVEFVATR-------WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 119 F------LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 410 VLGKSGIGIVYKV-VLEDGHTLAVRRLGEGGSQR---FKEFQTEVEAIGKIRHSNIVTLR 465
+LGK VY+ + G +A++ + + + + Q EV+ +++H +I+ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
Y+ + L+ + NG + L + P + + I G++YLH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNR-----VKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
+H DL SN+LL NM ++DFGLA
Sbjct: 133 ---ILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 176
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 177 -------------DEMTGYVAT--------RWYRAPEIMLNAMHYNQTVDIWSVGCIMAE 215
Query: 629 MITGRT 634
++TGRT
Sbjct: 216 LLTGRT 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 48/239 (20%)
Query: 411 LGKSGIGIVYKVVL------EDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVT 463
LG+ G VYK L E +A++ L + +E F+ E +++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 464 LRAYYWSVDEKL-LIYDYIPNGSLATAL-----HGKPGMVSFTPVPWSVR-----VKIIK 512
L + D+ L +I+ Y +G L L H G S V ++
Sbjct: 77 LLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 513 GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRM 572
IA G+ YL S VH DL N+L+ + +SD GL R A L ++ +
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 573 PAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
P + APE++ K S DI+SYGV+L E+ +
Sbjct: 193 PIR--------------------------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 121
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 161
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 162 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 124
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 164
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 165 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 213
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 75 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 126
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 166
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 167 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 125
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 165
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 166 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 214
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 112
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 113 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 39/229 (17%)
Query: 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKE--FQTEVEAIGKIRHSNIVTLR 465
+ +G G K+ + DG L + L G ++ +EV + +++H NIV R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 466 AYYWSVDEK----LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
Y +D ++ +Y G LA+ + + + +RV +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQ 581
+H DLKP+N+ L + DFGLAR+ N
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---------------------- 167
Query: 582 QKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEM 629
T+ + + +G+ YY +PE + + ++K DI+S G +L E+
Sbjct: 168 -------HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 74 IHTENKLYLVFEHV-DQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 125
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 165
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 166 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 74 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 125
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 165
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 166 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 214
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 73 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 124
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 164
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 165 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 48/239 (20%)
Query: 411 LGKSGIGIVYKVVL------EDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVT 463
LG+ G VYK L E +A++ L + +E F+ E +++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 464 LRAYYWSVDEKL-LIYDYIPNGSLATAL-----HGKPGMVSFTPVPWSVR-----VKIIK 512
L + D+ L +I+ Y +G L L H G S V ++
Sbjct: 94 LLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 513 GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRM 572
IA G+ YL S VH DL N+L+ + +SD GL R A L ++ +
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 573 PAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
P + APE++ K S DI+SYGV+L E+ +
Sbjct: 210 PIR--------------------------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 112
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 113 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 119 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 170
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 171 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 205
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 111 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 162
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 163 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 197
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 124
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 164
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 165 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++ +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYTH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 121
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 161
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 162 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L+++++ + L + + T +P + + + +GL + H
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFMDAS----ALTGIPLPLIKSYLFQLLQGLAFCHS---H 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 162
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 163 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 211
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 123
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 163
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 164 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 44/188 (23%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV + + H NI+ L ++ L+ + G L + + + F V +V
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR---MKFNEVDAAV-- 140
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLARLANIAGGSP 565
IIK + G+ YLH+ + VH DLKP N+LL + + DFGL S
Sbjct: 141 -IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGL---------SA 187
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGV 624
++ + K +ER LG+ YY APE L+ K +K D++S GV
Sbjct: 188 VFENQK----KMKER-----------------LGTAYYIAPEVLR-KKYDEKCDVWSIGV 225
Query: 625 ILLEMITG 632
IL ++ G
Sbjct: 226 ILFILLAG 233
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 123
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 163
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 164 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 212
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 400 LDELLKASAFVLGKSGIGIVYKVV-LEDGHTLAVR----RLGEGGSQRFKEFQTEVEAIG 454
+++ K ++ +LG+ V V L++G AV+ + G S+ F+E +T + G
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 455 KIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGI 514
+ NI+ L ++ L+++ + GS+ + + F S ++++ +
Sbjct: 70 ---NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK---HFNEREAS---RVVRDV 120
Query: 515 AKGLVYLHEFSPKKYVHGDLKPSNILLG--HNMEP-HVSDFGLARLANIAGGSPTLQSNR 571
A L +LH K H DLKP NIL + P + DF L G L ++
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDL-------GSGMKLNNSC 170
Query: 572 MPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPS-----QKWDIYSYGVIL 626
P P E+TT S+ Y APE ++V ++ D++S GV+L
Sbjct: 171 TPITTP----------ELTTPCGSAE----YMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
Query: 627 LEMITG 632
M++G
Sbjct: 217 YIMLSG 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 39/229 (17%)
Query: 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKE--FQTEVEAIGKIRHSNIVTLR 465
+ +G G K+ + DG L + L G ++ +EV + +++H NIV R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 466 AYYWSVDEK----LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
Y +D ++ +Y G LA+ + + + +RV +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQ 581
+H DLKP+N+ L + DFGLAR+ N
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---------------------- 167
Query: 582 QKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEM 629
T+ + + +G+ YY +PE + + ++K DI+S G +L E+
Sbjct: 168 -------HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 115 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXD 166
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 167 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 201
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR------------- 180
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
+ E+T ++ +Y+APE L + +Q DI+S G I+ E
Sbjct: 181 --------------HTADEMTGYVAT----RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 629 MITGRT 634
++TGRT
Sbjct: 223 LLTGRT 228
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+VYK + G +A++ RL E+ + ++ H NIV L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ ++ L++++ L L + T +P + + + +GL + H
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---H 123
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+ +H DLKP N+L+ ++DFGLAR A G P ++
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLAR----AFGVPV----------------RTYXH 163
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645
EV T +Y+APE L K S DI+S G I EM+T R G SE+D
Sbjct: 164 EVVTL--------WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEID 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 116 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 167
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 168 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 202
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 109 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 160
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 161 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 195
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 117 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 168
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 169 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 203
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 108 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 159
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 160 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 194
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 115 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 167 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 201
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR------------- 180
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
+ E+T ++ +Y+APE L + +Q DI+S G I+ E
Sbjct: 181 --------------HTADEMTGYVAT----RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 629 MITGRT 634
++TGRT
Sbjct: 223 LLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR------------- 180
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
+ E+T ++ +Y+APE L + +Q DI+S G I+ E
Sbjct: 181 --------------HTADEMTGYVAT----RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 222
Query: 629 MITGRT 634
++TGRT
Sbjct: 223 LLTGRT 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 109 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 160
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 161 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 195
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRFKEFQ-TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 115 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXD 166
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 167 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 201
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 44/188 (23%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV + ++ H NI+ L ++ L+ + G L + + F+ V +V
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ---KFSEVDAAV-- 108
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSP 565
I+K + G YLH+ + VH DLKP N+LL + + DFGL+ + G
Sbjct: 109 -IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--- 161
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGV 624
K +ER LG+ YY APE L+ K +K D++S GV
Sbjct: 162 ----------KMKER-----------------LGTAYYIAPEVLR-KKYDEKCDVWSCGV 193
Query: 625 ILLEMITG 632
IL ++ G
Sbjct: 194 ILYILLCG 201
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVAT- 190
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 191 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 219 AELLTGRT 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 111 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXD 162
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 163 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 197
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVAT- 190
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 191 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 219 AELLTGRT 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 131 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 182
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 183 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 217
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 111 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 162
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 163 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 197
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 113 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 164
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 165 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 199
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 37/228 (16%)
Query: 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKE--FQTEVEAIGKIRHSNIVTLR 465
+ +G G K+ + DG L + L G ++ +EV + +++H NIV R
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--R 69
Query: 466 AYYWSVDEK----LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
Y +D ++ +Y G LA+ + + + +RV +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQ 581
+H DLKP+N+ L + DFGLAR+ N
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---------------------H 168
Query: 582 QKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
+ + E T YY +PE + + ++K DI+S G +L E+
Sbjct: 169 DEDFAKEFVGT-------PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 141 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD---------- 187
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 188 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 226
Query: 629 MITGRT 634
++TGRT
Sbjct: 227 LLTGRT 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 103
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 104 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 156
Query: 540 LLGHNMEPHVSDFGLARLAN--IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597
+ + E + DFGLAR + + G T
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTGYVAT------------------------------- 185
Query: 598 LGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 186 --RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 115 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P + V T +Y+APE
Sbjct: 167 LKICDFGLARVAD-----------------PDHDHTGFLXEXVAT--------RWYRAPE 201
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 49/216 (22%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 113
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 114 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 166
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
+ + E + DFGLAR + ++ V T
Sbjct: 167 AVNEDCELKILDFGLARHTD-----------------------DEMTGYVAT-------- 195
Query: 600 SYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 116 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 167
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P + V T +Y+APE
Sbjct: 168 LKICDFGLARVAD-----------------PDHDHTGFLXEXVAT--------RWYRAPE 202
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+LG G V+K G LA + + G + +E + E+ + ++ H+N++ L +
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
S ++ +L+ +Y+ G L + + + T + + +K I +G+ ++H+
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDES--YNLTELD---TILFMKQICEGIRHMHQMY--- 207
Query: 529 YVHGDLKPSNILLGHNMEPHVS--DFGLAR 556
+H DLKP NIL + + DFGLAR
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 192
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 193 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 221 AELLTGRT 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 190
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 191 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 219 AELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 129 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 184
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 185 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 212
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 213 AELLTGRT 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 178
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 179 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 629 MITGRT 634
++TGRT
Sbjct: 218 LLTGRT 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 115 DLYKLLKCQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCD 166
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 167 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 201
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 31/229 (13%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVTLRAY 467
+LG+ G+V + G +A++++ F E++ + +H NI+T+
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 468 YWSVDEKLLIYDYIPNGSLATALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ YI + T LH M+S + + I + + LH
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRAVKVLHG-- 130
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
+H DLKPSN+L+ N + V DFGLAR+ + + N P QQ +
Sbjct: 131 -SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA-----DNSEPTG-----QQSGM 179
Query: 586 SLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGR 633
+ V T +Y+APE L K S+ D++S G IL E+ R
Sbjct: 180 TEXVAT--------RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 176
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 177 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 629 MITGRT 634
++TGRT
Sbjct: 216 LLTGRT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 178
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 179 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 629 MITGRT 634
++TGRT
Sbjct: 218 LLTGRT 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQ---RFKEFQTEVEAIGKIRHSNIVTLRA 466
+G G VY + + +A++++ G Q ++++ EV + K+RH N + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 467 YYWSVDEKLLIYDY-IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
Y L+ +Y + + S +H KP V + + G +GL YLH +
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAA---VTHGALQGLAYLHSHN 174
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARL---ANIAGGSP 565
+H D+K NILL + DFG A + AN G+P
Sbjct: 175 ---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 214
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 142 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 188
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 189 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 227
Query: 629 MITGRT 634
++TGRT
Sbjct: 228 LLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 142 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 188
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 189 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 227
Query: 629 MITGRT 634
++TGRT
Sbjct: 228 LLTGRT 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 123
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 124 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 176
Query: 540 LLGHNMEPHVSDFGLARLAN--IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597
+ + E + DFGLAR + + G T
Sbjct: 177 AVNEDCELKILDFGLARHTDDEMXGXVAT------------------------------- 205
Query: 598 LGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 206 --RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 142 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 188
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 189 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 227
Query: 629 MITGRT 634
++TGRT
Sbjct: 228 LLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 191
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 192 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 220 AELLTGRT 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 178
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 179 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 629 MITGRT 634
++TGRT
Sbjct: 218 LLTGRT 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 172
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 173 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 629 MITGRT 634
++TGRT
Sbjct: 212 LLTGRT 217
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 111 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXD 162
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 163 LKICDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 197
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 127 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 173
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 174 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 212
Query: 629 MITGRT 634
++TGRT
Sbjct: 213 LLTGRT 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 150 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 196
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 197 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 235
Query: 629 MITGRT 634
++TGRT
Sbjct: 236 LLTGRT 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 49/216 (22%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYYW---SVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 99
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 100 ----LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 152
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
+ + E + DFGLAR ++ V T
Sbjct: 153 AVNEDCELKILDFGLAR-----------------------HTDDEMTGYVAT-------- 181
Query: 600 SYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 127 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 173
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 174 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 212
Query: 629 MITGRT 634
++TGRT
Sbjct: 213 LLTGRT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 190
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 191 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 219 AELLTGRT 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 430 LAVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++++ Q + + E++ + + RH NI+ + + + + YI + T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 489 ALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
L+ K +S + + + I +GL Y+H +H DLKPSN+LL +
Sbjct: 111 DLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXD 162
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+ DFGLAR+A+ P ++ V T +Y+APE
Sbjct: 163 LKIXDFGLARVAD-----------------PDHDHTGFLTEYVAT--------RWYRAPE 197
Query: 607 SLKVVKPSQK-WDIYSYGVILLEMITGR 633
+ K K DI+S G IL EM++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 128 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 174
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 175 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 629 MITGRT 634
++TGRT
Sbjct: 214 LLTGRT 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 149 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 195
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 196 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 234
Query: 629 MITGRT 634
++TGRT
Sbjct: 235 LLTGRT 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 153 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 199
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 200 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 238
Query: 629 MITGRT 634
++TGRT
Sbjct: 239 LLTGRT 244
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 153 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVAT- 208
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 209 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 237 AELLTGRT 244
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 55/225 (24%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV + ++ H NI+ L ++ L+ + G L + + F+ V +V
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ---KFSEVDAAV-- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSP 565
I+K + G YLH+ + VH DLKP N+LL + + DFGL+ + G
Sbjct: 126 -IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--- 178
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGV 624
K +ER LG+ YY APE L+ K +K D++S GV
Sbjct: 179 ----------KMKER-----------------LGTAYYIAPEVLR-KKYDEKCDVWSCGV 210
Query: 625 ILLEMITGR-----------TAVVQVGSSEMDLVNWMQLCIEEKK 658
IL ++ G V+ G D +W Q+ E K+
Sbjct: 211 ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 172
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 173 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 629 MITGRT 634
++TGRT
Sbjct: 212 LLTGRT 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 49/216 (22%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 122
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 123 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 175
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
+ + E + DFGLAR + ++ V T
Sbjct: 176 AVNEDCELKILDFGLARHTD-----------------------DEMTGYVAT-------- 204
Query: 600 SYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 141 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 187
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 188 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 226
Query: 629 MITGRT 634
++TGRT
Sbjct: 227 LLTGRT 232
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 399 DLDELLKASAF--VLGKSGIGIVYKVV-LEDGHTLAVRRLGEG--GSQRFKEFQTEVEAI 453
D DELLK +G G V + G +A++ + + GS +TE+EA+
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD-LPRIKTEIEAL 62
Query: 454 GKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG 513
+RH +I L + ++ ++ +Y P G L + + + RV + +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-----ETRV-VFRQ 116
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
I + Y+H + Y H DLKP N+L + + DFGL
Sbjct: 117 IVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLC 155
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD---------- 178
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 179 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 217
Query: 629 MITGRT 634
++TGRT
Sbjct: 218 LLTGRT 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 19/105 (18%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSN+L+ N + V DFGLAR+ + + A+ + Q+S E
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESA-----------ADNSEPTGQQSGMTEY 182
Query: 590 TTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGR 633
T +Y+APE L K S+ D++S G IL E+ R
Sbjct: 183 VATR-------WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 49/216 (22%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 123
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 124 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 176
Query: 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLG 599
+ + E + DFGLAR + ++ V T
Sbjct: 177 AVNEDCELKILDFGLARHTD-----------------------DEMTGYVAT-------- 205
Query: 600 SYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVAT- 191
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 192 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 220 AELLTGRT 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQ---RFKEFQTEVEAIGKIRHSNIVTLRA 466
+G G VY + + +A++++ G Q ++++ EV + K+RH N + R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 467 YYWSVDEKLLIYDY-IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
Y L+ +Y + + S +H KP V + + G +GL YLH +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAA---VTHGALQGLAYLHSHN 135
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARL---ANIAGGSP 565
+H D+K NILL + DFG A + AN G+P
Sbjct: 136 ---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 44/249 (17%)
Query: 410 VLGKSGIGIVYKVVL--EDGH--TLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVT 463
+LGK G V + L EDG +AV+ L S +EF E + + H ++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 464 LRAYYWSVDEK------LLIYDYIPNGSL-ATALHGKPGMVSFTPVPWSVRVKIIKGIAK 516
L K ++I ++ +G L A L + G F +P V+ + IA
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN-LPLQTLVRFMVDIAC 148
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ YL S + ++H DL N +L +M V+DFGL+R
Sbjct: 149 GMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR-------------------- 185
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635
K S + +S L + A ESL + D++++GV + E++T G+T
Sbjct: 186 ------KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
Query: 636 VVQVGSSEM 644
+ ++E+
Sbjct: 240 YAGIENAEI 248
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ + EV + +I+H N++TL Y + + +LI + + G L L K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE----- 113
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLA 555
+ +K I G+ YLH + H DLKP NI+L P + DFGLA
Sbjct: 114 -EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VYK ++ LA ++ + S+ +++ E++ + H NIV L ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+ ++ ++ G++ + + P+ S + K L YLH+ K
Sbjct: 105 YENNLWILIEFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHD---NKI 156
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK NIL + + ++DFG++ A + T+Q P ++ EV
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPY-----WMAPEV 206
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
+S + Y+A D++S G+ L+EM
Sbjct: 207 VMCETSKDRPYDYKA-------------DVWSLGITLIEM 233
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 58/220 (26%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEA---------IGKIRHSNIVTLRAYYWSVDEKLLI 477
G +A+++L + FQ+E+ A + ++H N++ L +
Sbjct: 67 GEKVAIKKLS-------RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119
Query: 478 YD-YIPNGSLATALHGKPGM-VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
YD Y+ + T L GM S + + ++ + KGL Y+H VH DLK
Sbjct: 120 YDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSAG---VVHRDLK 171
Query: 536 PSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSS 595
P N+ + + E + DFGLAR A+ +
Sbjct: 172 PGNLAVNEDCELKILDFGLARHAD-------------------------------AEMTG 200
Query: 596 SNLGSYYQAPES-LKVVKPSQKWDIYSYGVILLEMITGRT 634
+ +Y+APE L + +Q DI+S G I+ EM+TG+T
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 401 DELLKASAFVLGKS-GIGIVYKVVLED----GHTLAVRRLGEGGSQRFK---EFQTEVEA 452
D +K +VLG + G+G KV + + GH +AV+ L + + + E++
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 453 IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSVRVKI 510
+ RH +I+ L + + ++ +Y+ G L + HG+ V ++
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--------VEEMEARRL 116
Query: 511 IKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559
+ I + Y H VH DLKP N+LL +M ++DFGL+ + +
Sbjct: 117 FQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR + + G T
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT- 191
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 192 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 220 AELLTGRT 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 43/171 (25%)
Query: 467 YYWSV--DEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
YY S D KL +I +Y+ GS L +PG + T + I++ I KGL YLH
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQI-----ATILREILKGLDYLHS 142
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
+K +H D+K +N+LL + E ++DFG+A
Sbjct: 143 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAG--------------------------- 172
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
L T ++ +G+ ++ APE +K K DI+S G+ +E+ G
Sbjct: 173 --QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 401 DELLKASAFVLGKS-GIGIVYKVVLED----GHTLAVRRLGEGGSQRFK---EFQTEVEA 452
D +K +VLG + G+G KV + + GH +AV+ L + + + E++
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 453 IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSVRVKI 510
+ RH +I+ L + + ++ +Y+ G L + HG+ V ++
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--------VEEMEARRL 116
Query: 511 IKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559
+ I + Y H VH DLKP N+LL +M ++DFGL+ + +
Sbjct: 117 FQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 130/335 (38%), Gaps = 74/335 (22%)
Query: 390 VPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRF 443
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 9 VPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 64
Query: 444 K-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH----------G 492
+ EF E + ++V L L++ + + +G L + L G
Sbjct: 65 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 124
Query: 493 KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552
+P P +++ IA G+ YL + KK+VH +L N ++ H+ + DF
Sbjct: 125 RP------PPTLQEMIQMAAEIADGMAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDF 175
Query: 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK 612
G+ R + L + APESLK
Sbjct: 176 GMTR--------------------------DIYETDYYRKGGKGLLPVRWMAPESLKDGV 209
Query: 613 PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD-PYLAPD 671
+ D++S+GV+L E+ + Q S+E + L V+D YL
Sbjct: 210 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLKFVMDGGYLDQP 255
Query: 672 ADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+ E + ++++ C +P RPT I + L
Sbjct: 256 DNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLL 287
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I +GL Y+H +H DLKPSN+LL + + DFGLAR+A+
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------- 177
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVILLEMITG 632
P ++ V T +Y+APE + K K DI+S G IL EM++
Sbjct: 178 ---PDHDHTGFLTEYVAT--------RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 633 R 633
R
Sbjct: 227 R 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I +GL Y+H +H DLKPSN+LL + + DFGLAR+A+
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD-------------- 195
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVILLEMITG 632
P ++ V T +Y+APE + K K DI+S G IL EM++
Sbjct: 196 ---PDHDHTGFLTEYVAT--------RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 633 R 633
R
Sbjct: 245 R 245
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 43/167 (25%)
Query: 486 LATALHGKPGMVSFTP---VPWSVRVKIIKGIAKGLVYLHEFSPK-------KYVHGDLK 535
L TA H K + F V W+ I + +A+GL YLHE P H D+K
Sbjct: 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158
Query: 536 PSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSS 595
N+LL +N+ ++DFGLA L AG S ++
Sbjct: 159 SKNVLLKNNLTACIADFGLA-LKFEAGKS--------------------------AGDTH 191
Query: 596 SNLGS-YYQAPESLKVVKPSQ-----KWDIYSYGVILLEMITGRTAV 636
+G+ Y APE L+ Q + D+Y+ G++L E+ + TA
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 182
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 183 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 629 MITGRT 634
++TGRT
Sbjct: 222 LLTGRT 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 76/334 (22%)
Query: 399 DLDELLKASAFVL-GKSGIGIVYKVVLEDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI 456
+ +++KA+AF L G++G T+AV+ L E S ++ +E + ++
Sbjct: 35 EFGKVVKATAFHLKGRAGYT-----------TVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK----PGMVSFT------------ 500
H +++ L LLI +Y GSL L PG +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 501 --PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
+ + I++G+ YL E K VH DL NIL+ + +SDFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWD 618
R+P + + A ESL + + D
Sbjct: 201 YEEDSXVKRSQGRIPVK--------------------------WMAIESLFDHIYTTQSD 234
Query: 619 IYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI 678
++S+GV+L E++T G L N ++ ++ PD EE
Sbjct: 235 VWSFGVLLWEIVT-LGGNPYPGIPPERLFNLLKTGHRMER-----------PDNCSEE-- 280
Query: 679 IAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712
+ ++ + C P+KRP IS L++++V
Sbjct: 281 --MYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 130/335 (38%), Gaps = 74/335 (22%)
Query: 390 VPLDTQVAFDLDELLKASAFVLGKSGIGIVYK-----VVLEDGHT-LAVRRLGEGGSQRF 443
VP + +V+ + LL+ LG+ G+VY+ ++ + T +AV+ + E S R
Sbjct: 8 VPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 444 K-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH----------G 492
+ EF E + ++V L L++ + + +G L + L G
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 493 KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552
+P P +++ IA G+ YL + KK+VH +L N ++ H+ + DF
Sbjct: 124 RP------PPTLQEMIQMAAEIADGMAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDF 174
Query: 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK 612
G+ R + L + APESLK
Sbjct: 175 GMTR--------------------------DIYETDYYRKGGKGLLPVRWMAPESLKDGV 208
Query: 613 PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLD-PYLAPD 671
+ D++S+GV+L E+ + Q S+E + L V+D YL
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------------QVLKFVMDGGYLDQP 254
Query: 672 ADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706
+ E + ++++ C +P RPT I + L
Sbjct: 255 DNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 36/138 (26%)
Query: 501 PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560
P+P + K+ I K L YL E +H D+KPSNILL + + DFG+
Sbjct: 120 PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGI------ 171
Query: 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQ----- 615
S R+ +K ++R + Y APE + P++
Sbjct: 172 --------SGRLVDDKAKDRSAGCAA---------------YMAPERIDPPDPTKPDYDI 208
Query: 616 KWDIYSYGVILLEMITGR 633
+ D++S G+ L+E+ TG+
Sbjct: 209 RADVWSLGISLVELATGQ 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 100/249 (40%), Gaps = 58/249 (23%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
+++ A+A+ + K+G+ I +AV+ L E +E +E++ + ++ H
Sbjct: 60 KVMNATAYGISKTGVSI----------QVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIK------- 512
NIV L LI++Y G L L K S + + + ++ +
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 513 ----------GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562
+AKG+ +L EF K VH DL N+L+ H + DFGLAR
Sbjct: 170 TFEDLLCFAYQVAKGMEFL-EF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622
+ R+P + + APESL + K D++SY
Sbjct: 227 NYVVRGNARLPVK--------------------------WMAPESLFEGIYTIKSDVWSY 260
Query: 623 GVILLEMIT 631
G++L E+ +
Sbjct: 261 GILLWEIFS 269
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I +GL Y+H +H DLKPSN+LL + + DFGLAR+A+
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD-------------- 177
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVILLEMITG 632
P ++ V T +Y+APE + K K DI+S G IL EM++
Sbjct: 178 ---PDHDHTGFLTEYVAT--------RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 633 R 633
R
Sbjct: 227 R 227
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 43/171 (25%)
Query: 467 YYWSV--DEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
YY S D KL +I +Y+ GS L +PG + T + I++ I KGL YLH
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQI-----ATILREILKGLDYLHS 122
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
+K +H D+K +N+LL + E ++DFG+A
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAG--------------------------- 152
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
L T ++ +G+ ++ APE +K K DI+S G+ +E+ G
Sbjct: 153 --QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 401 DELLKASAFVLGKS-GIGIVYKVVLED----GHTLAVRRLGEGGSQRFK---EFQTEVEA 452
D +K ++LG + G+G KV + GH +AV+ L + + + E++
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN 69
Query: 453 IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIK 512
+ RH +I+ L + + ++ +Y+ G L + K G + ++ +
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKE-----SRRLFQ 123
Query: 513 GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
I G+ Y H VH DLKP N+LL +M ++DFGL+ +
Sbjct: 124 QILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 165
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 127/333 (38%), Gaps = 76/333 (22%)
Query: 399 DLDELLKASAFVL-GKSGIGIVYKVVLEDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI 456
+ +++KA+AF L G++G T+AV+ L E S ++ +E + ++
Sbjct: 35 EFGKVVKATAFHLKGRAGYT-----------TVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK----PGMVSFT------------ 500
H +++ L LLI +Y GSL L PG +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 501 --PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
+ + I++G+ YL E S VH DL NIL+ + +SDFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWD 618
R+P + + A ESL + + D
Sbjct: 201 YEEDSXVKRSQGRIPVK--------------------------WMAIESLFDHIYTTQSD 234
Query: 619 IYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI 678
++S+GV+L E++T G L N ++ ++ PD EE
Sbjct: 235 VWSFGVLLWEIVT-LGGNPYPGIPPERLFNLLKTGHRMER-----------PDNCSEE-- 280
Query: 679 IAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711
+ ++ + C P+KRP IS L++++V
Sbjct: 281 --MYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + K +H DL NILL H + DFGLAR + R+P
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + APES+ + + D++SYG+ L E+ +
Sbjct: 234 VK--------------------------WMAPESIFNCVYTFESDVWSYGIFLWELFS-- 265
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
+GSS + + K +L P AP E+ ++K C + P
Sbjct: 266 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMK---TCWDADP 312
Query: 694 EKRPTMRHISDALDRLIVSS 713
KRPT + I +++ I S
Sbjct: 313 LKRPTFKQIVQLIEKQISES 332
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 41/232 (17%)
Query: 403 LLKASAFVLGKSGIGIV-YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNI 461
LL S +G+ GIV G +AV+ + QR + EV + +H N+
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 462 VTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
V + Y +E ++ +++ G+L +VS + + + + + L YL
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALT-------DIVSQVRLNEEQIATVCEAVLQALAYL 157
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQ 581
H + +H D+K +ILL + +SDFG A I+ P
Sbjct: 158 H---AQGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVP---------------- 196
Query: 582 QKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+G+ Y+ APE + + + DI+S G++++EM+ G
Sbjct: 197 -----------KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 58/273 (21%)
Query: 410 VLGKSGIGIVYKV---VLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRA 466
+LGK G V K + + + + V ++ EVE + K+ H NI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ + G L + + +IIK + G+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA------RIIKQVFSGITYMHKHN- 141
Query: 527 KKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
VH DLKP NILL + + + DFGL S Q N
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGL---------STCFQQN------------- 177
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR--------- 633
T +G+ YY APE L+ +K D++S GVIL +++G
Sbjct: 178 --------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
Query: 634 --TAVVQVGSSEMDLVNWMQLCIEEKKPLADVL 664
V+ G DL W + + K + +L
Sbjct: 229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + K +H DL NILL H + DFGLAR + R+P
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + APES+ + + D++SYG+ L E+ +
Sbjct: 211 VK--------------------------WMAPESIFNCVYTFESDVWSYGIFLWELFS-- 242
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
+GSS + + K +L P AP E+ ++K C + P
Sbjct: 243 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMK---TCWDADP 289
Query: 694 EKRPTMRHISDALDRLIVSS 713
KRPT + I +++ I S
Sbjct: 290 LKRPTFKQIVQLIEKQISES 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 76/334 (22%)
Query: 399 DLDELLKASAFVL-GKSGIGIVYKVVLEDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI 456
+ +++KA+AF L G++G T+AV+ L E S ++ +E + ++
Sbjct: 35 EFGKVVKATAFHLKGRAGYT-----------TVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK----PGMVSFT------------ 500
H +++ L LLI +Y GSL L PG +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 501 --PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
+ + I++G+ YL E K VH DL NIL+ + +SDFGL+R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWD 618
R+P + + A ESL + + D
Sbjct: 201 YEEDSYVKRSQGRIPVK--------------------------WMAIESLFDHIYTTQSD 234
Query: 619 IYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI 678
++S+GV+L E++T G L N ++ ++ PD EE
Sbjct: 235 VWSFGVLLWEIVT-LGGNPYPGIPPERLFNLLKTGHRMER-----------PDNCSEE-- 280
Query: 679 IAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712
+ ++ + C P+KRP IS L++++V
Sbjct: 281 --MYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 46/198 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+A+G+ +L S +K +H DL NILL N + DFGLAR R+P
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632
+ + APES+ S K D++SYGV+L E+ + G
Sbjct: 265 LK--------------------------WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLG 298
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V E D + ++ + + P Y P+ + +I + C H
Sbjct: 299 GSPYPGVQMDE-DFCSRLREGMRMRAP------EYSTPE---------IYQIMLDCWHRD 342
Query: 693 PEKRPTMRHISDALDRLI 710
P++RP + + L L+
Sbjct: 343 PKERPRFAELVEKLGDLL 360
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 411 LGKSGIGIVYKVVLEDGH-TLAVRRLGEGGSQRF---KEFQTEVEAIGKIRHSNIVTLRA 466
LGK G VY + H +A++ L + ++ + + E+E + H NI+ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
Y++ LI +Y P G L L +F I++ +A L+Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS---CTFDE---QRTATIMEELADALMYCH---G 141
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFG 553
KK +H D+KP N+LLG E ++DFG
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + K +H DL NILL H + DFGLAR + R+P
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + APES+ + + D++SYG+ L E+ +
Sbjct: 234 VK--------------------------WMAPESIFNCVYTFESDVWSYGIFLWELFS-- 265
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
+GSS + + K +L P AP E+ ++K C + P
Sbjct: 266 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMK---TCWDADP 312
Query: 694 EKRPTMRHISDALDRLIVSS 713
KRPT + I +++ I S
Sbjct: 313 LKRPTFKQIVQLIEKQISES 332
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 126 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 177 HXVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 624 VILLEMIT 631
V L EM T
Sbjct: 212 VTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 116 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 167 HXVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 624 VILLEMIT 631
V L EM T
Sbjct: 202 VTLWEMFT 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSXQEYSDWKE 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + D+GLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 44/200 (22%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + K +H DL NILL H + DFGLAR + R+P
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + APES+ + + D++SYG+ L E+ +
Sbjct: 229 VK--------------------------WMAPESIFNCVYTFESDVWSYGIFLWELFS-- 260
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
+GSS + + K +L P AP E+ ++K C + P
Sbjct: 261 -----LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMK---TCWDADP 307
Query: 694 EKRPTMRHISDALDRLIVSS 713
KRPT + I +++ I S
Sbjct: 308 LKRPTFKQIVQLIEKQISES 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 50/203 (24%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + K +H DL NILL H + DFGLAR + R+P
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + APES+ + + D++SYG+ L E+ +
Sbjct: 227 VK--------------------------WMAPESIFNCVYTFESDVWSYGIFLWELFS-- 258
Query: 634 TAVVQVGSSE---MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVH 690
+GSS M + + I+E +L P AP E+ ++K C
Sbjct: 259 -----LGSSPYPGMPVDSKFYKMIKEG---FRMLSPEHAP-----AEMYDIMK---TCWD 302
Query: 691 SSPEKRPTMRHISDALDRLIVSS 713
+ P KRPT + I +++ I S
Sbjct: 303 ADPLKRPTFKQIVQLIEKQISES 325
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 43/171 (25%)
Query: 467 YYWSV--DEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
YY S D KL +I +Y+ GS L +PG + T + I++ I KGL YLH
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQI-----ATILREILKGLDYLHS 137
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
+K +H D+K +N+LL + E ++DFG+A
Sbjct: 138 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAG--------------------------- 167
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
L T + +G+ ++ APE +K K DI+S G+ +E+ G
Sbjct: 168 --QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 415 GIGIVYKVVLED----GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
G G +VVL + G AV+ + + + + + E+ + KI+H NIV L Y
Sbjct: 31 GTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYE 90
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
S + L+ + G L + K G +T S +I+ + + YLH
Sbjct: 91 SPNHLYLVMQLVSGGELFDRIVEK-GF--YTEKDAST---LIRQVLDAVYYLHRMG---I 141
Query: 530 VHGDLKPSNILLGHNMEPH---VSDFGLARLA------NIAGGSPTLQSNRMPAEKP 577
VH DLKP N+L E +SDFGL+++ + A G+P + + A+KP
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 436 GEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPG 495
G S+ F+E + + G H N++ L ++ D L+++ + GS+ + +H +
Sbjct: 51 GHIRSRVFREVEMLYQCQG---HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR- 106
Query: 496 MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH--NMEP-HVSDF 552
F + SV +++ +A L +LH K H DLKP NIL H + P + DF
Sbjct: 107 --HFNELEASV---VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDF 158
Query: 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK 612
GL G L + P P E+ T S+ Y APE ++
Sbjct: 159 GL-------GSGIKLNGDCSPISTP----------ELLTPCGSAE----YMAPEVVEAFS 197
Query: 613 PS-----QKWDIYSYGVILLEMITG 632
++ D++S GVIL +++G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 46/227 (20%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLG----EGGSQRFKEFQTEVEAIGKIRHSNIVTLRA 466
+GK G VYK + D HT V + E ++ Q E+ + + I
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
Y + +I +Y+ GS L KPG P+ + I++ I KGL YLH
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL--KPG-----PLEETYIATILREILKGLDYLHS--- 134
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
++ +H D+K +N+LL + ++DFG +AG
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFG------VAG-----------------------Q 165
Query: 587 LEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
L T + +G+ ++ APE +K K DI+S G+ +E+ G
Sbjct: 166 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
++ + KGL Y+H VH DLKP N+ + + E + DFGLAR A+
Sbjct: 131 LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD---------- 177
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPES-LKVVKPSQKWDIYSYGVILLE 628
+ + +Y+APE L + +Q DI+S G I+ E
Sbjct: 178 ---------------------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 216
Query: 629 MITGRT 634
M+TG+T
Sbjct: 217 MLTGKT 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 124/307 (40%), Gaps = 56/307 (18%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
VLG+ G V K D A++++ ++ +EV + + H +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 469 W----------SVDEKLLIY---DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+V +K ++ +Y N +L +H + + W ++ + I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDEYW----RLFRQIL 126
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+ L Y+H + +H DLKP NI + + + DFGLA+ + + L S +P
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG- 182
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLK-VVKPSQKWDIYSYGVILLEMITGR 633
++ N +S +G+ Y A E L ++K D+YS G+I EMI
Sbjct: 183 --------------SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP- 227
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
S+ M+ VN + K L V + PD D + ++ KI + P
Sbjct: 228 ------FSTGMERVNIL-------KKLRSVSIEF-PPDFD-DNKMKVEKKIIRLLIDHDP 272
Query: 694 EKRPTMR 700
KRP R
Sbjct: 273 NKRPGAR 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 415 GIGIVYKVVL-EDGHT---LAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
G G +V+L ED T +A++ + E + + E+ + KI+H NIV L Y
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
S LI + G L + K G + ++I + + YLH+
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEK-GFYTERDAS-----RLIFQVLDAVKYLHDLG---I 137
Query: 530 VHGDLKPSNIL---LGHNMEPHVSDFGLARLAN------IAGGSPTLQSNRMPAEKP 577
VH DLKP N+L L + + +SDFGL+++ + A G+P + + A+KP
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 58/273 (21%)
Query: 410 VLGKSGIGIVYKV---VLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRA 466
+LGK G V K + + + + V ++ EVE + K+ H NI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ + G L + + +IIK + G+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA------RIIKQVFSGITYMHKHN- 141
Query: 527 KKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
VH DLKP NILL + + + DFGL S Q N
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGL---------STCFQQN------------- 177
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR--------- 633
T +G+ YY APE L+ +K D++S GVIL +++G
Sbjct: 178 --------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
Query: 634 --TAVVQVGSSEMDLVNWMQLCIEEKKPLADVL 664
V+ G DL W + + K + +L
Sbjct: 229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 58/273 (21%)
Query: 410 VLGKSGIGIVYKV---VLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRA 466
+LGK G V K + + + + V ++ EVE + K+ H NI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ + G L + + +IIK + G+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA------RIIKQVFSGITYMHKHN- 141
Query: 527 KKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
VH DLKP NILL + + + DFGL S Q N
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGL---------STCFQQN------------- 177
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR--------- 633
T +G+ YY APE L+ +K D++S GVIL +++G
Sbjct: 178 --------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
Query: 634 --TAVVQVGSSEMDLVNWMQLCIEEKKPLADVL 664
V+ G DL W + + K + +L
Sbjct: 229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYT- 138
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 139 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 183
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ S T + Y +PE L S+ D+++ G I+
Sbjct: 184 ---------PESKQARANSFVGT---------AQYVSPELLTEKSASKSSDLWALGCIIY 225
Query: 628 EMITG 632
+++ G
Sbjct: 226 QLVAG 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 49/239 (20%)
Query: 402 ELLKASAFVLGKSGIGIVYKVV----LEDGHTLAVRRLGEG----GSQRFKEFQTEVEAI 453
ELL+ VLGK G G V++V G A++ L + ++ + E +
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 454 GKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG 513
+++H IV L + + + LI +Y+ G L L + + T + +
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY------LAE 129
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I+ L +LH+ K ++ DLKP NI+L H ++DFGL + +I G+
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT--------- 176
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
VT T + Y APE L ++ D +S G ++ +M+TG
Sbjct: 177 ---------------VTHTFCGT---IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 43/171 (25%)
Query: 467 YYWSV--DEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
YY S D KL +I +Y+ GS L +PG + T + I++ I KGL YLH
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQI-----ATILREILKGLDYLHS 122
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
+K +H D+K +N+LL + E ++DFG+A
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAG--------------------------- 152
Query: 584 SVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
L T + +G+ ++ APE +K K DI+S G+ +E+ G
Sbjct: 153 --QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 28/119 (23%)
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+GL Y+H + +H DLKPSN+L+ N E + DFG+AR + PAE
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS-----------PAE 215
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGR 633
Q ++ V T +Y+APE L + + +Q D++S G I EM+ R
Sbjct: 216 -----HQYFMTEYVAT--------RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 28/119 (23%)
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+GL Y+H + +H DLKPSN+L+ N E + DFG+AR G T PAE
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR------GLCT-----SPAE 214
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGR 633
Q ++ V T +Y+APE L + + +Q D++S G I EM+ R
Sbjct: 215 -----HQYFMTEYVAT--------RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 415 GIGIVYKVVL-EDGHT---LAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
G G +V+L ED T +A++ + E + + E+ + KI+H NIV L Y
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
S LI + G L + K G + ++I + + YLH+
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEK-GFYTERDAS-----RLIFQVLDAVKYLHDLG---I 137
Query: 530 VHGDLKPSNIL---LGHNMEPHVSDFGLARLAN------IAGGSPTLQSNRMPAEKP 577
VH DLKP N+L L + + +SDFGL+++ + A G+P + + A+KP
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 120 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 171 HYVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 624 VILLEMIT 631
V L EM T
Sbjct: 206 VTLWEMFT 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 32/220 (14%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VYK ++ LA ++ + S+ +++ E++ + H NIV L ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+ ++ ++ G++ + + P+ S + K L YLH+ K
Sbjct: 105 YENNLWILIEFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHD---NKI 156
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK NIL + + ++DFG++ A + +Q P ++ EV
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPY-----WMAPEV 206
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
+S + Y+A D++S G+ L+EM
Sbjct: 207 VMCETSKDRPYDYKA-------------DVWSLGITLIEM 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 415 GIGIVYKVVL-EDGHT---LAVRRLG-EGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
G G +V+L ED T +A++ + E + + E+ + KI+H NIV L Y
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 86
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
S LI + G L + K G + ++I + + YLH+
Sbjct: 87 SGGHLYLIMQLVSGGELFDRIVEK-GFYTERDAS-----RLIFQVLDAVKYLHDLG---I 137
Query: 530 VHGDLKPSNIL---LGHNMEPHVSDFGLARLAN------IAGGSPTLQSNRMPAEKP 577
VH DLKP N+L L + + +SDFGL+++ + A G+P + + A+KP
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 51/263 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 126 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 177 HYVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 624 VILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLK 683
V L EM T G +N Q+ + K + P P +
Sbjct: 212 VTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ--------DIYN 256
Query: 684 IAMACVHSSPEKRPTMRHISDAL 706
+ + C PE RPT + D L
Sbjct: 257 VMVQCWAHKPEDRPTFVALRDFL 279
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 51/263 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 120 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 171 HYVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 624 VILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLK 683
V L EM T G +N Q+ + K + P P +
Sbjct: 206 VTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ--------DIYN 250
Query: 684 IAMACVHSSPEKRPTMRHISDAL 706
+ + C PE RPT + D L
Sbjct: 251 VMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 116 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 167 HYVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 624 VILLEMIT 631
V L EM T
Sbjct: 202 VTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSF-TPVP 503
+F EV A+ + H N++ L + K+ + + P GSL L G T
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
++V+V A+G+ YL K+++H DL N+LL + DFGL R
Sbjct: 116 YAVQV------AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
+Q +R + + APESLK S D + +G
Sbjct: 167 HYVMQEHR-------------------------KVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 624 VILLEMIT 631
V L EM T
Sbjct: 202 VTLWEMFT 209
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGL R +
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD---------- 176
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 177 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 629 MITGRT 634
++TGRT
Sbjct: 216 LLTGRT 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 41/192 (21%)
Query: 447 QTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
Q E+ A+ H NIV L + L+ + + G L + K F+ S
Sbjct: 53 QKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK---HFSETEAS 109
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAG 562
I++ + + ++H+ VH DLKP N+L N+E + DFG ARL
Sbjct: 110 Y---IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLK---- 159
Query: 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622
P Q + P +Y APE L + D++S
Sbjct: 160 -PPDNQPLKTPC-----------------------FTLHYAAPELLNQNGYDESCDLWSL 195
Query: 623 GVILLEMITGRT 634
GVIL M++G+
Sbjct: 196 GVILYTMLSGQV 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 36/207 (17%)
Query: 446 FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
+ E+ + H N+V + + + L +Y G L + GM P P +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDA 106
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
R + G+VYLH H D+KP N+LL +SDFGLA +
Sbjct: 107 QR--FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGV 624
L N+M P Y APE LK + ++ D++S G+
Sbjct: 162 LL--NKMXGTLP------------------------YVAPELLKRREFHAEPVDVWSCGI 195
Query: 625 ILLEMITGRTAVVQVGSSEMDLVNWMQ 651
+L M+ G Q S + +W +
Sbjct: 196 VLTAMLAGELPWDQPSDSCQEYSDWKE 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 446 FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
+ E+ + KI+H NIV L Y S LI + G L + K G +
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDAS-- 119
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNIL---LGHNMEPHVSDFGLARLAN--- 559
++I + + YLH+ VH DLKP N+L L + + +SDFGL+++ +
Sbjct: 120 ---RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 560 ---IAGGSPTLQSNRMPAEKP 577
A G+P + + A+KP
Sbjct: 174 VLSTACGTPGYVAPEVLAQKP 194
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 32/220 (14%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG G VYK ++ LA ++ + S+ +++ E++ + H NIV L ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+ ++ ++ G++ + + P+ S + K L YLH+ K
Sbjct: 105 YENNLWILIEFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHD---NKI 156
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLK NIL + + ++DFG++ A + +Q P ++ EV
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPY-----WMAPEV 206
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
+S + Y+A D++S G+ L+EM
Sbjct: 207 VMCETSKDRPYDYKA-------------DVWSLGITLIEM 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 113
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 114 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 168
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 169 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 205 PWDQPSDSCQEYSDWKE 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 36/207 (17%)
Query: 446 FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
+ E+ + H N+V + + + L +Y G L + GM P P +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDA 106
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
R + G+VYLH H D+KP N+LL +SDFGLA +
Sbjct: 107 QR--FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGV 624
L N+M P Y APE LK + ++ D++S G+
Sbjct: 162 LL--NKMCGTLP------------------------YVAPELLKRREFHAEPVDVWSCGI 195
Query: 625 ILLEMITGRTAVVQVGSSEMDLVNWMQ 651
+L M+ G Q S + +W +
Sbjct: 196 VLTAMLAGELPWDQPSDSCQEYSDWKE 222
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 114
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 169
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 170 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 206 PWDQPSDSCQEYSDWKE 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 438 GGSQRFKEFQ-------TEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
GGS +E Q EV+ + K+ H NI+ L+ Y + L++D + G L
Sbjct: 42 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 101
Query: 490 LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549
L K + KI++ + + + LH+ + VH DLKP NILL +M +
Sbjct: 102 LTEKVTLSE------KETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKL 152
Query: 550 SDFGLA 555
+DFG +
Sbjct: 153 TDFGFS 158
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 36/207 (17%)
Query: 446 FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
+ E+ + H N+V + + + L +Y G L + GM P P +
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDA 107
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
R + G+VYLH H D+KP N+LL +SDFGLA +
Sbjct: 108 QR--FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGV 624
L N+M P Y APE LK + ++ D++S G+
Sbjct: 163 LL--NKMXGTLP------------------------YVAPELLKRREFHAEPVDVWSCGI 196
Query: 625 ILLEMITGRTAVVQVGSSEMDLVNWMQ 651
+L M+ G Q S + +W +
Sbjct: 197 VLTAMLAGELPWDQPSDSCQEYSDWKE 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 456 IRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+ H N+V + + + L +Y G L + GM P P + R +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPDAQR--FFHQLM 115
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
G+VYLH H D+KP N+LL +SDFGLA + L N+M
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGT 170
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRT 634
P Y APE LK + ++ D++S G++L M+ G
Sbjct: 171 LP------------------------YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 635 AVVQVGSSEMDLVNWMQ 651
Q S + +W +
Sbjct: 207 PWDQPSDSCQEYSDWKE 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + DFGLAR +
Sbjct: 159 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---------- 205
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + + DI+S G I+ E
Sbjct: 206 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNMTVDIWSVGCIMAE 244
Query: 629 MITGRT 634
++TGRT
Sbjct: 245 LLTGRT 250
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 49/239 (20%)
Query: 402 ELLKASAFVLGKSGIGIVYKVV----LEDGHTLAVRRLGEG----GSQRFKEFQTEVEAI 453
ELL+ VLGK G G V++V G A++ L + ++ + E +
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 454 GKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG 513
+++H IV L + + + LI +Y+ G L L + + T + +
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY------LAE 129
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I+ L +LH+ K ++ DLKP NI+L H ++DFGL + +I G+ T
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVT------- 178
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
++E Y APE L ++ D +S G ++ +M+TG
Sbjct: 179 -------HXFCGTIE-------------YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 410 VLGKSGIGIVYKVVLED---GHTLAVRRLGEGGSQRFKEFQT---EVEAIGKIRHSNIVT 463
VLGK G V ++ +D G AV+ + + ++ + ++ EV+ + ++ H NI+
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
L ++ L+ + G L + + F+ V + +II+ + G+ Y+H+
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAA---RIIRQVLSGITYMHK 144
Query: 524 FSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
K VH DLKP N+LL + + DFGL
Sbjct: 145 ---NKIVHRDLKPENLLLESKSKDANIRIIDFGL-------------------------- 175
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S E + +YY APE L +K D++S GVIL +++G
Sbjct: 176 ---STHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 83 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 139
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 140 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 184
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ S T + Y +PE L + D+++ G I+
Sbjct: 185 ---------PESKQARANSFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 628 EMITG 632
+++ G
Sbjct: 227 QLVAG 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 79 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 135
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 136 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 180
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ S T Y +PE L + D+++ G I+
Sbjct: 181 ---------PESKQARANSFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 222
Query: 628 EMITG 632
+++ G
Sbjct: 223 QLVAG 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 42/187 (22%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV+ + ++ H NI+ L ++ L+ + G L + + F+ V +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAA--- 152
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSP 565
+II+ + G+ Y+H+ K VH DLKP N+LL + + DFGL
Sbjct: 153 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL----------- 198
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
S E + +YY APE L +K D++S GVI
Sbjct: 199 ------------------STHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVI 239
Query: 626 LLEMITG 632
L +++G
Sbjct: 240 LYILLSG 246
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 438 GGSQRFKEFQ-------TEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
GGS +E Q EV+ + K+ H NI+ L+ Y + L++D + G L
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114
Query: 490 LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549
L K + KI++ + + + LH+ + VH DLKP NILL +M +
Sbjct: 115 LTEKVTLSE------KETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKL 165
Query: 550 SDFGLA 555
+DFG +
Sbjct: 166 TDFGFS 171
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 461 IVTLRAYYWSVDEKLLIYDYIPNGSL-ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV 519
++ L Y + E +LI +Y G + + L MVS V +++IK I +G+
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV-----IRLIKQILEGVY 145
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEP----HVSDFGLAR 556
YLH+ VH DLKP NILL ++ P + DFG++R
Sbjct: 146 YLHQ---NNIVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR 182
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 53/218 (24%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQT--EVEAIGKIRHSNIVTLRAYY---WSVDEKLLIYDYI 481
GH +AV++L +T E+ + ++H N++ L + S++E +Y
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY--- 103
Query: 482 PNGSLATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
L T L G +V + +I I +GL Y+H +H DLKPSN+
Sbjct: 104 ----LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 156
Query: 540 LLGHNMEPHVSDFGLARLAN--IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597
+ + E + DF LAR + + G T
Sbjct: 157 AVNEDCELKILDFYLARHTDDEMTGYVAT------------------------------- 185
Query: 598 LGSYYQAPE-SLKVVKPSQKWDIYSYGVILLEMITGRT 634
+Y+APE L + +Q DI+S G I+ E++TGRT
Sbjct: 186 --RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 59/271 (21%)
Query: 377 SETLSENVEQYDLVPL-DTQVAFDLDELLKASAFVLGKSGIGIVYK-VVLEDGHTLAVRR 434
S++ + ++++ DL L D F+L EL+ G G VYK ++ G A++
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELV-------GNGTYGQVYKGRHVKTGQLAAIKV 56
Query: 435 LGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS-----VDEKL-LIYDYIPNGSLA 487
+ G + +E + E+ + K H NI T + +D++L L+ ++ GS+
Sbjct: 57 MDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT 115
Query: 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547
+ G + W I + I +GL +LH+ K +H D+K N+LL N E
Sbjct: 116 DLIKNTKG--NTLKEEWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168
Query: 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPE 606
+ DFG+ S L+ T ++ +G+ Y+ APE
Sbjct: 169 KLVDFGV-----------------------------SAQLDRTVGRRNTFIGTPYWMAPE 199
Query: 607 SLKVVKPSQ-----KWDIYSYGVILLEMITG 632
+ + K D++S G+ +EM G
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 438 GGSQRFKEFQ-------TEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSLATA 489
GGS +E Q EV+ + K+ H NI+ L+ Y + L++D + G L
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114
Query: 490 LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549
L K + KI++ + + + LH+ + VH DLKP NILL +M +
Sbjct: 115 LTEKVTLSE------KETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKL 165
Query: 550 SDFGLA 555
+DFG +
Sbjct: 166 TDFGFS 171
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + FGLAR +
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTD---------- 176
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 177 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 629 MITGRT 634
++TGRT
Sbjct: 216 LLTGRT 221
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 42/187 (22%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV+ + ++ H NI+ L ++ L+ + G L + + F+ V +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAA--- 153
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSP 565
+II+ + G+ Y+H+ K VH DLKP N+LL + + DFGL
Sbjct: 154 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL----------- 199
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
S E + +YY APE L +K D++S GVI
Sbjct: 200 ------------------STHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVI 240
Query: 626 LLEMITG 632
L +++G
Sbjct: 241 LYILLSG 247
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L +G + +E E + + ++ + IV L + +L+ + G L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 98
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L GK +P S +++ ++ G+ YL E K +VH DL N+LL +
Sbjct: 99 FLVGKR-----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAK 150
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
+SDFGL++ G + + R + P + + APE +
Sbjct: 151 ISDFGLSK---ALGADDSYYTARSAGKWPLK----------------------WYAPECI 185
Query: 609 KVVKPSQKWDIYSYGVILLEMIT 631
K S + D++SYGV + E ++
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 51/190 (26%)
Query: 457 RHSNIVTLRAYYWSVDEKLLIY-DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
R L + VD+ L Y D +P +PG VP ++ +
Sbjct: 87 RTDRETKLTLVFEHVDQDLTTYLDKVP----------EPG------VPTETIKDMMFQLL 130
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+GL +LH + VH DLKP NIL+ + + ++DFGLAR+ +
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--------------- 172
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTA 635
Q S+ VT +Y+APE L + D++S G I EM R
Sbjct: 173 -----QMALTSVVVTL---------WYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRK 216
Query: 636 VVQVGSSEMD 645
+ GSS++D
Sbjct: 217 PLFRGSSDVD 226
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 42/195 (21%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDE----KLLIYDYIPNGSLATALHGKPGMVSF 499
K E+ + H NI+ LR + +E KL + + LA +H + ++S
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 500 TPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559
+ + + I GL LHE VH DL P NILL N + + DF LAR
Sbjct: 134 QHIQY-----FMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDT 185
Query: 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW-D 618
++R +Y+APE + K K D
Sbjct: 186 ADANKTHYVTHR-----------------------------WYRAPELVMQFKGFTKLVD 216
Query: 619 IYSYGVILLEMITGR 633
++S G ++ EM +
Sbjct: 217 MWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 42/195 (21%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDE----KLLIYDYIPNGSLATALHGKPGMVSF 499
K E+ + H NI+ LR + +E KL + + LA +H + ++S
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 500 TPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559
+ + + I GL LHE VH DL P NILL N + + DF LAR
Sbjct: 134 QHIQY-----FMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDT 185
Query: 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW-D 618
++R +Y+APE + K K D
Sbjct: 186 ADANKTHYVTHR-----------------------------WYRAPELVMQFKGFTKLVD 216
Query: 619 IYSYGVILLEMITGR 633
++S G ++ EM +
Sbjct: 217 MWSAGCVMAEMFNRK 231
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + D GLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 39/128 (30%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN--IAGGSPTL 567
+I I +GL Y+H +H DLKPSN+ + + E + D GLAR + + G T
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVAT- 185
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVIL 626
+Y+APE L + +Q DI+S G I+
Sbjct: 186 --------------------------------RWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 627 LEMITGRT 634
E++TGRT
Sbjct: 214 AELLTGRT 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 73/304 (24%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 175
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 176 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 206
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 267 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 308
Query: 693 PEKR 696
P++R
Sbjct: 309 PKQR 312
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 73/304 (24%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 80 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 131
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 132 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 162
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 163 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 223 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 264
Query: 693 PEKR 696
P++R
Sbjct: 265 PKQR 268
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 51/268 (19%)
Query: 401 DELLKASAFV-LGKSGIGIVYKVV-LEDGHTLAVRR-LGEGGSQRFK-EFQTEVEAIGKI 456
DE+ K +G+ G V+K + G +A+++ L E + F E++ + +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 457 RHSNIVTL--------RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR- 507
+H N+V L Y L++D+ H G++S V +++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSE 126
Query: 508 -VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
++++ + GL Y+H K +H D+K +N+L+ + ++DFGLAR ++A S
Sbjct: 127 IKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-- 181
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVI 625
+P + V+L +Y+ PE L + D++ G I
Sbjct: 182 ---------QPNRYXNRVVTL-------------WYRPPELLLGERDYGPPIDLWGAGCI 219
Query: 626 LLEMITGRTAVVQVGSSEMDLVNWMQLC 653
+ EM T R+ ++Q + + L QLC
Sbjct: 220 MAEMWT-RSPIMQGNTEQHQLALISQLC 246
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 59/258 (22%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
Q E+ + + S + Y + +I +Y+ GS L P F +
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP----FDEFQIAT 124
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
++K I KGL YLH +K +H D+K +N+LL + ++DFG+A
Sbjct: 125 ---MLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAG---------- 168
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVI 625
L T ++ +G+ ++ APE ++ K DI+S G+
Sbjct: 169 -------------------QLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT 209
Query: 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKE-EEIIAVLKI 684
+E+ G +S+M + + L I + P P L D K +E I
Sbjct: 210 AIELAKGEPP-----NSDMHPMRVLFL-IPKNNP------PTLVGDFTKSFKEFID---- 253
Query: 685 AMACVHSSPEKRPTMRHI 702
AC++ P RPT + +
Sbjct: 254 --ACLNKDPSFRPTAKEL 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 43/229 (18%)
Query: 410 VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTEVEAIGKIRHSNIVT 463
VLG G VYK + + DG + A++ L E S + KE E + + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMV-SFTPVPWSVRVKIIKGIAKGLVYLH 522
L + +L + +P G L + G + S + W ++ IAKG+ YL
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLE 136
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQ 582
+ + VH DL N+L+ ++DFGLARL +I ++P +
Sbjct: 137 DV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK------- 186
Query: 583 KSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
+ A ES+ + + + D++SYGV + E++T
Sbjct: 187 -------------------WMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 34/144 (23%)
Query: 502 VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561
VP ++ + +GL +LH + VH DLKP NIL+ + + ++DFGLAR+ +
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYS 621
Q S+ VT +Y+APE L + D++S
Sbjct: 173 -------------------QMALTSVVVTL---------WYRAPEVLLQSSYATPVDLWS 204
Query: 622 YGVILLEMITGRTAVVQVGSSEMD 645
G I EM R + GSS++D
Sbjct: 205 VGCIFAEMF--RRKPLFRGSSDVD 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 94/225 (41%), Gaps = 41/225 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG+ G VYK + E G +A++++ +E E+ + + ++V Y+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+ ++ +Y GS++ + + ++ + I++ KGL YLH +
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI-----ATILQSTLKGLEYLHFM---RK 146
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H D+K NILL ++DFG +AG + R
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFG------VAGQLTDXMAKR------------------ 182
Query: 590 TTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ +G+ ++ APE ++ + + DI+S G+ +EM G+
Sbjct: 183 -----NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 34/144 (23%)
Query: 502 VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561
VP ++ + +GL +LH + VH DLKP NIL+ + + ++DFGLAR+ +
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYS 621
Q S+ VT +Y+APE L + D++S
Sbjct: 173 -------------------QMALTSVVVTL---------WYRAPEVLLQSSYATPVDLWS 204
Query: 622 YGVILLEMITGRTAVVQVGSSEMD 645
G I EM R + GSS++D
Sbjct: 205 VGCIFAEMF--RRKPLFRGSSDVD 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 136
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 137 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 181
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ + T + Y +PE L + D+++ G I+
Sbjct: 182 ---------PESKQARANAFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 628 EMITG 632
+++ G
Sbjct: 224 QLVAG 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 50/232 (21%)
Query: 410 VLGKSGIGIVYKVVLED---GHTLAVRRLGEGGSQRFKEFQT---EVEAIGKIRHSNIVT 463
VLGK G V ++ +D G AV+ + + ++ + ++ EV+ + ++ H NI+
Sbjct: 39 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
L ++ L+ + G L + + F+ V + +II+ + G+ Y+H+
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAA---RIIRQVLSGITYMHK 150
Query: 524 FSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
K VH DLKP N+LL + + DFGL
Sbjct: 151 ---NKIVHRDLKPENLLLESKSKDANIRIIDFGL-------------------------- 181
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S E + +YY APE L +K D++S GVIL +++G
Sbjct: 182 ---STHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 229
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 41/205 (20%)
Query: 436 GEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPG 495
G S+ F+E + + G H N++ L ++ D L+++ + GS+ + +H +
Sbjct: 51 GHIRSRVFREVEMLYQCQG---HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR- 106
Query: 496 MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH--NMEP-HVSDF 552
F + SV +++ +A L +LH K H DLKP NIL H + P + DF
Sbjct: 107 --HFNELEASV---VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDF 158
Query: 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK 612
L G L + P P E+ T S+ Y APE ++
Sbjct: 159 DL-------GSGIKLNGDCSPISTP----------ELLTPCGSAE----YMAPEVVEAFS 197
Query: 613 PS-----QKWDIYSYGVILLEMITG 632
++ D++S GVIL +++G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 73/304 (24%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 147
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 148 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 178
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 239 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 280
Query: 693 PEKR 696
P++R
Sbjct: 281 PKQR 284
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 73/304 (24%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 175
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 176 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 206
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 267 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 308
Query: 693 PEKR 696
P++R
Sbjct: 309 PKQR 312
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 73/307 (23%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 77 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 128
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 129 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 159
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 220 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 261
Query: 693 PEKRPTM 699
P++R ++
Sbjct: 262 PKQRISI 268
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+I I +GL Y+H +H DLKPSN+ + + E + D GLAR +
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTD---------- 176
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 177 -------------DEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 629 MITGRT 634
++TGRT
Sbjct: 216 LLTGRT 221
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 50/257 (19%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRR-LGEGGSQRFK-EFQTEVEAIGKIRHSNIVTL--- 464
+G+ G V+K + G +A+++ L E + F E++ + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 465 -----RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR--VKIIKGIAKG 517
Y L++D+ H G++S V +++ ++++ + G
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
L Y+H K +H D+K +N+L+ + ++DFGLAR ++A S +P
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-----------QP 183
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAV 636
+ V+L +Y+ PE L + D++ G I+ EM T R+ +
Sbjct: 184 NRYXNRVVTL-------------WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
Query: 637 VQVGSSEMDLVNWMQLC 653
+Q + + L QLC
Sbjct: 230 MQGNTEQHQLALISQLC 246
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 73/304 (24%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 175
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 176 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 206
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 267 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 308
Query: 693 PEKR 696
P++R
Sbjct: 309 PKQR 312
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 44/229 (19%)
Query: 410 VLGKSGIGIVYKV-VLEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V+ + +G A++ L + R K+ + E + + H I+ +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ + +I DYI G L + L P V + L YLH
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRF------PNPVAKFYAAEVCLALEYLHS-- 124
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585
K ++ DLKP NILL N ++DFG A+ V
Sbjct: 125 -KDIIYRDLKPENILLDKNGHIKITDFGFAKYV------------------------PDV 159
Query: 586 SLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634
+ + T Y APE + ++ D +S+G+++ EM+ G T
Sbjct: 160 TYXLCGTPD-------YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 201
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 73/307 (23%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 76 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 127
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A N+M
Sbjct: 128 -IVHSDLKPANFLIVDGMLKLI-DFGIA--------------NQMQP------------- 158
Query: 588 EVTTTNSSSNLGSY-YQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTA 635
+ T+ S +G+ Y PE++K + S++ D++S G IL M G+T
Sbjct: 159 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
Query: 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSS 692
Q+ I + L ++DP PD E+++ VLK C+
Sbjct: 219 FQQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRD 260
Query: 693 PEKRPTM 699
P++R ++
Sbjct: 261 PKQRISI 267
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 47/216 (21%)
Query: 449 EVEAIGKIRHSNIVTL--------RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFT 500
E++ + ++H N+V L Y L++D+ H G++S
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNV 118
Query: 501 PVPWSVR--VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
V +++ ++++ + GL Y+H K +H D+K +N+L+ + ++DFGLAR
Sbjct: 119 LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKW 617
++A S +P + V+L +Y+ PE L +
Sbjct: 176 SLAKNS-----------QPNRYXNRVVTL-------------WYRPPELLLGERDYGPPI 211
Query: 618 DIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLC 653
D++ G I+ EM T R+ ++Q + + L QLC
Sbjct: 212 DLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLC 246
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 138
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 139 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 183
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 184 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 628 EMITG 632
+++ G
Sbjct: 226 QLVAG 230
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 41/223 (18%)
Query: 411 LGKSGIGIVYKVVLEDGH---TLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G V+K + H L RL + E+ + +++H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
S + L++++ + L G + P V+ + + + KGL + H +
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLD----PEIVKSFLFQ-LLKGLGFCHS---R 120
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+H DLKP N+L+ N E ++DFGLAR A G P + S
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLAR----AFGIPV----------------RCYSA 160
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEM 629
EV T +Y+ P+ L K S D++S G I E+
Sbjct: 161 EVVTL--------WYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 138
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 139 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 183
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 184 ---------PESKQARANXFVGT---------AQYVSPELLTEKSAXKSSDLWALGCIIY 225
Query: 628 EMITG 632
+++ G
Sbjct: 226 QLVAG 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 410 VLGKSG-IGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAY 467
++G+ G G VYK ++ LA ++ + S+ +++ E++ + H NIV L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
++ + ++ ++ G++ + + P+ S + K L YLH+
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVM-----LELERPLTESQIQVVCKQTLDALNYLHD---N 127
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
K +H DLK NIL + + ++DFG++ A + T R
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTXIQRR---------------- 166
Query: 588 EVTTTNSSSNLGS-YYQAPESLKVVKPSQ-----KWDIYSYGVILLEM 629
S +G+ Y+ APE + K D++S G+ L+EM
Sbjct: 167 -------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 138
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 139 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 183
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 184 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 628 EMITG 632
+++ G
Sbjct: 226 QLVAG 230
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 410 VLGKSGIGIVYKVVLEDGHT---LAVRRLGEGGSQRF--KEFQTEVEAIGKIRHSNIVTL 464
++G+ G VY + D +T +A++++ K E+ + +++ I+
Sbjct: 33 LIGRGSYGYVY--LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII-- 88
Query: 465 RAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRVKIIKGIAKGLV---- 519
R Y + + LL +D L L + P + + IK I L+
Sbjct: 89 RLYDLIIPDDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT---LQSNRMPAEK 576
++HE +H DLKP+N LL + V DFGLAR N + L+ N P
Sbjct: 144 FIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVILLEMI 630
+ +++ S VT +Y+APE + + + K DI+S G I E++
Sbjct: 201 NKNLKKQLTSHVVT---------RWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 136
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 137 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 181
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 182 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 628 EMITG 632
+++ G
Sbjct: 224 QLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 85 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 141
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 142 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 186
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 187 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 228
Query: 628 EMITG 632
+++ G
Sbjct: 229 QLVAG 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 87 ERDVMSRLDHPFFVKL-YFCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 143
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 144 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 188
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 189 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 230
Query: 628 EMITG 632
+++ G
Sbjct: 231 QLVAG 235
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 47/216 (21%)
Query: 449 EVEAIGKIRHSNIVTL--------RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFT 500
E++ + ++H N+V L Y L++D+ H G++S
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNV 117
Query: 501 PVPWSVR--VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
V +++ ++++ + GL Y+H K +H D+K +N+L+ + ++DFGLAR
Sbjct: 118 LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKW 617
++A S +P + V+L +Y+ PE L +
Sbjct: 175 SLAKNS-----------QPNRYXNRVVTL-------------WYRPPELLLGERDYGPPI 210
Query: 618 DIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLC 653
D++ G I+ EM T R+ ++Q + + L QLC
Sbjct: 211 DLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLC 245
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 136
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 137 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 181
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 182 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 628 EMITG 632
+++ G
Sbjct: 224 QLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 138
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 139 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 183
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 184 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 628 EMITG 632
+++ G
Sbjct: 226 QLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 136
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 137 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 181
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 182 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 628 EMITG 632
+++ G
Sbjct: 224 QLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 138
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 139 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 183
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 184 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 628 EMITG 632
+++ G
Sbjct: 226 QLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 64 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 120
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 121 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 165
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 166 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 207
Query: 628 EMITG 632
+++ G
Sbjct: 208 QLVAG 212
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 83 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 139
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 140 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 184
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T + Y +PE L + D+++ G I+
Sbjct: 185 ---------PESKQARANXFVGT---------AQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 628 EMITG 632
+++ G
Sbjct: 227 QLVAG 231
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 55/236 (23%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
+E E+ + + H NI+ L + L+ ++ G L + ++
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI------INRHKFD 144
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVSDFGLARLANI 560
I+K I G+ YLH+ + VH D+KP NILL + + + DFGL+ +
Sbjct: 145 ECDAANIMKQILSGICYLHKHNI---VHRDIKPENILLENKNSLLNIKIVDFGLSSFFS- 200
Query: 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDI 619
K ++R LG+ YY APE LK K ++K D+
Sbjct: 201 ------------KDYKLRDR-----------------LGTAYYIAPEVLK-KKYNEKCDV 230
Query: 620 YSYGVILLEMITGR-----------TAVVQVGSSEMDLVNWMQLCIEEKKPLADVL 664
+S GVI+ ++ G V+ G D +W + E K+ + +L
Sbjct: 231 WSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLML 286
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 79 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 135
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 136 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 180
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 181 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 222
Query: 628 EMITG 632
+++ G
Sbjct: 223 QLVAG 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 50/232 (21%)
Query: 410 VLGKSGIGIVYKVVLED---GHTLAVRRLGEGGSQRFKEFQT---EVEAIGKIRHSNIVT 463
VLGK G V ++ +D G AV+ + + ++ + ++ EV+ + ++ H NI
Sbjct: 33 VLGKGSFGEV--ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE 523
L ++ L+ + G L + + F+ V + +II+ + G+ Y H+
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAA---RIIRQVLSGITYXHK 144
Query: 524 FSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
K VH DLKP N+LL + + DFGL
Sbjct: 145 ---NKIVHRDLKPENLLLESKSKDANIRIIDFGL-------------------------- 175
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S E + +YY APE L +K D++S GVIL +++G
Sbjct: 176 ---STHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 112/283 (39%), Gaps = 53/283 (18%)
Query: 429 TLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYIPNGSL 486
+ V ++ + +++ ++F E + H N++ + S LI ++P GSL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL 96
Query: 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546
LH V V S VK +A+G+ +LH P H L ++++ +M
Sbjct: 97 YNVLHEGTNFV----VDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMT 151
Query: 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE 606
+S +A++ + PA E QK + TN S
Sbjct: 152 ARIS------MADVKFSFQSPGRMYAPAWVAPEALQK----KPEDTNRRSA--------- 192
Query: 607 SLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP 666
D++S+ V+L E++T + + E+ M++ +E +P + P
Sbjct: 193 -----------DMWSFAVLLWELVTREVPFADLSNMEIG----MKVALEGLRP---TIPP 234
Query: 667 YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709
++P K ++KI C++ P KRP I L+++
Sbjct: 235 GISPHVSK------LMKI---CMNEDPAKRPKFDMIVPILEKM 268
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 46/198 (23%)
Query: 443 FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKL-------LIYDYIPNGSLATALHGKPG 495
+ F+ E + + H IV A Y + + + ++ +Y+ +L +H +
Sbjct: 56 YLRFRREAQNAAALNHPAIV---AVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-- 110
Query: 496 MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
P+ +++I + L + H+ +H D+KP+NI++ V DFG+A
Sbjct: 111 ----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPS 614
R +G S T +++ +G+ Y +PE +
Sbjct: 164 RAIADSGNS--------------------------VTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 615 QKWDIYSYGVILLEMITG 632
+ D+YS G +L E++TG
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 57 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 113
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 114 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 158
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 159 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 200
Query: 628 EMITG 632
+++ G
Sbjct: 201 QLVAG 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 59 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 115
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 116 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 160
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 161 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 202
Query: 628 EMITG 632
+++ G
Sbjct: 203 QLVAG 207
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
++ + +GL Y+H +H DLKPSN+ + + E + DFGLAR A+
Sbjct: 128 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD---------- 174
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
+ ++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 175 -------------EEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 629 MITGRT 634
++ G+
Sbjct: 214 LLQGKA 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
++ + +GL Y+H +H DLKPSN+ + + E + DFGLAR A+
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD---------- 182
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
+ ++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 183 -------------EEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 629 MITGRT 634
++ G+
Sbjct: 222 LLQGKA 227
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 58 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 114
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 115 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 159
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 160 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 201
Query: 628 EMITG 632
+++ G
Sbjct: 202 QLVAG 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 76/326 (23%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 43 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----- 513
N+V L L+ I ++ G+L+T L K VP+ + K
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF----VPYKTPEDLYKDFLTLE 148
Query: 514 --------IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
R+P + + APE++ + + D++S+GV+
Sbjct: 206 RKGDARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVL 239
Query: 626 LLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKI 684
L E+ + G + V E + C K+ Y P+ + +
Sbjct: 240 LWEIFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQT 283
Query: 685 AMACVHSSPEKRPTMRHISDALDRLI 710
+ C H P +RPT + + L L+
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 42 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 209 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 243 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 286
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
++ + +GL Y+H +H DLKPSN+ + + E + DFGLAR A+
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD---------- 182
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPE-SLKVVKPSQKWDIYSYGVILLE 628
+ ++ V T +Y+APE L + +Q DI+S G I+ E
Sbjct: 183 -------------EEMTGYVAT--------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 629 MITGRT 634
++ G+
Sbjct: 222 LLQGKA 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLI-YDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + ++ H V L + + DEKL Y NG L + K G T +
Sbjct: 60 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYT- 116
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
I L YLH K +H DLKP NILL +M ++DFG A++ +
Sbjct: 117 ----AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-------- 161
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
P+ +Q ++ T Y +PE L + D+++ G I+
Sbjct: 162 ---------PESKQARANXFVGTAQ---------YVSPELLTEKSACKSSDLWALGCIIY 203
Query: 628 EMITG 632
+++ G
Sbjct: 204 QLVAG 208
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 44 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 154 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 211 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 244
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 245 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 288
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 289 CWHGEPSQRPTFSELVEHLGNLL 311
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 72/193 (37%), Gaps = 39/193 (20%)
Query: 453 IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIK 512
+ ++H +V L + + D+ + DYI G L L + + R +
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-------PRARFYA 145
Query: 513 G-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNR 571
IA L YLH + V+ DLKP NILL ++DFGL +
Sbjct: 146 AEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--------------- 187
Query: 572 MPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
++E +T S+ Y APE L + D + G +L EM+
Sbjct: 188 -------------ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY 234
Query: 632 GRTAVVQVGSSEM 644
G ++EM
Sbjct: 235 GLPPFYSRNTAEM 247
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 12 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 129
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 130 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 182 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 215
Query: 629 MIT 631
++T
Sbjct: 216 LMT 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 42/228 (18%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYY 468
LG G V+ V G ++ + + SQ ++ + E+E + + H NI+ + +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
++ + G L + + +++K + L Y H +
Sbjct: 90 EDYHNMYIVMETCEGGELLERI--VSAQARGKALSEGYVAELMKQMMNALAYFH---SQH 144
Query: 529 YVHGDLKPSNILLGHNMEPH----VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
VH DLKP NIL + PH + DFGLA L
Sbjct: 145 VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFK------------------------- 178
Query: 585 VSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
S E +T + + L Y APE K + K DI+S GV++ ++TG
Sbjct: 179 -SDEHSTNAAGTAL---YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
V + I IA+ + +LH K +H DLKPSNI + V DFGL
Sbjct: 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLV---------- 211
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
++ +E Q + T+ Y +PE + S K DI+S G+I
Sbjct: 212 ------TAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI 265
Query: 626 LLEMI 630
L E++
Sbjct: 266 LFELL 270
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 180 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 213
Query: 629 MIT 631
++T
Sbjct: 214 LMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 9 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 126
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 127 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 179 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 212
Query: 629 MIT 631
++T
Sbjct: 213 LMT 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 97/235 (41%), Gaps = 50/235 (21%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQR---FKEFQTEVEAIGKIRHSNIVTLR 465
+LG G+ V+ L D +AV+ L ++ + F+ E + + H IV
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV--- 75
Query: 466 AYYWSVDEKL-------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
A Y + + + ++ +Y+ +L +H + P+ +++I + L
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQAL 129
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ H+ +H D+KP+NI++ V DFG+AR +G S
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------- 172
Query: 579 ERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
T +++ +G+ Y +PE + + D+YS G +L E++TG
Sbjct: 173 ------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 182
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ EV T YY+APE + + + DI+S G I+ EMI G V
Sbjct: 183 ---------TPEVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 42 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 209 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 243 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 286
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 97/235 (41%), Gaps = 50/235 (21%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQR---FKEFQTEVEAIGKIRHSNIVTLR 465
+LG G+ V+ L D +AV+ L ++ + F+ E + + H IV
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV--- 75
Query: 466 AYYWSVDEKL-------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
A Y + + + ++ +Y+ +L +H + P+ +++I + L
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQAL 129
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ H+ +H D+KP+NI++ V DFG+AR +G S
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------- 172
Query: 579 ERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
T +++ +G+ Y +PE + + D+YS G +L E++TG
Sbjct: 173 ------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 46/198 (23%)
Query: 443 FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKL-------LIYDYIPNGSLATALHGKPG 495
+ F+ E + + H IV A Y + + + ++ +Y+ +L +H +
Sbjct: 56 YLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-- 110
Query: 496 MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
P+ +++I + L + H+ +H D+KP+NI++ V DFG+A
Sbjct: 111 ----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIA 163
Query: 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPS 614
R +G S T +++ +G+ Y +PE +
Sbjct: 164 RAIADSGNS--------------------------VTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 615 QKWDIYSYGVILLEMITG 632
+ D+YS G +L E++TG
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 9 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ- 126
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 127 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 179 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 212
Query: 629 MIT 631
++T
Sbjct: 213 LMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 178 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 211
Query: 629 MIT 631
++T
Sbjct: 212 LMT 214
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 396 VAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTL-AVRRLGEGGSQRFKEFQT---EVE 451
V FD E+L+A +GK G V V D + A++ + + E + E++
Sbjct: 12 VNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ 67
Query: 452 AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKII 511
+ + H +V L + ++ ++ D + G L L T VK+
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET-------VKLF 120
Query: 512 KGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA-------RLANIAGGS 564
I + ++ L ++ +H D+KP NILL + H++DF +A ++ +AG
Sbjct: 121 --ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK 178
Query: 565 PTL 567
P +
Sbjct: 179 PYM 181
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 181 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 214
Query: 629 MIT 631
++T
Sbjct: 215 LMT 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 33 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 200 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 234 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 277
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 180 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 213
Query: 629 MIT 631
++T
Sbjct: 214 LMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 181 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 214
Query: 629 MIT 631
++T
Sbjct: 215 LMT 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 360 AKGGKGRKECLCFRKDESETLSENVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIV 419
A GG G ++ L T+ + +L +V + ELLK VLG G V
Sbjct: 23 ADGGDGGEQLL--------TVKHELRTANLTGHAEKVGIENFELLK----VLGTGAYGKV 70
Query: 420 YKVVLEDGHT----LAVRRLGEG----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV 471
+ V GH A++ L + ++ + +TE + + IR S + Y +
Sbjct: 71 FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 130
Query: 472 DEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG-IAKGLVYLHEFSPKKY 529
+ KL LI DYI G L T L + V+I G I L +LH+
Sbjct: 131 ETKLHLILDYINGGELFTHLSQRERFTEH-------EVQIYVGEIVLALEHLHKLG---I 180
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ D+K NILL N ++DFGL++
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSK 207
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 178 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 211
Query: 629 MIT 631
++T
Sbjct: 212 LMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 18 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 135
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 136 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 188 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 221
Query: 629 MIT 631
++T
Sbjct: 222 LMT 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 181 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 214
Query: 629 MIT 631
++T
Sbjct: 215 LMT 217
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 33 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 200 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 234 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 277
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 42 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 209 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 243 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 286
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 128
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 129 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 181 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 214
Query: 629 MIT 631
++T
Sbjct: 215 LMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 33 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 150
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 151 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 203 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 236
Query: 629 MIT 631
++T
Sbjct: 237 LMT 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 79 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 246 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 280 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 323
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 324 CWHGEPSQRPTFSELVEHLGNLL 346
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 15 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 185 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 218
Query: 629 MIT 631
++T
Sbjct: 219 LMT 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 123/321 (38%), Gaps = 67/321 (20%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 44 QVIEADAFGIDKTATX----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTP-------VPWSVRVKI 510
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 511 IKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSN 570
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 571 RMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
R+P + + APE++ + + D++S+GV+L E+
Sbjct: 211 RLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 631 T-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACV 689
+ G + V E + C K+ Y P+ + + + C
Sbjct: 245 SLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCW 288
Query: 690 HSSPEKRPTMRHISDALDRLI 710
H P +RPT + + L L+
Sbjct: 289 HGEPSQRPTFSELVEHLGNLL 309
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 46/198 (23%)
Query: 443 FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKL-------LIYDYIPNGSLATALHGKPG 495
+ F+ E + + H IV A Y + + + ++ +Y+ +L +H +
Sbjct: 73 YLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-- 127
Query: 496 MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
P+ +++I + L + H+ +H D+KP+NI++ V DFG+A
Sbjct: 128 ----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIA 180
Query: 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPS 614
R +G S T +++ +G+ Y +PE +
Sbjct: 181 RAIADSGNS--------------------------VTQTAAVIGTAQYLSPEQARGDSVD 214
Query: 615 QKWDIYSYGVILLEMITG 632
+ D+YS G +L E++TG
Sbjct: 215 ARSDVYSLGCVLYEVLTG 232
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGE--GGSQRFKEFQTEVEAIGKI-RHSNIVTLRA 466
+G G V+K V DG A++R + GS + EV A + +HS++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR--- 73
Query: 467 YY--WSVDEKLLIY-DYIPNGSLATALHGKPGMVSFTPVPWSVRVK-IIKGIAKGLVYLH 522
Y+ W+ D+ +LI +Y GSLA A+ ++S+ +K ++ + +GL Y+H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK---EAELKDLLLQVGRGLRYIH 130
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVS 550
S VH D+KPSNI + P+ +
Sbjct: 131 SMS---LVHMDIKPSNIFISRTSIPNAA 155
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S GVI+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 178 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 211
Query: 629 MIT 631
++T
Sbjct: 212 LMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 178 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 211
Query: 629 MIT 631
++T
Sbjct: 212 LMT 214
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S GVI+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 33 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 200 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 234 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 277
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGE--GGSQRFKEFQTEVEAIGKI-RHSNIVTLRA 466
+G G V+K V DG A++R + GS + EV A + +HS++V
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR--- 75
Query: 467 YY--WSVDEKLLIY-DYIPNGSLATALHGKPGMVSFTPVPWSVRVK-IIKGIAKGLVYLH 522
Y+ W+ D+ +LI +Y GSLA A+ ++S+ +K ++ + +GL Y+H
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK---EAELKDLLLQVGRGLRYIH 132
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVS 550
S VH D+KPSNI + P+ +
Sbjct: 133 SMS---LVHMDIKPSNIFISRTSIPNAA 157
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGE--GGSQRFKEFQTEVEAIGKI-RHSNIVTLRA 466
+G G V+K V DG A++R + GS + EV A + +HS++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR--- 73
Query: 467 YY--WSVDEKLLIY-DYIPNGSLATALHGKPGMVSFTPVPWSVRVK-IIKGIAKGLVYLH 522
Y+ W+ D+ +LI +Y GSLA A+ ++S+ +K ++ + +GL Y+H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK---EAELKDLLLQVGRGLRYIH 130
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVS 550
S VH D+KPSNI + P+ +
Sbjct: 131 SMS---LVHMDIKPSNIFISRTSIPNAA 155
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 14 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 131
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 132 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 184 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 217
Query: 629 MIT 631
++T
Sbjct: 218 LMT 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 430 LAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488
+A++ L +G + +E E + + ++ + IV L + +L+ + G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHK 424
Query: 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548
L GK +P S +++ ++ G+ YL E K +VH +L N+LL +
Sbjct: 425 FLVGK-----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAK 476
Query: 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608
+SDFGL++ G + + R + P + + APE +
Sbjct: 477 ISDFGLSK---ALGADDSYYTARSAGKWPLK----------------------WYAPECI 511
Query: 609 KVVKPSQKWDIYSYGVILLEMIT 631
K S + D++SYGV + E ++
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKE-----FQTEVEAIGKIRHSNIVTL 464
LG+ VYK ++ +A++++ G K+ E++ + ++ H NI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 465 RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEF 524
+ L++D+ + T L S P ++ ++ + +GL YLH+
Sbjct: 78 LDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKAYMLMTL-QGLEYLHQH 131
Query: 525 SPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
+H DLKP+N+LL N ++DFGLA+
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 2 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 119
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 120 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 172 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 205
Query: 629 MIT 631
++T
Sbjct: 206 LMT 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E + + K+ +V+L Y + D L+ + G L ++ G F P + V
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM-GQAGF---PEARAV 289
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
I GL LH ++ V+ DLKP NILL + +SD GLA ++ G
Sbjct: 290 FYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEG----- 339
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
+++ V T Y APE +K + + D ++ G +L E
Sbjct: 340 --------------QTIKGRVGTVG--------YMAPEVVKNERYTFSPDWWALGCLLYE 377
Query: 629 MITGRTAVVQ 638
MI G++ Q
Sbjct: 378 MIAGQSPFQQ 387
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 121/318 (38%), Gaps = 70/318 (22%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
++++A+AF LGK VL+ +AV+ L KE +E++ + + +H
Sbjct: 61 KVVEATAFGLGKE------DAVLK----VAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPV------PWSVR--VKII 511
NIV L L+I +Y G L L K ++ P S R +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 512 KGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNR 571
+A+G+ +L + K +H D+ N+LL + + DFGLAR +I S +
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI---- 221
Query: 572 MPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
++ L + APES+ + + D++SYG++L E+ +
Sbjct: 222 --------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
Query: 632 ---GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMAC 688
+ V S LV K + P AP + I AC
Sbjct: 262 LGLNPYPGILVNSKFYKLV----------KDGYQMAQPAFAPK--------NIYSIMQAC 303
Query: 689 VHSSPEKRPTMRHISDAL 706
P RPT + I L
Sbjct: 304 WALEPTHRPTFQQICSFL 321
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 397 AFDLDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEF 446
A L +LK + F VLG G VYK + + +G + A++ L E S + KE
Sbjct: 2 AMALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWS 505
E + + + ++ L + +L I +P G L + K + S + W
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 120
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
V+ IA+G+ YL + ++ VH DL N+L+ ++DFGLA+L
Sbjct: 121 VQ------IAEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
+ ++P K ++LE S L Y + + D++SYGV
Sbjct: 172 HAEGGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVT 205
Query: 626 LLEMIT 631
+ E++T
Sbjct: 206 VWELMT 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 72/192 (37%), Gaps = 53/192 (27%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + + H NIV L + LI +Y G + L HG+
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-------EKEA 113
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG---- 562
R K + I + Y H+ K+ VH DLK N+LL +M ++DFG + + G
Sbjct: 114 RSKF-RQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT 169
Query: 563 --GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620
GSP P P+ Q G Y PE D++
Sbjct: 170 FCGSP-------PYAAPELFQ-----------------GKKYDGPEV----------DVW 195
Query: 621 SYGVILLEMITG 632
S GVIL +++G
Sbjct: 196 SLGVILYTLVSG 207
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 41/223 (18%)
Query: 411 LGKSGIGIVYKVVLEDGH---TLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G V+K + H L RL + E+ + +++H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
S + L++++ + L G + P V+ + + + KGL + H +
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLD----PEIVKSFLFQ-LLKGLGFCHS---R 120
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
+H DLKP N+L+ N E +++FGLAR A G P + S
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLAR----AFGIPV----------------RCYSA 160
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEM 629
EV T +Y+ P+ L K S D++S G I E+
Sbjct: 161 EVVTL--------WYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 184
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
V VT YY+APE + + + DI+S G I+ EMI G V
Sbjct: 185 --------VPFVVT---------RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 225
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 226 LFPGTDHIDQWN 237
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGE--GGSQRFKEFQTEVEAIGKI-RHSNIVTLRA 466
+G G V+K V DG A++R + GS + EV A + +HS++V
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR--- 71
Query: 467 YY--WSVDEKLLIY-DYIPNGSLATALHGKPGMVSFTPVPWSVRVK-IIKGIAKGLVYLH 522
Y+ W+ D+ +LI +Y GSLA A+ ++S+ +K ++ + +GL Y+H
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK---EAELKDLLLQVGRGLRYIH 128
Query: 523 EFSPKKYVHGDLKPSNILLGHNMEPHVS 550
S VH D+KPSNI + P+ +
Sbjct: 129 SMS---LVHMDIKPSNIFISRTSIPNAA 153
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 69/323 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 33 QVIEADAFGIDKTATC----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIK----- 512
N+V L L+ I ++ G+L+T L K V + P + +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 513 ----GIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 200 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 234 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 277
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 278 CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 71/303 (23%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVR--RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
+G G V++V+ E A++ L E +Q ++ E+ + K++ + +R Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 469 WSV-DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ + D+ + + N L + L K + PW R K + + + +H+
Sbjct: 96 YEITDQYIYMVMECGNIDLNSWLKKKKSID-----PWE-RKSYWKNMLEAVHTIHQHG-- 147
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSL 587
VH DLKP+N L+ M + DFG+A +Q + K
Sbjct: 148 -IVHSDLKPANFLIVDGMLKLI-DFGIAN---------QMQPDXXXVVKDS--------- 187
Query: 588 EVTTTNSSSNLGSYYQAPESLKVVKPSQK-----------WDIYSYGVILLEMITGRTAV 636
+V T N Y PE++K + S++ D++S G IL M G+T
Sbjct: 188 QVGTVN--------YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Query: 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA---PDADKEEEIIAVLKIAMACVHSSP 693
Q+ I + L ++DP PD E+++ VLK C+ P
Sbjct: 240 QQI--------------INQISKLHAIIDPNHEIEFPDI-PEKDLQDVLK---CCLKRDP 281
Query: 694 EKR 696
++R
Sbjct: 282 KQR 284
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E + + K+ +V+L Y + D L+ + G L ++ G F P + V
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM-GQAGF---PEARAV 289
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
I GL LH ++ V+ DLKP NILL + +SD GLA ++ G
Sbjct: 290 FYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEG----- 339
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
+++ V T Y APE +K + + D ++ G +L E
Sbjct: 340 --------------QTIKGRVGTVG--------YMAPEVVKNERYTFSPDWWALGCLLYE 377
Query: 629 MITGRTAVVQ 638
MI G++ Q
Sbjct: 378 MIAGQSPFQQ 387
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 121/318 (38%), Gaps = 70/318 (22%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
++++A+AF LGK VL+ +AV+ L KE +E++ + + +H
Sbjct: 61 KVVEATAFGLGKE------DAVLK----VAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPV------PWSVR--VKII 511
NIV L L+I +Y G L L K ++ P S R +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 512 KGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNR 571
+A+G+ +L + K +H D+ N+LL + + DFGLAR +I S +
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI---- 221
Query: 572 MPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631
++ L + APES+ + + D++SYG++L E+ +
Sbjct: 222 --------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
Query: 632 ---GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMAC 688
+ V S LV K + P AP + I AC
Sbjct: 262 LGLNPYPGILVNSKFYKLV----------KDGYQMAQPAFAPK--------NIYSIMQAC 303
Query: 689 VHSSPEKRPTMRHISDAL 706
P RPT + I L
Sbjct: 304 WALEPTHRPTFQQICSFL 321
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 443 FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLL--IYDYIPNGSLATALHGKPGMVSFT 500
++ E+ + K+ H N+V L +E L +++ + G + + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-------VPTLK 132
Query: 501 PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560
P+ + + KG+ YLH +K +H D+KPSN+L+G + ++DFG ++N
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFG---VSNE 186
Query: 561 AGGSPTLQSN 570
GS L SN
Sbjct: 187 FKGSDALLSN 196
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 40/237 (16%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
VLG+ G V K D A++++ ++ +EV + + H +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 469 W----------SVDEKLLIY---DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIA 515
+V +K ++ +Y N +L +H + + W ++ + I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDEYW----RLFRQIL 126
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+ L Y+H + +H +LKP NI + + + DFGLA+ + + L S +P
Sbjct: 127 EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG- 182
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLK-VVKPSQKWDIYSYGVILLEMI 630
++ N +S +G+ Y A E L ++K D YS G+I E I
Sbjct: 183 --------------SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 122/323 (37%), Gaps = 73/323 (22%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 42 QVIEADAFGIDKTATX----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG----- 513
N+V L L+ I ++ G+L+T L K VP+ K
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF----VPYKDLYKDFLTLEHLI 147
Query: 514 -----IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
R+P + + APE++ + + D++S+GV+L E
Sbjct: 205 DARLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA 687
+ + G + V E + C K+ Y P+ + + +
Sbjct: 239 IFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLD 282
Query: 688 CVHSSPEKRPTMRHISDALDRLI 710
C H P +RPT + + L L+
Sbjct: 283 CWHGEPSQRPTFSELVEHLGNLL 305
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ E+ + +RH +I+ L S DE +++ +Y N +V +
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSE 112
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+ + I + Y H K VH DLKP N+LL ++ ++DFGL+ +
Sbjct: 113 QEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 162
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 72/192 (37%), Gaps = 53/192 (27%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + + H NIV L + LI +Y G + L HG+
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-------EKEA 116
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG---- 562
R K + I + Y H+ K+ VH DLK N+LL +M ++DFG + + G
Sbjct: 117 RSKF-RQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172
Query: 563 --GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620
G+P P P+ Q G Y PE D++
Sbjct: 173 FCGAP-------PYAAPELFQ-----------------GKKYDGPEV----------DVW 198
Query: 621 SYGVILLEMITG 632
S GVIL +++G
Sbjct: 199 SLGVILYTLVSG 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 50/235 (21%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQR---FKEFQTEVEAIGKIRHSNIVTLR 465
+LG G+ V+ L D +AV+ L ++ + F+ E + + H IV
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV--- 75
Query: 466 AYYWSVDEKL-------LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL 518
A Y + + + ++ +Y+ +L +H + P+ +++I + L
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQAL 129
Query: 519 VYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ H+ +H D+KP+NIL+ V DFG+AR +G S
Sbjct: 130 NFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS-------------- 172
Query: 579 ERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+++ +G+ Y +PE + + D+YS G +L E++TG
Sbjct: 173 ------------VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ E+ + +RH +I+ L S DE +++ +Y N +V +
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSE 111
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+ + I + Y H K VH DLKP N+LL ++ ++DFGL+ +
Sbjct: 112 QEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 124/320 (38%), Gaps = 72/320 (22%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
++++A+AF LGK VL+ +AV+ L KE +E++ + + +H
Sbjct: 61 KVVEATAFGLGKE------DAVLK----VAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGK--PGM-VSFTPV-----PWSVR--VK 509
NIV L L+I +Y G L L K PG+ S+ P S R +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+A+G+ +L + K +H D+ N+LL + + DFGLAR +I S +
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI-- 223
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
++ L + APES+ + + D++SYG++L E+
Sbjct: 224 ----------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
Query: 630 IT---GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAM 686
+ + V S LV K + P AP + I
Sbjct: 262 FSLGLNPYPGILVNSKFYKLV----------KDGYQMAQPAFAPK--------NIYSIMQ 303
Query: 687 ACVHSSPEKRPTMRHISDAL 706
AC P RPT + I L
Sbjct: 304 ACWALEPTHRPTFQQICSFL 323
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 187
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 188 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 224
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 225 LFPGTDHIDQWN 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A+ L E S + KE E
Sbjct: 42 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 159
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 160 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 212 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 245
Query: 629 MIT 631
++T
Sbjct: 246 LMT 248
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ E+ + +RH +I+ L S DE +++ +Y N +V +
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSE 102
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+ + I + Y H K VH DLKP N+LL ++ ++DFGL+ +
Sbjct: 103 QEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 152
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 445 EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPW 504
+ E+ + +RH +I+ L S DE +++ +Y N +V +
Sbjct: 54 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDY-------IVQRDKMSE 106
Query: 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+ + I + Y H K VH DLKP N+LL ++ ++DFGL+ +
Sbjct: 107 QEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 156
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S ++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEP------- 184
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
EV T YY+APE + + + DI+S G I+ EM+ +
Sbjct: 185 -----------EVVT--------RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 411 LGKSGIGIVYKVVLEDGHT-LAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG+ IVY+ + A++ L + ++ +TE+ + ++ H NI+ L+ +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
+ E L+ + + G L + K G S +K I + + YLHE
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEK-GYYSERDA-----ADAVKQILEAVAYLHE---NGI 169
Query: 530 VHGDLKPSNILLGH---NMEPHVSDFGLARLAN 559
VH DLKP N+L + ++DFGL+++
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWS-VDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
E+ + +++H N+++L+ + S D K+ L++DY + + + PV
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPV---- 123
Query: 507 RVKIIKGIAKGLVY-----LHEFSPKKYVHGDLKPSNIL-LGHNMEP---HVSDFGLARL 557
++ +G+ K L+Y +H +H DLKP+NIL +G E ++D G ARL
Sbjct: 124 --QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 558 AN 559
N
Sbjct: 182 FN 183
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRF--KEFQTEVEAIGKIRHSNIVTLRAY 467
+G+ G+V+K D G +A+++ E K E+ + +++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
+ L+++Y + L + G VP + I + + + H+ +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRG------VPEHLVKSITWQTLQAVNFCHKHN-- 122
Query: 528 KYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+H D+KP NIL+ + + DFG ARL
Sbjct: 123 -CIHRDVKPENILITKHSVIKLCDFGFARL 151
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 12 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 129
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFG A+L +
Sbjct: 130 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 182 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 215
Query: 629 MIT 631
++T
Sbjct: 216 LMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFG A+L +
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 180 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 213
Query: 629 MIT 631
++T
Sbjct: 214 LMT 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 486 LATALHGKPGMVSFTP---VPWSVRVKIIKGIAKGLVYLHEFSP--------KKYVHGDL 534
L TA H K + + + W+ + + +++GL YLHE P H D
Sbjct: 90 LITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDF 149
Query: 535 KPSNILLGHNMEPHVSDFGLA 555
K N+LL ++ ++DFGLA
Sbjct: 150 KSKNVLLKSDLTAVLADFGLA 170
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 119/314 (37%), Gaps = 66/314 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
++++A+AF LGK V KV AV+ L KE +E++ + + +H
Sbjct: 53 KVVEATAFGLGKEDA--VLKV--------AVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKP--GMVSFTPVPWSVR--VKIIKGIA 515
NIV L L+I +Y G L L K + P +R + +A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+G+ +L + K +H D+ N+LL + + DFGLAR +I S +
Sbjct: 163 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI-------- 209
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT---G 632
++ L + APES+ + + D++SYG++L E+ +
Sbjct: 210 ----------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 253
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V S LV K + P AP + I AC
Sbjct: 254 PYPGILVNSKFYKLV----------KDGYQMAQPAFAPK--------NIYSIMQACWALE 295
Query: 693 PEKRPTMRHISDAL 706
P RPT + I L
Sbjct: 296 PTHRPTFQQICSFL 309
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMTPYV---- 186
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ YY+APE + + + DI+S G I+ EMI G V
Sbjct: 187 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG--GV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 LFPGTDHIDQWN 235
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 31/119 (26%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSNI++ + + DFGLAR A+ +N M
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLARTAS---------TNFM----------------- 179
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVN 648
+ + YY+APE + + + DI+S G I+ E++ G +V+ G+ +D N
Sbjct: 180 ---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG--SVIFQGTDHIDQWN 233
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VL G VYK + + +G + A++ L E S + KE E
Sbjct: 8 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 178 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 211
Query: 629 MIT 631
++T
Sbjct: 212 LMT 214
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 49/234 (20%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
VLG+ G G V+ ++ G A ++L + ++ K +Q E + + K+ HS +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 466 AYYWSVDEKLLIYDYIPNGS-----LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
AY + L + I NG + PG + ++ + I GL +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEH 304
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
LH+ + ++ DLKP N+LL + +SD GLA
Sbjct: 305 LHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA------------------------- 336
Query: 581 QQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
V L+ T + G+ + APE L + D ++ GV L EMI R
Sbjct: 337 ----VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VL G VYK + + +G + A++ L E S + KE E
Sbjct: 15 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 185 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 218
Query: 629 MIT 631
++T
Sbjct: 219 LMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFG A+L +
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 180 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 213
Query: 629 MIT 631
++T
Sbjct: 214 LMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 125
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFG A+L +
Sbjct: 126 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 178 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 211
Query: 629 MIT 631
++T
Sbjct: 212 LMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 10 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 127
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFG A+L +
Sbjct: 128 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 180 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 213
Query: 629 MIT 631
++T
Sbjct: 214 LMT 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 119/314 (37%), Gaps = 66/314 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
++++A+AF LGK V KV AV+ L KE +E++ + + +H
Sbjct: 61 KVVEATAFGLGKEDA--VLKV--------AVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKP--GMVSFTPVPWSVR--VKIIKGIA 515
NIV L L+I +Y G L L K + P +R + +A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
+G+ +L + K +H D+ N+LL + + DFGLAR +I S +
Sbjct: 171 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMNDSNYI-------- 217
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT---G 632
++ L + APES+ + + D++SYG++L E+ +
Sbjct: 218 ----------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 261
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V S LV K + P AP + I AC
Sbjct: 262 PYPGILVNSKFYKLV----------KDGYQMAQPAFAPK--------NIYSIMQACWALE 303
Query: 693 PEKRPTMRHISDAL 706
P RPT + I L
Sbjct: 304 PTHRPTFQQICSFL 317
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 49/234 (20%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
VLG+ G G V+ ++ G A ++L + ++ K +Q E + + K+ HS +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 466 AYYWSVDEKLLIYDYIPNGS-----LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
AY + L + I NG + PG + ++ + I GL +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEH 304
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
LH+ + ++ DLKP N+LL + +SD GLA
Sbjct: 305 LHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA------------------------- 336
Query: 581 QQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
V L+ T + G+ + APE L + D ++ GV L EMI R
Sbjct: 337 ----VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 49/234 (20%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
VLG+ G G V+ ++ G A ++L + ++ K +Q E + + K+ HS +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 466 AYYWSVDEKLLIYDYIPNGS-----LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
AY + L + I NG + PG + ++ + I GL +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEH 304
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
LH+ + ++ DLKP N+LL + +SD GLA
Sbjct: 305 LHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA------------------------- 336
Query: 581 QQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
V L+ T + G+ + APE L + D ++ GV L EMI R
Sbjct: 337 ----VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 34/136 (25%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+++ +GL +LH VH DLKP NIL+ ++DFGLAR+ +
Sbjct: 125 LMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--------- 172
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
Q +++ V T +Y+APE L + D++S G I EM
Sbjct: 173 ------------QMALTPVVVTL--------WYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
Query: 630 ITGRTAVVQVGSSEMD 645
R + G+SE D
Sbjct: 213 F--RRKPLFCGNSEAD 226
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VL G VYK + + +G + A++ L E S + KE E
Sbjct: 15 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFGLA+L +
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 185 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 218
Query: 629 MIT 631
++T
Sbjct: 219 LMT 221
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 49/234 (20%)
Query: 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
VLG+ G G V+ ++ G A ++L + ++ K +Q E + + K+ HS +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSL 250
Query: 466 AYYWSVDEKLLIYDYIPNGS-----LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
AY + L + I NG + PG + ++ + I GL +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEH 304
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
LH+ + ++ DLKP N+LL + +SD GLA
Sbjct: 305 LHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA------------------------- 336
Query: 581 QQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
V L+ T + G+ + APE L + D ++ GV L EMI R
Sbjct: 337 ----VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 114 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 157
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 158 -SKALRADENXYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 205
Query: 628 EMIT 631
E +
Sbjct: 206 EAFS 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 41/224 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470
GK + YK + R+L + + + E+ + +RH +I+ L +
Sbjct: 22 FGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLYDVITT 80
Query: 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYV 530
+ +++ +Y G L + K M + + I + Y H K V
Sbjct: 81 PTDIVMVIEY-AGGELFDYIVEKKRMTE------DEGRRFFQQIICAIEYCHR---HKIV 130
Query: 531 HGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVT 590
H DLKP N+LL N+ ++DFGL+ NI L+
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLS---NIMTDGNFLK---------------------- 165
Query: 591 TTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGR 633
T+ S N Y APE + + + D++S G++L M+ GR
Sbjct: 166 TSCGSPN----YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 108 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 151
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 152 -SKALRADENYYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 199
Query: 628 EMIT 631
E +
Sbjct: 200 EAFS 203
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 400 LDELLKASAF----VLGKSGIGIVYK-VVLEDGHTL----AVRRLGEGGSQRF-KEFQTE 449
L +LK + F VLG G VYK + + +G + A++ L E S + KE E
Sbjct: 15 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 450 VEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALH-GKPGMVSFTPVPWSVRV 508
+ + + ++ L + +L I +P G L + K + S + W V+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ- 132
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568
IAKG+ YL + ++ VH DL N+L+ ++DFG A+L +
Sbjct: 133 -----IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628
++P K ++LE S L Y + + D++SYGV + E
Sbjct: 185 GGKVPI--------KWMALE-------SILHRIY-----------THQSDVWSYGVTVWE 218
Query: 629 MIT 631
++T
Sbjct: 219 LMT 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 34/136 (25%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+++ +GL +LH VH DLKP NIL+ ++DFGLAR+ +
Sbjct: 117 LMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--------- 164
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
Q +++ V T +Y+APE L + D++S G I EM
Sbjct: 165 ------------QMALAPVVVTL--------WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
Query: 630 ITGRTAVVQVGSSEMD 645
R + G+SE D
Sbjct: 205 F--RRKPLFCGNSEAD 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S ++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEP------- 184
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
EV T YY+APE + + + D++S G I+ EM+ +
Sbjct: 185 -----------EVVT--------RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 110 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 153
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 154 -SKALRADENYYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 201
Query: 628 EMIT 631
E +
Sbjct: 202 EAFS 205
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 516 KGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH-VSDFGLARLANIAGGSPTLQSNRMPA 574
K L +H+F VH D+KPSN L ++ + + DFGLA+ + + + +
Sbjct: 128 KALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH---DTKIELLKFVQS 181
Query: 575 EKPQER-QQKSVSLEVTTTNSSSNLGSY--YQAPESL-KVVKPSQKWDIYSYGVILLEMI 630
E QER Q S+ ++ + ++APE L K + D++S GVI L ++
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 631 TGR 633
+GR
Sbjct: 242 SGR 244
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 123/321 (38%), Gaps = 69/321 (21%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKI-RHS 459
++++A AF + K+ T+AV+ L EG + + +E++ + I H
Sbjct: 42 QVIEADAFGIDKTATX----------RTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 460 NIVTLRAYYWSVDEKLL-IYDYIPNGSLATALHGKPGMVSFTP--------VPWSVRVKI 510
N+V L L+ I ++ G+L+T L K F P + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKDLYKDFLTLEHLIXY 149
Query: 511 IKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSN 570
+AKG+ +L + +K +H DL NILL + DFGLAR
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 571 RMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
R+P + + APE++ + + D++S+GV+L E+
Sbjct: 207 RLPLK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
Query: 631 TGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDP-YLAPDADKEEEIIAVLKIAMACV 689
+ +G+S V + K + P Y P+ + + + C
Sbjct: 241 S-------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPE---------MYQTMLDCW 284
Query: 690 HSSPEKRPTMRHISDALDRLI 710
H P +RPT + + L L+
Sbjct: 285 HGEPSQRPTFSELVEHLGNLL 305
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 114 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 157
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 158 -SKALRADENYYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 205
Query: 628 EMIT 631
E +
Sbjct: 206 EAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL++
Sbjct: 120 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 165
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
A + E K+ T+ + Y APE + K S K D++S+GV++
Sbjct: 166 ------ALRADENYYKA------QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMW 211
Query: 628 EMIT 631
E +
Sbjct: 212 EAFS 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 41/227 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKIRHSNIVTLRA 466
LGK G Y++ D + ++ + ++ TE+ + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ D ++ + SL LH + V+ + +R I +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN--- 160
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+ +H DLK N+ L +M+ + DFGLA G ER++
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----------------ERKK---- 200
Query: 587 LEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
T + N Y APE L S + DI+S G IL ++ G+
Sbjct: 201 ----TLCGTPN----YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 34/136 (25%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+++ +GL +LH VH DLKP NIL+ ++DFGLAR+ +
Sbjct: 117 LMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--------- 164
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
Q ++ V T +Y+APE L + D++S G I EM
Sbjct: 165 ------------QMALDPVVVTL--------WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
Query: 630 ITGRTAVVQVGSSEMD 645
R + G+SE D
Sbjct: 205 F--RRKPLFCGNSEAD 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL++
Sbjct: 130 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 175
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
A + E K+ T+ + Y APE + K S K D++S+GV++
Sbjct: 176 ------ALRADENYYKA------QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMW 221
Query: 628 EMIT 631
E +
Sbjct: 222 EAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL++
Sbjct: 130 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 175
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
A + E K+ T+ + Y APE + K S K D++S+GV++
Sbjct: 176 ------ALRADENYYKA------QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMW 221
Query: 628 EMIT 631
E +
Sbjct: 222 EAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 128 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 171
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 172 -SKALRADENYYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 219
Query: 628 EMIT 631
E +
Sbjct: 220 EAFS 223
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 49/218 (22%)
Query: 427 GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKL-------LIYD 479
G ++A++++ + R +E Q ++ + + H NIV L++Y++++ E+ ++ +
Sbjct: 48 GMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106
Query: 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539
Y+P+ + V+ P P ++V + + I + + LH H D+KP N+
Sbjct: 107 YVPDTLHRCCRNYYRRQVA--PPPILIKVFLFQLI-RSIGCLH-LPSVNVCHRDIKPHNV 162
Query: 540 LLGH-NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL 598
L+ + + DFG A+ L + N +
Sbjct: 163 LVNEADGTLKLCDFGSAK-----------------------------KLSPSEPNVAYIC 193
Query: 599 GSYYQAPESLKVVKPSQKW----DIYSYGVILLEMITG 632
YY+APE ++ +Q + DI+S G I EM+ G
Sbjct: 194 SRYYRAPE---LIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ E+ + H ++V ++ D ++ + SL LH + ++
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEAR 120
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
+ +R I G YLH + +H DLK N+ L ++E + DFGLA G
Sbjct: 121 YYLR-----QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 171
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
ER++ T + N Y APE L S + D++S G
Sbjct: 172 ---------------ERKK--------TLCGTPN----YIAPEVLSKKGHSFEVDVWSIG 204
Query: 624 VILLEMITGR 633
I+ ++ G+
Sbjct: 205 CIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ E+ + H ++V ++ D ++ + SL LH + ++
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEAR 120
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
+ +R I G YLH + +H DLK N+ L ++E + DFGLA G
Sbjct: 121 YYLR-----QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 171
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
ER++ T + N Y APE L S + D++S G
Sbjct: 172 ---------------ERKK--------TLCGTPN----YIAPEVLSKKGHSFEVDVWSIG 204
Query: 624 VILLEMITGR 633
I+ ++ G+
Sbjct: 205 CIMYTLLVGK 214
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 116/307 (37%), Gaps = 77/307 (25%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEF--------QTEVEAIGKIRHSNIV 462
+G+ G+V +V +E+ T A+R + + ++ +TEV + K+ H NI
Sbjct: 34 IGQGSYGVV-RVAIEN-QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 463 TLRAYYWSVDEKLLIYDYIPNGSLATALH-------GKPGM----VSFTPVP-------- 503
L Y L+ + G L L+ GK M P P
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 504 -----------WSVRVKIIKGIAKGLV-YLHEFSPKKYVHGDLKPSNILLGHN--MEPHV 549
+ R K+I I + + LH + H D+KP N L N E +
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK 609
DFGL++ + + + TT + + Y+ APE L
Sbjct: 212 VDFGLSK---------------------EFYKLNNGEYYGMTTKAGT---PYFVAPEVLN 247
Query: 610 VVKPSQ--KWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWM---QLCIEEKKPLADVL 664
S K D +S GV+L ++ G AV G ++ D ++ + +LC E P +VL
Sbjct: 248 TTNESYGPKCDAWSAGVLLHLLLMG--AVPFPGVNDADTISQVLNKKLCFE--NPNYNVL 303
Query: 665 DPYLAPD 671
P LA D
Sbjct: 304 SP-LARD 309
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 47/185 (25%)
Query: 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAK 516
+H NI+TL+ Y L+ + + G L + + F+ S ++ I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK---FFSEREASF---VLHTIGK 132
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLARLANIAGG---SPTLQS 569
+ YLH + VH DLKPSNIL G+ + DFG A+ G +P +
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
N + APE LK + DI+S G++L M
Sbjct: 190 N-------------------------------FVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 630 ITGRT 634
+ G T
Sbjct: 219 LAGYT 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ E+ + H ++V ++ D ++ + SL LH + ++
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEAR 124
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
+ +R I G YLH + +H DLK N+ L ++E + DFGLA G
Sbjct: 125 YYLR-----QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 175
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
ER++ T + N Y APE L S + D++S G
Sbjct: 176 ---------------ERKK--------TLCGTPN----YIAPEVLSKKGHSFEVDVWSIG 208
Query: 624 VILLEMITGR 633
I+ ++ G+
Sbjct: 209 CIMYTLLVGK 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 31/121 (25%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I GL +LH K V+ DLK NILL + ++DFG+ + N+ G + T + P
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNEFCGTP 183
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
Y APE L K + D +S+GV+L EM+ G+
Sbjct: 184 D---------------------------YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
Query: 634 T 634
+
Sbjct: 217 S 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKIRHSNIVTLRA 466
LGK G Y++ D + ++ + ++ TE+ + + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ D ++ + SL LH + V+ + +R I +G+ YLH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN--- 144
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+ +H DLK N+ L +M+ + DFGLA G ER++
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----------------ERKKDLCG 188
Query: 587 LEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
T N Y APE L S + DI+S G IL ++ G+
Sbjct: 189 ----TPN--------YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 472 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 515
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 516 -SKALRADENYYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 563
Query: 628 EMIT 631
E +
Sbjct: 564 EAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ ++ G+ YL E +VH DL N+LL +SDFGL
Sbjct: 473 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL------------- 516
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
S + A++ + Q V + APE + K S K D++S+GV++
Sbjct: 517 -SKALRADENYYKAQTHGKWPVK-----------WYAPECINYYKFSSKSDVWSFGVLMW 564
Query: 628 EMIT 631
E +
Sbjct: 565 EAFS 568
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ Y+H +H DLKP+N L+ + V DFGLAR + P ++++P
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY----PENGNSQLPI-S 219
Query: 577 PQERQQKSVSLEVTTTNSSSNLG----SYYQAPESLKVVKP-SQKWDIYSYGVILLEMI 630
P+E V+ T G +Y+APE + + + ++ D++S G I E++
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYW 469
+GK G V++ L G ++AV+ Q F+E TE+ +RH NI+ A
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 470 ----SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE-- 523
S + LI Y +GSL L + + P + +++ A GL +LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQRQ----TLEP---HLALRLAVSAACGLAHLHVEI 125
Query: 524 FSPK---KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA------GGSPTLQSNRMPA 574
F + H D K N+L+ N++ ++D GLA + + G +P + + R A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 575 EKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW-DIYSYGVILLEMITGR 633
+ + Q ++ E S KW DI+++G++L E I R
Sbjct: 186 PEVLDEQIRTDCFE-------------------------SYKWTDIWAFGLVLWE-IARR 219
Query: 634 TAV 636
T V
Sbjct: 220 TIV 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 120/323 (37%), Gaps = 57/323 (17%)
Query: 390 VPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTL-AVRRLGEGGSQRFK-EFQ 447
VP D V D +L +G+ G V+ L +TL AV+ E K +F
Sbjct: 104 VPKDKWVLNHEDLVLGEQ---IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL 160
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + H NIV L ++ + + G T L + + +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL----- 215
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ A G+ YL K +H DL N L+ +SDFG++R + +
Sbjct: 216 LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
++P + + APE+L + S + D++S+G++L
Sbjct: 273 GLRQVPVK--------------------------WTAPEALNYGRYSSESDVWSFGILLW 306
Query: 628 EMITGRTAVVQVGSSEM-DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAM 686
E + +G+S +L N EK + P L PD AV ++
Sbjct: 307 ETFS-------LGASPYPNLSNQQTREFVEKG--GRLPCPELCPD--------AVFRLME 349
Query: 687 ACVHSSPEKRPTMRHISDALDRL 709
C P +RP+ I L +
Sbjct: 350 QCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A +N M
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAC---------TNFM---- 181
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636
+ + YY+APE + + + DI+S G I+ E++ G V
Sbjct: 182 ----------------MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG--CV 223
Query: 637 VQVGSSEMDLVN 648
+ G+ +D N
Sbjct: 224 IFQGTDHIDQWN 235
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 47/185 (25%)
Query: 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAK 516
+H NI+TL+ Y L+ + + G L + + F+ S ++ I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK---FFSEREASF---VLHTIGK 132
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLARLANIAGG---SPTLQS 569
+ YLH + VH DLKPSNIL G+ + DFG A+ G +P +
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
N + APE LK + DI+S G++L M
Sbjct: 190 N-------------------------------FVAPEVLKRQGYDEGCDIWSLGILLYTM 218
Query: 630 ITGRT 634
+ G T
Sbjct: 219 LAGYT 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + +K +H DL NILL + DFGLAR R+P
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632
+ + APE++ + + D++S+GV+L E+ + G
Sbjct: 257 LK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 290
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V E + C K+ Y P+ + + + C H
Sbjct: 291 ASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGE 334
Query: 693 PEKRPTMRHISDALDRLI 710
P +RPT + + L L+
Sbjct: 335 PSQRPTFSELVEHLGNLL 352
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKIRHSNIVTLRA 466
LGK G Y++ D + ++ + ++ TE+ + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ D ++ + SL LH + V+ + +R I +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN--- 160
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+ +H DLK N+ L +M+ + DFGLA G ER++
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----------------ERKKDLCG 204
Query: 587 LEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
T N Y APE L S + DI+S G IL ++ G+
Sbjct: 205 ----TPN--------YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 34/136 (25%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
+++ +GL +LH VH DLKP NIL+ ++DFGLAR+ +
Sbjct: 117 LMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--------- 164
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
Q + VT +Y+APE L + D++S G I EM
Sbjct: 165 -----------QMALFPVVVTL---------WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
Query: 630 ITGRTAVVQVGSSEMD 645
R + G+SE D
Sbjct: 205 F--RRKPLFCGNSEAD 218
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + +K +H DL NILL + DFGLAR R+P
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632
+ + APE++ + + D++S+GV+L E+ + G
Sbjct: 259 LK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 292
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V E + C K+ Y P+ + + + C H
Sbjct: 293 ASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGE 336
Query: 693 PEKRPTMRHISDALDRLI 710
P +RPT + + L L+
Sbjct: 337 PSQRPTFSELVEHLGNLL 354
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKIRHSNIVTLRA 466
LGK G Y++ D + ++ + ++ TE+ + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP 526
++ D ++ + SL LH + V+ + +R I +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHN--- 160
Query: 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVS 586
+ +H DLK N+ L +M+ + DFGLA G ER++
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----------------ERKKXLCG 204
Query: 587 LEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
T N Y APE L S + DI+S G IL ++ G+
Sbjct: 205 ----TPN--------YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 15/145 (10%)
Query: 499 FTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
F P K+ I K + +LH K H DLKP NIL SD+ A
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQ------SDYTEAYNP 162
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWD 618
I TL + P K + + E +T S+ +Y+APE + + SQ D
Sbjct: 163 KIKRDERTLIN---PDIKVVDFGSATYDDEHHSTLVSTR---HYRAPEVILALGWSQPCD 216
Query: 619 IYSYGVILLEMITGRTAVVQVGSSE 643
++S G IL+E G T S E
Sbjct: 217 VWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 261 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 312 MRTLCGTPT 320
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 21/154 (13%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
+GK +V + V L GH A + + ++ ++ + E ++HSNIV L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHD- 70
Query: 468 YWSVDEK---LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEF 524
S+ E+ L++D + G L +V+ + I+ I + +++ H+
Sbjct: 71 --SISEEGFHYLVFDLVTGGELFE------DIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 525 SPKKYVHGDLKPSNILLGHNME---PHVSDFGLA 555
VH DLKP N+LL + ++DFGLA
Sbjct: 123 G---VVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 116/318 (36%), Gaps = 66/318 (20%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V + V + G A + + ++ F++ + E K++H NIV L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
L++D + G L +V+ + I+ I + + Y H
Sbjct: 97 IQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQQILESIAYCHS---N 147
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
VH +LKP N+LL + ++DFGLA
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLA----------------------------- 178
Query: 585 VSLEVTTTNSSSNLGSY--YQAPESLKVVKPSQKWDIYSYGVILLEMITGR--------- 633
+EV + + Y +PE LK S+ DI++ GVIL ++ G
Sbjct: 179 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236
Query: 634 --TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHS 691
A ++ G+ + W + E K ++D L + K LK+ C
Sbjct: 237 RLYAQIKAGAYDYPSPEWDTVTPEAK----SLIDSMLTVNPKKRITADQALKVPWIC--- 289
Query: 692 SPEKRPTMRHISDALDRL 709
+ E+ + H D +D L
Sbjct: 290 NRERVASAIHRQDTVDCL 307
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 247 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 298 MRTLCGTPT 306
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + +K +H DL NILL + DFGLAR R+P
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632
+ + APE++ + + D++S+GV+L E+ + G
Sbjct: 264 LK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 297
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V E + C K+ Y P+ + + + C H
Sbjct: 298 ASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGE 341
Query: 693 PEKRPTMRHISDALDRLI 710
P +RPT + + L L+
Sbjct: 342 PSQRPTFSELVEHLGNLL 359
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 121/327 (37%), Gaps = 79/327 (24%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE-FQTEVEAIGKI-RHS 459
++++A+AF LGK V KV AV+ L KE +E++ + + +H
Sbjct: 46 KVVEATAFGLGKEDA--VLKV--------AVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 460 NIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMV---SFTP------------VPW 504
NIV L L+I +Y G L L K + S P P
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 505 SVR--VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562
+R + +A+G+ +L + K +H D+ N+LL + + DFGLAR +I
Sbjct: 156 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--DIMN 210
Query: 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622
S + ++ L + APES+ + + D++SY
Sbjct: 211 DSNYI------------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSY 246
Query: 623 GVILLEMIT---GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEII 679
G++L E+ + + V S LV K + P AP
Sbjct: 247 GILLWEIFSLGLNPYPGILVNSKFYKLV----------KDGYQMAQPAFAPK-------- 288
Query: 680 AVLKIAMACVHSSPEKRPTMRHISDAL 706
+ I AC P RPT + I L
Sbjct: 289 NIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
+AKG+ +L + +K +H DL NILL + DFGLAR R+P
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632
+ + APE++ + + D++S+GV+L E+ + G
Sbjct: 266 LK--------------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 299
Query: 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692
+ V E + C K+ Y P+ + + + C H
Sbjct: 300 ASPYPGVKIDE-------EFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGE 343
Query: 693 PEKRPTMRHISDALDRLI 710
P +RPT + + L L+
Sbjct: 344 PSQRPTFSELVEHLGNLL 361
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 224
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ YY+APE + + + DI+S G I+ EM+ +
Sbjct: 225 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 122 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 173 MRTLCGTPT 181
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 122 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 173 MRTLCGTPT 181
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 122 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 173 MRTLCGTPT 181
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 121 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 172 MRTLCGTPT 180
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN------IAGG 563
I+ + G ++HE +H DLKP+N LL + + DFGLAR N I
Sbjct: 136 ILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVND 192
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSY 622
+ N P + +++ S VT +Y+APE + + + + DI+S
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVT---------RWYRAPELILLQENYTNSIDIWST 243
Query: 623 GVILLEMI 630
G I E++
Sbjct: 244 GCIFAELL 251
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 120/323 (37%), Gaps = 57/323 (17%)
Query: 390 VPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTL-AVRRLGEGGSQRFK-EFQ 447
VP D V D +L +G+ G V+ L +TL AV+ E K +F
Sbjct: 104 VPKDKWVLNHEDLVLGEQ---IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL 160
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
E + + H NIV L ++ + + G T L + + +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL----- 215
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++++ A G+ YL K +H DL N L+ +SDFG++R + +
Sbjct: 216 LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627
++P + + APE+L + S + D++S+G++L
Sbjct: 273 GLRQVPVK--------------------------WTAPEALNYGRYSSESDVWSFGILLW 306
Query: 628 EMITGRTAVVQVGSSEM-DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAM 686
E + +G+S +L N EK + P L PD AV ++
Sbjct: 307 ETFS-------LGASPYPNLSNQQTREFVEKG--GRLPCPELCPD--------AVFRLME 349
Query: 687 ACVHSSPEKRPTMRHISDALDRL 709
C P +RP+ I L +
Sbjct: 350 QCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 29/104 (27%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM---------------------- 182
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 183 ----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ E+ + H ++V ++ D ++ + SL LH + ++
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEAR 144
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
+ +R I G YLH + +H DLK N+ L ++E + DFGLA G
Sbjct: 145 YYLR-----QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 195
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
ER++ + T N Y APE L S + D++S G
Sbjct: 196 ---------------ERKK----VLCGTPN--------YIAPEVLSKKGHSFEVDVWSIG 228
Query: 624 VILLEMITGR 633
I+ ++ G+
Sbjct: 229 CIMYTLLVGK 238
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 79/216 (36%), Gaps = 55/216 (25%)
Query: 427 GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
G +AVR + + S ++ EV + + H NIV L + L+ +Y G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 485 SLATAL--HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542
+ L HG+ R K + I + Y H+ K VH DLK N+LL
Sbjct: 99 EVFDYLVAHGRMK-------EKEARAKF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 543 HNMEPHVSDFGLARLANIAG------GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSS 596
+M ++DFG + GSP P P+ Q
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFCGSP-------PYAAPELFQ--------------- 185
Query: 597 NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
G Y PE D++S GVIL +++G
Sbjct: 186 --GKKYDGPEV----------DVWSLGVILYTLVSG 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 79/216 (36%), Gaps = 55/216 (25%)
Query: 427 GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484
G +AVR + + S ++ EV + + H NIV L + L+ +Y G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 485 SLATAL--HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542
+ L HG+ R K + I + Y H+ K VH DLK N+LL
Sbjct: 99 EVFDYLVAHGRMK-------EKEARAKF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 543 HNMEPHVSDFGLARLANIAG------GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSS 596
+M ++DFG + GSP P P+ Q
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDEFCGSP-------PYAAPELFQ--------------- 185
Query: 597 NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
G Y PE D++S GVIL +++G
Sbjct: 186 --GKKYDGPEV----------DVWSLGVILYTLVSG 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I GL +LH K V+ DLK NILL + ++DFG+ + N+ G + T P
Sbjct: 127 IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNXFCGTP 182
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
Y APE L K + D +S+GV+L EM+ G+
Sbjct: 183 D---------------------------YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
Query: 634 T 634
+
Sbjct: 216 S 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ E+ + H ++V ++ D ++ + SL LH + ++
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEAR 142
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
+ +R I G YLH + +H DLK N+ L ++E + DFGLA G
Sbjct: 143 YYLR-----QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 193
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
ER++ + T N Y APE L S + D++S G
Sbjct: 194 ---------------ERKK----VLCGTPN--------YIAPEVLSKKGHSFEVDVWSIG 226
Query: 624 VILLEMITGR 633
I+ ++ G+
Sbjct: 227 CIMYTLLVGK 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 444 KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503
++ E+ + H ++V ++ D ++ + SL LH + ++
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEAR 118
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563
+ +R I G YLH + +H DLK N+ L ++E + DFGLA G
Sbjct: 119 YYLR-----QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 169
Query: 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623
ER++ + T N Y APE L S + D++S G
Sbjct: 170 ---------------ERKK----VLCGTPN--------YIAPEVLSKKGHSFEVDVWSIG 202
Query: 624 VILLEMITGR 633
I+ ++ G+
Sbjct: 203 CIMYTLLVGK 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 29/104 (27%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM---------------------- 182
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 183 ----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
+TE+E + K+ H I+ ++ ++ ++ ++ + + G L + G + T +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR------L 557
++ + + YLHE +H DLKP N+LL E ++DFG ++ L
Sbjct: 128 QMLL------AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 558 ANIAGGSPT 566
G+PT
Sbjct: 179 MRTLCGTPT 187
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 48/230 (20%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V + V + G A + + ++ F++ + E K++H NIV L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
L++D + G L +V+ + I+ I + + Y H
Sbjct: 73 IQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQQILESIAYCHS---N 123
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
VH +LKP N+LL + ++DFGLA
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLA----------------------------- 154
Query: 585 VSLEVTTTNSSSNLGSY--YQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+EV + + Y +PE LK S+ DI++ GVIL ++ G
Sbjct: 155 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 224
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ YY+APE + + + DI+S G I+ EM+ +
Sbjct: 225 ---------------------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 48/230 (20%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V + V + G A + + ++ F++ + E K++H NIV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
L++D + G L +V+ + I+ I + + Y H
Sbjct: 74 IQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQQILESIAYCHS---N 124
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
VH +LKP N+LL + ++DFGLA
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLA----------------------------- 155
Query: 585 VSLEVTTTNSSSNLGSY--YQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+EV + + Y +PE LK S+ DI++ GVIL ++ G
Sbjct: 156 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 176
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 177 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Query: 66 VVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFS 125
V + + K K+ L S TDL + L N+ L L L N F
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FL 335
Query: 126 GSVPNEIGK-LKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGL 184
GS+ + + + L L++LDLS N S + LK L L N +P+G L
Sbjct: 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRL 394
Query: 185 VSLEKLNLSFNKFNGSIP 202
SL+K+ L N ++ S P
Sbjct: 395 TSLQKIWLHTNPWDCSCP 412
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 90 LRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFN 149
++ +L +K F L L+ L L N + N L +L L+LSQNF
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL- 335
Query: 150 GSLPVSIVQ-CKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNT-GN 207
GS+ + + +L+ LDLS N+ F GL +L++L L N+ S+P
Sbjct: 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSF-LGLPNLKELALDTNQLK-SVPDGIFDR 393
Query: 208 LSSLQ 212
L+SLQ
Sbjct: 394 LTSLQ 398
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 117 LVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPL 176
LV+ N+F G I KL Y Q L L FNG L+ L L+Q N G +
Sbjct: 68 LVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNG--------LANLEVLTLTQCNLDGAV 119
Query: 177 PNG-FGSGLVSLEKLNLSFNKFNGSIPS 203
+G F L SLE L L N P+
Sbjct: 120 LSGNFFKPLTSLEMLVLRDNNIKKIQPA 147
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 181
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 182 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 183
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 184 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 182
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 183 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 48/230 (20%)
Query: 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V + V + G A + + ++ F++ + E K++H NIV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
L++D + G L +V+ + I+ I + + Y H
Sbjct: 74 IQEESFHYLVFDLVTGGELFE------DIVAREFYSEADASHCIQQILESIAYCHS---N 124
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584
VH +LKP N+LL + ++DFGLA
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLA----------------------------- 155
Query: 585 VSLEVTTTNSSSNLGSY--YQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+EV + + Y +PE LK S+ DI++ GVIL ++ G
Sbjct: 156 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM--------- 182
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 183 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 29/104 (27%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM---------------------- 176
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 177 ----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 183
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 184 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 72/187 (38%), Gaps = 38/187 (20%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSV 506
Q E G+++ ++V + + +D +L + + NG A + G P+
Sbjct: 82 QREARTAGRLQEPHVVPIHDF-GEIDGQLYVDXRLINGVDLAAXLRRQG-----PLAPPR 135
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
V I++ I L H D+KP NIL+ + ++ DFG+A
Sbjct: 136 AVAIVRQIGSALD---AAHAAGATHRDVKPENILVSADDFAYLVDFGIA----------- 181
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVI 625
S + + T + +G+ YY APE + + DIY+ +
Sbjct: 182 -----------------SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCV 224
Query: 626 LLEMITG 632
L E +TG
Sbjct: 225 LYECLTG 231
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM--------- 182
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 183 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 29/104 (27%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM---------------------- 175
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 176 ----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 29/104 (27%)
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589
+H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM---------------------- 175
Query: 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 176 ----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 70/192 (36%), Gaps = 53/192 (27%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + + H NIV L + L+ +Y G + L HG+
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-------EKEA 116
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG---- 562
R K + I + Y H+ K VH DLK N+LL +M ++DFG + +
Sbjct: 117 RAKF-RQIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT 172
Query: 563 --GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620
GSP P P+ Q G Y PE D++
Sbjct: 173 FCGSP-------PYAAPELFQ-----------------GKKYDGPEV----------DVW 198
Query: 621 SYGVILLEMITG 632
S GVIL +++G
Sbjct: 199 SLGVILYTLVSG 210
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR AG S +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM--------- 182
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ + YY+APE + + + DI+S G I+ EM+ +
Sbjct: 183 -----------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 141 LDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLV-----SLEKLNLSFN 195
L+ +QN F S+ KRL+ L L +N L N F L+ SLE L++S N
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNG----LKNFFKVALMTKNMSSLETLDVSLN 413
Query: 196 KFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253
N T + ++ S N+ +GS+ LP KV + +NN IP++
Sbjct: 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSV---FRCLPPKVKVLDLHNNRIMSIPKD 468
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 37/173 (21%)
Query: 461 IVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
+ L + + +VD + +Y+ G L + V ++ + I GL +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFF 135
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
LH+ + ++ DLK N++L ++DFG+ + + G
Sbjct: 136 LHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG------------------ 174
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
VTT Y APE + + D ++YGV+L EM+ G+
Sbjct: 175 --------VTTREFCGTPD--YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 121/328 (36%), Gaps = 52/328 (15%)
Query: 399 DLDELLKASAFVLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR 457
+L EL VL + G VY+ + G A++RL ++ + EV + K+
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 458 -HSNIVTL-------RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVK 509
H NIV + + + L+ + G L L M S P+ +K
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK---MESRGPLSCDTVLK 140
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQS 569
I + + ++H P +H DLK N+LL + + DFG A
Sbjct: 141 IFYQTCRAVQHMHRQKPP-IIHRDLKVENLLLSNQGTIKLCDFGSATTI----------- 188
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVIL 626
+ P +++ V E+T N Y+ PE + + +K DI++ G IL
Sbjct: 189 SHYPDYSWSAQRRALVEEEIT-----RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
Query: 627 LEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAM 686
L+ + Q E+ L V Y P D + + L AM
Sbjct: 244 Y------------------LLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAM 285
Query: 687 ACVHSSPEKRPTMRHISDALDRLIVSSD 714
V +PE+R ++ + L + + +
Sbjct: 286 LQV--NPEERLSIAEVVHQLQEIAAARN 311
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 18/76 (23%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-------------GHNMEPHVSDFGL 554
+ +++ IA G+ +LH K +H DLKP NIL+ N+ +SDFGL
Sbjct: 118 ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 555 ARLANIAGGSPTLQSN 570
+ + G + ++N
Sbjct: 175 CK--KLDSGQSSFRTN 188
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 9/151 (5%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
++GK G VY + + + + K F+ EV A + RH N+V
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
S +I +L + + ++ +I + I KG+ YLH K
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-----QIAQEIVKGMGYLH---AKGI 151
Query: 530 VHGDLKPSNILLGHNMEPHVSDFGLARLANI 560
+H DLK N+ N + ++DFGL ++ +
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 47/185 (25%)
Query: 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAK 516
+H NI+TL+ Y ++ + + G L + + F+ S ++ I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK---FFSEREASA---VLFTITK 127
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLARLANIAGG---SPTLQS 569
+ YLH + VH DLKPSNIL G+ + DFG A+ G +P +
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA 184
Query: 570 NRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629
N + APE L+ DI+S GV+L M
Sbjct: 185 N-------------------------------FVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 630 ITGRT 634
+TG T
Sbjct: 214 LTGYT 218
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 57/271 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTL---- 464
++G+ G G VY D G A++ L + +R K Q E A+ + ++V+
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCP 251
Query: 465 ----RAYYWSVDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV 519
+Y + +KL I D + G L L + G+ S + + I+ GL
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIIL-----GLE 305
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
++H + V+ DLKP+NILL + +SD GLA
Sbjct: 306 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA------------------------ 338
Query: 580 RQQKSVSLEVTTTNSSSNLGSY-YQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+ + +++G++ Y APE L K V D +S G +L +++ G +
Sbjct: 339 -------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 391
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYL 668
Q + + ++ M L + + P D P L
Sbjct: 392 QHKTKDKHEIDRMTLTMAVELP--DSFSPEL 420
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 57/271 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTL---- 464
++G+ G G VY D G A++ L + +R K Q E A+ + ++V+
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 465 ----RAYYWSVDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV 519
+Y + +KL I D + G L L + G+ S + + I+ GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIIL-----GLE 306
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
++H + V+ DLKP+NILL + +SD GLA
Sbjct: 307 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA------------------------ 339
Query: 580 RQQKSVSLEVTTTNSSSNLGSY-YQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+ + +++G++ Y APE L K V D +S G +L +++ G +
Sbjct: 340 -------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
Query: 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYL 668
Q + + ++ M L + + P D P L
Sbjct: 393 QHKTKDKHEIDRMTLTMAVELP--DSFSPEL 421
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 37/137 (27%)
Query: 502 VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA-RLANI 560
+P + KI K L +L E K +H D+KPSNILL + + DFG++ +L +
Sbjct: 122 IPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD- 178
Query: 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW--- 617
++ R +P Y APE + Q +
Sbjct: 179 -----SIAKTRDAGCRP------------------------YMAPERIDPSASRQGYDVR 209
Query: 618 -DIYSYGVILLEMITGR 633
D++S G+ L E+ TGR
Sbjct: 210 SDVWSLGITLYELATGR 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRL-------GEGGSQRFKEFQTEVEAIGKIRHSNIV 462
LG+ G VYK + T+A++R+ G G+ EV + +++H NI+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA-----IREVSLLKELQHRNII 96
Query: 463 TLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522
L++ LI++Y N L + P V +++IK L+
Sbjct: 97 ELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP----------DVSMRVIKSFLYQLINGV 145
Query: 523 EF-SPKKYVHGDLKPSNILLGHNMEPH-----VSDFGLARLANIAGGSPTLQ 568
F ++ +H DLKP N+LL + + DFGLAR A G P Q
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR----AFGIPIRQ 193
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 53/192 (27%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + + H NIV L + L+ +Y G + L HG+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-------EKEA 115
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG---- 562
R K + I + Y H+ K VH DLK N+LL +M ++DFG +
Sbjct: 116 RAKF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 563 --GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620
GSP P P+ Q G Y PE D++
Sbjct: 172 FCGSP-------PYAAPELFQ-----------------GKKYDGPEV----------DVW 197
Query: 621 SYGVILLEMITG 632
S GVIL +++G
Sbjct: 198 SLGVILYTLVSG 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 180
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ YY+APE + + + D++S G I+ EM+ +
Sbjct: 181 ---------------------VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 32/117 (27%)
Query: 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEK 576
G+ +LH +H DLKPSNI++ + + DFGLAR A G+ + + +
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYV---- 191
Query: 577 PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
+ YY+APE + + + D++S G I+ EM+ +
Sbjct: 192 ---------------------VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 55/257 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTL---- 464
++G+ G G VY D G A++ L + +R K Q E A+ + ++V+
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 465 ----RAYYWSVDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV 519
+Y + +KL I D + G L L + G+ S + + I+ GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIIL-----GLE 306
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
++H + V+ DLKP+NILL + +SD GLA
Sbjct: 307 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA------------------------ 339
Query: 580 RQQKSVSLEVTTTNSSSNLGSY-YQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+ + +++G++ Y APE L K V D +S G +L +++ G +
Sbjct: 340 -------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
Query: 638 QVGSSEMDLVNWMQLCI 654
Q + + ++ M L +
Sbjct: 393 QHKTKDKHEIDRMTLTM 409
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 55/257 (21%)
Query: 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTL---- 464
++G+ G G VY D G A++ L + +R K Q E A+ + ++V+
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 465 ----RAYYWSVDEKL-LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV 519
+Y + +KL I D + G L L + G+ S + + I+ GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIIL-----GLE 306
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579
++H + V+ DLKP+NILL + +SD GLA
Sbjct: 307 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA------------------------ 339
Query: 580 RQQKSVSLEVTTTNSSSNLGSY-YQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAVV 637
+ + +++G++ Y APE L K V D +S G +L +++ G +
Sbjct: 340 -------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
Query: 638 QVGSSEMDLVNWMQLCI 654
Q + + ++ M L +
Sbjct: 393 QHKTKDKHEIDRMTLTM 409
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 499 FTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558
F P K+ I K + +LH K H DLKP NIL SD+ A
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQ------SDYTEAYNP 162
Query: 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWD 618
I TL + P K + + E +S+ +Y+APE + + SQ D
Sbjct: 163 KIKRDERTLIN---PDIKVVDFGSATYDDE---HHSTLVXXRHYRAPEVILALGWSQPCD 216
Query: 619 IYSYGVILLEMITGRTAVVQVGSSE 643
++S G IL+E G T S E
Sbjct: 217 VWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 53/192 (27%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + + H NIV L + L+ +Y G + L HG+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-------EKEA 115
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG---- 562
R K + I + Y H+ K VH DLK N+LL +M ++DFG +
Sbjct: 116 RAKF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 563 --GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620
GSP P P+ Q G Y PE D++
Sbjct: 172 FCGSP-------PYAAPELFQ-----------------GKKYDGPEV----------DVW 197
Query: 621 SYGVILLEMITG 632
S GVIL +++G
Sbjct: 198 SLGVILYTLVSG 209
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 46/229 (20%)
Query: 79 FLPSALGSLTDLRHVNLRNNKFFGSLPLEL--LEAQGLQSLVLYGNSFSGSVPNEIGKLK 136
+L + G L L+ ++ +N+ F EL L+ + L L NS V + GK
Sbjct: 139 YLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCM 198
Query: 137 ------YLQILDLSQNFFN----GSLPVSIVQCKRLKAL----------------DLSQN 170
L+ILD+S N + G+ +I + + + D QN
Sbjct: 199 NPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258
Query: 171 NFTG---------PLPNGFGSGLVS--------LEKLNLSFNKFNGSIPSNTGNLSSLQG 213
F G L +GF L S L+ LNL++NK N L +LQ
Sbjct: 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ- 317
Query: 214 TVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPT 262
++ S+NL ++ LP+ YIDL N+++ Q + + T
Sbjct: 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 48/242 (19%)
Query: 402 ELLKASAFVLGKSGIGIVYKVVLEDG-HTLAVRRLGEGGSQRFKE---FQTEVEAIGKIR 457
E+LK V+G+ G V V L++ A++ L + + E F+ E + +
Sbjct: 77 EILK----VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD 132
Query: 458 HSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKG 517
I TL + + L+ DY G L T L + P + + +
Sbjct: 133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-----PEEMARFYLAEMVIA 187
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577
+ +H+ YVH D+KP NIL+ N ++DFG + L + G T+QS
Sbjct: 188 IDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDG--TVQS-------- 233
Query: 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQ-----KWDIYSYGVILLEMITG 632
S+ V T + Y +PE L+ ++ + + D +S GV + EM+ G
Sbjct: 234 --------SVAVGTPD--------YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
Query: 633 RT 634
T
Sbjct: 278 ET 279
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 120/309 (38%), Gaps = 74/309 (23%)
Query: 410 VLGKSGIG-IVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468
VLG G IVY+ + ++ R L E S +E Q E+ H N++ Y+
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD---EHPNVIR---YF 84
Query: 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK 528
+ EK + YI A L F + + +++ GL +LH +
Sbjct: 85 CT--EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLHSLN--- 138
Query: 529 YVHGDLKPSNILLGH-----NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
VH DLKP NIL+ ++ +SDFGL + + S + +S +P +
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG-VPG------TEG 191
Query: 584 SVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT----------GR 633
++ E+ + + N P+ DI+S G + +I+ R
Sbjct: 192 WIAPEMLSEDCKEN---------------PTYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP 693
A + +G+ +D ++ +K E++IA ++ + P
Sbjct: 237 QANILLGACSLDCLH-----------------------PEKHEDVIA-RELIEKMIAMDP 272
Query: 694 EKRPTMRHI 702
+KRP+ +H+
Sbjct: 273 QKRPSAKHV 281
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 113 GLQSLVLYGNSFSGS-VPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNN 171
L+ L + GNSF + +P+ +L+ L LDLSQ P + L+ L+++ N
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505
Query: 172 FTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202
+P+G L SL+K+ L N ++ S P
Sbjct: 506 LKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 16/62 (25%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-------------GHNMEPHVSDFGL 554
+ +++ IA G+ +LH K +H DLKP NIL+ N+ +SDFGL
Sbjct: 118 ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 555 AR 556
+
Sbjct: 175 CK 176
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 38/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-------SRERVFSEDR 109
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH S K V+ DLK N++L + ++DFGL + I G+
Sbjct: 110 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATM 166
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 167 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 199
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 200 YEMMCGR 206
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 16/62 (25%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-------------GHNMEPHVSDFGL 554
+ +++ IA G+ +LH K +H DLKP NIL+ N+ +SDFGL
Sbjct: 136 ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 555 AR 556
+
Sbjct: 193 CK 194
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + + H NIV L + L+ +Y G + L HG+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-------EKEA 115
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
R K + I + Y H+ K VH DLK N+LL +M ++DFG +
Sbjct: 116 RAKF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 16/62 (25%)
Query: 508 VKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-------------GHNMEPHVSDFGL 554
+ +++ IA G+ +LH K +H DLKP NIL+ N+ +SDFGL
Sbjct: 136 ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 555 AR 556
+
Sbjct: 193 CK 194
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 38/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-------SRERVFSEDR 110
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH S K V+ DLK N++L + ++DFGL + I G+
Sbjct: 111 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATM 167
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 168 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 201 YEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 38/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-------SRERVFSEDR 111
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH S K V+ DLK N++L + ++DFGL + I G+
Sbjct: 112 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATM 168
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 169 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 201
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 202 YEMMCGR 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 67/190 (35%), Gaps = 49/190 (25%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
EV + + H NIV L + L+ +Y G + L M R
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKE-----KEARA 110
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG------ 562
K + I + Y H+ K VH DLK N+LL +M ++DFG +
Sbjct: 111 KF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 166
Query: 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622
GSP P P+ Q G Y PE D++S
Sbjct: 167 GSP-------PYAAPELFQ-----------------GKKYDGPEV----------DVWSL 192
Query: 623 GVILLEMITG 632
GVIL +++G
Sbjct: 193 GVILYTLVSG 202
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 91/235 (38%), Gaps = 48/235 (20%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVR-----RLGEGGSQRFKEFQTEVEAIGKIRHSNIVT 463
V+GK +V + + E G AV+ + ++ + E ++H +IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 464 LRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
L Y S ++++++ L + G V +V ++ I + L Y
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV----YSEAVASHYMRQILEALRYC 146
Query: 522 HEFSPKKYVHGDLKPSNILLG--HNMEP-HVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
H+ +H D+KP N+LL N P + DFG+A
Sbjct: 147 HD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA----------------------- 180
Query: 579 ERQQKSVSLEVTTTNSSSNLGS-YYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632
+ L + + +G+ ++ APE +K + D++ GVIL +++G
Sbjct: 181 ------IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 103/266 (38%), Gaps = 49/266 (18%)
Query: 446 FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
F + K+ H ++V + DE +L+ +++ GSL T L ++ + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN---ILW- 114
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
++++ K +A + +L E +HG++ NILL + + +L++ P
Sbjct: 115 -KLEVAKQLAWAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-----P 165
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
+ +P + QER V E + NL + D +S+G
Sbjct: 166 GISITVLPKDILQER-IPWVPPECIENPKNLNLAT-----------------DKWSFGTT 207
Query: 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIA 685
L E+ +G + S+ L + E++ L AP A + +I
Sbjct: 208 LWEICSGGDKPLSALDSQRKLQFY-----EDRHQLP-------APKAAELANLIN----- 250
Query: 686 MACVHSSPEKRPTMRHISDALDRLIV 711
C+ P+ RP+ R I L+ L
Sbjct: 251 -NCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V + V + G A + + ++ ++ + E ++H NIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
LI+D + G L +V+ + I+ I + +++ H+
Sbjct: 90 ISEEGHHYLIFDLVTGGELFE------DIVAREYYSEADASHCIQQILEAVLHCHQMG-- 141
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLA 555
VH DLKP N+LL ++ ++DFGLA
Sbjct: 142 -VVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 447 QTEVEAIGKIRHSNIVTLRAY------YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFT 500
+TE+ +RH NI+ A W+ + LI DY NGSL L T
Sbjct: 79 ETEIYQTVLMRHENILGFIAADIKGTGSWT--QLYLITDYHENGSLYDYLKS-------T 129
Query: 501 PVPWSVRVKIIKGIAKGLVYLHE--FSPK---KYVHGDLKPSNILLGHNMEPHVSDFGLA 555
+ +K+ GL +LH FS + H DLK NIL+ N ++D GLA
Sbjct: 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAY-- 467
+GK G V++ + G +AV+ + F+E TE+ +RH NI+ A
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 468 --YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE-- 523
S + LI Y GSL L T + ++I+ IA GL +LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 524 FSPK---KYVHGDLKPSNILLGHNMEPHVSDFGLA 555
F + H DLK NIL+ N + ++D GLA
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 33/146 (22%)
Query: 498 SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
++ P P + + + + +LH+ K H DLKP NIL + SD+ L
Sbjct: 130 NYLPYPIHQVRHMAFQLCQAVKFLHD---NKLTHTDLKPENILFVN------SDYEL--- 177
Query: 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSS-------SNLGS--YYQAPESL 608
+ L+ R ER KS ++ V S+ S + S +Y+APE +
Sbjct: 178 ------TYNLEKKR------DERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVI 225
Query: 609 KVVKPSQKWDIYSYGVILLEMITGRT 634
+ SQ D++S G I+ E G T
Sbjct: 226 LELGWSQPCDVWSIGCIIFEYYVGFT 251
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 40/179 (22%)
Query: 461 IVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
I L + + L+ DY G L T L +P + I + +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED-----KLPEDMARFYIGEMVLAIDS 206
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
+H+ YVH D+KP N+LL N ++DFG N G T+QS
Sbjct: 207 IHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG---TVQS----------- 249
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-----KPSQKWDIYSYGVILLEMITGRT 634
S+ V T + Y +PE L+ + K + D +S GV + EM+ G T
Sbjct: 250 -----SVAVGTPD--------YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 295
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNM--EPHVSDFGLARLANIAGGSPTLQSNRMPAE 575
L Y+HE +YVHGD+K +N+LLG+ + +++D+GL+ G Q N
Sbjct: 164 LEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQEN----- 215
Query: 576 KPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
R+ + ++E T+ ++ K V S++ D+ G +L + G+
Sbjct: 216 ---PRKGHNGTIEFTSLDAH-------------KGVALSRRSDVEILGYCMLRWLCGK 257
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 40/179 (22%)
Query: 461 IVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
I L + + L+ DY G L T L +P + I + +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED-----KLPEDMARFYIGEMVLAIDS 190
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQER 580
+H+ YVH D+KP N+LL N ++DFG N G T+QS
Sbjct: 191 IHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG---TVQS----------- 233
Query: 581 QQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-----KPSQKWDIYSYGVILLEMITGRT 634
S+ V T + Y +PE L+ + K + D +S GV + EM+ G T
Sbjct: 234 -----SVAVGTPD--------YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 279
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE----FQTEVEAIGKIRHSNIVTLR 465
+G+ G V K+ ++ G +RR + + F E F+ E+E + + H NI+ L
Sbjct: 16 TIGRGSWGEV-KIAVQKG--TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ + L+ + G L + K S +I+K + + Y H+ +
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRE------SDAARIMKDVLSAVAYCHKLN 126
Query: 526 PKKYVHGDLKPSNILL---GHNMEPHVSDFGLA 555
H DLKP N L + + DFGLA
Sbjct: 127 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 38/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-------SRERVFSEDR 252
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH S K V+ DLK N++L + ++DFGL + I G+
Sbjct: 253 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATM 309
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 310 KTFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 342
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 343 YEMMCGR 349
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE----FQTEVEAIGKIRHSNIVTLR 465
+G+ G V K+ ++ G +RR + + F E F+ E+E + + H NI+ L
Sbjct: 33 TIGRGSWGEV-KIAVQKG--TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ + L+ + G L + K S +I+K + + Y H+ +
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRE------SDAARIMKDVLSAVAYCHKLN 143
Query: 526 PKKYVHGDLKPSNILL---GHNMEPHVSDFGLA 555
H DLKP N L + + DFGLA
Sbjct: 144 ---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 38/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-------SRERVFSEDR 249
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH S K V+ DLK N++L + ++DFGL + I G+
Sbjct: 250 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATM 306
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 307 KTFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 339
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 340 YEMMCGR 346
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 502 VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
+P + KI I K L +LH S +H D+KPSN+L+ + + DFG++
Sbjct: 150 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 84/231 (36%), Gaps = 44/231 (19%)
Query: 410 VLGKSGIG-IVYKVVLEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIR-HSNIVTL 464
VLGK G ++ V E G AV+ L + + + + TE + R H + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 465 RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG-IAKGLVYLHE 523
+ + D + +++ G L + R + I L++LH+
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE-------ARARFYAAEIISALMFLHD 142
Query: 524 FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583
K ++ DLK N+LL H ++DFG+ + I G T P
Sbjct: 143 ---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPD--------- 189
Query: 584 SVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634
Y APE L+ + D ++ GV+L EM+ G
Sbjct: 190 ------------------YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAY-- 467
+GK G V++ + G +AV+ + F+E TE+ +RH NI+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 468 --YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE-- 523
S + LI Y GSL L T + ++I+ IA GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 524 FSPK---KYVHGDLKPSNILLGHNMEPHVSDFGLA 555
F + H DLK NIL+ N + ++D GLA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAY-- 467
+GK G V++ + G +AV+ + F+E TE+ +RH NI+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 468 --YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE-- 523
S + LI Y GSL L T + ++I+ IA GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 524 FSPK---KYVHGDLKPSNILLGHNMEPHVSDFGLA 555
F + H DLK NIL+ N + ++D GLA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 502 VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
+P + KI I K L +LH S +H D+KPSN+L+ + + DFG++
Sbjct: 106 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 106
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 162
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 163 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 196 YEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 111
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 112 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 167
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 168 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 201 YEMMCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 106
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 162
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 163 KTFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 196 YEMMCGR 202
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 49/266 (18%)
Query: 446 FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWS 505
F + K+ H ++V DE +L+ +++ GSL T L ++ + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN---ILW- 114
Query: 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565
++++ K +A + +L E +HG++ NILL + + +L++ P
Sbjct: 115 -KLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-----P 165
Query: 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625
+ +P + QER V E + NL + D +S+G
Sbjct: 166 GISITVLPKDILQER-IPWVPPECIENPKNLNLAT-----------------DKWSFGTT 207
Query: 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIA 685
L E+ +G + S+ L + E++ L AP A + +I
Sbjct: 208 LWEICSGGDKPLSALDSQRKLQFY-----EDRHQLP-------APKAAELANLIN----- 250
Query: 686 MACVHSSPEKRPTMRHISDALDRLIV 711
C+ P+ RP+ R I L+ L
Sbjct: 251 -NCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 106
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 162
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 163 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 196 YEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 106
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 162
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 163 KXFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 196 YEMMCGR 202
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 114 LQSLVLYGNSFSGSVPNEIGK-LKYLQILDLSQNFFNGSLPVSIVQCK-RLKALDLSQNN 171
L L L N F +P E+ K L L+I+DL N N +LP S+ + LK+L+L +N
Sbjct: 548 LHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNL 605
Query: 172 FTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203
T FG +L +L++ FN F+ + S
Sbjct: 606 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 637
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 106
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 162
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 163 KTFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 196 YEMMCGR 202
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 55 SWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGL 114
S +G+ + +V + + + +L G P+A + ++ + L NK L L
Sbjct: 45 SSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQL 104
Query: 115 QSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFN 149
++L LY N S +P L L L+L+ N FN
Sbjct: 105 KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 114 LQSLVLYGNSFSGSVPNEIGK-LKYLQILDLSQNFFNGSLPVSIVQCK-RLKALDLSQNN 171
L L L N F +P E+ K L L+I+DL N N +LP S+ + LK+L+L +N
Sbjct: 543 LHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNL 600
Query: 172 FTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203
T FG +L +L++ FN F+ + S
Sbjct: 601 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 632
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 448 TEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR 507
TE + RH + L+ + + D + +Y G L L S V R
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-------SRERVFTEER 109
Query: 508 VKIIKG-IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566
+ I L YLH + V+ D+K N++L + ++DFGL + I+ G+
Sbjct: 110 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATM 165
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
P Y APE L+ + D + GV++
Sbjct: 166 KTFCGTPE---------------------------YLAPEVLEDNDYGRAVDWWGLGVVM 198
Query: 627 LEMITGR 633
EM+ GR
Sbjct: 199 YEMMCGR 205
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 502 VPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
+P + KI I K L +LH S +H D+KPSN+L+ + DFG++
Sbjct: 133 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 114 LQSLVLYGNSFSGSVPNEIGK-LKYLQILDLSQNFFNGSLPVSIVQCK-RLKALDLSQNN 171
L L L N F +P E+ K L L+I+DL N N +LP S+ + LK+L+L +N
Sbjct: 538 LHILNLESNGF-DEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNL 595
Query: 172 FTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203
T FG +L +L++ FN F+ + S
Sbjct: 596 ITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 41/128 (32%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLARLANIAGG---SPT 566
I K + YLH + VH DLKPSNIL G+ + DFG A+ G +P
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626
+N + APE L+ DI+S GV+L
Sbjct: 182 YTAN-------------------------------FVAPEVLERQGYDAACDIWSLGVLL 210
Query: 627 LEMITGRT 634
+TG T
Sbjct: 211 YTXLTGYT 218
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNM--EPHVSDFGLA 555
L Y+HE +YVHGD+K SN+LL + + ++ D+GLA
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
KII+ + +GL YLH + + +H D+KP NILL N
Sbjct: 150 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVN 183
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNM--EPHVSDFGLA 555
L Y+HE +YVHGD+K SN+LL + + ++ D+GLA
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNM--EPHVSDFGLA 555
L Y+HE +YVHGD+K SN+LL + + ++ D+GLA
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 87 LTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEI-GKLKYLQILDLSQ 145
L ++R++ L NK L+ E L L+L GN S+PN + KL L+ L L +
Sbjct: 62 LPNVRYLALGGNKLHDISALK--ELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 146 NFFNGSLPVSIV-QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202
N SLP + + L L+L+ N LP G L +L +L+LS+N+ S+P
Sbjct: 119 NQLQ-SLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQ-SLP 173
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544
KII+ + +GL YLH + + +H D+KP NILL N
Sbjct: 134 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVN 167
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 120 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 160
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 161 -------------MEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541
II+ + +GL YLH S K +H D+KP NIL+
Sbjct: 145 IIRQVLQGLDYLH--SKCKIIHTDIKPENILM 174
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 34/159 (21%)
Query: 498 SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+F P P + + L +LHE + H DLKP NIL
Sbjct: 116 NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILF---------------- 156
Query: 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN---------LGSYYQAPESL 608
+ TL + E E+ K+ S+ V S++ +Y+ PE +
Sbjct: 157 --VNSEFETLYNEHKSCE---EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVI 211
Query: 609 KVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ +Q D++S G IL E G T + Q + LV
Sbjct: 212 LELGWAQPCDVWSIGCILFEYYRGFT-LFQTHENREHLV 249
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 27/128 (21%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
I K L YL + S H DLKP NILL +P+ L + + G
Sbjct: 146 ILKALNYLRKMS---LTHTDLKPENILLD---DPYFEK-SLITVRRVTDG---------- 188
Query: 574 AEKPQERQQKSVSLEVTTTNSSSNLGSY---------YQAPESLKVVKPSQKWDIYSYGV 624
+K Q + KS +++ ++ Y Y+APE + + D++S+G
Sbjct: 189 -KKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGC 247
Query: 625 ILLEMITG 632
+L E+ TG
Sbjct: 248 VLAELYTG 255
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 411 LGKSGIGIV---YKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V KV+ + + + ++ ++ + E ++H NIV L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
LI+D + G L +V+ + I+ I + +++ H+
Sbjct: 79 ISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHCHQMG-- 130
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLA 555
VH +LKP N+LL ++ ++DFGLA
Sbjct: 131 -VVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 54/237 (22%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY--- 467
+GK G V++ G +AV+ + +R + E+ +RH NI+ A
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107
Query: 468 ---YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-- 522
W+ + L+ DY +GSL L+ V +K+ A GL +LH
Sbjct: 108 DNGTWT--QLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHME 158
Query: 523 ----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ P H DLK NIL+ N ++D GLA + A + + N K
Sbjct: 159 IVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR- 216
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPE------SLKVVKPSQKWDIYSYGVILLEM 629
Y APE ++K + ++ DIY+ G++ E+
Sbjct: 217 -----------------------YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 34/159 (21%)
Query: 498 SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+F P P + + L +LHE + H DLKP NIL
Sbjct: 125 NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILF---------------- 165
Query: 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN---------LGSYYQAPESL 608
+ TL + E E+ K+ S+ V S++ +Y+ PE +
Sbjct: 166 --VNSEFETLYNEHKSCE---EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVI 220
Query: 609 KVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647
+ +Q D++S G IL E G T + Q + LV
Sbjct: 221 LELGWAQPCDVWSIGCILFEYYRGFT-LFQTHENREHLV 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 123 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 163
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 164 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 122 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 162
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 163 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 54/237 (22%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY--- 467
+GK G V++ G +AV+ + +R + E+ +RH NI+ A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 94
Query: 468 ---YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-- 522
W+ + L+ DY +GSL L+ V +K+ A GL +LH
Sbjct: 95 DNGTWT--QLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHME 145
Query: 523 ----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ P H DLK NIL+ N ++D GLA + A + + N K
Sbjct: 146 IVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR- 203
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPE------SLKVVKPSQKWDIYSYGVILLEM 629
Y APE ++K + ++ DIY+ G++ E+
Sbjct: 204 -----------------------YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 54/146 (36%), Gaps = 33/146 (22%)
Query: 498 SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557
+F P P + + L +LHE + H DLKP NIL
Sbjct: 148 NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILF---------------- 188
Query: 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN---------LGSYYQAPESL 608
+ TL + E E+ K+ S+ V S++ +Y+ PE +
Sbjct: 189 --VNSEFETLYNEHKSCE---EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVI 243
Query: 609 KVVKPSQKWDIYSYGVILLEMITGRT 634
+ +Q D++S G IL E G T
Sbjct: 244 LELGWAQPCDVWSIGCILFEYYRGFT 269
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 125 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 165
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 166 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 148 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 188
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 189 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 120 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 160
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 161 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 120 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 160
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 161 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 54/237 (22%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY--- 467
+GK G V++ G +AV+ + +R + E+ +RH NI+ A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 468 ---YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-- 522
W+ + L+ DY +GSL L+ V +K+ A GL +LH
Sbjct: 70 DNGTWT--QLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHME 120
Query: 523 ----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ P H DLK NIL+ N ++D GLA + A + + N K
Sbjct: 121 IVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR- 178
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPE------SLKVVKPSQKWDIYSYGVILLEM 629
Y APE ++K + ++ DIY+ G++ E+
Sbjct: 179 -----------------------YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 117 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 157
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 158 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 54/237 (22%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY--- 467
+GK G V++ G +AV+ + +R + E+ +RH NI+ A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 468 ---YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-- 522
W+ + L+ DY +GSL L+ V +K+ A GL +LH
Sbjct: 69 DNGTWT--QLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHME 119
Query: 523 ----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ P H DLK NIL+ N ++D GLA + A + + N K
Sbjct: 120 IVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR- 177
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPE------SLKVVKPSQKWDIYSYGVILLEM 629
Y APE ++K + ++ DIY+ G++ E+
Sbjct: 178 -----------------------YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 447 QTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTP---VP 503
+ E++ + ++RH N++ L ++ +EK +Y + + G M+ P P
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYN-EEKQKMY-----MVMEYCVCGMQEMLDSVPEKRFP 107
Query: 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR-LANIAG 562
+ GL YLH + VH D+KP N+LL +S G+A L A
Sbjct: 108 VCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164
Query: 563 GSPTLQSNRMPAEKPQE 579
S PA +P E
Sbjct: 165 DDTCRTSQGSPAFQPPE 181
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 112 QGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNN 171
+ + L L GN F+ VP E+ K+L ++DLS N + S +L L LS N
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 172 FTGPLPNGFGSGLVSLEKLNLSFNKFN 198
P F GL SL L+L N +
Sbjct: 90 LRCIPPRTF-DGLKSLRLLSLHGNDIS 115
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 89 DLRHVNLR---NNKFFGSLPLELLEAQGLQSLVLYGNSFSGS-VPNEIGKLKYLQILDLS 144
D+ H + R N F G LE+L+ + GNSF + +P+ +L+ L LDLS
Sbjct: 132 DISHTHTRVAFNGIFNGLSSLEVLK--------MAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 145 QNFFNGSLPVSIVQCKRLKALDLSQNNF 172
Q P + L+ L++S NNF
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 13/109 (11%)
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATAL--HGKPGMVSFTPVPWSV 506
EV + H NIV L + L+ +Y G + L HG+
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK-------EKEA 115
Query: 507 RVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555
R K + I + Y H+ K VH DLK N+LL + ++DFG +
Sbjct: 116 RAKF-RQIVSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 54/237 (22%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY--- 467
+GK G V++ G +AV+ + +R + E+ +RH NI+ A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 468 ---YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-- 522
W+ + L+ DY +GSL L+ V +K+ A GL +LH
Sbjct: 72 DNGTWT--QLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHME 122
Query: 523 ----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ P H DLK NIL+ N ++D GLA + A + + N K
Sbjct: 123 IVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR- 180
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPE------SLKVVKPSQKWDIYSYGVILLEM 629
Y APE ++K + ++ DIY+ G++ E+
Sbjct: 181 -----------------------YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469
LG+ GIV++ V T + + G+ + + E+ + RH NI+ L +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFE 71
Query: 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529
S++E ++I+++I + ++ ++ + V + + + L +LH +
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSAFELNEREI-----VSYVHQVCEALQFLHSHNIG-- 124
Query: 530 VHGDLKPSNILLGHNMEPHVS--DFGLAR 556
H D++P NI+ + +FG AR
Sbjct: 125 -HFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 54/237 (22%)
Query: 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY--- 467
+GK G V++ G +AV+ + +R + E+ +RH NI+ A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 74
Query: 468 ---YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-- 522
W+ + L+ DY +GSL L+ V +K+ A GL +LH
Sbjct: 75 DNGTWT--QLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHME 125
Query: 523 ----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578
+ P H DLK NIL+ N ++D GLA + A + + N K
Sbjct: 126 IVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR- 183
Query: 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPE------SLKVVKPSQKWDIYSYGVILLEM 629
Y APE ++K + ++ DIY+ G++ E+
Sbjct: 184 -----------------------YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 113 GLQSLVLYGNSFSGS-VPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNN 171
L+ L + GNSF + +P+ +L+ L LDLSQ P + L+ L++S NN
Sbjct: 470 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529
Query: 172 F 172
F
Sbjct: 530 F 530
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 34/119 (28%)
Query: 514 IAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMP 573
++ L YL K++VH D+ N+L+ N + DFGL+R
Sbjct: 500 LSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---------------- 540
Query: 574 AEKPQERQQKSVSLEVTTTNSSS--NLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630
+E +T +S L + APES+ + + D++ +GV + E++
Sbjct: 541 -------------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 17/92 (18%)
Query: 135 LKYLQILDLSQNFF----------NGS----LPVSIVQCKRLKALDLSQNNFTGPLPNGF 180
L LQI ++S N F NG+ LP I L+ LDLS N T LP
Sbjct: 231 LSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTS-LPAEL 289
Query: 181 GSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQ 212
GS K F+ ++P GNL +LQ
Sbjct: 290 GSCFQL--KYFYFFDNMVTTLPWEFGNLCNLQ 319
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 113 GLQSLVLYGNSFSGS-VPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNN 171
L+ L + GNSF + +P+ +L+ L LDLSQ P + L+ L++S NN
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 505
Query: 172 F 172
F
Sbjct: 506 F 506
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 117 LVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPL 176
LV+ N+F G I KL Y Q L L FNG L+ L L+Q N G +
Sbjct: 68 LVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNG--------LANLEVLTLTQCNLDGAV 119
Query: 177 PNG-FGSGLVSLEKLNLSFNKFNGSIPS 203
+G F L SLE L L N P+
Sbjct: 120 LSGNFFKPLTSLEMLVLRDNNIKKIQPA 147
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 410 VLGKSGIGIVYKVVLEDGH----TLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVTL 464
+LG+ G VY+ V + +AV+ + + KE F +E + + H +IV L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 465 RAYYWSVDEK--LLIYDYIPNGSLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
++E+ +I + P G L L K + T V +S++ I K + YL
Sbjct: 75 IGI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------ICKAMAYL 125
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
+ VH D+ NIL+ + DFGL+R
Sbjct: 126 ESINC---VHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 17/182 (9%)
Query: 87 LTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQN 146
L +L +N NN+ PL+ L L +++ N + P + L L L L N
Sbjct: 62 LNNLTQINFSNNQLTDITPLKNLTK--LVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 147 FFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTG 206
P+ L L+LS N + SGL SL++LN S N+ P
Sbjct: 118 QITDIDPLK--NLTNLNRLELSSNTISDI---SALSGLTSLQQLNFSSNQVTDLKP--LA 170
Query: 207 NLSSLQGTVDFSHNLFSG-SIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFI 265
NL++L+ +D S N S S+ A L NL + T N +S P G L N +
Sbjct: 171 NLTTLER-LDISSNKVSDISVLAKLTNLESLIA---TNNQISDITPL-GILTNLDELSLN 225
Query: 266 GN 267
GN
Sbjct: 226 GN 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 410 VLGKSGIGIVYKVVLEDGH----TLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVTL 464
+LG+ G VY+ V + +AV+ + + KE F +E + + H +IV L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 465 RAYYWSVDEK--LLIYDYIPNGSLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
++E+ +I + P G L L K + T V +S++ I K + YL
Sbjct: 79 IGI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------ICKAMAYL 129
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
+ VH D+ NIL+ + DFGL+R
Sbjct: 130 ESINC---VHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 82 SALGSLTDLRHVNLRNNKFFGSLPLELLEA-QGLQSLVLYGNSFSGSVPNEI-GKLKYLQ 139
SAL LT+L ++ L N+ SLP + + L+ LVL N S+P+ + KL L
Sbjct: 79 SALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLT 136
Query: 140 ILDLSQNFFNGSLPVSIV-QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198
L L N SLP + + L LDL N LP G L L++L+L+ N+
Sbjct: 137 YLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLK 194
Query: 199 GSIP 202
S+P
Sbjct: 195 -SVP 197
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 15/162 (9%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + K+ + E + + +V L
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y+P G + + L + G S P +I+ YLH
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 147
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++ DLKP N+L+ V+DFG A+ + G + TL
Sbjct: 148 ---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWTL 184
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 410 VLGKSGIGIVYKVVLEDGH----TLAVRRLGEGGSQRFKE-FQTEVEAIGKIRHSNIVTL 464
+LG+ G VY+ V + +AV+ + + KE F +E + + H +IV L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 465 RAYYWSVDEK--LLIYDYIPNGSLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL 521
++E+ +I + P G L L K + T V +S++ I K + YL
Sbjct: 91 IGI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------ICKAMAYL 141
Query: 522 HEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
+ VH D+ NIL+ + DFGL+R
Sbjct: 142 ESINC---VHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 77 LGFLPS-ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKL 135
L F+ S A + +LR+++L +N + Q L+ L+LY N N +
Sbjct: 76 LNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDM 135
Query: 136 KYLQILDLSQNFFNGSLPVSIV----QCKRLKALDLSQN 170
LQ L LSQN PV ++ + +L LDLS N
Sbjct: 136 AQLQKLYLSQNQI-SRFPVELIKDGNKLPKLMLLDLSSN 173
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 138 LQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197
+++LDL N S+P +V+ + L+ L+++ N +P+G L SL+K+ L N +
Sbjct: 423 IKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPW 480
Query: 198 NGSIP 202
+ S P
Sbjct: 481 DCSCP 485
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 15/162 (9%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + K+ + E + + +V L
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y+P G + + L + G S P +I+ YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 162
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
++ DLKP N+L+ V+DFG A+ + G + TL
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWTL 199
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567
YLH ++ DLKP N+L+ V+DFG A+ + G + TL
Sbjct: 177 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGATWTL 219
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 130 NEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEK 189
+E +L+ L+L++N + P + L+ L L N +P G +GL +L K
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTK 108
Query: 190 LNLSFNKFN---GSIPSNTGNLSSLQ----GTVDFSHNLFSG 224
L++S NK + + NL SL+ V SH FSG
Sbjct: 109 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG 150
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + KE + E + + +V L
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y P G + + L + G S P +I+ YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 161
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ DLKP N+++ V+DFGLA+
Sbjct: 162 ---LIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 81 PSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFS 125
P A LR ++L NN+ P + L SLVLYGN +
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 81 PSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFS 125
P A LR ++L NN+ P + L SLVLYGN +
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + K+ + E + + +V L
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y+P G + + L + G S P +I+ YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 161
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ DLKP N+L+ V+DFG A+
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + K+ + E + + +V L
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y+P G + + L + G S P +I+ YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 162
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ DLKP N+L+ V+DFG A+
Sbjct: 163 ---LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + K+ + E + + +V L
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y+P G + + L + G S P +I+ YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 161
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ DLKP N+L+ V+DFG A+
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + K+ + E + + +V L
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y+P G + + L + G S P +I+ YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 161
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ DLKP N+L+ V+DFG A+
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 583 KSVSLEVTTTNSSSNLGS---------YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
K ++++ SS LG +Y++PE L + D++S G IL+EM TG
Sbjct: 196 KRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADK 674
G++E+D +N + + P A +LD AP A K
Sbjct: 256 PLF--SGANEVDQMNKIVEVL--GIPPAHILDQ--APKARK 290
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 10/205 (4%)
Query: 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSF 124
RV + + L G LPS + + L+ + L N F + L+ L + GN
Sbjct: 278 RVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMR 336
Query: 125 SGSVPNE-IGKLKYLQILDLSQNFFNGS--LPVSIVQCKRLKALDLSQNNFTGPLPNGFG 181
+ + KL+ LQ LDLS + S + + + L+ L+LS N G F
Sbjct: 337 KLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFK 396
Query: 182 SGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDL 241
LE L+++F + P + L ++ SH L S L L DL
Sbjct: 397 E-CPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQ-----DL 450
Query: 242 TYNNLSGPIPQNGALMNRGPTAFIG 266
+ NL G Q+G++ +G
Sbjct: 451 RHLNLQGNSFQDGSISKTNLLQMVG 475
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 168
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 169
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK 190
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 179 GFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHN-LFSGSIPASLGNLPEKV 237
G SGL SLE L K G L +L+ ++ +HN + S +PA NL V
Sbjct: 93 GSFSGLTSLENLVAVETKLASLESFPIGQLITLKK-LNVAHNFIHSCKLPAYFSNLTNLV 151
Query: 238 YIDLTYNNLSGPIPQNGALMNRGP 261
++DL+YN + + + P
Sbjct: 152 HVDLSYNYIQTITVNDLQFLRENP 175
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 463 TLRAYYWSVDEKLL--IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
++ +Y D++ L + +Y+P G L + P W+ A+ ++
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFY-----TAEVVLA 185
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562
L ++H D+KP N+LL + ++DFG N G
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 168
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 168
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK 189
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 508 VKIIKGIAKGLVYLHEF-SPKKYVHGDLKPSNILLG---HNMEPHVSDFGLAR 556
+K + +A ++ EF K ++H D+KP N L+G + ++ DFGLA+
Sbjct: 102 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 15/151 (9%)
Query: 411 LGKSGIGIVYKVVLE---DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY 467
LGK +V + V + + + + ++ ++ + E ++H NIV L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527
L++D + G L +V+ + I I + + ++H+
Sbjct: 99 ISEEGFHYLVFDLVTGGELFE------DIVAREYYSEADASHCIHQILESVNHIHQHD-- 150
Query: 528 KYVHGDLKPSNILLGHNME---PHVSDFGLA 555
VH DLKP N+LL + ++DFGLA
Sbjct: 151 -IVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQ---TEVEAIGKIRHSNIVTLR 465
LG G V V +E G+ A++ L + + KE + E + + +V L
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525
+ ++ +Y P G + + L + G S P +I+ YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD 161
Query: 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
++ DLKP N+++ V+DFGLA+
Sbjct: 162 ---LIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 169
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK 190
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 463 TLRAYYWSVDEKLL--IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
++ +Y D++ L + +Y+P G L + P W+ A+ ++
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFY-----TAEVVLA 185
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562
L ++H D+KP N+LL + ++DFG N G
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 179 GFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHN-LFSGSIPASLGNLPEKV 237
G SGL SLE L K G L +L+ ++ +HN + S +PA NL V
Sbjct: 98 GSFSGLTSLENLVAVETKLASLESFPIGQLITLKK-LNVAHNFIHSCKLPAYFSNLTNLV 156
Query: 238 YIDLTYNNLSGPIPQNGALMNRGP 261
++DL+YN + + + P
Sbjct: 157 HVDLSYNYIQTITVNDLQFLRENP 180
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 463 TLRAYYWSVDEKLL--IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520
++ +Y D++ L + +Y+P G L + P W+ A+ ++
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFY-----TAEVVLA 180
Query: 521 LHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562
L ++H D+KP N+LL + ++DFG N G
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 119 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 169
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK 190
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 111 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 161
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 162 PENLLIDQQGYIQVTDFGFAK 182
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 139 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 189
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562
L+ L + VH D+KP+NI LG + DFGL AG
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 529 YVHGDLKPSNILLGHNMEPHVSDFG 553
YVH D+KP NILL ++DFG
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 583 KSVSLEVTTTNSSSNLGS---------YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
K ++++ SS LG +Y++PE L + D++S G IL+EM TG
Sbjct: 196 KRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADK 674
G++E+D +N + + P A +LD AP A K
Sbjct: 256 PLF--SGANEVDQMNKIVEVL--GIPPAHILDQ--APKARK 290
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 583 KSVSLEVTTTNSSSNLGS---------YYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633
K ++++ SS LG +Y++PE L + D++S G IL+EM TG
Sbjct: 177 KRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 236
Query: 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADK 674
G++E+D +N + + P A +LD AP A K
Sbjct: 237 PLF--SGANEVDQMNKIVEVL--GIPPAHILDQ--APKARK 271
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 83 ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142
L SLT+L ++L NN+ PL L L L L N S P + L L L+
Sbjct: 233 TLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQISNISP--LAGLTALTNLE 288
Query: 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197
L++N P+S K L L L NN + P S L L++L S NK
Sbjct: 289 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFSNNKV 338
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLAR 556
Y+H K ++H D+KP N L+G + ++ DFGLA+
Sbjct: 120 YIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 83 ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142
L SLT+L ++L NN+ PL L L L L N S P + L L L+
Sbjct: 234 TLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQISNISP--LAGLTALTNLE 289
Query: 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197
L++N P+S K L L L NN + P S L L++L S NK
Sbjct: 290 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFSNNKV 339
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEP---HVSDFGLAR 556
Y+H K ++H D+KP N L+G + ++ DFGLA+
Sbjct: 120 YIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLAR 556
Y+H K ++H D+KP N L+G + ++ DFGLA+
Sbjct: 118 YIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 17/170 (10%)
Query: 391 PLDTQVAFDLD--ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQT 448
P+D + D D EL+K +G G+ + + + L + E G + + +
Sbjct: 9 PMDLPIMHDSDRYELVKD----IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKR 64
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E+ +RH NIV + + ++ +Y G L + G S +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARF---- 119
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH--VSDFGLAR 556
+ + G+ Y H + H DLK N LL + P ++DFG ++
Sbjct: 120 -FFQQLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 118 MVMEYVPGGEMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 168
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 169 PENLLIDQQGYIKVADFGFAK 189
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
YLH ++ DLKP N+L+ V+DFG A+
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
YLH ++ DLKP N+L+ V+DFG A+
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 520 YLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556
YLH ++ DLKP N+L+ V+DFG A+
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 17/170 (10%)
Query: 391 PLDTQVAFDLD--ELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQT 448
P+D + D D EL+K +G G+ + + + L + E G + +
Sbjct: 9 PMDLPIMHDSDRYELVKD----IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKR 64
Query: 449 EVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
E+ +RH NIV + + ++ +Y G L + G S +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARF---- 119
Query: 509 KIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH--VSDFGLAR 556
+ + G+ Y H + H DLK N LL + P + DFG ++
Sbjct: 120 -FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|2Z04|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
Carboxylase Atpase Subunit From Aquifex Aeolicus
pdb|2Z04|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
Carboxylase Atpase Subunit From Aquifex Aeolicus
Length = 365
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Query: 392 LDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS--QRFKEFQTE 449
+D +F L ++KA LG G G LED + + E + F +F+ E
Sbjct: 119 IDALKSFKLPVVIKAEK--LGYDGKGQYRIKKLEDANQVVKNHDKEESFIIEEFVKFEAE 176
Query: 450 VEAIG-KIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRV 508
+ IG + R + +E +LIY+Y+P L A + + V
Sbjct: 177 ISCIGVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLXELLDIVGVFTV 236
Query: 509 KIIKGIAKGLVYLHEFSPK 527
+ + G V ++EF+P+
Sbjct: 237 EFFL-LKDGRVLINEFAPR 254
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 13/168 (7%)
Query: 391 PLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEV 450
PLD + D D G G+ + + L +AV+ + E G+ + Q E+
Sbjct: 10 PLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYI-ERGAAIDENVQREI 67
Query: 451 EAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKI 510
+RH NIV + + +I +Y G L + G S +
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEARF-----F 121
Query: 511 IKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH--VSDFGLAR 556
+ + G+ Y H + H DLK N LL + P + DFG ++
Sbjct: 122 FQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 92 HVNLRNNKFFGSLPLELLEA-QGLQSLVLYGNSFSGSVPNEI-GKLKYLQILDLSQNFFN 149
+ L +NK SLP + + L L L N S+P+ + KL L IL L +N
Sbjct: 32 RLELESNKL-QSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQ 89
Query: 150 GSLPVSIV-QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202
SLP + + +LK L L N +P+G L SL+K+ L N ++ S P
Sbjct: 90 -SLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 141
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 118 MVMEYMPGGDMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 168
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 169 PENLLIDQQGYIKVADFGFAK 189
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535
++ +Y+P G + + L + G S P +I+ YLH ++ DLK
Sbjct: 118 MVMEYMPGGDMFSHLR-RIGRFS-EPHARFYAAQIVLTFE----YLHSLD---LIYRDLK 168
Query: 536 PSNILLGHNMEPHVSDFGLAR 556
P N+L+ V+DFG A+
Sbjct: 169 PENLLIDQQGYIKVADFGFAK 189
>pdb|2CUN|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
pdb|2CUN|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
Length = 410
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV--YLHEFSPKKYVHGDL 534
+ DY+ N + ATA +P +V F + + +++ + L+ Y + SPK YV G
Sbjct: 140 VIDYVVNDAFATAHRSQPSLVGFARIKPMIMGFLMEKEIEALMRAYYSKDSPKIYVLGGA 199
Query: 535 KPSNIL 540
K + L
Sbjct: 200 KVEDSL 205
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 83 ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142
L SLT+L ++L NN+ PL L L L L N S P + L L L+
Sbjct: 237 TLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQISNISP--LAGLTALTNLE 292
Query: 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197
L++N P+S K L L L NN + P S L L++L + NK
Sbjct: 293 LNENQLEDISPIS--NLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFANNKV 342
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,806,677
Number of Sequences: 62578
Number of extensions: 950712
Number of successful extensions: 4303
Number of sequences better than 100.0: 991
Number of HSP's better than 100.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 2283
Number of HSP's gapped (non-prelim): 1762
length of query: 714
length of database: 14,973,337
effective HSP length: 106
effective length of query: 608
effective length of database: 8,340,069
effective search space: 5070761952
effective search space used: 5070761952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)