Query 005102
Match_columns 714
No_of_seqs 672 out of 5047
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 18:05:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005102.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005102hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.3E-68 7.2E-73 643.8 41.9 548 64-712 380-954 (968)
2 KOG1187 Serine/threonine prote 100.0 4.1E-54 8.9E-59 454.4 27.5 285 394-711 61-354 (361)
3 KOG0581 Mitogen-activated prot 100.0 8.4E-49 1.8E-53 389.7 22.7 256 398-704 76-334 (364)
4 KOG0192 Tyrosine kinase specif 100.0 9.7E-48 2.1E-52 402.6 26.4 262 397-711 37-305 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 2.5E-47 5.3E-52 397.0 19.8 265 395-713 200-465 (468)
6 KOG0575 Polo-like serine/threo 100.0 2.4E-46 5.3E-51 392.9 22.1 242 408-704 23-268 (592)
7 KOG0595 Serine/threonine-prote 100.0 2.8E-46 6E-51 374.5 18.7 191 410-638 17-216 (429)
8 KOG1026 Nerve growth factor re 100.0 1.9E-45 4.1E-50 400.8 18.9 259 409-713 492-766 (774)
9 KOG0615 Serine/threonine prote 100.0 7.4E-46 1.6E-50 370.6 12.9 246 408-704 177-436 (475)
10 KOG0591 NIMA (never in mitosis 100.0 1.3E-45 2.8E-50 351.1 12.1 252 410-707 26-283 (375)
11 KOG0598 Ribosomal protein S6 k 100.0 1.1E-44 2.3E-49 360.5 17.1 235 409-697 31-269 (357)
12 KOG0593 Predicted protein kina 100.0 2.3E-44 5E-49 345.9 14.9 256 410-704 9-283 (396)
13 KOG0600 Cdc2-related protein k 100.0 6.7E-43 1.5E-47 357.8 21.0 257 410-704 124-399 (560)
14 KOG0592 3-phosphoinositide-dep 100.0 3.4E-43 7.3E-48 362.8 18.4 255 408-704 78-337 (604)
15 KOG0198 MEKK and related serin 100.0 1.1E-42 2.5E-47 353.1 18.2 250 408-705 22-276 (313)
16 PHA02988 hypothetical protein; 100.0 8.9E-42 1.9E-46 354.3 24.2 261 394-710 11-280 (283)
17 KOG0661 MAPK related serine/th 100.0 4.2E-43 9.2E-48 356.7 13.2 256 409-704 16-290 (538)
18 KOG0193 Serine/threonine prote 100.0 1.4E-42 2.9E-47 362.5 16.3 264 394-711 385-655 (678)
19 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-43 2.9E-48 378.0 8.8 255 408-712 634-894 (996)
20 KOG4721 Serine/threonine prote 100.0 1E-42 2.2E-47 358.4 13.6 248 396-707 119-366 (904)
21 KOG0659 Cdk activating kinase 100.0 8.6E-42 1.9E-46 323.1 18.4 258 409-705 8-281 (318)
22 KOG0578 p21-activated serine/t 100.0 1.6E-42 3.4E-47 361.4 14.7 242 410-704 280-522 (550)
23 KOG0582 Ste20-like serine/thre 100.0 1.8E-41 3.9E-46 342.3 21.0 257 409-704 32-292 (516)
24 KOG0597 Serine-threonine prote 100.0 3.3E-42 7.2E-47 355.1 16.0 240 409-704 8-250 (808)
25 KOG1095 Protein tyrosine kinas 100.0 9.7E-42 2.1E-46 385.1 20.9 259 408-712 697-964 (1025)
26 KOG0616 cAMP-dependent protein 100.0 2.8E-41 6E-46 324.3 17.5 239 398-696 41-283 (355)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.9E-41 1.3E-45 357.9 22.1 259 408-711 12-336 (338)
28 KOG0583 Serine/threonine prote 100.0 1.2E-40 2.6E-45 352.6 22.5 241 409-703 23-273 (370)
29 KOG0605 NDR and related serine 100.0 8E-41 1.7E-45 345.8 19.7 263 410-698 148-435 (550)
30 cd05096 PTKc_DDR1 Catalytic do 100.0 8.6E-40 1.9E-44 343.5 25.2 261 409-708 11-304 (304)
31 KOG0201 Serine/threonine prote 100.0 1.7E-41 3.6E-46 342.6 10.6 242 409-704 19-262 (467)
32 KOG0663 Protein kinase PITSLRE 100.0 3.1E-40 6.6E-45 321.7 18.1 254 409-704 82-360 (419)
33 cd05571 STKc_PKB Catalytic dom 100.0 3.2E-40 6.9E-45 349.6 19.7 240 410-704 2-250 (323)
34 cd05585 STKc_YPK1_like Catalyt 100.0 3.5E-40 7.6E-45 347.6 19.4 237 411-702 1-241 (312)
35 KOG0194 Protein tyrosine kinas 100.0 2E-40 4.4E-45 351.2 16.6 252 409-712 163-423 (474)
36 KOG4278 Protein tyrosine kinas 100.0 1.4E-40 3E-45 345.3 13.9 254 408-713 272-527 (1157)
37 cd05595 STKc_PKB_beta Catalyti 100.0 1.3E-39 2.9E-44 344.7 21.5 240 410-704 2-250 (323)
38 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.9E-39 6.3E-44 332.7 23.0 250 408-709 10-265 (266)
39 cd05104 PTKc_Kit Catalytic dom 100.0 2.4E-39 5.2E-44 349.6 23.1 268 395-709 29-374 (375)
40 cd05593 STKc_PKB_gamma Catalyt 100.0 1.5E-39 3.1E-44 345.1 20.7 240 410-704 2-250 (328)
41 KOG0580 Serine/threonine prote 100.0 4.7E-40 1E-44 307.0 14.4 251 397-704 18-272 (281)
42 KOG0588 Serine/threonine prote 100.0 7.4E-40 1.6E-44 344.7 17.7 240 409-704 18-262 (786)
43 KOG1094 Discoidin domain recep 100.0 4.6E-40 1E-44 340.4 15.8 260 408-710 543-805 (807)
44 KOG3653 Transforming growth fa 100.0 2E-39 4.3E-44 329.7 20.1 262 410-713 217-507 (534)
45 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-39 5.2E-44 336.8 20.8 246 409-704 6-260 (285)
46 KOG0658 Glycogen synthase kina 100.0 2.1E-40 4.6E-45 329.0 12.1 256 408-704 29-305 (364)
47 cd05612 STKc_PRKX_like Catalyt 100.0 1.4E-39 3E-44 339.6 18.7 238 409-704 7-253 (291)
48 PTZ00263 protein kinase A cata 100.0 1.5E-39 3.2E-44 345.3 18.9 238 408-703 23-269 (329)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 2.2E-39 4.7E-44 349.5 20.4 267 397-710 34-373 (374)
50 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-38 3.3E-43 325.3 25.2 246 409-707 10-256 (256)
51 cd05584 STKc_p70S6K Catalytic 100.0 4.3E-39 9.3E-44 341.0 20.9 241 409-704 2-255 (323)
52 KOG2345 Serine/threonine prote 100.0 5.5E-40 1.2E-44 307.8 12.0 266 409-710 27-301 (302)
53 KOG0694 Serine/threonine prote 100.0 2.8E-39 6E-44 343.5 18.6 235 409-699 374-613 (694)
54 cd06649 PKc_MEK2 Catalytic dom 100.0 9.5E-39 2.1E-43 339.5 22.9 192 409-638 11-204 (331)
55 KOG0611 Predicted serine/threo 100.0 6.2E-40 1.4E-44 325.6 12.7 239 410-705 60-303 (668)
56 PF07714 Pkinase_Tyr: Protein 100.0 2.3E-39 4.9E-44 332.0 16.6 248 409-706 5-259 (259)
57 KOG1989 ARK protein kinase fam 100.0 2.7E-39 6E-44 354.6 17.4 261 407-711 41-313 (738)
58 cd05093 PTKc_TrkB Catalytic do 100.0 3.5E-38 7.7E-43 328.6 25.0 260 409-714 11-284 (288)
59 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-38 2.4E-43 327.3 20.7 249 409-709 12-261 (261)
60 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.3E-38 4.9E-43 330.0 22.9 257 409-704 11-284 (288)
61 PTZ00426 cAMP-dependent protei 100.0 6E-39 1.3E-43 341.5 18.8 239 408-704 35-283 (340)
62 KOG0594 Protein kinase PCTAIRE 100.0 1.5E-38 3.3E-43 316.7 20.4 260 410-705 18-302 (323)
63 cd05590 STKc_nPKC_eta Catalyti 100.0 8.3E-39 1.8E-43 338.2 19.6 236 410-700 2-242 (320)
64 cd05052 PTKc_Abl Catalytic dom 100.0 5.3E-38 1.1E-42 322.7 24.9 250 409-710 12-263 (263)
65 cd05591 STKc_nPKC_epsilon Cata 100.0 8.5E-39 1.8E-43 338.5 19.5 240 410-704 2-253 (321)
66 cd05594 STKc_PKB_alpha Catalyt 100.0 4.9E-39 1.1E-43 341.0 17.6 241 410-704 2-251 (325)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-38 3.2E-43 338.5 21.2 247 409-705 7-257 (333)
68 cd05592 STKc_nPKC_theta_delta 100.0 1.4E-38 3E-43 335.9 20.7 239 410-703 2-246 (316)
69 KOG0574 STE20-like serine/thre 100.0 2.3E-40 5E-45 317.1 6.4 239 410-704 40-282 (502)
70 cd05048 PTKc_Ror Catalytic Dom 100.0 4.4E-38 9.5E-43 327.0 24.1 255 409-709 11-283 (283)
71 cd05105 PTKc_PDGFR_alpha Catal 100.0 2E-38 4.3E-43 343.4 22.3 259 408-711 42-399 (400)
72 cd05618 STKc_aPKC_iota Catalyt 100.0 1.3E-38 2.8E-43 338.0 20.5 241 410-699 2-250 (329)
73 cd05608 STKc_GRK1 Catalytic do 100.0 2E-38 4.3E-43 329.0 21.2 247 411-704 1-256 (280)
74 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.5E-38 7.5E-43 323.6 22.8 249 409-709 12-261 (261)
75 cd07848 STKc_CDKL5 Catalytic d 100.0 1E-38 2.2E-43 332.4 19.1 258 409-704 7-283 (287)
76 cd05108 PTKc_EGFR Catalytic do 100.0 3E-38 6.5E-43 333.7 22.8 252 409-712 13-271 (316)
77 cd05588 STKc_aPKC Catalytic do 100.0 1.6E-38 3.6E-43 337.3 20.8 240 410-698 2-249 (329)
78 KOG4257 Focal adhesion tyrosin 100.0 1.3E-38 2.8E-43 331.4 19.3 263 396-711 382-651 (974)
79 KOG0660 Mitogen-activated prot 100.0 3.4E-39 7.3E-44 319.9 14.2 258 409-704 28-309 (359)
80 cd05094 PTKc_TrkC Catalytic do 100.0 6E-38 1.3E-42 327.4 24.4 258 409-712 11-285 (291)
81 cd05582 STKc_RSK_N N-terminal 100.0 3.4E-39 7.3E-44 341.1 15.0 238 409-701 2-245 (318)
82 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-38 3.7E-43 335.2 20.3 239 410-703 2-246 (316)
83 cd05619 STKc_nPKC_theta Cataly 100.0 2.2E-38 4.7E-43 334.3 21.1 239 410-703 2-246 (316)
84 cd05049 PTKc_Trk Catalytic dom 100.0 5.3E-38 1.1E-42 325.8 23.6 254 409-708 11-280 (280)
85 cd05068 PTKc_Frk_like Catalyti 100.0 6.6E-38 1.4E-42 321.6 24.0 249 409-709 12-261 (261)
86 cd06650 PKc_MEK1 Catalytic dom 100.0 7.6E-38 1.7E-42 332.7 25.1 192 409-638 11-204 (333)
87 cd05033 PTKc_EphR Catalytic do 100.0 9E-38 1.9E-42 321.6 24.7 252 408-710 9-266 (266)
88 PTZ00267 NIMA-related protein 100.0 3E-38 6.5E-43 351.3 22.7 249 408-704 72-322 (478)
89 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-38 4.3E-43 333.0 20.0 258 409-704 11-287 (303)
90 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-38 4.6E-43 334.9 20.3 240 410-704 2-251 (318)
91 PHA03212 serine/threonine kina 100.0 4.4E-38 9.6E-43 340.5 23.2 253 409-704 98-375 (391)
92 cd05113 PTKc_Btk_Bmx Catalytic 100.0 9.7E-38 2.1E-42 319.4 24.4 246 409-707 10-256 (256)
93 PLN00034 mitogen-activated pro 100.0 3.8E-38 8.2E-43 338.0 22.3 241 409-704 80-327 (353)
94 KOG0589 Serine/threonine prote 100.0 5.7E-39 1.2E-43 333.7 15.3 245 409-705 10-258 (426)
95 cd08228 STKc_Nek6 Catalytic do 100.0 4.6E-38 1E-42 323.8 22.0 255 409-710 8-266 (267)
96 cd05084 PTKc_Fes Catalytic dom 100.0 9.4E-38 2E-42 318.7 23.9 248 410-708 2-252 (252)
97 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-38 3.4E-43 336.7 18.8 236 410-700 2-242 (323)
98 cd05607 STKc_GRK7 Catalytic do 100.0 4.5E-38 9.7E-43 325.8 21.2 247 411-706 1-251 (277)
99 KOG0585 Ca2+/calmodulin-depend 100.0 3E-38 6.5E-43 320.8 19.3 247 410-704 104-371 (576)
100 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.2E-38 7E-43 328.2 20.2 258 409-710 10-284 (284)
101 cd05111 PTK_HER3 Pseudokinase 100.0 1.6E-37 3.5E-42 322.0 25.2 253 409-713 13-272 (279)
102 cd05075 PTKc_Axl Catalytic dom 100.0 1.3E-37 2.9E-42 321.3 24.1 255 409-709 5-271 (272)
103 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.2E-38 1.4E-42 325.9 21.3 265 409-710 10-282 (283)
104 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-37 2.8E-42 318.6 23.3 250 410-710 2-256 (257)
105 cd05589 STKc_PKN Catalytic dom 100.0 6.6E-38 1.4E-42 332.1 21.6 240 409-704 5-256 (324)
106 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-37 5.3E-42 316.6 25.1 248 410-709 2-255 (257)
107 cd05054 PTKc_VEGFR Catalytic d 100.0 6.4E-38 1.4E-42 333.5 21.4 259 409-712 13-336 (337)
108 cd05045 PTKc_RET Catalytic dom 100.0 8.3E-38 1.8E-42 326.2 21.5 259 409-713 6-290 (290)
109 cd05614 STKc_MSK2_N N-terminal 100.0 5.2E-38 1.1E-42 334.3 20.3 246 409-704 6-266 (332)
110 cd05059 PTKc_Tec_like Catalyti 100.0 9.6E-38 2.1E-42 319.4 21.3 246 409-707 10-256 (256)
111 cd05035 PTKc_Axl_like Catalyti 100.0 1.7E-37 3.8E-42 320.5 23.4 255 409-709 5-272 (273)
112 cd05085 PTKc_Fer Catalytic dom 100.0 2.4E-37 5.2E-42 315.2 24.1 246 410-707 2-249 (250)
113 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-37 2.9E-42 336.7 23.1 258 408-710 42-400 (401)
114 cd05587 STKc_cPKC Catalytic do 100.0 6.8E-38 1.5E-42 332.0 20.3 236 409-699 6-246 (324)
115 cd05097 PTKc_DDR_like Catalyti 100.0 2.7E-37 5.8E-42 323.1 24.5 261 409-708 11-295 (295)
116 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1E-37 2.2E-42 332.9 21.8 259 409-704 6-289 (338)
117 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.8E-37 4E-42 320.6 22.9 239 410-707 2-274 (274)
118 cd05058 PTKc_Met_Ron Catalytic 100.0 3.9E-37 8.4E-42 316.0 25.2 253 410-711 2-261 (262)
119 cd05604 STKc_SGK3 Catalytic do 100.0 3.1E-38 6.7E-43 334.8 17.5 241 410-705 2-247 (325)
120 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-37 3.2E-42 324.8 22.2 258 408-711 17-293 (293)
121 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.9E-38 1.7E-42 331.8 20.4 242 410-700 2-249 (327)
122 cd05602 STKc_SGK1 Catalytic do 100.0 5.5E-38 1.2E-42 332.9 19.1 241 410-705 2-247 (325)
123 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1E-37 2.3E-42 320.3 20.4 238 410-706 2-261 (262)
124 cd05062 PTKc_IGF-1R Catalytic 100.0 2.2E-37 4.7E-42 320.7 22.8 254 409-708 12-277 (277)
125 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-37 3E-42 337.1 22.2 273 409-704 7-304 (381)
126 cd05603 STKc_SGK2 Catalytic do 100.0 5.6E-38 1.2E-42 332.3 18.7 236 410-700 2-242 (321)
127 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.2E-37 6.9E-42 316.4 23.7 247 409-708 12-259 (260)
128 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-37 3.4E-42 319.8 21.5 255 409-710 8-266 (267)
129 KOG0610 Putative serine/threon 100.0 2.2E-37 4.8E-42 310.5 21.7 271 410-703 84-390 (459)
130 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.1E-37 6.7E-42 318.2 23.6 255 410-707 2-268 (269)
131 cd05090 PTKc_Ror1 Catalytic do 100.0 2.9E-37 6.2E-42 320.9 23.5 254 409-708 11-282 (283)
132 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-37 3E-42 324.4 21.1 257 409-704 7-286 (290)
133 cd05071 PTKc_Src Catalytic dom 100.0 4.5E-37 9.7E-42 315.6 24.6 249 409-710 12-261 (262)
134 cd05060 PTKc_Syk_like Catalyti 100.0 3E-37 6.5E-42 316.0 23.2 249 410-710 2-256 (257)
135 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.3E-37 7.3E-42 317.6 23.7 253 408-710 10-268 (268)
136 KOG0599 Phosphorylase kinase g 100.0 1.9E-38 4.1E-43 300.5 13.0 244 409-704 23-282 (411)
137 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.7E-37 7.9E-42 323.6 24.2 259 408-712 20-299 (304)
138 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.5E-37 9.7E-42 316.3 24.2 255 409-710 8-266 (267)
139 cd05047 PTKc_Tie Catalytic dom 100.0 4.1E-37 8.9E-42 317.4 23.9 252 410-710 2-269 (270)
140 cd05091 PTKc_Ror2 Catalytic do 100.0 3E-37 6.5E-42 320.7 22.8 254 409-708 11-282 (283)
141 PTZ00283 serine/threonine prot 100.0 1.4E-37 3.1E-42 346.0 21.6 248 409-704 38-296 (496)
142 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-37 3.5E-42 323.0 20.6 246 409-704 6-260 (285)
143 KOG0667 Dual-specificity tyros 100.0 7.1E-38 1.5E-42 333.1 18.2 254 409-704 192-501 (586)
144 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-37 2.7E-42 323.8 19.7 257 409-710 10-284 (284)
145 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-37 2.6E-42 330.0 19.9 236 409-699 6-246 (323)
146 cd05069 PTKc_Yes Catalytic dom 100.0 3.6E-37 7.8E-42 316.0 22.8 247 409-708 12-259 (260)
147 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-37 1E-41 314.5 23.4 250 410-708 2-257 (257)
148 cd05055 PTKc_PDGFR Catalytic d 100.0 3.4E-37 7.4E-42 323.3 22.8 253 408-709 40-301 (302)
149 cd05109 PTKc_HER2 Catalytic do 100.0 3.2E-37 7E-42 319.8 22.3 252 409-712 13-271 (279)
150 KOG4279 Serine/threonine prote 100.0 1.2E-38 2.6E-43 334.7 11.3 246 408-704 580-831 (1226)
151 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-37 8.3E-42 325.5 22.9 200 408-638 6-218 (317)
152 cd05089 PTKc_Tie1 Catalytic do 100.0 5.5E-37 1.2E-41 321.1 23.8 255 409-712 8-278 (297)
153 cd05065 PTKc_EphR_B Catalytic 100.0 3.2E-37 6.9E-42 318.0 21.4 254 408-709 9-268 (269)
154 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-37 6.4E-42 317.8 21.1 247 409-705 15-265 (267)
155 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-37 4E-42 334.2 20.4 246 408-704 48-303 (370)
156 cd05092 PTKc_TrkA Catalytic do 100.0 5.1E-37 1.1E-41 318.5 22.8 254 409-708 11-280 (280)
157 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.5E-37 7.6E-42 316.0 21.4 247 409-708 12-259 (260)
158 cd05601 STKc_CRIK Catalytic do 100.0 6.9E-38 1.5E-42 333.0 16.5 246 409-704 7-262 (330)
159 cd05599 STKc_NDR_like Catalyti 100.0 1.7E-37 3.7E-42 334.6 19.6 272 409-704 7-295 (364)
160 KOG0033 Ca2+/calmodulin-depend 100.0 6.2E-39 1.3E-43 299.5 7.2 244 409-704 17-266 (355)
161 cd06654 STKc_PAK1 Catalytic do 100.0 4.2E-37 9.2E-42 321.7 21.8 243 409-704 26-269 (296)
162 KOG0577 Serine/threonine prote 100.0 4.7E-38 1E-42 325.3 14.1 238 410-704 33-277 (948)
163 cd05082 PTKc_Csk Catalytic dom 100.0 6.5E-37 1.4E-41 313.3 22.5 243 409-709 12-256 (256)
164 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.1E-37 1.5E-41 321.8 23.4 259 408-712 23-302 (307)
165 cd05615 STKc_cPKC_alpha Cataly 100.0 3.2E-37 6.9E-42 326.6 20.8 236 409-699 6-246 (323)
166 cd05051 PTKc_DDR Catalytic dom 100.0 7.3E-37 1.6E-41 319.9 23.3 261 409-708 11-296 (296)
167 cd05032 PTKc_InsR_like Catalyt 100.0 6.4E-37 1.4E-41 317.1 22.6 255 408-708 11-277 (277)
168 cd05628 STKc_NDR1 Catalytic do 100.0 4.3E-37 9.3E-42 331.1 22.0 220 409-637 7-237 (363)
169 cd05066 PTKc_EphR_A Catalytic 100.0 8.8E-37 1.9E-41 314.4 23.4 253 408-710 9-267 (267)
170 cd05103 PTKc_VEGFR2 Catalytic 100.0 9E-37 1.9E-41 325.9 24.1 260 408-712 12-342 (343)
171 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.6E-37 5.7E-42 316.6 19.2 239 410-707 2-258 (258)
172 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-37 2.4E-42 334.4 17.1 272 409-704 7-284 (350)
173 cd08529 STKc_FA2-like Catalyti 100.0 7.4E-37 1.6E-41 312.6 22.5 244 409-704 6-252 (256)
174 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.4E-36 3E-41 313.1 24.6 254 410-707 2-267 (268)
175 cd05039 PTKc_Csk_like Catalyti 100.0 1.4E-36 3.1E-41 310.7 24.5 244 409-709 12-256 (256)
176 cd06643 STKc_SLK Catalytic dom 100.0 6.6E-37 1.4E-41 318.0 22.2 245 409-704 11-261 (282)
177 cd05043 PTK_Ryk Pseudokinase d 100.0 1.2E-36 2.5E-41 315.8 23.6 259 408-712 11-279 (280)
178 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-36 3E-41 317.9 24.3 261 409-708 11-296 (296)
179 cd00192 PTKc Catalytic domain 100.0 1.4E-36 2.9E-41 311.4 23.6 252 410-707 2-262 (262)
180 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-36 2.4E-41 315.7 23.3 243 409-705 7-253 (279)
181 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.9E-37 1.9E-41 312.6 22.2 237 410-707 2-259 (259)
182 cd05112 PTKc_Itk Catalytic dom 100.0 1.8E-36 3.9E-41 309.9 24.4 246 409-707 10-256 (256)
183 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-36 2.3E-41 315.6 22.9 254 409-708 12-277 (277)
184 cd05088 PTKc_Tie2 Catalytic do 100.0 9.6E-37 2.1E-41 320.1 22.7 254 409-711 13-282 (303)
185 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-36 2.9E-41 323.6 24.1 259 408-712 17-296 (334)
186 PHA03211 serine/threonine kina 100.0 9.1E-37 2E-41 334.2 23.4 255 409-704 175-454 (461)
187 cd07853 STKc_NLK Catalytic dom 100.0 8.5E-37 1.8E-41 330.0 22.8 257 409-704 6-287 (372)
188 cd05061 PTKc_InsR Catalytic do 100.0 1.6E-36 3.4E-41 316.2 23.8 257 409-711 12-280 (288)
189 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-36 3.5E-41 309.3 23.3 248 410-708 2-251 (251)
190 cd05042 PTKc_Aatyk Catalytic d 100.0 2.1E-36 4.5E-41 312.0 24.3 255 410-707 2-268 (269)
191 cd05034 PTKc_Src_like Catalyti 100.0 8.6E-37 1.9E-41 313.2 21.3 248 409-708 12-260 (261)
192 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.6E-36 3.4E-41 320.2 23.7 258 408-711 17-295 (314)
193 cd06624 STKc_ASK Catalytic dom 100.0 1.5E-36 3.3E-41 312.7 22.9 247 409-704 14-264 (268)
194 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.8E-37 2.1E-41 321.1 21.8 257 409-704 12-285 (309)
195 cd05621 STKc_ROCK2 Catalytic d 100.0 4.7E-37 1E-41 330.7 19.7 246 409-705 49-304 (370)
196 cd05598 STKc_LATS Catalytic do 100.0 3.7E-37 8E-42 333.4 18.9 272 409-704 7-300 (376)
197 cd05625 STKc_LATS1 Catalytic d 100.0 6.4E-37 1.4E-41 332.2 20.7 221 409-638 7-250 (382)
198 cd06644 STKc_STK10_LOK Catalyt 100.0 1.3E-36 2.8E-41 317.4 22.3 244 410-704 19-268 (292)
199 PTZ00036 glycogen synthase kin 100.0 3.9E-37 8.5E-42 338.4 19.1 256 408-704 71-350 (440)
200 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.9E-36 4.1E-41 314.6 23.2 258 409-710 10-284 (284)
201 cd05629 STKc_NDR_like_fungal C 100.0 5.1E-37 1.1E-41 332.4 19.6 273 409-705 7-305 (377)
202 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-36 2.7E-41 316.4 21.6 246 409-704 6-260 (285)
203 cd05050 PTKc_Musk Catalytic do 100.0 1.7E-36 3.6E-41 316.0 22.4 254 409-708 11-288 (288)
204 cd07876 STKc_JNK2 Catalytic do 100.0 1.4E-36 3.1E-41 326.7 22.6 255 409-704 27-314 (359)
205 PRK13184 pknD serine/threonine 100.0 1.3E-36 2.8E-41 346.6 23.3 275 409-711 8-292 (932)
206 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-36 2.9E-41 313.3 21.4 253 410-708 2-269 (269)
207 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-36 3E-41 311.6 21.2 247 409-708 12-259 (260)
208 cd06615 PKc_MEK Catalytic doma 100.0 1.9E-36 4E-41 318.7 22.6 257 409-705 7-287 (308)
209 KOG0199 ACK and related non-re 100.0 1.3E-37 2.7E-42 328.0 13.5 248 409-706 116-369 (1039)
210 KOG0579 Ste20-like serine/thre 100.0 9.2E-38 2E-42 324.9 11.8 244 410-704 39-288 (1187)
211 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-36 2.9E-41 316.1 20.6 246 409-704 6-260 (285)
212 cd05056 PTKc_FAK Catalytic dom 100.0 3.7E-36 8E-41 310.3 23.8 252 408-712 11-268 (270)
213 cd06625 STKc_MEKK3_like Cataly 100.0 2.9E-36 6.3E-41 309.6 22.9 248 408-705 7-260 (263)
214 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-36 2.6E-41 314.2 20.1 244 409-704 12-268 (272)
215 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-36 3.1E-41 317.6 20.9 243 409-704 25-268 (296)
216 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-36 4.1E-41 309.6 21.3 243 409-704 9-252 (256)
217 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-36 3E-41 321.1 21.0 200 408-638 6-218 (317)
218 cd06656 STKc_PAK3 Catalytic do 100.0 1.9E-36 4.2E-41 316.8 21.8 243 409-704 25-268 (297)
219 KOG2052 Activin A type IB rece 100.0 3.8E-37 8.3E-42 310.8 15.7 264 408-712 216-506 (513)
220 cd06645 STKc_MAP4K3 Catalytic 100.0 2.9E-36 6.4E-41 310.4 22.8 246 409-704 15-264 (267)
221 cd08219 STKc_Nek3 Catalytic do 100.0 2E-36 4.3E-41 309.5 21.3 245 409-705 6-252 (255)
222 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-36 3.2E-41 322.3 21.1 202 409-638 4-212 (327)
223 PHA03209 serine/threonine kina 100.0 1.7E-36 3.7E-41 325.3 21.7 186 408-637 71-257 (357)
224 cd05586 STKc_Sck1_like Catalyt 100.0 3.5E-37 7.6E-42 327.5 16.2 235 411-699 1-243 (330)
225 cd06631 STKc_YSK4 Catalytic do 100.0 5.3E-36 1.1E-40 308.2 24.3 251 408-704 5-261 (265)
226 cd05057 PTKc_EGFR_like Catalyt 100.0 4.7E-36 1E-40 311.1 23.8 252 409-712 13-271 (279)
227 PHA03207 serine/threonine kina 100.0 2E-36 4.4E-41 328.9 21.7 254 409-704 98-374 (392)
228 cd07874 STKc_JNK3 Catalytic do 100.0 1.4E-36 3E-41 326.3 20.2 255 409-705 23-311 (355)
229 KOG1025 Epidermal growth facto 100.0 7.2E-38 1.6E-42 335.1 9.6 258 402-711 695-959 (1177)
230 cd05110 PTKc_HER4 Catalytic do 100.0 5.4E-36 1.2E-40 314.5 23.8 252 409-712 13-271 (303)
231 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-36 3.9E-41 326.5 20.5 247 408-705 48-304 (371)
232 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-36 3.7E-41 316.4 19.6 244 409-705 28-272 (292)
233 cd06611 STKc_SLK_like Catalyti 100.0 1.9E-36 4.1E-41 314.2 19.8 244 410-704 12-261 (280)
234 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-35 2.7E-40 304.7 25.5 247 409-704 9-259 (262)
235 cd07861 STKc_CDK1_euk Catalyti 100.0 5.4E-36 1.2E-40 311.5 23.1 260 409-704 6-281 (285)
236 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.9E-36 1.1E-40 311.8 22.4 248 409-705 11-266 (284)
237 cd06659 STKc_PAK6 Catalytic do 100.0 1.8E-36 3.9E-41 317.0 18.7 242 410-704 28-270 (297)
238 KOG0596 Dual specificity; seri 100.0 4.6E-37 1E-41 317.3 13.7 246 409-704 367-626 (677)
239 cd07875 STKc_JNK1 Catalytic do 100.0 3.5E-36 7.7E-41 324.3 21.3 254 409-704 30-317 (364)
240 cd07863 STKc_CDK4 Catalytic do 100.0 5.3E-36 1.1E-40 312.2 21.5 257 409-704 6-284 (288)
241 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.2E-36 1.1E-40 310.4 21.3 241 409-704 10-252 (277)
242 PTZ00284 protein kinase; Provi 100.0 4.3E-36 9.2E-41 333.9 21.9 253 409-704 135-437 (467)
243 KOG0032 Ca2+/calmodulin-depend 100.0 3.6E-36 7.9E-41 318.1 20.2 243 409-704 41-292 (382)
244 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.3E-36 7.2E-41 315.8 19.7 257 409-704 12-285 (301)
245 cd05597 STKc_DMPK_like Catalyt 100.0 4.6E-36 1E-40 318.8 20.8 249 409-705 7-266 (331)
246 cd05083 PTKc_Chk Catalytic dom 100.0 8.5E-36 1.8E-40 304.6 22.0 242 408-708 11-253 (254)
247 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-35 3E-40 305.3 23.5 248 409-704 6-263 (267)
248 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-35 2.8E-40 306.6 22.9 255 409-709 5-272 (273)
249 PF00069 Pkinase: Protein kina 100.0 3.2E-36 6.9E-41 308.6 18.0 248 409-704 5-256 (260)
250 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-35 3.3E-40 303.1 22.7 245 409-705 6-253 (256)
251 cd06609 STKc_MST3_like Catalyt 100.0 8.5E-36 1.8E-40 308.3 21.0 242 409-704 7-250 (274)
252 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-35 2.5E-40 307.4 22.0 253 410-708 12-275 (275)
253 cd08223 STKc_Nek4 Catalytic do 100.0 1.7E-35 3.7E-40 302.8 23.0 244 409-704 6-253 (257)
254 cd07839 STKc_CDK5 Catalytic do 100.0 3.7E-36 8E-41 312.7 18.3 258 409-704 6-280 (284)
255 PTZ00266 NIMA-related protein 100.0 7.6E-36 1.6E-40 341.5 22.4 248 409-704 19-294 (1021)
256 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-36 4.7E-41 325.3 17.0 221 409-638 7-238 (360)
257 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-35 6.3E-40 304.8 24.4 242 409-705 10-253 (277)
258 cd05623 STKc_MRCK_alpha Cataly 100.0 5.9E-36 1.3E-40 318.2 19.6 249 409-705 7-266 (332)
259 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.5E-35 3.2E-40 308.5 22.1 247 409-704 7-261 (286)
260 KOG0584 Serine/threonine prote 100.0 1.6E-36 3.5E-41 319.4 14.6 240 409-704 46-295 (632)
261 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.6E-36 1.9E-40 318.7 20.5 250 409-704 21-297 (343)
262 cd06638 STKc_myosinIIIA Cataly 100.0 9.3E-36 2E-40 310.0 20.2 248 409-705 24-283 (286)
263 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.1E-35 6.8E-40 305.9 24.2 257 409-704 7-282 (286)
264 cd08528 STKc_Nek10 Catalytic d 100.0 2E-35 4.3E-40 304.6 22.5 251 409-708 6-269 (269)
265 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.5E-35 7.6E-40 305.9 24.3 255 409-704 7-265 (287)
266 cd05624 STKc_MRCK_beta Catalyt 100.0 4.6E-36 1E-40 318.8 17.8 248 409-704 7-265 (331)
267 cd06648 STKc_PAK_II Catalytic 100.0 3.2E-35 7E-40 305.7 23.8 243 409-704 25-268 (285)
268 cd06651 STKc_MEKK3 Catalytic d 100.0 3.1E-35 6.7E-40 302.7 23.2 246 408-704 7-260 (266)
269 cd05609 STKc_MAST Catalytic do 100.0 3.6E-35 7.7E-40 308.6 23.8 263 409-708 7-273 (305)
270 cd07844 STKc_PCTAIRE_like Cata 100.0 1.2E-35 2.5E-40 310.1 19.9 258 409-704 11-287 (291)
271 smart00219 TyrKc Tyrosine kina 100.0 2.7E-35 5.9E-40 301.2 22.2 247 409-706 5-258 (258)
272 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-35 5.2E-40 301.7 21.8 242 409-704 6-254 (258)
273 cd08218 STKc_Nek1 Catalytic do 100.0 1.8E-35 3.8E-40 302.6 20.7 244 409-704 6-252 (256)
274 cd06647 STKc_PAK_I Catalytic d 100.0 1.9E-35 4.2E-40 308.6 21.4 244 409-705 25-269 (293)
275 KOG0607 MAP kinase-interacting 100.0 3.5E-36 7.6E-41 291.1 14.3 267 399-704 74-360 (463)
276 cd06605 PKc_MAPKK Catalytic do 100.0 2.8E-35 6E-40 302.7 21.9 247 410-704 8-256 (265)
277 cd06630 STKc_MEKK1 Catalytic d 100.0 2.3E-35 4.9E-40 303.9 21.3 250 409-704 6-263 (268)
278 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-35 5.8E-40 305.3 21.9 241 410-704 1-254 (279)
279 cd07846 STKc_CDKL2_3 Catalytic 100.0 8.8E-36 1.9E-40 310.1 17.9 257 409-704 7-282 (286)
280 cd07860 STKc_CDK2_3 Catalytic 100.0 2.1E-35 4.6E-40 306.9 20.7 257 409-704 6-280 (284)
281 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.9E-35 8.5E-40 302.9 22.2 249 409-704 7-268 (272)
282 cd06639 STKc_myosinIIIB Cataly 100.0 2.5E-35 5.4E-40 307.6 20.9 247 409-704 28-286 (291)
283 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.7E-35 3.7E-40 307.4 19.5 244 409-704 22-278 (282)
284 cd08220 STKc_Nek8 Catalytic do 100.0 5.7E-35 1.2E-39 298.6 23.0 243 409-704 6-252 (256)
285 cd05580 STKc_PKA Catalytic dom 100.0 3.8E-35 8.2E-40 306.1 22.0 237 409-703 7-252 (290)
286 cd06657 STKc_PAK4 Catalytic do 100.0 4.3E-35 9.3E-40 305.8 22.0 243 409-704 26-269 (292)
287 cd07841 STKc_CDK7 Catalytic do 100.0 4E-35 8.8E-40 307.1 21.9 258 409-705 6-282 (298)
288 cd06652 STKc_MEKK2 Catalytic d 100.0 7.2E-35 1.6E-39 299.7 23.3 246 408-704 7-260 (265)
289 cd06607 STKc_TAO Catalytic dom 100.0 8.2E-35 1.8E-39 306.1 24.0 239 409-704 21-266 (307)
290 cd05574 STKc_phototropin_like 100.0 5E-35 1.1E-39 309.2 22.2 273 409-704 7-288 (316)
291 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-34 3.7E-39 299.0 25.5 241 409-704 10-252 (277)
292 cd07833 STKc_CDKL Catalytic do 100.0 2.3E-35 5E-40 307.2 19.0 258 409-704 7-284 (288)
293 cd06917 STKc_NAK1_like Catalyt 100.0 5E-35 1.1E-39 303.0 21.4 242 409-704 7-254 (277)
294 cd05577 STKc_GRK Catalytic dom 100.0 6.5E-35 1.4E-39 302.2 22.2 243 411-703 1-252 (277)
295 cd05572 STKc_cGK_PKG Catalytic 100.0 7.7E-35 1.7E-39 299.0 22.5 242 411-704 1-251 (262)
296 KOG4250 TANK binding protein k 100.0 5.1E-36 1.1E-40 319.4 14.1 266 409-710 19-311 (732)
297 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.1E-35 8.9E-40 306.0 20.6 258 409-704 11-287 (291)
298 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1E-34 2.2E-39 298.7 23.2 254 409-704 7-263 (267)
299 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.7E-35 1E-39 304.1 20.9 246 409-704 7-260 (283)
300 cd07832 STKc_CCRK Catalytic do 100.0 5.4E-35 1.2E-39 304.1 21.3 258 409-704 6-281 (286)
301 cd06616 PKc_MKK4 Catalytic dom 100.0 9.2E-35 2E-39 302.8 22.8 248 409-704 10-266 (288)
302 cd06608 STKc_myosinIII_like Ca 100.0 4.9E-35 1.1E-39 302.3 20.2 247 409-704 12-271 (275)
303 KOG0986 G protein-coupled rece 100.0 2.8E-36 6E-41 304.5 10.4 241 409-699 191-435 (591)
304 KOG4717 Serine/threonine prote 100.0 1.5E-35 3.3E-40 302.3 15.8 240 410-704 25-269 (864)
305 cd06614 STKc_PAK Catalytic dom 100.0 6.8E-35 1.5E-39 303.5 21.2 243 410-704 26-269 (286)
306 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-34 2.3E-39 297.6 22.2 242 410-706 3-249 (260)
307 cd06626 STKc_MEKK4 Catalytic d 100.0 1.9E-34 4E-39 296.3 23.8 249 409-704 6-260 (264)
308 cd08225 STKc_Nek5 Catalytic do 100.0 5.8E-35 1.3E-39 298.8 20.0 244 409-704 6-253 (257)
309 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-34 2.6E-39 297.5 22.3 246 409-704 6-261 (265)
310 KOG0666 Cyclin C-dependent kin 100.0 1.1E-35 2.5E-40 286.7 13.4 198 409-636 30-240 (438)
311 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-34 2.5E-39 301.2 22.0 259 409-704 5-279 (283)
312 cd07843 STKc_CDC2L1 Catalytic 100.0 6.8E-35 1.5E-39 304.6 20.3 257 409-704 11-289 (293)
313 cd06635 STKc_TAO1 Catalytic do 100.0 3.2E-34 7E-39 303.0 25.1 241 409-706 31-278 (317)
314 cd05606 STKc_beta_ARK Catalyti 100.0 2.1E-34 4.7E-39 298.4 22.6 241 410-704 1-254 (278)
315 cd05579 STKc_MAST_like Catalyt 100.0 8.4E-35 1.8E-39 298.7 19.1 252 411-707 1-256 (265)
316 PHA03390 pk1 serine/threonine- 100.0 2.1E-34 4.7E-39 296.5 22.1 234 411-704 24-261 (267)
317 cd08226 PK_STRAD_beta Pseudoki 100.0 5.2E-34 1.1E-38 302.9 25.2 261 410-704 5-307 (328)
318 KOG0983 Mitogen-activated prot 100.0 2.1E-35 4.6E-40 280.1 12.8 254 398-704 89-348 (391)
319 cd05578 STKc_Yank1 Catalytic d 100.0 6.7E-35 1.4E-39 298.7 17.4 242 409-703 6-253 (258)
320 cd06623 PKc_MAPKK_plant_like C 100.0 3.7E-34 8.1E-39 293.9 23.0 248 409-705 7-256 (264)
321 cd08216 PK_STRAD Pseudokinase 100.0 3.1E-34 6.7E-39 302.8 22.9 264 411-704 10-294 (314)
322 PHA02882 putative serine/threo 100.0 3.7E-34 8E-39 299.1 23.1 258 409-707 18-294 (294)
323 KOG0604 MAP kinase-activated p 100.0 1.5E-35 3.3E-40 284.7 11.2 252 402-704 61-321 (400)
324 cd07831 STKc_MOK Catalytic dom 100.0 3.4E-34 7.3E-39 297.5 22.4 255 409-704 5-278 (282)
325 KOG0200 Fibroblast/platelet-de 100.0 9.1E-35 2E-39 329.3 19.3 271 394-710 289-580 (609)
326 cd07836 STKc_Pho85 Catalytic d 100.0 3.8E-34 8.1E-39 297.5 22.2 258 409-704 6-280 (284)
327 cd07850 STKc_JNK Catalytic dom 100.0 3.5E-34 7.5E-39 307.4 22.6 253 409-704 22-310 (353)
328 KOG0586 Serine/threonine prote 100.0 4.4E-35 9.6E-40 308.4 15.2 239 410-704 63-305 (596)
329 PTZ00024 cyclin-dependent prot 100.0 2.3E-34 5E-39 306.6 20.9 270 409-704 15-312 (335)
330 cd05122 PKc_STE Catalytic doma 100.0 2.6E-34 5.6E-39 292.5 20.4 244 409-704 6-250 (253)
331 cd07842 STKc_CDK8_like Catalyt 100.0 3.1E-34 6.7E-39 303.0 21.6 201 409-639 6-219 (316)
332 PLN00009 cyclin-dependent kina 100.0 3.4E-34 7.3E-39 299.5 21.5 256 409-704 8-283 (294)
333 cd07840 STKc_CDK9_like Catalyt 100.0 3.8E-34 8.2E-39 297.7 21.8 258 409-704 5-283 (287)
334 KOG1006 Mitogen-activated prot 100.0 4.3E-36 9.3E-41 283.9 6.2 263 396-704 59-326 (361)
335 cd07865 STKc_CDK9 Catalytic do 100.0 4.1E-34 8.8E-39 301.2 21.8 261 409-704 18-306 (310)
336 cd05583 STKc_MSK_N N-terminal 100.0 2.9E-34 6.4E-39 299.0 20.4 250 409-708 6-266 (288)
337 cd07845 STKc_CDK10 Catalytic d 100.0 4.8E-34 1E-38 300.6 22.0 257 409-704 13-289 (309)
338 cd06618 PKc_MKK7 Catalytic dom 100.0 1.9E-34 4.2E-39 301.7 18.9 247 408-705 20-273 (296)
339 cd07837 STKc_CdkB_plant Cataly 100.0 4.7E-34 1E-38 298.6 21.7 258 409-704 7-290 (295)
340 cd06627 STKc_Cdc7_like Catalyt 100.0 8.7E-34 1.9E-38 289.3 23.0 242 409-704 6-250 (254)
341 cd05613 STKc_MSK1_N N-terminal 100.0 6.4E-34 1.4E-38 296.8 21.8 246 409-704 6-267 (290)
342 cd06634 STKc_TAO2 Catalytic do 100.0 5E-34 1.1E-38 300.3 21.0 240 409-705 21-267 (308)
343 cd07849 STKc_ERK1_2_like Catal 100.0 2.8E-34 6.1E-39 306.0 18.9 259 409-705 11-292 (336)
344 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-33 3.5E-38 297.1 24.3 239 409-704 27-272 (313)
345 KOG4645 MAPKKK (MAP kinase kin 100.0 5E-36 1.1E-40 336.3 5.3 248 408-704 1240-1493(1509)
346 PHA03210 serine/threonine kina 100.0 2.3E-34 5.1E-39 321.2 18.7 263 409-704 154-453 (501)
347 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-33 3.6E-38 293.0 23.6 258 409-704 5-283 (287)
348 cd06606 STKc_MAPKKK Catalytic 100.0 1.3E-33 2.9E-38 288.5 22.2 246 409-704 6-256 (260)
349 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-34 5.4E-39 321.3 17.6 266 398-704 479-870 (1351)
350 cd05118 STKc_CMGC Catalytic do 100.0 8.8E-34 1.9E-38 294.4 20.3 257 409-704 5-279 (283)
351 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.3E-33 4.9E-38 288.4 23.1 246 408-704 7-260 (264)
352 KOG0690 Serine/threonine prote 100.0 7.9E-35 1.7E-39 282.0 11.3 233 410-697 175-411 (516)
353 cd07855 STKc_ERK5 Catalytic do 100.0 5.1E-34 1.1E-38 303.8 18.5 258 409-704 11-293 (334)
354 cd07830 STKc_MAK_like Catalyti 100.0 7.7E-34 1.7E-38 295.0 19.3 257 409-704 5-279 (283)
355 cd08215 STKc_Nek Catalytic dom 100.0 3.2E-33 6.9E-38 285.6 23.4 246 409-704 6-254 (258)
356 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-33 2.8E-38 288.5 20.4 244 409-704 6-252 (256)
357 cd05123 STKc_AGC Catalytic dom 100.0 1.5E-33 3.3E-38 287.0 20.9 236 411-701 1-240 (250)
358 cd07864 STKc_CDK12 Catalytic d 100.0 1.9E-33 4.1E-38 295.0 22.0 258 409-704 13-298 (302)
359 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.5E-34 1.8E-38 302.4 19.6 260 409-710 11-298 (337)
360 cd07834 STKc_MAPK Catalytic do 100.0 2.2E-33 4.8E-38 298.5 21.3 265 409-710 6-296 (330)
361 cd07879 STKc_p38delta_MAPK13 C 100.0 1.8E-33 4E-38 300.4 20.5 254 409-710 21-304 (342)
362 cd07866 STKc_BUR1 Catalytic do 100.0 2.8E-33 6E-38 294.9 21.3 268 409-704 14-307 (311)
363 cd07852 STKc_MAPK15 Catalytic 100.0 2.8E-33 6.1E-38 298.5 21.3 261 409-705 13-295 (337)
364 cd07829 STKc_CDK_like Catalyti 100.0 2.7E-33 5.8E-38 290.6 19.9 257 409-704 5-278 (282)
365 cd05581 STKc_PDK1 Catalytic do 100.0 2.4E-33 5.2E-38 290.6 18.7 261 409-704 7-276 (280)
366 cd07857 STKc_MPK1 Catalytic do 100.0 4.6E-33 1E-37 296.1 21.2 260 409-704 6-291 (332)
367 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.4E-33 1.2E-37 296.8 20.8 248 409-703 21-296 (343)
368 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-32 2.4E-37 317.2 24.4 141 409-558 10-154 (669)
369 KOG0669 Cyclin T-dependent kin 100.0 4.4E-35 9.5E-40 274.8 3.5 260 410-704 24-314 (376)
370 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.4E-33 7.3E-38 298.4 18.4 258 409-704 11-299 (342)
371 cd08222 STKc_Nek11 Catalytic d 100.0 4.4E-33 9.6E-38 285.5 18.6 245 409-704 6-256 (260)
372 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-32 2.9E-37 291.8 22.7 253 409-705 16-288 (328)
373 cd05576 STKc_RPK118_like Catal 100.0 5.3E-33 1.2E-37 280.9 18.3 220 414-700 4-224 (237)
374 KOG0662 Cyclin-dependent kinas 100.0 4.6E-33 1E-37 248.4 15.6 257 410-704 9-282 (292)
375 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-32 3.2E-37 293.7 21.4 250 409-704 23-299 (345)
376 cd07851 STKc_p38 Catalytic dom 100.0 8E-33 1.7E-37 295.5 18.0 249 409-704 21-297 (343)
377 KOG1024 Receptor-like protein 100.0 7.3E-33 1.6E-37 274.8 15.4 257 409-711 290-557 (563)
378 KOG0696 Serine/threonine prote 100.0 1.5E-33 3.2E-38 280.9 10.5 234 409-697 355-593 (683)
379 KOG0612 Rho-associated, coiled 100.0 2.5E-33 5.4E-38 310.9 13.0 243 410-703 82-336 (1317)
380 KOG1151 Tousled-like protein k 100.0 1.4E-33 3E-38 283.2 9.8 255 409-703 469-739 (775)
381 KOG4236 Serine/threonine prote 100.0 1E-33 2.2E-38 289.7 7.3 253 398-703 558-817 (888)
382 KOG0671 LAMMER dual specificit 100.0 3E-33 6.6E-38 278.2 9.0 251 410-704 96-405 (415)
383 KOG0587 Traf2- and Nck-interac 100.0 4.9E-32 1.1E-36 294.2 18.0 245 409-704 25-281 (953)
384 KOG0603 Ribosomal protein S6 k 100.0 2E-32 4.3E-37 290.0 13.0 231 410-704 329-562 (612)
385 smart00220 S_TKc Serine/Threon 100.0 2.1E-31 4.6E-36 269.1 18.5 238 415-704 1-240 (244)
386 KOG0984 Mitogen-activated prot 100.0 3.5E-32 7.6E-37 248.4 10.6 208 399-642 44-258 (282)
387 KOG0695 Serine/threonine prote 100.0 6.2E-32 1.3E-36 262.8 12.6 239 409-697 256-502 (593)
388 PLN03224 probable serine/threo 100.0 1.2E-30 2.6E-35 285.3 20.5 255 408-704 150-499 (507)
389 KOG0614 cGMP-dependent protein 100.0 3E-32 6.5E-37 278.3 7.2 244 399-698 418-665 (732)
390 PLN03225 Serine/threonine-prot 100.0 6.8E-31 1.5E-35 294.8 18.6 257 408-704 137-449 (566)
391 PLN00113 leucine-rich repeat r 100.0 1.7E-30 3.7E-35 315.0 19.8 228 20-253 26-255 (968)
392 KOG0608 Warts/lats-like serine 100.0 5E-31 1.1E-35 275.3 12.5 223 409-640 635-875 (1034)
393 KOG1027 Serine/threonine prote 100.0 3.2E-31 6.9E-36 286.7 9.1 245 408-704 514-766 (903)
394 KOG0668 Casein kinase II, alph 100.0 1.8E-30 4E-35 240.6 12.1 251 410-704 45-321 (338)
395 KOG0664 Nemo-like MAPK-related 100.0 6.6E-31 1.4E-35 249.2 2.7 192 409-637 59-259 (449)
396 KOG0665 Jun-N-terminal kinase 100.0 4.7E-29 1E-33 242.8 11.6 249 410-704 24-309 (369)
397 cd00180 PKc Catalytic domain o 100.0 6.7E-28 1.5E-32 237.5 20.2 210 411-705 1-214 (215)
398 KOG1152 Signal transduction se 100.0 1.7E-29 3.6E-34 262.2 8.4 190 409-637 567-770 (772)
399 KOG1290 Serine/threonine prote 100.0 2.2E-28 4.9E-33 249.7 16.4 126 409-542 84-222 (590)
400 KOG0670 U4/U6-associated splic 100.0 1.7E-29 3.7E-34 258.9 8.0 267 398-704 424-745 (752)
401 KOG0576 Mitogen-activated prot 100.0 1.9E-29 4.2E-34 266.0 6.5 245 410-704 22-270 (829)
402 KOG1345 Serine/threonine kinas 100.0 2.2E-28 4.8E-33 232.3 11.7 254 398-704 20-283 (378)
403 KOG1167 Serine/threonine prote 100.0 1.6E-28 3.5E-33 248.1 10.5 283 408-704 41-380 (418)
404 smart00221 STYKc Protein kinas 99.9 1.1E-26 2.3E-31 232.1 18.6 194 409-637 5-201 (225)
405 smart00750 KIND kinase non-cat 99.9 8.1E-26 1.8E-30 217.2 14.4 169 484-711 1-171 (176)
406 PLN00181 protein SPA1-RELATED; 99.9 2.1E-26 4.6E-31 271.7 12.5 223 454-704 27-264 (793)
407 KOG0195 Integrin-linked kinase 99.9 5.3E-26 1.1E-30 215.9 7.6 246 410-710 197-447 (448)
408 PRK09188 serine/threonine prot 99.9 3.7E-23 7.9E-28 217.2 14.4 133 409-560 24-164 (365)
409 KOG1164 Casein kinase (serine/ 99.9 4.3E-21 9.4E-26 202.4 20.4 265 409-712 24-300 (322)
410 COG0515 SPS1 Serine/threonine 99.9 1.2E-20 2.6E-25 199.3 22.9 262 409-705 6-275 (384)
411 KOG0590 Checkpoint kinase and 99.9 1.8E-22 3.8E-27 226.0 5.9 255 407-704 322-584 (601)
412 cd05147 RIO1_euk RIO kinase fa 99.9 1.3E-21 2.9E-26 189.1 10.8 139 409-559 3-168 (190)
413 KOG1023 Natriuretic peptide re 99.8 5.9E-21 1.3E-25 203.8 12.7 218 453-711 1-226 (484)
414 KOG0617 Ras suppressor protein 99.8 1.1E-22 2.4E-27 181.0 -2.9 166 83-255 28-194 (264)
415 PRK10359 lipopolysaccharide co 99.8 8.3E-21 1.8E-25 185.3 9.0 132 408-558 36-184 (232)
416 KOG1163 Casein kinase (serine/ 99.8 9.1E-20 2E-24 171.1 14.3 259 409-710 21-285 (341)
417 KOG1165 Casein kinase (serine/ 99.8 2.2E-19 4.7E-24 176.1 17.5 260 408-711 33-301 (449)
418 cd05145 RIO1_like RIO kinase f 99.8 6.4E-20 1.4E-24 178.1 13.0 139 409-559 3-168 (190)
419 PRK12274 serine/threonine prot 99.8 1.4E-19 2.9E-24 172.7 13.1 194 409-638 8-209 (218)
420 KOG0603 Ribosomal protein S6 k 99.8 8.8E-21 1.9E-25 201.9 3.4 225 410-699 1-232 (612)
421 KOG0617 Ras suppressor protein 99.8 1.2E-21 2.6E-26 174.4 -3.7 164 63-234 32-196 (264)
422 KOG1240 Protein kinase contain 99.8 1.7E-20 3.8E-25 208.7 4.2 252 408-709 28-295 (1431)
423 PRK10345 hypothetical protein; 99.8 3.8E-19 8.2E-24 173.4 12.6 136 408-557 7-159 (210)
424 KOG4194 Membrane glycoprotein 99.8 2.1E-20 4.6E-25 195.0 -0.3 205 69-275 250-457 (873)
425 KOG0444 Cytoskeletal regulator 99.8 2.2E-20 4.8E-25 195.8 -1.2 183 63-253 102-311 (1255)
426 PLN03150 hypothetical protein; 99.8 5.5E-18 1.2E-22 192.9 17.7 140 20-180 369-510 (623)
427 PF14531 Kinase-like: Kinase-l 99.8 6.1E-19 1.3E-23 177.4 7.4 230 408-696 17-288 (288)
428 smart00090 RIO RIO-like kinase 99.7 9.6E-18 2.1E-22 167.8 12.3 137 409-559 34-199 (237)
429 PRK14879 serine/threonine prot 99.7 1.6E-17 3.5E-22 164.5 13.6 134 409-557 2-143 (211)
430 KOG4158 BRPK/PTEN-induced prot 99.7 1.1E-17 2.5E-22 167.6 12.0 202 457-707 274-512 (598)
431 KOG1166 Mitotic checkpoint ser 99.7 3E-17 6.5E-22 187.2 14.1 242 408-710 703-954 (974)
432 KOG0444 Cytoskeletal regulator 99.7 4.9E-19 1.1E-23 185.8 -0.6 154 63-222 31-185 (1255)
433 TIGR03724 arch_bud32 Kae1-asso 99.7 4.6E-17 9.9E-22 159.7 12.1 131 410-558 1-139 (199)
434 KOG4194 Membrane glycoprotein 99.7 2.7E-18 5.8E-23 179.5 2.0 194 63-257 124-340 (873)
435 KOG4237 Extracellular matrix p 99.7 1.2E-18 2.6E-23 174.6 -1.2 217 57-275 49-364 (498)
436 cd05144 RIO2_C RIO kinase fami 99.7 1.1E-16 2.4E-21 156.7 12.5 133 408-559 20-176 (198)
437 PRK09605 bifunctional UGMP fam 99.7 1.1E-16 2.4E-21 180.5 13.7 132 408-558 338-477 (535)
438 KOG0472 Leucine-rich repeat pr 99.7 3.5E-19 7.5E-24 178.5 -6.5 191 67-268 94-308 (565)
439 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.1E-17 2.4E-22 175.1 3.1 179 473-702 330-509 (516)
440 KOG0606 Microtubule-associated 99.7 9.3E-17 2E-21 179.4 10.2 215 409-697 89-304 (1205)
441 KOG0472 Leucine-rich repeat pr 99.6 5.1E-18 1.1E-22 170.3 -6.1 174 65-248 138-311 (565)
442 PRK01723 3-deoxy-D-manno-octul 99.6 3.7E-15 8.1E-20 149.4 14.0 137 406-557 34-191 (239)
443 cd05120 APH_ChoK_like Aminogly 99.6 5.2E-15 1.1E-19 137.7 11.8 134 409-558 4-139 (155)
444 KOG0618 Serine/threonine phosp 99.6 8.1E-17 1.7E-21 177.3 -1.2 200 63-270 240-489 (1081)
445 cd05119 RIO RIO kinase family, 99.6 4.3E-15 9.2E-20 144.1 10.7 136 409-559 3-165 (187)
446 KOG0590 Checkpoint kinase and 99.6 2.4E-16 5.1E-21 176.9 -0.5 248 410-703 27-284 (601)
447 PRK15370 E3 ubiquitin-protein 99.5 2.9E-14 6.4E-19 163.1 12.3 141 63-223 177-317 (754)
448 PRK15387 E3 ubiquitin-protein 99.5 1.8E-14 4E-19 163.8 9.7 93 137-247 343-435 (788)
449 PRK15370 E3 ubiquitin-protein 99.5 2.8E-14 6E-19 163.4 10.1 162 64-248 199-360 (754)
450 KOG0532 Leucine-rich repeat (L 99.5 3.4E-16 7.4E-21 163.9 -5.2 178 65-253 76-253 (722)
451 PRK15387 E3 ubiquitin-protein 99.5 1.1E-13 2.4E-18 157.4 12.9 159 65-249 223-417 (788)
452 TIGR01982 UbiB 2-polyprenylphe 99.5 1E-13 2.2E-18 151.1 10.0 140 409-559 123-308 (437)
453 KOG0532 Leucine-rich repeat (L 99.5 1.8E-15 3.8E-20 158.6 -4.1 179 85-274 72-250 (722)
454 PLN03210 Resistant to P. syrin 99.4 7.3E-13 1.6E-17 161.9 14.8 182 64-254 611-822 (1153)
455 PLN03210 Resistant to P. syrin 99.4 7.4E-13 1.6E-17 161.9 14.2 182 56-247 627-859 (1153)
456 KOG1266 Protein kinase [Signal 99.4 2.7E-13 5.9E-18 133.5 6.6 207 451-704 119-330 (458)
457 KOG0618 Serine/threonine phosp 99.4 2.4E-14 5.3E-19 158.0 -3.1 172 65-245 288-487 (1081)
458 cd00116 LRR_RI Leucine-rich re 99.4 4.4E-14 9.5E-19 149.4 -2.4 186 63-249 80-293 (319)
459 KOG0601 Cyclin-dependent kinas 99.3 2.2E-12 4.7E-17 138.4 8.6 248 407-704 118-378 (524)
460 cd00116 LRR_RI Leucine-rich re 99.3 8.7E-14 1.9E-18 147.1 -3.0 180 66-247 53-263 (319)
461 PRK04750 ubiB putative ubiquin 99.3 4.7E-12 1E-16 139.5 9.8 142 409-560 125-316 (537)
462 cd05151 ChoK Choline Kinase (C 99.3 1.3E-11 2.9E-16 117.4 11.0 129 410-557 5-136 (170)
463 COG4886 Leucine-rich repeat (L 99.3 2.3E-12 5E-17 140.4 6.0 178 65-252 117-295 (394)
464 KOG4237 Extracellular matrix p 99.2 2E-13 4.4E-18 137.5 -5.1 184 63-248 90-360 (498)
465 cd05146 RIO3_euk RIO kinase fa 99.2 1.1E-10 2.4E-15 111.8 12.7 135 410-559 4-175 (197)
466 COG4886 Leucine-rich repeat (L 99.2 1.8E-11 3.8E-16 133.5 6.2 204 54-267 80-287 (394)
467 PLN03150 hypothetical protein; 99.2 2.4E-11 5.3E-16 138.7 7.1 94 113-207 419-512 (623)
468 cd05154 ACAD10_11_like Acyl-Co 99.2 2.2E-10 4.7E-15 114.2 12.1 141 410-557 5-206 (223)
469 KOG0606 Microtubule-associated 99.1 1.6E-11 3.5E-16 138.1 3.6 267 410-700 811-1084(1205)
470 KOG1243 Protein kinase [Genera 99.1 7.5E-10 1.6E-14 120.0 16.1 167 424-633 34-200 (690)
471 KOG0601 Cyclin-dependent kinas 99.1 5.7E-11 1.2E-15 127.6 5.0 240 410-709 272-518 (524)
472 COG3642 Mn2+-dependent serine/ 99.1 8.7E-10 1.9E-14 101.7 11.4 131 410-558 3-141 (204)
473 KOG1259 Nischarin, modulator o 99.1 2.1E-11 4.6E-16 118.7 -0.3 138 106-251 278-416 (490)
474 PRK15123 lipopolysaccharide co 99.0 4.7E-09 1E-13 106.5 14.4 150 400-557 19-194 (268)
475 PF14580 LRR_9: Leucine-rich r 99.0 1.1E-10 2.4E-15 109.6 2.2 109 84-198 15-126 (175)
476 PF01163 RIO1: RIO1 family; I 99.0 4.5E-09 9.7E-14 100.5 11.3 124 418-557 1-155 (188)
477 KOG3087 Serine/threonine prote 99.0 5.4E-09 1.2E-13 95.9 11.0 140 410-557 14-165 (229)
478 PF14580 LRR_9: Leucine-rich r 98.9 9.2E-10 2E-14 103.4 5.0 125 109-240 16-146 (175)
479 KOG1259 Nischarin, modulator o 98.9 1.7E-10 3.6E-15 112.5 -1.4 115 125-247 273-387 (490)
480 PF08263 LRRNT_2: Leucine rich 98.9 2.5E-09 5.5E-14 75.6 4.5 41 22-62 2-43 (43)
481 KOG3741 Poly(A) ribonuclease s 98.8 9.6E-08 2.1E-12 100.7 16.2 171 417-635 290-475 (655)
482 COG0478 RIO-like serine/threon 98.8 3.9E-08 8.5E-13 96.3 11.2 135 406-558 94-252 (304)
483 KOG3207 Beta-tubulin folding c 98.7 1.8E-09 4E-14 110.8 0.6 177 65-247 122-314 (505)
484 PF13855 LRR_8: Leucine rich r 98.7 7.6E-09 1.6E-13 79.8 3.2 58 114-171 3-60 (61)
485 COG4248 Uncharacterized protei 98.7 5E-07 1.1E-11 92.9 17.1 263 409-711 17-302 (637)
486 PF13855 LRR_8: Leucine rich r 98.7 8.3E-09 1.8E-13 79.6 3.3 61 88-148 1-61 (61)
487 COG0661 AarF Predicted unusual 98.7 7E-08 1.5E-12 106.0 9.2 150 399-559 120-316 (517)
488 KOG3207 Beta-tubulin folding c 98.7 6.6E-09 1.4E-13 106.8 1.1 161 85-248 118-285 (505)
489 PF06293 Kdo: Lipopolysacchari 98.6 3.6E-07 7.8E-12 89.7 11.4 106 444-558 56-171 (206)
490 PRK09902 hypothetical protein; 98.6 1.1E-06 2.3E-11 84.6 13.8 138 411-557 26-179 (216)
491 KOG4579 Leucine-rich repeat (L 98.5 7.5E-09 1.6E-13 89.9 -1.9 88 88-179 53-141 (177)
492 KOG0531 Protein phosphatase 1, 98.5 3.8E-08 8.3E-13 107.6 2.9 173 64-249 95-270 (414)
493 KOG2137 Protein kinase [Signal 98.4 1E-07 2.2E-12 104.2 2.6 158 512-703 106-263 (700)
494 KOG1859 Leucine-rich repeat pr 98.4 9.2E-09 2E-13 111.5 -5.5 169 69-247 92-292 (1096)
495 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 4.9E-06 1.1E-10 82.8 13.0 139 409-557 7-182 (226)
496 KOG4579 Leucine-rich repeat (L 98.3 6.4E-08 1.4E-12 84.2 -0.7 139 89-234 28-170 (177)
497 KOG0531 Protein phosphatase 1, 98.3 1.1E-07 2.3E-12 104.1 -0.0 127 87-222 71-198 (414)
498 KOG1859 Leucine-rich repeat pr 98.3 1.9E-08 4.1E-13 109.2 -6.5 128 65-198 165-292 (1096)
499 KOG1909 Ran GTPase-activating 98.2 1.2E-07 2.6E-12 95.2 -2.9 181 65-247 93-311 (382)
500 KOG1235 Predicted unusual prot 98.2 8.9E-06 1.9E-10 89.2 11.1 148 400-559 157-356 (538)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.3e-68 Score=643.84 Aligned_cols=548 Identities=28% Similarity=0.473 Sum_probs=370.3
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCC---------
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGK--------- 134 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~--------- 134 (714)
.+++.|++.+|++.+.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|++|.++|.+|..+..
T Consensus 380 ~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 459 (968)
T PLN00113 380 GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459 (968)
T ss_pred CCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEEC
Confidence 44555555555555555555555555555555555555555555555555555555555554444443333
Q ss_pred --------------CCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccccc
Q 005102 135 --------------LKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGS 200 (714)
Q Consensus 135 --------------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~ 200 (714)
+++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+|..+. .+++|+.|+|++|.++|.
T Consensus 460 ~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 538 (968)
T PLN00113 460 ARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELS-SCKKLVSLDLSHNQLSGQ 538 (968)
T ss_pred cCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHc-CccCCCEEECCCCccccc
Confidence 35666677777777777777777778888888888888887887774 578888888888888888
Q ss_pred CCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCCCCCCCCC
Q 005102 201 IPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGPPLKNPCS 280 (714)
Q Consensus 201 ~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 280 (714)
+|..+.++++|+ .|+|++|+++|.+|..+..+++|+.|++++|+++|.+|....+..+....+.||+.+|+.+....
T Consensus 539 ~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~-- 615 (968)
T PLN00113 539 IPASFSEMPVLS-QLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG-- 615 (968)
T ss_pred CChhHhCcccCC-EEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccC--
Confidence 888888888888 88888888888888888888888888888888888888877777777777888888886431100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcccEEEEeehhHHHHHHHHHHhheeeeeeecCCCCCCCcccc
Q 005102 281 SDVPGASSPASYPFLPNNYPPENGDDGGGKREKGRGLSKSAIVAIIVSDVIGICLVGLLFSYCYSRVCGFGEGKDENCYA 360 (714)
Q Consensus 281 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~~~iv~i~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (714)
.| | ... .. +......++++++++++.++++ ++++.++|++++...+.. ..
T Consensus 616 -----------~~--~-------c~~-----~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~ 665 (968)
T PLN00113 616 -----------LP--P-------CKR-----VR-KTPSWWFYITCTLGAFLVLALV--AFGFVFIRGRNNLELKRV--EN 665 (968)
T ss_pred -----------CC--C-------Ccc-----cc-ccceeeeehhHHHHHHHHHHHH--HHHHHHHHhhhccccccc--cc
Confidence 00 0 000 00 0001111111111211111111 112222222111111000 00
Q ss_pred CCCCCCccccccccCCCccccccccccccccCCCccccCHHHHHHhc--cccccccCceEEEEEEE-CCCcEEEEEEeCC
Q 005102 361 KGGKGRKECLCFRKDESETLSENVEQYDLVPLDTQVAFDLDELLKAS--AFVLGKSGIGIVYKVVL-EDGHTLAVRRLGE 437 (714)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~ 437 (714)
..+ . .... .........++++++.... .++||+|+||.||+|+. .++..||||++..
T Consensus 666 ~~~---------------~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~ 725 (968)
T PLN00113 666 EDG---------------T--WELQ---FFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEIND 725 (968)
T ss_pred ccc---------------c--cccc---ccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccC
Confidence 000 0 0000 0000011234455544432 35899999999999997 4689999999875
Q ss_pred CCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 005102 438 GGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKG 517 (714)
Q Consensus 438 ~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~g 517 (714)
.... ...|++++++++|||||+++|+|.+.+..++||||+++|+|.++++ .++|.++.+|+.|+|+|
T Consensus 726 ~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 726 VNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR---------NLSWERRRKIAIGIAKA 792 (968)
T ss_pred Cccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 4332 2356889999999999999999999999999999999999999994 37899999999999999
Q ss_pred HHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCC
Q 005102 518 LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSN 597 (714)
Q Consensus 518 L~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (714)
|+|||..+.++|+||||||+||+++.++.+++. ||.+..... .....
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--------------------------------~~~~~ 839 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--------------------------------DTKCF 839 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc--------------------------------CCCcc
Confidence 999996544799999999999999999888875 665432210 11124
Q ss_pred CCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCC-CcHH
Q 005102 598 LGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDA-DKEE 676 (714)
Q Consensus 598 gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~ 676 (714)
+|..|+|||++.+..++.++|||||||++|||+||+.||.........+.+|++...... ....++|+.+.... ...+
T Consensus 840 ~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 918 (968)
T PLN00113 840 ISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC-HLDMWIDPSIRGDVSVNQN 918 (968)
T ss_pred ccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc-chhheeCccccCCCCccHH
Confidence 578899999999999999999999999999999999999554444556777776554332 24556666654332 2345
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 677 EIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 677 ~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+..++.+++.+||+.||++||||+||+++|+++.+.
T Consensus 919 ~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 919 EIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 677889999999999999999999999999998764
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-54 Score=454.37 Aligned_cols=285 Identities=41% Similarity=0.702 Sum_probs=244.8
Q ss_pred CccccCHHHHHHhcc-----ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEE
Q 005102 394 TQVAFDLDELLKASA-----FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468 (714)
Q Consensus 394 ~~~~~~~~~l~~~~~-----~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 468 (714)
....|+++++.+||. ++||+|+||.||+|...+|..||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 456799999999983 689999999999999999999999988876543135699999999999999999999999
Q ss_pred EeCC-ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 469 WSVD-EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 469 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
.+.+ +.+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||+.++++||||||||+|||+|+++++
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 9998 499999999999999999987531 68999999999999999999999887789999999999999999999
Q ss_pred EEcccchhhhhhc-cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHH
Q 005102 548 HVSDFGLARLANI-AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626 (714)
Q Consensus 548 kl~DFGla~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl 626 (714)
||+|||+|+.... .. .......||.+|+|||++..+..+.|+|||||||+|
T Consensus 217 KlsDFGLa~~~~~~~~----------------------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvl 268 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDT----------------------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVL 268 (361)
T ss_pred EccCccCcccCCcccc----------------------------ceeeecCCCCccCChhhhccCCcCcccccccchHHH
Confidence 9999999975432 10 000000679999999999999999999999999999
Q ss_pred HHHHhCCCccccCC-CCcchhHHHHHHHHhhcCCcccccCCCCCC-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 627 LEMITGRTAVVQVG-SSEMDLVNWMQLCIEEKKPLADVLDPYLAP-DADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 627 ~elltG~~p~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+||+||+.|.+... ..+..++.|+...+... .+.+++||.+.. .....+++.++..++.+|++.+|.+||+|.||++
T Consensus 269 lElitgr~~~d~~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 269 LELITGRKAVDQSRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHhCCcccCCCCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 99999999886443 34455899998777776 589999999873 3333368888999999999999999999999999
Q ss_pred HHhhhhc
Q 005102 705 ALDRLIV 711 (714)
Q Consensus 705 ~L~~i~~ 711 (714)
+|+.+..
T Consensus 348 ~L~~~~~ 354 (361)
T KOG1187|consen 348 ELEGILS 354 (361)
T ss_pred HHHhhcc
Confidence 9977653
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-49 Score=389.74 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=216.7
Q ss_pred cCHHHHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCc-e
Q 005102 398 FDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE-K 474 (714)
Q Consensus 398 ~~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~ 474 (714)
++..|+.+ ...||+|..|+|||+.++ +++.+|+|.+... +....+++.+|++++++++||+||.+||.|+..+. .
T Consensus 76 i~~~dle~--~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 76 ISLSDLER--LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred cCHHHhhh--hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence 56667765 347999999999999987 4889999999654 44556789999999999999999999999999985 9
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
.++||||.+|+|.+++... +++++...-+|+.+|++||.|||+. ++||||||||+|||++..|++||||||.
T Consensus 154 sI~mEYMDgGSLd~~~k~~------g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRV------GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred EeehhhcCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccc
Confidence 9999999999999999765 4589999999999999999999953 7999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
++.+.. +...+.+||..|||||-+.+..|+.++||||||++++|+++|+.
T Consensus 226 S~~lvn------------------------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~Grf 275 (364)
T KOG0581|consen 226 SGILVN------------------------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRF 275 (364)
T ss_pred cHHhhh------------------------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCC
Confidence 987642 23456789999999999999999999999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
||........+..+.+.....+.. |.++.. ....++.+++..||++||.+|||++|+++
T Consensus 276 P~~~~~~~~~~~~~Ll~~Iv~~pp-------P~lP~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 276 PYPPPNPPYLDIFELLCAIVDEPP-------PRLPEG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCcCCCCCCHHHHHHHHhcCCC-------CCCCcc----cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 996554445566666665555432 222222 23346899999999999999999999875
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-48 Score=402.60 Aligned_cols=262 Identities=29% Similarity=0.456 Sum_probs=209.9
Q ss_pred ccCHHHHHHhccccccccCceEEEEEEECCCcEEEEEEeCCCCchh--HHHHHHHHHHHhccCCCCccceEEEEEeCC-c
Q 005102 397 AFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR--FKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-E 473 (714)
Q Consensus 397 ~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~ 473 (714)
.++.+++.. .+.||+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.... .
T Consensus 37 ~i~~~~l~~--~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 37 EIDPDELPI--EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred ecChHHhhh--hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 344455443 33599999999999999754449999998753322 568999999999999999999999999887 7
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceecCCCCCCeeeCCCC-CeEEcc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK-YVHGDLKPSNILLGHNM-EPHVSD 551 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-ivHrDlkp~NILl~~~~-~~kl~D 551 (714)
.++|||||++|+|.++++.... ..+++..+++|+.|||+||.|||+ .+ ||||||||+|||++.++ ++||+|
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~~----~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKRK----RKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECC
Confidence 8999999999999999987411 569999999999999999999999 67 99999999999999998 999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC--CCCCCchhhhHHHHHHHHHH
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK--VVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~~~DVwS~Gvvl~el 629 (714)
||+++...... ...+...||..|||||++. ...|+.|+|||||||++|||
T Consensus 188 FGlsr~~~~~~----------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl 239 (362)
T KOG0192|consen 188 FGLSREKVISK----------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWEL 239 (362)
T ss_pred Cccceeecccc----------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHH
Confidence 99998653210 1223357899999999999 56899999999999999999
Q ss_pred HhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 630 ITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 630 ltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
+||+.||..... ...+........ .|.++.. +...+..++.+||+.||++||++.+++..|+.+
T Consensus 240 ~t~~~Pf~~~~~-----~~~~~~v~~~~~------Rp~~p~~-----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 240 LTGEIPFEDLAP-----VQVASAVVVGGL------RPPIPKE-----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHCCCCCCCCCH-----HHHHHHHHhcCC------CCCCCcc-----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 999999954322 222222222221 1212111 334688999999999999999999999999988
Q ss_pred hc
Q 005102 710 IV 711 (714)
Q Consensus 710 ~~ 711 (714)
..
T Consensus 304 ~~ 305 (362)
T KOG0192|consen 304 MS 305 (362)
T ss_pred HH
Confidence 65
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=396.95 Aligned_cols=265 Identities=28% Similarity=0.443 Sum_probs=214.1
Q ss_pred ccccCHHHHHHhccccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCce
Q 005102 395 QVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK 474 (714)
Q Consensus 395 ~~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (714)
.+.++.+++.. .+.||+|.||+||.|.+.....||+|.++.... ..+.|.+|+++|++++|+|||+++|+|...+..
T Consensus 200 ~wei~r~~l~l--~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi 276 (468)
T KOG0197|consen 200 PWEIPREELKL--IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI 276 (468)
T ss_pred CeeecHHHHHH--HHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence 34555555544 457999999999999998777999999987633 347899999999999999999999999998899
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
|||||||+.|+|.++|....+ ..+...+.+.++.|||+|++||++ +++|||||.++|||++++..+||+|||+
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGL 349 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGL 349 (468)
T ss_pred EEEEEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEccccc
Confidence 999999999999999987433 568889999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GR 633 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~ 633 (714)
||...++.. .. .....-...|.|||.+..++++.|||||||||+||||+| |+
T Consensus 350 Ar~~~d~~Y-~~--------------------------~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~ 402 (468)
T KOG0197|consen 350 ARLIGDDEY-TA--------------------------SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR 402 (468)
T ss_pred ccccCCCce-ee--------------------------cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC
Confidence 995443221 11 111111345999999999999999999999999999999 89
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
.||.... ..+.+.. +..+..+ -.|. .++..++++|..||+.+|++|||++.+...|+++...+
T Consensus 403 ~py~~ms-----n~ev~~~-le~GyRl---p~P~--------~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 403 VPYPGMS-----NEEVLEL-LERGYRL---PRPE--------GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred CCCCCCC-----HHHHHHH-HhccCcC---CCCC--------CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 8984332 2222322 2222221 1222 24457999999999999999999999999999987654
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-46 Score=392.90 Aligned_cols=242 Identities=23% Similarity=0.378 Sum_probs=206.3
Q ss_pred cccccccCceEEEEEEE-CCCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVL-EDGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+++||+|||++||+++. ..|..||+|++.+. .....+...+||++.+.++|||||+++++|++.+..|+|.|+|++
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~ 102 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHR 102 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCC
Confidence 56899999999999998 77999999999874 334457789999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|..+++.+ ..+++.+++.+++||+.||.|||+ .+|+|||||..|+++++++++||+|||+|..+..++
T Consensus 103 ~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~- 172 (592)
T KOG0575|consen 103 GSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG- 172 (592)
T ss_pred ccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCcc-
Confidence 9999999854 579999999999999999999999 899999999999999999999999999998775331
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
....+.+|||.|+|||++.....+..+||||+|||||.|++|++||..
T Consensus 173 ---------------------------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet----- 220 (592)
T KOG0575|consen 173 ---------------------------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET----- 220 (592)
T ss_pred ---------------------------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-----
Confidence 234467899999999999988999999999999999999999999932
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+.+-..........++. ....+..++|.++|+.||.+|||+++|+.
T Consensus 221 k~vkety~~Ik~~~Y~~P~-------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 221 KTVKETYNKIKLNEYSMPS-------------HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred chHHHHHHHHHhcCccccc-------------ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2333333333333322221 12235779999999999999999999975
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-46 Score=374.52 Aligned_cols=191 Identities=26% Similarity=0.439 Sum_probs=172.8
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.||+|+||+||+|+++. +..||||.+.+. .....+....|+.+|+.++|||||+++++++..+..|+|||||.+|||
T Consensus 17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDL 96 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDL 96 (429)
T ss_pred hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCH
Confidence 49999999999999864 899999999876 445556788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC------CCeEEcccchhhhhhc
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN------MEPHVSDFGLARLANI 560 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla~~~~~ 560 (714)
.++++.. ..+++..++.++.|+|.||++||+ ++||||||||+||||+.. -.+||+|||+|+.+..
T Consensus 97 s~yi~~~------~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~ 167 (429)
T KOG0595|consen 97 SDYIRRR------GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP 167 (429)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence 9999877 469999999999999999999999 999999999999999764 4589999999998763
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
. ....+..|++.|||||++..++|+.|+|+||+|+|+|||++|+.||..
T Consensus 168 ~-----------------------------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 168 G-----------------------------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred h-----------------------------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 2 233456789999999999999999999999999999999999999953
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-45 Score=400.81 Aligned_cols=259 Identities=26% Similarity=0.441 Sum_probs=211.6
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|.||+||+|+.. +...||||.++..... ..++|++|+++++.++|||||+++|.|..++..++|+|||
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm 571 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYM 571 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEec
Confidence 46999999999999853 3568999999987655 6789999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCC--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 482 PNGSLATALHGKPGMVS--------FTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
..|||.++|........ ..+|+..+.+.||.|||.|++||-+ +.+|||||..+|+||.++..+||+|||
T Consensus 572 ~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIsDfG 648 (774)
T KOG1026|consen 572 DHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKISDFG 648 (774)
T ss_pred ccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEecccc
Confidence 99999999975432211 2348899999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-C
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G 632 (714)
++|.....+.+......- -...|||||.+..++||++||||||||+|||++| |
T Consensus 649 LsRdiYssDYYk~~~~t~--------------------------lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG 702 (774)
T KOG1026|consen 649 LSRDIYSSDYYKVRGNTL--------------------------LPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYG 702 (774)
T ss_pred cchhhhhhhhhcccCCce--------------------------eeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccc
Confidence 999765433221110000 1345999999999999999999999999999999 9
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+.||+...+++ .++ +++.+..+ ..++.++.++++||..||+.+|++||+++||-.+|++....
T Consensus 703 ~QPy~glSn~E--VIe----~i~~g~lL-----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 703 KQPYYGLSNQE--VIE----CIRAGQLL-----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred cCcccccchHH--HHH----HHHcCCcc-----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 99996654433 222 23333211 11233556899999999999999999999999999987655
Q ss_pred C
Q 005102 713 S 713 (714)
Q Consensus 713 ~ 713 (714)
+
T Consensus 766 s 766 (774)
T KOG1026|consen 766 S 766 (774)
T ss_pred C
Confidence 4
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-46 Score=370.56 Aligned_cols=246 Identities=22% Similarity=0.367 Sum_probs=197.4
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.|-+|..+ +|+.||||++.+... ......++|+++|++++|||||+++++|...+..|||||
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE 256 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLE 256 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEE
Confidence 468999999999999864 699999999986421 122346799999999999999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC---CCeEEcccchhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVSDFGLAR 556 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~ 556 (714)
||++|+|.+.+-.+ ..+.+..-+.+++|++.|+.|||+ +||+||||||+|||+..+ ..+||+|||+|+
T Consensus 257 ~v~GGeLfd~vv~n------k~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 257 YVEGGELFDKVVAN------KYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred EecCccHHHHHHhc------cccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999876 446777789999999999999999 999999999999999765 789999999999
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC---CchhhhHHHHHHHHHHHhCC
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP---SQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~~~DVwS~Gvvl~elltG~ 633 (714)
.... .....+.+||+.|.|||++.+..+ ..++|+||+||+||-+++|.
T Consensus 328 ~~g~-----------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~ 378 (475)
T KOG0615|consen 328 VSGE-----------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY 378 (475)
T ss_pred cccc-----------------------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC
Confidence 7642 223456789999999999976543 34889999999999999999
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+||.+...+. .+.+. .......+ ......+..++..++|.+||..||++|||+.|+++
T Consensus 379 pPFS~~~~~~-sl~eQ---I~~G~y~f---------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 379 PPFSEEYTDP-SLKEQ---ILKGRYAF---------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred CCcccccCCc-cHHHH---HhcCcccc---------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 9995433221 12221 11221111 11222345667899999999999999999999875
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-45 Score=351.05 Aligned_cols=252 Identities=25% Similarity=0.362 Sum_probs=200.9
Q ss_pred cccccCceEEEEEE-ECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEE-EEeCCc-eeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVV-LEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAY-YWSVDE-KLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~-~~~~~~-~~lV~e~~~~g 484 (714)
.||+|.||+|||+. ..+|..||.|.+.-+ +....++...|+.+|++++|||||++++. +.+..+ .++||||+..|
T Consensus 26 ~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~G 105 (375)
T KOG0591|consen 26 KIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAG 105 (375)
T ss_pred HHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhccc
Confidence 79999999999998 467999999998743 45556789999999999999999999984 334444 79999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK-YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
||.++++.-+.. .+.+++..+++++.|+++||.++|...+++ |+||||||.||+++.+|.+||+|||+++++...
T Consensus 106 DLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~-- 181 (375)
T KOG0591|consen 106 DLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK-- 181 (375)
T ss_pred CHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcch--
Confidence 999998643221 156999999999999999999999965543 889999999999999999999999999988532
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
++...+.+|||+||+||.+.+.+|+.|+||||+||++|||..-++||...
T Consensus 182 --------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---- 231 (375)
T KOG0591|consen 182 --------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---- 231 (375)
T ss_pred --------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc----
Confidence 34456778999999999999999999999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.+.+.-+.+..... |.+ +.+.....+.+++..|+..||+.||+...++..++
T Consensus 232 -n~~~L~~KI~qgd~-------~~~----p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 232 -NLLSLCKKIEQGDY-------PPL----PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -cHHHHHHHHHcCCC-------CCC----cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 22222221111111 111 12334557889999999999999998655554444
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=360.49 Aligned_cols=235 Identities=26% Similarity=0.352 Sum_probs=198.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
++||+|+||+||.++.++ ++.+|+|++++.. ....+....|..+|.+++||.||+++..|++.++.|+|+||+.||
T Consensus 31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GG 110 (357)
T KOG0598|consen 31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGG 110 (357)
T ss_pred eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCc
Confidence 489999999999999765 8999999998752 334567889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|..+|++. ..+++..++-++.+|+.||.|||+ .+||||||||+|||+|++|+++|+|||+++..-..
T Consensus 111 eLf~hL~~e------g~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~--- 178 (357)
T KOG0598|consen 111 ELFYHLQRE------GRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD--- 178 (357)
T ss_pred cHHHHHHhc------CCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcccC---
Confidence 999999866 468999999999999999999999 99999999999999999999999999999854221
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
...+.+.+||+.|||||++.+..|+..+|.||+||++|||++|.+||.. .
T Consensus 179 -------------------------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-----~ 228 (357)
T KOG0598|consen 179 -------------------------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-----E 228 (357)
T ss_pred -------------------------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-----c
Confidence 2334457899999999999999999999999999999999999999943 3
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
+..++.....+.+.... +.. ...+..+++.+.+..||++|.
T Consensus 229 ~~~~~~~~I~~~k~~~~---p~~---------ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 229 DVKKMYDKILKGKLPLP---PGY---------LSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred cHHHHHHHHhcCcCCCC---Ccc---------CCHHHHHHHHHHhccCHHHhc
Confidence 34445555544441110 010 112577899999999999995
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.3e-44 Score=345.89 Aligned_cols=256 Identities=22% Similarity=0.383 Sum_probs=198.5
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+|+|+||.|||++.++ |+.||||++..... .-.+-..+|++.|++++|+|+|.++++|......++|+||++. ++
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-Tv 87 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TV 87 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HH
Confidence 69999999999999876 99999999987533 3345688999999999999999999999999999999999977 55
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+-|...+ ..++...+++|+.|+++|+.|+|+ +++|||||||+||||+.++.+||||||+|+.+...+
T Consensus 88 L~eLe~~p-----~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---- 155 (396)
T KOG0593|consen 88 LHELERYP-----NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---- 155 (396)
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCc----
Confidence 55555443 458889999999999999999999 899999999999999999999999999999875321
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
..-+..+.|++|+|||.+.+ .+|+..+||||+||++.||+||.+.|+ +..+.|
T Consensus 156 ------------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~P--G~SDiD 209 (396)
T KOG0593|consen 156 ------------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWP--GRSDID 209 (396)
T ss_pred ------------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCC--CcchHH
Confidence 12234456999999999987 679999999999999999999998884 334444
Q ss_pred hHHHHHHHH-----------hhcCCcccccCCCCCCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCI-----------EEKKPLADVLDPYLAPDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..-.++..+ ....-+..+.-|......+. .....-+++++..|++.||++|++-+|++.
T Consensus 210 QLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 210 QLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 333332222 11111111111111111110 122335789999999999999999998863
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-43 Score=357.80 Aligned_cols=257 Identities=24% Similarity=0.372 Sum_probs=197.6
Q ss_pred cccccCceEEEEEEE-CCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|+. .+|+.||+|+++... ........+||.||++++||||+++.+...+. ...|||+|||++
T Consensus 124 kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh- 202 (560)
T KOG0600|consen 124 KIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH- 202 (560)
T ss_pred HhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-
Confidence 599999999999995 569999999998654 33445678999999999999999999998876 689999999987
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
||.-++.... -.++..+++.|++|++.||+|+|+ ++|+|||||.+|||||.+|.+||+|||+|+++.....
T Consensus 203 DL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~- 273 (560)
T KOG0600|consen 203 DLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS- 273 (560)
T ss_pred hhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCCC-
Confidence 9998887543 469999999999999999999999 9999999999999999999999999999998764321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
...+..+-|.+|+|||.+.|. .|++++|+||.||||.||++|++.|. +..+
T Consensus 274 --------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~--G~tE 325 (560)
T KOG0600|consen 274 --------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ--GRTE 325 (560)
T ss_pred --------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC--CccH
Confidence 113344558999999999885 59999999999999999999998883 3333
Q ss_pred chhHH-HHHHHHh---hcCC---cc--cccCCCCCCCCCcH----HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVN-WMQLCIE---EKKP---LA--DVLDPYLAPDADKE----EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~-~~~~~~~---~~~~---~~--~~~d~~~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+... .++.|-. +.++ +. ..+.+...-..... .-....++|+..+|..||++|.|+.++++
T Consensus 326 veQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 326 VEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred HHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 33222 2221110 0111 00 11111110000001 11235688999999999999999998874
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-43 Score=362.84 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=205.8
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
++.||+|+|++||+|+.. +++.+|||++.+. .+...+...+|-++|.+| .||.|++++-.|.+...+|+|+||++
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 458999999999999965 4899999999774 333446788899999999 89999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.++|+.. ..+++...+.++.+|+.||+|||+ +|||||||||+|||+|+||++||+|||.|+.+....
T Consensus 158 nGdll~~i~K~------Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 158 NGDLLDLIKKY------GSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred CCcHHHHHHHh------CcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 99999999876 568999999999999999999999 999999999999999999999999999999987543
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.....+... ........+++||..|.+||++.+...++.+|+|+||||+|+|+.|++||... +
T Consensus 229 ~~~~~~~~~---------------~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~--N 291 (604)
T KOG0592|consen 229 KSQENPVDP---------------NQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA--N 291 (604)
T ss_pred ccccCccCc---------------ccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc--c
Confidence 322111000 00122236789999999999999999999999999999999999999999432 1
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+ ....+.++.-...+ .+.+. ..+.+|+.+.|..||.+|+|.++|.+
T Consensus 292 e---yliFqkI~~l~y~f--------p~~fp-----~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 292 E---YLIFQKIQALDYEF--------PEGFP-----EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred H---HHHHHHHHHhcccC--------CCCCC-----HHHHHHHHHHHccCccccccHHHHhh
Confidence 1 12233333332222 22222 25779999999999999999987754
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=353.09 Aligned_cols=250 Identities=28% Similarity=0.428 Sum_probs=198.1
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC--ceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--EKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~~~~g 484 (714)
.+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+.+|.....+ ..++.|||+++|
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G 101 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG 101 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence 4689999999999999865 8999999998764444677899999999999999999999866555 588999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhhhhccCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~ 563 (714)
+|.+++....+ .+++..++++..||++||+|||+ ++||||||||+|||++. ++.+||+|||+++.......
T Consensus 102 sL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 102 SLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred cHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 99999987642 58999999999999999999999 99999999999999999 79999999999986542000
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.........||+.|||||++..+ ....++||||+||++.||+||+.||...
T Consensus 174 -------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--- 225 (313)
T KOG0198|consen 174 -------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--- 225 (313)
T ss_pred -------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh---
Confidence 01123346789999999999853 3445999999999999999999999542
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
.+...++-...... ..|.++.. ......+++.+|++.||++||||+++++.
T Consensus 226 -~~~~~~~~~ig~~~------~~P~ip~~-----ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 226 -FEEAEALLLIGRED------SLPEIPDS-----LSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred -cchHHHHHHHhccC------CCCCCCcc-----cCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 12222222222222 11222222 22357789999999999999999999864
No 16
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-42 Score=354.34 Aligned_cols=261 Identities=18% Similarity=0.278 Sum_probs=208.1
Q ss_pred CccccCHHHHHHhccccccccCceEEEEEEECCCcEEEEEEeCCCCchh---HHHHHHHHHHHhccCCCCccceEEEEEe
Q 005102 394 TQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR---FKEFQTEVEAIGKIRHSNIVTLRAYYWS 470 (714)
Q Consensus 394 ~~~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (714)
..+.++.+++.......||+|+++.||+|.+ +|+.||||+++...... .+.|.+|+++|++++||||++++|++.+
T Consensus 11 ~~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~ 89 (283)
T PHA02988 11 DIKCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIID 89 (283)
T ss_pred cceecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEe
Confidence 3445677777666667899999999999999 68999999998653322 4678899999999999999999999877
Q ss_pred ----CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC
Q 005102 471 ----VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546 (714)
Q Consensus 471 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~ 546 (714)
....++||||+++|+|.+++... ..+++..+.+++.|++.||.|||+. .+++||||||+||++++++.
T Consensus 90 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 90 IVDDLPRLSLILEYCTRGYLREVLDKE------KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred cccCCCceEEEEEeCCCCcHHHHHhhC------CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCc
Confidence 34678999999999999999765 4588999999999999999999972 37889999999999999999
Q ss_pred eEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHH
Q 005102 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGV 624 (714)
Q Consensus 547 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gv 624 (714)
+||+|||+++..... .....|+..|+|||++.+ ..++.++|||||||
T Consensus 162 ~kl~dfg~~~~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGv 210 (283)
T PHA02988 162 LKIICHGLEKILSSP-------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGV 210 (283)
T ss_pred EEEcccchHhhhccc-------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHH
Confidence 999999999864311 112235778999999976 67999999999999
Q ss_pred HHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 625 ILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 625 vl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
++|||++|+.||.... ..+........... +.... .....+.+++.+||+.||++|||++|+++
T Consensus 211 il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~------~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 211 VLWEIFTGKIPFENLT-----TKEIYDLIINKNNS------LKLPL-----DCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHCCCCCCCCC-----HHHHHHHHHhcCCC------CCCCC-----cCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 9999999999995321 12222222222211 11111 12336889999999999999999999999
Q ss_pred HHhhhh
Q 005102 705 ALDRLI 710 (714)
Q Consensus 705 ~L~~i~ 710 (714)
.|+.+.
T Consensus 275 ~l~~~~ 280 (283)
T PHA02988 275 NLSLYK 280 (283)
T ss_pred HHHHHH
Confidence 999875
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=356.70 Aligned_cols=256 Identities=24% Similarity=0.318 Sum_probs=197.1
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhH-HHHHHHHHHHhccC-CCCccceEEEEEeCC-ceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRF-KEFQTEVEAIGKIR-HSNIVTLRAYYWSVD-EKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~lV~e~~~~g 484 (714)
+.||.|+||.||+|+- .+|..||||++++.-.... -.=.||+..|++++ |||||++.+.+.+.+ ..++|||||+.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~- 94 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC- 94 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-
Confidence 3699999999999995 4589999999987533321 12368999999998 999999999999988 89999999965
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|++++++++ ..+++..++.|+.||++||+|+|. +|+.|||+||+|||+.....+||+|||+||.+....
T Consensus 95 NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp-- 164 (538)
T KOG0661|consen 95 NLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP-- 164 (538)
T ss_pred hHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccccCC--
Confidence 9999998874 579999999999999999999999 999999999999999988899999999999764321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
..+..+.|++|+|||++. .+.|+.+.||||+|||++|+.+-++.|. +..+
T Consensus 165 ---------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP--G~sE 215 (538)
T KOG0661|consen 165 ---------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP--GASE 215 (538)
T ss_pred ---------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC--CCcH
Confidence 223345699999999985 4668999999999999999999999884 3333
Q ss_pred chhHHHHHHHHhhc--------CCcccccCCCC---CCCCC---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEK--------KPLADVLDPYL---APDAD---KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~--------~~~~~~~d~~~---~~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.|..--+...+... ..+...+.-.+ .+..- ......++.+++.+|+.+||++|||++|+++
T Consensus 216 ~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 216 IDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 33222121111110 00111111111 11000 0124557889999999999999999999876
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=362.52 Aligned_cols=264 Identities=26% Similarity=0.422 Sum_probs=209.6
Q ss_pred CccccCHHHHHHhccccccccCceEEEEEEECCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC
Q 005102 394 TQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV 471 (714)
Q Consensus 394 ~~~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 471 (714)
..+.+.++|+.. .+.||+|+||+||+|+|. -.||||++.... ....+.|++|+.++++-||.||+-+.|||...
T Consensus 385 ~~WeIp~~ev~l--~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLL--GERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhc--cceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 345666777665 468999999999999996 379999998753 34567899999999999999999999999887
Q ss_pred CceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcc
Q 005102 472 DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551 (714)
Q Consensus 472 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 551 (714)
+. .+|+.+|++-+|+.++|..+ .+++..+.+.||.|||+|+.|||. ++|||||||..||+++++++|||+|
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgD 531 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGD 531 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEec
Confidence 77 99999999999999999775 569999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---CCCCchhhhHHHHHHHHH
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---VKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DVwS~Gvvl~e 628 (714)
||++..-....+ ........|...|||||+++. .+|++.+||||||+|+||
T Consensus 532 FGLatvk~~w~g--------------------------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YE 585 (678)
T KOG0193|consen 532 FGLATVKTRWSG--------------------------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYE 585 (678)
T ss_pred ccceeeeeeecc--------------------------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHH
Confidence 999864321110 111122335667999999963 468999999999999999
Q ss_pred HHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCC--CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 629 MITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDA--DKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 629 lltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
|+||..||. ....+. .-|+ +-..++.++. ....+.+++.+|+..||..++++||.+.+|+..|
T Consensus 586 Lltg~lPys-i~~~dq--Iifm------------VGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l 650 (678)
T KOG0193|consen 586 LLTGELPYS-IQNRDQ--IIFM------------VGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKL 650 (678)
T ss_pred HHhCcCCcC-CCChhh--eEEE------------ecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHH
Confidence 999999995 222111 1111 1111111111 1124556788999999999999999999999999
Q ss_pred hhhhc
Q 005102 707 DRLIV 711 (714)
Q Consensus 707 ~~i~~ 711 (714)
+++..
T Consensus 651 ~~l~~ 655 (678)
T KOG0193|consen 651 EELLP 655 (678)
T ss_pred HHhhh
Confidence 98765
No 19
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=377.97 Aligned_cols=255 Identities=28% Similarity=0.474 Sum_probs=212.0
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.++||.|.||+||+|+++- ...||||.++.+.. ..+.+|..|+.||.+++||||+++.|+.......++|.|||+
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME 713 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME 713 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence 5789999999999999863 46899999998744 445689999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|..+|+.+.+ ++++.+..-+.++||.|++||-+ .++|||||.++|||++.+..+|++|||++|.+.++.
T Consensus 714 NGsLDsFLR~~DG-----qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 714 NGSLDSFLRQNDG-----QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred CCcHHHHHhhcCC-----ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 9999999998864 48999999999999999999999 899999999999999999999999999999875432
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. ..++....-...|.|||.+...++|.++|||||||||||.++ |.+||.+..+
T Consensus 786 ~~-------------------------~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN 840 (996)
T KOG0196|consen 786 EA-------------------------AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 840 (996)
T ss_pred Cc-------------------------cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch
Confidence 10 000011111346999999999999999999999999999887 9999977655
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.+. ...++++..++ + +.+++..+.+||..||++|-.+||++.||+..|.++++.
T Consensus 841 QdV------IkaIe~gyRLP--------p---PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 841 QDV------IKAIEQGYRLP--------P---PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred HHH------HHHHHhccCCC--------C---CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 432 22233333221 1 123566899999999999999999999999999998765
No 20
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=358.44 Aligned_cols=248 Identities=29% Similarity=0.388 Sum_probs=202.6
Q ss_pred cccCHHHHHHhccccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCcee
Q 005102 396 VAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKL 475 (714)
Q Consensus 396 ~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (714)
+.+.++++.+ -+.||.|+.|.||+|+++ ++.||||+++... ..+|+-|++|+||||+.+.|+|.....+|
T Consensus 119 WeiPFe~IsE--LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyC 188 (904)
T KOG4721|consen 119 WEIPFEEISE--LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYC 188 (904)
T ss_pred ccCCHHHhhh--hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeE
Confidence 3445555544 246999999999999996 7899999987533 35788899999999999999999999999
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
||||||+.|-|+..|+.. +.++....+.|..+||.|+.|||. +.|||||||+-||||..+..+||+|||-+
T Consensus 189 IiMEfCa~GqL~~VLka~------~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 189 IIMEFCAQGQLYEVLKAG------RPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred EeeeccccccHHHHHhcc------CccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccch
Confidence 999999999999999876 568889999999999999999999 89999999999999999999999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
+.... ..+...+.||..|||||++...++++|+||||||||||||+||..|
T Consensus 260 ~e~~~-----------------------------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiP 310 (904)
T KOG4721|consen 260 KELSD-----------------------------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIP 310 (904)
T ss_pred Hhhhh-----------------------------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCC
Confidence 86643 1234567789999999999999999999999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
|.+...... ++.-+..... .+-+..+.+.+.-|+++||+..|..||++++++.-|+
T Consensus 311 YkdVdssAI--------IwGVGsNsL~--------LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 311 YKDVDSSAI--------IWGVGSNSLH--------LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccccchhee--------EEeccCCccc--------ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 954322111 0001111111 1111234456778999999999999999999998876
No 21
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.6e-42 Score=323.11 Aligned_cols=258 Identities=22% Similarity=0.349 Sum_probs=198.8
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchh--HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQR--FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+++|+|.||.||+|++ ++|+.||||+++.....+ .....+||+.|+.++|+||+.++++|-..+..-+|+|||+. |
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-d 86 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-D 86 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-c
Confidence 4799999999999996 469999999998764331 24678999999999999999999999999999999999976 9
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|+..+++.. ..++..+++.++.++++||+|+|+ +.|+||||||.|+|++++|.+||+|||+|+.+.....
T Consensus 87 Le~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 87 LEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred HHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999998765 568999999999999999999999 9999999999999999999999999999998754321
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.....+-|++|+|||.+.|.+ |+..+||||.|||+.||+-|.+-|. +..+.
T Consensus 157 --------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp--G~sDi 208 (318)
T KOG0659|consen 157 --------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP--GDSDI 208 (318)
T ss_pred --------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC--CCchH
Confidence 111224589999999998764 8999999999999999998876552 33333
Q ss_pred hhHHHHHHHHhhc----C----CcccccCCCCCCCC----CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEK----K----PLADVLDPYLAPDA----DKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~----~----~~~~~~d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
+....+-..+... + .+.+.+.-...+.. -........++++..++..||.+|+|++|+++.
T Consensus 209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 3333222222111 1 01111110000000 011233456899999999999999999998763
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=361.40 Aligned_cols=242 Identities=23% Similarity=0.358 Sum_probs=204.2
Q ss_pred cccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|..|.||.+.. .+++.||||++........+-..+|+.+|+..+|+|||.+++.|...++.++|||||++|+|.+
T Consensus 280 kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTD 359 (550)
T KOG0578|consen 280 KIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTD 359 (550)
T ss_pred hhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhh
Confidence 699999999999985 4589999999988777776778999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
.+... .+++.++..|++++++||+|||. ++|+|||||.+|||++.++.+||+|||++..+...
T Consensus 360 vVt~~-------~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~------- 422 (550)
T KOG0578|consen 360 VVTKT-------RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE------- 422 (550)
T ss_pred hhhcc-------cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccc-------
Confidence 98654 48999999999999999999999 99999999999999999999999999999876532
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVN 648 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~ 648 (714)
.....+.+||++|||||+.....|++|+||||||++++||+-|.+||... ..+.
T Consensus 423 ---------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~Plr- 476 (550)
T KOG0578|consen 423 ---------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLR- 476 (550)
T ss_pred ---------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHH-
Confidence 22445678999999999999999999999999999999999999999531 1121
Q ss_pred HHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 649 WMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 649 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+......+. |.+.. .+.....+.+|+.+||..|+++||++.|+++
T Consensus 477 AlyLIa~ng~-------P~lk~---~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 477 ALYLIATNGT-------PKLKN---PEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHhhcCC-------CCcCC---ccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 1222222221 22211 1233457889999999999999999999985
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=342.31 Aligned_cols=257 Identities=21% Similarity=0.317 Sum_probs=202.5
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
++||.|..+.||+|+. +.+..||||++.... ....+.+.+|+..|+.++||||++++..|..+...|+||.||.+|++
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ 111 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSL 111 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcH
Confidence 4899999999999995 468999999998653 23357899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.++++..-. ..+++..+..|.+++++||.|||. +|.||||||+.||||+++|.+||+|||.+..+...+.
T Consensus 112 ldIik~~~~----~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~--- 181 (516)
T KOG0582|consen 112 LDIIKTYYP----DGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD--- 181 (516)
T ss_pred HHHHHHHcc----ccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCc---
Confidence 999976533 348899999999999999999999 9999999999999999999999999998776544321
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
+. .......+||++|||||++.. ..|+.|+|||||||+..||++|..||......
T Consensus 182 ----R~-----------------~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-- 238 (516)
T KOG0582|consen 182 ----RQ-----------------VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-- 238 (516)
T ss_pred ----ee-----------------eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--
Confidence 00 111256788999999999643 45999999999999999999999999543322
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+...+....+... .... +........+.+.+++..||++||++|||++++++
T Consensus 239 ---kvLl~tLqn~pp~~~--t~~~-~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 239 ---KVLLLTLQNDPPTLL--TSGL-DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ---HHHHHHhcCCCCCcc--cccC-ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 222222333222111 0011 11111233447889999999999999999999875
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.3e-42 Score=355.10 Aligned_cols=240 Identities=23% Similarity=0.354 Sum_probs=204.6
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||||+.+. .+.||+|.+.+.. ..+.+...+|++++++++|||||.+++.|++..+.++|.||+.+ +
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~ 86 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-D 86 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-h
Confidence 369999999999999764 7899999998754 34467799999999999999999999999999999999999976 9
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|..+|... ..++++.+..|+.|+..||.|||+ .+|+|||+||.|||++..+++|++|||+|+.+...
T Consensus 87 L~~il~~d------~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---- 153 (808)
T KOG0597|consen 87 LFTILEQD------GKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---- 153 (808)
T ss_pred HHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccC----
Confidence 99999877 569999999999999999999999 99999999999999999999999999999976431
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
+...+...||+.|||||...+++|+..+|.||+|||+|||.+|++||.. ..
T Consensus 154 ------------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~s 204 (808)
T KOG0597|consen 154 ------------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RS 204 (808)
T ss_pred ------------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HH
Confidence 2334566789999999999999999999999999999999999999953 23
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+.++.+..+..... ......+..++...+.+||.+|.|..+++.
T Consensus 205 i~~Lv~~I~~d~v~~p-------------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 205 ITQLVKSILKDPVKPP-------------STASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHhcCCCCCc-------------ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 4445555444432111 123346888999999999999999988763
No 25
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=385.11 Aligned_cols=259 Identities=27% Similarity=0.377 Sum_probs=207.1
Q ss_pred cccccccCceEEEEEEECC--Cc----EEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLED--GH----TLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~--g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
...||+|.||.||+|.+.+ |. .||||.+++. +.+...+|.+|..+|++++|||||+++|+|.+....++++||
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley 776 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY 776 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence 4689999999999999764 43 4999999876 456678899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCC-CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 481 IPNGSLATALHGKPGM-VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|++|||..+|++.+.. .....++..+.+.++.|||+|+.||++ +++|||||.++|+|+++...+||+|||+|+.+.
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 9999999999876321 112468899999999999999999999 999999999999999999999999999999543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~ 638 (714)
..+... .... ..-...|||||.+.++.++.|+|||||||++||++| |..||..
T Consensus 854 ~~~yyr-~~~~-------------------------a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~ 907 (1025)
T KOG1095|consen 854 DKDYYR-KHGE-------------------------AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS 907 (1025)
T ss_pred hchhee-ccCc-------------------------cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC
Confidence 322111 0000 000234999999999999999999999999999999 8899954
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
..+.+ + +....+.+ . +-.|. .+...++++|..||+.+|++||++..++++++.+...
T Consensus 908 ~~n~~--v---~~~~~~gg-R---L~~P~--------~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 908 RSNFE--V---LLDVLEGG-R---LDPPS--------YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred cchHH--H---HHHHHhCC-c---cCCCC--------CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 43322 2 22122222 1 11122 2344789999999999999999999999999988653
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=324.30 Aligned_cols=239 Identities=21% Similarity=0.309 Sum_probs=200.1
Q ss_pred cCHHHHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhH---HHHHHHHHHHhccCCCCccceEEEEEeCCc
Q 005102 398 FDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRF---KEFQTEVEAIGKIRHSNIVTLRAYYWSVDE 473 (714)
Q Consensus 398 ~~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (714)
+.+++... -..||.|+||+|..++.+ +|..+|+|++.+..-.+. +...+|..+|+.+.||.++++++.|.+.+.
T Consensus 41 ~~l~dfe~--~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ 118 (355)
T KOG0616|consen 41 YSLQDFER--LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN 118 (355)
T ss_pred cchhhhhh--eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence 44454433 347999999999999976 489999999988754443 456789999999999999999999999999
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
.||||||+++|.|+.+++.. ++++++.++-+|.||+.||+|||+ .+|++|||||+|||+|.+|.+||+|||
T Consensus 119 lymvmeyv~GGElFS~Lrk~------~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKS------GRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred EEEEEeccCCccHHHHHHhc------CCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEecc
Confidence 99999999999999999876 569999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCC
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
+|+.+. ..+.+.+||+.|+|||.++...++.++|.|||||++|||+.|.
T Consensus 190 FAK~v~-------------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~ 238 (355)
T KOG0616|consen 190 FAKRVS-------------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGY 238 (355)
T ss_pred ceEEec-------------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCC
Confidence 998653 2355678999999999999999999999999999999999999
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCC
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKR 696 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R 696 (714)
+||..... ....+.+...+-.++..+.+ .+.+++...++.|-.+|
T Consensus 239 pPF~~~~~-----~~iY~KI~~~~v~fP~~fs~-------------~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 239 PPFYDDNP-----IQIYEKILEGKVKFPSYFSS-------------DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CCCcCCCh-----HHHHHHHHhCcccCCcccCH-------------HHHHHHHHHHhhhhHhh
Confidence 99964432 33344444444433333322 46688888888888888
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.9e-41 Score=357.86 Aligned_cols=259 Identities=26% Similarity=0.392 Sum_probs=198.5
Q ss_pred cccccccCceEEEEEEE------CCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCC-ceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVL------EDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVD-EKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~~lV~ 478 (714)
.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|++++.++ +||||++++++|...+ ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 35799999999999974 2357899999976432 3346789999999999 8999999999987644 578999
Q ss_pred eccCCCCHhhhhhCCCCCC--------------------------------------------------------CcCCC
Q 005102 479 DYIPNGSLATALHGKPGMV--------------------------------------------------------SFTPV 502 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~--------------------------------------------------------~~~~l 502 (714)
||+++|+|.+++....... ....+
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 9999999999987532100 01358
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhc
Q 005102 503 PWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQ 582 (714)
Q Consensus 503 ~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (714)
++.++.+++.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~------------------- 229 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------------------- 229 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcc-------------------
Confidence 889999999999999999999 8999999999999999999999999999975432110
Q ss_pred ccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcc
Q 005102 583 KSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLA 661 (714)
Q Consensus 583 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 661 (714)
........++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .+.. .......
T Consensus 230 -------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~-~~~~~~~-- 295 (338)
T cd05102 230 -------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQ-RLKDGTR-- 295 (338)
T ss_pred -------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHH-HHhcCCC--
Confidence 001122334677999999998899999999999999999997 999995332211 1111 1111111
Q ss_pred cccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 662 DVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 662 ~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
+.... .....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 296 ----~~~~~-----~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 296 ----MRAPE-----NATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ----CCCCC-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111 122368899999999999999999999999999865
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=352.62 Aligned_cols=241 Identities=23% Similarity=0.306 Sum_probs=198.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC----Cc-hhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG----GS-QRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
..||+|+||+||.|++. ++..||+|++... .. ...+.+.+|+.++++++ ||||+++++++......++||||+
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~ 102 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYC 102 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEec
Confidence 47999999999999864 5899999977653 12 23456778999999998 999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANI 560 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~ 560 (714)
.+|+|.+++... .++.+..+.+++.|++.|++|+|+ ++|+||||||+|||+|.+ +++||+|||++.....
T Consensus 103 ~gGdL~~~i~~~------g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~ 173 (370)
T KOG0583|consen 103 SGGDLFDYIVNK------GRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG 173 (370)
T ss_pred CCccHHHHHHHc------CCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence 999999999874 468889999999999999999999 999999999999999999 9999999999986531
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CC-chhhhHHHHHHHHHHHhCCCcccc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PS-QKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
. .....+..||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.+
T Consensus 174 ~----------------------------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d 225 (370)
T KOG0583|consen 174 E----------------------------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD 225 (370)
T ss_pred C----------------------------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 0 12345667899999999999877 75 789999999999999999999954
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
................+...++ ..++..++.+|+..||.+|+|+.+++
T Consensus 226 -----~~~~~l~~ki~~~~~~~p~~~~------------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 226 -----SNVPNLYRKIRKGEFKIPSYLL------------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred -----ccHHHHHHHHhcCCccCCCCcC------------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 2223333333333332222221 23678999999999999999999998
No 29
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8e-41 Score=345.85 Aligned_cols=263 Identities=22% Similarity=0.312 Sum_probs=199.3
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+||+|+||+||.|+.++ |+.+|+|++++... ...+....|-++|...++|+||+++..|++.+.+||||||++|||
T Consensus 148 ~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD 227 (550)
T KOG0605|consen 148 VIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGD 227 (550)
T ss_pred eeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCcc
Confidence 79999999999999765 99999999998643 334567889999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+..+|... ..|++..++.++.+++-|++.+|. .|+|||||||+|+|||..|++||+||||+.-+.......
T Consensus 228 ~mTLL~~~------~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 228 MMTLLMRK------DTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred HHHHHHhc------CcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 99999876 468999999999999999999999 999999999999999999999999999997554321110
Q ss_pred C------ccCCC---CCCCCc----------hhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHH
Q 005102 566 T------LQSNR---MPAEKP----------QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626 (714)
Q Consensus 566 ~------~~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl 626 (714)
. ..... .+...+ ...+..++...-.......+|||.|||||++.+..|+..+|.||+|||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 0 00000 000000 1111222223334445567899999999999999999999999999999
Q ss_pred HHHHhCCCccccCCCCc--chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 627 LEMITGRTAVVQVGSSE--MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 627 ~elltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
|||+.|.+||......+ ..++.|... ...++- .....+..++|.+|+. ||++|--
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~-----l~fP~~-----------~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIVNWRET-----LKFPEE-----------VDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhhh-----ccCCCc-----------CcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999994332211 112222211 111100 1112467899999999 9999965
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.6e-40 Score=343.55 Aligned_cols=261 Identities=21% Similarity=0.319 Sum_probs=196.8
Q ss_pred ccccccCceEEEEEEECC-----------------CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEe
Q 005102 409 FVLGKSGIGIVYKVVLED-----------------GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (714)
+.||+|+||.||+|.+++ +..||+|.+.... .....+|.+|++++.+++||||+++++++..
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 90 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVD 90 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEec
Confidence 479999999999998643 3479999987653 3335679999999999999999999999999
Q ss_pred CCceeEEEeccCCCCHhhhhhCCCCC-------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCC
Q 005102 471 VDEKLLIYDYIPNGSLATALHGKPGM-------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPS 537 (714)
Q Consensus 471 ~~~~~lV~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~ 537 (714)
.+..++||||+++|+|.+++...... .....++|..+.+++.||+.||+|||+ .+|+||||||+
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH~dlkp~ 167 (304)
T cd05096 91 EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDLATR 167 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccccCcchh
Confidence 99999999999999999998643210 011357889999999999999999999 89999999999
Q ss_pred CeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchh
Q 005102 538 NILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW 617 (714)
Q Consensus 538 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~ 617 (714)
|||+++++.+||+|||+++....... ........++..|+|||++.+..++.++
T Consensus 168 Nill~~~~~~kl~DfG~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 221 (304)
T cd05096 168 NCLVGENLTIKIADFGMSRNLYAGDY--------------------------YRIQGRAVLPIRWMAWECILMGKFTTAS 221 (304)
T ss_pred heEEcCCccEEECCCccceecccCce--------------------------eEecCcCCCCccccCHHHHhcCCCCchh
Confidence 99999999999999999875432110 0111223346779999999888999999
Q ss_pred hhHHHHHHHHHHHh--CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC
Q 005102 618 DIYSYGVILLEMIT--GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK 695 (714)
Q Consensus 618 DVwS~Gvvl~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~ 695 (714)
||||||+++|||++ +..||... ........+......... .. .....+ .....+.+++.+||+.||++
T Consensus 222 Dv~slG~~l~el~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~--~~-~~~~~~-----~~~~~~~~li~~cl~~~p~~ 291 (304)
T cd05096 222 DVWAFGVTLWEILMLCKEQPYGEL--TDEQVIENAGEFFRDQGR--QV-YLFRPP-----PCPQGLYELMLQCWSRDCRE 291 (304)
T ss_pred hhHHHHHHHHHHHHccCCCCCCcC--CHHHHHHHHHHHhhhccc--cc-cccCCC-----CCCHHHHHHHHHHccCCchh
Confidence 99999999999997 45566432 222222222222221110 00 000011 12236889999999999999
Q ss_pred CCCHHHHHHHHhh
Q 005102 696 RPTMRHISDALDR 708 (714)
Q Consensus 696 RPt~~evl~~L~~ 708 (714)
|||+++|.+.|++
T Consensus 292 RPs~~~i~~~l~~ 304 (304)
T cd05096 292 RPSFSDIHAFLTE 304 (304)
T ss_pred CcCHHHHHHHHhC
Confidence 9999999998864
No 31
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=342.64 Aligned_cols=242 Identities=22% Similarity=0.369 Sum_probs=199.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|.||.||||.+. +++.||+|++... .....++.++|+.++..++++||.++||.|..+...+++||||.+|++
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 47999999999999964 5899999999865 445567899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+.++.. ..+.+..+.-|+++++.||.|||+ .+.+|||||++|||+..+|.+||+|||++-.+...
T Consensus 99 ~~lL~~~------~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~----- 164 (467)
T KOG0201|consen 99 LDLLKSG------NILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT----- 164 (467)
T ss_pred hhhhccC------CCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeech-----
Confidence 9999765 334777788899999999999999 89999999999999999999999999998765422
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.....+.+||++|||||++.+..|+.|+||||||++.+||++|.+|+........
T Consensus 165 -----------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-- 219 (467)
T KOG0201|consen 165 -----------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-- 219 (467)
T ss_pred -----------------------hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--
Confidence 1123567899999999999988999999999999999999999999954322100
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+. .+.+-.-|.+.+ .....+.+++..||++||+.||+|.++++
T Consensus 220 ---lf-------lIpk~~PP~L~~-----~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 220 ---LF-------LIPKSAPPRLDG-----DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ---EE-------eccCCCCCcccc-----ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 00 011111222322 23335889999999999999999999875
No 32
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.1e-40 Score=321.67 Aligned_cols=254 Identities=23% Similarity=0.295 Sum_probs=194.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchh--HHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQR--FKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~~~ 483 (714)
+.|++|+||.||+|+++ +++.||+|+++...... .-...+||.+|.+++|||||.+..+... -+..|+|||||+.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh 161 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH 161 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence 46999999999999975 58899999998653221 1245799999999999999999998875 4578999999987
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
||..+++... +++...+++.++.|+++|++|||. +.|+|||||++|+|+...|.+||+|||+|+.+....
T Consensus 162 -DLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~- 231 (419)
T KOG0663|consen 162 -DLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL- 231 (419)
T ss_pred -hHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCCc-
Confidence 9999998664 578999999999999999999999 999999999999999999999999999999875431
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
...+..+-|.+|+|||.+.+.+ |+++.|+||+|||+.||+++++.|. +..
T Consensus 232 ---------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~--G~s 282 (419)
T KOG0663|consen 232 ---------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP--GKS 282 (419)
T ss_pred ---------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC--CCc
Confidence 1122334588999999998865 8999999999999999999999884 333
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCC-----------CCCC--------CcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYL-----------APDA--------DKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~-----------~~~~--------~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
+.+....+-..+.. ..+.+-|.+ ...+ ....-...-.+++...+.+||.+|.|++|.+
T Consensus 283 E~dQl~~If~llGt---Pte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L 359 (419)
T KOG0663|consen 283 EIDQLDKIFKLLGT---PSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGL 359 (419)
T ss_pred hHHHHHHHHHHhCC---CccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhh
Confidence 43333322221111 011111100 0000 0000124567899999999999999999876
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 360 ~ 360 (419)
T KOG0663|consen 360 K 360 (419)
T ss_pred c
Confidence 4
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.2e-40 Score=349.60 Aligned_cols=240 Identities=22% Similarity=0.261 Sum_probs=193.4
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+||+|+||.||+++.+ +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 6999999999999975 58999999987532 2334567899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---- 148 (323)
T cd05571 82 LFFHLSRE------RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---- 148 (323)
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----
Confidence 99998754 458999999999999999999999 89999999999999999999999999998743211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 149 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~----- 199 (323)
T cd05571 149 ------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----- 199 (323)
T ss_pred ------------------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-----
Confidence 011123457889999999999999999999999999999999999994321
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
............. ..... ...++.+++.+||+.||++|| ++.++++
T Consensus 200 ~~~~~~~~~~~~~--------~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 200 HEKLFELILMEEI--------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHHcCCC--------CCCCC-----CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1111111111111 11111 123578999999999999999 7888764
No 34
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.5e-40 Score=347.59 Aligned_cols=237 Identities=21% Similarity=0.261 Sum_probs=190.6
Q ss_pred ccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||.||+|+..+ ++.||+|++... .......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 6999999999999864 789999998753 233446788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~----- 146 (312)
T cd05585 81 FHHLQRE------GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD----- 146 (312)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-----
Confidence 9999754 458999999999999999999999 89999999999999999999999999998753211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||... ..
T Consensus 147 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~ 198 (312)
T cd05585 147 -----------------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NV 198 (312)
T ss_pred -----------------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----CH
Confidence 01112345788999999999999999999999999999999999999532 12
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
.+..+........ .... ....+.+++.+||+.||++||++.++
T Consensus 199 ~~~~~~~~~~~~~--------~~~~-----~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 199 NEMYRKILQEPLR--------FPDG-----FDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred HHHHHHHHcCCCC--------CCCc-----CCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 2223322222111 1111 12357799999999999999864333
No 35
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=351.24 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=200.7
Q ss_pred ccccccCceEEEEEEECC--C--cE-EEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED--G--HT-LAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~--g--~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|.||+||+|+++. + .. ||||..+.. .....++|.+|+++|++++|||||+++|++......|+|||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 589999999999999754 2 23 899998852 345567899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
|.||+|.++|.... ..++..++.+++.+.|.||+|||+ +++|||||.++|+|++.++.+||+|||+++.-..
T Consensus 243 ~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 243 CNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred cCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 99999999998774 248999999999999999999999 9999999999999999999999999999875321
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~ 639 (714)
.. .......-...|+|||.+....|++++|||||||++||+++ |..||...
T Consensus 315 ~~----------------------------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 315 YV----------------------------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM 366 (474)
T ss_pred ee----------------------------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence 00 00000011345999999999999999999999999999999 88898433
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
. ..+........+.... .. . .....+..++.+||..+|++||||.++.+.|+.+...
T Consensus 367 ~-----~~~v~~kI~~~~~r~~------~~-~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 367 K-----NYEVKAKIVKNGYRMP------IP-S----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred C-----HHHHHHHHHhcCccCC------CC-C----CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 2 2222222222222110 00 0 1233567888899999999999999999999998653
No 36
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=345.30 Aligned_cols=254 Identities=30% Similarity=0.419 Sum_probs=209.4
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||-|.||.||.|.|+. ...||||.++.. ....++|.+|..+|+.++|||+|+++|+|......|||+|||.+|+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 4689999999999999976 678999999764 44568999999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.++|++... ..++-...+.+|.||+.|+.||.. +.+|||||.++|+|+.++..+||+|||+++++..+.
T Consensus 351 LdYLRecnr----~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT---- 419 (1157)
T KOG4278|consen 351 LDYLRECNR----SEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT---- 419 (1157)
T ss_pred HHHHHHhch----hhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCc----
Confidence 999987754 456777789999999999999999 999999999999999999999999999999875321
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 645 (714)
.+.........-|.|||.+....++.|+|||+|||+|||+.| |-.||. +.+
T Consensus 420 -----------------------YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP-----Gid 471 (1157)
T KOG4278|consen 420 -----------------------YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP-----GID 471 (1157)
T ss_pred -----------------------eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC-----Ccc
Confidence 111222223445999999999999999999999999999999 888884 233
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
+.+.+ ..++.+..+ -.| +.+...++++|+.||+++|.+||+++|+-+.+|.+..++
T Consensus 472 lSqVY-~LLEkgyRM---~~P--------eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 472 LSQVY-GLLEKGYRM---DGP--------EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred HHHHH-HHHhccccc---cCC--------CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 33322 223333221 112 123457999999999999999999999999999987654
No 37
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.3e-39 Score=344.74 Aligned_cols=240 Identities=21% Similarity=0.275 Sum_probs=192.5
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||+++.. +|+.||+|++... .......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 6999999999999975 5899999999764 22334567889999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|..++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---- 148 (323)
T cd05595 82 LFFHLSRE------RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---- 148 (323)
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----
Confidence 99988654 458899999999999999999999 89999999999999999999999999998743111
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 149 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---- 200 (323)
T cd05595 149 ------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---- 200 (323)
T ss_pred ------------------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH----
Confidence 0011234578899999999999999999999999999999999999943211
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
............. .... ....+.+++.+||+.||++|| ++.++++
T Consensus 201 -~~~~~~~~~~~~~--------~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 201 -ERLFELILMEEIR--------FPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -HHHHHHHhcCCCC--------CCCC-----CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1111111111111 1111 123577999999999999998 7887764
No 38
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.9e-39 Score=332.69 Aligned_cols=250 Identities=21% Similarity=0.365 Sum_probs=197.6
Q ss_pred cccccccCceEEEEEEEC----CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|+++ .+..||+|.++.... .....|.+|+.++++++||||+++++++...+..++||||++
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS 89 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC
Confidence 457999999999999864 367899999987533 334578999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++.+++.++.|++.||+|||+ ++++||||||+||+++.++.+|++|||.+.......
T Consensus 90 ~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 90 NGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 999999997643 358999999999999999999999 899999999999999999999999999765431110
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
........++..|+|||.+.+..++.++|||||||++||+++ |+.||.....
T Consensus 162 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~ 214 (266)
T cd05064 162 ---------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG 214 (266)
T ss_pred ---------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 001112223567999999999999999999999999999775 9999953321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
. +.... ..+... ..... .....+.+++.+||+.+|++|||++++.+.|+++
T Consensus 215 --~---~~~~~-~~~~~~------~~~~~-----~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 215 --Q---DVIKA-VEDGFR------LPAPR-----NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --H---HHHHH-HHCCCC------CCCCC-----CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1 11111 111111 00111 1233688999999999999999999999999875
No 39
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.4e-39 Score=349.55 Aligned_cols=268 Identities=25% Similarity=0.348 Sum_probs=202.4
Q ss_pred ccccCHHHHHHhccccccccCceEEEEEEE------CCCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEE
Q 005102 395 QVAFDLDELLKASAFVLGKSGIGIVYKVVL------EDGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRA 466 (714)
Q Consensus 395 ~~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~ 466 (714)
.+.|..+++.. .+.||+|+||.||+|++ .++..||||+++... ....+.+.+|++++..+ +||||+++++
T Consensus 29 ~~~~~~~~~~~--~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~ 106 (375)
T cd05104 29 KWEFPRNRLSF--GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLG 106 (375)
T ss_pred ccccchHHeeh--hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeee
Confidence 33444444332 45899999999999974 235689999997543 33346788999999999 8999999999
Q ss_pred EEEeCCceeEEEeccCCCCHhhhhhCCCCCC-------------------------------------------------
Q 005102 467 YYWSVDEKLLIYDYIPNGSLATALHGKPGMV------------------------------------------------- 497 (714)
Q Consensus 467 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~------------------------------------------------- 497 (714)
+|...+..++||||+++|+|.+++.......
T Consensus 107 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 186 (375)
T cd05104 107 ACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR 186 (375)
T ss_pred eeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence 9999999999999999999999986532100
Q ss_pred --------------------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 498 --------------------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 498 --------------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
....+++..+.+++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCcccee
Confidence 01247899999999999999999999 8999999999999999999999999999875
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... ........++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 264 ~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~ 317 (375)
T cd05104 264 IRNDSN--------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY 317 (375)
T ss_pred ccCccc--------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCC
Confidence 432110 001112234567999999999999999999999999999998 88888
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
...... .....+ ....... ..+. . ...++.+++.+||+.||++|||++||++.|++.
T Consensus 318 ~~~~~~-~~~~~~----~~~~~~~---~~~~----~----~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 318 PGMPVD-SKFYKM----IKEGYRM---LSPE----C----APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCch-HHHHHH----HHhCccC---CCCC----C----CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 433211 112221 1111100 0111 1 123688999999999999999999999999874
No 40
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.5e-39 Score=345.11 Aligned_cols=240 Identities=23% Similarity=0.280 Sum_probs=193.5
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||++... +|+.||+|++... .......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 6899999999999975 5899999999754 22344678899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---- 148 (328)
T cd05593 82 LFFHLSRE------RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---- 148 (328)
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----
Confidence 99988654 458999999999999999999999 89999999999999999999999999998743211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 149 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~----- 199 (328)
T cd05593 149 ------------------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----- 199 (328)
T ss_pred ------------------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-----
Confidence 011123457889999999998899999999999999999999999994321
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
..+.......... .+... ....+.+++.+||+.||++|| ++.|+++
T Consensus 200 ~~~~~~~~~~~~~--------~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 200 HEKLFELILMEDI--------KFPRT-----LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHhccCCc--------cCCCC-----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 1122222111111 11111 123577899999999999997 8888875
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-40 Score=307.05 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=204.4
Q ss_pred ccCHHHHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCC
Q 005102 397 AFDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD 472 (714)
Q Consensus 397 ~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 472 (714)
.++++++.. +..||+|.||.||.|+.+ ++..||+|++.+.. .....++.+|+++-+.++||||+++++||.+..
T Consensus 18 ~~~l~dfei--gr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 18 TWTLDDFEI--GRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccchhhccc--cccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 345555543 568999999999999965 47899999997752 223467899999999999999999999999999
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
..|+++||.+.|+++..|.+.+. .++++.....++.|+|.||.|+|. ++||||||||+|+|++.++..|++||
T Consensus 96 riyLilEya~~gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred eeEEEEEecCCchHHHHHHhccc----ccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCC
Confidence 99999999999999999986543 468888999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhC
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG 632 (714)
|-+...+ .....+..||..|.|||+..+...+..+|+|++||+.||++.|
T Consensus 169 GwsV~~p------------------------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg 218 (281)
T KOG0580|consen 169 GWSVHAP------------------------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVG 218 (281)
T ss_pred CceeecC------------------------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhc
Confidence 9775432 1123455789999999999999999999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+||.... ..+..++..+.+ ..+|. .......++|.+|+..+|.+|.+..|+++
T Consensus 219 ~ppFes~~-----~~etYkrI~k~~-----~~~p~--------~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 219 LPPFESQS-----HSETYKRIRKVD-----LKFPS--------TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred CCchhhhh-----hHHHHHHHHHcc-----ccCCc--------ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 99995432 112222222222 12221 11225779999999999999999999875
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-40 Score=344.72 Aligned_cols=240 Identities=24% Similarity=0.329 Sum_probs=201.5
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+-||+|+.|.|-.|++ .+|+.+|||++.+.. ......+.+|+-+|+-+.|||++++++++++..+.|+|.||+++|
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gG 97 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGG 97 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCc
Confidence 4699999999999996 469999999998752 222356889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
.|++++-.+ .++++.++.+++.||+.|+.|+|. .+|+||||||+|+|+|.++++||+|||+|..-..+
T Consensus 98 ELFdylv~k------G~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--- 165 (786)
T KOG0588|consen 98 ELFDYLVRK------GPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--- 165 (786)
T ss_pred hhHHHHHhh------CCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCC---
Confidence 999999877 568999999999999999999999 89999999999999999999999999999764321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
....+.+|++.|.|||++.|.+| +.++||||.|||||.|+||+.||. +
T Consensus 166 --------------------------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----D 214 (786)
T KOG0588|consen 166 --------------------------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----D 214 (786)
T ss_pred --------------------------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----C
Confidence 22345578999999999999998 678999999999999999999994 3
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+...+.........++.. ...++.+|+.+|+..||++|.|++||++
T Consensus 215 dNir~LLlKV~~G~f~MPs~-------------Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 215 DNIRVLLLKVQRGVFEMPSN-------------ISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred ccHHHHHHHHHcCcccCCCc-------------CCHHHHHHHHHHhccCccccccHHHHhh
Confidence 34444443333333222211 1225779999999999999999999976
No 43
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-40 Score=340.43 Aligned_cols=260 Identities=22% Similarity=0.299 Sum_probs=206.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|-||+|..+....+..||||+++..... .+++|.+|+++|.+++|||||+++|.|..++..++|+|||++|+|
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDL 622 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDL 622 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcH
Confidence 4679999999999999988899999999987544 358999999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.++... .+.-...++|+.|||.|++||.+ .++|||||.++|+|+|.++++||+|||+++-+...+.+.
T Consensus 623 nqFl~aheap----t~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~- 694 (807)
T KOG1094|consen 623 NQFLSAHELP----TAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR- 694 (807)
T ss_pred HHHHHhccCc----ccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCcee-
Confidence 9999877431 13345567899999999999999 899999999999999999999999999999654332111
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh--CCCccccCCCCcc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT--GRTAVVQVGSSEM 644 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt--G~~p~~~~~~~~~ 644 (714)
. ....+-...|||||.+.-+++++++|||+||+++||+++ ...||.+.. +.
T Consensus 695 v-------------------------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt--~e 747 (807)
T KOG1094|consen 695 V-------------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT--DE 747 (807)
T ss_pred e-------------------------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh--HH
Confidence 0 111122356999999999999999999999999999987 678885432 23
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
+.++-..........-.-...|. -+...++++|.+||..|.++||+++++...|++..
T Consensus 748 ~vven~~~~~~~~~~~~~l~~P~--------~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 748 QVVENAGEFFRDQGRQVVLSRPP--------ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred HHHHhhhhhcCCCCcceeccCCC--------cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 33443333333332211111222 23447899999999999999999999999998753
No 44
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=329.74 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=199.5
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhc--cCCCCccceEEEEEeCC----ceeEEEeccCC
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGK--IRHSNIVTLRAYYWSVD----EKLLIYDYIPN 483 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~e~~~~ 483 (714)
+||+|+||.||||.+. ++.||||++.... .+.|+.|-+|.+. ++|+||++++++-.... +.+||+||.+.
T Consensus 217 li~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k 292 (534)
T KOG3653|consen 217 LIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK 292 (534)
T ss_pred HhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence 7999999999999996 6999999997643 3567777777654 58999999999877555 78999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCC------CCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP------KKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~------~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|+|.++|..+ .++|....+|+..+++||+|||+..+ ++|+|||||++|||+.+|+++.|+|||+|..
T Consensus 293 GsL~dyL~~n-------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 293 GSLCDYLKAN-------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred CcHHHHHHhc-------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999865 48999999999999999999998543 3799999999999999999999999999987
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CC-----chhhhHHHHHHHHHHHh
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PS-----QKWDIYSYGVILLEMIT 631 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~~~DVwS~Gvvl~ellt 631 (714)
+..... .......+||..|||||++.+.. +. .+.||||+|.|||||++
T Consensus 366 ~~p~~~--------------------------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~S 419 (534)
T KOG3653|consen 366 LEPGKP--------------------------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIAS 419 (534)
T ss_pred ecCCCC--------------------------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHh
Confidence 753211 12334478999999999997643 22 36899999999999999
Q ss_pred CCCccccCCCCcc-----------hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 632 GRTAVVQVGSSEM-----------DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 632 G~~p~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
+..-++.....+. .-.+-++..+-.++ ..|.++........+.-+.+.+..||+.||+.|.|+.
T Consensus 420 RC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK-----~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 420 RCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK-----QRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc-----cCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 7654421111100 01112222222221 1233333222234566789999999999999999999
Q ss_pred HHHHHHhhhhccC
Q 005102 701 HISDALDRLIVSS 713 (714)
Q Consensus 701 evl~~L~~i~~~~ 713 (714)
=|.+++.++....
T Consensus 495 Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 495 CVEERMAELMMLW 507 (534)
T ss_pred HHHHHHHHHhccC
Confidence 9999999886543
No 45
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.4e-39 Score=336.77 Aligned_cols=246 Identities=21% Similarity=0.217 Sum_probs=192.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|... +|+.||||.+..... .....+.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g 85 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCC
Confidence 47999999999999864 689999999875422 22346789999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 86 ~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 86 DLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 99988764322 358899999999999999999999 899999999999999999999999999987542110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 157 ---------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~- 208 (285)
T cd05631 157 ---------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV- 208 (285)
T ss_pred ---------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-
Confidence 1122356889999999999999999999999999999999999995432211
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
....+........ ...... ....+.+++.+||+.||++||+ ++++++
T Consensus 209 -~~~~~~~~~~~~~-------~~~~~~-----~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 209 -KREEVDRRVKEDQ-------EEYSEK-----FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -hHHHHHHHhhccc-------ccCCcc-----CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 1111111111100 001111 1235789999999999999997 777765
No 46
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=329.01 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=190.5
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC-----ceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-----EKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lV~e~~ 481 (714)
.+++|.|+||.||+|.... ++.||||++...... -.+|+++|++++|||||++.-+|.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 3589999999999999754 799999998765432 247999999999999999998887532 235899999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANI 560 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~ 560 (714)
+. +|.+.++.-... .++++...++-+..||.+||+|||+ .+|+||||||.|+|+|.+ |.+||||||.|+.+..
T Consensus 105 P~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred hH-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 87 999988742111 1457788899999999999999999 899999999999999976 9999999999998754
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.+. ..+...|++|+|||.+.+. .|+.+.||||.|||+.||+-|++.|...
T Consensus 179 ~ep-----------------------------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~ 229 (364)
T KOG0658|consen 179 GEP-----------------------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD 229 (364)
T ss_pred CCC-----------------------------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC
Confidence 321 1223347899999999875 4899999999999999999999988532
Q ss_pred CCCcchhHHHHHHHHhh---------cCCcccccCCCCCCCC----CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEE---------KKPLADVLDPYLAPDA----DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~---------~~~~~~~~d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.....+++.++ ++.- .....+...|.+.... .......+.++++.++++++|.+|.++.|++.
T Consensus 230 -s~~dQL~eIik-~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 230 -SSVDQLVEIIK-VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred -CHHHHHHHHHH-HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 22223333322 1110 0011111122222211 11223346889999999999999999998874
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.4e-39 Score=339.60 Aligned_cols=238 Identities=19% Similarity=0.240 Sum_probs=193.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 86 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGG 86 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCC
Confidence 47999999999999976 58999999986532 223456889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 87 ~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--- 154 (291)
T cd05612 87 ELFSYLRNS------GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--- 154 (291)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---
Confidence 999999755 458899999999999999999999 89999999999999999999999999998754211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---- 202 (291)
T cd05612 155 ----------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN---- 202 (291)
T ss_pred ----------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----
Confidence 112346888999999998889999999999999999999999994321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
.............. ..... ...+.+++.+||+.||.+||+ ++|+++
T Consensus 203 -~~~~~~~i~~~~~~--------~~~~~-----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 203 -PFGIYEKILAGKLE--------FPRHL-----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred -HHHHHHHHHhCCcC--------CCccC-----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 11222222222111 11111 225789999999999999995 777664
No 48
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=345.29 Aligned_cols=238 Identities=19% Similarity=0.253 Sum_probs=192.3
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+|+.+ +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 102 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG 102 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence 357999999999999986 48899999987532 23345788999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 103 ~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 103 GELFTHLRKA------GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred ChHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 9999999765 457889999999999999999999 89999999999999999999999999998754211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 172 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--- 219 (329)
T PTZ00263 172 -----------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT--- 219 (329)
T ss_pred -----------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC---
Confidence 112346888999999999889999999999999999999999994321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHIS 703 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl 703 (714)
..+...........+ ... ....+.+++.+||+.||++||+ +++++
T Consensus 220 --~~~~~~~i~~~~~~~--------p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 220 --PFRIYEKILAGRLKF--------PNW-----FDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred --HHHHHHHHhcCCcCC--------CCC-----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 112222222211111 111 1125779999999999999997 56665
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.2e-39 Score=349.54 Aligned_cols=267 Identities=22% Similarity=0.328 Sum_probs=202.0
Q ss_pred ccCHHHHHHhccccccccCceEEEEEEEC------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEE
Q 005102 397 AFDLDELLKASAFVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYY 468 (714)
Q Consensus 397 ~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 468 (714)
.+..++... .+.||+|+||.||+|+.. ++..||||++.... ......+.+|+++++.+ +|+||++++++|
T Consensus 34 ~~~~~~~~~--~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQF--GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHcee--hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 344444332 458999999999998842 24589999997643 23345788999999999 899999999999
Q ss_pred EeCCceeEEEeccCCCCHhhhhhCCCCC----------------------------------------------------
Q 005102 469 WSVDEKLLIYDYIPNGSLATALHGKPGM---------------------------------------------------- 496 (714)
Q Consensus 469 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 496 (714)
...+..++||||+++|+|.+++......
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 9999999999999999999998643110
Q ss_pred ------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 497 ------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 497 ------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
....++++.++++|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-
Confidence 001357889999999999999999999 8999999999999999999999999999875432110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~ 643 (714)
........++..|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 268 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~ 322 (374)
T cd05106 268 -------------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS 322 (374)
T ss_pred -------------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence 001112234567999999998899999999999999999997 999995432211
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.... ...... .+.... . ...++.+++.+||+.||++|||+.+|++.|+++.
T Consensus 323 -~~~~----~~~~~~------~~~~~~-~----~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 323 -KFYK----MVKRGY------QMSRPD-F----APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -HHHH----HHHccc------CccCCC-C----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1111 111111 011111 1 1236889999999999999999999999999875
No 50
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-38 Score=325.34 Aligned_cols=246 Identities=23% Similarity=0.407 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||++.++++..+|+|.+..... ..++|.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 88 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLN 88 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHH
Confidence 46999999999999998888999999875432 34678999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.++......
T Consensus 89 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~------ 154 (256)
T cd05114 89 YLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE------ 154 (256)
T ss_pred HHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCc------
Confidence 987543 348899999999999999999999 899999999999999999999999999987542110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... . .
T Consensus 155 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--~---~ 208 (256)
T cd05114 155 ---------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--N---Y 208 (256)
T ss_pred ---------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--H---H
Confidence 001111223557999999988889999999999999999999 899984321 1 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
+.+........ ...+.. ....+.+++.+||+.+|++||+++++++.|.
T Consensus 209 ~~~~~i~~~~~----~~~~~~--------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 209 EVVEMISRGFR----LYRPKL--------ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHHHHCCCC----CCCCCC--------CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 22222211111 111111 1236789999999999999999999998873
No 51
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.3e-39 Score=340.96 Aligned_cols=241 Identities=23% Similarity=0.293 Sum_probs=191.9
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCC----CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEG----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|+||.||+++.. +++.||||++... .......+.+|++++++++||||+++++++...+..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 36999999999999863 4789999998753 122335678899999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 82 ~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (323)
T cd05584 82 LSGGELFMHLERE------GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH 152 (323)
T ss_pred CCCchHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc
Confidence 9999999998755 357888999999999999999999 8999999999999999999999999999874321
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 153 ~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 153 E----------------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred C----------------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 1 011123457889999999998889999999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
....+......... +... ....+.+++.+||+.||++|| +++++++
T Consensus 205 -----~~~~~~~~~~~~~~--------~~~~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 205 -----RKKTIDKILKGKLN--------LPPY-----LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -----HHHHHHHHHcCCCC--------CCCC-----CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11222222222111 1111 123578999999999999999 7777765
No 52
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-40 Score=307.81 Aligned_cols=266 Identities=26% Similarity=0.342 Sum_probs=203.7
Q ss_pred ccccccCceEEEEEE-ECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC-----ceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-----EKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lV~e~~~ 482 (714)
+.+|+|||+-||.++ ..+++.+|+|++........+..++|++..++++|||+++++++..... ..|++++|..
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~ 106 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYK 106 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhc
Confidence 479999999999998 5678999999999887777888999999999999999999999876433 4899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
.|+|.+.+....... ..+++.++++|+.+|++||++||+..| ++.||||||.|||+.+++.+++.|||.++......
T Consensus 107 ~Gsl~d~i~~~k~kg--~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i 183 (302)
T KOG2345|consen 107 RGSLLDEIERLKIKG--NFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI 183 (302)
T ss_pred cccHHHHHHHHhhcC--CccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCccccceEe
Confidence 999999987654322 468999999999999999999999654 69999999999999999999999999987654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
... .+... .........|..|+|||.+. +...++++|||||||++|+|+.|..||...
T Consensus 184 ~~~--------------~~a~~-----lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~ 244 (302)
T KOG2345|consen 184 EGS--------------RQALR-----LQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI 244 (302)
T ss_pred ech--------------HHHHH-----HHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH
Confidence 100 00000 01112223477899999984 455799999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
...+..+. -.+..+.+.-... ....+.+.+++..|++.||.+||++.+++..++.+.
T Consensus 245 ~~~GgSla-------------LAv~n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 245 YQQGGSLA-------------LAVQNAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred hhcCCeEE-------------EeeeccccccCCC-CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 22111111 1111211111111 114457899999999999999999999999998764
No 53
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-39 Score=343.47 Aligned_cols=235 Identities=22% Similarity=0.310 Sum_probs=193.8
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+||+|+||+|+++..+. ++.+|||++++.. ..+.+..+.|.+|+... +||.+++++.+|++.++.|+||||+.|
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~G 453 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAG 453 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCC
Confidence 489999999999999864 7899999999863 34456778888888877 599999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
||+..+.+. ..+++..+.-|+..|+.||+|||+ ++||+||||.+|||+|.+|++||+|||+++..-..
T Consensus 454 gdm~~~~~~-------~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~-- 521 (694)
T KOG0694|consen 454 GDLMHHIHT-------DVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ-- 521 (694)
T ss_pred CcEEEEEec-------ccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccCCC--
Confidence 996655543 359999999999999999999999 99999999999999999999999999999843210
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
...+++..||+.|||||++.+..|+.++|.|||||+||||+.|..||.. +++
T Consensus 522 --------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g--ddE 573 (694)
T KOG0694|consen 522 --------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG--DDE 573 (694)
T ss_pred --------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC--CCH
Confidence 3356678899999999999999999999999999999999999999942 233
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
.++. ..++.+.. ..+. ....+...|+++.+.++|++|.-+
T Consensus 574 ee~F---dsI~~d~~--------~yP~-----~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 574 EEVF---DSIVNDEV--------RYPR-----FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHH---HHHhcCCC--------CCCC-----cccHHHHHHHHHHhccCcccccCC
Confidence 3322 22222221 1111 123367889999999999999765
No 54
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.5e-39 Score=339.54 Aligned_cols=192 Identities=26% Similarity=0.337 Sum_probs=166.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||+|+||.||+++.. +|..||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 90 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcH
Confidence 47999999999999986 488999999876532 3346799999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 91 ~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 157 (331)
T cd06649 91 DQVLKEA------KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 157 (331)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-----
Confidence 9999765 3588999999999999999999982 25999999999999999999999999998754211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 158 -------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 -------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred -------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 11223468889999999998999999999999999999999999943
No 55
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.2e-40 Score=325.64 Aligned_cols=239 Identities=21% Similarity=0.322 Sum_probs=201.2
Q ss_pred cccccCceEEEEEEE-CCCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVL-EDGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|.||+|-+|.. ..|+.||||.+++. +.++.-.+.+||+||+.++||||+.++.+|+..+...+||||..+|.
T Consensus 60 tLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~Ge 139 (668)
T KOG0611|consen 60 TLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGE 139 (668)
T ss_pred HhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCcc
Confidence 699999999999985 56999999999875 44455678899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|++++.+. +.|++.+++++++||..|+.|+|. ++++|||||.+|||+|+++++||+|||++-++....
T Consensus 140 LYDYiSer------~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k--- 207 (668)
T KOG0611|consen 140 LYDYISER------GSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK--- 207 (668)
T ss_pred HHHHHHHh------ccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhcccc---
Confidence 99999877 569999999999999999999999 999999999999999999999999999998775321
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
...+++|++-|.+||++.|.+| ++.+|-||+||+||.|+.|.-||+ +.
T Consensus 208 --------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD-----G~ 256 (668)
T KOG0611|consen 208 --------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD-----GR 256 (668)
T ss_pred --------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC-----Cc
Confidence 2335678899999999999888 688999999999999999999994 23
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
+....++.+-.... ..|.. .....-+|++||..||++|-|+.+|..-
T Consensus 257 Dhk~lvrQIs~GaY-----rEP~~---------PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 257 DHKRLVRQISRGAY-----REPET---------PSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred hHHHHHHHhhcccc-----cCCCC---------CchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 33334433322221 11211 1135578999999999999999999753
No 56
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.3e-39 Score=332.01 Aligned_cols=248 Identities=31% Similarity=0.504 Sum_probs=189.7
Q ss_pred ccccccCceEEEEEEEC-----CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-----DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||.|.||.||+|.+. .+..|+||.++.... ...+.|.+|++.+++++||||++++|++...+..++||||++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~ 84 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCP 84 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--T
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 47999999999999987 257899999976433 346789999999999999999999999998888999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++..... ..+++.++.+|+.||++||+|||+ ++++|+||+++||++++++.+||+|||+++......
T Consensus 85 ~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 85 GGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp TEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc----cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999987622 458999999999999999999999 899999999999999999999999999987652111
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. ............|+|||.+.+..++.++||||||+++|||++ |+.||.+.
T Consensus 158 ~--------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-- 209 (259)
T PF07714_consen 158 K--------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-- 209 (259)
T ss_dssp S--------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--
T ss_pred c--------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 0 011112223566999999988889999999999999999999 67887433
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
+..++.... ..... ...... ....+.+++.+||+.||++|||++++++.|
T Consensus 210 ---~~~~~~~~~-~~~~~------~~~~~~-----~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 210 ---DNEEIIEKL-KQGQR------LPIPDN-----CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---CHHHHHHHH-HTTEE------TTSBTT-----SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ccccccccc-ccccc------ceeccc-----hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 122222222 22111 001111 123688999999999999999999999886
No 57
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=354.63 Aligned_cols=261 Identities=20% Similarity=0.292 Sum_probs=205.3
Q ss_pred ccccccccCceEEEEEEECCC-cEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEE-EEe---C---CceeEE
Q 005102 407 SAFVLGKSGIGIVYKVVLEDG-HTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAY-YWS---V---DEKLLI 477 (714)
Q Consensus 407 ~~~~lG~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~-~~~---~---~~~~lV 477 (714)
..++|.+|||+.||.|....+ ..+|+|++...++...+...+||++|++|+ |+|||.+++. ... . -+.+|.
T Consensus 41 V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllL 120 (738)
T KOG1989|consen 41 VEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLL 120 (738)
T ss_pred EEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEee
Confidence 356899999999999998876 999999998888888899999999999997 9999999993 321 1 256899
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
||||.+|.|-+++..+-. ..|++.++++|+.|+++|+++||.+.| +|||||||-+||||+.+++.||||||.|..
T Consensus 121 mEyC~gg~Lvd~mn~Rlq----~~lte~eVLkIf~dv~~AVa~mH~~~p-PiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 121 MEYCKGGSLVDFMNTRLQ----TRLTEDEVLKIFYDVCEAVAAMHYLKP-PIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred hhhccCCcHHHHHHHHHh----ccCChHHHHHHHHHHHHHHHHHhcCCC-ccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 999999999999986533 459999999999999999999999765 899999999999999999999999998864
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc---CCCCCCchhhhHHHHHHHHHHHhCCC
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL---KVVKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
.-.... ..++. ..........-|+-|+|||++ .+..+++|+||||+||+||-|.....
T Consensus 196 ~~~~~~------------~~~e~-------~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~ 256 (738)
T KOG1989|consen 196 KILSPT------------SAQEV-------NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTT 256 (738)
T ss_pred ccCCCc------------cHHHH-------HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 321100 00000 001111122337789999998 46778999999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
||...+. ..+++....-. ........+.+||..||+.||++||++-+|+..+.++..
T Consensus 257 PFe~sg~-------------------laIlng~Y~~P-~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 257 PFEESGK-------------------LAILNGNYSFP-PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred CcCcCcc-------------------eeEEeccccCC-CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 9954322 12222222111 113456689999999999999999999999999988764
No 58
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.5e-38 Score=328.58 Aligned_cols=260 Identities=24% Similarity=0.374 Sum_probs=203.4
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||+||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 90 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 47999999999999852 346799999987665556789999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCC-------CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 483 NGSLATALHGKPG-------MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 483 ~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
+++|.+++..... ......+++.++++++.|++.||+|||+ ++++||||||+||++++++.+||+|||++
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 167 (288)
T cd05093 91 HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMS 167 (288)
T ss_pred CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEeccCCcc
Confidence 9999999874421 0111358999999999999999999999 89999999999999999999999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~ 634 (714)
+....... ........++..|+|||++.+..++.++|||||||++|||+| |+.
T Consensus 168 ~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~ 221 (288)
T cd05093 168 RDVYSTDY--------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 221 (288)
T ss_pred ccccCCce--------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 75432110 001112234567999999998889999999999999999999 898
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccCC
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSSD 714 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 714 (714)
||..... .+. ...... ... . ..... ...++.+++.+||+.||.+|||+.++.+.|+++..+++
T Consensus 222 p~~~~~~--~~~---~~~i~~-~~~-~-----~~~~~-----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~ 284 (288)
T cd05093 222 PWYQLSN--NEV---IECITQ-GRV-L-----QRPRT-----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASP 284 (288)
T ss_pred CCCCCCH--HHH---HHHHHc-CCc-C-----CCCCC-----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcc
Confidence 8843321 111 111111 110 0 01111 12368899999999999999999999999999987653
No 59
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.1e-38 Score=327.33 Aligned_cols=249 Identities=24% Similarity=0.435 Sum_probs=199.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||+++|+|.+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLD 90 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHH
Confidence 47999999999999988888999999875432 34689999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 91 ~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~------ 157 (261)
T cd05072 91 FLKSDEG----GKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE------ 157 (261)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCc------
Confidence 9975432 458899999999999999999999 899999999999999999999999999997643211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||++.+..++.++|||||||++|||+| |+.||.... ..+..
T Consensus 158 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~ 214 (261)
T cd05072 158 ---------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVM 214 (261)
T ss_pred ---------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHH
Confidence 001112234567999999988889999999999999999999 999984321 11122
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
..+ ...... +.. . ....++.+++.+||..+|++|||++++.+.|+++
T Consensus 215 ~~~----~~~~~~-----~~~-~-----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 215 SAL----QRGYRM-----PRM-E-----NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHH----HcCCCC-----CCC-C-----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 111 111110 110 1 1223678999999999999999999999999864
No 60
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.3e-38 Score=329.95 Aligned_cols=257 Identities=21% Similarity=0.271 Sum_probs=190.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|++++++++||||+++++++...+..++||||++ |+|
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l 89 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDL 89 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCH
Confidence 47999999999999976 588999999875432 233567899999999999999999999999889999999997 499
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 90 ~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---- 157 (288)
T cd07871 90 KQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT---- 157 (288)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC----
Confidence 99886543 347889999999999999999999 899999999999999999999999999987532110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......+++.|+|||.+.+ ..++.++||||+||++|||+||+.||..... .+
T Consensus 158 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~--~~ 211 (288)
T cd07871 158 ------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV--KE 211 (288)
T ss_pred ------------------------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HH
Confidence 01122345788999999865 5689999999999999999999999943221 11
Q ss_pred hHHHHHHHHhhcC-----------CcccccCCCCCCCCC---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK-----------PLADVLDPYLAPDAD---KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ .......+....... ......++.+++.+|+..||.+|||++|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 212 ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111111111000 000001111000000 0011235779999999999999999999874
No 61
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6e-39 Score=341.51 Aligned_cols=239 Identities=19% Similarity=0.231 Sum_probs=191.8
Q ss_pred cccccccCceEEEEEEECC--CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED--GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|.+++ +..||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~ 114 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVI 114 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC
Confidence 3579999999999998654 368999998653 22334578899999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 115 ~g~L~~~i~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 115 GGEFFTFLRRN------KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred CCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-
Confidence 99999999765 458899999999999999999999 89999999999999999999999999998754210
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 185 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~- 233 (340)
T PTZ00426 185 ------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP- 233 (340)
T ss_pred ------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-
Confidence 1123478899999999988899999999999999999999999953211
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
............. .+... ...+.+++.+||+.||++|+ +++++++
T Consensus 234 ----~~~~~~i~~~~~~--------~p~~~-----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 234 ----LLIYQKILEGIIY--------FPKFL-----DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ----HHHHHHHhcCCCC--------CCCCC-----CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1111121111111 11111 12467899999999999995 7887764
No 62
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=316.74 Aligned_cols=260 Identities=22% Similarity=0.333 Sum_probs=194.5
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCC-ccceEEEEEeCC------ceeEEEe
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSN-IVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~------~~~lV~e 479 (714)
.||+|+||+||+|+.+ +|+.||+|+++.... .......+|+.++++++|+| ||++++++...+ ..++|||
T Consensus 18 klGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe 97 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFE 97 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEE
Confidence 4999999999999964 689999999986533 23346789999999999999 999999999877 7889999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|++. +|.+++....... +.++...++.++.|+++||+|||+ ++|+||||||+||||+++|.+||+|||+|+...
T Consensus 98 ~~d~-DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 98 FLDR-DLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred eecc-cHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 9965 9999998764211 246678899999999999999999 999999999999999999999999999999654
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.+. ...+...+|.+|+|||++.+. .|++..||||+|||+.||++++..|..
T Consensus 172 ip~----------------------------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG 223 (323)
T KOG0594|consen 172 IPM----------------------------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPG 223 (323)
T ss_pred CCc----------------------------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCC
Confidence 221 112344568899999999987 689999999999999999999988843
Q ss_pred CCCCcchhHHHHHHHHh----hcCC-cccc--cCCCCCCCC---CcH----HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIE----EKKP-LADV--LDPYLAPDA---DKE----EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~----~~~~-~~~~--~d~~~~~~~---~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... .+...-+-..+. +.++ .... .++...... ... .......+++.+|++.+|.+|.|++.++.
T Consensus 224 ~se--~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 224 DSE--IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred CcH--HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 322 221111111111 1111 0000 011111110 000 01135779999999999999999999887
Q ss_pred H
Q 005102 705 A 705 (714)
Q Consensus 705 ~ 705 (714)
.
T Consensus 302 h 302 (323)
T KOG0594|consen 302 H 302 (323)
T ss_pred C
Confidence 4
No 63
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.3e-39 Score=338.22 Aligned_cols=236 Identities=22% Similarity=0.282 Sum_probs=188.8
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||.||+|+.+ +++.||||++.+. .....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 6999999999999976 4889999998753 223345677899998877 6999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 ~L~~~i~~~------~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--- 149 (320)
T cd05590 82 DLMFHIQKS------RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--- 149 (320)
T ss_pred hHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---
Confidence 999988755 458899999999999999999999 89999999999999999999999999998743211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~---- 200 (320)
T cd05590 150 -------------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN---- 200 (320)
T ss_pred -------------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC----
Confidence 011123457889999999998899999999999999999999999994321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
.............. .... ....+.+++.+||+.||++||++.
T Consensus 201 -~~~~~~~i~~~~~~--------~~~~-----~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 201 -EDDLFEAILNDEVV--------YPTW-----LSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred -HHHHHHHHhcCCCC--------CCCC-----CCHHHHHHHHHHcccCHHHCCCCC
Confidence 11222222221111 1111 123578999999999999999983
No 64
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.3e-38 Score=322.75 Aligned_cols=250 Identities=28% Similarity=0.392 Sum_probs=199.3
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|.+.+ ++.||+|.+.... ...+++.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHH
Confidence 479999999999999764 8899999987543 33567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++..... ..+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++......
T Consensus 91 ~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~----- 158 (263)
T cd05052 91 DYLRECNR----QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----- 158 (263)
T ss_pred HHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccce-----
Confidence 99875432 458999999999999999999999 899999999999999999999999999987653210
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
........++..|+|||.+.+..++.++|||||||++|||++ |..||... +.
T Consensus 159 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~ 211 (263)
T cd05052 159 ----------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DL 211 (263)
T ss_pred ----------------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CH
Confidence 000111223456999999998899999999999999999998 89998432 11
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.+....... .. .+..... ...++.+++.+||+.||++|||+.++++.|+++.
T Consensus 212 ~~~~~~~~~-~~------~~~~~~~-----~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 212 SQVYELLEK-GY------RMERPEG-----CPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred HHHHHHHHC-CC------CCCCCCC-----CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 222222111 11 1111111 2246889999999999999999999999999863
No 65
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.5e-39 Score=338.48 Aligned_cols=240 Identities=21% Similarity=0.300 Sum_probs=190.6
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||.||+|+... ++.||||++... .....+.+..|.+++..+ +||||+++++++...+..|+||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 69999999999999764 789999998763 223345677899998876 7999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|...+... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 150 (321)
T cd05591 82 DLMFQIQRS------RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-- 150 (321)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC--
Confidence 999988755 458899999999999999999999 899999999999999999999999999987432110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||.... ..
T Consensus 151 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~--~~ 202 (321)
T cd05591 151 --------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN--ED 202 (321)
T ss_pred --------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC--HH
Confidence 11123357889999999998899999999999999999999999994321 11
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-------CHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-------TMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-------t~~evl~ 704 (714)
............ .| .. ...++.+++.+||+.||++|| +++++++
T Consensus 203 ---~~~~~i~~~~~~-----~p---~~-----~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 203 ---DLFESILHDDVL-----YP---VW-----LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ---HHHHHHHcCCCC-----CC---CC-----CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 222222221111 01 01 123578999999999999999 6666653
No 66
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.9e-39 Score=340.95 Aligned_cols=241 Identities=22% Similarity=0.277 Sum_probs=192.0
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||++... +|+.||+|++... .......+.+|++++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 6999999999999975 5899999999753 22334567889999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.||+.||+|||+. .+|+||||||+|||+++++.+||+|||+++......
T Consensus 82 L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 150 (325)
T cd05594 82 LFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--- 150 (325)
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---
Confidence 99988654 4589999999999999999999952 589999999999999999999999999987432110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 151 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---- 201 (325)
T cd05594 151 -------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---- 201 (325)
T ss_pred -------------------------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH----
Confidence 011223478899999999998999999999999999999999999943211
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
............. .... ....+.+++.+||+.||++|+ ++.++++
T Consensus 202 -~~~~~~i~~~~~~--------~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 202 -EKLFELILMEEIR--------FPRT-----LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred -HHHHHHHhcCCCC--------CCCC-----CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 1122221111111 1111 123578999999999999996 8888864
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.5e-38 Score=338.53 Aligned_cols=247 Identities=20% Similarity=0.257 Sum_probs=195.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+..+ ++.||||++.... ....+.+.+|++++.+++||||+++++++...+..|+||||+++|
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 86 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGG 86 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCC
Confidence 479999999999999864 8999999997542 233457889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 87 DFRTLLNNL------GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 999999754 458899999999999999999999 8999999999999999999999999999875421
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 154 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~ 204 (333)
T cd05600 154 ---------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--N 204 (333)
T ss_pred ---------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--H
Confidence 11233568899999999998999999999999999999999999943221 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
+. ..........+ ..+.... .......++.+++.+||..+|++||+++++++.
T Consensus 205 ~~---~~~i~~~~~~~---~~~~~~~--~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 205 ET---WENLKYWKETL---QRPVYDD--PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HH---HHHHHhccccc---cCCCCCc--cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 11 11111111000 0111100 001123467899999999999999999999853
No 68
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.4e-38 Score=335.91 Aligned_cols=239 Identities=22% Similarity=0.283 Sum_probs=187.7
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||.||+|+..+ ++.||||+++... ....+.+..|..++... +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 69999999999999754 7899999987532 22334566777777654 8999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 82 DLMFHIQSS------GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 999998754 458899999999999999999999 899999999999999999999999999987532110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 151 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~--~- 201 (316)
T cd05592 151 --------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED--E- 201 (316)
T ss_pred --------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC--H-
Confidence 11123357889999999998899999999999999999999999995321 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR-HIS 703 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 703 (714)
.+......... +..... ....+.+++.+||+.||++||++. +++
T Consensus 202 --~~~~~~i~~~~--------~~~~~~-----~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 202 --DELFDSILNDR--------PHFPRW-----ISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred --HHHHHHHHcCC--------CCCCCC-----CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11122211111 111111 122577899999999999999875 443
No 69
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=317.15 Aligned_cols=239 Identities=23% Similarity=0.423 Sum_probs=202.1
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|+||.||++.++. |+.||||++... .+.+++.+|+.+|.+++.|++|++||.|......++|||||..|+..+
T Consensus 40 KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSD 117 (502)
T KOG0574|consen 40 KLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISD 117 (502)
T ss_pred HhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHH
Confidence 69999999999998764 999999998764 345789999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
+++.++ .+|++.++..|+++.++||+|||. ..-||||||+.|||++-+|.+||+|||.|-.+.+.
T Consensus 118 I~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT------- 182 (502)
T KOG0574|consen 118 IMRARR-----KPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT------- 182 (502)
T ss_pred HHHHhc-----CCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhh-------
Confidence 998765 679999999999999999999999 77899999999999999999999999999765432
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVN 648 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~ 648 (714)
.....+..||++|||||+++.-.|+.++||||+|++..||..|++||.+...
T Consensus 183 ---------------------MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP------- 234 (502)
T KOG0574|consen 183 ---------------------MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP------- 234 (502)
T ss_pred ---------------------HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc-------
Confidence 2234456789999999999988999999999999999999999999954321
Q ss_pred HHHHHHhhcCCccccc-CCCC-CCCC-CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 649 WMQLCIEEKKPLADVL-DPYL-APDA-DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 649 ~~~~~~~~~~~~~~~~-d~~~-~~~~-~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+..++ -|.- ++.+ .++.-..++-++++.||.++|++|-|+.++++
T Consensus 235 -----------MRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 235 -----------MRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred -----------cceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 11111 1111 1111 23455678999999999999999999988765
No 70
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.4e-38 Score=326.97 Aligned_cols=255 Identities=27% Similarity=0.418 Sum_probs=198.9
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|.... ...||+|.+..... .....|.+|++++++++||||+++++++...+..+++|||+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYL 90 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecC
Confidence 479999999999998643 25799999875533 33457899999999999999999999999888999999999
Q ss_pred CCCCHhhhhhCCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcc
Q 005102 482 PNGSLATALHGKPGMV----------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 551 (714)
++|+|.+++....... ....+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~L~d 167 (283)
T cd05048 91 AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCcEEECC
Confidence 9999999997542110 11458899999999999999999999 8999999999999999999999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 168 fg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~ 221 (283)
T cd05048 168 FGLSRDIYSADY--------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221 (283)
T ss_pred Ccceeecccccc--------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHc
Confidence 999875432110 001112234677999999988899999999999999999998
Q ss_pred -CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 632 -GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 632 -G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
|..||..... .++... +.... .. ... .....++.+++.+||+.||++|||++||++.|+++
T Consensus 222 ~g~~p~~~~~~--~~~~~~----i~~~~-~~-----~~~-----~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 222 YGLQPYYGFSN--QEVIEM----IRSRQ-LL-----PCP-----EDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCCCCCCCCCH--HHHHHH----HHcCC-cC-----CCc-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 9999853321 122211 11111 00 011 12234688999999999999999999999999864
No 71
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2e-38 Score=343.42 Aligned_cols=259 Identities=25% Similarity=0.314 Sum_probs=199.5
Q ss_pred cccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e 479 (714)
.++||+|+||.||+|++.. +..||||++..... ...+.+.+|+++++++. ||||+++++++...+..++|||
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 121 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence 3589999999999998632 35799999976433 33467999999999996 9999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCC---------------------------------------------------------------
Q 005102 480 YIPNGSLATALHGKPGM--------------------------------------------------------------- 496 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~--------------------------------------------------------------- 496 (714)
|+++|+|.++++.....
T Consensus 122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (400)
T cd05105 122 YCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYS 201 (400)
T ss_pred ecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhh
Confidence 99999999988653210
Q ss_pred ---------------------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEE
Q 005102 497 ---------------------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549 (714)
Q Consensus 497 ---------------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 549 (714)
.....+++.++.+++.|++.||+|||+ .+|+||||||+|||+++++.+||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~~~~~kL 278 (400)
T cd05105 202 DIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKI 278 (400)
T ss_pred hcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEEE
Confidence 001247889999999999999999999 89999999999999999999999
Q ss_pred cccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHH
Q 005102 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 550 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~el 629 (714)
+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||
T Consensus 279 ~DfGla~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~el 332 (400)
T cd05105 279 CDFGLARDIMHDSN--------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEI 332 (400)
T ss_pred EeCCcceecccccc--------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHH
Confidence 99999875432110 0111222346679999999988999999999999999999
Q ss_pred Hh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 630 IT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 630 lt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
++ |..||....... .. ......... +... ......+.+++.+||+.||++|||+.+|.+.|++
T Consensus 333 lt~g~~P~~~~~~~~-~~----~~~~~~~~~------~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 333 FSLGGTPYPGMIVDS-TF----YNKIKSGYR------MAKP-----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HHCCCCCCcccchhH-HH----HHHHhcCCC------CCCC-----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 97 999985322111 11 111111111 0011 1123468899999999999999999999999998
Q ss_pred hhc
Q 005102 709 LIV 711 (714)
Q Consensus 709 i~~ 711 (714)
+..
T Consensus 397 l~~ 399 (400)
T cd05105 397 LLP 399 (400)
T ss_pred HcC
Confidence 865
No 72
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.3e-38 Score=337.96 Aligned_cols=241 Identities=22% Similarity=0.322 Sum_probs=189.7
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|+.. +++.||+|++.+. .....+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 6999999999999976 4789999999764 223345678899998877 7999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|..++... ..+++..+..|+.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--- 149 (329)
T cd05618 82 DLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--- 149 (329)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---
Confidence 999988654 458999999999999999999999 89999999999999999999999999998743211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc-
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE- 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~- 643 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~ 204 (329)
T cd05618 150 -------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 204 (329)
T ss_pred -------------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC
Confidence 001123457889999999999999999999999999999999999995322211
Q ss_pred --chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 --MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 --~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
.....++........ ..++.. ....+.+++.+||+.||++||++
T Consensus 205 ~~~~~~~~~~~~i~~~~-------~~~p~~-----~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 205 PDQNTEDYLFQVILEKQ-------IRIPRS-----LSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred cccccHHHHHHHHhcCC-------CCCCCC-----CCHHHHHHHHHHhcCCHHHcCCC
Confidence 112222222221111 111111 12357799999999999999984
No 73
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2e-38 Score=328.98 Aligned_cols=247 Identities=22% Similarity=0.268 Sum_probs=191.2
Q ss_pred ccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||+||++..+ +++.||+|++..... ...+.+..|++++++++||||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999975 589999999875422 2235678899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---- 151 (280)
T cd05608 81 RYHIYNVDEE--NPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ---- 151 (280)
T ss_pred HHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC----
Confidence 9887543211 1458999999999999999999999 899999999999999999999999999987543211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 152 ------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~ 206 (280)
T cd05608 152 ------------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-EN 206 (280)
T ss_pred ------------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hH
Confidence 01122356888999999999999999999999999999999999995332211 11
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
........... .... ......+.+++.+||+.||++|| |++++++
T Consensus 207 ~~~~~~~~~~~--------~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 207 KELKQRILNDS--------VTYP-----DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHhhcccC--------CCCc-----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11111111100 0011 11233678999999999999999 6666664
No 74
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.5e-38 Score=323.59 Aligned_cols=249 Identities=26% Similarity=0.433 Sum_probs=202.6
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|...++..+|+|.+..........+.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLA 91 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHH
Confidence 47999999999999998899999999987766556789999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++....+ ..+++.++.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||.+.......
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~------ 158 (261)
T cd05148 92 FLRSPEG----QVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV------ 158 (261)
T ss_pred HHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCcc------
Confidence 9976543 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ..+..
T Consensus 159 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~ 214 (261)
T cd05148 159 ----------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVY 214 (261)
T ss_pred ----------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHH
Confidence 00112224567999999988889999999999999999999 899984321 11121
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
.. ...... +.... .....+.+++.+||+.||++|||++++++.|+++
T Consensus 215 ~~---~~~~~~-------~~~~~-----~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 215 DQ---ITAGYR-------MPCPA-----KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HH---HHhCCc-------CCCCC-----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 11 111110 00111 1223688999999999999999999999999864
No 75
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1e-38 Score=332.45 Aligned_cols=258 Identities=19% Similarity=0.285 Sum_probs=192.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 86 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNM 86 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCH
Confidence 47999999999999986 47899999987542 2234678899999999999999999999999999999999999877
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+..+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 154 (287)
T cd07848 87 LELLEEMP------NGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--- 154 (287)
T ss_pred HHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc---
Confidence 66554322 358899999999999999999999 899999999999999999999999999987653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 155 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~ 209 (287)
T cd07848 155 ------------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-Q 209 (287)
T ss_pred ------------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 001122346888999999998889999999999999999999999995432111 1
Q ss_pred hHHHHHHHH-----------hhcCCcccccCCCCCCCCCc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCI-----------EEKKPLADVLDPYLAPDADK-----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.. +.... ...........+........ ......+.+++.+||+.||++|||++|+++
T Consensus 210 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 210 LFT-IQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHH-HHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111 00000 00000000000000000000 012346889999999999999999999874
No 76
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3e-38 Score=333.66 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=196.6
Q ss_pred ccccccCceEEEEEEECC-Cc----EEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-GH----TLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|++.. +. .||+|++.... ....+++.+|+.+++.++||||++++|+|... ..++|+||++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~ 91 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 91 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCC
Confidence 479999999999998643 33 48999987543 33456789999999999999999999999764 5789999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+++++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 92 ~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 92 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred CCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 999999998653 358899999999999999999999 899999999999999999999999999998654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. .......++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 164 ~~--------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~- 216 (316)
T cd05108 164 KE--------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP- 216 (316)
T ss_pred cc--------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-
Confidence 10 00111223567999999999999999999999999999998 999984321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
..++.. ......... .+ + .....+.+++.+||+.||++|||+.+++..|..+...
T Consensus 217 ----~~~~~~-~~~~~~~~~---~~---~-----~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 217 ----ASEISS-ILEKGERLP---QP---P-----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ----HHHHHH-HHhCCCCCC---CC---C-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 111111 111111100 01 1 1223578999999999999999999999999987643
No 77
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.6e-38 Score=337.30 Aligned_cols=240 Identities=21% Similarity=0.310 Sum_probs=189.8
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||.||+|+.. +++.||||+++.. .....+.+.+|..++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 6999999999999975 4889999999764 223345688999999998 7999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 149 (329)
T cd05588 82 DLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--- 149 (329)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccC---
Confidence 999988654 458999999999999999999999 89999999999999999999999999998642110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC--
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS-- 642 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~-- 642 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||...+..
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~ 204 (329)
T cd05588 150 -------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN 204 (329)
T ss_pred -------------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc
Confidence 01112345788999999999999999999999999999999999999532211
Q ss_pred -cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 643 -EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 643 -~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
......+......... ..++.. ....+.+++.+||+.||++|||
T Consensus 205 ~~~~~~~~~~~~~~~~~-------~~~p~~-----~~~~~~~li~~~L~~dP~~R~~ 249 (329)
T cd05588 205 PDQNTEDYLFQVILEKQ-------IRIPRS-----LSVKASSVLKGFLNKDPKERLG 249 (329)
T ss_pred ccccchHHHHHHHHcCC-------CCCCCC-----CCHHHHHHHHHHhccCHHHcCC
Confidence 1112222222222211 111111 1235789999999999999998
No 78
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=331.43 Aligned_cols=263 Identities=22% Similarity=0.346 Sum_probs=209.5
Q ss_pred cccCHHHHHHhccccccccCceEEEEEEECC---C--cEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEE
Q 005102 396 VAFDLDELLKASAFVLGKSGIGIVYKVVLED---G--HTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469 (714)
Q Consensus 396 ~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~---g--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 469 (714)
+.+.+..-......+||.|-||.||+|.+.+ | -.||||..+.. .....+.|..|..+|+.++|||||+++|+|.
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 3344433333345689999999999999754 2 46899999874 4455678999999999999999999999996
Q ss_pred eCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEE
Q 005102 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549 (714)
Q Consensus 470 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 549 (714)
+ ...++|||.++.|.|..+|+.+. ..++......++.||+.||+|||+ .++|||||..+|||+....-+||
T Consensus 462 e-~P~WivmEL~~~GELr~yLq~nk-----~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKL 532 (974)
T KOG4257|consen 462 E-QPMWIVMELAPLGELREYLQQNK-----DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKL 532 (974)
T ss_pred c-cceeEEEecccchhHHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeee
Confidence 5 57899999999999999998775 458888999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHH
Q 005102 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 550 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~el 629 (714)
+|||+++.+.+....... ...-..-|||||.+.-.+++.++|||-|||.+||+
T Consensus 533 aDFGLSR~~ed~~yYkaS---------------------------~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 533 ADFGLSRYLEDDAYYKAS---------------------------RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred cccchhhhccccchhhcc---------------------------ccccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence 999999998754322110 01112349999999999999999999999999999
Q ss_pred Hh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 630 IT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 630 lt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
++ |..||....+.+. +..+-..... +.++.++..++.++.+||.+||.+||++.++...|.+
T Consensus 586 l~lGvkPfqgvkNsDV---------------I~~iEnGeRl--P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsd 648 (974)
T KOG4257|consen 586 LSLGVKPFQGVKNSDV---------------IGHIENGERL--PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSD 648 (974)
T ss_pred HHhcCCccccccccce---------------EEEecCCCCC--CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence 88 9999965544432 1111111111 1122355579999999999999999999999999998
Q ss_pred hhc
Q 005102 709 LIV 711 (714)
Q Consensus 709 i~~ 711 (714)
++.
T Consensus 649 v~q 651 (974)
T KOG4257|consen 649 VLQ 651 (974)
T ss_pred HHH
Confidence 764
No 79
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=319.87 Aligned_cols=258 Identities=21% Similarity=0.330 Sum_probs=194.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCC--CCchhHHHHHHHHHHHhccCCCCccceEEEEEe-----CCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGE--GGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-----VDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~~lV~e~ 480 (714)
+.||+|.||.|+.+..+ +|..||||++.. ......++..+|+++|+.++|+||+.+.+.+.. -+..|+|+|+
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el 107 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL 107 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence 36999999999999975 589999999984 345556788999999999999999999999875 3568999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
| ..||...++.. +.++...+..++.|+++||+|+|+ .+|+||||||+|+|++.+..+||+|||+|+....
T Consensus 108 M-etDL~~iik~~------~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 108 M-ETDLHQIIKSQ------QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred H-hhHHHHHHHcC------ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceeeccc
Confidence 9 45999999866 458899999999999999999999 8999999999999999999999999999997643
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-CCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
... ....+..+.|++|+|||.+. ...||.+.||||.|||+.||++|++.|..
T Consensus 178 ~~~--------------------------~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG- 230 (359)
T KOG0660|consen 178 FFE--------------------------DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG- 230 (359)
T ss_pred cCc--------------------------ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC-
Confidence 200 11223445699999999985 46799999999999999999999999842
Q ss_pred CCCcchhHHHHHHHHhhcCC----------cccccC--CCCCCCC-C--cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKP----------LADVLD--PYLAPDA-D--KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~----------~~~~~d--~~~~~~~-~--~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+..+..+.+......... ....+. |..+... . ........++++.+||..||.+|+|++|+++
T Consensus 231 -~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 231 -KDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred -CchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 2222222221111110000 000000 0000000 0 0112235789999999999999999999875
No 80
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6e-38 Score=327.39 Aligned_cols=258 Identities=25% Similarity=0.382 Sum_probs=202.9
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
..||+|+||.||+|... ++..+++|.+........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 90 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCC
Confidence 47999999999999853 356799999887666556789999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 483 NGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 483 ~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
+++|.+++...... .....+++..+++++.|++.||+|||+ ++|+||||||+||++++++.+||+||
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df 167 (291)
T cd05094 91 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDF 167 (291)
T ss_pred CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEECCC
Confidence 99999999754210 111358999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT- 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt- 631 (714)
|+++....... ........++..|+|||++.+..++.++|||||||++|||+|
T Consensus 168 g~a~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 221 (291)
T cd05094 168 GMSRDVYSTDY--------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTY 221 (291)
T ss_pred CcccccCCCce--------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence 99875432110 011122334677999999998899999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
|+.||..... ... +... ..... .. .. ......+.+++.+||+.||++|||+++|+++|+++..
T Consensus 222 g~~p~~~~~~--~~~---~~~~-~~~~~-~~-----~~-----~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 222 GKQPWFQLSN--TEV---IECI-TQGRV-LE-----RP-----RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCCCCCCCCH--HHH---HHHH-hCCCC-CC-----CC-----ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 9999843321 111 1111 11110 00 00 0123368899999999999999999999999999865
Q ss_pred c
Q 005102 712 S 712 (714)
Q Consensus 712 ~ 712 (714)
.
T Consensus 285 ~ 285 (291)
T cd05094 285 A 285 (291)
T ss_pred h
Confidence 4
No 81
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.4e-39 Score=341.14 Aligned_cols=238 Identities=24% Similarity=0.271 Sum_probs=190.0
Q ss_pred ccccccCceEEEEEEE----CCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVL----EDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+++. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 3699999999999885 357899999997642 2233467789999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 82 GGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred CCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 99999998654 458999999999999999999999 899999999999999999999999999987542110
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......||+.|+|||.+.+..++.++|||||||++|||+||+.||....
T Consensus 153 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-- 202 (318)
T cd05582 153 ----------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-- 202 (318)
T ss_pred ----------------------------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC--
Confidence 11123457889999999998889999999999999999999999994321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
. ............. +... ....+.+++.+||+.||++||++.+
T Consensus 203 ~---~~~~~~i~~~~~~--------~p~~-----~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 203 R---KETMTMILKAKLG--------MPQF-----LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred H---HHHHHHHHcCCCC--------CCCC-----CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1 1122222221111 1111 1235778999999999999999655
No 82
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.7e-38 Score=335.17 Aligned_cols=239 Identities=21% Similarity=0.283 Sum_probs=188.7
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|+.+ +|+.||+|.++... ....+.+..|..++... +||||+++++++...+..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 6999999999999986 48899999997642 22335567788888765 8999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~L~~~i~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 149 (316)
T cd05620 82 DLMFHIQDK------GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--- 149 (316)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---
Confidence 999998754 358899999999999999999999 89999999999999999999999999998642110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--~~ 202 (316)
T cd05620 150 -------------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--ED 202 (316)
T ss_pred -------------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HH
Confidence 001123457889999999999999999999999999999999999994321 11
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR-HIS 703 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 703 (714)
+......... +..... ...++.+++.+||+.||++||++. +++
T Consensus 203 ---~~~~~~~~~~--------~~~~~~-----~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 203 ---ELFESIRVDT--------PHYPRW-----ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ---HHHHHHHhCC--------CCCCCC-----CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1121111111 111111 123577899999999999999985 554
No 83
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.2e-38 Score=334.32 Aligned_cols=239 Identities=22% Similarity=0.302 Sum_probs=188.9
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||+||+|+..+ ++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 68999999999999864 7899999987642 22335567788888765 8999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 150 (316)
T cd05619 82 DLMFHIQSC------HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-- 150 (316)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--
Confidence 999998754 458899999999999999999999 899999999999999999999999999986421110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 151 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--~- 201 (316)
T cd05619 151 --------------------------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--E- 201 (316)
T ss_pred --------------------------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--H-
Confidence 01122346888999999998899999999999999999999999995322 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR-HIS 703 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 703 (714)
.+..+...... +..... ....+.+++.+||+.||++||++. ++.
T Consensus 202 --~~~~~~i~~~~--------~~~~~~-----~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 202 --EELFQSIRMDN--------PCYPRW-----LTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred --HHHHHHHHhCC--------CCCCcc-----CCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 11122111111 111111 122577899999999999999997 554
No 84
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.3e-38 Score=325.76 Aligned_cols=254 Identities=24% Similarity=0.407 Sum_probs=199.2
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|...+ +..||||.+...... ..+.|.+|++++++++||||+++++++...+..++||||+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 90 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYM 90 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecC
Confidence 479999999999998643 478999999875444 4568999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCC--------CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 482 PNGSLATALHGKPG--------MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 482 ~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
++|+|.+++..... ......+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~kl~d~g 167 (280)
T cd05049 91 EHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFG 167 (280)
T ss_pred CCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeEEECCcc
Confidence 99999999975431 1112458899999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-C
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G 632 (714)
+++....... ........++..|+|||++.+..++.++|||||||++|||++ |
T Consensus 168 ~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g 221 (280)
T cd05049 168 MSRDVYTTDY--------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYG 221 (280)
T ss_pred cceecccCcc--------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcC
Confidence 9875422110 000112223567999999999999999999999999999999 9
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
+.||..... ....... . ... .. .... .....+.+++.+||+.||++|||+.||++.|++
T Consensus 222 ~~p~~~~~~--~~~~~~~---~-~~~-~~-----~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 222 KQPWYGLSN--EEVIECI---T-QGR-LL-----QRPR-----TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCCCCCCCH--HHHHHHH---H-cCC-cC-----CCCC-----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 999853322 1122111 1 111 00 0000 122368899999999999999999999999863
No 85
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.6e-38 Score=321.62 Aligned_cols=249 Identities=25% Similarity=0.435 Sum_probs=199.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|.+.+++.||+|.++.... ..+++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLE 90 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHH
Confidence 57999999999999988888999999876543 34678999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++....+ ..+++..+.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.......
T Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~----- 158 (261)
T cd05068 91 YLQGGAG----RALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY----- 158 (261)
T ss_pred HHhccCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-----
Confidence 9976532 358999999999999999999999 8999999999999999999999999999986542110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........+..|+|||++.+..++.++||||||+++|||+| |+.||.... .....
T Consensus 159 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~ 214 (261)
T cd05068 159 ----------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--NAEVL 214 (261)
T ss_pred ----------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHH
Confidence 00011112346999999998899999999999999999999 998884321 11111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
. ........ + .. ......+.+++.+||+.+|++||++.++++.|+++
T Consensus 215 ---~-~~~~~~~~-----~-~~-----~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 215 ---Q-QVDQGYRM-----P-CP-----PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---H-HHHcCCCC-----C-CC-----CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 1 11111110 0 00 11234688999999999999999999999999864
No 86
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.6e-38 Score=332.65 Aligned_cols=192 Identities=28% Similarity=0.355 Sum_probs=166.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||++.+. ++..+|+|.+.... ......+.+|++++++++||||++++++|...+..++||||+++|+|
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 90 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcH
Confidence 47999999999999986 48889999887643 23346789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 91 ~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----- 157 (333)
T cd06650 91 DQVLKKA------GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 157 (333)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----
Confidence 9999754 3578899999999999999999972 36999999999999999999999999998754321
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 -------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 01123467889999999988899999999999999999999999953
No 87
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9e-38 Score=321.55 Aligned_cols=252 Identities=28% Similarity=0.472 Sum_probs=199.6
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|.++. ...||||.++... .....+|.+|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 88 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME 88 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCC
Confidence 3579999999999999753 4589999987653 3334678999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+++|.+++.... ..+++.++.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 89 NGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999997653 358999999999999999999999 899999999999999999999999999998764111
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. ........++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 161 ~--------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 161 A--------------------------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred c--------------------------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 0 000111223567999999998899999999999999999998 9999843221
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
..+ .... ...... +. . ......+.+++.+||+.+|++||+++||++.|+++.
T Consensus 215 --~~~---~~~~-~~~~~~-----~~-~-----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 215 --QDV---IKAV-EDGYRL-----PP-P-----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred --HHH---HHHH-HcCCCC-----CC-C-----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 111 1111 111110 10 0 112346889999999999999999999999999863
No 88
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-38 Score=351.26 Aligned_cols=249 Identities=22% Similarity=0.240 Sum_probs=197.0
Q ss_pred cccccccCceEEEEEEECC--CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLED--GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||.||+|.... +..||+|++..........+.+|++++++++|||||++++++...+..|+||||+++|+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~ 151 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGD 151 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCC
Confidence 3579999999999998643 57888888766555555678899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.++++..... ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 152 L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-- 224 (478)
T PTZ00267 152 LNKQIKQRLKE--HLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-- 224 (478)
T ss_pred HHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc--
Confidence 99988643111 1458899999999999999999999 8999999999999999999999999999986532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 225 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~----- 275 (478)
T PTZ00267 225 ------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS----- 275 (478)
T ss_pred ------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----
Confidence 011223457899999999999899999999999999999999999994321
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+.+........ ++ ... .....+.+++.+||..||++||++++++.
T Consensus 276 ~~~~~~~~~~~~~------~~-~~~-----~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 276 QREIMQQVLYGKY------DP-FPC-----PVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHHhCCC------CC-CCc-----cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1222222222111 11 000 11235789999999999999999999864
No 89
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-38 Score=333.00 Aligned_cols=258 Identities=21% Similarity=0.320 Sum_probs=190.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+. ++|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l 89 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDL 89 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCH
Confidence 47999999999999986 589999999876432 223467889999999999999999999999999999999995 688
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 90 ~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 157 (303)
T cd07869 90 CQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---- 157 (303)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC----
Confidence 88886543 358889999999999999999999 899999999999999999999999999987432110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 158 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 213 (303)
T cd07869 158 ------------------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQ 213 (303)
T ss_pred ------------------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH
Confidence 11122346888999999865 45799999999999999999999999543221111
Q ss_pred hHHHHHHHHhhcC--Cccc-----ccCCCCCC---CCCcH------HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK--PLAD-----VLDPYLAP---DADKE------EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~--~~~~-----~~d~~~~~---~~~~~------~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+ ..+........ .... ..++.... ..... .....+.+++.+||+.||++|||++|+++
T Consensus 214 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 214 L-ERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred H-HHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 1 11111110000 0000 00000000 00000 01235779999999999999999999875
No 90
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.1e-38 Score=334.89 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=191.4
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||+||+|+++. ++.||||++++. .......+.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 69999999999999864 789999999754 223345677899999888 7999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 149 (318)
T cd05570 82 DLMFHIQRS------GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--- 149 (318)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---
Confidence 999988755 458999999999999999999999 89999999999999999999999999998642111
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 150 -------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~--~- 201 (318)
T cd05570 150 -------------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD--E- 201 (318)
T ss_pred -------------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC--H-
Confidence 001122346888999999999999999999999999999999999994321 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM-----RHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~ 704 (714)
............ ..... ....+.+++.+||+.||++|||+ .++++
T Consensus 202 --~~~~~~i~~~~~--------~~~~~-----~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 202 --DELFQSILEDEV--------RYPRW-----LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred --HHHHHHHHcCCC--------CCCCc-----CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 112222111111 11111 12357899999999999999999 76654
No 91
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-38 Score=340.51 Aligned_cols=253 Identities=20% Similarity=0.234 Sum_probs=189.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||++... +++.||+|+... ..+.+|++++++++||||+++++++......++|||++. ++|.
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~ 170 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLY 170 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHH
Confidence 47999999999999975 588999997542 456889999999999999999999999999999999995 6899
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
.++... ..+++.+++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+......
T Consensus 171 ~~l~~~------~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~----- 236 (391)
T PHA03212 171 CYLAAK------RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN----- 236 (391)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-----
Confidence 888654 458899999999999999999999 899999999999999999999999999987532110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc--h
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM--D 645 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~--~ 645 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||........ +
T Consensus 237 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~ 294 (391)
T PHA03212 237 ----------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCD 294 (391)
T ss_pred ----------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCc
Confidence 0112234579999999999998999999999999999999999988753321110 0
Q ss_pred hHHHHHHHHhhcCC------------cccc---------cCCCCCCCC-CcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 646 LVNWMQLCIEEKKP------------LADV---------LDPYLAPDA-DKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 646 l~~~~~~~~~~~~~------------~~~~---------~d~~~~~~~-~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
....+......... +.+. ..+...+.. ........+.+++.+||+.||++|||++|++
T Consensus 295 ~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 295 SDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred hhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 00001111100000 0000 000000000 0112234688999999999999999999998
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 375 ~ 375 (391)
T PHA03212 375 D 375 (391)
T ss_pred c
Confidence 4
No 92
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=9.7e-38 Score=319.41 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=196.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
..||+|+||.||+|.+.++..+|+|.+..... ..+.|.+|+.++++++||||+++++++...+..++||||+++|+|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~ 88 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN 88 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHH
Confidence 46999999999999988777899999875433 34679999999999999999999999998888999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++.++++++.||+.||+|||+ .+++|+||||+||++++++.+||+|||.++......
T Consensus 89 ~i~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~------ 154 (256)
T cd05113 89 YLREHG-----KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE------ 154 (256)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCc------
Confidence 997543 358999999999999999999999 899999999999999999999999999987543210
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+
T Consensus 155 ---------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~-- 209 (256)
T cd05113 155 ---------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SE-- 209 (256)
T ss_pred ---------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HH--
Confidence 001111224567999999988889999999999999999999 9999843221 11
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.......... +.... .....+.+++.+||+.+|++|||+.++++.|+
T Consensus 210 -~~~~~~~~~~-------~~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 210 -TVEKVSQGLR-------LYRPH-----LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -HHHHHhcCCC-------CCCCC-----CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1111111111 00011 11246889999999999999999999998874
No 93
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.8e-38 Score=338.04 Aligned_cols=241 Identities=23% Similarity=0.340 Sum_probs=186.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++|+||+++++++...+..++||||+++|+|
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 159 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL 159 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcc
Confidence 47999999999999975 589999999875433 3346789999999999999999999999999999999999999998
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+. ...++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 160 ~~~----------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---- 222 (353)
T PLN00034 160 EGT----------HIADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---- 222 (353)
T ss_pred ccc----------ccCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc----
Confidence 653 225567788999999999999999 899999999999999999999999999987653210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||.....
T Consensus 223 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 278 (353)
T PLN00034 223 ------------------------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ 278 (353)
T ss_pred ------------------------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 01123357889999998743 2345789999999999999999999952211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+....+........ +.... ....++.+++.+||+.||++|||+.|+++
T Consensus 279 --~~~~~~~~~~~~~~~-------~~~~~-----~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 279 --GDWASLMCAICMSQP-------PEAPA-----TASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred --ccHHHHHHHHhccCC-------CCCCC-----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111111100 11111 12236889999999999999999999986
No 94
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-39 Score=333.69 Aligned_cols=245 Identities=23% Similarity=0.336 Sum_probs=204.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc-eeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE-KLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lV~e~~~~g 484 (714)
+++|+|+||.++.++++ +++.+|+|++.... ....+...+|+.++++++|||||.+.+.+..++. .+|||+|++||
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg 89 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGG 89 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCC
Confidence 37999999999999875 47899999987643 3334578899999999999999999999999888 89999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
++.+.+.+.++ ..++++++.+|+.|++.|+.|||+ ++|+|||||+.||+++.+..+||+|||+|+.+....
T Consensus 90 ~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-- 160 (426)
T KOG0589|consen 90 DLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-- 160 (426)
T ss_pred CHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch--
Confidence 99999988764 458999999999999999999998 899999999999999999999999999999875431
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
....+.+||+.||.||.+.+.+|+.|+||||+||++|||.+-+++|.. .
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a-----~ 209 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA-----S 209 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc-----c
Confidence 133456789999999999999999999999999999999999999942 2
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
+....+....+.. ++|.- .....++..++..|+..+|+.||++.+++.+
T Consensus 210 ~m~~Li~ki~~~~------~~Plp------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 210 NMSELILKINRGL------YSPLP------SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred chHHHHHHHhhcc------CCCCC------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2333333333322 12211 1233468899999999999999999999876
No 95
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.6e-38 Score=323.80 Aligned_cols=255 Identities=18% Similarity=0.284 Sum_probs=200.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +++.||||.+... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 87 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAG 87 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCC
Confidence 47999999999999975 5899999987643 2333457889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++...... ...+++..+.+++.|++.||+|||+ ++++|+||||+||+++.++.++|+|||+++......
T Consensus 88 ~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-- 160 (267)
T cd08228 88 DLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-- 160 (267)
T ss_pred cHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccchh--
Confidence 999988643211 1347889999999999999999999 899999999999999999999999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-- 212 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-- 212 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc--
Confidence 0011234577899999998888999999999999999999999998543222
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
...+........ .+... .......+.+++.+||+.+|++||++++|++.|+++.
T Consensus 213 -~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 213 -LFSLCQKIEQCD-------YPPLP----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -HHHHHHHHhcCC-------CCCCC----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 222222111111 11111 1123346889999999999999999999999999874
No 96
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9.4e-38 Score=318.65 Aligned_cols=248 Identities=22% Similarity=0.341 Sum_probs=194.4
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.||+|+||.||+|... +++.||+|.+.... ......|.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 6999999999999975 68999999887543 233467999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~---- 149 (252)
T cd05084 82 TFLRTEG-----PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY---- 149 (252)
T ss_pred HHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccc----
Confidence 9997542 358899999999999999999999 8999999999999999999999999999875321100
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
.........+..|+|||.+.+..++.++||||||+++|||++ |..||..... ..
T Consensus 150 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--~~- 204 (252)
T cd05084 150 ----------------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--QQ- 204 (252)
T ss_pred ----------------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--HH-
Confidence 000011112446999999998889999999999999999998 8888843211 11
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.......... .... ......+.+++.+||+.+|++|||+.++.++|++
T Consensus 205 ---~~~~~~~~~~------~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 205 ---TREAIEQGVR------LPCP-----ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ---HHHHHHcCCC------CCCc-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1111111110 0111 1123368899999999999999999999999863
No 97
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-38 Score=336.71 Aligned_cols=236 Identities=25% Similarity=0.336 Sum_probs=186.8
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHH-HHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVE-AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||+||+|+.. +|+.||+|++.... ....+.+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 6999999999999986 58999999987532 222344555655 467899999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--- 149 (323)
T cd05575 82 ELFFHLQRE------RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--- 149 (323)
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---
Confidence 999998754 458899999999999999999999 89999999999999999999999999998743211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~----- 199 (323)
T cd05575 150 -------------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR----- 199 (323)
T ss_pred -------------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----
Confidence 01112335788999999999999999999999999999999999999532
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
+..+........... ..+.. ...+.+++.+||+.||++||++.
T Consensus 200 ~~~~~~~~i~~~~~~--------~~~~~-----~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 200 DTAEMYDNILNKPLR--------LKPNI-----SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CHHHHHHHHHcCCCC--------CCCCC-----CHHHHHHHHHHhhcCHHhCCCCC
Confidence 122222222221111 11111 23578999999999999999985
No 98
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.5e-38 Score=325.82 Aligned_cols=247 Identities=24% Similarity=0.255 Sum_probs=191.4
Q ss_pred ccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||.||+++.+ +|+.||+|++.... ....+.+..|++++++++||||+++++++....+.++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999975 48999999986532 12234566799999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 149 (277)
T cd05607 81 KYHIYNVGE----RGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---- 149 (277)
T ss_pred HHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----
Confidence 988865432 358899999999999999999999 899999999999999999999999999987543210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ...
T Consensus 150 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~ 203 (277)
T cd05607 150 -------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAK 203 (277)
T ss_pred -------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhH
Confidence 011234678899999999888999999999999999999999999432211 111
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
............ .. .. .....++.+++.+||+.||++||+++|+++.+
T Consensus 204 ~~~~~~~~~~~~------~~--~~----~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 204 EELKRRTLEDEV------KF--EH----QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHhhcccc------cc--cc----ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 111111111110 00 00 01223578999999999999999998766443
No 99
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=320.80 Aligned_cols=247 Identities=22% Similarity=0.296 Sum_probs=189.3
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc--------------hhHHHHHHHHHHHhccCCCCccceEEEEEeC--C
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--------------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--D 472 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~ 472 (714)
.||+|.||.|-+|+.. +++.||||++.+... ...+...+||.+|++++|||||+++.+..+. +
T Consensus 104 eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~ 183 (576)
T KOG0585|consen 104 EIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESD 183 (576)
T ss_pred hhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccC
Confidence 6999999999999965 589999999976311 1135788999999999999999999998764 5
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
..|||+|||..|.+...=... ..+++.++++|++++..||+|||. ++||||||||+|+|++++|++||+||
T Consensus 184 ~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 184 KLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred ceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcEEeecc
Confidence 789999999988765432211 238999999999999999999999 89999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC----CCchhhhHHHHHHHHH
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK----PSQKWDIYSYGVILLE 628 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DVwS~Gvvl~e 628 (714)
|.+......... ..........||+.|+|||...++. .+.+.||||+||+||-
T Consensus 255 GVs~~~~~~~~~-----------------------~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYC 311 (576)
T KOG0585|consen 255 GVSNEFPQGSDE-----------------------GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYC 311 (576)
T ss_pred ceeeecccCCcc-----------------------ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHH
Confidence 998765322100 0011122357899999999997733 3678999999999999
Q ss_pred HHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 629 MITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 629 lltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|+.|+.||... ...+....++.+.-.+ +. ..+....+.+++.++|++||++|.+..+|..
T Consensus 312 llfG~~PF~~~-----~~~~l~~KIvn~pL~f---------P~--~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 312 LLFGQLPFFDD-----FELELFDKIVNDPLEF---------PE--NPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred hhhccCCcccc-----hHHHHHHHHhcCcccC---------CC--cccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 99999999422 2233333333322111 11 1123446789999999999999999988754
No 100
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.2e-38 Score=328.17 Aligned_cols=258 Identities=25% Similarity=0.408 Sum_probs=196.7
Q ss_pred ccccccCceEEEEEEEC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-----DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~ 481 (714)
+.||+|+||.||++..+ ++..||+|++........+.|.+|++++++++||||+++++++... ...++||||+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 89 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYL 89 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEec
Confidence 47999999999999853 4789999999877666667899999999999999999999987643 4678999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 90 ~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 90 PYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred CCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 9999999997543 358999999999999999999999 89999999999999999999999999999865322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
... ........++..|+|||++.+..++.++|||||||++|||++|..|+.....
T Consensus 162 ~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~ 216 (284)
T cd05081 162 KEY-------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA 216 (284)
T ss_pred Ccc-------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch
Confidence 110 0001111234569999999988899999999999999999998877532211
Q ss_pred Ccc----------hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 642 SEM----------DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 642 ~~~----------~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
... .....+......... ... .......+.+++.+||+.+|++|||+.||++.|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 217 EFMRMMGNDKQGQMIVYHLIELLKNNGR--------LPA---PPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hhhhhcccccccccchHHHHHHHhcCCc--------CCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 000 000000011111100 000 0112336889999999999999999999999999863
No 101
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.6e-37 Score=322.00 Aligned_cols=253 Identities=25% Similarity=0.364 Sum_probs=195.6
Q ss_pred ccccccCceEEEEEEECC-Cc----EEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-GH----TLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.+.. ++ .+++|.+..... ....++..|+..+++++||||+++++++. ....++++||++
T Consensus 13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~ 91 (279)
T cd05111 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSP 91 (279)
T ss_pred cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCC
Confidence 579999999999999743 44 478888764432 33467888999999999999999999875 456789999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..|+.||+.||+|||+ ++++||||||+||++++++.+||+|||+++......
T Consensus 92 ~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 92 LGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred CCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 999999997653 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. ........++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 164 ~--------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~- 216 (279)
T cd05111 164 K--------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR- 216 (279)
T ss_pred c--------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 0 001112334667999999998899999999999999999998 999984321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
.....++ ....... ..+.. ....+.+++.+||..||++|||+.|+++.|+.+.+.+
T Consensus 217 -~~~~~~~----~~~~~~~---~~~~~--------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 217 -PHEVPDL----LEKGERL---AQPQI--------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -HHHHHHH----HHCCCcC---CCCCC--------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 1111111 1211111 11111 1235778999999999999999999999999876543
No 102
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.3e-37 Score=321.34 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=194.2
Q ss_pred ccccccCceEEEEEEECCC-c--EEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEE
Q 005102 409 FVLGKSGIGIVYKVVLEDG-H--TLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g-~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV 477 (714)
+.||+|+||.||+|++.+. . .||+|.++.. .....+.+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v 84 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVI 84 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEE
Confidence 5799999999999997653 2 6899988754 234456789999999999999999999987542 246899
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+++|+|.+++...........+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.
T Consensus 85 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 85 LPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 9999999999987533211112458999999999999999999999 8999999999999999999999999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... ........+++.|+|||+..+..++.++||||||+++|||++ |+.||
T Consensus 162 ~~~~~~--------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 215 (272)
T cd05075 162 IYNGDY--------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPY 215 (272)
T ss_pred cCcccc--------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCC
Confidence 532110 000111233567999999998889999999999999999999 78888
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
.... ...+ ... ....... .... .....+.+++.+||+.||++|||+.++++.|+++
T Consensus 216 ~~~~--~~~~---~~~-~~~~~~~------~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 216 PGVE--NSEI---YDY-LRQGNRL------KQPP-----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC--HHHH---HHH-HHcCCCC------CCCC-----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 4321 1111 111 1111110 0011 1223578999999999999999999999999876
No 103
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.2e-38 Score=325.85 Aligned_cols=265 Identities=24% Similarity=0.331 Sum_probs=196.3
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 480 (714)
..||+|+||+||++.+ .+++.||+|.+..... .....|.+|++++++++||||+++++++... ...++||||
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEY 89 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecC
Confidence 4799999999988653 3578999999876532 3346788999999999999999999998754 357899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++... .+++.++..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++....
T Consensus 90 ~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 90 VPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred CCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 9999999998643 48999999999999999999999 8999999999999999999999999999886542
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.... ........++..|+|||.+.+..++.++||||||+++|||+||+.|+....
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 214 (283)
T cd05080 160 GHEY-------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214 (283)
T ss_pred cchh-------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence 1100 000111223556999999988889999999999999999999999984332
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
....+......... ....+.+..+....... ......++.+++.+||+.+|++|||++++++.|+++.
T Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 215 KKFEEMIGPKQGQM-TVVRLIELLERGMRLPC-PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred chhhhhhccccccc-chhhhhhhhhcCCCCCC-CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 21111110000000 00000111111110000 0112347889999999999999999999999999875
No 104
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-37 Score=318.64 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=194.4
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE---DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||+|.++ ++..||+|++..... ...+.|.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 356799999876533 23467999999999999999999999885 457899999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++.++++++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++........
T Consensus 81 L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~- 151 (257)
T cd05115 81 LNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY- 151 (257)
T ss_pred HHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccc-
Confidence 999987543 458999999999999999999999 89999999999999999999999999998754322110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~ 644 (714)
........++..|+|||.+.+..++.++|||||||++||+++ |+.||..... .
T Consensus 152 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~ 205 (257)
T cd05115 152 ------------------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--P 205 (257)
T ss_pred ------------------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--H
Confidence 000111123467999999988889999999999999999997 9999953321 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.+.. .+..... +.... ....++.+++.+||..||++||++.+|.+.|+.+.
T Consensus 206 ---~~~~-~~~~~~~------~~~~~-----~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 206 ---EVMS-FIEQGKR------LDCPA-----ECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred ---HHHH-HHHCCCC------CCCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 1111 1111111 11111 12346889999999999999999999999998763
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.6e-38 Score=332.14 Aligned_cols=240 Identities=23% Similarity=0.304 Sum_probs=187.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHH---hccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAI---GKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
..||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++ ++++||||+++++++...+..|+||||+
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~ 84 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYA 84 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCC
Confidence 47999999999999975 58999999997542 22334566676655 5678999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|..+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 85 ~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 85 AGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred CCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 99999988754 348999999999999999999999 89999999999999999999999999998642211
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 155 ----------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~- 205 (324)
T cd05589 155 ----------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD- 205 (324)
T ss_pred ----------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-
Confidence 011123457889999999999899999999999999999999999994321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
. .+.......... ..... ....+.+++.+||+.||++||+ +.++++
T Consensus 206 -~---~~~~~~i~~~~~--------~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 206 -E---EEVFDSIVNDEV--------RYPRF-----LSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -H---HHHHHHHHhCCC--------CCCCC-----CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1 122222222111 11111 1235779999999999999994 555543
No 106
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-37 Score=316.64 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=194.0
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE---DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|.++ ++..+|+|+++... ....+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 47899999987543 233567899999999999999999999885 45678999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 81 PLNKFLQKN------KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 999999654 358899999999999999999999 89999999999999999999999999998765322110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~ 643 (714)
........++..|+|||.+....++.++|||||||++|||+| |+.||.... .
T Consensus 152 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~ 204 (257)
T cd05116 152 -------------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--G 204 (257)
T ss_pred -------------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--H
Confidence 001111223567999999988889999999999999999998 999994321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
.. +.... ..... +..+.. ....+.+++.+||+.||++||++++|.+.|++.
T Consensus 205 ~~---~~~~i-~~~~~------~~~~~~-----~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 205 NE---VTQMI-ESGER------MECPQR-----CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HH---HHHHH-HCCCC------CCCCCC-----CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11 22211 11111 111111 223578999999999999999999999999864
No 107
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.4e-38 Score=333.52 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=198.3
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeC-CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSV-DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~~~~lV~e 479 (714)
++||+|+||.||+|... +++.||+|+++... ....+.+.+|++++.++ +|+||++++++|... ...+++||
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~e 92 (337)
T cd05054 13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 92 (337)
T ss_pred cccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEe
Confidence 58999999999999742 25789999987543 23345688899999999 899999999988754 56789999
Q ss_pred ccCCCCHhhhhhCCCCCC-------------------------------------------------------CcCCCCH
Q 005102 480 YIPNGSLATALHGKPGMV-------------------------------------------------------SFTPVPW 504 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~-------------------------------------------------------~~~~l~~ 504 (714)
|+++|+|.+++....... ....++|
T Consensus 93 y~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (337)
T cd05054 93 YCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTL 172 (337)
T ss_pred cCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCH
Confidence 999999999986432100 0126899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhccc
Q 005102 505 SVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKS 584 (714)
Q Consensus 505 ~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (714)
..+.+++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 173 ~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~--------------------- 228 (337)
T cd05054 173 EDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--------------------- 228 (337)
T ss_pred HHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc---------------------
Confidence 9999999999999999999 8999999999999999999999999999986532110
Q ss_pred ccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccc
Q 005102 585 VSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV 663 (714)
Q Consensus 585 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 663 (714)
........++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .+.. .......
T Consensus 229 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~----~~~~~~~---- 294 (337)
T cd05054 229 -----YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCR----RLKEGTR---- 294 (337)
T ss_pred -----hhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHH----HHhccCC----
Confidence 011122334667999999999999999999999999999998 999985322111 1111 1111110
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 664 LDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 664 ~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+... .....++.+++.+||+.+|++||++.|+++.|++++..
T Consensus 295 --~~~~-----~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 295 --MRAP-----EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred --CCCC-----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0011 11223688999999999999999999999999998754
No 108
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.3e-38 Score=326.16 Aligned_cols=259 Identities=25% Similarity=0.365 Sum_probs=200.2
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|+... ...+|+|.+..... ....++.+|+.++++++||||+++++++...+..++||||+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYA 85 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEec
Confidence 479999999999998632 35789998876533 33467899999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCC------------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC
Q 005102 482 PNGSLATALHGKPGM------------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~ 543 (714)
.+|+|.+++...... .....+++..+..++.|++.||+|||+ .+|+||||||+||++++
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~nill~~ 162 (290)
T cd05045 86 KYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAE 162 (290)
T ss_pred CCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheEEEcC
Confidence 999999998643210 112458899999999999999999999 89999999999999999
Q ss_pred CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHH
Q 005102 544 NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623 (714)
Q Consensus 544 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~G 623 (714)
++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||
T Consensus 163 ~~~~kl~dfg~~~~~~~~~~~--------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 216 (290)
T cd05045 163 GRKMKISDFGLSRDVYEEDSY--------------------------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFG 216 (290)
T ss_pred CCcEEeccccccccccCccch--------------------------hcccCCCCCccccCHHHHccCCcchHhHHHHHH
Confidence 999999999998754321110 001112235679999999888899999999999
Q ss_pred HHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 624 VILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 624 vvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
+++|||+| |+.||... ....+.++. ..... ..... .....+.+++.+||+.+|++||++.++
T Consensus 217 ~~l~el~t~g~~p~~~~--~~~~~~~~~----~~~~~------~~~~~-----~~~~~~~~~i~~cl~~~P~~Rp~~~~i 279 (290)
T cd05045 217 VLLWEIVTLGGNPYPGI--APERLFNLL----KTGYR------MERPE-----NCSEEMYNLMLTCWKQEPDKRPTFADI 279 (290)
T ss_pred HHHHHHHhcCCCCCCCC--CHHHHHHHH----hCCCC------CCCCC-----CCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 99999999 99998432 112222211 11110 10111 122368899999999999999999999
Q ss_pred HHHHhhhhccC
Q 005102 703 SDALDRLIVSS 713 (714)
Q Consensus 703 l~~L~~i~~~~ 713 (714)
++.|+++..++
T Consensus 280 ~~~l~~~~~~~ 290 (290)
T cd05045 280 SKELEKMMVKS 290 (290)
T ss_pred HHHHHHHHhcC
Confidence 99999987653
No 109
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.2e-38 Score=334.25 Aligned_cols=246 Identities=22% Similarity=0.249 Sum_probs=191.0
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCC----CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEG----GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
+.||+|+||.||+++.. +++.||+|++.+. .....+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILD 85 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEe
Confidence 47999999999999863 5789999998753 222345688899999999 59999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~~~g~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 86 YVSGGEMFTHLYQR------DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999998754 458899999999999999999999 899999999999999999999999999987542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
... ........||+.|+|||++.+.. ++.++|||||||++|||+||+.||..
T Consensus 157 ~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 157 SEE---------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred ccC---------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 211 00112345789999999997654 78899999999999999999999953
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
..... ............ ++..... ....+.+++.+||+.||++|| +++++++
T Consensus 210 ~~~~~-~~~~~~~~~~~~--------~~~~~~~-----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 210 EGERN-TQSEVSRRILKC--------DPPFPSF-----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCC-CHHHHHHHHhcC--------CCCCCCC-----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 32211 111111111111 1111111 122577899999999999999 6667654
No 110
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.6e-38 Score=319.45 Aligned_cols=246 Identities=23% Similarity=0.384 Sum_probs=195.3
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||++.++++..+|+|.+..... ....|.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 88 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLN 88 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHH
Confidence 47999999999999988788999999875433 23578899999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 89 ~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~----- 155 (256)
T cd05059 89 YLRERK-----GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY----- 155 (256)
T ss_pred HHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccc-----
Confidence 997543 358899999999999999999999 8999999999999999999999999999875432100
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..
T Consensus 156 ----------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~ 211 (256)
T cd05059 156 ----------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVV 211 (256)
T ss_pred ----------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHH
Confidence 00111122456999999998899999999999999999999 7888843211 1111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
. .. .... ....... ...++.+++.+||..+|++|||+.|+++.|.
T Consensus 212 ~---~~-~~~~------~~~~~~~-----~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 212 E---SV-SAGY------RLYRPKL-----APTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred H---HH-HcCC------cCCCCCC-----CCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1 11 1111 1111111 2336889999999999999999999998863
No 111
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.7e-37 Score=320.49 Aligned_cols=255 Identities=21% Similarity=0.353 Sum_probs=196.9
Q ss_pred ccccccCceEEEEEEECC----CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc------eeE
Q 005102 409 FVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE------KLL 476 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~l 476 (714)
+.||+|+||.||+|.+.. +..||+|+++... ......+.+|++.+++++||||+++++++...+. .++
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMV 84 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEE
Confidence 479999999999998753 3689999987542 2334678999999999999999999999876554 789
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
||||+++|+|..++...........+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++
T Consensus 85 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 85 ILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred EEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCcccee
Confidence 99999999999998654322222468999999999999999999999 899999999999999999999999999998
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p 635 (714)
........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 162 ~~~~~~~~--------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p 215 (273)
T cd05035 162 KIYSGDYY--------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215 (273)
T ss_pred eccccccc--------------------------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCC
Confidence 65322110 00011123456999999988889999999999999999999 8888
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
|.... ...+.+++ .. ... +.... .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus 216 ~~~~~--~~~~~~~~---~~-~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 216 YPGVE--NHEIYDYL---RH-GNR------LKQPE-----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCC--HHHHHHHH---Hc-CCC------CCCCc-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 84322 11222211 11 111 11111 1234688999999999999999999999999886
No 112
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.4e-37 Score=315.18 Aligned_cols=246 Identities=26% Similarity=0.370 Sum_probs=195.8
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+||+|+||.||+|...++..||+|.+...... ....+.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 69999999999999888999999998765433 23468899999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.|++.||.|+|+ ++++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------ 147 (250)
T cd05085 82 FLRKKK-----DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI------ 147 (250)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccc------
Confidence 987543 347899999999999999999999 899999999999999999999999999986432110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||++.+..++.++||||||+++||+++ |..||..... .
T Consensus 148 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~-----~ 201 (250)
T cd05085 148 ---------------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN-----Q 201 (250)
T ss_pred ---------------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH-----H
Confidence 000111123456999999998889999999999999999999 9999843211 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.... ....... ..... .....+.+++.+||..+|++||++.|+++.|.
T Consensus 202 ~~~~-~~~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 202 QARE-QVEKGYR------MSCPQ-----KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHH-HHHcCCC------CCCCC-----CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1111 1111110 01111 12246889999999999999999999999875
No 113
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.4e-37 Score=336.75 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=199.4
Q ss_pred cccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.||+|++++ +..||+|+++.... ...+.+.+|++++.++. ||||+++++++...+..++|||
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E 121 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITE 121 (401)
T ss_pred hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEe
Confidence 4689999999999998642 46899999986532 22357889999999997 9999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCC---------------------------------------------------------------
Q 005102 480 YIPNGSLATALHGKPGM--------------------------------------------------------------- 496 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~--------------------------------------------------------------- 496 (714)
|+++|+|.++++.....
T Consensus 122 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (401)
T cd05107 122 YCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKY 201 (401)
T ss_pred ccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhh
Confidence 99999999999754210
Q ss_pred -----------------------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 497 -----------------------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 497 -----------------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
.....+++..+++|+.|++.||+|||+ ++|+||||||+|||+++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 202 ADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeCCCEE
Confidence 011347888899999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|
T Consensus 279 kL~DfGla~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~ 332 (401)
T cd05107 279 KICDFGLARDIMRDSN--------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLW 332 (401)
T ss_pred EEEecCcceecccccc--------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHH
Confidence 9999999975432110 00111223467799999998888999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||++ |+.||......+ ........... +..... ...++.+++.+||..+|++||+++||++.|
T Consensus 333 e~l~~g~~P~~~~~~~~-----~~~~~~~~~~~------~~~p~~-----~~~~l~~li~~cl~~~P~~RPs~~ell~~L 396 (401)
T cd05107 333 EIFTLGGTPYPELPMNE-----QFYNAIKRGYR------MAKPAH-----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLV 396 (401)
T ss_pred HHHHcCCCCCCCCCchH-----HHHHHHHcCCC------CCCCCC-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 9998 888984332111 11111111111 111111 123688999999999999999999999999
Q ss_pred hhhh
Q 005102 707 DRLI 710 (714)
Q Consensus 707 ~~i~ 710 (714)
++++
T Consensus 397 ~~~~ 400 (401)
T cd05107 397 GDLL 400 (401)
T ss_pred HHHh
Confidence 9876
No 114
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.8e-38 Score=332.00 Aligned_cols=236 Identities=21% Similarity=0.279 Sum_probs=186.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCC-CCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRH-SNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|+..+ ++.||||++... .....+.+..|++++..++| ++|+++++++...+..|+||||+++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 85 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 85 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCC
Confidence 479999999999999764 789999998753 22334678889999999976 4688899999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 86 g~L~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-- 154 (324)
T cd05587 86 GDLMYHIQQV------GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-- 154 (324)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC--
Confidence 9999998754 458899999999999999999999 89999999999999999999999999998642111
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||.... .
T Consensus 155 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--~ 206 (324)
T cd05587 155 --------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--E 206 (324)
T ss_pred --------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--H
Confidence 001123357889999999999999999999999999999999999994321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
. +.......... ..... ....+.+++.+||..||++|++.
T Consensus 207 ~---~~~~~i~~~~~--------~~~~~-----~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 207 D---ELFQSIMEHNV--------SYPKS-----LSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred H---HHHHHHHcCCC--------CCCCC-----CCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 11222211111 11111 12357799999999999999986
No 115
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.7e-37 Score=323.11 Aligned_cols=261 Identities=23% Similarity=0.302 Sum_probs=194.9
Q ss_pred ccccccCceEEEEEEECC---------------CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCC
Q 005102 409 FVLGKSGIGIVYKVVLED---------------GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD 472 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 472 (714)
+.||+|+||.||+++.++ ...||+|+++... ......|.+|++++++++|+||+++++++...+
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 90 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD 90 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC
Confidence 479999999999988643 2358999987653 333467999999999999999999999999999
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCC------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGM------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME 546 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~ 546 (714)
..++||||+++++|.+++...... .....+++..+++++.|++.||+|||+ .+++||||||+||++++++.
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nill~~~~~ 167 (295)
T cd05097 91 PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCLVGNHYT 167 (295)
T ss_pred ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEEEcCCCc
Confidence 999999999999999998653210 011247899999999999999999999 89999999999999999999
Q ss_pred eEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHH
Q 005102 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626 (714)
Q Consensus 547 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl 626 (714)
+||+|||+++....... ........++..|+|||++.+..++.++|||||||++
T Consensus 168 ~kl~dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l 221 (295)
T cd05097 168 IKIADFGMSRNLYSGDY--------------------------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL 221 (295)
T ss_pred EEecccccccccccCcc--------------------------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHH
Confidence 99999999875432110 0111222345679999999888899999999999999
Q ss_pred HHHHh--CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 627 LEMIT--GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 627 ~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|||++ |..||.... ................. ..... ..+. ....+.+++.+||+.||++|||+++|++
T Consensus 222 ~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~--~~~~~-~~~~-----~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 222 WEMFTLCKEQPYSLLS--DEQVIENTGEFFRNQGR--QIYLS-QTPL-----CPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHcCCCCCCcccC--hHHHHHHHHHhhhhccc--cccCC-CCCC-----CCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99998 556663221 12222211111111100 00000 0001 1236889999999999999999999999
Q ss_pred HHhh
Q 005102 705 ALDR 708 (714)
Q Consensus 705 ~L~~ 708 (714)
.|++
T Consensus 292 ~l~~ 295 (295)
T cd05097 292 FLRE 295 (295)
T ss_pred HHhC
Confidence 9864
No 116
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1e-37 Score=332.89 Aligned_cols=259 Identities=19% Similarity=0.300 Sum_probs=189.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC-----ceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-----EKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lV~e~ 480 (714)
+.||+|+||.||+|+.. +|+.||||++... .......+.+|++++++++||||+++++++...+ ..|+||||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~ 85 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFEL 85 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEec
Confidence 47999999999999975 5899999998753 2233456889999999999999999999886432 47999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+. ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~-~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 86 ME-SDLHQVIKAN------DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred CC-CCHHHHHHhc------ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 95 6999988654 458999999999999999999999 8999999999999999999999999999975432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 156 ~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 156 DTPT-------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ccCc-------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 1100 011123457889999999865 6789999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcC-------------CcccccCCCCCCCCC--cHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKK-------------PLADVLDPYLAPDAD--KEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
... ......+........ .....+.+....... .......+.+++.+||+.||++|||++|++
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 211 KNV--VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred CCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence 221 111111111000000 000000000000000 001123577999999999999999999998
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 289 ~ 289 (338)
T cd07859 289 A 289 (338)
T ss_pred c
Confidence 5
No 117
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.8e-37 Score=320.65 Aligned_cols=239 Identities=22% Similarity=0.314 Sum_probs=186.1
Q ss_pred cccccCceEEEEEEECC-------------------------CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccce
Q 005102 410 VLGKSGIGIVYKVVLED-------------------------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTL 464 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 464 (714)
.||+|+||.||+|.+.. ...||+|++..........|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997521 13589998876544445678899999999999999999
Q ss_pred EEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC
Q 005102 465 RAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544 (714)
Q Consensus 465 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~ 544 (714)
++++......++||||+++|+|..++.... ..+++..+++++.|+++||+|||+ ++|+||||||+||++++.
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEecc
Confidence 999999999999999999999999986543 458899999999999999999999 899999999999999764
Q ss_pred C-------CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCch
Q 005102 545 M-------EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQK 616 (714)
Q Consensus 545 ~-------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~ 616 (714)
+ .+|++|||++...... ....++..|+|||.+.+ ..++.+
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~--------------------------------~~~~~~~~~~aPe~~~~~~~~~~~ 201 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR--------------------------------EERVERIPWIAPECVPGGNSLSTA 201 (274)
T ss_pred CcccCccceeeecCCccccccccc--------------------------------cccccCCcccCchhhcCCCCCCcH
Confidence 3 3799999987532110 11124667999998865 568999
Q ss_pred hhhHHHHHHHHHHH-hCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC
Q 005102 617 WDIYSYGVILLEMI-TGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK 695 (714)
Q Consensus 617 ~DVwS~Gvvl~ell-tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~ 695 (714)
+|||||||++|||+ +|+.||......+ ...+ ...... .... ....+.+++.+||+.+|++
T Consensus 202 ~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~----~~~~~~--------~~~~-----~~~~~~~li~~cl~~~p~~ 262 (274)
T cd05076 202 ADKWSFGTTLLEICFDGEVPLKERTPSE--KERF----YEKKHR--------LPEP-----SCKELATLISQCLTYEPTQ 262 (274)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccChHH--HHHH----HHhccC--------CCCC-----CChHHHHHHHHHcccChhh
Confidence 99999999999994 6999985332211 1111 111111 1111 1125789999999999999
Q ss_pred CCCHHHHHHHHh
Q 005102 696 RPTMRHISDALD 707 (714)
Q Consensus 696 RPt~~evl~~L~ 707 (714)
|||+.+|++.|.
T Consensus 263 Rps~~~il~~L~ 274 (274)
T cd05076 263 RPSFRTILRDLT 274 (274)
T ss_pred CcCHHHHHHhhC
Confidence 999999998873
No 118
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.9e-37 Score=316.00 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=192.9
Q ss_pred cccccCceEEEEEEECC----CcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEeccCC
Q 005102 410 VLGKSGIGIVYKVVLED----GHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYDYIPN 483 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~~~~ 483 (714)
.||+|+||.||+|.+.+ +..||+|++... .....+.+.+|+.+++.++||||+++++++.. .+..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 68999999999998642 457999998653 33345678899999999999999999998764 4567899999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++.......
T Consensus 82 ~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 82 GDLRNFIRSET-----HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999997543 346788889999999999999999 8999999999999999999999999999875432110
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCC-ccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT-AVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~-p~~~~~~~ 642 (714)
.. ........++..|+|||.+.+..++.++|||||||++|||++|.. ||...
T Consensus 154 ~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--- 206 (262)
T cd05058 154 YS------------------------VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--- 206 (262)
T ss_pred ee------------------------ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC---
Confidence 00 001112234567999999988899999999999999999999654 55321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
+..+.......... +... . .....+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 207 --~~~~~~~~~~~~~~-------~~~~-~----~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 207 --DSFDITVYLLQGRR-------LLQP-E----YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred --CHHHHHHHHhcCCC-------CCCC-C----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 11122222111111 0000 0 112368899999999999999999999999998864
No 119
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.1e-38 Score=334.81 Aligned_cols=241 Identities=22% Similarity=0.303 Sum_probs=188.7
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHH-HHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVE-AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||+||+|+.. +|+.||+|++... .....+.+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 6999999999999975 5899999998754 2223345566665 467789999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|..++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--- 149 (325)
T cd05604 82 ELFFHLQRE------RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--- 149 (325)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---
Confidence 999988654 458999999999999999999999 89999999999999999999999999998642110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~---- 200 (325)
T cd05604 150 -------------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD---- 200 (325)
T ss_pred -------------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC----
Confidence 011123457889999999999999999999999999999999999995321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..+.......... ...+. ....+.+++.+|++.+|.+||++++.++.
T Consensus 201 -~~~~~~~~~~~~~--------~~~~~-----~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 201 -VAEMYDNILHKPL--------VLRPG-----ASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred -HHHHHHHHHcCCc--------cCCCC-----CCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 1122222222111 11111 12357789999999999999998644433
No 120
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.5e-37 Score=324.76 Aligned_cols=258 Identities=24% Similarity=0.379 Sum_probs=199.9
Q ss_pred cccccccCceEEEEEEECC------CcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLED------GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.||++...+ ...+|+|.+.... .....++.+|+++++++ +|+||+++++++...+..++|||
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 3579999999999998743 3689999987643 23345688999999999 89999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCC----------CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEE
Q 005102 480 YIPNGSLATALHGKPG----------MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 549 (714)
|+++|+|.++++.... ......+++..+++++.|++.||+|||+ .+|+||||||+||++++++.+||
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~~~~~kL 173 (293)
T cd05053 97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKI 173 (293)
T ss_pred eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcCCCeEEe
Confidence 9999999999965321 0112468999999999999999999999 89999999999999999999999
Q ss_pred cccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHH
Q 005102 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 550 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~el 629 (714)
+|||+++.+..... ........++..|+|||.+.+..++.++|||||||++|||
T Consensus 174 ~Dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (293)
T cd05053 174 ADFGLARDIHHIDY--------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 227 (293)
T ss_pred Cccccccccccccc--------------------------eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHH
Confidence 99999986542210 0011112235679999999888899999999999999999
Q ss_pred Hh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 630 IT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 630 lt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
++ |..||..... .+. ... ...... +.... .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 228 ~~~g~~p~~~~~~--~~~---~~~-~~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 228 FTLGGSPYPGIPV--EEL---FKL-LKEGYR------MEKPQ-----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred hcCCCCCCCCCCH--HHH---HHH-HHcCCc------CCCCC-----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 98 9999843211 111 111 111110 00110 123368899999999999999999999999998
Q ss_pred hhc
Q 005102 709 LIV 711 (714)
Q Consensus 709 i~~ 711 (714)
+++
T Consensus 291 ~~~ 293 (293)
T cd05053 291 MLT 293 (293)
T ss_pred hhC
Confidence 863
No 121
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.9e-38 Score=331.80 Aligned_cols=242 Identities=20% Similarity=0.294 Sum_probs=190.4
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||+||+|+... ++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 69999999999999754 7899999998642 23345688999999988 6999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--- 149 (327)
T cd05617 82 DLMFHMQRQ------RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--- 149 (327)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---
Confidence 999988654 458999999999999999999999 89999999999999999999999999998742111
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC-c
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS-E 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~-~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~ 204 (327)
T cd05617 150 -------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD 204 (327)
T ss_pred -------------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc
Confidence 01112345788999999999999999999999999999999999999532221 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
....++......... ...+.. ....+.+++.+||+.||++|+++.
T Consensus 205 ~~~~~~~~~~~~~~~-------~~~p~~-----~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 205 MNTEDYLFQVILEKP-------IRIPRF-----LSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred cccHHHHHHHHHhCC-------CCCCCC-----CCHHHHHHHHHHhccCHHHcCCCC
Confidence 122222222222211 011111 113577999999999999999853
No 122
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.5e-38 Score=332.91 Aligned_cols=241 Identities=23% Similarity=0.261 Sum_probs=187.4
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHH-HHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVE-AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||+||+|+... ++.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 69999999999999764 7889999987532 122234455544 467889999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--- 149 (325)
T cd05602 82 ELFYHLQRE------RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--- 149 (325)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---
Confidence 999998754 347788899999999999999999 89999999999999999999999999998743211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---- 200 (325)
T cd05602 150 -------------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---- 200 (325)
T ss_pred -------------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC----
Confidence 011223457889999999999999999999999999999999999995321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..+........... ..+ . ....+.+++.+||+.||.+||++.+.+..
T Consensus 201 -~~~~~~~i~~~~~~----~~~----~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 201 -TAEMYDNILNKPLQ----LKP----N-----ITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred -HHHHHHHHHhCCcC----CCC----C-----CCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 11222222221111 111 1 12257789999999999999998754433
No 123
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1e-37 Score=320.28 Aligned_cols=238 Identities=21% Similarity=0.297 Sum_probs=186.3
Q ss_pred cccccCceEEEEEEECC-------------CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeE
Q 005102 410 VLGKSGIGIVYKVVLED-------------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLL 476 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 476 (714)
.||+|+||.||+|...+ ...||+|.+..........|..|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 58999999999998532 23589998876555555678899999999999999999999999999999
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC-------eEE
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME-------PHV 549 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-------~kl 549 (714)
||||+++|+|..++.... ..+++..+.+++.||+.||+|||+ ++|+||||||+|||++.++. +|+
T Consensus 82 v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999886543 358999999999999999999999 89999999999999987654 899
Q ss_pred cccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-CCCCCchhhhHHHHHHHHH
Q 005102 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 550 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DVwS~Gvvl~e 628 (714)
+|||++..... .....++..|+|||.+. +..++.++|||||||++||
T Consensus 154 ~d~g~~~~~~~--------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~e 201 (262)
T cd05077 154 SDPGIPITVLS--------------------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWE 201 (262)
T ss_pred CCCCCCccccC--------------------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHH
Confidence 99998864321 11123467799999986 4668999999999999999
Q ss_pred HH-hCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 629 MI-TGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 629 ll-tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
|+ +|+.||..... .+.. ...... .....+ ....+.+++.+||+.||++||++.++++.+
T Consensus 202 l~~~~~~p~~~~~~-----~~~~-~~~~~~---~~~~~~----------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 202 ICYNGEIPLKDKTL-----AEKE-RFYEGQ---CMLVTP----------SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHhCCCCCCCCcch-----hHHH-HHHhcC---ccCCCC----------ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 98 58887732211 1110 111110 000010 123578999999999999999999998875
No 124
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.2e-37 Score=320.75 Aligned_cols=254 Identities=21% Similarity=0.344 Sum_probs=195.3
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|.++ .+..||||++..... ....+|.+|+.++++++||||+++++++...+..++||||+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 91 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 91 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecC
Confidence 57999999999999864 256799999865432 33457899999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCC----CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 482 PNGSLATALHGKPGMV----SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
++|+|.+++....... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~ 168 (277)
T cd05062 92 TRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 168 (277)
T ss_pred CCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEECCCCCccc
Confidence 9999999986532210 01346788999999999999999999 8999999999999999999999999999875
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... ........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 169 ~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~ 222 (277)
T cd05062 169 IYETDY--------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 222 (277)
T ss_pred cCCcce--------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 432110 000111233567999999998889999999999999999999 68888
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.... .. ........... .. ... .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 223 ~~~~--~~---~~~~~~~~~~~--~~-----~~~-----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 223 QGMS--NE---QVLRFVMEGGL--LD-----KPD-----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCCC--HH---HHHHHHHcCCc--CC-----CCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 4321 11 11211111111 00 011 122368899999999999999999999999874
No 125
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-37 Score=337.08 Aligned_cols=273 Identities=21% Similarity=0.255 Sum_probs=193.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg 86 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG 86 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence 47999999999999875 48899999997642 233457889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++++||+|||+++........
T Consensus 87 ~L~~~l~~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 87 DMMSLLIRM------EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999998765 458889999999999999999999 89999999999999999999999999998754321111
Q ss_pred CCccCCCCCCCCchhh-------------------hcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 565 PTLQSNRMPAEKPQER-------------------QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
................ .................||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0000000000000000 000000000011124568999999999998889999999999999
Q ss_pred HHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhH--ccCCCCCCCCCHHHHH
Q 005102 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMA--CVHSSPEKRPTMRHIS 703 (714)
Q Consensus 626 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~--Cl~~dP~~RPt~~evl 703 (714)
+|||+||+.||......+ ........... ........ ...++.+++.+ |+..+|..||+++|++
T Consensus 238 l~elltG~~Pf~~~~~~~-----~~~~i~~~~~~------~~~~~~~~---~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTE-----TQLKVINWENT------LHIPPQVK---LSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHhCCCCCcCCCHHH-----HHHHHHccccc------cCCCCCCC---CCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 999999999995432111 11111111100 00111100 12246677777 6666777799999997
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 304 ~ 304 (381)
T cd05626 304 A 304 (381)
T ss_pred c
Confidence 5
No 126
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.6e-38 Score=332.27 Aligned_cols=236 Identities=22% Similarity=0.309 Sum_probs=185.5
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHH-HHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVE-AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||.||+|+.. +++.||+|++.+.. ......+.+|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999986 48899999987532 222344556654 578899999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|..++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--- 149 (321)
T cd05603 82 ELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--- 149 (321)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---
Confidence 999888654 457888999999999999999999 89999999999999999999999999998742111
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 150 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~----- 199 (321)
T cd05603 150 -------------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR----- 199 (321)
T ss_pred -------------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----
Confidence 01112335788999999999888999999999999999999999999432
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
+............. ..... ....+.+++.+||+.||++||++.
T Consensus 200 ~~~~~~~~i~~~~~--------~~~~~-----~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 200 DVSQMYDNILHKPL--------QLPGG-----KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CHHHHHHHHhcCCC--------CCCCC-----CCHHHHHHHHHHccCCHhhcCCCC
Confidence 11222222221110 11111 123578999999999999999864
No 127
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.2e-37 Score=316.36 Aligned_cols=247 Identities=25% Similarity=0.421 Sum_probs=195.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|..+++..||+|.+...... .+.|.+|+.++++++|+||+++++++. .+..++||||+++++|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 89 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 89 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC-HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHH
Confidence 479999999999999988889999999765432 367999999999999999999999875 456899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
+++.... ..+++.++.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~----- 157 (260)
T cd05070 90 FLKDGEG----RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY----- 157 (260)
T ss_pred HHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-----
Confidence 9976432 358999999999999999999999 8999999999999999999999999999976432110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 158 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~--- 210 (260)
T cd05070 158 ----------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NR--- 210 (260)
T ss_pred ----------------------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HH---
Confidence 00111123456999999988889999999999999999999 888884321 11
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
+....... ... +... ......+.+++.+||+.+|++|||++++.+.|+.
T Consensus 211 ~~~~~~~~-~~~------~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 EVLEQVER-GYR------MPCP-----QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHc-CCC------CCCC-----CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111111 110 0011 1123468899999999999999999999999875
No 128
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.6e-37 Score=319.84 Aligned_cols=255 Identities=20% Similarity=0.310 Sum_probs=201.4
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++.. .+++.+|||.+.... .....++.+|+++++.++||||+++++++...+..+++|||++++
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 87 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 87 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCC
Confidence 3799999999999996 468999999886532 233467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++...... ...+++..+..++.|++.||+|||+ ++++|+||||+||+++.++.++|+|||+++......
T Consensus 88 ~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd08229 88 DLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-- 160 (267)
T ss_pred CHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC--
Confidence 999988642211 1458999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+..++.++||||||+++|||++|..||.....
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--- 211 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--- 211 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---
Confidence 011123457789999999888899999999999999999999999853221
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
+...+.+.... ...+.... ......+.+++.+||+.||++||||.+|++.++++.
T Consensus 212 ~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 212 NLYSLCKKIEQ-------CDYPPLPS----DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred hHHHHhhhhhc-------CCCCCCCc----ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 11122111111 11111111 123346889999999999999999999999998875
No 129
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=310.46 Aligned_cols=271 Identities=25% Similarity=0.299 Sum_probs=205.7
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|.-|+||++++++ +..+|+|++.+.. .....+.+.|-+||+.++||.++.+|+.++..+..|+|||||+||+
T Consensus 84 ~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGd 163 (459)
T KOG0610|consen 84 RLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGD 163 (459)
T ss_pred HcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCcc
Confidence 79999999999999876 5899999998763 3345678889999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|..+.+.+++ +.+++..++-++.+|+-||+|||- .|||.|||||+||||.++|++.|+||-++..........
T Consensus 164 L~~LrqkQp~----~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~ 236 (459)
T KOG0610|consen 164 LHSLRQKQPG----KRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV 236 (459)
T ss_pred HHHHHhhCCC----CccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence 9999988765 569999999999999999999999 899999999999999999999999999987652211000
Q ss_pred Cc------------c-------CCCCCCC-Cc----hhhhccc----ccceeecccCCCCCCccccCCcccCCCCCCchh
Q 005102 566 TL------------Q-------SNRMPAE-KP----QERQQKS----VSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW 617 (714)
Q Consensus 566 ~~------------~-------~~~~~~~-~~----~~~~~~~----~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~ 617 (714)
.. . ..+.... +. ......+ ............+||-.|.|||++.|...+.++
T Consensus 237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV 316 (459)
T KOG0610|consen 237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV 316 (459)
T ss_pred ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence 00 0 0000000 00 0000000 012233445678999999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 618 DIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 618 DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
|.|+|||++|||+.|+.||...... ..+.+.+ ... ...+... .....+.+||++.|.+||.+|.
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv----~~~--------l~Fp~~~---~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIV----GQP--------LKFPEEP---EVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHh----cCC--------CcCCCCC---cchhHHHHHHHHHhccChhhhh
Confidence 9999999999999999999544332 2222222 111 1111111 3445788999999999999998
Q ss_pred C----HHHHH
Q 005102 698 T----MRHIS 703 (714)
Q Consensus 698 t----~~evl 703 (714)
. ++||.
T Consensus 381 g~~rGA~eIK 390 (459)
T KOG0610|consen 381 GSKRGAAEIK 390 (459)
T ss_pred ccccchHHhh
Confidence 7 66653
No 130
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.1e-37 Score=318.16 Aligned_cols=255 Identities=21% Similarity=0.305 Sum_probs=190.9
Q ss_pred cccccCceEEEEEEECC---CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLED---GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998654 46799999876543 334578899999999999999999999999889999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++...... .....++..+.+++.|++.||+|||+ .+++||||||+||++++++++||+|||+++.......
T Consensus 82 L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 82 LKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred HHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 99999754321 11346778889999999999999999 8999999999999999999999999999864321100
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-------CCCchhhhHHHHHHHHHHHh-CCCccc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-------KPSQKWDIYSYGVILLEMIT-GRTAVV 637 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~~~DVwS~Gvvl~ellt-G~~p~~ 637 (714)
........++..|+|||++.+. .++.++||||||+++|||++ |+.||.
T Consensus 156 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 211 (269)
T cd05087 156 ------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR 211 (269)
T ss_pred ------------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 0111223456779999998642 35889999999999999996 999995
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
..... +.... ..... .....++..... ....+.+++.+|| .+|++|||++||+..|+
T Consensus 212 ~~~~~--~~~~~---~~~~~--~~~~~~~~~~~~-----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 212 HLSDE--QVLTY---TVREQ--QLKLPKPRLKLP-----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCChH--HHHHH---Hhhcc--cCCCCCCccCCC-----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 43221 11111 11111 111222222211 1225778999999 68999999999999875
No 131
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.9e-37 Score=320.87 Aligned_cols=254 Identities=25% Similarity=0.400 Sum_probs=196.4
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.. .++..||+|.+..... .....|.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 90 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLN 90 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCC
Confidence 4799999999999985 2468899999975433 334678999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCC-----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcc
Q 005102 483 NGSLATALHGKPGM-----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551 (714)
Q Consensus 483 ~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 551 (714)
+|+|.+++...... .....+++.+++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~~kl~d 167 (283)
T cd05090 91 QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISD 167 (283)
T ss_pred CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCcEEecc
Confidence 99999998633210 001347899999999999999999999 8999999999999999999999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
||+++....... ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 168 fg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~ 221 (283)
T cd05090 168 LGLSREIYSADY--------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221 (283)
T ss_pred ccccccccCCcc--------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHc
Confidence 999976532110 001112223567999999988889999999999999999999
Q ss_pred -CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 632 -GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 632 -G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
|..||.... ...+.+.+ ...... .... ....++.+++.+||+.||++||++.+|.+.|.+
T Consensus 222 ~g~~p~~~~~--~~~~~~~~----~~~~~~------~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 222 FGLQPYYGFS--NQEVIEMV----RKRQLL------PCSE-----DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCCCCCC--HHHHHHHH----HcCCcC------CCCC-----CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 988984321 11111111 111110 0111 112367889999999999999999999998864
No 132
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-37 Score=324.44 Aligned_cols=257 Identities=23% Similarity=0.313 Sum_probs=187.0
Q ss_pred ccccccCceEEEEEEEC--CCcEEEEEEeCCCC--chhHHHHHHHHHHHhcc---CCCCccceEEEEEe-----CCceeE
Q 005102 409 FVLGKSGIGIVYKVVLE--DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKI---RHSNIVTLRAYYWS-----VDEKLL 476 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~~~~~l 476 (714)
+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+++++++ +||||++++++|.. ....++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~l 86 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 86 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEE
Confidence 47999999999999873 36889999987532 22234567788777766 69999999999863 345789
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
||||+. ++|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++
T Consensus 87 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 87 VFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred EEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 999996 699999875432 358999999999999999999999 899999999999999999999999999987
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||
T Consensus 159 ~~~~~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f 209 (290)
T cd07862 159 IYSFQ-----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 209 (290)
T ss_pred eccCC-----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCc
Confidence 54311 0112334688899999998888999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhh----cCC----c-ccccCCCCCCCCC--cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEE----KKP----L-ADVLDPYLAPDAD--KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~----~~~----~-~~~~d~~~~~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... ..+....+...... ..+ . .....+....... .......+.+++.+||+.||++|||+.|+++
T Consensus 210 ~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 210 RGSS--DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCCC--HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 5332 22222211111100 000 0 0000000000000 0011235679999999999999999999874
No 133
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.5e-37 Score=315.64 Aligned_cols=249 Identities=27% Similarity=0.416 Sum_probs=196.4
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|.+.+...||+|++..... ..+.|.+|++++++++||||+++++++. .+..++||||+++|+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 89 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 89 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHH
Confidence 47999999999999987777899999976433 3467899999999999999999999874 456899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++..... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.++.......
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~----- 157 (262)
T cd05071 90 FLKGEMG----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY----- 157 (262)
T ss_pred HHhhccc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccc-----
Confidence 9975432 357899999999999999999999 8999999999999999999999999999876532110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||+..+..++.++||||||+++|||+| |+.||......
T Consensus 158 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~----- 210 (262)
T cd05071 158 ----------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----- 210 (262)
T ss_pred ----------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----
Confidence 00112234567999999988899999999999999999999 78888432211
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
+.... ...... ... .......+.+++.+||+.||++||++.++++.|++..
T Consensus 211 ~~~~~-~~~~~~------~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 211 EVLDQ-VERGYR------MPC-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred HHHHH-HhcCCC------CCC-----ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 11111 111110 000 1123346889999999999999999999999999764
No 134
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3e-37 Score=315.96 Aligned_cols=249 Identities=27% Similarity=0.395 Sum_probs=195.9
Q ss_pred cccccCceEEEEEEECC----CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED----GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|.+.. +..+|+|.+..... ...+++.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 69999999999998643 26899999886544 24467899999999999999999999876 45689999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 81 PLLKYLKKR------REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred cHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 999999765 358899999999999999999999 89999999999999999999999999998865322110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~ 643 (714)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .
T Consensus 152 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~ 204 (257)
T cd05060 152 -------------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--G 204 (257)
T ss_pred -------------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--H
Confidence 000111123456999999998899999999999999999998 999984332 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.++..++ ...... ... ......+.+++.+||..+|++|||+.++++.|+++.
T Consensus 205 ~~~~~~~----~~~~~~------~~~-----~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 205 AEVIAML----ESGERL------PRP-----EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHH----HcCCcC------CCC-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 2222222 111110 000 112236889999999999999999999999999874
No 135
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.3e-37 Score=317.64 Aligned_cols=253 Identities=28% Similarity=0.475 Sum_probs=198.6
Q ss_pred cccccccCceEEEEEEECC-C---cEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED-G---HTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|+.+. + ..+|+|++.... ....+.+..|++++++++||||+++++++...+..++||||++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME 89 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence 4589999999999999753 3 379999987653 3345678999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+++|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++.......
T Consensus 90 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 90 NGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 999999997543 358999999999999999999999 899999999999999999999999999987553211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. .........+..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 162 ~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~ 216 (268)
T cd05063 162 EG-------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN 216 (268)
T ss_pred cc-------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence 00 000111122456999999988889999999999999999998 9999943221
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.++..... ..... +.. .....++.+++.+||+.+|++||++.+|++.|++++
T Consensus 217 -----~~~~~~i~-~~~~~-----~~~------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 217 -----HEVMKAIN-DGFRL-----PAP------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred -----HHHHHHHh-cCCCC-----CCC------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 12222211 11110 100 112346889999999999999999999999999864
No 136
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=300.54 Aligned_cols=244 Identities=25% Similarity=0.376 Sum_probs=196.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-----c---hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-----S---QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 478 (714)
+++|+|..+.|-++.++ +|+++|+|++.... + .-.+.-.+|+.+|+++ .||+|+.+.++|++....++|+
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVF 102 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVF 102 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhh
Confidence 57999999999998765 58999999986431 1 1134567899999999 6999999999999999999999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
|.|+.|.|+++|... ..+++++..+|++|+..|++|||. +.||||||||+|||+|++.++||+|||+|+.+
T Consensus 103 dl~prGELFDyLts~------VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 103 DLMPRGELFDYLTSK------VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred hhcccchHHHHhhhh------eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeecc
Confidence 999999999999876 569999999999999999999999 99999999999999999999999999999876
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC------CCCCchhhhHHHHHHHHHHHhC
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV------VKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~~DVwS~Gvvl~elltG 632 (714)
...+ .....+||++|.|||.+.- ..|+..+|+||.|||||.|+.|
T Consensus 174 ~~Ge-----------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG 224 (411)
T KOG0599|consen 174 EPGE-----------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG 224 (411)
T ss_pred CCch-----------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence 5432 2344578999999999842 3478899999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+||..... .-.++.....+. ++-.| ...+......+++.+||+.||.+|.|++|+++
T Consensus 225 cpPFwHRkQ-----mlMLR~ImeGky---qF~sp------eWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 225 CPPFWHRKQ-----MLMLRMIMEGKY---QFRSP------EWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred CCchhHHHH-----HHHHHHHHhccc---ccCCc------chhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 999943210 111112222221 12222 22334456789999999999999999999875
No 137
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-37 Score=323.56 Aligned_cols=259 Identities=24% Similarity=0.376 Sum_probs=200.7
Q ss_pred cccccccCceEEEEEEEC--------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLE--------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 477 (714)
...||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++...+..++|
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 99 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 99 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEE
Confidence 458999999999999742 24579999987542 33456789999999999 899999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 478 YDYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|||+++|+|.+++...... .....+++.++.+++.||+.||+|||+ ++|+||||||+||++++++.+
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~~~~~~ 176 (304)
T cd05101 100 VEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVTENNVM 176 (304)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEcCCCcE
Confidence 9999999999999764221 011358899999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........++..|+|||++.+..++.++||||||+++|
T Consensus 177 kl~D~g~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 230 (304)
T cd05101 177 KIADFGLARDVNNIDY--------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 230 (304)
T ss_pred EECCCccceecccccc--------------------------cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHH
Confidence 9999999986532110 00111223456799999998888999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||++ |..||... ...++.... ...... ... ......+.+++.+||+.+|++|||+.|+++.|
T Consensus 231 el~~~g~~p~~~~-----~~~~~~~~~-~~~~~~------~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 231 EIFTLGGSPYPGI-----PVEELFKLL-KEGHRM------DKP-----ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred HHHcCCCCCcccC-----CHHHHHHHH-HcCCcC------CCC-----CCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 9999 77887322 122222222 111110 000 11234688999999999999999999999999
Q ss_pred hhhhcc
Q 005102 707 DRLIVS 712 (714)
Q Consensus 707 ~~i~~~ 712 (714)
+++...
T Consensus 294 ~~~~~~ 299 (304)
T cd05101 294 DRILTL 299 (304)
T ss_pred HHHHHh
Confidence 998753
No 138
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.5e-37 Score=316.31 Aligned_cols=255 Identities=20% Similarity=0.325 Sum_probs=202.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAG 87 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCC
Confidence 47999999999999987 6899999988642 2233567899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++...... ...+++.++.+++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++.......
T Consensus 88 ~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~- 161 (267)
T cd08224 88 DLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT- 161 (267)
T ss_pred CHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc-
Confidence 999998643211 1458899999999999999999999 8999999999999999999999999999875432110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......++..|+|||.+.+..++.++|||||||++|||++|+.||.... .
T Consensus 162 ---------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~ 211 (267)
T cd08224 162 ---------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---M 211 (267)
T ss_pred ---------------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---c
Confidence 0112235777999999998889999999999999999999999984332 2
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
+..+......... . +... .......+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 212 ~~~~~~~~~~~~~------~-~~~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 212 NLYSLCKKIEKCD------Y-PPLP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cHHHHHhhhhcCC------C-CCCC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 2222222111110 0 1011 1123346889999999999999999999999999875
No 139
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.1e-37 Score=317.42 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=195.1
Q ss_pred cccccCceEEEEEEECC-Cc--EEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GH--TLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+||+|+||.||+|.+++ +. .+|+|.+.... ....+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 68999999999999864 43 57888887543 33446789999999999 7999999999999999999999999999
Q ss_pred CHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 485 SLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 485 sL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
+|.+++...... .....+++.+++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 999999754210 111358899999999999999999999 8999999999999999999999999998
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GR 633 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~ 633 (714)
++..... ........+..|+|||++....++.++|||||||++|||++ |.
T Consensus 159 ~~~~~~~-----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~ 209 (270)
T cd05047 159 SRGQEVY-----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 209 (270)
T ss_pred ccccchh-----------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 7532110 00011122456999999988889999999999999999997 99
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.||.... ..+..... ...... .... .....+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 210 ~pf~~~~-----~~~~~~~~-~~~~~~------~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 210 TPYCGMT-----CAELYEKL-PQGYRL------EKPL-----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCccccC-----HHHHHHHH-hCCCCC------CCCC-----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 9984321 11112111 111100 0110 12235789999999999999999999999999875
No 140
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3e-37 Score=320.71 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=196.4
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|...+ ++.||+|++...... ..+.+.+|+.++.+++||||+++++++...+..++++||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYC 90 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcC
Confidence 369999999999998642 578999999865433 2456889999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCC----------CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcc
Q 005102 482 PNGSLATALHGKPG----------MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551 (714)
Q Consensus 482 ~~gsL~~~l~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 551 (714)
++++|.+++..... ......+++..+.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|
T Consensus 91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~kl~D 167 (283)
T cd05091 91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCceEecc
Confidence 99999999853211 0011358899999999999999999999 8999999999999999999999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 168 fg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 221 (283)
T cd05091 168 LGLFREVYAADY--------------------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221 (283)
T ss_pred cccccccccchh--------------------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHc
Confidence 999875432110 011122234667999999988889999999999999999998
Q ss_pred -CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 632 -GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 632 -G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
|..||.... . .++......... . + ... .....+.+++.+||+.+|++||++++|+..|+.
T Consensus 222 ~g~~p~~~~~--~---~~~~~~i~~~~~--~----~-~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 222 YGLQPYCGYS--N---QDVIEMIRNRQV--L----P-CPD-----DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCCCCCCC--H---HHHHHHHHcCCc--C----C-CCC-----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 888874321 1 122222221111 0 0 111 123358899999999999999999999999874
No 141
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=345.96 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=194.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC--------ceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--------EKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------~~~lV 477 (714)
+.||+|+||+||+|+.. +|+.||||++... .......+.+|+..+..++|+||+++++.+...+ ..++|
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV 117 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALV 117 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEE
Confidence 47999999999999864 5899999998754 2334567889999999999999999988775432 25799
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+++|+|.++++..... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 118 ~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 118 LDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred EeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 9999999999998754321 1468899999999999999999999 8999999999999999999999999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 193 ~~~~~~--------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~ 246 (496)
T PTZ00283 193 YAATVS--------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246 (496)
T ss_pred cccccc--------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 532110 011223457899999999999999999999999999999999999994
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. ...+.+........ ++ +... ...++.+++.+||+.||++||++.++++
T Consensus 247 ~~-----~~~~~~~~~~~~~~------~~-~~~~-----~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 247 GE-----NMEEVMHKTLAGRY------DP-LPPS-----ISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CC-----CHHHHHHHHhcCCC------CC-CCCC-----CCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 22 22233332222111 11 1111 2236889999999999999999999876
No 142
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-37 Score=323.02 Aligned_cols=246 Identities=24% Similarity=0.230 Sum_probs=192.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
++||+|+||+||++... +++.||+|++..... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCC
Confidence 47999999999999975 589999999875422 22345788999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++......
T Consensus 86 ~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05605 86 DLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-- 156 (285)
T ss_pred cHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC--
Confidence 99988865421 358999999999999999999999 899999999999999999999999999987542110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......|+..|+|||++.+..++.++||||+||++|||++|+.||..... .
T Consensus 157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~--~ 207 (285)
T cd05605 157 ---------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE--K 207 (285)
T ss_pred ---------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch--h
Confidence 01123467889999999988899999999999999999999999953221 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
...+.+...+.... .... ......+.+++.+||+.||++|| +++++++
T Consensus 208 ~~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 208 VKREEVERRVKEDQ-------EEYS-----EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hHHHHHHHHhhhcc-------cccC-----cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 11111111111110 0011 11223578999999999999999 7778754
No 143
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.1e-38 Score=333.08 Aligned_cols=254 Identities=23% Similarity=0.355 Sum_probs=195.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CC-----CccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HS-----NIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~lV~e~~ 481 (714)
++||+|+||.|-||++. +++.||||+++.... ...+...|+.+|..++ |. |+|++++||...++.|||+|.+
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL 270 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL 270 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence 48999999999999965 599999999987533 3456788999999997 43 8999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC--CCeEEcccchhhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN--MEPHVSDFGLARLAN 559 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~ 559 (714)
.. +|+++++.+.- ..++...++.|+.||+.||.+||+ .+|||+||||+||||.+- ..+||+|||.|.+..
T Consensus 271 ~~-NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 271 ST-NLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred hh-hHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 55 99999987743 669999999999999999999999 899999999999999653 479999999998754
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
... ....-+++|+|||++.|.+|+.+.||||||||+.||++|.+.|.
T Consensus 343 q~v-------------------------------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp-- 389 (586)
T KOG0667|consen 343 QRV-------------------------------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP-- 389 (586)
T ss_pred Ccc-------------------------------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC--
Confidence 211 12233678999999999999999999999999999999987773
Q ss_pred CCCcchhHHHHHHHHh--------hcCCcccccCC--------------------------------CCCC-CCC-----
Q 005102 640 GSSEMDLVNWMQLCIE--------EKKPLADVLDP--------------------------------YLAP-DAD----- 673 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~--------~~~~~~~~~d~--------------------------------~~~~-~~~----- 673 (714)
+.++.+....+...+. ........++. ...+ ...
T Consensus 390 G~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~ 469 (586)
T KOG0667|consen 390 GDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESG 469 (586)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchh
Confidence 3344443332221111 00000001111 0011 000
Q ss_pred -cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 674 -KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 674 -~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+-..+.+++.+|+++||.+|+|..++++
T Consensus 470 ~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 470 LPKADDKLFIDFLKRCLEWDPAERITPAQALN 501 (586)
T ss_pred cccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0123446899999999999999999998874
No 144
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-37 Score=323.80 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=197.3
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 480 (714)
+.||+|+||.||++.+ .++..||+|.++... ......+.+|++++++++||||+++++++... ...++||||
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 89 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEc
Confidence 4799999999999984 247899999987553 33346799999999999999999999998875 567899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++++|.+++.... ..+++..+..++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++....
T Consensus 90 ~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 90 LPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred cCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 99999999986542 358999999999999999999999 9999999999999999999999999999886532
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.... ........++..|+|||++.+..++.++|||||||++|||+|++.|.....
T Consensus 162 ~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~ 216 (284)
T cd05079 162 DKEY-------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM 216 (284)
T ss_pred Cccc-------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc
Confidence 2110 001122345667999999988889999999999999999999887653211
Q ss_pred C----------CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 641 S----------SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 641 ~----------~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
. .......++.. ....... + ... .....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~-~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 217 TLFLKMIGPTHGQMTVTRLVRV-LEEGKRL-----P-RPP-----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred chhhhhcccccccccHHHHHHH-HHcCccC-----C-CCC-----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 1 01111111111 1111100 0 011 12346889999999999999999999999999873
No 145
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-37 Score=330.00 Aligned_cols=236 Identities=21% Similarity=0.282 Sum_probs=187.3
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|+... ++.||||++.+.. ....+.+..|..++..+ +|++|+++++++...+..++||||+++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 85 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNG 85 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCC
Confidence 479999999999999764 7899999987642 22334567788888877 589999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 86 g~L~~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-- 154 (323)
T cd05616 86 GDLMYQIQQV------GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-- 154 (323)
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC--
Confidence 9999988654 458899999999999999999999 89999999999999999999999999998743211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||.... .
T Consensus 155 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--~ 206 (323)
T cd05616 155 --------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--E 206 (323)
T ss_pred --------------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--H
Confidence 011123457889999999999999999999999999999999999994321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
. ............ .... ...++.+++.+|++.||++|++.
T Consensus 207 ~---~~~~~i~~~~~~--------~p~~-----~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 207 D---ELFQSIMEHNVA--------YPKS-----MSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred H---HHHHHHHhCCCC--------CCCc-----CCHHHHHHHHHHcccCHHhcCCC
Confidence 1 122222221111 1111 12357899999999999999985
No 146
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.6e-37 Score=315.96 Aligned_cols=247 Identities=25% Similarity=0.406 Sum_probs=194.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
..||+|+||.||+|.+.++..+|+|.+..... ..+.+.+|++++++++|||++++++++. .+..++||||+++|+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLD 89 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHH
Confidence 47999999999999988777899998875433 3467899999999999999999999875 456899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~----- 157 (260)
T cd05069 90 FLKEGDG----KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY----- 157 (260)
T ss_pred HHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-----
Confidence 9976432 348899999999999999999999 8999999999999999999999999999976532110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||...+..++.++||||||+++|||+| |+.||.... .....
T Consensus 158 ----------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~ 213 (260)
T cd05069 158 ----------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVL 213 (260)
T ss_pred ----------------------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHH
Confidence 00111223567999999988889999999999999999999 888984321 11111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.++ ..... +... ......+.+++.+||..||++||++++|++.|++
T Consensus 214 ~~~----~~~~~------~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 214 EQV----ERGYR------MPCP-----QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHH----HcCCC------CCCC-----cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111 11110 1011 1123468899999999999999999999999986
No 147
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.6e-37 Score=314.47 Aligned_cols=250 Identities=24% Similarity=0.372 Sum_probs=198.1
Q ss_pred cccccCceEEEEEEECC--C--cEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED--G--HTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|++++++++||||+++++++.. ...++||||+++|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 68999999999999754 2 3699999987655 556789999999999999999999999988 8889999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 81 SLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999976532 358999999999999999999999 89999999999999999999999999999876432110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~ 643 (714)
........++..|+|||++.+..++.++|||||||++|||+| |+.||.... .
T Consensus 154 -------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~ 206 (257)
T cd05040 154 -------------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS--G 206 (257)
T ss_pred -------------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC--H
Confidence 001112335677999999998899999999999999999999 999984321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.+. .......... ...+ ......+.+++.+||+.+|++|||+.++++.|.+
T Consensus 207 ~~~---~~~~~~~~~~---~~~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 207 SQI---LKKIDKEGER---LERP--------EACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred HHH---HHHHHhcCCc---CCCC--------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 111 1111111110 0001 1122468899999999999999999999998853
No 148
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.4e-37 Score=323.31 Aligned_cols=253 Identities=24% Similarity=0.327 Sum_probs=198.1
Q ss_pred cccccccCceEEEEEEEC------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.||++... ++..||||+++... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 119 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence 468999999999999742 25689999987653 23346789999999999 79999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++|+|.++++.... ..+++.++.+++.|++.||+|||+ ++|+|+||||+||++++++.+|++|||+++...
T Consensus 120 ~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 120 YCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred cCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 9999999999975432 238999999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~ 638 (714)
.... ........++..|+|||.+.+..++.++|||||||++|||+| |+.||..
T Consensus 193 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~ 246 (302)
T cd05055 193 NDSN--------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246 (302)
T ss_pred CCCc--------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCC
Confidence 2110 001112234667999999998889999999999999999998 9999843
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
....+ .. ......... +.... ....++.+++.+||+.+|++|||+.|+++.|+++
T Consensus 247 ~~~~~-~~----~~~~~~~~~------~~~~~-----~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 247 MPVDS-KF----YKLIKEGYR------MAQPE-----HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCchH-HH----HHHHHcCCc------CCCCC-----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 32111 11 111111110 00000 1123688999999999999999999999999875
No 149
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.2e-37 Score=319.79 Aligned_cols=252 Identities=26% Similarity=0.386 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEEC-CCc----EEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGH----TLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.+. +++ .||+|+++.... ...+.+.+|+.+++.++||||+++++++.. ...+++|||++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~ 91 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMP 91 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCC
Confidence 47999999999999854 444 489999876433 335678899999999999999999999975 45789999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 92 ~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 92 YGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred CCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 999999997643 358999999999999999999999 899999999999999999999999999998654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. .......++..|+|||...+..++.++|||||||++|||+| |..||....
T Consensus 164 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~- 216 (279)
T cd05109 164 TE--------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP- 216 (279)
T ss_pred ce--------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 10 00111123567999999998899999999999999999998 888884321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
...+..++ ...... .... .....+.+++.+||+.||++||++.++++.|+++...
T Consensus 217 -~~~~~~~~----~~~~~~------~~~~-----~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 217 -AREIPDLL----EKGERL------PQPP-----ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred -HHHHHHHH----HCCCcC------CCCc-----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 11122221 111110 0001 1233678999999999999999999999999988654
No 150
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=334.71 Aligned_cols=246 Identities=28% Similarity=0.412 Sum_probs=202.1
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.-+||+|.||+||.|++.+ ...+|||-+...+....+-...||.+-++++|.|||+++|.+..+++.-+.||-++||+|
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 3589999999999999765 568999999888777777889999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC-CCCCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPV--PWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG-HNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~ 563 (714)
.++|+..-+ ++ .+.+.-.+.+||++||.|||+ ..|||||||-.|||++ -.|.+||+|||-++.+.-
T Consensus 660 SsLLrskWG-----PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--- 728 (1226)
T KOG4279|consen 660 SSLLRSKWG-----PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--- 728 (1226)
T ss_pred HHHHHhccC-----CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhcc---
Confidence 999987653 34 678888999999999999999 8999999999999996 578999999998876531
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC--CCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK--PSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
+...+.++.||.-|||||++..++ |+.++|||||||++.||.||++||...+.
T Consensus 729 -------------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs 783 (1226)
T KOG4279|consen 729 -------------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS 783 (1226)
T ss_pred -------------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC
Confidence 122344566899999999997654 89999999999999999999999976655
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+.+ ..+.. +.|.+ +++...+...++.+|+.+||.+||++.+++.
T Consensus 784 pqAAMFk---VGmyK-------vHP~i-----Peelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 784 PQAAMFK---VGMYK-------VHPPI-----PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred hhHhhhh---hccee-------cCCCC-----cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 4321111 00000 12222 2345567889999999999999999999875
No 151
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-37 Score=325.46 Aligned_cols=200 Identities=24% Similarity=0.376 Sum_probs=159.9
Q ss_pred cccccccCceEEEEEEEC---CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE---DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~~ 482 (714)
+..||+|+||+||+|+.+ +++.||+|.+..... ...+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 457999999999999975 467899999876432 2457889999999999999999999864 345789999995
Q ss_pred CCCHhhhhhCCCCC---CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----CCCCCeEEcccchh
Q 005102 483 NGSLATALHGKPGM---VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLA 555 (714)
Q Consensus 483 ~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla 555 (714)
++|.+++...... .....+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5888887533211 111358899999999999999999999 899999999999999 45678999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
+........ ........||+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~ 214 (317)
T cd07868 160 RLFNSPLKP-------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 214 (317)
T ss_pred eccCCCCcc-------------------------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 865321100 0112234568899999999764 58999999999999999999999
Q ss_pred cccc
Q 005102 635 AVVQ 638 (714)
Q Consensus 635 p~~~ 638 (714)
||..
T Consensus 215 ~f~~ 218 (317)
T cd07868 215 IFHC 218 (317)
T ss_pred CccC
Confidence 9953
No 152
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.5e-37 Score=321.10 Aligned_cols=255 Identities=24% Similarity=0.395 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEECC-C--cEEEEEEeCCC-CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-G--HTLAVRRLGEG-GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+||+|+||.||+|..++ + ..+++|.++.. .....+.|.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 87 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPY 87 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCC
Confidence 479999999999999764 3 35788888753 233446789999999999 799999999999999999999999999
Q ss_pred CCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 484 GSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 484 gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
|+|.+++...... .....+++..+.+|+.|++.||+|||+ ++|+||||||+|||+++++.+||+|||
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg 164 (297)
T cd05089 88 GNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFG 164 (297)
T ss_pred CcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEEECCcC
Confidence 9999999754210 011358899999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-C
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G 632 (714)
++...... ........+..|+|||++.+..++.++|||||||++|||+| |
T Consensus 165 ~~~~~~~~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g 215 (297)
T cd05089 165 LSRGEEVY-----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLG 215 (297)
T ss_pred CCccccce-----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 98632110 00011112346999999988889999999999999999998 9
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+.||.... ..+........ . .+.... .....+.+++.+||+.+|.+|||++++++.|+.+...
T Consensus 216 ~~pf~~~~-----~~~~~~~~~~~-~------~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 216 GTPYCGMT-----CAELYEKLPQG-Y------RMEKPR-----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCCC-----HHHHHHHHhcC-C------CCCCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 99994321 11222211111 0 111111 1223678999999999999999999999999987653
No 153
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.2e-37 Score=318.01 Aligned_cols=254 Identities=28% Similarity=0.481 Sum_probs=198.2
Q ss_pred cccccccCceEEEEEEECC-C---cEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED-G---HTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|.+.. + ..||||.+... .....++|..|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence 4579999999999999753 3 36999998765 33345689999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 89 NGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred CCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999987653 358999999999999999999999 899999999999999999999999999987654321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.... .........+..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 161 ~~~~-----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~- 216 (269)
T cd05065 161 SDPT-----------------------YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS- 216 (269)
T ss_pred cccc-----------------------cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-
Confidence 1000 000011112346999999998899999999999999999887 999984322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
..+...++ ...... + .. .+....+.+++.+||+.+|++||++++|+..|+++
T Consensus 217 -~~~~~~~i----~~~~~~-----~-~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 217 -NQDVINAI----EQDYRL-----P-PP-----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -HHHHHHHH----HcCCcC-----C-Cc-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11222222 111110 0 00 11223578999999999999999999999999876
No 154
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-37 Score=317.85 Aligned_cols=247 Identities=25% Similarity=0.315 Sum_probs=193.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~ 94 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQ 94 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHH
Confidence 47999999999999974 58899999997655445567889999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
++++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 95 ~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~----- 160 (267)
T cd06646 95 DIYHVT------GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI----- 160 (267)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc-----
Confidence 998754 458899999999999999999999 899999999999999999999999999987543110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||........
T Consensus 161 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~ 217 (267)
T cd06646 161 -----------------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217 (267)
T ss_pred -----------------------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh
Confidence 0111234677899999884 34578899999999999999999999843321110
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
...+ .. .....+.... .......+.+++.+||..+|++|||++++++.
T Consensus 218 -~~~~------~~---~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 218 -LFLM------SK---SNFQPPKLKD---KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred -heee------ec---CCCCCCCCcc---ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0000 00 0000111110 01123468899999999999999999999864
No 155
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-37 Score=334.21 Aligned_cols=246 Identities=22% Similarity=0.282 Sum_probs=191.7
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+++.. +++.||+|++.+. .....+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~g 127 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPG 127 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCC
Confidence 357999999999999976 4889999998653 222335578999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... .+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 128 g~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~- 196 (370)
T cd05596 128 GDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG- 196 (370)
T ss_pred CcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC-
Confidence 9999998643 37788899999999999999999 899999999999999999999999999987543211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC----CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV----KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 197 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 250 (370)
T cd05596 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC
Confidence 0111234578999999998653 4789999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~ 704 (714)
. ....+.........+ ...... .....+.+++.+|++.+|++ |||++|+++
T Consensus 251 ~-----~~~~~~~i~~~~~~~------~~~~~~---~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 251 S-----LVGTYSKIMDHKNSL------TFPDDI---EISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred C-----HHHHHHHHHcCCCcC------CCCCcC---CCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1 122222222211110 011110 12236788999999999988 999999864
No 156
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.1e-37 Score=318.46 Aligned_cols=254 Identities=25% Similarity=0.401 Sum_probs=198.1
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
..||+|+||.||++... ++..+|+|.+........+.|.+|++++++++|+||+++++++...+..++||||++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMR 90 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCC
Confidence 47999999999999742 356899999887666666789999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCC---------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 483 NGSLATALHGKPGM---------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 483 ~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
+|+|.+++...... .....+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 91 HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEEECCCC
Confidence 99999998754210 111358899999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-C
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G 632 (714)
+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 168 ~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 221 (280)
T cd05092 168 MSRDIYSTDY--------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYG 221 (280)
T ss_pred ceeEcCCCce--------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCC
Confidence 9875431100 001112223567999999998899999999999999999999 8
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
+.||..... .+. +.... ..... ..+ . .....+.+++.+||+.||++||++.||++.|++
T Consensus 222 ~~p~~~~~~--~~~---~~~~~-~~~~~---~~~---~-----~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 222 KQPWYQLSN--TEA---IECIT-QGREL---ERP---R-----TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CCCCccCCH--HHH---HHHHH-cCccC---CCC---C-----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 999843221 111 11111 11110 001 0 112357899999999999999999999999874
No 157
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.5e-37 Score=316.01 Aligned_cols=247 Identities=24% Similarity=0.418 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++|+||+++++++ ..+..++||||+++|+|.+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~ 89 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVD 89 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHH
Confidence 47999999999999998899999999876543 346789999999999999999999987 4567899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++....+ ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++........
T Consensus 90 ~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~----- 157 (260)
T cd05067 90 FLKTPEG----IKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY----- 157 (260)
T ss_pred HHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-----
Confidence 9875432 458999999999999999999999 8999999999999999999999999999875432110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+..
T Consensus 158 ----------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~ 213 (260)
T cd05067 158 ----------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVI 213 (260)
T ss_pred ----------------------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHH
Confidence 01112223567999999988889999999999999999999 999995322 11121
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
..+ ..... ..... ....++.+++.+||..+|++|||++++++.|+.
T Consensus 214 ~~~----~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 214 QNL----ERGYR------MPRPD-----NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHH----HcCCC------CCCCC-----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111 11111 00111 112368899999999999999999999999975
No 158
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.9e-38 Score=333.01 Aligned_cols=246 Identities=20% Similarity=0.246 Sum_probs=192.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||++... +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGG 86 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCC
Confidence 47999999999999976 58999999997642 223456889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~- 157 (330)
T cd05601 87 DLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM- 157 (330)
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc-
Confidence 9999997653 358999999999999999999999 8999999999999999999999999999976532110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC------CCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK------VVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 158 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 158 --------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred --------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 0112235688899999986 45678999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... ...+......... .. ..... .....+.+++..|+. +|++|||++++++
T Consensus 212 ~~~-----~~~~~~i~~~~~~-~~-----~~~~~---~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 212 GTS-----AKTYNNIMNFQRF-LK-----FPEDP---KVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCH-----HHHHHHHHcCCCc-cC-----CCCCC---CCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 211 1122222211110 00 00010 122357789999997 9999999999874
No 159
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.7e-37 Score=334.65 Aligned_cols=272 Identities=21% Similarity=0.282 Sum_probs=195.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++..++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g 86 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGG 86 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCc
Confidence 47999999999999986 48999999997532 233456789999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+......
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 87 DMMTLLMKK------DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred HHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 999999754 358999999999999999999999 89999999999999999999999999999765322111
Q ss_pred CCccCCCC--CC------CCch--hhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCC
Q 005102 565 PTLQSNRM--PA------EKPQ--ERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 565 ~~~~~~~~--~~------~~~~--~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
........ .. ..+. ...................||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 00000000 00 0000 00000000000001123468999999999998899999999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC---HHHHHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT---MRHISD 704 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~ 704 (714)
||..... .+...........+ ...... .....+.+++.+|+. +|.+|++ ++|+++
T Consensus 238 Pf~~~~~-----~~~~~~i~~~~~~~------~~~~~~---~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 238 PFCSDNP-----QETYRKIINWKETL------QFPDEV---PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCH-----HHHHHHHHcCCCcc------CCCCCC---CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9943221 11111111111110 001110 112356788889996 9999998 887765
No 160
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=299.50 Aligned_cols=244 Identities=24% Similarity=0.293 Sum_probs=195.3
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
++||+|.|+.||++.+ ++|+.+|+|.+... .....+++.+|+++.+.++||||+++.+.+.+.+..|+|+|+|.+|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~d 96 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 96 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchH
Confidence 3799999999999876 45999999987643 33456788999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhhhccC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~~ 562 (714)
|..-+-.+ .-+++..+-.++.||++||.|+|. ++|||||+||+|+++.. .--+||+|||+|..+..
T Consensus 97 l~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-- 165 (355)
T KOG0033|consen 97 LFEDIVAR------EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-- 165 (355)
T ss_pred HHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeCC--
Confidence 98766544 236788889999999999999999 99999999999999953 34589999999987651
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
........||++|||||++...+|+..+|||+.|||||-|+.|+.||...
T Consensus 166 ---------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--- 215 (355)
T KOG0033|consen 166 ---------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--- 215 (355)
T ss_pred ---------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc---
Confidence 22344667899999999999999999999999999999999999999532
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.....+........ +-.|... ...++..+++.+||..||.+|.|+.|.++
T Consensus 216 --~~~rlye~I~~g~yd---~~~~~w~------~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 216 --DQHRLYEQIKAGAYD---YPSPEWD------TVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred --cHHHHHHHHhccccC---CCCcccC------cCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 122223333333221 1111111 12235678999999999999999998764
No 161
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.2e-37 Score=321.68 Aligned_cols=243 Identities=22% Similarity=0.338 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++......++||||+++++|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence 46999999999999964 58999999998765555678899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~----- 170 (296)
T cd06654 106 DVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 170 (296)
T ss_pred HHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccc-----
Confidence 998643 37889999999999999999999 899999999999999999999999999987543211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......+++.|+|||.+.+..++.++|||||||++|||++|+.||...... .
T Consensus 171 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~ 223 (296)
T cd06654 171 -----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----R 223 (296)
T ss_pred -----------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----H
Confidence 0111234677899999998888999999999999999999999999533211 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.. ...... +... ........+.+++.+||..||++|||+.++++
T Consensus 224 ~~~~-~~~~~~-------~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 224 ALYL-IATNGT-------PELQ---NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred hHHH-HhcCCC-------CCCC---CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 1111 111110 0000 01112345789999999999999999999987
No 162
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=325.34 Aligned_cols=238 Identities=23% Similarity=0.399 Sum_probs=195.4
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||.|+||.||-++.. +...||||++.-... ....++.+|+..|.+++|||+|.+.|+|......||||||| -|+
T Consensus 33 EIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lGS 111 (948)
T KOG0577|consen 33 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LGS 111 (948)
T ss_pred HhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hcc
Confidence 4999999999999964 578999999975433 34567899999999999999999999999999999999999 558
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
-.|++.-.. .++.+.++..|..+.+.||+|||+ .+.||||||+.|||+++.|.+||+|||.|....
T Consensus 112 AsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------ 177 (948)
T KOG0577|consen 112 ASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------ 177 (948)
T ss_pred HHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcC------
Confidence 888886543 568889999999999999999999 899999999999999999999999999987643
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
...+++|||+|||||++. .+.|+-|+||||+||+..||..+++|++....
T Consensus 178 --------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA- 230 (948)
T KOG0577|consen 178 --------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA- 230 (948)
T ss_pred --------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-
Confidence 234578999999999985 46799999999999999999999999865421
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+..+.... .|.+. ..+....+..++..||++-|.+|||.++++.
T Consensus 231 ----MSALYHIAQNe-------sPtLq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 231 ----MSALYHIAQNE-------SPTLQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ----HHHHHHHHhcC-------CCCCC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11111111111 12222 2345567899999999999999999998875
No 163
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.5e-37 Score=313.27 Aligned_cols=243 Identities=24% Similarity=0.388 Sum_probs=193.3
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEE-eCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW-SVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||++... |..||+|.++... ..+.|.+|+.++++++|+|++++++++. ..+..++||||+++++|.
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (256)
T cd05082 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88 (256)
T ss_pred eeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHH
Confidence 57999999999999875 7889999987543 2467899999999999999999999865 456789999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++..... ..+++..+.+++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----- 156 (256)
T cd05082 89 DYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 156 (256)
T ss_pred HHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC-----
Confidence 99976532 348899999999999999999999 899999999999999999999999999987432110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
....++..|+|||++.+..++.++|||||||++|||++ |+.||... ..
T Consensus 157 --------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~ 205 (256)
T cd05082 157 --------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PL 205 (256)
T ss_pred --------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CH
Confidence 11122456999999988889999999999999999998 99998422 12
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
.+....... ... +.... .....+.+++.+||+.+|++|||+.++++.|+++
T Consensus 206 ~~~~~~~~~-~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 206 KDVVPRVEK-GYK------MDAPD-----GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHHHhc-CCC------CCCCC-----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 222221111 110 11111 1233688999999999999999999999999864
No 164
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.1e-37 Score=321.82 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=199.3
Q ss_pred cccccccCceEEEEEEEC--------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLE--------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 477 (714)
.+.||+|+||.||++... ++..+|+|.+.... .....++.+|+++++++ +||||+++++++...+..++|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457999999999999853 23579999998642 33446788999999999 799999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 478 YDYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|||+++|+|.+++...... .....+++.++++++.|++.||+|||+ ++++||||||+||++++++.+
T Consensus 103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~ 179 (307)
T cd05098 103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 179 (307)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEcCCCcE
Confidence 9999999999999764321 011358999999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|
T Consensus 180 kL~dfg~a~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ 233 (307)
T cd05098 180 KIADFGLARDIHHIDY--------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 233 (307)
T ss_pred EECCCcccccccccch--------------------------hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHH
Confidence 9999999875432110 00011112345699999999888999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||++ |+.||... ...+..... ..... ..... ....++.+++.+||+.+|++|||+.+|++.|
T Consensus 234 el~~~g~~p~~~~-----~~~~~~~~~-~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 234 EIFTLGGSPYPGV-----PVEELFKLL-KEGHR------MDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred HHHcCCCCCCCcC-----CHHHHHHHH-HcCCC------CCCCC-----cCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9998 88888322 111222211 11110 00111 1223678999999999999999999999999
Q ss_pred hhhhcc
Q 005102 707 DRLIVS 712 (714)
Q Consensus 707 ~~i~~~ 712 (714)
+++...
T Consensus 297 ~~~~~~ 302 (307)
T cd05098 297 DRILAL 302 (307)
T ss_pred HHHHHH
Confidence 998754
No 165
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.2e-37 Score=326.57 Aligned_cols=236 Identities=21% Similarity=0.301 Sum_probs=187.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
..||+|+||+||+|... +|+.||+|++... .....+.+..|..++..+. |++|+++++++...+..|+||||+++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~ 85 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNG 85 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCC
Confidence 47999999999999975 5899999998753 2233456788999998885 57788899999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 86 g~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 86 GDLMYHIQQV------GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999998754 458999999999999999999999 899999999999999999999999999987432110
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||.... .
T Consensus 156 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--~ 206 (323)
T cd05615 156 ---------------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED--E 206 (323)
T ss_pred ---------------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC--H
Confidence 11123347889999999998899999999999999999999999994321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
....+........ .... ....+.+++.+||+.+|++|++.
T Consensus 207 ---~~~~~~i~~~~~~--------~p~~-----~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 207 ---DELFQSIMEHNVS--------YPKS-----LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---HHHHHHHHhCCCC--------CCcc-----CCHHHHHHHHHHcccCHhhCCCC
Confidence 1122222222111 1111 12357789999999999999985
No 166
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.3e-37 Score=319.94 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=197.5
Q ss_pred ccccccCceEEEEEEECC-----------------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEe
Q 005102 409 FVLGKSGIGIVYKVVLED-----------------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (714)
+.||+|+||.||+|...+ +..||+|++..... ...+.+.+|++++++++||||+++++++..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 90 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTV 90 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEec
Confidence 479999999999998653 24689999886533 345678999999999999999999999999
Q ss_pred CCceeEEEeccCCCCHhhhhhCCCCC-----CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC
Q 005102 471 VDEKLLIYDYIPNGSLATALHGKPGM-----VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM 545 (714)
Q Consensus 471 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~ 545 (714)
.+..++||||+++++|.+++...... .....+++..+..++.|++.||+|||+ .+|+||||||+||++++++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Nili~~~~ 167 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVGKNY 167 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhceeecCCC
Confidence 99999999999999999999765311 011368999999999999999999999 8999999999999999999
Q ss_pred CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 546 EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 546 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.++|+|||+++....... ........++..|+|||++.+..++.++|||||||+
T Consensus 168 ~~~l~dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 221 (296)
T cd05051 168 TIKIADFGMSRNLYSSDY--------------------------YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221 (296)
T ss_pred ceEEccccceeecccCcc--------------------------eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHH
Confidence 999999999875432110 011122334677999999988889999999999999
Q ss_pred HHHHHh--CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 626 LLEMIT--GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 626 l~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
+|||++ |..||.... ..+.............. ....+. . .....++.+++.+||+.||++|||+.||+
T Consensus 222 l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~-~-----~~~~~~l~~li~~cl~~~p~~Rpt~~el~ 291 (296)
T cd05051 222 LWEILTLCREQPYEHLT--DQQVIENAGHFFRDDGR--QIYLPR-P-----PNCPKDIYELMLECWRRDEEDRPTFREIH 291 (296)
T ss_pred HHHHHhcCCCCCCCCcC--hHHHHHHHHhccccccc--cccCCC-c-----cCCCHHHHHHHHHHhccChhcCCCHHHHH
Confidence 999998 667773221 12222222111111110 000000 0 11224688999999999999999999999
Q ss_pred HHHhh
Q 005102 704 DALDR 708 (714)
Q Consensus 704 ~~L~~ 708 (714)
+.|++
T Consensus 292 ~~L~~ 296 (296)
T cd05051 292 LFLQR 296 (296)
T ss_pred HHhcC
Confidence 98863
No 167
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.4e-37 Score=317.08 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=198.2
Q ss_pred cccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
...||+|+||.||+|...+ +..||+|.+..... .....+.+|+.+++.++||||+++++++......++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 90 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMEL 90 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEec
Confidence 3579999999999998753 36899999876532 3345788999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCC----CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMV----SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
+++|+|.+++....... ....++|..+.+++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~dfg~~~ 167 (277)
T cd05032 91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTR 167 (277)
T ss_pred CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECCcccch
Confidence 99999999987543211 11347899999999999999999999 899999999999999999999999999987
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p 635 (714)
....... ........++..|+|||.+.+..++.++|||||||++||++| |+.|
T Consensus 168 ~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 221 (277)
T cd05032 168 DIYETDY--------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQP 221 (277)
T ss_pred hhccCcc--------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCC
Confidence 6532210 001112234667999999988889999999999999999998 8888
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
|... .......+. . .... +..... ...++.+++.+||+.+|++|||+.++++.|++
T Consensus 222 ~~~~--~~~~~~~~~---~-~~~~------~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 222 YQGL--SNEEVLKFV---I-DGGH------LDLPEN-----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CccC--CHHHHHHHH---h-cCCC------CCCCCC-----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 8432 112222211 1 1110 011111 13468899999999999999999999999874
No 168
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.3e-37 Score=331.06 Aligned_cols=220 Identities=22% Similarity=0.307 Sum_probs=170.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|... +++.||||++.+.. ......+.+|+.++.+++||||+++++++.+.+..|+||||+++|
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg 86 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGG 86 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCC
Confidence 47999999999999876 48999999997532 223356888999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 87 DMMTLLMKK------DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 999999765 458999999999999999999999 89999999999999999999999999999865422110
Q ss_pred CCccC--CCCCCCC-----chhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 565 PTLQS--NRMPAEK-----PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 565 ~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
..... ...+... .....................||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 00000 0000000 0000000000000111234578999999999999999999999999999999999999994
No 169
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.8e-37 Score=314.37 Aligned_cols=253 Identities=27% Similarity=0.468 Sum_probs=198.1
Q ss_pred cccccccCceEEEEEEEC----CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|... .+..+|+|.++... ....+.|.+|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 357999999999999864 23479999987643 2334678999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+++|.+++.... ..+++.++.+|+.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 89 NGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 999999997653 358999999999999999999999 899999999999999999999999999998654211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. ........++..|+|||++.+..++.++||||||+++||+++ |+.||.....
T Consensus 161 ~~-------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~ 215 (267)
T cd05066 161 EA-------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215 (267)
T ss_pred ce-------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence 00 000111222456999999998889999999999999999887 9999853321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.+....+ .+.... + ... .....+.+++.+||+.+|++||++.++++.|++++
T Consensus 216 --~~~~~~~----~~~~~~-----~-~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 216 --QDVIKAI----EEGYRL-----P-APM-----DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred --HHHHHHH----hCCCcC-----C-CCC-----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 1121111 111110 0 000 12236789999999999999999999999998863
No 170
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9e-37 Score=325.94 Aligned_cols=260 Identities=25% Similarity=0.357 Sum_probs=197.2
Q ss_pred cccccccCceEEEEEEE------CCCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeC-CceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVL------EDGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSV-DEKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~~~~lV~ 478 (714)
.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++.++ +||||+++++++... ...++||
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence 45899999999999974 347899999997643 23346788999999999 689999999988654 4578999
Q ss_pred eccCCCCHhhhhhCCCCCC-------------------------------------------------------------
Q 005102 479 DYIPNGSLATALHGKPGMV------------------------------------------------------------- 497 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~------------------------------------------------------------- 497 (714)
||+++|+|.+++.......
T Consensus 92 ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (343)
T cd05103 92 EFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDL 171 (343)
T ss_pred eccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhh
Confidence 9999999999986532100
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCc
Q 005102 498 SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKP 577 (714)
Q Consensus 498 ~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 577 (714)
....+++.++.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------- 234 (343)
T cd05103 172 YKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-------------- 234 (343)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcc--------------
Confidence 01247888999999999999999999 8999999999999999999999999999876422110
Q ss_pred hhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhh
Q 005102 578 QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEE 656 (714)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 656 (714)
........++..|+|||.+.+..++.++||||||+++|||++ |..||....... .. . .....
T Consensus 235 ------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~---~-~~~~~ 297 (343)
T cd05103 235 ------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF---C-RRLKE 297 (343)
T ss_pred ------------hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HH---H-HHHhc
Confidence 001112234567999999988889999999999999999997 898984332211 11 1 11111
Q ss_pred cCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 657 KKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 657 ~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
... .... .. ...++.+++.+||+.||++|||+.||++.|+.+...
T Consensus 298 ~~~------~~~~-~~----~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 298 GTR------MRAP-DY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred cCC------CCCC-CC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111 0001 01 112578999999999999999999999999998765
No 171
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.6e-37 Score=316.63 Aligned_cols=239 Identities=21% Similarity=0.321 Sum_probs=186.8
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLED--------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
.||+|+||.||+|.... ...||+|.+........+.+..|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 69999999999998643 2348888887655555567899999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC--------eEEcccc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME--------PHVSDFG 553 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DFG 553 (714)
++|+|.++++... ..+++..+++++.||+.||+|||+ ++|+||||||+||+++.++. +|++|||
T Consensus 82 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 82 KFGSLDTYLKKNK-----NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCcHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999997653 358899999999999999999999 89999999999999987765 5899999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhC
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG 632 (714)
++..... .....++..|+|||++.+. .++.++|||||||++|||++|
T Consensus 154 ~~~~~~~--------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 154 ISITVLP--------------------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred cccccCC--------------------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence 8754321 1112346779999999864 579999999999999999999
Q ss_pred C-CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 633 R-TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 633 ~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
. .|+..... ..... ...... .++.. ...++.+++.+||+.||++|||++++++.|+
T Consensus 202 ~~~~~~~~~~-----~~~~~-~~~~~~--------~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 202 GDKPLSALDS-----QKKLQ-FYEDRH--------QLPAP-----KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred CCCChhhccH-----HHHHH-HHHccc--------cCCCC-----CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 5 45422111 11111 111111 11111 1235789999999999999999999999873
No 172
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-37 Score=334.37 Aligned_cols=272 Identities=22% Similarity=0.269 Sum_probs=198.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++..++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGG 86 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCC
Confidence 47999999999999986 58999999997542 233467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 87 DLMNLLIRK------DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 999999765 358899999999999999999999 89999999999999999999999999999866433211
Q ss_pred CCccCCCCCCCCchhhhcc-cccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQK-SVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
................... ..............||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-- 235 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL-- 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH--
Confidence 0000000000000000000 0000001122345689999999999999999999999999999999999999954321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-MRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~ 704 (714)
............. ..-|. .. .....+.+++.+|+. ||.+||+ ++++++
T Consensus 236 ---~~~~~~i~~~~~~---~~~p~---~~---~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 236 ---QETYNKIINWKES---LRFPP---DP---PVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred ---HHHHHHHhccCCc---ccCCC---CC---CCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 1111111111000 00010 00 022357889999997 9999999 999986
No 173
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=7.4e-37 Score=312.61 Aligned_cols=244 Identities=23% Similarity=0.335 Sum_probs=196.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|++|.||+|..+ +++.|++|.+... .....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGD 85 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCc
Confidence 47999999999999975 5899999998653 33445678999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++..+.+++.|++.||.|||+ .+++|+||||+||++++++.+||+|||+++......
T Consensus 86 L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~--- 155 (256)
T cd08529 86 LHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT--- 155 (256)
T ss_pred HHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc---
Confidence 9999976532 458899999999999999999999 899999999999999999999999999987653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......|+..|+|||+..+..++.++||||||+++|||++|+.||.... ...
T Consensus 156 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~ 208 (256)
T cd08529 156 -------------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--QGA 208 (256)
T ss_pred -------------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--HHH
Confidence 01112235678999999998889999999999999999999999994322 111
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.......... +.... .....+.+++.+||+.+|++||++.++++
T Consensus 209 ---~~~~~~~~~~-------~~~~~-----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 209 ---LILKIIRGVF-------PPVSQ-----MYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ---HHHHHHcCCC-------CCCcc-----ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1111111110 11110 12336889999999999999999999875
No 174
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.4e-36 Score=313.13 Aligned_cols=254 Identities=19% Similarity=0.287 Sum_probs=188.9
Q ss_pred cccccCceEEEEEEECCC---cEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLEDG---HTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||++...++ ..+++|.+.... ....+.|.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999986543 356677766543 2345689999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.++++..... ....++..+..++.||+.||+|||+ .+++||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-- 154 (268)
T cd05086 82 LKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-- 154 (268)
T ss_pred HHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchh--
Confidence 99999764321 1346777888999999999999999 8999999999999999999999999998753211000
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-------CCCCchhhhHHHHHHHHHHHh-CCCccc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-------VKPSQKWDIYSYGVILLEMIT-GRTAVV 637 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~~DVwS~Gvvl~ellt-G~~p~~ 637 (714)
........++..|+|||++.. ..++.++|||||||++|||++ |..||.
T Consensus 155 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 155 ------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred ------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 011122345778999999743 245789999999999999997 466773
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
... . .+.+........ ....++.+..... ..+.+++..|| .+|++||++++|++.|.
T Consensus 211 ~~~--~---~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 211 HLS--D---REVLNHVIKDQQ--VKLFKPQLELPYS-----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCC--H---HHHHHHHHhhcc--cccCCCccCCCCc-----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 221 1 122222222221 2233444333222 35778999999 67999999999998874
No 175
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.4e-36 Score=310.68 Aligned_cols=244 Identities=27% Similarity=0.449 Sum_probs=197.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||||+++++|.+
T Consensus 12 ~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 89 (256)
T cd05039 12 ATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD 89 (256)
T ss_pred eeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHH
Confidence 47999999999999985 88999999987644 45789999999999999999999999998889999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++..... ..+++..+..++.|++.||.|||+ ++++||||||+||++++++.+||+|||.++......
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------ 156 (256)
T cd05039 90 YLRSRGR----AVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------ 156 (256)
T ss_pred HHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc------
Confidence 9976532 358999999999999999999999 899999999999999999999999999987653210
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
....++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..++.
T Consensus 157 -------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~ 209 (256)
T cd05039 157 -------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVV 209 (256)
T ss_pred -------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--HHHHH
Confidence 01112456999999988889999999999999999997 999984321 11111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
. ....... +.... .....+.+++.+||..+|++|||++|++++|+++
T Consensus 210 ~----~~~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 210 P----HVEKGYR------MEAPE-----GCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred H----HHhcCCC------CCCcc-----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1 1111111 00111 1124688999999999999999999999999864
No 176
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.6e-37 Score=318.00 Aligned_cols=245 Identities=20% Similarity=0.311 Sum_probs=193.5
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||+|.... +..+|+|.+........+.+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~ 90 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 90 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHH
Confidence 469999999999999864 7888999987766666678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
.++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 91 ~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----- 157 (282)
T cd06643 91 AVMLELE-----RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI----- 157 (282)
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc-----
Confidence 9886532 458999999999999999999999 899999999999999999999999999986542110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......++..|+|||++. +..++.++|||||||++|||++|+.||.....
T Consensus 158 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~- 213 (282)
T cd06643 158 -----------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP- 213 (282)
T ss_pred -----------------------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-
Confidence 0112234678899999984 45578899999999999999999999843211
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.+........ .....+ ......+.+++.+||+.||++|||+.++++
T Consensus 214 ----~~~~~~~~~~~~--~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 214 ----MRVLLKIAKSEP--PTLAQP--------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ----HHHHHHHhhcCC--CCCCCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111111 011111 011236789999999999999999999874
No 177
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.2e-36 Score=315.77 Aligned_cols=259 Identities=20% Similarity=0.294 Sum_probs=201.0
Q ss_pred cccccccCceEEEEEEECC-----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLED-----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~ 480 (714)
.++||+|+||.||+|.+.+ +..|++|++.... ....+.+.+|+.++++++||||+++++++.. ....++++||
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~ 90 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY 90 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence 3589999999999999866 6889999987543 3345678899999999999999999999876 4678999999
Q ss_pred cCCCCHhhhhhCCCCC--CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 481 IPNGSLATALHGKPGM--VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
+++|+|.+++...... .....+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.+
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~ 167 (280)
T cd05043 91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDL 167 (280)
T ss_pred CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence 9999999998654211 011358999999999999999999999 89999999999999999999999999999754
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVV 637 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~ 637 (714)
..... ........++..|+|||++.+..++.++||||||+++||+++ |+.||.
T Consensus 168 ~~~~~--------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 221 (280)
T cd05043 168 FPMDY--------------------------HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYV 221 (280)
T ss_pred cCCce--------------------------EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcC
Confidence 32110 000111234567999999988889999999999999999999 999994
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.. ...++..++ ....... ... ....++.+++.+||..||++|||+.++++.|+.+...
T Consensus 222 ~~--~~~~~~~~~----~~~~~~~------~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 222 EI--DPFEMAAYL----KDGYRLA------QPI-----NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred cC--CHHHHHHHH----HcCCCCC------CCC-----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 32 112222221 1111110 000 1123688999999999999999999999999998653
No 178
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.4e-36 Score=317.92 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=195.4
Q ss_pred ccccccCceEEEEEEEC-----------------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-----------------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (714)
+.||+|+||.||++... ++..||+|++.... ....++|.+|++++++++|+||+++++++..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 90 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCIT 90 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 47999999999998643 23478999997653 3344679999999999999999999999999
Q ss_pred CCceeEEEeccCCCCHhhhhhCCCCC-----CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC
Q 005102 471 VDEKLLIYDYIPNGSLATALHGKPGM-----VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM 545 (714)
Q Consensus 471 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~ 545 (714)
.+..++||||+++|+|.+++...... .....+++.++.+++.|++.||+|||+ .+++||||||+||++++++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Nili~~~~ 167 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKNY 167 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheEEEcCCC
Confidence 99999999999999999998754321 111347889999999999999999999 8999999999999999999
Q ss_pred CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 546 EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 546 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.+||+|||+++.+..... ........++..|+|||...++.++.++|||||||+
T Consensus 168 ~~~l~dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~ 221 (296)
T cd05095 168 TIKIADFGMSRNLYSGDY--------------------------YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVT 221 (296)
T ss_pred CEEeccCcccccccCCcc--------------------------eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHH
Confidence 999999999875432110 000111223466999999888889999999999999
Q ss_pred HHHHHh--CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 626 LLEMIT--GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 626 l~ellt--G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
+|||++ |..||.... ..+............. .....+.. ......+.+++.+||+.||++|||+.+|.
T Consensus 222 l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~ 291 (296)
T cd05095 222 LWEILTLCKEQPYSQLS--DEQVIENTGEFFRDQG--RQVYLPKP------ALCPDSLYKLMLSCWRRNAKERPSFQEIH 291 (296)
T ss_pred HHHHHHhCCCCCccccC--hHHHHHHHHHHHhhcc--ccccCCCC------CCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 999998 667774321 1111111111111110 00001100 01224688999999999999999999999
Q ss_pred HHHhh
Q 005102 704 DALDR 708 (714)
Q Consensus 704 ~~L~~ 708 (714)
+.|++
T Consensus 292 ~~l~~ 296 (296)
T cd05095 292 ATLLE 296 (296)
T ss_pred HHHhC
Confidence 99874
No 179
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-36 Score=311.35 Aligned_cols=252 Identities=28% Similarity=0.404 Sum_probs=199.5
Q ss_pred cccccCceEEEEEEECC----CcEEEEEEeCCCCchh-HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED----GHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|.... +..||+|.+....... .+.+.+|++.+.+++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 69999999999999764 7899999998764433 578999999999999999999999999989999999999999
Q ss_pred CHhhhhhCCCCC---CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 485 SLATALHGKPGM---VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
+|.+++...... .....+++.++.+++.|++.||+|||+ ++++||||||+||++++++.+||+|||.++.....
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999765210 001458999999999999999999999 89999999999999999999999999999865432
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~ 640 (714)
.. ........++..|+|||.+....++.++||||+|+++|||++ |+.||....
T Consensus 159 ~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 212 (262)
T cd00192 159 DY--------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS 212 (262)
T ss_pred cc--------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC
Confidence 11 011122334677999999988889999999999999999999 699985431
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
..++ ...... ... ..... ....++.+++.+||+.+|++|||+.|+++.|+
T Consensus 213 --~~~~---~~~~~~-~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 213 --NEEV---LEYLRK-GYR------LPKPE-----YCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --HHHH---HHHHHc-CCC------CCCCc-----cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112 211111 110 00111 11346889999999999999999999999874
No 180
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-36 Score=315.73 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=190.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
++||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l 86 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSL 86 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCCh
Confidence 47999999999999864 58899999987542 33346789999999999999999999999999999999999999998
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
..+. .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++......
T Consensus 87 ~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----- 148 (279)
T cd06619 87 DVYR----------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----- 148 (279)
T ss_pred HHhh----------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----
Confidence 6542 36788899999999999999999 89999999999999999999999999998754211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch-
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD- 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~- 645 (714)
......||..|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 149 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~ 203 (279)
T cd06619 149 -------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL 203 (279)
T ss_pred -------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc
Confidence 112235678899999999889999999999999999999999999543221111
Q ss_pred -hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 646 -LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 646 -l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
...+........ .+..... ....++.+++.+||+.||++||+++|+++.
T Consensus 204 ~~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 204 MPLQLLQCIVDED-------PPVLPVG----QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred chHHHHHHHhccC-------CCCCCCC----cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111111111 1111111 122357899999999999999999998753
No 181
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.9e-37 Score=312.60 Aligned_cols=237 Identities=24% Similarity=0.374 Sum_probs=187.5
Q ss_pred cccccCceEEEEEEECCCc-----------EEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEE
Q 005102 410 VLGKSGIGIVYKVVLEDGH-----------TLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 478 (714)
.||+|+||.||+|.+.+.. .|++|.+...... ...|.+|+.++++++||||+++++++.. +..++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 6899999999999986533 5788877654433 5789999999999999999999999988 7889999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-------CeEEcc
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-------EPHVSD 551 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-------~~kl~D 551 (714)
||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|
T Consensus 80 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 80 EYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999997653 258899999999999999999999 8999999999999999887 799999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC--CCCchhhhHHHHHHHHHH
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV--KPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DVwS~Gvvl~el 629 (714)
||+++..... ....++..|+|||++.+. .++.++|||||||++|||
T Consensus 152 fg~a~~~~~~--------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l 199 (259)
T cd05037 152 PGIPITVLSR--------------------------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEI 199 (259)
T ss_pred CCcccccccc--------------------------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHH
Confidence 9998754210 111234569999999876 789999999999999999
Q ss_pred Hh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 630 IT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 630 lt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
++ |..||..... .....+.. ... ..+... ...+.+++.+||..+|++|||+.++++.|+
T Consensus 200 ~~~~~~p~~~~~~--~~~~~~~~----~~~---------~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 200 CSNGEEPLSTLSS--SEKERFYQ----DQH---------RLPMPD----CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HhCCCCCcccCCc--hhHHHHHh----cCC---------CCCCCC----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99 5667743321 11111111 110 000111 146889999999999999999999998874
No 182
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.8e-36 Score=309.92 Aligned_cols=246 Identities=22% Similarity=0.396 Sum_probs=195.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||++.+.++..+|+|.+..... ...+|.+|++++++++||||+++++++......++||||+++++|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 88 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSD 88 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHH
Confidence 47999999999999987788999999875433 23678999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------ 154 (256)
T cd05112 89 YLRAQR-----GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ------ 154 (256)
T ss_pred HHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCc------
Confidence 987553 347899999999999999999999 899999999999999999999999999987542110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 155 ---------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~ 208 (256)
T cd05112 155 ---------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NS 208 (256)
T ss_pred ---------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HH
Confidence 000111223567999999998889999999999999999998 999984321 11
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
...... .... ....+.. ....+.+++.+||+.+|++|||+.|+++.|.
T Consensus 209 ~~~~~~-~~~~---~~~~~~~--------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 209 EVVETI-NAGF---RLYKPRL--------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHH-hCCC---CCCCCCC--------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 122111 1111 1111111 1236889999999999999999999999873
No 183
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-36 Score=315.59 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=194.9
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|.+.+ +..||+|.+..... .....|.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 91 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELM 91 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecC
Confidence 479999999999999753 56899998875433 33457999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCC-CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcccchhhh
Q 005102 482 PNGSLATALHGKPGM-VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSDFGLARL 557 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~ 557 (714)
++++|.+++...... .....+++.++++++.||+.||+|||+ ++++||||||+||+++.++ .+||+|||+++.
T Consensus 92 ~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~ 168 (277)
T cd05036 92 AGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD 168 (277)
T ss_pred CCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEeccCccccc
Confidence 999999999765321 111358999999999999999999999 8999999999999998754 599999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... .........+..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 169 ~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf 222 (277)
T cd05036 169 IYRASY--------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPY 222 (277)
T ss_pred cCCccc--------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 521110 000111122456999999998899999999999999999997 99998
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
..... ..+ +........ +..... ....+.+++.+||+.+|++|||+.+|++.|++
T Consensus 223 ~~~~~--~~~---~~~~~~~~~-------~~~~~~-----~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 223 PGRTN--QEV---MEFVTGGGR-------LDPPKG-----CPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred CCCCH--HHH---HHHHHcCCc-------CCCCCC-----CCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 43221 111 211111111 001111 12368899999999999999999999998863
No 184
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9.6e-37 Score=320.12 Aligned_cols=254 Identities=25% Similarity=0.400 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEECC-Cc--EEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GH--TLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|.+++ +. .+|+|.+.... ......+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 92 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 92 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCC
Confidence 479999999999999753 54 46888776543 33446788999999999 899999999999999999999999999
Q ss_pred CCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 484 GSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 484 gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
|+|.++++..... .....+++.+++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||
T Consensus 93 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~kl~dfg 169 (303)
T cd05088 93 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 169 (303)
T ss_pred CcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcEEeCccc
Confidence 9999999754311 011358899999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-C
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G 632 (714)
+++..... .......++..|+|||++.+..++.++|||||||++|||+| |
T Consensus 170 ~~~~~~~~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 220 (303)
T cd05088 170 LSRGQEVY-----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 220 (303)
T ss_pred cCcccchh-----------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcC
Confidence 98632110 00111122456999999988889999999999999999998 9
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
..||..... .+..... .... ...... .....+.+++.+||+.+|++||++++++..|+++..
T Consensus 221 ~~p~~~~~~-----~~~~~~~-~~~~------~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 221 GTPYCGMTC-----AELYEKL-PQGY------RLEKPL-----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred CCCcccCCh-----HHHHHHH-hcCC------cCCCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 999843221 1111111 1110 000000 112357899999999999999999999999998754
No 185
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-36 Score=323.65 Aligned_cols=259 Identities=24% Similarity=0.359 Sum_probs=199.8
Q ss_pred cccccccCceEEEEEEECC--------CcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLED--------GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 477 (714)
...||+|+||.||+|.... +..||+|.+.... ....+++.+|+++++++ +||||++++++|...+..++|
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVL 96 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEE
Confidence 4589999999999997531 2478999887543 33456789999999999 799999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 478 YDYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|||+++|+|.+++...... .....+++.++++++.|++.||+|||+ ++|+||||||+||++++++.+
T Consensus 97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~~~~~ 173 (334)
T cd05100 97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTEDNVM 173 (334)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcE
Confidence 9999999999998754210 112458899999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........++..|+|||++.+..++.++||||||+++|
T Consensus 174 kL~Dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 227 (334)
T cd05100 174 KIADFGLARDVHNIDY--------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLW 227 (334)
T ss_pred EECCcccceecccccc--------------------------cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHH
Confidence 9999999875432110 00111122345699999999889999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||++ |..||... ...++...... ... +.... ....++.+++.+||+.+|++|||+.|+++.|
T Consensus 228 el~~~g~~p~~~~-----~~~~~~~~~~~-~~~------~~~~~-----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 228 EIFTLGGSPYPGI-----PVEELFKLLKE-GHR------MDKPA-----NCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred HHHhcCCCCCCCC-----CHHHHHHHHHc-CCC------CCCCC-----CCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9999 88888432 22222222211 110 00111 1223688999999999999999999999999
Q ss_pred hhhhcc
Q 005102 707 DRLIVS 712 (714)
Q Consensus 707 ~~i~~~ 712 (714)
+++...
T Consensus 291 ~~~~~~ 296 (334)
T cd05100 291 DRVLTV 296 (334)
T ss_pred HHHhhh
Confidence 998743
No 186
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.1e-37 Score=334.20 Aligned_cols=255 Identities=15% Similarity=0.169 Sum_probs=189.5
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||++.+.. ++.||||.... ..+.+|++++++++|+|||++++++...+..++|||++. ++|.
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~ 247 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLY 247 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHH
Confidence 579999999999999865 78999996432 346789999999999999999999999999999999994 7999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..++|.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 248 ~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~---- 315 (461)
T PHA03211 248 TYLGARL-----RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS---- 315 (461)
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccc----
Confidence 8886543 358999999999999999999999 8999999999999999999999999999986532110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc----
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE---- 643 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~---- 643 (714)
........||..|+|||++.+..++.++|||||||++|||++|..|+.......
T Consensus 316 ----------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~ 373 (461)
T PHA03211 316 ----------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRP 373 (461)
T ss_pred ----------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCC
Confidence 001123457899999999999999999999999999999999987764332111
Q ss_pred --chhHHHHHHHHhhcCCcccc----------------cCCCCCC-CCC-cHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 644 --MDLVNWMQLCIEEKKPLADV----------------LDPYLAP-DAD-KEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 644 --~~l~~~~~~~~~~~~~~~~~----------------~d~~~~~-~~~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
..+...++........+... ..+.... ... .......+.+|+.+||+.||.+|||+.|++
T Consensus 374 ~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL 453 (461)
T PHA03211 374 YDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELL 453 (461)
T ss_pred cHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHh
Confidence 11222221110000000000 0000000 000 001112577899999999999999999998
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 454 ~ 454 (461)
T PHA03211 454 R 454 (461)
T ss_pred h
Confidence 6
No 187
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.5e-37 Score=330.01 Aligned_cols=257 Identities=20% Similarity=0.324 Sum_probs=189.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC-----ceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-----EKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lV~e~ 480 (714)
+.||+|+||.||++... +|+.||||++... .....+.+.+|+++++.++||||+++++++...+ ..|+||||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 85 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTEL 85 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeec
Confidence 47999999999999974 6899999998753 2234467889999999999999999999998766 78999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+. ++|.+.+... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~-~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 86 MQ-SDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred cc-cCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 96 5888887654 458999999999999999999999 8999999999999999999999999999875432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. ........+|+.|+|||.+.+. .++.++|||||||++|||++|+.||...
T Consensus 156 ~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 156 DE---------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred Cc---------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 11 0011223457889999999774 4799999999999999999999999433
Q ss_pred CCCcchhHHHHHHHHhhcC---------Cccc-cc-CCCCCCCC-----CcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKK---------PLAD-VL-DPYLAPDA-----DKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~---------~~~~-~~-d~~~~~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
.. .+....+........ .... +. .+...+.. .......++.+++.+||+.||++|||++|++
T Consensus 209 ~~--~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 286 (372)
T cd07853 209 SP--IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADAL 286 (372)
T ss_pred CH--HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHh
Confidence 21 111111110000000 0000 00 00000000 0001133678999999999999999999998
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 287 ~ 287 (372)
T cd07853 287 A 287 (372)
T ss_pred c
Confidence 5
No 188
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.6e-36 Score=316.21 Aligned_cols=257 Identities=23% Similarity=0.330 Sum_probs=196.6
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|..++ +..||+|.+..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 91 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELM 91 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCC
Confidence 479999999999997542 45899999875532 23356889999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCC----CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 482 PNGSLATALHGKPGM----VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
++|+|.+++...... ......++..+.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.
T Consensus 92 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L~Dfg~~~~ 168 (288)
T cd05061 92 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 168 (288)
T ss_pred CCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEECcCCcccc
Confidence 999999999753211 011345778899999999999999999 8999999999999999999999999999875
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... ........++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 169 ~~~~~~--------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~ 222 (288)
T cd05061 169 IYETDY--------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 222 (288)
T ss_pred cccccc--------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCC
Confidence 432110 000111223566999999998899999999999999999999 78888
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.... . .+.......... +.... .....+.+++.+||+.||++|||+.++++.|++...
T Consensus 223 ~~~~--~---~~~~~~~~~~~~-------~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 223 QGLS--N---EQVLKFVMDGGY-------LDQPD-----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred CCCC--H---HHHHHHHHcCCC-------CCCCC-----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 4321 1 122221111111 00111 112468899999999999999999999999998543
No 189
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-36 Score=309.26 Aligned_cols=248 Identities=26% Similarity=0.375 Sum_probs=196.8
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|+||.||++...+++.||+|.+...... ..+.+.+|++++++++|+||+++++++...+..++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 69999999999999877999999998765443 45679999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.+++.||+|||+ ++++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~----- 148 (251)
T cd05041 82 FLRKKK-----NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY----- 148 (251)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc-----
Confidence 997543 347889999999999999999999 8999999999999999999999999999875431100
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||.+.+..++.++|||||||++|||+| |..||..... ...
T Consensus 149 ---------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~- 204 (251)
T cd05041 149 ---------------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQT- 204 (251)
T ss_pred ---------------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHH-
Confidence 000011122456999999988899999999999999999999 8888843221 111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
... ...... .... .....++.+++.+||..+|++|||+.|+++.|++
T Consensus 205 --~~~-~~~~~~------~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 205 --RER-IESGYR------MPAP-----QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred --HHH-HhcCCC------CCCC-----ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 111 111100 0000 1123468899999999999999999999999863
No 190
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.1e-36 Score=311.95 Aligned_cols=255 Identities=22% Similarity=0.317 Sum_probs=188.0
Q ss_pred cccccCceEEEEEEECC---CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLED---GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||+|...+ ...+|+|.+..... .....|.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 35788888765432 334578899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++....... ....++...+.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 82 L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 155 (269)
T cd05042 82 LKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-- 155 (269)
T ss_pred HHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchh--
Confidence 999997653211 1235678889999999999999999 8999999999999999999999999999864321100
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-------CCCCCchhhhHHHHHHHHHHHh-CCCccc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-------VVKPSQKWDIYSYGVILLEMIT-GRTAVV 637 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~~DVwS~Gvvl~ellt-G~~p~~ 637 (714)
........++..|+|||++. ...++.++|||||||++|||++ |..||.
T Consensus 156 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (269)
T cd05042 156 ------------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYP 211 (269)
T ss_pred ------------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCC
Confidence 00112223456799999874 2356889999999999999999 777874
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.... .+ .......... ....++..... ....+.+++..|| .||++|||+++|++.|.
T Consensus 212 ~~~~--~~---~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 212 DLSD--EQ---VLKQVVREQD--IKLPKPQLDLK-----YSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCH--HH---HHHHHhhccC--ccCCCCccccc-----CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 3211 11 1111111111 11122222211 2235677888999 59999999999999873
No 191
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.6e-37 Score=313.24 Aligned_cols=248 Identities=26% Similarity=0.433 Sum_probs=197.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|+||+++++++......++||||+++++|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 90 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD 90 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHH
Confidence 47999999999999988888999999886433 34679999999999999999999999998889999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++....+ ..+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++.......
T Consensus 91 ~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~----- 158 (261)
T cd05034 91 FLKSGEG----KKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY----- 158 (261)
T ss_pred HHhcccc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhh-----
Confidence 9976532 358999999999999999999999 8999999999999999999999999999876532100
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ....
T Consensus 159 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~- 213 (261)
T cd05034 159 ----------------------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--NREV- 213 (261)
T ss_pred ----------------------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHH-
Confidence 00011112456999999998889999999999999999999 999984321 1111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
....... .. ...... ....+.+++.+||..+|++||+++++.+.|+.
T Consensus 214 --~~~~~~~-~~------~~~~~~-----~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 214 --LEQVERG-YR------MPRPPN-----CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --HHHHHcC-CC------CCCCCC-----CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111111 00 000001 12368899999999999999999999999875
No 192
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-36 Score=320.23 Aligned_cols=258 Identities=24% Similarity=0.374 Sum_probs=198.1
Q ss_pred cccccccCceEEEEEEEC--------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLE--------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 477 (714)
.+.||+|+||.||+|... ....||+|.++... ......+.+|+++++++ +||||+++++++...+..++|
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVI 96 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEE
Confidence 468999999999999752 24579999987643 23346788999999999 699999999999988899999
Q ss_pred EeccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 478 YDYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|||+++|+|.+++...... .....+++.++++++.|++.||+|||+ ++|+||||||+||++++++.+
T Consensus 97 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~ 173 (314)
T cd05099 97 VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVTEDNVM 173 (314)
T ss_pred EecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEcCCCcE
Confidence 9999999999999754210 112458999999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|
T Consensus 174 kL~Dfg~~~~~~~~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 227 (314)
T cd05099 174 KIADFGLARGVHDIDYY--------------------------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMW 227 (314)
T ss_pred EEccccccccccccccc--------------------------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHH
Confidence 99999999865321100 0001112245699999998888999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||++ |+.||.... ..++.+ .. ..... ..... ....++.+++.+||+.+|++|||+.|+++.|
T Consensus 228 el~~~g~~p~~~~~--~~~~~~---~~-~~~~~------~~~~~-----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 228 EIFTLGGSPYPGIP--VEELFK---LL-REGHR------MDKPS-----NCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred HHHhCCCCCCCCCC--HHHHHH---HH-HcCCC------CCCCC-----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 9999 888884321 111221 11 11110 00111 1223677999999999999999999999999
Q ss_pred hhhhc
Q 005102 707 DRLIV 711 (714)
Q Consensus 707 ~~i~~ 711 (714)
+++..
T Consensus 291 ~~~~~ 295 (314)
T cd05099 291 DKVLA 295 (314)
T ss_pred HHHHH
Confidence 98864
No 193
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.5e-36 Score=312.72 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=192.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||+|.+. ++..||+|.+........+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 47999999999999965 47889999988766666678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhhhhccCCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
+++...... ...++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||++.......
T Consensus 94 ~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---- 163 (268)
T cd06624 94 ALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---- 163 (268)
T ss_pred HHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC----
Confidence 999754211 112788899999999999999999 89999999999999986 6789999999987542110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC--CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK--PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||++.+.. ++.++||||||+++|||++|+.||........
T Consensus 164 ------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~ 219 (268)
T cd06624 164 ------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA 219 (268)
T ss_pred ------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh
Confidence 0011223577899999986644 78999999999999999999999954322111
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+...... ..+.+.. ....++.+++.+||+.+|++|||+.|+++
T Consensus 220 --~~~~~~~~~--------~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 220 --AMFKVGMFK--------IHPEIPE-----SLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --hHhhhhhhc--------cCCCCCc-----ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111100000 0111111 12235789999999999999999999875
No 194
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.8e-37 Score=321.07 Aligned_cols=257 Identities=21% Similarity=0.300 Sum_probs=190.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|++++++++||||+++++++...+..++||||+++ +|
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 90 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DL 90 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CH
Confidence 47999999999999976 478899999875432 2234678899999999999999999999999999999999975 88
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 91 ~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 158 (309)
T cd07872 91 KQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT---- 158 (309)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCc----
Confidence 88886543 347889999999999999999999 899999999999999999999999999987532110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||..... .+
T Consensus 159 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~--~~ 212 (309)
T cd07872 159 ------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV--ED 212 (309)
T ss_pred ------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HH
Confidence 01112345788999999865 4589999999999999999999999953322 11
Q ss_pred hHHHHHHHHhhcC--------C---cccccCCCCCCCC---CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK--------P---LADVLDPYLAPDA---DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~--------~---~~~~~d~~~~~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ . ....-.+...+.. .......++.+++.+||+.||++|||++|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 213 ELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 1111111110000 0 0000000000000 00012235779999999999999999999886
No 195
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.7e-37 Score=330.66 Aligned_cols=246 Identities=22% Similarity=0.274 Sum_probs=189.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+++... ++.||+|.+.+. .....+.+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg 128 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG 128 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCC
Confidence 579999999999999864 789999998652 2223356889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... .+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+......
T Consensus 129 ~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~-- 196 (370)
T cd05621 129 DLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-- 196 (370)
T ss_pred cHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--
Confidence 999998643 37888999999999999999999 899999999999999999999999999997643211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC----CCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK----PSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
........||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 197 -------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 197 -------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred -------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 01122345799999999986543 7889999999999999999999995321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISDA 705 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 705 (714)
..............+ ...... .....+.+++..|+..++.+ |||++|+++.
T Consensus 252 -----~~~~~~~i~~~~~~~------~~p~~~---~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 252 -----LVGTYSKIMDHKNSL------NFPEDV---EISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -----HHHHHHHHHhCCccc------CCCCcc---cCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 112222222211110 011111 11234668888999755543 8899998763
No 196
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.7e-37 Score=333.40 Aligned_cols=272 Identities=20% Similarity=0.243 Sum_probs=192.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +++.||||++.+.. ......+.+|++++++++||||+++++.+.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g 86 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG 86 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999975 48999999987532 223456889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 87 ~L~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 87 DMMSLLIRL------GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999765 357888999999999999999999 89999999999999999999999999998644211110
Q ss_pred CCccCCCCCCC---Cchhh------------hcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHH
Q 005102 565 PTLQSNRMPAE---KPQER------------QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 565 ~~~~~~~~~~~---~~~~~------------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~el 629 (714)
........... .+... .................||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 00000000000 00000 0000000001112245789999999999999999999999999999999
Q ss_pred HhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC---CHHHHHH
Q 005102 630 ITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP---TMRHISD 704 (714)
Q Consensus 630 ltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP---t~~evl~ 704 (714)
++|+.||..... .+........... ...+. .. .....+.+++.+|+ .+|.+|+ |+.|+++
T Consensus 238 l~G~~Pf~~~~~-----~~~~~~i~~~~~~---~~~~~---~~---~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 238 LVGQPPFLADTP-----AETQLKVINWETT---LHIPS---QA---KLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhCCCCCCCCCH-----HHHHHHHhccCcc---ccCCC---CC---CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 999999953321 1111111111100 00010 00 11224667777766 5999999 8888764
No 197
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.4e-37 Score=332.18 Aligned_cols=221 Identities=22% Similarity=0.289 Sum_probs=169.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg 86 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 86 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCC
Confidence 47999999999999975 48899999997642 223457889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 87 DMMSLLIRM------GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999998754 347889999999999999999999 89999999999999999999999999998644211110
Q ss_pred CCccCCCCCCCCch----------h---------hhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 565 PTLQSNRMPAEKPQ----------E---------RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 565 ~~~~~~~~~~~~~~----------~---------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.............. . ..................||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00000000000000 0 0000000000111234568999999999999999999999999999
Q ss_pred HHHHHhCCCcccc
Q 005102 626 LLEMITGRTAVVQ 638 (714)
Q Consensus 626 l~elltG~~p~~~ 638 (714)
+|||++|+.||..
T Consensus 238 l~elltG~~Pf~~ 250 (382)
T cd05625 238 LYEMLVGQPPFLA 250 (382)
T ss_pred HHHHHhCCCCCCC
Confidence 9999999999953
No 198
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.3e-36 Score=317.44 Aligned_cols=244 Identities=21% Similarity=0.336 Sum_probs=192.7
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|+||.||+|+... ++.||+|.+........+.+.+|++++++++||||+++++++...+..++||||+++++|..
T Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~ 98 (292)
T cd06644 19 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDA 98 (292)
T ss_pred eecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHH
Confidence 69999999999999865 89999999987766667789999999999999999999999999999999999999999998
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~------- 163 (292)
T cd06644 99 IMLELD-----RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT------- 163 (292)
T ss_pred HHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccc-------
Confidence 876543 358999999999999999999999 89999999999999999999999999987643211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........++..|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 164 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-- 220 (292)
T cd06644 164 ---------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-- 220 (292)
T ss_pred ---------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--
Confidence 00111223577899999984 34568899999999999999999999843211
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+........ +.... .......+.+++.+||+.||++||+++++++
T Consensus 221 ---~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 221 ---MRVLLKIAKSEP-------PTLSQ---PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---HHHHHHHhcCCC-------ccCCC---CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111111111110 11100 0112235789999999999999999999975
No 199
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=338.41 Aligned_cols=256 Identities=21% Similarity=0.322 Sum_probs=182.8
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeC--------CceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--------DEKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~~~lV~ 478 (714)
.+.||+|+||.||+|... +++.||||++.... ....+|+.+|++++||||+++++++... ...++||
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 357999999999999975 58899999886532 2345799999999999999999987542 1356899
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARL 557 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~ 557 (714)
||+++ +|.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+|+.
T Consensus 147 E~~~~-~l~~~~~~~~~~--~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYARN--NHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred ecCCc-cHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 99975 777766432111 1468999999999999999999999 8999999999999999664 799999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
+.... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||
T Consensus 221 ~~~~~-----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 221 LLAGQ-----------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred ccCCC-----------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 53211 11123468889999998764 6899999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhc---------CCcccccCCCCCCC-C---CcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEK---------KPLADVLDPYLAPD-A---DKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~d~~~~~~-~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
...... ..+...++. .... ....++.-+..... . .......++.+++.+||..||.+|||+.|++
T Consensus 272 ~~~~~~-~~~~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 272 SGQSSV-DQLVRIIQV-LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCCChH-HHHHHHHHH-hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 532211 111111111 0000 00000000000000 0 0001224688999999999999999999987
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 350 ~ 350 (440)
T PTZ00036 350 A 350 (440)
T ss_pred C
Confidence 3
No 200
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.9e-36 Score=314.63 Aligned_cols=258 Identities=26% Similarity=0.385 Sum_probs=199.6
Q ss_pred ccccccCceEEEEEEEC-----CCcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-----DGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~ 480 (714)
+.||+|+||.||+|.+. ++..||||++...... ..+.|.+|++++++++||||+++++++.. ....++||||
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY 89 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEec
Confidence 47999999999999864 3689999999866443 45789999999999999999999999887 5578999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 90 LPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred CCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 99999999997653 358999999999999999999999 8999999999999999999999999999986542
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.... ........++..|+|||.+.+..++.++||||||+++|||+||+.|+....
T Consensus 162 ~~~~-------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 162 DKDY-------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred CCcc-------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 2110 000111223456999999988899999999999999999999999984432
Q ss_pred CCcch---------hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 641 SSEMD---------LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 641 ~~~~~---------l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
..... ....+......... ... ......++.+++.+||+.+|++||||.||+++|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 217 AEFLRMIGIAQGQMIVTRLLELLKEGER--------LPR---PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred chhccccccccccccHHHHHHHHHcCCc--------CCC---CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 22111 01111111111110 000 0112246889999999999999999999999999873
No 201
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.1e-37 Score=332.36 Aligned_cols=273 Identities=21% Similarity=0.260 Sum_probs=192.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||++... +++.||||++.+.. ....+.+.+|++++++++||||+++++++.+.+..|+||||+++|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg 86 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGG 86 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCC
Confidence 47999999999999875 58999999986532 233467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 87 DLMTMLIKY------DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999754 458899999999999999999999 89999999999999999999999999999744221100
Q ss_pred CCcc---CCCCCCCC----------------chhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 565 PTLQ---SNRMPAEK----------------PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 565 ~~~~---~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.... ........ .....................||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0000 00000000 0000000000000001113468999999999998899999999999999
Q ss_pred HHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCC---CCHHHH
Q 005102 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKR---PTMRHI 702 (714)
Q Consensus 626 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R---Pt~~ev 702 (714)
+|||+||+.||..... .+...........+ ...... .....+.+++.+|+. +|.+| +|+.|+
T Consensus 238 l~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~------~~p~~~---~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 238 MFECLIGWPPFCSENS-----HETYRKIINWRETL------YFPDDI---HLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred hhhhhcCCCCCCCCCH-----HHHHHHHHccCCcc------CCCCCC---CCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 9999999999943221 11111111111100 011100 112357789999997 67765 599888
Q ss_pred HHH
Q 005102 703 SDA 705 (714)
Q Consensus 703 l~~ 705 (714)
++.
T Consensus 303 l~h 305 (377)
T cd05629 303 KSH 305 (377)
T ss_pred hcC
Confidence 753
No 202
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-36 Score=316.42 Aligned_cols=246 Identities=22% Similarity=0.222 Sum_probs=191.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||++... +++.||+|.+..... .....+.+|++++++++|+||+++++++...+..++||||++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG 85 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence 47999999999999875 588999999875422 22345788999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 86 ~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05632 86 DLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--- 155 (285)
T ss_pred cHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC---
Confidence 99988865422 358999999999999999999999 89999999999999999999999999988653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 156 --------------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~ 208 (285)
T cd05632 156 --------------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-V 208 (285)
T ss_pred --------------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 0111234688899999999889999999999999999999999999532211 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
....+... ..... ...... ....+.+++.+||+.||++||+ +++++.
T Consensus 209 ~~~~~~~~-~~~~~-------~~~~~~-----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 209 KREEVDRR-VLETE-------EVYSAK-----FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HHHHHHHh-hhccc-------cccCcc-----CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 11111111 11110 001111 1235778999999999999999 556554
No 203
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.7e-36 Score=315.97 Aligned_cols=254 Identities=24% Similarity=0.384 Sum_probs=196.3
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
..||+|+||.||+|... ++..||+|.+..... ...++|.+|+.++++++||||+++++++...+..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYM 90 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecC
Confidence 47999999999999864 467899999876533 33467999999999999999999999999989999999999
Q ss_pred CCCCHhhhhhCCCCC----------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC
Q 005102 482 PNGSLATALHGKPGM----------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM 545 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~ 545 (714)
++|+|.+++...... .....+++.+++.++.|++.||+|||+ ++++||||||+||++++++
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~nil~~~~~ 167 (288)
T cd05050 91 AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENM 167 (288)
T ss_pred CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhheEecCCC
Confidence 999999999743210 111357889999999999999999999 8999999999999999999
Q ss_pred CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 546 EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 546 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.+||+|||+++....... .........+..|+|||.+.+..++.++|||||||+
T Consensus 168 ~~~l~dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 221 (288)
T cd05050 168 VVKIADFGLSRNIYSADY--------------------------YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVV 221 (288)
T ss_pred ceEECccccceecccCcc--------------------------ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHH
Confidence 999999999875432110 000111122456999999988899999999999999
Q ss_pred HHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 626 LLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 626 l~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+|||++ |..||.... ..+...... .... . .... ....++.+++.+||+.||++|||+.|+++
T Consensus 222 l~el~~~~~~p~~~~~-----~~~~~~~~~-~~~~-~-----~~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 222 LWEIFSYGMQPYYGMA-----HEEVIYYVR-DGNV-L-----SCPD-----NCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHhCCCCCCCCCC-----HHHHHHHHh-cCCC-C-----CCCC-----CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 999998 888884321 122222211 1110 0 0011 12246889999999999999999999999
Q ss_pred HHhh
Q 005102 705 ALDR 708 (714)
Q Consensus 705 ~L~~ 708 (714)
.|++
T Consensus 285 ~l~~ 288 (288)
T cd05050 285 ILQR 288 (288)
T ss_pred HhhC
Confidence 9874
No 204
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-36 Score=326.70 Aligned_cols=255 Identities=21% Similarity=0.330 Sum_probs=186.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 479 (714)
+.||+|+||.||++... +|+.||||++... .......+.+|+.+++.++||||+++++++...+ ..|+|||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 106 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME 106 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEe
Confidence 47999999999999975 4899999998754 2333467889999999999999999999986543 4699999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++ +|.+.++ ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 107 ~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 107 LMDA-NLCQVIH--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred CCCc-CHHHHHh--------ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 9965 6776664 237888999999999999999999 899999999999999999999999999987432
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 175 ~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 175 TN-----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cC-----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 11 0112234688899999999999999999999999999999999999533
Q ss_pred CCCcc-------------hhHHH----HHHHHhhcCCc-----ccccCCCCCCCC--CcHHHHHHHHHHHhHccCCCCCC
Q 005102 640 GSSEM-------------DLVNW----MQLCIEEKKPL-----ADVLDPYLAPDA--DKEEEIIAVLKIAMACVHSSPEK 695 (714)
Q Consensus 640 ~~~~~-------------~l~~~----~~~~~~~~~~~-----~~~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~ 695 (714)
...+. ..... +.......... .+.......+.. ........+.+++.+||..||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 305 (359)
T cd07876 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDK 305 (359)
T ss_pred CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCccc
Confidence 21100 00000 00000000000 000000000000 00012345789999999999999
Q ss_pred CCCHHHHHH
Q 005102 696 RPTMRHISD 704 (714)
Q Consensus 696 RPt~~evl~ 704 (714)
|||+.|+++
T Consensus 306 R~t~~e~l~ 314 (359)
T cd07876 306 RISVDEALR 314 (359)
T ss_pred CCCHHHHhc
Confidence 999999986
No 205
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.3e-36 Score=346.61 Aligned_cols=275 Identities=23% Similarity=0.260 Sum_probs=200.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +|+.||+|++.... ....++|.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGG 87 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGY 87 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCC
Confidence 47999999999999976 48999999997542 223467999999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCC-----CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 485 SLATALHGKPGM-----VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 485 sL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
+|.+++...... .....+++..+++++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 88 SL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~ 164 (932)
T PRK13184 88 TLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKK 164 (932)
T ss_pred CHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecCcceecc
Confidence 999998642110 001346788899999999999999999 899999999999999999999999999998763
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.............. ..............||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 165 ~~~~~~~~l~~~~~----------~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 165 LEEEDLLDIDVDER----------NICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred cccccccccccccc----------cccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 21110000000000 00000011223356899999999999999999999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHhhhhc
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-TMRHISDALDRLIV 711 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~ 711 (714)
..... ... .. ..++.... ........+.+++.+||+.||++|| +++++++.|+....
T Consensus 235 ~~~ki-----~~~---~~-----i~~P~~~~--p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 235 KGRKI-----SYR---DV-----ILSPIEVA--PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred chhhh-----hhh---hh-----ccChhhcc--ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11111 000 00 00110000 0011223578899999999999995 77888888887643
No 206
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-36 Score=313.33 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=195.2
Q ss_pred cccccCceEEEEEEECC-------CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLED-------GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
.||+|+||.||+|+..+ +..+|+|.+.... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 68999999999998753 2579999886543 234567899999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-----CeEEcccchh
Q 005102 482 PNGSLATALHGKPGMV-SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-----EPHVSDFGLA 555 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-----~~kl~DFGla 555 (714)
++|+|.+++....... ....+++.+++.++.|++.||+|||+ .+++|+||||+||+++.++ .+|++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999997532110 11347899999999999999999999 8999999999999999877 8999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~ 634 (714)
+....... ........++..|+|||++.+..++.++|||||||++|||+| |+.
T Consensus 159 ~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~ 212 (269)
T cd05044 159 RDIYKSDY--------------------------YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQ 212 (269)
T ss_pred cccccccc--------------------------cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCC
Confidence 75432110 000111223567999999999999999999999999999998 999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
||.... ..+....+ ...... ... ......+.+++.+||..+|++||+++++++.|++
T Consensus 213 p~~~~~--~~~~~~~~----~~~~~~------~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 213 PYPALN--NQEVLQHV----TAGGRL------QKP-----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCcccC--HHHHHHHH----hcCCcc------CCc-----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 984321 11111111 111100 000 1123467899999999999999999999999874
No 207
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-36 Score=311.58 Aligned_cols=247 Identities=26% Similarity=0.476 Sum_probs=195.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||++...++..+|+|.+.... .....|.+|++++++++|+||+++++++.. ...+++|||+++|+|.+
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~ 89 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLD 89 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHH
Confidence 4799999999999998888889999887643 234678999999999999999999999877 77899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++..... ..+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.++.......
T Consensus 90 ~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----- 157 (260)
T cd05073 90 FLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----- 157 (260)
T ss_pred HHHhCCc----cccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-----
Confidence 9976432 457899999999999999999999 8999999999999999999999999999875432110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||++....++.++|||||||++||++| |+.||.... ..++.
T Consensus 158 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~ 213 (260)
T cd05073 158 ----------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVI 213 (260)
T ss_pred ----------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHH
Confidence 00111223566999999988889999999999999999999 899984321 11122
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.+. ...... + .. .....++.+++.+||+.+|++||++.++.+.|+.
T Consensus 214 ~~~----~~~~~~-----~-~~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 214 RAL----ERGYRM-----P-RP-----ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHH----hCCCCC-----C-Cc-----ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111 111110 0 00 1122368899999999999999999999999975
No 208
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.9e-36 Score=318.71 Aligned_cols=257 Identities=23% Similarity=0.303 Sum_probs=193.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||++... ++..+|+|.+.... .....++.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L 86 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 86 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcH
Confidence 47999999999999975 47889999887543 23345688999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.++++.. ..+++..+..++.|++.||.|||+. .+++||||||+||++++++.+||+|||++......
T Consensus 87 ~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 153 (308)
T cd06615 87 DQVLKKA------GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 153 (308)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc-----
Confidence 9999755 4588999999999999999999972 38999999999999999999999999988654211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
......++..|+|||.+.+..++.++|||||||++|||++|+.||.... ....
T Consensus 154 -------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~ 206 (308)
T cd06615 154 -------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKEL 206 (308)
T ss_pred -------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhH
Confidence 0112346778999999988889999999999999999999999984322 1111
Q ss_pred HHHHHHHHhhcCCc-------------------ccccCC---CCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIEEKKPL-------------------ADVLDP---YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~-------------------~~~~d~---~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+........... .+..+. ...+..........+.+++.+||..||++|||++|+++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 286 (308)
T cd06615 207 EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286 (308)
T ss_pred HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111000000000 000000 00000000012335889999999999999999999886
Q ss_pred H
Q 005102 705 A 705 (714)
Q Consensus 705 ~ 705 (714)
.
T Consensus 287 ~ 287 (308)
T cd06615 287 H 287 (308)
T ss_pred C
Confidence 4
No 209
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=327.97 Aligned_cols=248 Identities=25% Similarity=0.390 Sum_probs=200.6
Q ss_pred ccccccCceEEEEEEECC--C--cEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED--G--HTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
++||+|.||.|++|.|.. | ..||||.++..... ...+|.+|+.+|.+++|||++++||...+ ....||||.++.
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELapl 194 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPL 194 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhccc
Confidence 479999999999999864 4 46899999876544 56899999999999999999999999987 678999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+.|++... ..|.......++.|||.||.||.+ +++|||||..+|+|+-..-.+||+|||+.+.+...+.
T Consensus 195 GSLldrLrka~~----~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 195 GSLLDRLRKAKK----AILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred chHHHHHhhccc----cceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999987322 457788889999999999999999 9999999999999999988999999999998876655
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~ 642 (714)
.+.+...+. -.+.|.|||.+...+++.++|||+|||++|||+| |..||... .
T Consensus 268 ~Yvm~p~rk-------------------------vPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~--~ 320 (1039)
T KOG0199|consen 268 MYVMAPQRK-------------------------VPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC--R 320 (1039)
T ss_pred ceEecCCCc-------------------------CcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC--C
Confidence 444332221 1345999999999999999999999999999999 78888432 2
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
..++.+.+ .++. ++. ..+.+.+.++++|..||..+|++|||+.+|.+.+
T Consensus 321 g~qIL~~i----D~~e--------rLp---RPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 321 GIQILKNI----DAGE--------RLP---RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHHhc----cccc--------cCC---CCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 22222111 1111 111 1123566899999999999999999999997443
No 210
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=324.90 Aligned_cols=244 Identities=20% Similarity=0.311 Sum_probs=198.3
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||.|+||.||+|..++ +-..|.|++........++|.-||+||..++||+||++++.|+..+.++++.|||.||-...
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDa 118 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDA 118 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhH
Confidence 48899999999999776 45567788887777788999999999999999999999999999999999999999999988
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++-+-. ..|++.++..+++|++.||.|||+ ..|||||||+.|||++-+|.++|+|||.+.....
T Consensus 119 imlEL~-----r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-------- 182 (1187)
T KOG0579|consen 119 IMLELG-----RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-------- 182 (1187)
T ss_pred HHHHhc-----cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchh--------
Confidence 776543 569999999999999999999999 9999999999999999999999999998753211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
......++.||++|||||+.. ..+|++++|||||||+|.||..+.+|....
T Consensus 183 --------------------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel---- 238 (1187)
T KOG0579|consen 183 --------------------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL---- 238 (1187)
T ss_pred --------------------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc----
Confidence 123445678999999999874 578999999999999999999999987322
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.....+..+.+... |.+. .+......+.+++.+||.+||+.||+++++++
T Consensus 239 -npMRVllKiaKSeP-------PTLl---qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 239 -NPMRVLLKIAKSEP-------PTLL---QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -chHHHHHHHhhcCC-------Cccc---CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11222211111111 1111 12234457889999999999999999999875
No 211
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.3e-36 Score=316.14 Aligned_cols=246 Identities=23% Similarity=0.242 Sum_probs=192.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
++||+|+||.||++... +++.||||.+..... ...+.+.+|+.++++++|++|+++++.+...+..++||||+++|
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 85 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 85 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence 47999999999999976 589999999875422 22345778999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++.++..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++.......
T Consensus 86 ~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 86 DLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 99998865432 358899999999999999999999 899999999999999999999999999986532110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 157 ---------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~ 209 (285)
T cd05630 157 ---------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 209 (285)
T ss_pred ---------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch
Confidence 11123468889999999998999999999999999999999999953321110
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
. .......... . ...... ....+.+++.+||+.||++||| ++|+++
T Consensus 210 -~-~~~~~~~~~~---~----~~~~~~-----~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 210 -R-EEVERLVKEV---Q----EEYSEK-----FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -H-HHHHhhhhhh---h----hhcCcc-----CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0 1111111110 0 011111 1225779999999999999999 778775
No 212
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.7e-36 Score=310.26 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=197.0
Q ss_pred cccccccCceEEEEEEECCC----cEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLEDG----HTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|.+.+. ..||||...... ....+.+.+|+.++++++||||+++++++.. +..++||||++
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~ 89 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAP 89 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCC
Confidence 35799999999999987542 468999887654 3445689999999999999999999999865 56789999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 90 LGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 999999997543 348999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. .......++..|+|||.+....++.++||||||+++|||++ |+.||.....
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~ 214 (270)
T cd05056 162 Y---------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN 214 (270)
T ss_pred c---------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 0 00011123456999999988889999999999999999996 9999943321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.+....+ ...... ..... ....+.+++.+||..+|++|||+.++++.|+++...
T Consensus 215 --~~~~~~~----~~~~~~------~~~~~-----~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 215 --NDVIGRI----ENGERL------PMPPN-----CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --HHHHHHH----HcCCcC------CCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111 111110 01111 223688999999999999999999999999998754
No 213
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.9e-36 Score=309.60 Aligned_cols=248 Identities=21% Similarity=0.327 Sum_probs=193.9
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC-----chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-----SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
.+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 86 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYM 86 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEEC
Confidence 358999999999999975 58999999986532 122357889999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++++|.+++... ..+++..+.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 87 ~~~~l~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 87 PGGSVKDQLKAY------GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred CCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999998754 357889999999999999999999 89999999999999999999999999998754321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
... ........++..|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 212 (263)
T cd06625 158 CSS-------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA 212 (263)
T ss_pred ccc-------------------------cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch
Confidence 000 0001123356789999999998899999999999999999999999843211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
... ......... .+.... .....+.+++.+||..+|++|||+.|+++.
T Consensus 213 ----~~~-~~~~~~~~~------~~~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 213 ----MAA-IFKIATQPT------NPQLPS-----HVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----HHH-HHHHhccCC------CCCCCc-----cCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 111 111111100 111111 122357899999999999999999999763
No 214
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.2e-36 Score=314.21 Aligned_cols=244 Identities=23% Similarity=0.358 Sum_probs=189.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeC------CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSV------DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------~~~~lV~e~ 480 (714)
+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++.++ +||||+++++++... ...++||||
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 90 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 90 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence 36999999999999975 48899999987543 2346788999999999 799999999998753 357899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++....
T Consensus 91 ~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 91 CGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 163 (272)
T ss_pred CCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCceeccc
Confidence 999999999876432 458899999999999999999999 8999999999999999999999999999875432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.. .......|+..|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 164 ~~----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p 215 (272)
T cd06637 164 TV----------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 215 (272)
T ss_pred cc----------------------------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 10 1112334678899999986 34578899999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|..... ...... .... . .+..... .....+.+++.+||..||.+|||+.++++
T Consensus 216 ~~~~~~----~~~~~~-~~~~--~-----~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 216 LCDMHP----MRALFL-IPRN--P-----APRLKSK----KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ccccCH----HHHHHH-HhcC--C-----CCCCCCC----CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 943211 111111 0000 0 0111110 12236789999999999999999999875
No 215
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=317.60 Aligned_cols=243 Identities=20% Similarity=0.360 Sum_probs=194.7
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHH
Confidence 4699999999999986 458999999997665555678899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~----- 169 (296)
T cd06655 105 DVVTET-------CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ----- 169 (296)
T ss_pred HHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccccc-----
Confidence 988643 48899999999999999999999 899999999999999999999999999987543211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .
T Consensus 170 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----~ 221 (296)
T cd06655 170 -----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----L 221 (296)
T ss_pred -----------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----H
Confidence 011123467789999999988899999999999999999999999943321 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
........... .....+ ......+.+++.+||..||++|||+.+++.
T Consensus 222 ~~~~~~~~~~~--~~~~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 222 RALYLIATNGT--PELQNP--------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHhcCC--cccCCc--------ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 11111111111 000011 112235778999999999999999999874
No 216
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.9e-36 Score=309.60 Aligned_cols=243 Identities=23% Similarity=0.388 Sum_probs=194.8
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|...+ ++.+|+|.+..... .+++.+|++++++++||||+++++++......+++|||+++++|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 86 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVS 86 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHH
Confidence 369999999999999876 78999999876533 578999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||++........
T Consensus 87 ~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---- 154 (256)
T cd06612 87 DIMKITN-----KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---- 154 (256)
T ss_pred HHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc----
Confidence 9986543 458999999999999999999999 8999999999999999999999999999886532110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
......++..|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--- 207 (256)
T cd06612 155 ------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--- 207 (256)
T ss_pred ------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh---
Confidence 11122356779999999988999999999999999999999999953321110
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.. .... ..+... ........+.+++.+||+.||++|||+.|+++
T Consensus 208 --~~~-~~~~------~~~~~~---~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 208 --IFM-IPNK------PPPTLS---DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --hhh-hccC------CCCCCC---chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000 0000 001110 01112246889999999999999999999875
No 217
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-36 Score=321.13 Aligned_cols=200 Identities=25% Similarity=0.378 Sum_probs=159.4
Q ss_pred cccccccCceEEEEEEECC---CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED---GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~~ 482 (714)
+..||+|+||+||+|+.++ +..||+|.+..... ...+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3579999999999999754 57899999876432 2467899999999999999999999864 456789999986
Q ss_pred CCCHhhhhhCCCC---CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----CCCCCeEEcccchh
Q 005102 483 NGSLATALHGKPG---MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLA 555 (714)
Q Consensus 483 ~gsL~~~l~~~~~---~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla 555 (714)
+ +|.+++..... ......+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 4 88887753211 1111358899999999999999999999 899999999999999 56679999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
+........ ........||+.|+|||++.+. .++.++|||||||++|||+||+.
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~ 214 (317)
T cd07867 160 RLFNSPLKP-------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 214 (317)
T ss_pred eccCCCccc-------------------------ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCC
Confidence 865322100 0111234568889999998764 57999999999999999999999
Q ss_pred cccc
Q 005102 635 AVVQ 638 (714)
Q Consensus 635 p~~~ 638 (714)
||..
T Consensus 215 ~f~~ 218 (317)
T cd07867 215 IFHC 218 (317)
T ss_pred Cccc
Confidence 9953
No 218
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-36 Score=316.85 Aligned_cols=243 Identities=21% Similarity=0.349 Sum_probs=194.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHH
Confidence 47999999999999964 68999999998765555677899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~----- 169 (297)
T cd06656 105 DVVTET-------CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 169 (297)
T ss_pred HHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-----
Confidence 998643 47889999999999999999999 899999999999999999999999999987543211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......+++.|+|||.+.+..++.++|||||||++|+|++|+.||........ +
T Consensus 170 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-~- 224 (297)
T cd06656 170 -----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L- 224 (297)
T ss_pred -----------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-e-
Confidence 011123457789999999988899999999999999999999999943221110 0
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ...... .+... ........+.+++.+||+.+|++||+++++++
T Consensus 225 --~-~~~~~~-------~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 225 --Y-LIATNG-------TPELQ---NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred --e-eeccCC-------CCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000000 00000 01112235778999999999999999999987
No 219
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=310.85 Aligned_cols=264 Identities=25% Similarity=0.318 Sum_probs=204.1
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc--CCCCccceEEEEEeCC----ceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI--RHSNIVTLRAYYWSVD----EKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~----~~~lV~e~~ 481 (714)
.+.||+|.||+||+|.|+ |..||||++...++ +.+.+|.++...+ +|+||+.+++.-..++ ..+||.+|-
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH 291 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH 291 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence 357999999999999997 89999999986544 4567787777654 9999999998765433 568999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc-----CCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHE-----FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-----~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
+.|||+|+|... .++-...++++..+|.||+|||. ...+.|.|||||+.|||+..++.+.|+|+|+|.
T Consensus 292 e~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 292 EHGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred cCCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 999999999764 48889999999999999999994 222479999999999999999999999999997
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC----C-C-chhhhHHHHHHHHHHH
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK----P-S-QKWDIYSYGVILLEMI 630 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~-s-~~~DVwS~Gvvl~ell 630 (714)
...... .++.......+||-.|||||++.... + + ..+||||||.|+||++
T Consensus 365 ~h~~~t------------------------~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEia 420 (513)
T KOG2052|consen 365 RHDSDT------------------------DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIA 420 (513)
T ss_pred EecccC------------------------CcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH
Confidence 554321 11233445678899999999995422 1 2 3599999999999997
Q ss_pred hC----------CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 631 TG----------RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 631 tG----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
-+ +.||++.-..+....+.. ..+ -.+-+.|.++......+.+..+.++|+.||..+|..|-|+-
T Consensus 421 rRc~~ggi~eey~~Pyyd~Vp~DPs~eeMr-kVV-----Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltAL 494 (513)
T KOG2052|consen 421 RRCESGGIVEEYQLPYYDVVPSDPSFEEMR-KVV-----CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTAL 494 (513)
T ss_pred HHhhcCCEehhhcCCcccCCCCCCCHHHHh-cce-----eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHH
Confidence 63 357755444443332211 111 11223455555666677889999999999999999999999
Q ss_pred HHHHHHhhhhcc
Q 005102 701 HISDALDRLIVS 712 (714)
Q Consensus 701 evl~~L~~i~~~ 712 (714)
.+.+.|.++..+
T Consensus 495 riKKtl~~l~~~ 506 (513)
T KOG2052|consen 495 RIKKTLAKLSNS 506 (513)
T ss_pred HHHHHHHHHhcC
Confidence 999999988754
No 220
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.9e-36 Score=310.41 Aligned_cols=246 Identities=24% Similarity=0.310 Sum_probs=192.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ 94 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence 36999999999999875 58899999987765555567889999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... ..+++.++..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~----- 160 (267)
T cd06645 95 DIYHVT------GPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI----- 160 (267)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-----
Confidence 998754 458899999999999999999999 899999999999999999999999999986542110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......|+..|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 161 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~ 217 (267)
T cd06645 161 -----------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA 217 (267)
T ss_pred -----------------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh
Confidence 0112234678899999974 45688999999999999999999999853321110
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+......... .+...... .....+.+++.+||..+|++|||++++++
T Consensus 218 -----~~~~~~~~~~-----~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 218 -----LFLMTKSNFQ-----PPKLKDKM---KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -----HHhhhccCCC-----CCcccccC---CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000111100 01111000 11235779999999999999999999875
No 221
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2e-36 Score=309.47 Aligned_cols=245 Identities=22% Similarity=0.336 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||++... +++.+|+|.++.. .....+.+.+|+.++++++|+||+++++++...+..++||||+++|+|
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 85 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDL 85 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcH
Confidence 47999999999999975 5889999998653 233456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++....+ ..+++..++.++.|++.||.|||+ ++|+|+||||+||++++++.++++|||.++......
T Consensus 86 ~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---- 154 (255)
T cd08219 86 MQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---- 154 (255)
T ss_pred HHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc----
Confidence 998865432 357899999999999999999999 899999999999999999999999999987543211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||... +.
T Consensus 155 ------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~ 205 (255)
T cd08219 155 ------------------------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SW 205 (255)
T ss_pred ------------------------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CH
Confidence 0111234577899999999888999999999999999999999999432 11
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
............ .+ ... .....+.+++.+||+.||++|||+.+++.+
T Consensus 206 ~~~~~~~~~~~~------~~-~~~-----~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 206 KNLILKVCQGSY------KP-LPS-----HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHhcCCC------CC-CCc-----ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111111111111 01 111 122357899999999999999999999865
No 222
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-36 Score=322.25 Aligned_cols=202 Identities=23% Similarity=0.262 Sum_probs=163.5
Q ss_pred cccccc--CceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKS--GIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+||+| +|++||++..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 379999 68899999874 58999999997642 23345677899999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++..... ..+++..+++++.|++.||+|||+ .+|+||||||+|||++.++.++++||+.+........
T Consensus 84 ~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 84 GSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999865422 348999999999999999999999 8999999999999999999999999987653321110
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
... ..........++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 157 RLR---------------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccc---------------------ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 000 00001112235677999999976 4589999999999999999999999954
No 223
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-36 Score=325.34 Aligned_cols=186 Identities=23% Similarity=0.308 Sum_probs=158.5
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|+||.||+|+... ++.||+|..... ....|+.++++++||||+++++++...+..++||||+. ++|
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 143 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDL 143 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcH
Confidence 3579999999999999864 678999975442 23569999999999999999999999999999999994 689
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+++|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 144 ~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 210 (357)
T PHA03209 144 YTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----- 210 (357)
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccC-----
Confidence 98886543 458999999999999999999999 89999999999999999999999999998743211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
.......||..|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 211 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 211 ------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred ------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 01122347889999999999999999999999999999999766653
No 224
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.5e-37 Score=327.51 Aligned_cols=235 Identities=22% Similarity=0.237 Sum_probs=181.9
Q ss_pred ccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhcc---CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI---RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
||+|+||+||+|+.. +++.||||++.+.. ......+..|..++.+. +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999976 48999999986532 12233456677777665 699999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 81 g~L~~~l~~~------~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~- 150 (330)
T cd05586 81 GELFWHLQKE------GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN- 150 (330)
T ss_pred ChHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-
Confidence 9999988754 458899999999999999999999 899999999999999999999999999987432110
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......||..|+|||++.+. .++.++|||||||++|||+||+.||....
T Consensus 151 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~-- 201 (330)
T cd05586 151 ---------------------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED-- 201 (330)
T ss_pred ---------------------------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC--
Confidence 111234578899999998764 47999999999999999999999994321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
..+........... +... .....+.+++.+||+.||++||++
T Consensus 202 ---~~~~~~~i~~~~~~--------~~~~----~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 202 ---TQQMYRNIAFGKVR--------FPKN----VLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred ---HHHHHHHHHcCCCC--------CCCc----cCCHHHHHHHHHHcCCCHHHCCCC
Confidence 11222221111111 1110 012356789999999999999954
No 225
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.3e-36 Score=308.18 Aligned_cols=251 Identities=27% Similarity=0.404 Sum_probs=195.5
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCc------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
...||+|+||+||+|...+++.+|+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV 84 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence 357999999999999988899999998875321 12356889999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++++|.+++... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++.....
T Consensus 85 ~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 85 PGGSISSILNRF------GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 999999999754 357899999999999999999999 89999999999999999999999999998865321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
..... .........|+..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~----------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 213 (265)
T cd06631 156 GLHGT----------------------HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR 213 (265)
T ss_pred ccccc----------------------ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh
Confidence 11000 00011223468889999999988899999999999999999999999953211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .... ....... ..+..... ....+.+++.+||+.+|++|||+.++++
T Consensus 214 ~----~~~~-~~~~~~~-----~~~~~~~~-----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 214 L----AAMF-YIGAHRG-----LMPRLPDS-----FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred H----HHHH-HhhhccC-----CCCCCCCC-----CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 1111 1111100 01111111 2235789999999999999999999874
No 226
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.7e-36 Score=311.07 Aligned_cols=252 Identities=27% Similarity=0.395 Sum_probs=197.8
Q ss_pred ccccccCceEEEEEEECC-C----cEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-G----HTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.+++ | ..||+|.+..... .....+.+|+.++++++||||+++++++.. ...++||||++
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 91 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMP 91 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCC
Confidence 579999999999998753 3 2689998876543 334678999999999999999999999987 78899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 92 LGCLLDYVRNHK-----DNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 999999997653 348999999999999999999999 899999999999999999999999999998654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. .......++..|+|||.+....++.++||||||+++||+++ |+.||....
T Consensus 164 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~- 216 (279)
T cd05057 164 KE--------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP- 216 (279)
T ss_pred cc--------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-
Confidence 10 00111122456999999988889999999999999999999 999984321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
..++.+... ..... -.+ .. ....+.+++.+||..||.+|||+.++++.|+++...
T Consensus 217 ----~~~~~~~~~-~~~~~---~~~---~~-----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 217 ----AVEIPDLLE-KGERL---PQP---PI-----CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ----HHHHHHHHh-CCCCC---CCC---CC-----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 112222111 11110 001 01 123578999999999999999999999999987653
No 227
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-36 Score=328.90 Aligned_cols=254 Identities=20% Similarity=0.255 Sum_probs=189.9
Q ss_pred ccccccCceEEEEEEECC---CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED---GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|+||.||++...+ +..||+|.+... +.+.+|++++++++||||+++++++...+..++||||+. ++
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 171 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CD 171 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CC
Confidence 479999999999998643 578999988653 235689999999999999999999999999999999995 68
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-- 240 (392)
T PHA03207 172 LFTYVDRS------GPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-- 240 (392)
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcccc--
Confidence 99888433 468999999999999999999999 8999999999999999999999999999975432110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc--
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE-- 643 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~-- 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 241 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~ 296 (392)
T PHA03207 241 ------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS 296 (392)
T ss_pred ------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH
Confidence 111223457899999999999999999999999999999999999995432211
Q ss_pred chhHHHHHHHHhhcC-Cccc-----------ccCCCCCCCCCc------HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKK-PLAD-----------VLDPYLAPDADK------EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~-~~~~-----------~~d~~~~~~~~~------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+..... ...... .+.. .......+.... ......+.+++.+||..||++|||+.|++.
T Consensus 297 ~~l~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 297 SQLRSIIR-CMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred HHHHHHHH-HhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111111 110000 0000 000000000000 011235778999999999999999999875
No 228
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.4e-36 Score=326.30 Aligned_cols=255 Identities=20% Similarity=0.289 Sum_probs=188.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++||||+++++++... ...++|||
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME 102 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhh
Confidence 47999999999999875 4889999999754 233346788999999999999999999988643 24689999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++ ++.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 103 ~~~~-~l~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 103 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred hhcc-cHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 9965 7777664 237889999999999999999999 899999999999999999999999999997542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 171 ~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 171 TS-----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred Cc-----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11 0112234688899999999989999999999999999999999999432
Q ss_pred CCCcchhHHH------------------HHHHHhhcCCcccccCCCC------CCCC-CcHHHHHHHHHHHhHccCCCCC
Q 005102 640 GSSEMDLVNW------------------MQLCIEEKKPLADVLDPYL------APDA-DKEEEIIAVLKIAMACVHSSPE 694 (714)
Q Consensus 640 ~~~~~~l~~~------------------~~~~~~~~~~~~~~~d~~~------~~~~-~~~~~~~~l~~li~~Cl~~dP~ 694 (714)
...+ ..... +...............+.. .... ........+.+++.+||+.||+
T Consensus 222 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~ 300 (355)
T cd07874 222 DYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300 (355)
T ss_pred CHHH-HHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCch
Confidence 2110 00000 0001111000000000000 0000 0011234678999999999999
Q ss_pred CCCCHHHHHHH
Q 005102 695 KRPTMRHISDA 705 (714)
Q Consensus 695 ~RPt~~evl~~ 705 (714)
+|||+.|+++.
T Consensus 301 ~Rps~~ell~h 311 (355)
T cd07874 301 KRISVDEALQH 311 (355)
T ss_pred hcCCHHHHhcC
Confidence 99999999873
No 229
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=335.12 Aligned_cols=258 Identities=24% Similarity=0.364 Sum_probs=208.8
Q ss_pred HHHHhccccccccCceEEEEEEE-CCC----cEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCcee
Q 005102 402 ELLKASAFVLGKSGIGIVYKVVL-EDG----HTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKL 475 (714)
Q Consensus 402 ~l~~~~~~~lG~G~~g~Vy~~~~-~~g----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 475 (714)
|.+....++||+|.||+||||.+ +.| -+||+|++... ..+..+++..|+-+|.+++|||+++++|+|.... ..
T Consensus 695 Etelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 695 ETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 33334457899999999999986 333 57899998764 4445678999999999999999999999998765 88
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
||++||+.|+|.++++.++ ..+..+..+.|..|||+||.|||+ +++|||||.++|||+.+-..+||.|||+|
T Consensus 774 lvtq~mP~G~LlDyvr~hr-----~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-----DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchh
Confidence 9999999999999999876 457788999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~ 634 (714)
+.+..++........++ .+-|||-|.+....|+.++|||||||++||++| |..
T Consensus 846 ~ll~~d~~ey~~~~gK~--------------------------pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~ 899 (1177)
T KOG1025|consen 846 KLLAPDEKEYSAPGGKV--------------------------PIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAK 899 (1177)
T ss_pred hccCccccccccccccc--------------------------CcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCC
Confidence 99877665544443333 234999999999999999999999999999999 999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
|+......+ + ...++.+..+ -.| +-+...++.++.+||..|++.||+++++...+.++.+
T Consensus 900 Py~gi~~~e--I----~dlle~geRL---sqP--------piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 900 PYDGIPAEE--I----PDLLEKGERL---SQP--------PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred ccCCCCHHH--h----hHHHhccccC---CCC--------CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 995443222 2 2222222211 111 2244578999999999999999999999999887654
No 230
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.4e-36 Score=314.47 Aligned_cols=252 Identities=25% Similarity=0.427 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCc----EEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGH----TLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.+. +|. .||+|.+..... .....+.+|+.++++++||||+++++++... ..++++||++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~ 91 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMP 91 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcC
Confidence 47999999999999864 343 578898876433 2234788999999999999999999998754 5679999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 92 HGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred CCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccCcc
Confidence 999999987653 358899999999999999999999 899999999999999999999999999998653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. .......++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 164 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~- 216 (303)
T cd05110 164 KE--------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP- 216 (303)
T ss_pred cc--------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 00 01111233567999999998899999999999999999998 889984321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
......++ ....... .+ . .....+.+++.+||..+|++||+++++++.|+++...
T Consensus 217 -~~~~~~~~----~~~~~~~---~~---~-----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 217 -TREIPDLL----EKGERLP---QP---P-----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -HHHHHHHH----HCCCCCC---CC---C-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11222222 1111110 00 1 1123678999999999999999999999999987643
No 231
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.8e-36 Score=326.46 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=188.6
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+++.+. ++.||+|++... .....+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g 127 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 127 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 3579999999999999864 789999998652 222335678999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 128 g~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~- 196 (371)
T cd05622 128 GDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG- 196 (371)
T ss_pred CcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC-
Confidence 9999998643 37888899999999999999999 999999999999999999999999999987643211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC----CCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK----PSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 197 --------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 250 (371)
T cd05622 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (371)
T ss_pred --------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC
Confidence 01122345799999999986543 789999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISDA 705 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 705 (714)
. .............. ... ... ......+.+++..|+..++.+ ||+++|+++.
T Consensus 251 ~-----~~~~~~~i~~~~~~-~~~-----~~~---~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 251 S-----LVGTYSKIMNHKNS-LTF-----PDD---NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred C-----HHHHHHHHHcCCCc-ccC-----CCc---CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 1 12222222221111 000 000 112235778999999844433 6788888763
No 232
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-36 Score=316.38 Aligned_cols=244 Identities=22% Similarity=0.338 Sum_probs=194.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||++... ++..||||++........+.+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 36999999999999875 58899999987765555677999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.. ..+++.++..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++.......
T Consensus 108 ~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 108 DIVTH-------TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred HHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 98853 347899999999999999999999 899999999999999999999999999987543211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... .
T Consensus 173 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~--- 224 (292)
T cd06658 173 -----------------------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--L--- 224 (292)
T ss_pred -----------------------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H---
Confidence 011123457889999999888899999999999999999999999953211 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..+..... ...+..... ......+.+++.+||..||++|||++|+++.
T Consensus 225 ~~~~~~~~-------~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 225 QAMRRIRD-------NLPPRVKDS---HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHh-------cCCCccccc---cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11111111 111111111 0122357789999999999999999999863
No 233
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.9e-36 Score=314.21 Aligned_cols=244 Identities=21% Similarity=0.340 Sum_probs=194.1
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|+||.||++... ++..||+|.+........+.|.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 12 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (280)
T cd06611 12 ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDS 91 (280)
T ss_pred HhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHH
Confidence 6999999999999975 589999999987666666789999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+.+++.|++.||.|||+ .+|+|+||||+||+++.++.++|+|||++.......
T Consensus 92 ~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------ 157 (280)
T cd06611 92 IMLELE-----RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL------ 157 (280)
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc------
Confidence 987543 358999999999999999999999 899999999999999999999999999886543210
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.......++..|+|||.+. ...++.++||||||+++|||++|+.||....
T Consensus 158 ----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~--- 212 (280)
T cd06611 158 ----------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN--- 212 (280)
T ss_pred ----------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC---
Confidence 0111234577899999974 3457889999999999999999999994321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ +.... .......+.+++.+||+.+|++||+++++++
T Consensus 213 --~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 213 --PMRVLLKILKSEP-------PTLDQ---PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred --HHHHHHHHhcCCC-------CCcCC---cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1111111111111 11100 0112235789999999999999999999875
No 234
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.2e-35 Score=304.71 Aligned_cols=247 Identities=25% Similarity=0.360 Sum_probs=196.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++...+..+++|||+++++|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~ 88 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQ 88 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 47999999999999975 47889999998765556678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++.++..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++.......
T Consensus 89 ~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----- 155 (262)
T cd06613 89 DIYQVTR-----GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI----- 155 (262)
T ss_pred HHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhh-----
Confidence 9987642 358899999999999999999999 899999999999999999999999999987653211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC---CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV---KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+. .++.++||||||+++|||+||+.||........
T Consensus 156 -----------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~ 212 (262)
T cd06613 156 -----------------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA 212 (262)
T ss_pred -----------------------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011123457789999999776 789999999999999999999999954321111
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
........ ...+... ........+.+++.+||..+|.+|||+.+|+.
T Consensus 213 -----~~~~~~~~-----~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 213 -----LFLISKSN-----FPPPKLK---DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -----HHHHHhcc-----CCCcccc---chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 10111110 0001111 11223456889999999999999999999874
No 235
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.4e-36 Score=311.51 Aligned_cols=260 Identities=21% Similarity=0.287 Sum_probs=189.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||++ ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MD 84 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CC
Confidence 46999999999999975 58999999987542 2234678899999999999999999999999999999999997 68
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++...... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 85 l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (285)
T cd07861 85 LKKYLDSLPKG---QYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--- 155 (285)
T ss_pred HHHHHhcCCCC---CcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---
Confidence 98888654321 458999999999999999999999 899999999999999999999999999987542110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......+++.|+|||.+.+. .++.++|||||||++|||+||+.||...... .
T Consensus 156 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~ 209 (285)
T cd07861 156 -------------------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-D 209 (285)
T ss_pred -------------------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-H
Confidence 011122346789999988654 4789999999999999999999999432111 1
Q ss_pred hhHHHHHHHH-------hhcCC---cccccCCCCCCCC--CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCI-------EEKKP---LADVLDPYLAPDA--DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~-------~~~~~---~~~~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.......... ..... .....+....... .......++.+++.+||+.||++|||+.+|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 210 QLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 1111100000 00000 0000000000000 00012235779999999999999999999874
No 236
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.9e-36 Score=311.76 Aligned_cols=248 Identities=24% Similarity=0.363 Sum_probs=196.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||+||++... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL 90 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence 37999999999999975 48899999886543 33356789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.+++.||.|||+. .+++||||||+||++++++.++|+|||++......
T Consensus 91 ~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~----- 157 (284)
T cd06620 91 DRIYKKG------GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS----- 157 (284)
T ss_pred HHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-----
Confidence 9988754 3588999999999999999999962 47999999999999999999999999988643211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc---
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE--- 643 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~--- 643 (714)
......|+..|+|||++.+..++.++|||||||++|||+||+.||......+
T Consensus 158 -------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~ 212 (284)
T cd06620 158 -------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ 212 (284)
T ss_pred -------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh
Confidence 0112346788999999988889999999999999999999999995432211
Q ss_pred ---chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 644 ---MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 644 ---~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..+.+++........ +.+. .......+.+++.+||+.||++|||+.|+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 213 DDPMGILDLLQQIVQEPP-------PRLP----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred hhhhHHHHHHHHHhhccC-------CCCC----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 112222222222111 1111 11123468899999999999999999999975
No 237
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.8e-36 Score=317.04 Aligned_cols=242 Identities=21% Similarity=0.337 Sum_probs=193.8
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 107 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTD 107 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHH
Confidence 6999999999999875 589999999876555555778999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.. ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 108 ~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~------ 171 (297)
T cd06659 108 IVSQ-------TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------ 171 (297)
T ss_pred HHhh-------cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc------
Confidence 8753 347899999999999999999999 899999999999999999999999999987543211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVN 648 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~ 648 (714)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||..... . .
T Consensus 172 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~---~ 224 (297)
T cd06659 172 ----------------------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--V---Q 224 (297)
T ss_pred ----------------------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H---H
Confidence 011223467889999999988899999999999999999999999953221 1 1
Q ss_pred HHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 649 WMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 649 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+........ +..... ......+.+++.+||+.+|++||+++++++
T Consensus 225 ~~~~~~~~~~-------~~~~~~---~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 225 AMKRLRDSPP-------PKLKNA---HKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHHHhccCC-------CCcccc---CCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 1111111110 000000 011235788999999999999999999987
No 238
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-37 Score=317.29 Aligned_cols=246 Identities=24% Similarity=0.371 Sum_probs=195.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCC--CCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGE--GGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+||.++||++...+.+.+|+|++.. .+.+....|.+|+..|.+++ |.+||++++|-..++..||||||= ..|
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~D 445 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DID 445 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-ccc
Confidence 37999999999999998889999998764 35566778999999999995 999999999999999999999986 459
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|..+|...... ...| .++.|..|++.|+.++|. .||||.||||+|+|+- .|.+||+|||+|..+..+.
T Consensus 446 L~kiL~k~~~~----~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT--- 513 (677)
T KOG0596|consen 446 LNKILKKKKSI----DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT--- 513 (677)
T ss_pred HHHHHHhccCC----CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhcccCccc---
Confidence 99999877532 2334 788899999999999999 9999999999999985 5689999999998765332
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-----------CCCchhhhHHHHHHHHHHHhCCC
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-----------KPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
+.......+||+.||+||.+... +++.++||||+|||||+|+.|++
T Consensus 514 -----------------------TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgkt 570 (677)
T KOG0596|consen 514 -----------------------TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKT 570 (677)
T ss_pred -----------------------cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCC
Confidence 13344567899999999998532 25789999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
||.+ +...+. .+..+.||.-...+.......++.++|+.||.+||.+|||+.++++
T Consensus 571 Pf~~-------~~n~~a-------Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 571 PFGQ-------IINQIA-------KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred chHH-------HHHHHH-------HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 9932 221111 1344445533222222222234889999999999999999999875
No 239
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.5e-36 Score=324.27 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=187.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++||||+++++++... ...|+|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e 109 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEe
Confidence 47999999999999975 4889999999754 233346788999999999999999999987643 34699999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++ +|.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 110 ~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 110 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred CCCC-CHHHHHH--------hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 9965 7777774 237889999999999999999999 899999999999999999999999999997543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 178 ~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 178 TS-----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CC-----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 11 0112234688899999999999999999999999999999999999432
Q ss_pred CCCcchhHHHHH------------------HHHhhcCCccc-----ccCCCCCC-CC-CcHHHHHHHHHHHhHccCCCCC
Q 005102 640 GSSEMDLVNWMQ------------------LCIEEKKPLAD-----VLDPYLAP-DA-DKEEEIIAVLKIAMACVHSSPE 694 (714)
Q Consensus 640 ~~~~~~l~~~~~------------------~~~~~~~~~~~-----~~d~~~~~-~~-~~~~~~~~l~~li~~Cl~~dP~ 694 (714)
... ..+...+. ........... .......+ .. ........+.+++.+|++.||+
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~ 307 (364)
T cd07875 229 DHI-DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307 (364)
T ss_pred CHH-HHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcc
Confidence 211 00100000 00000000000 00000000 00 0001224678999999999999
Q ss_pred CCCCHHHHHH
Q 005102 695 KRPTMRHISD 704 (714)
Q Consensus 695 ~RPt~~evl~ 704 (714)
+|||+.|+++
T Consensus 308 ~R~t~~e~L~ 317 (364)
T cd07875 308 KRISVDEALQ 317 (364)
T ss_pred cCCCHHHHhc
Confidence 9999999976
No 240
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.3e-36 Score=312.16 Aligned_cols=257 Identities=23% Similarity=0.286 Sum_probs=186.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhcc---CCCCccceEEEEEeC-----CceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKI---RHSNIVTLRAYYWSV-----DEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~-----~~~~lV 477 (714)
+.||+|+||+||+|+.. +++.||+|.++.... .....+.+|+++++++ +||||+++++++... ...++|
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv 85 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV 85 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence 46999999999999976 589999999875421 2224566788877766 699999999998642 347899
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||++ ++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 86 ~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 86 FEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred Ecccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 99997 489988875432 348999999999999999999999 8999999999999999999999999999876
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
..... ......||..|+|||++.+..++.++|||||||++|||++|++||.
T Consensus 158 ~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 158 YSCQM-----------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred ccCcc-----------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 53210 1112345788999999998899999999999999999999999984
Q ss_pred cCCCCcchhHHHHHHHHhhc--CCcc-------cccCCCCCCCC--CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEEK--KPLA-------DVLDPYLAPDA--DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~--~~~~-------~~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..... ..+..... ..... .... ....+...... ........+.+++.+||+.||++|||+.|++.
T Consensus 209 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 209 GNSEA-DQLGKIFD-LIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCCHH-HHHHHHHH-HhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 32211 11111111 10000 0000 00000000000 00112345789999999999999999999874
No 241
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.2e-36 Score=310.40 Aligned_cols=241 Identities=23% Similarity=0.371 Sum_probs=193.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence 36999999999999875 47899999987543 33446789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.. ..+++..+..++.|++.|+.|||+ ++++|+||+|+||++++++.+||+|||+++......
T Consensus 90 ~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06642 90 LDLLKP-------GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred HHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc----
Confidence 998853 347899999999999999999999 899999999999999999999999999987543210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......++..|+|||++.+..++.++|||||||++|||+||+.|+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---- 207 (277)
T cd06642 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM---- 207 (277)
T ss_pred ------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh----
Confidence 0111234577899999999888999999999999999999999998432111
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..... .... ..+.... .....+.+++.+||+.+|++|||+.++++
T Consensus 208 -~~~~~-~~~~------~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 208 -RVLFL-IPKN------SPPTLEG-----QYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -hHHhh-hhcC------CCCCCCc-----ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11111 1111 1111111 12346889999999999999999999987
No 242
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.3e-36 Score=333.89 Aligned_cols=253 Identities=17% Similarity=0.232 Sum_probs=182.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCC------CCccceEEEEEeC-CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH------SNIVTLRAYYWSV-DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~~~~~~~-~~~~lV~e~ 480 (714)
+.||+|+||+||+|++. +++.||||+++.... ....+..|++++++++| .+++++++++... ++.++|||+
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~ 213 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK 213 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEec
Confidence 47999999999999975 478999999975322 22456677777777754 4588899988764 468899998
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---------------
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM--------------- 545 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--------------- 545 (714)
+ +++|.+++... ..+++..+..|+.||+.||+|||+. .+||||||||+|||++.++
T Consensus 214 ~-g~~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 214 Y-GPCLLDWIMKH------GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred c-CCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 8 77899988754 4589999999999999999999971 3999999999999998765
Q ss_pred -CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHH
Q 005102 546 -EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGV 624 (714)
Q Consensus 546 -~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gv 624 (714)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||
T Consensus 285 ~~vkl~DfG~~~~~~-------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv 333 (467)
T PTZ00284 285 CRVRICDLGGCCDER-------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333 (467)
T ss_pred ceEEECCCCccccCc-------------------------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHH
Confidence 49999999875321 1122345789999999999999999999999999
Q ss_pred HHHHHHhCCCccccCCCCcchhHHHHHHHHhh-------cC---Cccccc------CCCCCCC----------CCcHHHH
Q 005102 625 ILLEMITGRTAVVQVGSSEMDLVNWMQLCIEE-------KK---PLADVL------DPYLAPD----------ADKEEEI 678 (714)
Q Consensus 625 vl~elltG~~p~~~~~~~~~~l~~~~~~~~~~-------~~---~~~~~~------d~~~~~~----------~~~~~~~ 678 (714)
++|||++|+.||.... ..+....+...... .. ...+++ .+...+. .......
T Consensus 334 il~elltG~~pf~~~~--~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (467)
T PTZ00284 334 IIYELYTGKLLYDTHD--NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRD 411 (467)
T ss_pred HHHHHHhCCCCCCCCC--hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhch
Confidence 9999999999995322 11211111111000 00 000000 0000000 0000112
Q ss_pred HHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 679 IAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 679 ~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+.+|+.+||+.||++|||++|+++
T Consensus 412 ~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 412 DLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 35789999999999999999999986
No 243
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=318.10 Aligned_cols=243 Identities=23% Similarity=0.295 Sum_probs=199.6
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
..||+|.||.||+++.+. |+.+|+|.+.+... .....+.+|+++|+++. |||||.+++.|++....++|||++.+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~G 120 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEG 120 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCC
Confidence 479999999999999876 99999999987533 23468999999999998 99999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC----CCeEEcccchhhhhh
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN----MEPHVSDFGLARLAN 559 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~~~ 559 (714)
|.|.+.+... . +++..+..++.|++.|++|||+ .+|+||||||+|+|+... +.+|++|||+|+...
T Consensus 121 GeLfd~i~~~------~-~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 121 GELFDRIVKK------H-YSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred chHHHHHHHc------c-CCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999998654 2 8899999999999999999999 899999999999999643 579999999998765
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||++|+|||++....|+..+||||+||++|.|++|..||...
T Consensus 191 ~~-----------------------------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 191 PG-----------------------------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred CC-----------------------------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 31 1234567899999999999999999999999999999999999999543
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...... ........ ++-++.. ......+.+++..|+..||.+|+|+.++++
T Consensus 242 ~~~~~~-----~~i~~~~~---~f~~~~w------~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 242 TEFEIF-----LAILRGDF---DFTSEPW------DDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ChhHHH-----HHHHcCCC---CCCCCCc------cccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 322211 11222211 1112211 223446789999999999999999999987
No 244
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.3e-36 Score=315.82 Aligned_cols=257 Identities=22% Similarity=0.297 Sum_probs=190.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||+|+||.||+|+.+ +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||++ ++|
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l 90 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 90 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCH
Confidence 46999999999999875 48899999987543 2233567889999999999999999999999999999999997 599
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 91 ~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---- 158 (301)
T cd07873 91 KQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---- 158 (301)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC----
Confidence 99887543 357899999999999999999999 899999999999999999999999999987542111
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......+++.|+|||.+.+. .++.++|||||||++|||+||+.||..... .+
T Consensus 159 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~--~~ 212 (301)
T cd07873 159 ------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV--EE 212 (301)
T ss_pred ------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH--HH
Confidence 011122347789999998654 478899999999999999999999953321 11
Q ss_pred hHHHHHHHHhhcC--Cccccc---------CCCCCCCC---CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK--PLADVL---------DPYLAPDA---DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~--~~~~~~---------d~~~~~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ ....+. .+...... ........+.+++.+|++.||.+|||++|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 213 QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111111111000 000000 00000000 00011235779999999999999999999986
No 245
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.6e-36 Score=318.81 Aligned_cols=249 Identities=22% Similarity=0.288 Sum_probs=187.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+++.. +++.||+|++.+. .....+.+.+|+.++..++|+||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 86 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGG 86 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCC
Confidence 47999999999999976 4899999998752 2223456889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (331)
T cd05597 87 DLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG-- 156 (331)
T ss_pred cHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC--
Confidence 9999997532 358899999999999999999999 899999999999999999999999999986543211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 157 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 157 -------------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred -------------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 001112347889999999863 45788999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCC--CCCCCHHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP--EKRPTMRHISDA 705 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP--~~RPt~~evl~~ 705 (714)
...+............ . +.+. .. .....+.+++.+|+..++ ..||+++++++.
T Consensus 212 -----~~~~~~~~i~~~~~~~-~-~~~~-~~-----~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 212 -----SLVETYGKIMNHKEHF-Q-FPPD-VT-----DVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -----CHHHHHHHHHcCCCcc-c-CCCc-cC-----CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1222222222111100 0 0010 00 122356778888775433 347888888753
No 246
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.5e-36 Score=304.64 Aligned_cols=242 Identities=28% Similarity=0.461 Sum_probs=191.4
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++||||+++++++.. +..++||||+++++|.
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 86 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLV 86 (254)
T ss_pred eeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCCCCHH
Confidence 35799999999999986 57889999987543 23678999999999999999999999865 4579999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++..... ..+++..+.+++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 87 NFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred HHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 99976532 358899999999999999999999 899999999999999999999999999987432110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
.....+..|+|||.+.+..++.++|||||||++|||++ |+.||.... .
T Consensus 155 --------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~ 203 (254)
T cd05083 155 --------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----L 203 (254)
T ss_pred --------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----H
Confidence 01112356999999988899999999999999999998 999984322 1
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.+.... ....... ++ .. .....+.+++.+||+.+|++||+++++++.|++
T Consensus 204 ~~~~~~-~~~~~~~----~~--~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 204 KEVKEC-VEKGYRM----EP--PE-----GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHH-HhCCCCC----CC--CC-----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 122211 1111110 00 11 123467899999999999999999999998864
No 247
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-35 Score=305.32 Aligned_cols=248 Identities=23% Similarity=0.370 Sum_probs=193.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch---------hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ---------RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 478 (714)
..||+|+||.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFL 85 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEE
Confidence 47999999999999875 4889999988654221 1256889999999999999999999999999999999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.++..
T Consensus 86 e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 86 EYVPGGSVAALLNNY------GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EecCCCCHHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999754 458889999999999999999999 89999999999999999999999999999865
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
......... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~~~~----------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 157 EANSLSTKT----------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred ccccccCCc----------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 421100000 0011123467789999999988899999999999999999999999953
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... . .-+..... ...+..... ....+.+++.+||+.||.+||++.|+++
T Consensus 215 ~~~----~-~~~~~~~~-------~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 215 CTQ----L-QAIFKIGE-------NASPEIPSN-----ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ccH----H-HHHHHHhc-------cCCCcCCcc-----cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 211 1 11111001 111111111 2236789999999999999999999875
No 248
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.3e-35 Score=306.61 Aligned_cols=255 Identities=26% Similarity=0.405 Sum_probs=193.6
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeE
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLL 476 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~l 476 (714)
+.||+|+||.||+|.+. +++.||||++... .....+++.+|++++++++||||+++++++...+ ..++
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMV 84 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEE
Confidence 47999999999999864 3689999998764 2334567899999999999999999999886532 2378
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
++||+++|+|.+++...........+++..+++++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 85 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 85 ILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcccccc
Confidence 99999999999887543211111357899999999999999999999 899999999999999999999999999988
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p 635 (714)
....... ........++..|++||.+....++.++||||||+++|||++ |+.|
T Consensus 162 ~~~~~~~--------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p 215 (273)
T cd05074 162 KIYSGDY--------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP 215 (273)
T ss_pred cccCCcc--------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCC
Confidence 5432110 000111223456999999988889999999999999999999 8888
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
|... ...++..+.. ..... .... .....+.+++.+||+.+|++|||+.++++.|+++
T Consensus 216 ~~~~--~~~~~~~~~~----~~~~~------~~~~-----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 216 YAGV--ENSEIYNYLI----KGNRL------KQPP-----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCC--CHHHHHHHHH----cCCcC------CCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 8422 1122222111 11110 0001 1223688999999999999999999999999986
No 249
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.2e-36 Score=308.58 Aligned_cols=248 Identities=27% Similarity=0.407 Sum_probs=194.6
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHH--HHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFK--EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||+||++.... ++.||+|++......... ...+|+.++++++||||+++++++......++||||+++++
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~ 84 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGS 84 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEB
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccc
Confidence 479999999999999875 668999999887544322 34569999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.|+++||+|||+ .+|+|+||||+||++++++.++|+|||.+......
T Consensus 85 L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---- 151 (260)
T PF00069_consen 85 LQDYLQKN------KPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN---- 151 (260)
T ss_dssp HHHHHHHH------SSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTST----
T ss_pred cccccccc------cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc----
Confidence 99999732 458999999999999999999999 89999999999999999999999999998753110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........++..|+|||.+. +..++.++||||+|+++|+|++|+.||... ...
T Consensus 152 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~--~~~ 205 (260)
T PF00069_consen 152 ------------------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES--NSD 205 (260)
T ss_dssp ------------------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS--SHH
T ss_pred ------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc--cch
Confidence 11222344678899999998 788999999999999999999999999543 111
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+............. .. .... .......+.+++.+||+.||++|||+.++++
T Consensus 206 ~~~~~~~~~~~~~~--~~---~~~~----~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 206 DQLEIIEKILKRPL--PS---SSQQ----SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHHTHH--HH---HTTS----HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhhhhhhhcccccc--cc---cccc----cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11122211111100 00 0000 0001247889999999999999999999875
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.5e-35 Score=303.06 Aligned_cols=245 Identities=20% Similarity=0.306 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
++||+|+||.||.++.. +++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||+++|+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGT 85 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCc
Confidence 47999999999999864 4889999998654 33445678999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++.......
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-- 156 (256)
T cd08221 86 LYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-- 156 (256)
T ss_pred HHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--
Confidence 9999976532 458899999999999999999999 8999999999999999999999999999875532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......++..|+|||.+.+..++.++||||||+++|||++|+.||... .
T Consensus 157 --------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~ 205 (256)
T cd08221 157 --------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-----N 205 (256)
T ss_pred --------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-----C
Confidence 112234678899999998888999999999999999999999998432 1
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..+.......... . +.. ......+.+++.+||..+|++||+++++++.
T Consensus 206 ~~~~~~~~~~~~~--~----~~~------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 206 PLNLVVKIVQGNY--T----PVV------SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHHcCCC--C----CCc------cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 1222222222111 1 100 1123368899999999999999999999875
No 251
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.5e-36 Score=308.26 Aligned_cols=242 Identities=21% Similarity=0.367 Sum_probs=194.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||.|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++......++|+||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC 86 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence 36999999999999976 48899999987643 33446788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... .+++..+..++.|++.||.|||+ .+++||||+|+||++++++.++|+|||+++......
T Consensus 87 ~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---- 152 (274)
T cd06609 87 LDLLKPG-------KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---- 152 (274)
T ss_pred HHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc----
Confidence 9998643 48899999999999999999999 899999999999999999999999999987654211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......++..|+|||++.+..++.++||||||+++|||+||+.||.....
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~----- 203 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP----- 203 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----
Confidence 111223457789999999988899999999999999999999999943321
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
........... .+..... .....+.+++.+||..+|++|||++++++
T Consensus 204 ~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 204 MRVLFLIPKNN-------PPSLEGN----KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHhhhcC-------CCCCccc----ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11111111111 1111111 02235789999999999999999999975
No 252
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.2e-35 Score=307.41 Aligned_cols=253 Identities=22% Similarity=0.325 Sum_probs=195.1
Q ss_pred cccccCceEEEEEEECC------CcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 410 VLGKSGIGIVYKVVLED------GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.||+|+||.||+|+.+. .+.||+|.+...... ..+.+.+|++++++++|+||+++++++...+..++||||++
T Consensus 12 ~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (275)
T cd05046 12 TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTD 91 (275)
T ss_pred eecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecC
Confidence 69999999999999642 467999988765443 45679999999999999999999999998889999999999
Q ss_pred CCCHhhhhhCCCCCC---CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 483 NGSLATALHGKPGMV---SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
+|+|.+++....... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++++|||+++...
T Consensus 92 ~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~ 168 (275)
T cd05046 92 LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVY 168 (275)
T ss_pred CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccccccccC
Confidence 999999997653211 01258999999999999999999999 899999999999999999999999999986432
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~ 638 (714)
... ........++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 169 ~~~---------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~ 221 (275)
T cd05046 169 NSE---------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG 221 (275)
T ss_pred ccc---------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 110 001111223566999999988889999999999999999999 7888843
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.. ... .+.... ... .. ... .. .....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 222 ~~--~~~---~~~~~~-~~~-~~-~~~---~~-----~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 222 LS--DEE---VLNRLQ-AGK-LE-LPV---PE-----GCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred cc--hHH---HHHHHH-cCC-cC-CCC---CC-----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 21 111 111111 111 00 000 01 122368899999999999999999999998863
No 253
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.7e-35 Score=302.78 Aligned_cols=244 Identities=26% Similarity=0.363 Sum_probs=192.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC-CceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-DEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lV~e~~~~g 484 (714)
+.||+|++|.||++..+ +++.||+|++.... ....+.+.+|++++++++|+|++++++.+... ...++||||++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~ 85 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGG 85 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCC
Confidence 47999999999999975 47899999987542 23445788999999999999999999987644 3578999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++......
T Consensus 86 ~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-- 156 (257)
T cd08223 86 DLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-- 156 (257)
T ss_pred cHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC--
Confidence 99999976432 458999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......+++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 157 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~----- 205 (257)
T cd08223 157 --------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK----- 205 (257)
T ss_pred --------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----
Confidence 0111234577899999999989999999999999999999999998422
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+............. +... ......+.+++.+||+.||++|||+.++++
T Consensus 206 ~~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 206 DMNSLVYRIIEGKL-------PPMP-----KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CHHHHHHHHHhcCC-------CCCc-----cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 12222222222111 1111 112346889999999999999999999875
No 254
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.7e-36 Score=312.67 Aligned_cols=258 Identities=20% Similarity=0.265 Sum_probs=189.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|+||++ ++
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 84 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QD 84 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CC
Confidence 46999999999999986 58999999987532 2223467889999999999999999999999999999999996 58
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++..++.++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 85 l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--- 153 (284)
T cd07839 85 LKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--- 153 (284)
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC---
Confidence 888876543 358999999999999999999999 899999999999999999999999999987543211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+.. ++.++|||||||++|||+||+.|+........
T Consensus 154 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~ 208 (284)
T cd07839 154 -------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 208 (284)
T ss_pred -------------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH
Confidence 0111223567899999987644 69999999999999999999999744322221
Q ss_pred hhHHHHHHHHhhcC-----CcccccCC----CCCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKK-----PLADVLDP----YLAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~-----~~~~~~d~----~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+ ........... ...+..+. ....... ......++.+++.+||+.||++|||++++++
T Consensus 209 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 209 QL-KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HH-HHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 11 11111000000 00000000 0000000 0012346789999999999999999999875
No 255
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.6e-36 Score=341.49 Aligned_cols=248 Identities=20% Similarity=0.328 Sum_probs=188.5
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~ 483 (714)
..||+|+||+||+|.+.. +..||+|.+... .......|..|+.++++++|||||+++++|... +..|+||||+++
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~g 98 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDA 98 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCC
Confidence 479999999999999765 778999988754 233346789999999999999999999988653 468999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCceecCCCCCCeeeCC----------------
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP----KKYVHGDLKPSNILLGH---------------- 543 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~----~~ivHrDlkp~NILl~~---------------- 543 (714)
|+|.++|...... ...+++..++.|+.||+.||+|||+..+ .+||||||||+|||++.
T Consensus 99 GSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 99 GDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 9999998753211 1458999999999999999999998321 35999999999999964
Q ss_pred -CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhH
Q 005102 544 -NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIY 620 (714)
Q Consensus 544 -~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVw 620 (714)
...+||+|||+++..... .......||+.|+|||++.+ ..++.++|||
T Consensus 177 g~~iVKLsDFGlAr~l~~~-----------------------------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVW 227 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIGIE-----------------------------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMW 227 (1021)
T ss_pred CCCceEEccCCcccccccc-----------------------------ccccccCCCccccCHHHHhccCCCCCchhHHH
Confidence 235899999999754321 01123457899999999854 4589999999
Q ss_pred HHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 621 SYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 621 S~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
|||||+|||+||+.||.... ....++.. +.... .+... .....+.+|+..||..+|++||++.
T Consensus 228 SLG~ILYELLTGk~PF~~~~----~~~qli~~-lk~~p--------~lpi~----~~S~eL~dLI~~~L~~dPeeRPSa~ 290 (1021)
T PTZ00266 228 ALGCIIYELCSGKTPFHKAN----NFSQLISE-LKRGP--------DLPIK----GKSKELNILIKNLLNLSAKERPSAL 290 (1021)
T ss_pred HHHHHHHHHHHCCCCCCcCC----cHHHHHHH-HhcCC--------CCCcC----CCCHHHHHHHHHHhcCChhHCcCHH
Confidence 99999999999999994321 11222211 11111 11100 1123688999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
|++.
T Consensus 291 QlL~ 294 (1021)
T PTZ00266 291 QCLG 294 (1021)
T ss_pred HHhc
Confidence 9983
No 256
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-36 Score=325.33 Aligned_cols=221 Identities=22% Similarity=0.308 Sum_probs=170.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++..+ +++.||+|++.... ......+.+|+.++.+++||||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg 86 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGG 86 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCc
Confidence 47999999999999976 48999999997532 233457888999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 87 DMMTLLMKK------DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 999999755 458899999999999999999999 99999999999999999999999999998765322110
Q ss_pred CCccCCC-C-CCC----Cc-hhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 565 PTLQSNR-M-PAE----KP-QERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 565 ~~~~~~~-~-~~~----~~-~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
....... . +.. .. ....................||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 0000000 0 000 00 000000000000111224568999999999999999999999999999999999999994
Q ss_pred c
Q 005102 638 Q 638 (714)
Q Consensus 638 ~ 638 (714)
.
T Consensus 238 ~ 238 (360)
T cd05627 238 S 238 (360)
T ss_pred C
Confidence 3
No 257
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.9e-35 Score=304.80 Aligned_cols=242 Identities=22% Similarity=0.356 Sum_probs=194.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSA 89 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcH
Confidence 36999999999999975 48899999987543 34456789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ++++.++..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++.......
T Consensus 90 ~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06640 90 LDLLRAG-------PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred HHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc----
Confidence 9998642 47889999999999999999999 899999999999999999999999999987543211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......++..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---- 207 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM---- 207 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH----
Confidence 0111223577899999998888999999999999999999999998432211
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
...... .... .+.. .......+.+++.+||+.+|++||++.+++..
T Consensus 208 -~~~~~~-~~~~------~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 208 -RVLFLI-PKNN------PPTL-----TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -hHhhhh-hcCC------CCCC-----chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 111100 0000 0111 12344568899999999999999999999654
No 258
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.9e-36 Score=318.23 Aligned_cols=249 Identities=22% Similarity=0.272 Sum_probs=189.2
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+++.+. ++.+|+|++.+. .......+..|+.++..++|+||+++++++.+.+..++||||+++|
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g 86 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGG 86 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCC
Confidence 479999999999999865 788999998653 1222345888999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~-- 156 (332)
T cd05623 87 DLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-- 156 (332)
T ss_pred cHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCC--
Confidence 9999997643 358899999999999999999999 899999999999999999999999999987542111
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 157 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 157 -------------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred -------------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 01112345789999999986 346789999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISDA 705 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 705 (714)
+..+............ .-+... ......+.+++.+|+..++++ |++++|+++.
T Consensus 212 -----~~~~~~~~i~~~~~~~---~~p~~~-----~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 212 -----SLVETYGKIMNHKERF---QFPAQV-----TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -----CHHHHHHHHhCCCccc---cCCCcc-----ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 2222222222221110 001000 112235778888888654444 6889888754
No 259
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-35 Score=308.50 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=192.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||++... ++..||+|.+... .......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l 86 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSL 86 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCH
Confidence 37999999999999986 6899999988754 333446789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
..++..... ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 156 (286)
T cd06622 87 DKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS----- 156 (286)
T ss_pred HHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-----
Confidence 998875421 13689999999999999999999962 48999999999999999999999999998754211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC------CCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK------PSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
......++..|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 157 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 211 (286)
T cd06622 157 -------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET 211 (286)
T ss_pred -------------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc
Confidence 011223567799999985543 4889999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ......+....... .+.... .....+.+++.+||+.+|++||+++++++
T Consensus 212 ~--~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 212 Y--ANIFAQLSAIVDGD-------PPTLPS-----GYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred h--hhHHHHHHHHhhcC-------CCCCCc-----ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1 11111111111111 011111 12346789999999999999999999886
No 260
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=319.44 Aligned_cols=240 Identities=25% Similarity=0.393 Sum_probs=192.7
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeC--C--CCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCc--eeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLG--E--GGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE--KLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~--~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lV~e~~ 481 (714)
.+||+|.|-+||||.+.. |..||=-.++ + ......++|..|+++|+.|+|||||++++++.+... .-+|+|.|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 379999999999999753 7777532222 1 133445789999999999999999999999987665 56889999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANI 560 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~ 560 (714)
..|+|..|+++. ++++...+++|++||++||.|||+..| +|||||||-.||+|+.+ |.+||+|.|+|.....
T Consensus 126 TSGtLr~Y~kk~------~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 126 TSGTLREYRKKH------RRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cCCcHHHHHHHh------ccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 999999999877 457888999999999999999999886 99999999999999865 8999999999998753
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
. ......|||-|||||++. ..|++.+||||||+.++||+|+.+||....
T Consensus 199 s------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~ 247 (632)
T KOG0584|consen 199 S------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT 247 (632)
T ss_pred c------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC
Confidence 2 223367899999999997 789999999999999999999999995432
Q ss_pred CCcchhHHHHHHHHhhcCC--cccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKP--LADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ..+.++......++ +..+-|| ++.+||.+|+.. .++|||+.|++.
T Consensus 248 n----~AQIYKKV~SGiKP~sl~kV~dP-------------evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 248 N----PAQIYKKVTSGIKPAALSKVKDP-------------EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred C----HHHHHHHHHcCCCHHHhhccCCH-------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence 2 23333333333221 1122222 578999999999 999999999875
No 261
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.6e-36 Score=318.67 Aligned_cols=250 Identities=21% Similarity=0.300 Sum_probs=185.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
..||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++... ...++++|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 100 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTN 100 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEee
Confidence 47999999999999975 578999999876422 2345678999999999999999999987543 34689999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
++ +++|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++...
T Consensus 101 ~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 101 LM-GADLNNIVKC-------QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 88 7799888753 348999999999999999999999 899999999999999999999999999987542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 170 ~~-------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 170 DE-------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC-------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 11 112346888999999876 5689999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccC-----------CCCCCCCC--c----HHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLD-----------PYLAPDAD--K----EEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d-----------~~~~~~~~--~----~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
... .+....+.... .....+... ..+..... . ......+.+++.+|++.||++|||++|
T Consensus 219 ~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 219 NDY--IDQLKRIMEVV--GTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred CCH--HHHHHHHHHHh--CCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 211 11111110000 000000000 00000000 0 001124679999999999999999999
Q ss_pred HHH
Q 005102 702 ISD 704 (714)
Q Consensus 702 vl~ 704 (714)
+++
T Consensus 295 ll~ 297 (343)
T cd07878 295 ALA 297 (343)
T ss_pred Hhc
Confidence 985
No 262
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=9.3e-36 Score=309.97 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=187.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEe-----CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS-----VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-----~~~~~lV~e~~ 481 (714)
..||+|+||.||++... +++.+|+|++..... ...++.+|+.+++++ +||||+++++++.. .+..++||||+
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 102 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELC 102 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeec
Confidence 36999999999999875 478999998865322 235688999999999 69999999998853 34679999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++++|.+++...... ...+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 103 ~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 177 (286)
T cd06638 103 NGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 177 (286)
T ss_pred CCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEEccCCceeecccC
Confidence 999999987642111 1458899999999999999999999 89999999999999999999999999998754321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
. .......|+..|+|||++.. ..++.++|||||||++|||++|+.||
T Consensus 178 ~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~ 229 (286)
T cd06638 178 R----------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL 229 (286)
T ss_pred C----------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCC
Confidence 0 01122346788999999853 45788999999999999999999998
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
...... .... .... .. .....++. .....+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~----~~~~-~~~~-~~-~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 230 ADLHPM----RALF-KIPR-NP-PPTLHQPE--------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CCCchh----HHHh-hccc-cC-CCcccCCC--------CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 432111 1111 0000 00 00111111 112358899999999999999999999864
No 263
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.1e-35 Score=305.87 Aligned_cols=257 Identities=20% Similarity=0.329 Sum_probs=191.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 86 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTV 86 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccH
Confidence 46999999999999986 48999999986542 2233568899999999999999999999999999999999999988
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|..++... ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 87 LNELEKNP------RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred HHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 88876543 358999999999999999999999 8999999999999999999999999999876532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......
T Consensus 156 --------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-- 207 (286)
T cd07847 156 --------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-- 207 (286)
T ss_pred --------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH--
Confidence 0112234677999999876 45789999999999999999999999533221
Q ss_pred hhHHHHHHHHhhc-----------CCcccccCCCCCCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEK-----------KPLADVLDPYLAPDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~-----------~~~~~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+............ ........+........ ......+.+++.+||+.+|++|||+.|++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 208 DQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 1111111111000 00000000110000000 011346789999999999999999999874
No 264
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2e-35 Score=304.61 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=193.7
Q ss_pred ccccccCceEEEEEEECC--CcEEEEEEeCCC----------CchhHHHHHHHHHHHhc-cCCCCccceEEEEEeCCcee
Q 005102 409 FVLGKSGIGIVYKVVLED--GHTLAVRRLGEG----------GSQRFKEFQTEVEAIGK-IRHSNIVTLRAYYWSVDEKL 475 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~ 475 (714)
+.||+|+||.||+|.++. ++.+|+|.+... ......++.+|+.++.+ ++||||+++++++...+..+
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 85 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLY 85 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEE
Confidence 369999999999999865 688999987532 22234567789988875 79999999999999999999
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
+||||+++++|.+++...... ...+++..+++++.|++.||.|||+. .+++|+||||+||++++++.+||+|||++
T Consensus 86 lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 86 IVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred EEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999987532111 14588999999999999999999952 57999999999999999999999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.|
T Consensus 162 ~~~~~~~-----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 162 KQKQPES-----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeccccc-----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 7543210 11223457789999999988899999999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
|... +............. .+... ......+.+++.+||+.||++||++.|+.+++++
T Consensus 213 ~~~~-----~~~~~~~~~~~~~~------~~~~~-----~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 213 FYST-----NMLSLATKIVEAVY------EPLPE-----GMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred cccc-----CHHHHHHHHhhccC------CcCCc-----ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 8432 11111211111111 01000 0122368899999999999999999999998863
No 265
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.5e-35 Score=305.86 Aligned_cols=255 Identities=23% Similarity=0.300 Sum_probs=193.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~g 484 (714)
+.||.|++|.||++..+ +++.+|+|.+..... ....++.+|++++++++||||++++++|... +..++||||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 86 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG 86 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence 47999999999999985 488999999876433 3456789999999999999999999998654 3679999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++...... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++.......
T Consensus 87 ~L~~~l~~~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 159 (287)
T cd06621 87 SLDSIYKKVKKR--GGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-- 159 (287)
T ss_pred CHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccccc--
Confidence 999887532211 1458899999999999999999999 899999999999999999999999999986542110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 160 ----------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 211 (287)
T cd06621 160 ----------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL 211 (287)
T ss_pred ----------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC
Confidence 0112346679999999988999999999999999999999999954422111
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+.......... ... ....... ......+.+++.+||+.+|++|||+.|+++
T Consensus 212 ~~~~~~~~~~~~~~--~~~-~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 212 GPIELLSYIVNMPN--PEL-KDEPGNG---IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ChHHHHHHHhcCCc--hhh-ccCCCCC---CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 12222211111110 111 1000000 112346889999999999999999999986
No 266
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.6e-36 Score=318.79 Aligned_cols=248 Identities=22% Similarity=0.276 Sum_probs=188.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+++.. +++.||+|.+.+. .......+.+|+.++..++|+||+++++++...+..|+||||+++|
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg 86 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGG 86 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999976 4789999998753 2223355888999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 156 (331)
T cd05624 87 DLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG-- 156 (331)
T ss_pred cHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--
Confidence 9999997642 358899999999999999999999 899999999999999999999999999987543211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 157 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 157 -------------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred -------------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 011122457889999999875 46789999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~ 704 (714)
. ..+............ . +.+.. .....++.+++.+|+..++++ |++++++++
T Consensus 212 ~-----~~~~~~~i~~~~~~~-~-~p~~~------~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 212 S-----LVETYGKIMNHEERF-Q-FPSHI------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred C-----HHHHHHHHHcCCCcc-c-CCCcc------ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 1 112222222111100 0 00100 112336778999998865544 467877764
No 267
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.2e-35 Score=305.72 Aligned_cols=243 Identities=21% Similarity=0.321 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|++|.||++... +++.+|+|++........+.+.+|+.++++++||||+++++++...+..++|+||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~ 104 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT 104 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence 48999999999999964 58899999987655555567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... ++++.++..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||.+.......
T Consensus 105 ~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~----- 169 (285)
T cd06648 105 DIVTHT-------RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV----- 169 (285)
T ss_pred HHHHhC-------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-----
Confidence 998652 37889999999999999999999 899999999999999999999999999886542110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||.... ..
T Consensus 170 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~ 221 (285)
T cd06648 170 -----------------------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PL 221 (285)
T ss_pred -----------------------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HH
Confidence 01112346788999999988889999999999999999999999984321 12
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+........ +..... ......+.+++.+||+.+|++|||+.++++
T Consensus 222 ~~~~~~~~~~~-------~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 222 QAMKRIRDNLP-------PKLKNL---HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHhcCC-------CCCccc---ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 22222211111 111100 012236889999999999999999999985
No 268
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.1e-35 Score=302.69 Aligned_cols=246 Identities=22% Similarity=0.334 Sum_probs=187.6
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC-----chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-----SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e 479 (714)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++... +..+++||
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 357999999999999975 48999999886432 12345688999999999999999999998753 56789999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 87 ~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 87 YMPGGSVKDQLKAY------GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred CCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99999999999754 347899999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 158 TICMS-------------------------GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred ccccc-------------------------CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 21000 00111233577899999999888999999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. ...+....... ..+.... .....+.+++ +||..+|++||+++||++
T Consensus 213 ~~-----~~~~~~~~~~~------~~~~~~~-----~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 213 EA-----MAAIFKIATQP------TNPQLPS-----HISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ch-----HHHHHHHhcCC------CCCCCch-----hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11 11111111110 1121111 1122455565 788899999999999974
No 269
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.6e-35 Score=308.60 Aligned_cols=263 Identities=16% Similarity=0.229 Sum_probs=197.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++.... ++.||+|.+..... ...+.+.+|+++++.++||||+++++.+...+..++||||++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 86 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGG 86 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence 479999999999999764 78999999876532 23457889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++........
T Consensus 87 ~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 87 DCATLLKNI------GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 999999654 358899999999999999999999 89999999999999999999999999998743211100
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
..... ..... ..........++..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~-~~~~~------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~---- 220 (305)
T cd05609 158 NLYEG-HIEKD------------TREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT---- 220 (305)
T ss_pred ccccc-ccccc------------hhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----
Confidence 00000 00000 00011112346778999999988889999999999999999999999995321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
..++.......... .+.... .....+.+++.+||+.||++||++.++.+.|+.
T Consensus 221 -~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 221 -PEELFGQVISDDIE-----WPEGDE-----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred -HHHHHHHHHhcccC-----CCCccc-----cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 12222222221111 111111 122357899999999999999997777766654
No 270
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.2e-35 Score=310.11 Aligned_cols=258 Identities=22% Similarity=0.331 Sum_probs=188.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||+|+||.||+|..+ +++.||+|.+..... .....+.+|++++++++|+||+++++++...+..++||||+++ +|
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L 89 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DL 89 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CH
Confidence 47999999999999976 589999999875432 2234577899999999999999999999999999999999974 99
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..++.++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++.......
T Consensus 90 ~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--- 158 (291)
T cd07844 90 KQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--- 158 (291)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc---
Confidence 99887553 357899999999999999999999 8999999999999999999999999999864321100
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......++..|+|||++.+ ..++.++||||+|+++|||++|+.||........
T Consensus 159 -------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~- 212 (291)
T cd07844 159 -------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED- 212 (291)
T ss_pred -------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH-
Confidence 0011124677999999865 4579999999999999999999999953321111
Q ss_pred hHHHHHHHHhhcC--------CcccccC---CCCC-----CCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK--------PLADVLD---PYLA-----PDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~--------~~~~~~d---~~~~-----~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............. ....... +... ...........+.+++.+||+.+|++|||+.|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 1111100000000 0000000 0000 00000011146779999999999999999999874
No 271
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.7e-35 Score=301.22 Aligned_cols=247 Identities=28% Similarity=0.420 Sum_probs=196.1
Q ss_pred ccccccCceEEEEEEECC-----CcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-----GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||++++.+ +..||+|++...... ..+.+..|++.+.+++|+||+++++++...+..+++|||++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~ 84 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYME 84 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccC
Confidence 479999999999999864 388999999765443 45789999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+++|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++......
T Consensus 85 ~~~l~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 85 GGDLLDYLRKNRP----KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred CCCHHHHHHhhhh----ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999976532 128999999999999999999999 899999999999999999999999999987654321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. ......++..|+|||.+.+..++.++||||+|+++|||++ |+.||...
T Consensus 158 ~~---------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-- 208 (258)
T smart00219 158 YY---------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-- 208 (258)
T ss_pred cc---------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--
Confidence 00 0001124677999999988889999999999999999999 77887431
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
......+....... ..... ....++.+++.+||..||++|||+.|+++.|
T Consensus 209 ---~~~~~~~~~~~~~~-------~~~~~-----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 209 ---SNEEVLEYLKKGYR-------LPKPE-----NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CHHHHHHHHhcCCC-------CCCCC-----cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11222222221111 00011 1234688999999999999999999998764
No 272
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-35 Score=301.69 Aligned_cols=242 Identities=28% Similarity=0.392 Sum_probs=192.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-----chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-----SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP 85 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence 47999999999999986 68999999886543 2244678999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+++|.+++... ..+++..+..++.|++.||+|||+ .+|+|+||+|+||+++.++.+||+|||++.......
T Consensus 86 ~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 86 GGSLAKLLKKY------GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999754 358899999999999999999999 899999999999999999999999999987543211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
......++..|+|||.+.... ++.++|+||||+++|||++|+.||.....
T Consensus 157 -----------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~ 207 (258)
T cd06632 157 -----------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG 207 (258)
T ss_pred -----------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH
Confidence 011234577899999987766 89999999999999999999999943321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
......... .... +..... ....+.+++.+||+.+|++||++.+++.
T Consensus 208 -----~~~~~~~~~-~~~~-----~~~~~~-----~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 208 -----VAAVFKIGR-SKEL-----PPIPDH-----LSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -----HHHHHHHHh-cccC-----CCcCCC-----cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 111111111 0111 111111 1235778999999999999999999875
No 273
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.8e-35 Score=302.59 Aligned_cols=244 Identities=22% Similarity=0.348 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||++... +|+.||+|++... .....+++.+|++++++++||||+++++++...+..++||||+++++
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGD 85 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCc
Confidence 47999999999999875 5899999998653 23344678999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++.++.+++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++.......
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~--- 155 (256)
T cd08218 86 LYKKINAQRG----VLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV--- 155 (256)
T ss_pred HHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch---
Confidence 9999875432 357899999999999999999999 899999999999999999999999999987543210
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||... +
T Consensus 156 -------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~ 205 (256)
T cd08218 156 -------------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----N 205 (256)
T ss_pred -------------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----C
Confidence 0011223577899999999888999999999999999999999998432 1
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+.+........ +.... .....+.+++.+||+.+|++||++.+|++
T Consensus 206 ~~~~~~~~~~~~~-------~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 206 MKNLVLKIIRGSY-------PPVSS-----HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHHHHhcCCC-------CCCcc-----cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1222222221111 11111 12336889999999999999999999986
No 274
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.9e-35 Score=308.65 Aligned_cols=244 Identities=22% Similarity=0.356 Sum_probs=194.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||++... +++.||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHH
Confidence 47999999999999864 58899999987655555577899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~----- 169 (293)
T cd06647 105 DVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 169 (293)
T ss_pred HHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccc-----
Confidence 998643 37889999999999999999999 899999999999999999999999999886543211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......+++.|+|||.+.+..++.++|||||||++||+++|+.||........ +.
T Consensus 170 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~ 225 (293)
T cd06647 170 -----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY 225 (293)
T ss_pred -----------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-ee
Confidence 011123467789999999888899999999999999999999999943221110 00
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
....... +... ........+.+++.+||+.+|++||++++++..
T Consensus 226 ----~~~~~~~-------~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 226 ----LIATNGT-------PELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ----ehhcCCC-------CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0010 111123467899999999999999999999864
No 275
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=291.07 Aligned_cols=267 Identities=21% Similarity=0.301 Sum_probs=208.7
Q ss_pred CHHHHHHhccccccccCceEEEEEE-ECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeE
Q 005102 399 DLDELLKASAFVLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLL 476 (714)
Q Consensus 399 ~~~~l~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 476 (714)
.++|+++-++++||+|.|+.|--++ ..+|.++|||++.+.....+.+..+|++++.+++ |+||++++++|++....||
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL 153 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL 153 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence 4688888889999999999999887 6789999999999887677788999999999995 9999999999999999999
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcccc
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSDFG 553 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFG 553 (714)
|||-|.+|.|..+++++ ..+++.++.++.++|+.||.|||. +||.||||||+|||..+.. -+||+||.
T Consensus 154 VfEKm~GGplLshI~~~------~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKR------KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred EEecccCchHHHHHHHh------hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccc
Confidence 99999999999999877 458999999999999999999999 9999999999999997654 47999998
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHH
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~e 628 (714)
++.-...... .+...+....+.+|+..|||||+.. ...|+.+.|.||+|||+|-
T Consensus 225 LgSg~k~~~~---------------------~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYI 283 (463)
T KOG0607|consen 225 LGSGIKLNND---------------------CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYI 283 (463)
T ss_pred cccccccCCC---------------------CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHH
Confidence 8764322110 1111133445677888999999873 2358999999999999999
Q ss_pred HHhCCCccccCCCCc-----chh-----HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 629 MITGRTAVVQVGSSE-----MDL-----VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 629 lltG~~p~~~~~~~~-----~~l-----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
|++|.+||...-..+ .+. ...+..+.+... -.++.+......+..+++...+..|+.+|-+
T Consensus 284 mLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY---------eFPdkdWahIS~eakdlisnLlvrda~~rls 354 (463)
T KOG0607|consen 284 MLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY---------EFPDKDWAHISSEAKDLISNLLVRDAKQRLS 354 (463)
T ss_pred HHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC---------cCChhhhHHhhHHHHHHHHHHHhccHHhhhh
Confidence 999999994332211 111 111111111111 1122233345556778999999999999999
Q ss_pred HHHHHH
Q 005102 699 MRHISD 704 (714)
Q Consensus 699 ~~evl~ 704 (714)
+.+++.
T Consensus 355 a~~vln 360 (463)
T KOG0607|consen 355 AAQVLN 360 (463)
T ss_pred hhhccC
Confidence 988875
No 276
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.8e-35 Score=302.67 Aligned_cols=247 Identities=26% Similarity=0.377 Sum_probs=198.0
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.||+|+||.||++..+ +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++|+||+++++|.
T Consensus 8 ~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (265)
T cd06605 8 ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLD 87 (265)
T ss_pred HhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHH
Confidence 6999999999999986 58999999987653 344567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++..+.+++.|++.||+|||+. .+++|+||||+||++++++.+||+|||.+.......
T Consensus 88 ~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 155 (265)
T cd06605 88 KILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL----- 155 (265)
T ss_pred HHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----
Confidence 9997653 3588899999999999999999983 589999999999999999999999999987553211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...........
T Consensus 156 -------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (265)
T cd06605 156 -------------------------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF 210 (265)
T ss_pred -------------------------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH
Confidence 0013456779999999988999999999999999999999999954432223333
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.++....... +.... ......+.+++.+||..||++|||+.+++.
T Consensus 211 ~~~~~~~~~~~-------~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 211 ELLQYIVNEPP-------PRLPS----GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHhcCCC-------CCCCh----hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 33333222211 11111 112346889999999999999999999875
No 277
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.3e-35 Score=303.86 Aligned_cols=250 Identities=20% Similarity=0.324 Sum_probs=194.0
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC------chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG------SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||++.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~ 85 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWM 85 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEecc
Confidence 5799999999999986 458999999987532 123467899999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANI 560 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~ 560 (714)
++++|.+++... ..+++..+..++.|++.||+|||+ ++++|+||||+||+++.++ .+||+|||.+.....
T Consensus 86 ~~~~L~~~l~~~------~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 86 AGGSVSHLLSKY------GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred CCCcHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999754 458899999999999999999999 8999999999999998776 599999999876542
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
..... ........++..|+|||.+.+..++.++||||+|+++|||++|+.||....
T Consensus 157 ~~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 212 (268)
T cd06630 157 KGTGA------------------------GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEK 212 (268)
T ss_pred ccccC------------------------CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 21000 001122346778999999988889999999999999999999999994322
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. ............. ..+... ......+.+++.+||..+|++|||+.++++
T Consensus 213 ~~--~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 213 HS--NHLALIFKIASAT------TAPSIP-----EHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred Cc--chHHHHHHHhccC------CCCCCc-----hhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11 1111111111000 111111 122346889999999999999999999874
No 278
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.7e-35 Score=305.31 Aligned_cols=241 Identities=21% Similarity=0.224 Sum_probs=183.3
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHh---ccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIG---KIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+||+|+||.||++... +++.+|+|.+..... .....+.+|..++. ..+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999975 489999998865421 11233444544433 3479999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++... ..+++..+..|+.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 81 ~~~L~~~i~~~------~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~- 150 (279)
T cd05633 81 GGDLHYHLSQH------GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK- 150 (279)
T ss_pred CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceecccc-
Confidence 99999988755 458999999999999999999999 89999999999999999999999999998643211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
......|+..|+|||.+.. ..++.++|||||||++|||++|+.||.....
T Consensus 151 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 201 (279)
T cd05633 151 -----------------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 201 (279)
T ss_pred -----------------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC
Confidence 0112246888999999864 5589999999999999999999999954322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
.... ........ ....+... ...++.+++.+||+.||++|| |++|+++
T Consensus 202 ~~~~---~~~~~~~~-------~~~~~~~~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 202 KDKH---EIDRMTLT-------VNVELPDS-----FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cCHH---HHHHHhhc-------CCcCCccc-----cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 2111 11111000 11111111 223678999999999999999 5888876
No 279
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8.8e-36 Score=310.09 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=190.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 86 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTV 86 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccH
Confidence 47999999999999986 489999999865432 234578899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|..+.... ..+++.+++.++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||+++......
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 87 LDDLEKYP------NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred HHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 88876543 348999999999999999999999 899999999999999999999999999987543211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||..... .
T Consensus 155 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~ 207 (286)
T cd07846 155 -------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--I 207 (286)
T ss_pred -------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch--H
Confidence 01112335778999999875 4478899999999999999999988843211 1
Q ss_pred hhHHHHHHHHhh-----------cCCcccccCCCCCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEE-----------KKPLADVLDPYLAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+...-....... .........+....... .......+.+++.+||+.+|++|||+.++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 208 DQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 111100000000 00000000010000000 0012346889999999999999999999875
No 280
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.1e-35 Score=306.92 Aligned_cols=257 Identities=22% Similarity=0.309 Sum_probs=189.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|++|.||+|+.+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+. ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 84 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cC
Confidence 46899999999999975 58999999987542 2223578899999999999999999999999999999999995 68
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||+++......
T Consensus 85 l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--- 154 (284)
T cd07860 85 LKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--- 154 (284)
T ss_pred HHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc---
Confidence 9998875432 458999999999999999999999 899999999999999999999999999987543211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+.. ++.++|||||||++|||+||+.||..... ..
T Consensus 155 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~ 208 (284)
T cd07860 155 -------------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-ID 208 (284)
T ss_pred -------------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HH
Confidence 0111223467799999887644 58899999999999999999999953221 11
Q ss_pred hhHHHHHHHHhh--------------cCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEE--------------KKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.........-.. ............... .......+.+++.+||+.||++|||++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 209 QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKV--VPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHH--cccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 111111100000 000000000000000 0011235678999999999999999999874
No 281
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.9e-35 Score=302.90 Aligned_cols=249 Identities=25% Similarity=0.397 Sum_probs=191.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc----------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS----------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 477 (714)
+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 86 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIF 86 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEE
Confidence 57999999999999865 589999998864211 1124678899999999999999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 87 ~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 87 LEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred EecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999765 358899999999999999999999 8999999999999999999999999999875
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC--CCchhhhHHHHHHHHHHHhCCCc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK--PSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DVwS~Gvvl~elltG~~p 635 (714)
...... ........|+..|+|||.+.... ++.++||||||+++||+++|+.|
T Consensus 158 ~~~~~~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p 211 (272)
T cd06629 158 SDDIYD--------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP 211 (272)
T ss_pred cccccc--------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCC
Confidence 421100 00112234577899999987654 78999999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|..... ...... ..... ....+...... .....+.+++.+||..+|++|||+++|++
T Consensus 212 ~~~~~~----~~~~~~-~~~~~--~~~~~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 212 WSDEEA----IAAMFK-LGNKR--SAPPIPPDVSM-----NLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CcCcch----HHHHHH-hhccc--cCCcCCccccc-----cCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 842211 111111 11010 01111111111 12346889999999999999999999875
No 282
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.5e-35 Score=307.61 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=188.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeC-----CceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSV-----DEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-----~~~~lV~e~~ 481 (714)
..||+|+||.||++... +++.+|+|.+..... ....+.+|+.++.++ +|||++++++++... +..++||||+
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~ 106 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELC 106 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEEC
Confidence 47999999999999975 588999999875432 235678899999999 799999999998754 3579999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.++++..... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 107 ~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 181 (291)
T cd06639 107 NGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 181 (291)
T ss_pred CCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEeecccchhcccc
Confidence 999999988642111 1458999999999999999999999 89999999999999999999999999998764321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-----CCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-----KPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
.. ......|+..|+|||.+... .++.++|||||||++|||++|+.||
T Consensus 182 ~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~ 233 (291)
T cd06639 182 RL----------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233 (291)
T ss_pred cc----------------------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCC
Confidence 10 01123457789999998543 3689999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..... ... +..... .. .....++ ......+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~----~~~-~~~~~~-~~-~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 234 FDMHP----VKT-LFKIPR-NP-PPTLLHP--------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCcH----HHH-HHHHhc-CC-CCCCCcc--------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 43211 111 111111 10 1111111 112336889999999999999999999875
No 283
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.7e-35 Score=307.38 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=188.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEe------CCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS------VDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~------~~~~~lV~e~ 480 (714)
..||+|+||.||+|... +++.+|+|.+.... ....++..|+.+++++ +||||+++++++.. .+..++||||
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 100 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEF 100 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEe
Confidence 37999999999999975 48899999886543 2335788999999999 69999999999863 3567999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++....
T Consensus 101 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 101 CGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred CCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 999999999875432 347888899999999999999999 8999999999999999999999999999875432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.. .......|+..|+|||.+. +..++.++|||||||++|||++|+.|
T Consensus 174 ~~----------------------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p 225 (282)
T cd06636 174 TV----------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP 225 (282)
T ss_pred cc----------------------------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCC
Confidence 11 0112234678899999985 34678899999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|...... .... .. ... ..+... .......+.+++.+||+.||.+|||+.|+++
T Consensus 226 ~~~~~~~----~~~~-~~-~~~------~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 226 LCDMHPM----RALF-LI-PRN------PPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ccccCHH----hhhh-hH-hhC------CCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 9432211 1000 00 000 011111 1112346889999999999999999999874
No 284
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.7e-35 Score=298.63 Aligned_cols=243 Identities=21% Similarity=0.312 Sum_probs=192.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||++... +++.+|+|.+... .....+.+.+|++++++++||||+++++.+...+..++||||+++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGT 85 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCC
Confidence 47999999999999875 5889999998754 23345678999999999999999999999998899999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++..... ..+++..+.+++.|++.||+|||+ ++++|+||||+||+++++ +.+||+|||+++......
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-- 156 (256)
T cd08220 86 LAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-- 156 (256)
T ss_pred HHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--
Confidence 9999976532 358899999999999999999999 899999999999999865 468999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~---- 205 (256)
T cd08220 157 ---------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN---- 205 (256)
T ss_pred ---------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc----
Confidence 1112335778999999998889999999999999999999999984321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ .. .... ....+.+++.+||+.+|++|||++|+++
T Consensus 206 -~~~~~~~~~~~~~--~~-----~~~~-----~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 206 -LPALVLKIMSGTF--AP-----ISDR-----YSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -hHHHHHHHHhcCC--CC-----CCCC-----cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1112211111111 11 1111 1235789999999999999999999975
No 285
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.8e-35 Score=306.10 Aligned_cols=237 Identities=22% Similarity=0.288 Sum_probs=191.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 86 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGG 86 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCC
Confidence 47999999999999976 48999999987532 233467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+|+||+|+||++++++.+||+|||+++.....
T Consensus 87 ~L~~~~~~~------~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 87 ELFSHLRKS------GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 999998765 458899999999999999999999 89999999999999999999999999998754311
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.....+++.|+|||.+.+...+.++||||||+++|||++|+.||....
T Consensus 155 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---- 202 (290)
T cd05580 155 ----------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---- 202 (290)
T ss_pred ----------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----
Confidence 112235778999999988888999999999999999999999994322
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHIS 703 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl 703 (714)
.....+....... .+.... ...+.+++.+||..||.+|| +++|++
T Consensus 203 -~~~~~~~~~~~~~--------~~~~~~-----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 203 -PIQIYEKILEGKV--------RFPSFF-----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred -HHHHHHHHhcCCc--------cCCccC-----CHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 1111111111111 111111 23577999999999999998 666665
No 286
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.3e-35 Score=305.77 Aligned_cols=243 Identities=22% Similarity=0.337 Sum_probs=193.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
..||+|+||.||++... +++.||||++........+.+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 36999999999999875 58999999987655555677999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.. ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||++.......
T Consensus 106 ~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~----- 170 (292)
T cd06657 106 DIVTH-------TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 170 (292)
T ss_pred HHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc-----
Confidence 98753 247899999999999999999999 899999999999999999999999999876442110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||... ...
T Consensus 171 -----------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~--~~~--- 222 (292)
T cd06657 171 -----------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPL--- 222 (292)
T ss_pred -----------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHH---
Confidence 0112234678899999998888999999999999999999999998422 111
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+........ +..... ......+.+++.+||+.+|.+||++.++++
T Consensus 223 ~~~~~~~~~~~-------~~~~~~---~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 223 KAMKMIRDNLP-------PKLKNL---HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHhhCC-------cccCCc---ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 11111111110 111000 011235778999999999999999999886
No 287
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4e-35 Score=307.11 Aligned_cols=258 Identities=21% Similarity=0.294 Sum_probs=191.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch-----hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ-----RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|... +++.||||++...... ....+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 84 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM- 84 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-
Confidence 47999999999999975 5899999999765322 2345778999999999999999999999989999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..++.||++||+|||+ .+|+|+||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 85 ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 899999997652 258999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
. ......+++.|+|||.+.+ ..++.++|||||||++|||++|..||....
T Consensus 157 ~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~- 207 (298)
T cd07841 157 R----------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS- 207 (298)
T ss_pred c----------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-
Confidence 0 0111234667999998854 457899999999999999999977774321
Q ss_pred CcchhHHHHHHHHhhc--------CCcccccCCCCCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEK--------KPLADVLDPYLAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~--------~~~~~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
+.+...-........ ................ .......+.+++.+||+.||++|||++|+++.
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 208 -DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred -cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 111111111000000 0000000000000000 01223568899999999999999999999873
No 288
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.2e-35 Score=299.75 Aligned_cols=246 Identities=22% Similarity=0.299 Sum_probs=188.5
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCC-----chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG-----SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e 479 (714)
.+.||+|+||.||+|...+ +..||||.+.... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 3579999999999999754 8999999886421 12345788999999999999999999998764 45789999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++++|.+++... ..+++..+++++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+++...
T Consensus 87 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 87 HMPGGSIKDQLKSY------GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred ecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 99999999998754 347888999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
..... ........++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 158 ~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 158 TICLS-------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred ccccc-------------------------ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 21000 00111234678899999998888999999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .... ........ ..+... ......+.+++.+||. +|++||+++|+++
T Consensus 213 ~----~~~~-~~~~~~~~------~~~~~~-----~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 213 E----AMAA-IFKIATQP------TNPVLP-----PHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred c----hHHH-HHHHhcCC------CCCCCc-----hhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1 1111 11111110 011111 1233467789999995 8999999999875
No 289
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8.2e-35 Score=306.12 Aligned_cols=239 Identities=23% Similarity=0.395 Sum_probs=188.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++||||+. |
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g 99 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 99 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-C
Confidence 47999999999999975 58999999986432 2334578899999999999999999999999999999999996 5
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
++.+++.... ..+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||+++.....
T Consensus 100 ~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--- 168 (307)
T cd06607 100 SASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--- 168 (307)
T ss_pred CHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC---
Confidence 7877775432 358999999999999999999999 89999999999999999999999999988653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
....++..|+|||++. ...++.++||||||+++|||+||+.||.....
T Consensus 169 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~ 219 (307)
T cd06607 169 -----------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (307)
T ss_pred -----------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH
Confidence 1123567799999874 45688999999999999999999999843211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....... .... .+.. ........+.+++.+||..||++||++.+++.
T Consensus 220 -----~~~~~~~-~~~~------~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 220 -----MSALYHI-AQND------SPTL----SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred -----HHHHHHH-hcCC------CCCC----CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111111 1100 0111 11123446889999999999999999999976
No 290
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5e-35 Score=309.16 Aligned_cols=273 Identities=23% Similarity=0.278 Sum_probs=198.4
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCch---hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQ---RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|...+ ++.||+|.+...... ..+.+..|++++++++||||+++++++...+..++||||+.++
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG 86 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence 479999999999999865 899999999765322 3457889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++....+ ..+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++.........
T Consensus 87 ~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 87 ELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred CHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99999875432 458999999999999999999999 89999999999999999999999999998865432211
Q ss_pred CCccCCCCCCCC-chhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEK-PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
............ .....................||..|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~- 238 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD- 238 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH-
Confidence 100000000000 000000000001111223446788999999999888999999999999999999999999533211
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC----HHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT----MRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt----~~evl~ 704 (714)
............ .... ......+.+++.+||..||++||| ++|++.
T Consensus 239 ----~~~~~~~~~~~~--------~~~~---~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 239 ----ETFSNILKKEVT--------FPGS---PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ----HHHHHHhcCCcc--------CCCc---cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 111111111110 0000 012346889999999999999999 666554
No 291
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-34 Score=299.02 Aligned_cols=241 Identities=23% Similarity=0.377 Sum_probs=192.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l 89 (277)
T cd06641 10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA 89 (277)
T ss_pred eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcH
Confidence 36999999999999875 58899999986543 23346788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.. ..+++..+..++.|++.|+.|||+ .+++|+||||+||+++.++.++|+|||+++......
T Consensus 90 ~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06641 90 LDLLEP-------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred HHHHhc-------CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch----
Confidence 999863 247899999999999999999999 899999999999999999999999999987543210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......++..|+|||.+.+..++.++|||||||++|||++|..||.....
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----- 206 (277)
T cd06641 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP----- 206 (277)
T ss_pred ------------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----
Confidence 011123457789999999888899999999999999999999999843211
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....... .... .+.... .....+.+++.+||+.+|++||++.++++
T Consensus 207 ~~~~~~~-~~~~------~~~~~~-----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 207 MKVLFLI-PKNN------PPTLEG-----NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred HHHHHHH-hcCC------CCCCCc-----ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1111111 1111 011111 12235789999999999999999999988
No 292
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.3e-35 Score=307.23 Aligned_cols=258 Identities=22% Similarity=0.365 Sum_probs=192.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|..+ +++.||+|+++.. .....+.+.+|++++++++|+||+++++++...+..++||||++++.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 86 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTL 86 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCH
Confidence 47999999999999986 4889999998754 22334678999999999999999999999999999999999999877
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+..+.... ..+++.++..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||+++.......
T Consensus 87 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 87 LELLEASP------GGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred HHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 76655433 348899999999999999999999 8999999999999999999999999999876542210
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||..... .
T Consensus 156 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~--~ 208 (288)
T cd07833 156 -------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD--I 208 (288)
T ss_pred -------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence 011223457789999999887 789999999999999999999999843221 1
Q ss_pred hhHHHHHHHHhhcC-Ccccc--cCCCCC-----CCC--------CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKK-PLADV--LDPYLA-----PDA--------DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~-~~~~~--~d~~~~-----~~~--------~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+............. ..... .++... ... .......++.+++.+||..+|++|||++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 209 DQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 11111111100000 00000 000000 000 00012456899999999999999999999875
No 293
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5e-35 Score=302.99 Aligned_cols=242 Identities=25% Similarity=0.386 Sum_probs=191.1
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCC-CchhHHHHHHHHHHHhccC---CCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIR---HSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|.+ .+++.||+|.+... .....+++.+|++++++++ |||++++++++......++||||+++
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG 86 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence 3699999999999997 45899999998764 2334567889999999997 99999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++... .+++..+..++.|++.||.|||+ .+|+|+||+|+||++++++.++|+|||++.......
T Consensus 87 ~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 87 GSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred CcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 9999988543 48899999999999999999999 899999999999999999999999999987653221
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......|+..|+|||.+.++ .++.++|||||||++|||++|+.||....
T Consensus 156 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-- 206 (277)
T cd06917 156 ---------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-- 206 (277)
T ss_pred ---------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC--
Confidence 011223467789999998654 46899999999999999999999994321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....... . .....+.+... .....+.+++.+||+.||++||++.|++.
T Consensus 207 ---~~~~~~~-~------~~~~~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 207 ---AFRAMML-I------PKSKPPRLEDN----GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ---hhhhhhc-c------ccCCCCCCCcc----cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1111110 0 00011111111 12346889999999999999999999965
No 294
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.5e-35 Score=302.20 Aligned_cols=243 Identities=23% Similarity=0.266 Sum_probs=188.4
Q ss_pred ccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||+||++... +|+.||+|.+.... ......+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 58999999986532 22234677899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++..... ..+++.++..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---- 149 (277)
T cd05577 81 KYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---- 149 (277)
T ss_pred HHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC----
Confidence 999876532 358999999999999999999999 899999999999999999999999999987643210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
......++..|+|||++.+..++.++|||||||++|+|++|+.||....... ..
T Consensus 150 -------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~ 203 (277)
T cd05577 150 -------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EK 203 (277)
T ss_pred -------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cH
Confidence 0112234667999999988889999999999999999999999994332211 11
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHIS 703 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl 703 (714)
.......... ....... ....+.+++.+||+.||++|| ++.+++
T Consensus 204 ~~~~~~~~~~--------~~~~~~~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 252 (277)
T cd05577 204 EELKRRTLEM--------AVEYPDK-----FSPEAKDLCEALLQKDPEKRLGCRGGSADEVR 252 (277)
T ss_pred HHHHhccccc--------cccCCcc-----CCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence 1111100000 0011111 123578999999999999999 555554
No 295
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.7e-35 Score=298.98 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=192.8
Q ss_pred ccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||.||+++... ++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6999999999999864 8999999987542 23346799999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.|++.||+|||+ ++++|+||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---- 147 (262)
T cd05572 81 WTILRDR------GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---- 147 (262)
T ss_pred HHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----
Confidence 9999765 348899999999999999999999 899999999999999999999999999987653210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
......++..|+|||.+.+..++.++||||||+++|||++|+.||.....+ .
T Consensus 148 -------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~ 199 (262)
T cd05572 148 -------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---P 199 (262)
T ss_pred -------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---H
Confidence 111224577799999998888999999999999999999999999543321 1
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
.+.......... ....+.. ....+.+++.+||..+|++||+ ++|+++
T Consensus 200 ~~~~~~~~~~~~------~~~~~~~-----~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 200 MEIYNDILKGNG------KLEFPNY-----IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHhccCC------CCCCCcc-----cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222222221110 0111111 1336889999999999999999 666654
No 296
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=319.40 Aligned_cols=266 Identities=26% Similarity=0.301 Sum_probs=198.6
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e~ 480 (714)
+.||+|+||.||+|+. ++|+.||||.+++... ...+...+|+++|++++|+|||++++.-.+.. ...+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 4799999999999995 5699999999988543 33466789999999999999999998865433 56899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee--CCCC--CeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL--GHNM--EPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl--~~~~--~~kl~DFGla~ 556 (714)
|.+|||...|.+.... ..|++.+.+.+..+++.||.|||+ ++|+||||||.||++ .++| .-||+|||.||
T Consensus 99 C~gGsL~~~L~~PEN~---~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENA---YGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred cCCCcHHHHhcCcccc---cCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 9999999999876543 569999999999999999999999 999999999999998 3334 46999999999
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.+++. ....+.+||..|.+||.+.. ..|+..+|.|||||++||.+||..|
T Consensus 173 el~d~-----------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 173 ELDDN-----------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred cCCCC-----------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 77542 24556789999999999984 7889999999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcC-CcccccCCCCC----------C-CCCcHHHHHHHHHHHhHccCCCCCCCC--CHHH
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKK-PLADVLDPYLA----------P-DADKEEEIIAVLKIAMACVHSSPEKRP--TMRH 701 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~----------~-~~~~~~~~~~l~~li~~Cl~~dP~~RP--t~~e 701 (714)
|........ ..+.+......+. ...-..++... . ..-.......+-..+..+|..+|++|. .+.+
T Consensus 224 F~p~~~pk~-~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~ 302 (732)
T KOG4250|consen 224 FIPFGGPKN-NKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDR 302 (732)
T ss_pred CCcCCCccc-cchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcch
Confidence 954333221 1111111111111 11111111111 0 001123344566777788888999998 6666
Q ss_pred HHHHHhhhh
Q 005102 702 ISDALDRLI 710 (714)
Q Consensus 702 vl~~L~~i~ 710 (714)
....+..|+
T Consensus 303 ~Fa~~~dIL 311 (732)
T KOG4250|consen 303 FFAEVDDIL 311 (732)
T ss_pred HHHHHHHHH
Confidence 666665554
No 297
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.1e-35 Score=305.98 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=187.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|+||+++++++...+..++||||+. +++
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l 89 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDL 89 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCH
Confidence 47999999999999875 589999999875432 223467889999999999999999999999999999999995 688
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 157 (291)
T cd07870 90 AQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---- 157 (291)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC----
Confidence 77765432 347788899999999999999999 899999999999999999999999999987532110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||.........
T Consensus 158 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~ 213 (291)
T cd07870 158 ------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ 213 (291)
T ss_pred ------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHH
Confidence 001122347789999998754 4788999999999999999999999533221111
Q ss_pred hHHHHHHHHh-----------hcCC-cccccCCCCCCCC----CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIE-----------EKKP-LADVLDPYLAPDA----DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~-----------~~~~-~~~~~d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+.+ .... .... ..+.......... ........+.+++.+|++.||++|||+.|++.
T Consensus 214 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 214 LEKIW-TVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHH-HHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 11110 0000 0000 0000000000000 00011346779999999999999999999864
No 298
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1e-34 Score=298.67 Aligned_cols=254 Identities=25% Similarity=0.411 Sum_probs=197.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++||||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l 86 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSL 86 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcH
Confidence 47999999999999965 57899999987543 23457899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++...... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++..+.......
T Consensus 87 ~~~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~- 159 (267)
T cd06610 87 LDIMKSSYPR---GGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT- 159 (267)
T ss_pred HHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-
Confidence 9999754221 358899999999999999999999 899999999999999999999999999998764321100
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........|+..|+|||++... .++.++|||||||++|||++|+.||.......
T Consensus 160 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-- 214 (267)
T cd06610 160 -----------------------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-- 214 (267)
T ss_pred -----------------------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--
Confidence 0011233467889999998776 78999999999999999999999995332211
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+....... .+..............+.+++.+||..||++|||++++++
T Consensus 215 ---~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 215 ---VLMLTLQND-------PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ---hHHHHhcCC-------CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111111111 0111111111122346789999999999999999999875
No 299
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.7e-35 Score=304.11 Aligned_cols=246 Identities=23% Similarity=0.320 Sum_probs=186.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHH-HhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEA-IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||++... +|+.||+|+++... .....++..|+.+ ++..+||||+++++++...+..++||||++ |+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TS 85 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-cc
Confidence 46999999999999976 58999999987653 2233456667765 566689999999999999999999999996 68
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++....... ..+++..+.+++.|++.||+|||+ + +++||||||+||++++++.+||+|||+++......
T Consensus 86 l~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (283)
T cd06617 86 LDKFYKKVYDKG--LTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-- 158 (283)
T ss_pred HHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccccc--
Confidence 888876432111 468999999999999999999998 6 89999999999999999999999999987542110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC----CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV----VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (283)
T cd06617 159 ---------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK 211 (283)
T ss_pred ---------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc
Confidence 0111235778999998865 446889999999999999999999994322
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... +......... .+..... .....+.+++.+||..+|++|||+.++++
T Consensus 212 ~~~----~~~~~~~~~~-------~~~~~~~----~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 212 TPF----QQLKQVVEEP-------SPQLPAE----KFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cCH----HHHHHHHhcC-------CCCCCcc----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 1111111111 1111111 12236889999999999999999999986
No 300
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.4e-35 Score=304.08 Aligned_cols=258 Identities=21% Similarity=0.323 Sum_probs=193.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+ +++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~ 84 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSD 84 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCC
Confidence 47999999999999975 58999999987653 233467899999999999999999999999999999999999 999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++.++..++.||+.||+|||+ .+++|+||||+||++++++.++|+|||+++.......
T Consensus 85 L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 85 LSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--
Confidence 999987543 458999999999999999999999 8999999999999999999999999999876532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+.. ++.++||||+|+++|||+||++||... .+.
T Consensus 155 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~--~~~ 207 (286)
T cd07832 155 -------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE--NDI 207 (286)
T ss_pred -------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC--CHH
Confidence 0111234678899999986544 689999999999999999997777322 111
Q ss_pred hhHHHHHHHHhhcC--------Cc---ccccCCCCCCCC---CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKK--------PL---ADVLDPYLAPDA---DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~--------~~---~~~~d~~~~~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.............. .+ ..+..+...... ...+....+.+++.+||+.+|++|||+++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 208 EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111111110000 00 000000000000 00012357889999999999999999999875
No 301
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.2e-35 Score=302.81 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=188.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++...+..+++|||+.. +
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~ 88 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-S 88 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-C
Confidence 47999999999999975 48999999987643 234567899999999996 99999999999998899999999864 6
Q ss_pred Hhhhh---hCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 486 LATAL---HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 486 L~~~l---~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+.++. ..... ..+++..+.+++.|++.||+|||+. .+++||||||+||+++.++.+||+|||+++......
T Consensus 89 l~~l~~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 89 LDKFYKYVYEVLK----SVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred HHHHHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 55543 22211 4589999999999999999999972 389999999999999999999999999997653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC---CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV---KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
......|+..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 163 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 163 -----------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred -----------------------------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 11122357789999999766 6899999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ...+.+....... .+.+..... .....++.+++.+||+.||++|||+++|++
T Consensus 214 ~----~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 214 N----SVFDQLTQVVKGD-------PPILSNSEE-REFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred c----hHHHHHhhhcCCC-------CCcCCCcCC-CccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2 1111111111111 111111110 123346889999999999999999999876
No 302
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.9e-35 Score=302.30 Aligned_cols=247 Identities=23% Similarity=0.335 Sum_probs=189.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCC------ceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVD------EKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~------~~~lV~e~ 480 (714)
+.||+|+||.||+|..+ +++.+++|++..... ..+.+.+|+++++++ +|+||+++++++.... ..++||||
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 90 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMEL 90 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEc
Confidence 47999999999999985 478999999876543 346789999999999 6999999999997654 37999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++++|.+++...... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 91 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 91 CGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDS 165 (275)
T ss_pred CCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCccceeccc
Confidence 9999999988653211 1458899999999999999999999 8999999999999999999999999999875432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.. .......|+..|+|||.+.. ..++.++|||||||++|||++|+.|
T Consensus 166 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p 217 (275)
T cd06608 166 TL----------------------------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217 (275)
T ss_pred ch----------------------------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCC
Confidence 11 11122346788999998753 3468899999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|...... .......... .+... ........+.+++.+||..||++|||++|+++
T Consensus 218 ~~~~~~~-----~~~~~~~~~~-------~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 218 LCDMHPM-----RALFKIPRNP-------PPTLK---SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccccchH-----HHHHHhhccC-------CCCCC---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 9432111 1111111110 01111 11123346889999999999999999999975
No 303
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=304.49 Aligned_cols=241 Identities=24% Similarity=0.240 Sum_probs=191.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch---hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ---RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+||+||||.||-++-+ +|+.+|.|++.+.... ...-..+|-.+|.+++.+.||.+--.|++.+..++|+..|.||
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG 270 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG 270 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence 58999999999999865 4999999998764322 2234678999999999999999998999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
||.-+|..... ..+++..++-++.+|+.||++||. .+||.|||||+|||+|++|+++|+|.|+|..+...
T Consensus 271 DLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g--- 340 (591)
T KOG0986|consen 271 DLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG--- 340 (591)
T ss_pred ceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCCC---
Confidence 99999876643 459999999999999999999999 99999999999999999999999999999866432
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......+||.+|||||++..+.|+...|.||+||++|||+.|+.||.......
T Consensus 341 --------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv- 393 (591)
T KOG0986|consen 341 --------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV- 393 (591)
T ss_pred --------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-
Confidence 12334578999999999999999999999999999999999999995432211
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
.-.+.-++...+...+. +.-.++..++....|.+||++|...
T Consensus 394 k~eEvdrr~~~~~~ey~-------------~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 394 KREEVDRRTLEDPEEYS-------------DKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hHHHHHHHHhcchhhcc-------------cccCHHHHHHHHHHHccCHHHhccC
Confidence 11111111111111111 1122356677788899999999643
No 304
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=302.33 Aligned_cols=240 Identities=22% Similarity=0.277 Sum_probs=197.6
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.||+|.|+.|-.|++- +|..||||++.+... .....+.+|++.|+-++|||||++|.+.......|||+|.=.+|+|
T Consensus 25 TlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl 104 (864)
T KOG4717|consen 25 TLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDL 104 (864)
T ss_pred hhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchH
Confidence 6999999999999864 699999999987533 3345688899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee-CCCCCeEEcccchhhhhhccCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-GHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl-~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
++++-.+. ..+.+..+.+++.||..|+.|+|. ..+|||||||+||.+ ..-|-+||.|||++-.+.+.
T Consensus 105 ~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG---- 172 (864)
T KOG4717|consen 105 FDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG---- 172 (864)
T ss_pred HHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCc----
Confidence 99997765 458899999999999999999999 789999999999876 55688999999998655432
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCC-chhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPS-QKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
....+..|+..|-|||++.|..|+ +++||||+|||||-|+.|+.||....+.+.
T Consensus 173 -------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET 227 (864)
T KOG4717|consen 173 -------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET 227 (864)
T ss_pred -------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence 234456778899999999999885 578999999999999999999954433221
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+..++|-...- +.....++.++|..||..||.+|.+.+||+.
T Consensus 228 ---------------LTmImDCKYtv---PshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 228 ---------------LTMIMDCKYTV---PSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ---------------hhhhhcccccC---chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22233322211 1234557899999999999999999999874
No 305
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.8e-35 Score=303.50 Aligned_cols=243 Identities=24% Similarity=0.384 Sum_probs=194.7
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|++.+++++|+||+++++++...+..++|+||+++++|.+
T Consensus 26 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 104 (286)
T cd06614 26 KIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTD 104 (286)
T ss_pred hccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHH
Confidence 6999999999999987 588999999976544 45678999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++........
T Consensus 105 ~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----- 171 (286)
T cd06614 105 IITQNF-----VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS----- 171 (286)
T ss_pred HHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-----
Confidence 998653 268999999999999999999999 8999999999999999999999999998865432110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVN 648 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~ 648 (714)
......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ..
T Consensus 172 -----------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-----~~ 223 (286)
T cd06614 172 -----------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-----LR 223 (286)
T ss_pred -----------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-----HH
Confidence 01122356779999999888899999999999999999999999842211 11
Q ss_pred HHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 649 WMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 649 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
......... .....++ ......+.+++.+||+.+|.+|||+.++++
T Consensus 224 ~~~~~~~~~--~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 224 ALFLITTKG--IPPLKNP--------EKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHHhcC--CCCCcch--------hhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111111111 1111110 112236889999999999999999999975
No 306
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.1e-34 Score=297.60 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=185.8
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHH-hccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAI-GKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|... +|+.||+|.+..... .....+..|..++ ...+|+|++++++++...+..++||||++++
T Consensus 3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 82 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGG 82 (260)
T ss_pred cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCC
Confidence 5899999999999975 489999999876432 1223445555554 4458999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+.+++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++....
T Consensus 83 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 83 DCASLIKTL------GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 999999754 358899999999999999999999 8999999999999999999999999998864321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.....++..|+|||.+.+..++.++||||||+++|||+||..||.....
T Consensus 150 ----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--- 198 (260)
T cd05611 150 ----------------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--- 198 (260)
T ss_pred ----------------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---
Confidence 1112356779999999888899999999999999999999999943211
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
............... +... ......+.+++.+||..||++||++.++.+.|
T Consensus 199 --~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 199 --DAVFDNILSRRINWP----EEVK-----EFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred --HHHHHHHHhcccCCC----Cccc-----ccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 111111111111100 0010 01223688999999999999999886665544
No 307
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.9e-34 Score=296.27 Aligned_cols=249 Identities=25% Similarity=0.340 Sum_probs=194.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|+||+++++
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGT 85 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCc
Confidence 47999999999999975 589999999876544 256789999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..|+.|++.||+|||+ .+|+|+||+|+||++++++.+||+|||++..........
T Consensus 86 L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 86 LEELLEHG------RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred HHHHHhhc------CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999754 347889999999999999999999 899999999999999999999999999987654321100
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC---CCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK---PSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
........++..|+|||++.+.. ++.++||||||+++|||++|+.||......
T Consensus 157 ------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~ 212 (264)
T cd06626 157 ------------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212 (264)
T ss_pred ------------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch
Confidence 00011234567899999998766 899999999999999999999999432211
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...... .... ..+...... .....+.+++.+||+.+|++|||+.|++.
T Consensus 213 ----~~~~~~-~~~~------~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 213 ----FQIMFH-VGAG------HKPPIPDSL---QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ----HHHHHH-HhcC------CCCCCCccc---ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111111 0111 011111111 11335779999999999999999999864
No 308
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.8e-35 Score=298.79 Aligned_cols=244 Identities=22% Similarity=0.332 Sum_probs=193.4
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|..+. |..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGD 85 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCc
Confidence 479999999999999864 8899999986542 2334578899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++..... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++ .+||+|||.+.......
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-- 156 (257)
T cd08225 86 LMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-- 156 (257)
T ss_pred HHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc--
Confidence 9999976432 357899999999999999999999 8999999999999999885 46999999887543211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 157 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~----- 205 (257)
T cd08225 157 --------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN----- 205 (257)
T ss_pred --------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----
Confidence 0111234677899999998888999999999999999999999998422
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+++....... ..+ ..+. ....+.+++.+||..+|++|||+.|+++
T Consensus 206 ~~~~~~~~~~~~~------~~~-~~~~-----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 206 NLHQLVLKICQGY------FAP-ISPN-----FSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred cHHHHHHHHhccc------CCC-CCCC-----CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1222222222111 111 1111 1235889999999999999999999975
No 309
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.2e-34 Score=297.53 Aligned_cols=246 Identities=22% Similarity=0.340 Sum_probs=192.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~~~ 483 (714)
+.||.|+||.||++... +++.||+|.+.... ....+.+..|++++++++||||+++++++.. ....+++|||+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~ 85 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG 85 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence 47999999999999864 57899999987542 3334678899999999999999999998864 3457899999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-----EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH-----~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
++|.+++...... ...+++..++.++.|++.||+||| + .+++|+||||+||++++++.+||+|||+++..
T Consensus 86 ~~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~---~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 86 GDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPG---NTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred CCHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhcCcccc---CcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999998653211 146899999999999999999999 6 79999999999999999999999999998865
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 161 ~~~~----------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 161 GHDS----------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred cCCc----------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 3211 001123457789999999988899999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. .. ...+.. .... . +.+.. .....+.+++.+||+.+|++|||+.+|++
T Consensus 213 ~~--~~---~~~~~~-~~~~-~-----~~~~~-----~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 213 RN--QL---QLASKI-KEGK-F-----RRIPY-----RYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred cC--HH---HHHHHH-hcCC-C-----CCCcc-----ccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 22 11 111111 1111 0 11111 12346889999999999999999999986
No 310
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.1e-35 Score=286.67 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=163.4
Q ss_pred ccccccCceEEEEEEECC-----CcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED-----GHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~ 480 (714)
..||+|+||.||+|..++ .+.+|+|+++.... .-.....+|+.+++.++||||+.+..++.+ +...++++||
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdY 109 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDY 109 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehh
Confidence 469999999999997543 23799999986522 122467899999999999999999999887 6678999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC----CCeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN----MEPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 556 (714)
.+. ||..+++-.+.... +.++...++.|+.||+.|+.|||+ +-|+||||||+|||+..+ |.+||+|||+|+
T Consensus 110 AEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR 184 (438)
T KOG0666|consen 110 AEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADLGLAR 184 (438)
T ss_pred hhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecccHHH
Confidence 987 99999876543322 468889999999999999999999 899999999999999877 899999999999
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.+...-.. .......+-|.+|+|||.+.|.+ ||.+.||||.|||+.||+|-++.
T Consensus 185 ~~~~plkp-------------------------l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~Pl 239 (438)
T KOG0666|consen 185 LFNNPLKP-------------------------LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPL 239 (438)
T ss_pred Hhhccccc-------------------------cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcc
Confidence 88643211 11122333488999999999876 89999999999999999998877
Q ss_pred c
Q 005102 636 V 636 (714)
Q Consensus 636 ~ 636 (714)
|
T Consensus 240 F 240 (438)
T KOG0666|consen 240 F 240 (438)
T ss_pred c
Confidence 7
No 311
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.2e-34 Score=301.22 Aligned_cols=259 Identities=23% Similarity=0.300 Sum_probs=190.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|++|.||+|... +|..||+|++.... ......+.+|++++++++|||++++++++...+..++||||++ ++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~ 83 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LD 83 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cC
Confidence 47999999999999975 69999999987543 2223568899999999999999999999999999999999995 69
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++..+.+++.|+++||+|||+ ++++||||+|+||++++++.+||+|||+++......
T Consensus 84 l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 84 LKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred HHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 9999876532 358999999999999999999999 899999999999999999999999999987543210
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||..... ..
T Consensus 154 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~ 207 (283)
T cd07835 154 -------------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-ID 207 (283)
T ss_pred -------------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HH
Confidence 001112346779999988664 478999999999999999999999953321 11
Q ss_pred hhHHHHHHHHhhc-------CCcccccC--CCCC-CC--CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEK-------KPLADVLD--PYLA-PD--ADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~-------~~~~~~~d--~~~~-~~--~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+...++...... ..+.+... +... .. .........+.+++.+||+.||++|||++|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 208 QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111111000000 00000000 0000 00 000011236789999999999999999999874
No 312
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.8e-35 Score=304.62 Aligned_cols=257 Identities=22% Similarity=0.258 Sum_probs=189.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|..+ +++.+|+|.++.... .....+.+|++++++++||||+++++++... +..++||||++
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~- 89 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE- 89 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-
Confidence 47999999999999986 488999999975432 2234577899999999999999999999877 88999999997
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++.... ..+++..+++++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++......
T Consensus 90 ~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 160 (293)
T cd07843 90 HDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL- 160 (293)
T ss_pred cCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-
Confidence 59999887643 358999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......++..|+|||.+.+.. ++.++||||||+++|||++|+.||.....
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~- 212 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE- 212 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 0011223467799999987644 68999999999999999999999843221
Q ss_pred cchhHHHHHHHHhh---------------c-CCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEE---------------K-KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~---------------~-~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+...-+...... . ..........+............+.+++.+||+.||++|||+.|++.
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 213 -IDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred -HHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111101000000 0 00000000000000000001345789999999999999999999875
No 313
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.2e-34 Score=302.98 Aligned_cols=241 Identities=23% Similarity=0.398 Sum_probs=189.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+++.. ++..||+|++.... ....+.+.+|++++++++|||++++++++...+..++||||++ |
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g 109 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-G 109 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-C
Confidence 36999999999999975 58899999987532 2334578899999999999999999999999999999999996 5
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+.+.... ..+++.++..++.|++.||.|||+ ++|+||||+|+||+++.++.+||+|||++.....
T Consensus 110 ~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 110 SASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 8888775432 458999999999999999999999 8999999999999999999999999998764321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.....++..|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 178 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 229 (317)
T cd06635 178 ----------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 229 (317)
T ss_pred ----------------------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 11123577899999974 45689999999999999999999999853211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
............ +... .......+.+++.+||+.+|.+||++.++++.+
T Consensus 230 -----~~~~~~~~~~~~-------~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 230 -----MSALYHIAQNES-------PTLQ----SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -----HHHHHHHHhccC-------CCCC----CccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 111111111111 0000 111233578999999999999999999998754
No 314
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.1e-34 Score=298.42 Aligned_cols=241 Identities=21% Similarity=0.220 Sum_probs=183.8
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHH---HHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVE---AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+||+|+||.||++... +++.||+|.+.+... .....+..|.. .++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999875 488999999875421 11122344433 4445579999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++... ..+++..++.++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~- 150 (278)
T cd05606 81 GGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK- 150 (278)
T ss_pred CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc-
Confidence 99999988654 458999999999999999999999 89999999999999999999999999998643211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
......|+..|+|||.+.++ .++.++||||+||++|||++|+.||.....
T Consensus 151 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~ 201 (278)
T cd05606 151 -----------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 201 (278)
T ss_pred -----------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCc
Confidence 01122467889999999754 689999999999999999999999954322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
... ...... ... ..+..... ....+.+++.+|+..+|++|| ++.++++
T Consensus 202 ~~~--~~~~~~-~~~-------~~~~~~~~-----~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 202 KDK--HEIDRM-TLT-------MAVELPDS-----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred cch--HHHHHH-hhc-------cCCCCCCc-----CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 111 111110 000 11111111 123688999999999999999 9988875
No 315
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.4e-35 Score=298.70 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=194.8
Q ss_pred ccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||.||+++..+ |+.+|+|.+..... ...+.+.+|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999875 89999999876533 3456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+.+++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++..........
T Consensus 81 ~~~l~~~------~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~- 150 (265)
T cd05579 81 ASLLENV------GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQIN- 150 (265)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccc-
Confidence 9999754 358999999999999999999999 899999999999999999999999999987543211000
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.. ..........++..|+|||.......+.++||||||+++|||++|+.||.... .
T Consensus 151 -----~~--------------~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~ 206 (265)
T cd05579 151 -----LN--------------DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----P 206 (265)
T ss_pred -----cc--------------cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----H
Confidence 00 00011122345678999999988889999999999999999999999994322 1
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.............. .... .....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 207 ~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 207 EEIFQNILNGKIEW--------PEDV---EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHHHHhcCCcCC--------Cccc---cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 12222211111100 0000 01346789999999999999999966666654
No 316
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.1e-34 Score=296.52 Aligned_cols=234 Identities=20% Similarity=0.258 Sum_probs=181.6
Q ss_pred ccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 411 LGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
||+|+||.||++..+ ++..+|+|.+........ |+.....+ +||||+++++++...+..++||||+++|+|.+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD 98 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence 699999999999975 578899999875422211 22222222 79999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhccCCCCCc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~~~~ 567 (714)
++... ..+++.++..++.|+++||.|||+ .+++||||||+||+++.++ .++|+|||+++.....
T Consensus 99 ~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------ 163 (267)
T PHA03390 99 LLKKE------GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP------ 163 (267)
T ss_pred HHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC------
Confidence 99765 358999999999999999999999 8999999999999999998 9999999988754211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
....++..|+|||++.+..++.++||||||+++|||++|+.||........+..
T Consensus 164 --------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 217 (267)
T PHA03390 164 --------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE 217 (267)
T ss_pred --------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence 112357789999999988899999999999999999999999964333332223
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-MRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~ 704 (714)
.+.... .... ... ......+.+++.+||+.+|.+||+ ++|+++
T Consensus 218 ~~~~~~-~~~~--------~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 218 SLLKRQ-QKKL--------PFI-----KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHhh-cccC--------Ccc-----cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 332221 1100 000 112336889999999999999996 588763
No 317
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.2e-34 Score=302.91 Aligned_cols=261 Identities=23% Similarity=0.280 Sum_probs=190.2
Q ss_pred ccccc--CceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKS--GIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+| +||+||++++. +|+.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 89999999975 69999999987542 233467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++||+.+.........
T Consensus 85 ~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 85 SANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred CHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99999876432 348899999999999999999999 89999999999999999999999999866433211100
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC--CCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV--KPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
... .........++..|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 158 ~~~---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~ 216 (328)
T cd08226 158 AKV---------------------VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT 216 (328)
T ss_pred ccc---------------------cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH
Confidence 000 00001112235569999999764 4789999999999999999999999533211
Q ss_pred cchhHHHHHHHHhhcCC-------------------------cc----------cccCCCCCCCCCcHHHHHHHHHHHhH
Q 005102 643 EMDLVNWMQLCIEEKKP-------------------------LA----------DVLDPYLAPDADKEEEIIAVLKIAMA 687 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~-------------------------~~----------~~~d~~~~~~~~~~~~~~~l~~li~~ 687 (714)
.. .... ...... .. ...+.... ..........+.+++.+
T Consensus 217 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~ 290 (328)
T cd08226 217 QM-LLQK----LKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR-TPSSKTFSPAFQNLVEL 290 (328)
T ss_pred HH-HHHH----hcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccccccccc-chhhhhhhHHHHHHHHH
Confidence 11 1110 000000 00 00000000 01112345578999999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 005102 688 CVHSSPEKRPTMRHISD 704 (714)
Q Consensus 688 Cl~~dP~~RPt~~evl~ 704 (714)
||+.||++|||++|+++
T Consensus 291 ~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 291 CLQQDPEKRPSASSLLS 307 (328)
T ss_pred HccCCcccCCCHHHHhh
Confidence 99999999999999974
No 318
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=280.10 Aligned_cols=254 Identities=23% Similarity=0.360 Sum_probs=195.5
Q ss_pred cCHHHHHHhccccccccCceEEEEEEECC-CcEEEEEEeCCC-CchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCce
Q 005102 398 FDLDELLKASAFVLGKSGIGIVYKVVLED-GHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEK 474 (714)
Q Consensus 398 ~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~ 474 (714)
-++.|++.. ..||.|+.|.|++++++. |+.+|||.++.. .....+++...++++.+-+ .|+||+.+|||..+...
T Consensus 89 ~dindl~~l--~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLENL--GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhhH--HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 355565543 259999999999999765 899999999875 4445677888888887775 89999999999999999
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
++.||.|.. -+..++.... +++++.-+-++...+.+||.||.+- ++|+|||+||+|||+|+.|++|++|||+
T Consensus 167 ~IcMelMs~-C~ekLlkrik-----~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 167 FICMELMST-CAEKLLKRIK-----GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred HHHHHHHHH-HHHHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccc
Confidence 999999954 5566665443 5688888889999999999999984 6899999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---CCCCchhhhHHHHHHHHHHHh
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---VKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DVwS~Gvvl~ellt 631 (714)
+-.+-+. ...+...|.+.|||||-+.- .+|+.++|||||||+++||.|
T Consensus 239 sGrlvdS-----------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 239 SGRLVDS-----------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred cceeecc-----------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 8765432 12233457888999999853 468999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|+.||.....+ . +.+.....+.. |.+.+... -...+.+++..||.+|+.+||...++++
T Consensus 290 g~yPy~~c~td---F-e~ltkvln~eP-------P~L~~~~g---FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 290 GQYPYKGCKTD---F-EVLTKVLNEEP-------PLLPGHMG---FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ccCCCCCCCcc---H-HHHHHHHhcCC-------CCCCcccC---cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 99999543222 1 22223333221 22222111 1235889999999999999999988765
No 319
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.7e-35 Score=298.71 Aligned_cols=242 Identities=22% Similarity=0.263 Sum_probs=192.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGG 85 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCC
Confidence 47999999999999986 48999999997542 234578999999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|+++||.|||+ .+++|+||||+||++++++.++|+|||++.......
T Consensus 86 ~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 86 DLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 999998755 358899999999999999999999 899999999999999999999999999887543210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||......
T Consensus 155 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-- 205 (258)
T cd05578 155 ---------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-- 205 (258)
T ss_pred ---------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--
Confidence 111223567799999998888999999999999999999999999543321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH--HHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM--RHIS 703 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~--~evl 703 (714)
...++....... . +.... .....+.+++.+||+.||.+||++ +|++
T Consensus 206 -~~~~~~~~~~~~---~----~~~~~-----~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 206 -IRDQIRAKQETA---D----VLYPA-----TWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -HHHHHHHHhccc---c----ccCcc-----cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111111111110 0 11111 122468899999999999999999 5544
No 320
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.7e-34 Score=293.94 Aligned_cols=248 Identities=27% Similarity=0.421 Sum_probs=198.2
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|++|.||+|...+ ++.||||++..... ...+.+.+|++.+.+++|+||+++++++...+..++||||+++++|
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSL 86 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcH
Confidence 479999999999999875 89999999987654 4457899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+.+++.|+++||+|||+. .+++||||+|+||+++.++.++|+|||++........
T Consensus 87 ~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~--- 155 (264)
T cd06623 87 ADLLKKV------GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD--- 155 (264)
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCC---
Confidence 9999755 4589999999999999999999983 4899999999999999999999999999876532110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
......++..|+|||.+.+..++.++||||||+++|||+||+.||..... ...
T Consensus 156 -------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~ 208 (264)
T cd06623 156 -------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSF 208 (264)
T ss_pred -------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCH
Confidence 01122356779999999988899999999999999999999999954332 111
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
.+......... .+..... .....+.+++.+||..+|++|||+.++++.
T Consensus 209 ~~~~~~~~~~~-------~~~~~~~----~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 209 FELMQAICDGP-------PPSLPAE----EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHhcCC-------CCCCCcc----cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 12121111111 1111111 023468899999999999999999999863
No 321
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.1e-34 Score=302.80 Aligned_cols=264 Identities=19% Similarity=0.243 Sum_probs=187.7
Q ss_pred ccccCceEEEEEEECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++|+||+++++++...+..+++|||+++|+|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 34445555555544 5899999998764 33445689999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+...........
T Consensus 89 ~l~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~-- 159 (314)
T cd08216 89 LLKTHFP----EGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR-- 159 (314)
T ss_pred HHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccc--
Confidence 9975432 348889999999999999999999 8999999999999999999999999998875432111000
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
..........++..|+|||++.. ..++.++|||||||++|||++|+.||........ .
T Consensus 160 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~ 219 (314)
T cd08216 160 -------------------VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-L 219 (314)
T ss_pred -------------------ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence 00111123345678999999865 3578999999999999999999999954322111 1
Q ss_pred HHHHHHHHh----------hcCCccc----ccCCCCC---CCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIE----------EKKPLAD----VLDPYLA---PDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~----------~~~~~~~----~~d~~~~---~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+....... ....... ..++... ..........++.+++.+||..||++|||++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 220 LEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 111000000 0000000 0000000 00011122346889999999999999999999875
No 322
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.7e-34 Score=299.10 Aligned_cols=258 Identities=16% Similarity=0.171 Sum_probs=178.6
Q ss_pred ccccccCceEEEEEEECCC----cEEEEEEeCCCCchhH-----------HHHHHHHHHHhccCCCCccceEEEEEeCC-
Q 005102 409 FVLGKSGIGIVYKVVLEDG----HTLAVRRLGEGGSQRF-----------KEFQTEVEAIGKIRHSNIVTLRAYYWSVD- 472 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g----~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l~~~~~~~~- 472 (714)
+.||+|+||.||+|...++ ..+|+|+......... .....+...+..++|+||+++++++....
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~ 97 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRC 97 (294)
T ss_pred eEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecC
Confidence 4799999999999997653 4556665432221110 11223445566778999999999776543
Q ss_pred ---ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEE
Q 005102 473 ---EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549 (714)
Q Consensus 473 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 549 (714)
..++++|++.. ++.+.+... ...++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 98 ~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 98 RMYYRFILLEKLVE-NTKEIFKRI------KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred CceEEEEEEehhcc-CHHHHHHhh------ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcEEE
Confidence 34678887743 666666533 235788899999999999999999 89999999999999999999999
Q ss_pred cccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHH
Q 005102 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 550 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~el 629 (714)
+|||+|+........... .........||+.|+|||+..+..++.++|||||||++|||
T Consensus 168 ~DFGla~~~~~~~~~~~~---------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEY---------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred EEcCCceeeccCCccccc---------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999866432111000 00112233579999999999999999999999999999999
Q ss_pred HhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 630 ITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 630 ltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
++|+.||........ +.......... .+..+.... ......+.+++..||..+|++||++.++.+.|+
T Consensus 227 ~~g~~P~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 227 AGIKLPWKGFGHNGN-LIHAAKCDFIK-----RLHEGKIKI----KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhCCCCCCccccchH-HHHHhHHHHHH-----Hhhhhhhcc----CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 999999954422221 11111100000 000010000 011246889999999999999999999998763
No 323
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=284.68 Aligned_cols=252 Identities=24% Similarity=0.316 Sum_probs=197.8
Q ss_pred HHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEe----CCcee
Q 005102 402 ELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS----VDEKL 475 (714)
Q Consensus 402 ~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~~~ 475 (714)
|-+..+.++||-|-.|.|-.+..+ +|+.+|+|++... ....+|++.--.. .|||||.++++|.. ...+.
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 333445679999999999999875 5899999998754 3456788876666 69999999999874 34567
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEccc
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDF 552 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DF 552 (714)
+|||+|+||.|++.+.++.. ..+++.++-.|++||+.|+.|||+ ..|.||||||+|+|... |..+||+||
T Consensus 136 iVmE~meGGeLfsriq~~g~----~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGD----QAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeeecccchHHHHHHHHccc----ccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEeccc
Confidence 99999999999999988754 569999999999999999999999 89999999999999964 567899999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhC
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG 632 (714)
|+|+.-... ....+...|++|.|||++...+|+...|+||+||++|-|+.|
T Consensus 209 GFAK~t~~~-----------------------------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 209 GFAKETQEP-----------------------------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred ccccccCCC-----------------------------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 999854321 122344569999999999999999999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+||+.... ..+..-++..+..+. +-.+.+......+...++|+..|+.+|.+|.|++++++
T Consensus 260 yPPFYS~hg--~aispgMk~rI~~gq--------y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 260 YPPFYSNHG--LAISPGMKRRIRTGQ--------YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CCcccccCC--ccCChhHHhHhhccC--------ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 999964433 222222322222221 11223333455667889999999999999999999875
No 324
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.4e-34 Score=297.47 Aligned_cols=255 Identities=18% Similarity=0.246 Sum_probs=187.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccC-CCCccceEEEEEeC--CceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSV--DEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lV~e~~~~ 483 (714)
..||+|+||.||+|... +++.||+|+++... ........+|+.++.++. |+||+++++++.+. +..++||||++
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~- 83 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD- 83 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-
Confidence 46999999999999975 58999999987642 222234567999999995 99999999999987 88999999996
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+.+.... ..+++.++..++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++......
T Consensus 84 ~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 84 MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 58888886543 358999999999999999999999 89999999999999999 999999999987653211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
......++..|+|||.+.. ..++.++|||||||++|||++|+.||... +
T Consensus 154 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~--~ 203 (282)
T cd07831 154 ----------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT--N 203 (282)
T ss_pred ----------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC--C
Confidence 0111235778999997654 55789999999999999999999999432 2
Q ss_pred cchhHHHHHHHHhhcCC-------cccccCCCCCCCC------CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKP-------LADVLDPYLAPDA------DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~-------~~~~~d~~~~~~~------~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+...+.......... .....+....... ........+.+++.+||+.+|++|||++++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 204 ELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 22222222211110000 0000000000000 00123457899999999999999999999875
No 325
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=329.26 Aligned_cols=271 Identities=26% Similarity=0.360 Sum_probs=208.2
Q ss_pred CccccCHHHHHHhccccccccCceEEEEEEECC--------CcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccc
Q 005102 394 TQVAFDLDELLKASAFVLGKSGIGIVYKVVLED--------GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVT 463 (714)
Q Consensus 394 ~~~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~ 463 (714)
..+.+..+.+. ..+.+|+|.||.|++|.... ...||||.++... ....+.+..|+++|+.+ +|+||+.
T Consensus 289 ~~~e~~~~~l~--~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~ 366 (609)
T KOG0200|consen 289 PKWEIPRENLK--LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVN 366 (609)
T ss_pred Cceeechhhcc--ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhh
Confidence 34556666552 23489999999999998531 4579999998753 34567899999999999 6999999
Q ss_pred eEEEEEeCCceeEEEeccCCCCHhhhhhCCC---CCC-----CcC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 005102 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKP---GMV-----SFT--PVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGD 533 (714)
Q Consensus 464 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~-----~~~--~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrD 533 (714)
++|+|...+..++|+||++.|+|.++++..+ ... ... .++..+.+.++.|||.|++||++ .++||||
T Consensus 367 llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRD 443 (609)
T KOG0200|consen 367 LLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRD 443 (609)
T ss_pred heeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchh
Confidence 9999999999999999999999999998776 000 001 38899999999999999999999 8999999
Q ss_pred CCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC
Q 005102 534 LKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP 613 (714)
Q Consensus 534 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 613 (714)
|.++|||+.++..+||+|||+|+.......... ......-...|||||.+....|
T Consensus 444 LAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~-------------------------~~~~~~LP~kWmApEsl~~~~f 498 (609)
T KOG0200|consen 444 LAARNVLITKNKVIKIADFGLARDHYNKDYYRT-------------------------KSSAGTLPVKWMAPESLFDRVF 498 (609)
T ss_pred hhhhhEEecCCCEEEEccccceeccCCCCceEe-------------------------cCCCCccceeecCHHHhccCcc
Confidence 999999999999999999999986543221100 0000001234999999999999
Q ss_pred CchhhhHHHHHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCC
Q 005102 614 SQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSS 692 (714)
Q Consensus 614 s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~d 692 (714)
+.|+|||||||+||||+| |..||..... ..++.+ .++.+..+ ..| ..+..+++++|+.||+.+
T Consensus 499 t~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~l~~----~l~~G~r~---~~P--------~~c~~eiY~iM~~CW~~~ 562 (609)
T KOG0200|consen 499 TSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEELLE----FLKEGNRM---EQP--------EHCSDEIYDLMKSCWNAD 562 (609)
T ss_pred cccchhhHHHHHHHHHhhCCCCCCCCCCc-HHHHHH----HHhcCCCC---CCC--------CCCCHHHHHHHHHHhCCC
Confidence 999999999999999999 8889854211 122222 23333211 111 123447899999999999
Q ss_pred CCCCCCHHHHHHHHhhhh
Q 005102 693 PEKRPTMRHISDALDRLI 710 (714)
Q Consensus 693 P~~RPt~~evl~~L~~i~ 710 (714)
|++||++.++++.++...
T Consensus 563 p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 563 PEDRPTFSECVEFFEKHL 580 (609)
T ss_pred cccCCCHHHHHHHHHHHH
Confidence 999999999999999853
No 326
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.8e-34 Score=297.50 Aligned_cols=258 Identities=23% Similarity=0.326 Sum_probs=191.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|++|.||+|+.. +|..||||++..... .....+.+|++++++++||||+++++++...+..++||||+++ +|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l 84 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DL 84 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cH
Confidence 47999999999999986 589999999876532 2345678899999999999999999999999999999999985 89
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++...... ..+++..+.+++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 85 ~~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---- 154 (284)
T cd07836 85 KKYMDTHGVR---GALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---- 154 (284)
T ss_pred HHHHHhcCCC---CCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc----
Confidence 8888654321 458999999999999999999999 899999999999999999999999999987543210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ..
T Consensus 155 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~ 209 (284)
T cd07836 155 ------------------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQ 209 (284)
T ss_pred ------------------------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HH
Confidence 011122346789999998654 4689999999999999999999998533211 11
Q ss_pred hHHHHHHHHhhc--------CCcccccCCCCCCCCC------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEK--------KPLADVLDPYLAPDAD------KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~--------~~~~~~~d~~~~~~~~------~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...... ..... ...... ......... .......+.+++.+||+.||++||++.|+++
T Consensus 210 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 210 LLKIFR-IMGTPTESTWPGISQLPEY-KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHH-HhCCCChhhHHHHhcCchh-cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111110 00000 000000 000000000 0112345789999999999999999999874
No 327
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.5e-34 Score=307.43 Aligned_cols=253 Identities=22% Similarity=0.323 Sum_probs=187.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
..||+|+||.||+|... +++.||+|.+... .....+.+.+|+.++++++||||+++++++... ...++|||
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 101 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVME 101 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEe
Confidence 47999999999999975 5899999998653 233345678899999999999999999998643 35699999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+. ++|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~-~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 102 LMD-ANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred ccC-CCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 995 588887752 27888999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 170 ~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 170 TSF-----------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCC-----------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 210 011223577899999999999999999999999999999999999432
Q ss_pred CCCcchhHHHH------------H-------HHHhhcC-----CcccccCCCCCCCCC---cHHHHHHHHHHHhHccCCC
Q 005102 640 GSSEMDLVNWM------------Q-------LCIEEKK-----PLADVLDPYLAPDAD---KEEEIIAVLKIAMACVHSS 692 (714)
Q Consensus 640 ~~~~~~l~~~~------------~-------~~~~~~~-----~~~~~~d~~~~~~~~---~~~~~~~l~~li~~Cl~~d 692 (714)
.. .+....+ . ....... .+.+.......+... .......+.+++.+||+.|
T Consensus 221 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 298 (353)
T cd07850 221 DH--IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID 298 (353)
T ss_pred CH--HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCC
Confidence 11 1100000 0 0000000 000111000000000 1123446789999999999
Q ss_pred CCCCCCHHHHHH
Q 005102 693 PEKRPTMRHISD 704 (714)
Q Consensus 693 P~~RPt~~evl~ 704 (714)
|++|||+.|+++
T Consensus 299 P~~R~t~~eiL~ 310 (353)
T cd07850 299 PEKRISVDDALQ 310 (353)
T ss_pred hhhCcCHHHHhc
Confidence 999999999985
No 328
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-35 Score=308.42 Aligned_cols=239 Identities=22% Similarity=0.287 Sum_probs=196.1
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.||+|.|+.|..+++. ++..||||.+.+. +......+.+|+++|+.++|||||+++.+.......|+||||+.+|.+
T Consensus 63 tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~ 142 (596)
T KOG0586|consen 63 TIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGEL 142 (596)
T ss_pred eeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchh
Confidence 7999999999999975 4899999999875 333445589999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
++++.... .+....+..++.|+.+|++|+|+ +.|||||||++|||++.++++||+|||++.++...
T Consensus 143 ~~yl~~~g------r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~----- 208 (596)
T KOG0586|consen 143 FDYLVKHG------RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG----- 208 (596)
T ss_pred HHHHHhcc------cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeeccc-----
Confidence 99998773 45668889999999999999999 99999999999999999999999999999887532
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
....+..|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..||+.. .
T Consensus 209 ------------------------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~-----~ 259 (596)
T KOG0586|consen 209 ------------------------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ-----N 259 (596)
T ss_pred ------------------------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc-----c
Confidence 23445678899999999998876 78999999999999999999999422 1
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+.-.+++..+..+. +. ....+-+++++++..+|.+|++++++.+
T Consensus 260 lk~Lr~rvl~gk~rIp----------~~---ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 260 LKELRPRVLRGKYRIP----------FY---MSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred cccccchheeeeeccc----------ce---eechhHHHHHHhhccCccccCCHHHhhh
Confidence 2111112222211111 11 1114568999999999999999999865
No 329
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.3e-34 Score=306.64 Aligned_cols=270 Identities=21% Similarity=0.261 Sum_probs=192.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchh--------------HHHHHHHHHHHhccCCCCccceEEEEEeCCc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQR--------------FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE 473 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (714)
..||+|+||.||+|... +++.||||++....... ...+.+|++++++++||||+++++++...+.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 47999999999999975 58999999986542221 1247789999999999999999999999999
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
.++||||+. |+|.+++... ..+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 95 ~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVDRK------IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEEEEeccc-cCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECCcc
Confidence 999999996 6999998654 458899999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhC
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG 632 (714)
+++................. ..........++..|+|||.+.+. .++.++|||||||++|||+||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETM--------------QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred ceeecccccccccccccccc--------------cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 99865422111100000000 001111223457789999998764 469999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCC--cccc-----cCCCCCCCCC-----cHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKP--LADV-----LDPYLAPDAD-----KEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~-----~d~~~~~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
+.||..... .+....+......... ..+. ..+....... .......+.+++.+||+.+|++|||++
T Consensus 231 ~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 308 (335)
T PTZ00024 231 KPLFPGENE--IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAK 308 (335)
T ss_pred CCCCCCCCH--HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHH
Confidence 999953321 1111111111111000 0000 0000000000 001234678999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
|++.
T Consensus 309 ~~l~ 312 (335)
T PTZ00024 309 EALK 312 (335)
T ss_pred HHhc
Confidence 9975
No 330
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.6e-34 Score=292.51 Aligned_cols=244 Identities=25% Similarity=0.392 Sum_probs=196.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|++|.||++... ++..+++|++........+.+.+|++.+++++|+||+++++++...+..++++||+++++|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 85 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLK 85 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHH
Confidence 47999999999999986 58899999998766555678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.++|+|||.+........
T Consensus 86 ~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---- 153 (253)
T cd05122 86 DLLKSTN-----QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---- 153 (253)
T ss_pred HHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc----
Confidence 9987653 358999999999999999999999 8999999999999999999999999999876532110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... .
T Consensus 154 -------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~ 203 (253)
T cd05122 154 -------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----M 203 (253)
T ss_pred -------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----H
Confidence 1223356779999999888899999999999999999999999843211 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
......... .......+ . .....+.+++.+||+.||++|||+.|+++
T Consensus 204 ~~~~~~~~~--~~~~~~~~-----~---~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 204 KALFKIATN--GPPGLRNP-----E---KWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHhc--CCCCcCcc-----c---ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111 11111111 0 01236889999999999999999999875
No 331
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.1e-34 Score=303.00 Aligned_cols=201 Identities=24% Similarity=0.356 Sum_probs=163.3
Q ss_pred ccccccCceEEEEEEECC---CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED---GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 480 (714)
..||+|+||.||+|.... ++.||+|.+.... ....+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 85 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY 85 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence 469999999999999754 7899999998732 33346778899999999999999999999987 789999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC----CCCeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH----NMEPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFGla~ 556 (714)
+++ +|.+++....... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 86 ~~~-~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 86 AEH-DLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred CCc-CHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 975 7777765332211 1358899999999999999999999 89999999999999999 8999999999998
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
........ ........++..|+|||.+.+. .++.++|||||||++|||++|+.|
T Consensus 161 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 161 LFNAPLKP-------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred ccCCCccc-------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 65422110 0111223457789999988764 579999999999999999999999
Q ss_pred cccC
Q 005102 636 VVQV 639 (714)
Q Consensus 636 ~~~~ 639 (714)
|...
T Consensus 216 ~~~~ 219 (316)
T cd07842 216 FKGR 219 (316)
T ss_pred CcCC
Confidence 9543
No 332
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.4e-34 Score=299.54 Aligned_cols=256 Identities=23% Similarity=0.315 Sum_probs=187.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|++|.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||++ ++
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 86 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LD 86 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-cc
Confidence 47999999999999976 589999999865422 233578899999999999999999999999999999999996 58
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++..... ..+++..+..++.||+.||+|||+ ++++||||||+||++++ ++.+||+|||+++......
T Consensus 87 l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 87 LKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred HHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 8888765432 236788889999999999999999 89999999999999985 5679999999987543210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.......+++.|+|||++.+. .++.++|||||||++|||+||+.||......
T Consensus 158 --------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~- 210 (294)
T PLN00009 158 --------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI- 210 (294)
T ss_pred --------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 011122356789999998664 5789999999999999999999999532211
Q ss_pred chhHHHHHHHHhhcCCcccccC------------CCCCCCC---CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLD------------PYLAPDA---DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d------------~~~~~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ...+.......+..+..+ +...... ........+.+++.+|++.+|++||++.++++
T Consensus 211 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 211 D---ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred H---HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111110000000000000 0000000 00011235789999999999999999999875
No 333
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.8e-34 Score=297.72 Aligned_cols=258 Identities=22% Similarity=0.299 Sum_probs=191.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|...+ ++.+|+|++.... ....+.+.+|++++++++|+|++++++++... +..++||||+++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH 84 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc
Confidence 469999999999999864 8999999998753 33345788999999999999999999999887 789999999975
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++........
T Consensus 85 -~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 85 -DLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred -cHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 8998886542 358999999999999999999999 8999999999999999999999999999876532210
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......++..|+|||.+.+ ..++.++||||||+++|||+||+.||.....
T Consensus 156 ---------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~- 207 (287)
T cd07840 156 ---------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE- 207 (287)
T ss_pred ---------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 01112234677999998765 4578999999999999999999999843221
Q ss_pred cchhHHHHHHHHhhc----C-Ccccc-----cCCCCCCCCC----cHH-HHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEK----K-PLADV-----LDPYLAPDAD----KEE-EIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~----~-~~~~~-----~d~~~~~~~~----~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
......+....... + ..... ..+....... ... ....+.+++.+||..+|++||+++++++
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 208 -LEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred -HHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11111111110000 0 00000 0000000000 000 1456889999999999999999999875
No 334
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-36 Score=283.90 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=197.9
Q ss_pred cccCHHHHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCC
Q 005102 396 VAFDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVD 472 (714)
Q Consensus 396 ~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 472 (714)
..|+-++|+.. ..||.|.||+|+|-.++ .|+..|||+++.... ...+++..|.++..+- +.||||+++|.+...+
T Consensus 59 ~~F~~~~Lqdl--g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG 136 (361)
T KOG1006|consen 59 HTFTSDNLQDL--GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG 136 (361)
T ss_pred cccccchHHHH--HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence 34555555543 25999999999998875 499999999987643 5667899999876665 6899999999999999
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
..++.||.|.- +|..+...- .......+++.-.-+|...+.+||.||.+. ..|||||+||+|||+|..|.+||+||
T Consensus 137 dcWiCMELMd~-SlDklYk~v-y~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDF 212 (361)
T KOG1006|consen 137 DCWICMELMDI-SLDKLYKRV-YSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDF 212 (361)
T ss_pred ceeeeHHHHhh-hHHHHHHHH-HHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecc
Confidence 99999999954 665543211 000114588888889999999999999875 57999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHH
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMI 630 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~ell 630 (714)
|.+-.+..+ ...+...|...|||||-+.. ..|+.++||||+|++|||+.
T Consensus 213 GIcGqLv~S-----------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvA 263 (361)
T KOG1006|consen 213 GICGQLVDS-----------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVA 263 (361)
T ss_pred cchHhHHHH-----------------------------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeee
Confidence 998766432 22334456788999999953 34899999999999999999
Q ss_pred hCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 631 TGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 631 tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
||+.||... .++.+.+...+....+ .+..+....+....+..++..|+.+|-++||...++.+
T Consensus 264 tG~fPyr~w----~svfeql~~Vv~gdpp-------~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 264 TGNFPYRKW----DSVFEQLCQVVIGDPP-------ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCCCCcchH----HHHHHHHHHHHcCCCC-------eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 999999433 2233444444333321 11112221223456889999999999999999988764
No 335
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.1e-34 Score=301.17 Aligned_cols=261 Identities=20% Similarity=0.265 Sum_probs=186.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc--------eeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE--------KLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--------~~lV 477 (714)
..||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++...+. .++|
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 97 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLV 97 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEE
Confidence 47999999999999976 58999999886542 2223456789999999999999999999876543 4999
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+. ++|.+.+.... ..+++.++..++.|++.||+|||+ ++++|+||||+||++++++.+||+|||++..
T Consensus 98 ~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 98 FEFCE-HDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred EcCCC-cCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 99996 48888876542 358999999999999999999999 8999999999999999999999999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
........ ........++..|+|||.+.+.. ++.++||||||+++|||+||+.||
T Consensus 169 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 169 FSLSKNSK------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred ccCCcccC------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54321100 00112234567899999886644 788999999999999999999998
Q ss_pred ccCCCCcchhHHHHHHHHhhcC-C-cc-----cccCC-CCCCCC--------CcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKK-P-LA-----DVLDP-YLAPDA--------DKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~-~-~~-----~~~d~-~~~~~~--------~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
.... .......+........ . .. +..+. ...... ........+.+++.+||..||++|||++
T Consensus 225 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~ 302 (310)
T cd07865 225 QGNT--EQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDAD 302 (310)
T ss_pred CCCC--HHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHH
Confidence 4321 1111111111110000 0 00 00000 000000 0000123567999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
|+++
T Consensus 303 e~l~ 306 (310)
T cd07865 303 TALN 306 (310)
T ss_pred HHhc
Confidence 9874
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.9e-34 Score=299.04 Aligned_cols=250 Identities=23% Similarity=0.255 Sum_probs=193.3
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCCC----chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
+.||+|+||.||+++.. ++..||||.+++.. ....+.+.+|++++.++ +||||+++++.+...+..++|||
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e 85 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILD 85 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEe
Confidence 47999999999999853 47889999987532 22335688999999999 59999999999998889999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++|+|.+++... ..+++..+..++.|+++||+|||+ .+++||||||+||++++++.++|+|||+++...
T Consensus 86 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 86 YVNGGELFTHLYQR------EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred cCCCCcHHHHHhhc------CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999998654 358899999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC--CCchhhhHHHHHHHHHHHhCCCccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK--PSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
.... .......|+..|+|||.+.+.. .+.++||||||+++|||++|+.||.
T Consensus 157 ~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 157 AEEE---------------------------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred cccc---------------------------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 2110 0011233577899999987665 7889999999999999999999994
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhh
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDR 708 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 708 (714)
.... .....++.+........ .... ....+.+++.+||+.||++|||+.++.+.|+-
T Consensus 210 ~~~~-~~~~~~~~~~~~~~~~~--------~~~~-----~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 210 VDGE-QNSQSEISRRILKSKPP--------FPKT-----MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cCcc-cchHHHHHHHHHccCCC--------CCcc-----cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 3221 11112222222221111 1111 12357789999999999999999988877764
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.8e-34 Score=300.62 Aligned_cols=257 Identities=24% Similarity=0.324 Sum_probs=187.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|... +|+.||+|+++.... .....+.+|++++++++|+||+++++++... +..++||||+.
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~- 91 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE- 91 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-
Confidence 47999999999999975 489999999875422 2223567899999999999999999998765 45799999996
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++.... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.......
T Consensus 92 ~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 163 (309)
T cd07845 92 QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK 163 (309)
T ss_pred CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCCccC
Confidence 48988886543 458999999999999999999999 8999999999999999999999999999876532110
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....
T Consensus 164 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~-- 213 (309)
T cd07845 164 ----------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS-- 213 (309)
T ss_pred ----------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC--
Confidence 0111223667999999865 457999999999999999999999995322
Q ss_pred cchhHHHHHHHHhhcC--Cccccc------CCCCCCCC--C----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKK--PLADVL------DPYLAPDA--D----KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~--~~~~~~------d~~~~~~~--~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+....+........ ...... ........ . .......+.+++.+||+.||++|||++|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 214 EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred HHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 2221111111110000 000000 00000000 0 0012345789999999999999999999875
No 338
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.9e-34 Score=301.65 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=187.7
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||+|+||.||+|.+.+ ++.||||.+..... .....+.+|+.++.+.. ||||+++++++......++||||+. +
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~ 98 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-T 98 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-c
Confidence 3589999999999999875 89999999976432 33456777888777775 9999999999999999999999985 4
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
++.+++.... ..+++..+.+++.|++.||+|||+. .+|+||||+|+||++++++.+||+|||++.......
T Consensus 99 ~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~-- 169 (296)
T cd06618 99 CLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK-- 169 (296)
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCC--
Confidence 7777765432 3589999999999999999999962 489999999999999999999999999987543211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC----CCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK----PSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
......++..|+|||.+.+.. ++.++||||||+++|||++|+.||....
T Consensus 170 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 222 (296)
T cd06618 170 ---------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK 222 (296)
T ss_pred ---------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence 011123467799999997654 7899999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
.. .+.......... +...... ....++.+++.+||..||++||++.+++..
T Consensus 223 ~~----~~~~~~~~~~~~-------~~~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 223 TE----FEVLTKILQEEP-------PSLPPNE---GFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hH----HHHHHHHhcCCC-------CCCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 111211111111 1111000 123368899999999999999999999754
No 339
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.7e-34 Score=298.57 Aligned_cols=258 Identities=21% Similarity=0.258 Sum_probs=187.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccC-CCCccceEEEEEeCCc-----eeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDE-----KLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~-----~~lV~e 479 (714)
+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++ ||||+++++++...+. .|+|||
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e 86 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFE 86 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEee
Confidence 47999999999999976 58999999886542 223357888999999995 6999999999987665 799999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARLA 558 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~ 558 (714)
|+++ +|.+++...... ....+++..+..++.||+.||+|||+ ++|+||||||+||+++. ++.+||+|||+++..
T Consensus 87 ~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~ 161 (295)
T cd07837 87 YLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161 (295)
T ss_pred ccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecccceec
Confidence 9985 898888654321 11458999999999999999999999 89999999999999998 889999999998754
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
..... ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 162 ~~~~~----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 213 (295)
T cd07837 162 SIPVK----------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFP 213 (295)
T ss_pred CCCcc----------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence 22100 0111234677999998865 457999999999999999999999994
Q ss_pred cCCCCcchhHHHHHHHHhh-cCCcccccC-----------CCCCCCC---CcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEE-KKPLADVLD-----------PYLAPDA---DKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~-~~~~~~~~d-----------~~~~~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
.... ..... ..... ..+..+... +...+.. ..+....++.+++.+||+.||++|||++|+
T Consensus 214 ~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ei 288 (295)
T cd07837 214 GDSE----LQQLL-HIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA 288 (295)
T ss_pred CCCH----HHHHH-HHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHH
Confidence 3211 11111 11110 000000000 0000000 001123468899999999999999999998
Q ss_pred HH
Q 005102 703 SD 704 (714)
Q Consensus 703 l~ 704 (714)
+.
T Consensus 289 l~ 290 (295)
T cd07837 289 LT 290 (295)
T ss_pred hc
Confidence 74
No 340
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8.7e-34 Score=289.33 Aligned_cols=242 Identities=25% Similarity=0.450 Sum_probs=195.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|++|.||++... +++.||+|.+..... ...+.+.+|++++++++|||++++++++...+..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGS 85 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCc
Confidence 47999999999999876 478999999987644 445689999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 86 L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (254)
T cd06627 86 LRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-- 154 (254)
T ss_pred HHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc--
Confidence 99998755 458999999999999999999999 8999999999999999999999999999986542211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......++..|+|||...+..++.++||||+|+++|+|++|+.||.... .
T Consensus 155 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~ 204 (254)
T cd06627 155 --------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----P 204 (254)
T ss_pred --------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----H
Confidence 0112235777999999988888999999999999999999999985332 1
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....... .... .+..... ....+.+++.+||..+|++|||+.+++.
T Consensus 205 ~~~~~~~-~~~~-------~~~~~~~-----~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 205 MAALFRI-VQDD-------HPPLPEG-----ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHH-hccC-------CCCCCCC-----CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1111111 1110 0111111 1236789999999999999999999874
No 341
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.4e-34 Score=296.79 Aligned_cols=246 Identities=23% Similarity=0.265 Sum_probs=189.0
Q ss_pred ccccccCceEEEEEEE----CCCcEEEEEEeCCCC----chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVL----EDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
..||+|+||.||+++. .+|..||+|++.... ....+.+.+|++++.++ +|+||+++++++......++|||
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILD 85 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEe
Confidence 4799999999999986 368999999987532 12335688999999999 59999999999998888999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++...
T Consensus 86 ~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 86 YINGGELFTHLSQR------ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred cCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999998754 357889999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC--CCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV--KPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
.... .......|+..|+|||.+.+. .++.++||||||+++|||++|+.||.
T Consensus 157 ~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 157 EDEV---------------------------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred cccc---------------------------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 2110 011123467789999998753 46889999999999999999999984
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
.... ......+.........+ .... ....+.+++.+||+.||++|| ++++++.
T Consensus 210 ~~~~-~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 210 VDGE-KNSQAEISRRILKSEPP--------YPQE-----MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred cCCc-cccHHHHHHHhhccCCC--------CCcc-----CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 3211 11122222222111111 1111 123578999999999999997 5666554
No 342
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5e-34 Score=300.25 Aligned_cols=240 Identities=22% Similarity=0.374 Sum_probs=187.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. ++..+|+|.+... .....+++.+|++++++++|+|++++++++...+..++||||+. |
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 99 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 99 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-C
Confidence 36999999999999975 4789999998643 22334578899999999999999999999999999999999996 6
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
++.+.+.... ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 100 ~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 100 SASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred CHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 8888775432 358899999999999999999999 89999999999999999999999999988653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
....++..|+|||.+. ...++.++|||||||++|||++|+.||.....
T Consensus 169 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 169 -----------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred -----------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 1123567899999974 35678899999999999999999999843211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
............ +... .......+.+++.+||+.+|++||++++++..
T Consensus 220 -----~~~~~~~~~~~~-------~~~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 220 -----MSALYHIAQNES-------PALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred -----HHHHHHHhhcCC-------CCcC----cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 111111111110 1111 11123457899999999999999999998764
No 343
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.8e-34 Score=306.01 Aligned_cols=259 Identities=21% Similarity=0.316 Sum_probs=187.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~ 481 (714)
+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++... ...++||||+
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 90 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELM 90 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhc
Confidence 47999999999999865 58999999987532 23345688999999999999999999987654 3579999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
.+ +|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~-~l~~~~~~-------~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 91 ET-DLYKLIKT-------QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred cc-CHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 64 88887753 348999999999999999999999 89999999999999999999999999998764321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
... ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~ 214 (336)
T cd07849 160 HDH-------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD 214 (336)
T ss_pred ccc-------------------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 100 001122356888999998754 468999999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcC--CcccccCCC-------C--CCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKK--PLADVLDPY-------L--APDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~--~~~~~~d~~-------~--~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
.......+........ ....+.+.. . ..... ......++.+++.+||+.||++|||+.|+++.
T Consensus 215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 215 --YLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred --HHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111110000 000000000 0 00000 00123468899999999999999999999875
No 344
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.6e-33 Score=297.05 Aligned_cols=239 Identities=21% Similarity=0.380 Sum_probs=187.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++|||++++++++.+.+..++||||+. |
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 105 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G 105 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-C
Confidence 46999999999999975 58899999987532 2334568899999999999999999999999999999999995 5
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
++.+++.... ..+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 106 ~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 106 SASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 8888776443 458999999999999999999999 8999999999999999999999999998753210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 174 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~ 225 (313)
T cd06633 174 ----------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 225 (313)
T ss_pred ----------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 11234577899999984 45688999999999999999999999843211
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+........ .....+ .....+.+++.+||+.+|.+||++.+++.
T Consensus 226 -----~~~~~~~~~~~~--~~~~~~---------~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 226 -----MSALYHIAQNDS--PTLQSN---------EWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred -----HHHHHHHHhcCC--CCCCcc---------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111111 111110 11235788999999999999999999885
No 345
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=336.29 Aligned_cols=248 Identities=26% Similarity=0.331 Sum_probs=195.1
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.+||.|.||.||-|... +|...|||-++.. .....+...+|+.++..++|||+|+++|+-...+..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 468999999999999854 5899999987654 3333466789999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+.+... +..++.....+..|++.|++|||+ .|||||||||+||+++.+|.+|++|||.|+.+.....
T Consensus 1320 sLa~ll~~g------ri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~- 1389 (1509)
T KOG4645|consen 1320 SLASLLEHG------RIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ- 1389 (1509)
T ss_pred cHHHHHHhc------chhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCchh-
Confidence 999998755 336677778899999999999999 8999999999999999999999999999987643210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC---CCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK---PSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
++........||+.|||||++.+.. -.-++||||+|||+.||+||+.||.+...
T Consensus 1390 -----------------------~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1390 -----------------------TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred -----------------------cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence 0112223556899999999997644 45689999999999999999999965433
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+-. .+. .+..+. .|.++.. ...+-.+++.+|++.||++|.++.|+++
T Consensus 1447 e~a----IMy-~V~~gh------~Pq~P~~-----ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1447 EWA----IMY-HVAAGH------KPQIPER-----LSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred hhH----HHh-HHhccC------CCCCchh-----hhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 211 111 111111 1222211 3335678999999999999999987765
No 346
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-34 Score=321.17 Aligned_cols=263 Identities=19% Similarity=0.184 Sum_probs=179.5
Q ss_pred ccccccCceEEEEEEECC--CcEEEEE------------------EeCCCCchhHHHHHHHHHHHhccCCCCccceEEEE
Q 005102 409 FVLGKSGIGIVYKVVLED--GHTLAVR------------------RLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY 468 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~--g~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 468 (714)
..||+|+||+||++..+. +...++| ++.. .......+.+|+++|++++||||+++++++
T Consensus 154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 232 (501)
T PHA03210 154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENILKIEEIL 232 (501)
T ss_pred eEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence 579999999999987643 2222222 1111 112335688999999999999999999999
Q ss_pred EeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeE
Q 005102 469 WSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548 (714)
Q Consensus 469 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 548 (714)
...+..|+|+|++. ++|.+++....... .......++.+|+.|++.||+|||+ ++||||||||+|||++.++.+|
T Consensus 233 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~~~~~vk 307 (501)
T PHA03210 233 RSEANTYMITQKYD-FDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCDGKIV 307 (501)
T ss_pred EECCeeEEEEeccc-cCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEE
Confidence 99999999999985 57887775432110 1223456778899999999999999 8999999999999999999999
Q ss_pred EcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHH
Q 005102 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 549 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~e 628 (714)
|+|||+++.+.... ........||..|+|||++.+..++.++|||||||++||
T Consensus 308 L~DFGla~~~~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 360 (501)
T PHA03210 308 LGDFGTAMPFEKER---------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLD 360 (501)
T ss_pred EEeCCCceecCccc---------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHH
Confidence 99999998653211 011123457899999999999999999999999999999
Q ss_pred HHhCCCccccCCC-C-cchhHHHHHHHHhhcCCc-------ccccCCC-CCCCC-CcH------HHHHHHHHHHhHccCC
Q 005102 629 MITGRTAVVQVGS-S-EMDLVNWMQLCIEEKKPL-------ADVLDPY-LAPDA-DKE------EEIIAVLKIAMACVHS 691 (714)
Q Consensus 629 lltG~~p~~~~~~-~-~~~l~~~~~~~~~~~~~~-------~~~~d~~-~~~~~-~~~------~~~~~l~~li~~Cl~~ 691 (714)
|++|..++..... . ...+.+.+.........+ .+.++.. ..... ... .....+.+++.+||+.
T Consensus 361 ll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~ 440 (501)
T PHA03210 361 MLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTF 440 (501)
T ss_pred HHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhcc
Confidence 9998865432211 1 111211111100000000 0000000 00000 000 0112466789999999
Q ss_pred CCCCCCCHHHHHH
Q 005102 692 SPEKRPTMRHISD 704 (714)
Q Consensus 692 dP~~RPt~~evl~ 704 (714)
||.+|||+.|+++
T Consensus 441 DP~~Rpsa~elL~ 453 (501)
T PHA03210 441 DWHLRPGAAELLA 453 (501)
T ss_pred CcccCcCHHHHhh
Confidence 9999999999986
No 347
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-33 Score=292.98 Aligned_cols=258 Identities=23% Similarity=0.294 Sum_probs=189.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc--hhHHHHHHHHHHHhcc---CCCCccceEEEEEeCCc-----eeEE
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS--QRFKEFQTEVEAIGKI---RHSNIVTLRAYYWSVDE-----KLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~-----~~lV 477 (714)
+.||+|+||.||+|++++ ++.||+|++..... .....+.+|+.+++++ +||||+++++++...+. .+++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~ 84 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV 84 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence 479999999999999875 89999999975322 2234566788877666 59999999999998776 8999
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+. ++|.+++..... ..+++..++.++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++.
T Consensus 85 ~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 85 FEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred ehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 99996 489998875432 358999999999999999999999 8999999999999999999999999999876
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
..... ......++..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 157 ~~~~~-----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 157 YSFEM-----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred ccCCc-----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 53211 0111234677999999998899999999999999999999998884
Q ss_pred cCCCCcchhHHHHHHHHh---hcCCccc-----ccCCCCCCCC--CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIE---EKKPLAD-----VLDPYLAPDA--DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~---~~~~~~~-----~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... ...+..+...... ....... .......... ........+.+++.+||+.||++||+++|++.
T Consensus 208 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 208 GTSE-ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCh-HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 3221 1111111111000 0000000 0000000000 01123356789999999999999999999874
No 348
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.3e-33 Score=288.49 Aligned_cols=246 Identities=24% Similarity=0.385 Sum_probs=196.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~ 483 (714)
+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++.+... +..++||||+++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 85 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG 85 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence 47999999999999987 589999999876543 4457889999999999999999999999988 889999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++... ..+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||.+........
T Consensus 86 ~~L~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 86 GSLSSLLKKF------GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999765 358999999999999999999999 8999999999999999999999999999876543211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
. .......++..|+|||.+.+..++.++||||||+++|+|++|+.||.....
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-- 208 (260)
T cd06606 157 G--------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-- 208 (260)
T ss_pred c--------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--
Confidence 0 011223456779999999888899999999999999999999999954331
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+..... .... +.+.. .....+.+++.+|++.||++||++.|++.
T Consensus 209 --~~~~~~~~~~-~~~~-----~~~~~-----~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 209 --PMAALYKIGS-SGEP-----PEIPE-----HLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred --hHHHHHhccc-cCCC-----cCCCc-----ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 1111111100 0000 11111 11346889999999999999999999875
No 349
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-34 Score=321.31 Aligned_cols=266 Identities=23% Similarity=0.307 Sum_probs=185.5
Q ss_pred cCHHHHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEe-----
Q 005102 398 FDLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS----- 470 (714)
Q Consensus 398 ~~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----- 470 (714)
-+++|+. +||+||||.||+++.+ ||+.+|||++.... ........+|+..+++++|||||+++..+.+
T Consensus 479 ~DFEEL~-----lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 479 NDFEELE-----LLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhhHHHH-----HhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 3455554 6999999999999975 79999999998753 3334568899999999999999988764300
Q ss_pred --------------------------------------------------C-----------------------------
Q 005102 471 --------------------------------------------------V----------------------------- 471 (714)
Q Consensus 471 --------------------------------------------------~----------------------------- 471 (714)
.
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence 0
Q ss_pred -----------------------------------CceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHH
Q 005102 472 -----------------------------------DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAK 516 (714)
Q Consensus 472 -----------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~ 516 (714)
-..||=||||+...+.++++.+... -.-....+++++|+.
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlE 708 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILE 708 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHH
Confidence 0135678888887777777654211 024567899999999
Q ss_pred HHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCC
Q 005102 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSS 596 (714)
Q Consensus 517 gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (714)
||+|+|+ .|||||||||.||++|++..+||+|||+|+............. .+ .......-....+..
T Consensus 709 GLaYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~--~~--------~~~~~g~~~~~~Ts~ 775 (1351)
T KOG1035|consen 709 GLAYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDL--SF--------STNRAGSNDGDLTSQ 775 (1351)
T ss_pred HHHHHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhcc--Cc--------cccccCCCCcccccc
Confidence 9999999 8999999999999999999999999999987431100000000 00 000001112245677
Q ss_pred CCCccccCCcccCCC---CCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCC--
Q 005102 597 NLGSYYQAPESLKVV---KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPD-- 671 (714)
Q Consensus 597 ~gt~~y~aPE~~~~~---~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~-- 671 (714)
+||..|+|||++.+. +|+.|+|+||+|||++||+. ||. ..++-+..+.... ++.++..
T Consensus 776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~----TsMERa~iL~~LR----------~g~iP~~~~ 838 (1351)
T KOG1035|consen 776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFG----TSMERASILTNLR----------KGSIPEPAD 838 (1351)
T ss_pred cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCC----chHHHHHHHHhcc----------cCCCCCCcc
Confidence 899999999999764 49999999999999999986 562 2233232222211 1112111
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 672 ADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 672 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+. .+....-.++|.++++.||.+||||.|++.
T Consensus 839 f~-~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 839 FF-DPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cc-cccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 11 122334468999999999999999999975
No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=8.8e-34 Score=294.41 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=192.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch--hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ--RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|++|.||+|... +++.+|+|++...... ....+.+|++++++++|+||+++++++...+..++||||+++ +
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~ 83 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D 83 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-C
Confidence 36999999999999975 5889999998765332 346788999999999999999999999999999999999975 8
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+.......
T Consensus 84 l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 84 LYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred HHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 888887643 358999999999999999999999 899999999999999999999999999987653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......++..|+|||.+.+. .++.++||||||+++|+|+||+.||..... .
T Consensus 153 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~ 205 (283)
T cd05118 153 -------------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--I 205 (283)
T ss_pred -------------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence 001122356779999999776 689999999999999999999999843321 1
Q ss_pred hhHHHHHHHHhhcC--CcccccC---------CC--CCC-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKK--PLADVLD---------PY--LAP-DADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~--~~~~~~d---------~~--~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+............. ......+ +. ... .........++.+++.+||+.||.+||++++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 206 DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 11111110000000 0000000 00 000 0001123457889999999999999999999875
No 351
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.3e-33 Score=288.44 Aligned_cols=246 Identities=22% Similarity=0.322 Sum_probs=188.6
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC-----CchhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e 479 (714)
.+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++.+. +..++|||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 357999999999999975 4899999987532 123346788999999999999999999998764 35789999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++++|.+++... ..+++..+++++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+++...
T Consensus 87 ~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 87 YMPGGSIKDQLKAY------GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred eCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 99999999998754 347889999999999999999999 899999999999999999999999999987543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 158 TICMS-------------------------GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred ccccc-------------------------CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 11000 00111234678899999999888999999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. ... +....... ..+.++. .....+.+++.+||. +|.+|||+.+++.
T Consensus 213 ~~----~~~-~~~~~~~~------~~~~~p~-----~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 213 EA----MAA-IFKIATQP------TKPMLPD-----GVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CH----HHH-HHHHHcCC------CCCCCCc-----ccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11 111 11111110 0111111 122368899999999 5799999998764
No 352
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=282.05 Aligned_cols=233 Identities=24% Similarity=0.293 Sum_probs=191.0
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+||+|.||+|-.++-+ +|+.+|+|++++.-. .....-..|-++|+..+||.+..+.-.|+..++.|+||||+.+|.
T Consensus 175 vLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGe 254 (516)
T KOG0690|consen 175 VLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGE 254 (516)
T ss_pred HhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCce
Confidence 7999999999999865 599999999988632 333455679999999999999999888999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|+-+|... +.+++...+-+...|..||.|||+ ++||.||||.+|.|+|.+|++||+|||+++.--
T Consensus 255 Lf~HLsre------r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I------ 319 (516)
T KOG0690|consen 255 LFFHLSRE------RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI------ 319 (516)
T ss_pred Eeeehhhh------hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc------
Confidence 99998765 458889999999999999999999 999999999999999999999999999998421
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
....+..+.+||+.|.|||++....|+.++|.|.+|||+|||+.|+.||+.... ..
T Consensus 320 ----------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--~k 375 (516)
T KOG0690|consen 320 ----------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--EK 375 (516)
T ss_pred ----------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--hH
Confidence 113455678899999999999999999999999999999999999999964322 22
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
+. ..+..+...++.-+. .+...++...|.+||.+|.
T Consensus 376 LF---eLIl~ed~kFPr~ls-------------~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 376 LF---ELILMEDLKFPRTLS-------------PEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred HH---HHHHhhhccCCccCC-------------HHHHHHHHHHhhcChHhhc
Confidence 22 222222222221111 1455778899999999995
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.1e-34 Score=303.76 Aligned_cols=258 Identities=20% Similarity=0.322 Sum_probs=189.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEe----CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS----VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 90 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM 90 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehh
Confidence 47999999999999975 58999999987642 2334677889999999999999999998763 34679999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
. |+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 91 ~-~~l~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 91 E-SDLHHIIHSD------QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred h-hhHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 5 6999988654 458999999999999999999999 89999999999999999999999999998765322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~ 216 (334)
T cd07855 161 PTE------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216 (334)
T ss_pred CcC------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence 110 0111122346788999999865 458999999999999999999999994332
Q ss_pred CCcchhHHHHHHHHhhcCCcccc------------cCC-CCCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADV------------LDP-YLAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~------------~d~-~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
.. .....+..... .+..+. .+. ....... .......+.+++.+||+.+|++|||+++++
T Consensus 217 ~~--~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 217 YV--HQLKLILSVLG--SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred hH--HHHHHHHHHhC--CChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 11 11111111000 000000 000 0000000 011235688999999999999999999987
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
.
T Consensus 293 ~ 293 (334)
T cd07855 293 Q 293 (334)
T ss_pred h
Confidence 6
No 354
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7.7e-34 Score=295.02 Aligned_cols=257 Identities=26% Similarity=0.353 Sum_probs=189.7
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||+||+|+..+ ++.||||++..... .......+|+..+++++ ||||+++++++...+..++||||+ +|+
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 83 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGN 83 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCC
Confidence 479999999999999864 78999999876432 22234567999999999 999999999999999999999999 889
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++.++..++.|++.||.|||+ ++++|+||+|+||++++++.++|+|||+++......
T Consensus 84 l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 84 LYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred HHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 9998876532 358999999999999999999999 899999999999999999999999999987543211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......++..|+|||++.. ..++.++||||||+++|||++|+.||......
T Consensus 154 --------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~-- 205 (283)
T cd07830 154 --------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI-- 205 (283)
T ss_pred --------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH--
Confidence 0112335778999998854 45799999999999999999999998433211
Q ss_pred hhHHHHHHHHh--------hcCCcccccCCCCCCCCC------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIE--------EKKPLADVLDPYLAPDAD------KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~--------~~~~~~~~~d~~~~~~~~------~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.......... +........+........ .......+.+++.+||+.||++|||++|++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 206 DQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 11110000000 000000000000000000 0011346889999999999999999999875
No 355
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.2e-33 Score=285.64 Aligned_cols=246 Identities=22% Similarity=0.351 Sum_probs=196.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||++... +++.||+|++..... ...+.+.+|++++++++|||++++++.+...+..++|+||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 85 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGD 85 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCc
Confidence 47999999999999976 589999999976533 445678999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++...... ...+++.++..++.+++.||.|||+ .+++|+||+|+||++++++.++|+|||.+.......
T Consensus 86 L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--- 157 (258)
T cd08215 86 LSQKIKKQKKE--GKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--- 157 (258)
T ss_pred HHHHHHHhhcc--CCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc---
Confidence 99999764311 1468999999999999999999999 899999999999999999999999999987653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......|++.|+|||...+..++.++||||+|+++|+|++|+.||....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----- 207 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN----- 207 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----
Confidence 01112245778999999988889999999999999999999999984322
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+.......... +.+... ....+.+++.+||..+|++|||+.++++
T Consensus 208 ~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 208 LLELALKILKGQY-------PPIPSQ-----YSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHHhcCCC-------CCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1222222211110 111111 2236889999999999999999999875
No 356
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-33 Score=288.54 Aligned_cols=244 Identities=24% Similarity=0.321 Sum_probs=194.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||++... +++.+|+|.+.... ......+.+|++++++++|+||+++++++......++||||+++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGD 85 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCC
Confidence 47999999999999865 58899999987542 2334578899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++...... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||+++.....
T Consensus 86 L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---- 156 (256)
T cd08530 86 LSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---- 156 (256)
T ss_pred HHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC----
Confidence 99998653211 1458899999999999999999999 89999999999999999999999999999865421
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||....
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~----- 205 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS----- 205 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----
Confidence 0111235677999999998889999999999999999999999994322
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+......... .. ... ......+.+++.+||..+|++|||+.++++
T Consensus 206 ~~~~~~~~~~~~--~~-----~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 206 MQDLRYKVQRGK--YP-----PIP-----PIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHHhcCC--CC-----CCc-----hhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111111111111 01 011 123346889999999999999999999875
No 357
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.5e-33 Score=287.03 Aligned_cols=236 Identities=25% Similarity=0.309 Sum_probs=189.9
Q ss_pred ccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
||+|+||.||++...+ ++.+|+|.+..... .....+..|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6999999999999864 89999999876532 2345789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---- 147 (250)
T cd05123 81 FSHLSKE------GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---- 147 (250)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC----
Confidence 9999755 358899999999999999999999 899999999999999999999999999987643210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......++..|+|||...+...+.++|+||||+++||+++|+.||.....
T Consensus 148 ------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----- 198 (250)
T cd05123 148 ------------------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----- 198 (250)
T ss_pred ------------------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----
Confidence 011223457779999999888899999999999999999999999943221
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
............. .... ....+.+++.+||..||++|||+.+
T Consensus 199 ~~~~~~~~~~~~~--------~~~~-----~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 199 KEIYEKILKDPLR--------FPEF-----LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcCCCC--------CCCC-----CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1222222211111 1111 1236789999999999999999954
No 358
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.9e-33 Score=295.03 Aligned_cols=258 Identities=23% Similarity=0.313 Sum_probs=187.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCC----------cee
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD----------EKL 475 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----------~~~ 475 (714)
..||+|+||.||+|..+ +|+.||+|+++... ......+.+|++++++++||||+++++++.+.. ..+
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 92 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFY 92 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEE
Confidence 47999999999999986 48899999987542 223356788999999999999999999987654 789
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
+||||+++ ++.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 93 lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 93 LVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred EEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCccccc
Confidence 99999976 7777776442 458999999999999999999999 89999999999999999999999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
+....... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.
T Consensus 164 ~~~~~~~~---------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~ 216 (302)
T cd07864 164 RLYNSEES---------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKP 216 (302)
T ss_pred ccccCCcc---------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCC
Confidence 76542210 00111223567999998865 357899999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCC--ccccc--------CCCCCCCC----CcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKP--LADVL--------DPYLAPDA----DKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~--------d~~~~~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
||.... .......+........+ ...+. ++...... ........+.+++.+||+.||++|||++
T Consensus 217 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 294 (302)
T cd07864 217 IFQANQ--ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAE 294 (302)
T ss_pred CCCCCC--hHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 994321 11111111111111000 00000 00000000 0001234688999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
+++.
T Consensus 295 ~il~ 298 (302)
T cd07864 295 EALN 298 (302)
T ss_pred HHhc
Confidence 9875
No 359
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.5e-34 Score=302.38 Aligned_cols=260 Identities=19% Similarity=0.301 Sum_probs=190.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~ 480 (714)
..||+|+||.||+|+.. +++.||||.+... .......+.+|+.++++++|+||+++++++... ...++||||
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYEL 90 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeC
Confidence 47999999999999975 5899999998753 222345678899999999999999999988654 347999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+. ++|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+++....
T Consensus 91 ~~-~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 91 MD-TDLHQIIRSS------QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred CC-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 95 6899888654 458999999999999999999999 8999999999999999999999999999876432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...
T Consensus 161 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 161 KG----------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred Cc----------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 11 00112235677999998864 46899999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcC----------C-------cccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKK----------P-------LADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~----------~-------~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
. ................ . .....++.... ........+.+++.+||+.+|++|||++|+
T Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rps~~el 288 (337)
T cd07858 213 D--YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFAR--LFPHANPLAIDLLEKMLVFDPSKRITVEEA 288 (337)
T ss_pred C--hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHH--HcccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence 1 1111111111000000 0 00000000000 001123467899999999999999999999
Q ss_pred HHH--Hhhhh
Q 005102 703 SDA--LDRLI 710 (714)
Q Consensus 703 l~~--L~~i~ 710 (714)
++- ++.+.
T Consensus 289 l~h~~~~~~~ 298 (337)
T cd07858 289 LAHPYLASLH 298 (337)
T ss_pred HcCcchhhhc
Confidence 875 55443
No 360
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.2e-33 Score=298.47 Aligned_cols=265 Identities=22% Similarity=0.323 Sum_probs=196.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCC-----ceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-----EKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lV~e~ 480 (714)
..||+|+||.||+|+..+ ++.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..|+||||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~ 85 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTEL 85 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecc
Confidence 479999999999999864 8999999987653 334567899999999999999999999988765 78999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
++ ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 86 ~~-~~l~~~l~~~------~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 86 ME-TDLHKVIKSP------QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred hh-hhHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 97 5899988754 368999999999999999999999 8999999999999999999999999999986543
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.... ........++..|+|||.+.+. .++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 156 DEDE-------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred cccc-------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 2100 0011223457789999999887 7899999999999999999999999433
Q ss_pred CCCcchhHHHHHHHHhhcC----------CcccccCCC-CCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKK----------PLADVLDPY-LAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~----------~~~~~~d~~-~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. .+....+........ ...+.+... ...... .......+.+++.+||+.+|++|||+++++.
T Consensus 211 ~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 211 DY--IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred CH--HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 21 111111111100000 000000000 000000 0012346789999999999999999999987
Q ss_pred H--Hhhhh
Q 005102 705 A--LDRLI 710 (714)
Q Consensus 705 ~--L~~i~ 710 (714)
. ++++.
T Consensus 289 ~~~~~~~~ 296 (330)
T cd07834 289 HPYLAQLH 296 (330)
T ss_pred CccHHhhc
Confidence 3 55443
No 361
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.8e-33 Score=300.37 Aligned_cols=254 Identities=22% Similarity=0.336 Sum_probs=185.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 479 (714)
..||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.... ..++|+|
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 100 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMP 100 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEec
Confidence 57999999999999975 58999999987532 222356889999999999999999999987543 4589999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+.. +|..+.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 101 YMQT-DLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred cccc-CHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 9964 7776652 348899999999999999999999 899999999999999999999999999987432
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 ~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 169 AE-------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred CC-------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 10 112234677999999876 4689999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhh-cCCc------------ccccC--CCCCC-CCC--cHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 639 VGSSEMDLVNWMQLCIEE-KKPL------------ADVLD--PYLAP-DAD--KEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~-~~~~------------~~~~d--~~~~~-~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
.. .... +...... +.+. ..... +.... ... .......+.+++.+||+.||++||+++
T Consensus 218 ~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~ 292 (342)
T cd07879 218 KD--YLDQ---LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT 292 (342)
T ss_pred CC--HHHH---HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 21 1111 1111110 0000 00000 00000 000 001123578999999999999999999
Q ss_pred HHHHH--Hhhhh
Q 005102 701 HISDA--LDRLI 710 (714)
Q Consensus 701 evl~~--L~~i~ 710 (714)
+++.. ++.+.
T Consensus 293 e~l~h~~f~~~~ 304 (342)
T cd07879 293 EALEHPYFDSFR 304 (342)
T ss_pred HHhcCcchhhcc
Confidence 99843 55543
No 362
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.8e-33 Score=294.94 Aligned_cols=268 Identities=21% Similarity=0.231 Sum_probs=187.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCC--------ceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--------EKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------~~~lV 477 (714)
..||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.... ..++|
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv 93 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMV 93 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEE
Confidence 47999999999999976 489999999865422 22346788999999999999999999876533 35899
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+.. ++...+.... ..+++.++..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 94 ~~~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 94 TPYMDH-DLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred EecCCc-CHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 999965 7877776542 358999999999999999999999 8999999999999999999999999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
............ ...........+++.|+|||.+.+. .++.++|||||||++|||++|+.||
T Consensus 165 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 165 YDGPPPNPKGGG-----------------GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred ccCCCcccccCC-----------------cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 543211100000 0001122334567889999988654 5799999999999999999999998
Q ss_pred ccCCCCcchhHHHHHHHHhh--------cCCcccccCCCCCCCCC--c----HHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEE--------KKPLADVLDPYLAPDAD--K----EEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~d~~~~~~~~--~----~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
.... .......+...... ........+........ . ......+.+++.+||..||++|||+.|+
T Consensus 228 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el 305 (311)
T cd07866 228 QGKS--DIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA 305 (311)
T ss_pred CCCC--HHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence 4321 11111111110000 00000000000000000 0 0112467899999999999999999988
Q ss_pred HH
Q 005102 703 SD 704 (714)
Q Consensus 703 l~ 704 (714)
+.
T Consensus 306 l~ 307 (311)
T cd07866 306 LE 307 (311)
T ss_pred hc
Confidence 74
No 363
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.8e-33 Score=298.51 Aligned_cols=261 Identities=24% Similarity=0.319 Sum_probs=188.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCC--ceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVD--EKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~--~~~lV~e~~~ 482 (714)
+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +||||+++++++...+ ..++||||++
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~ 92 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME 92 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc
Confidence 47999999999999976 5889999988643 223345678899999999 9999999999987543 5799999997
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
++|..++... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 93 -~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 93 -TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred -cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 5999888643 47889999999999999999999 899999999999999999999999999998654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
... .........|+..|+|||.+.+ ..++.++||||||+++|||+||+.||.....
T Consensus 162 ~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 162 ENP-----------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred ccc-----------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 100 0011122346888999998865 4578999999999999999999999843221
Q ss_pred CcchhHHHHHHHHhhc----------CCcccccC----CCCCCCC-CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEK----------KPLADVLD----PYLAPDA-DKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~----------~~~~~~~d----~~~~~~~-~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
. +....+....... ....++++ ....... .......++.+++.+||+.||++|||+.++++.
T Consensus 219 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 219 L--NQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred H--HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 1 1111000000000 00000000 0000000 000123468899999999999999999999864
No 364
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.7e-33 Score=290.61 Aligned_cols=257 Identities=25% Similarity=0.352 Sum_probs=192.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|+||.||+|+..+ ++.||+|.+.... ....+.+..|++++++++|+||+++++++...+..++||||++ ++
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MD 83 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cC
Confidence 369999999999999865 8999999998753 3334678899999999999999999999999999999999997 59
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++..+.+++.|++.||+|||+ .+|+||||+|+||++++++.+||+|||+++.......
T Consensus 84 l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 84 LKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred HHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 999997653 358999999999999999999999 8999999999999999999999999999876532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||.... ..
T Consensus 154 --------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--~~ 205 (282)
T cd07829 154 --------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS--EI 205 (282)
T ss_pred --------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc--HH
Confidence 01112235679999998766 78999999999999999999999984321 11
Q ss_pred hhHHHHHHHHhhcCC-----cccc--cCCCCCC---CCC---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKP-----LADV--LDPYLAP---DAD---KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~-----~~~~--~d~~~~~---~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+....+......... .... .+..... ... .......+.+++.+||+.||++||++++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 206 DQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 111111111000000 0000 0000000 000 0011346899999999999999999999875
No 365
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.4e-33 Score=290.61 Aligned_cols=261 Identities=20% Similarity=0.287 Sum_probs=196.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++.+++ ||||+++++++...+..++||||+++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPN 86 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCC
Confidence 47999999999999976 5899999998763 2233467889999999998 99999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++... ..+++..+..|+.|++.||+|||+ .+++|+||||+||+++.++.++++|||++........
T Consensus 87 ~~L~~~l~~~------~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 87 GELLQYIRKY------GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 9999999765 358999999999999999999999 8999999999999999999999999999986543221
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........... ...............++..|+|||...+..++.++||||||++++|+++|+.||.....
T Consensus 158 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-- 227 (280)
T cd05581 158 PESNKGDATNI--------DSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-- 227 (280)
T ss_pred cccCCCCCccc--------cccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--
Confidence 10000000000 00000001122334567889999999888899999999999999999999999953321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH----HHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM----RHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~----~evl~ 704 (714)
....+........+. .. ....+.+++.+||+.+|++|||+ +++++
T Consensus 228 ---~~~~~~~~~~~~~~~--------~~-----~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 ---YLTFQKILKLEYSFP--------PN-----FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHHHhcCCCCC--------Cc-----cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111122211111111 11 12357899999999999999999 66653
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.6e-33 Score=296.15 Aligned_cols=260 Identities=22% Similarity=0.272 Sum_probs=185.7
Q ss_pred ccccccCceEEEEEEECC---CcEEEEEEeCCC--CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeC----CceeEEE
Q 005102 409 FVLGKSGIGIVYKVVLED---GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSV----DEKLLIY 478 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~----~~~~lV~ 478 (714)
+.||+|+||.||+++... +..||+|++... .....+.+.+|+++++++ +||||+++++++... ...++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 85 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYE 85 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEE
Confidence 479999999999999753 679999998753 222346788999999999 599999999976432 4568889
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
||+. ++|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 86 e~~~-~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 86 ELME-ADLHQIIRSG------QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred eccc-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 9985 6999988654 458999999999999999999999 89999999999999999999999999999765
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
....... ........||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.
T Consensus 156 ~~~~~~~------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 156 SENPGEN------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred ccccccc------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 3221100 011123456888999998765 468999999999999999999999984
Q ss_pred cCCCCcchhHHHHHHHHh------------hc-CCcccccCCCCCCCCC--cHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIE------------EK-KPLADVLDPYLAPDAD--KEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~------------~~-~~~~~~~d~~~~~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
.... ......+..... .. ................ .......+.+++.+||+.||++|||+.++
T Consensus 212 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~l 289 (332)
T cd07857 212 GKDY--VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEA 289 (332)
T ss_pred CCCH--HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 3221 111111110000 00 0000000000000000 00112468899999999999999999998
Q ss_pred HH
Q 005102 703 SD 704 (714)
Q Consensus 703 l~ 704 (714)
+.
T Consensus 290 l~ 291 (332)
T cd07857 290 LE 291 (332)
T ss_pred hc
Confidence 64
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.4e-33 Score=296.77 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=184.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 479 (714)
+.||+|+||.||++... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 100 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMP 100 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEe
Confidence 47999999999999864 68999999986532 223456889999999999999999999987643 3589999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 101 ~~-~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 101 FM-GTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 99 7799888753 348899999999999999999999 899999999999999999999999999987542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..
T Consensus 170 ~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 170 SE-------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cC-------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 112234778999999875 4588999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcc-c------------ccC--CCCCC-CCC--cHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLA-D------------VLD--PYLAP-DAD--KEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~-~------------~~d--~~~~~-~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
... ............... + ... +.... ... .......+.+++.+|++.||++|||+.
T Consensus 219 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~ 293 (343)
T cd07880 219 HDH-----LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAA 293 (343)
T ss_pred CCH-----HHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHH
Confidence 211 111111111000000 0 000 00000 000 001223578999999999999999999
Q ss_pred HHH
Q 005102 701 HIS 703 (714)
Q Consensus 701 evl 703 (714)
+++
T Consensus 294 ~~l 296 (343)
T cd07880 294 EAL 296 (343)
T ss_pred HHh
Confidence 988
No 368
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.1e-32 Score=317.16 Aligned_cols=141 Identities=26% Similarity=0.384 Sum_probs=126.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++. +++.||||+++... ......+.+|+.+++.++||||+++++++...+..|+||||++++
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~ 89 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGG 89 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCC
Confidence 47999999999999986 58999999997542 223467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
+|.+++... ..+++..+++|+.||+.||+|||. .+|+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~L~~li~~~------~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 90 DVKSLLHIY------GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 999999754 347889999999999999999999 89999999999999999999999999999753
No 369
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-35 Score=274.78 Aligned_cols=260 Identities=22% Similarity=0.331 Sum_probs=189.6
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC--------CceeEEE
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--------DEKLLIY 478 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~~~lV~ 478 (714)
.||+|.||+||+|+.++ |+.||+|++-.. .........+|+++|..++|+|++.+++.|... ...|+||
T Consensus 24 kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf 103 (376)
T KOG0669|consen 24 KIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVF 103 (376)
T ss_pred hcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeH
Confidence 69999999999999765 788999876432 222234568999999999999999999988642 2479999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
++|+. +|.-+|.... .+++..++.+++.++..||.|+|. ..|+|||+||+|+||+.++.+||+|||+|+.+
T Consensus 104 ~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 104 DFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred HHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 99977 9999987553 568999999999999999999999 89999999999999999999999999999876
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
....... ....+..+-|.+|++||.+.|. .|+++.|||+.|||+.||+||.+.+.
T Consensus 175 s~~~n~~------------------------kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 175 STSKNVV------------------------KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred ecccccC------------------------CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 5332110 1112344458899999999875 48999999999999999999988773
Q ss_pred cCCCCcchhHHHHHHHHh----hcC------Cccccc--CCCCCCCCC-cHHHHH------HHHHHHhHccCCCCCCCCC
Q 005102 638 QVGSSEMDLVNWMQLCIE----EKK------PLADVL--DPYLAPDAD-KEEEII------AVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~----~~~------~~~~~~--d~~~~~~~~-~~~~~~------~l~~li~~Cl~~dP~~RPt 698 (714)
. +.+......+..... +-+ ++.+.+ .|....... .++... ..++++..++..||.+|++
T Consensus 231 g--nteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ 308 (376)
T KOG0669|consen 231 G--NTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRID 308 (376)
T ss_pred C--ChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcc
Confidence 2 222222222221111 000 001111 110000000 011111 5678999999999999999
Q ss_pred HHHHHH
Q 005102 699 MRHISD 704 (714)
Q Consensus 699 ~~evl~ 704 (714)
+.+++.
T Consensus 309 ad~aln 314 (376)
T KOG0669|consen 309 ADQALN 314 (376)
T ss_pred hHhhhc
Confidence 998874
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.4e-33 Score=298.35 Aligned_cols=258 Identities=21% Similarity=0.300 Sum_probs=184.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeC--------------Cc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--------------DE 473 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------------~~ 473 (714)
+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++... ..
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS 90 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccce
Confidence 47999999999999975 4899999998776655567789999999999999999999876543 34
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC-CCCCeEEccc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG-HNMEPHVSDF 552 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DF 552 (714)
.++||||++ ++|.+++.. ..+++..++.++.||+.||+|||+ .+|+||||||+||+++ +++.+|++||
T Consensus 91 ~~lv~e~~~-~~L~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 91 VYIVQEYME-TDLANVLEQ-------GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred EEEEeeccc-ccHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEECCc
Confidence 689999997 599888753 248899999999999999999999 8999999999999997 4567899999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHh
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~ellt 631 (714)
|+++........ ........++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 160 g~~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~ 214 (342)
T cd07854 160 GLARIVDPHYSH-------------------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 214 (342)
T ss_pred ccceecCCcccc-------------------------ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHh
Confidence 998754321100 000111235778999998754 557899999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhc-----C----CcccccC-CCCCCCCCc----HHHHHHHHHHHhHccCCCCCCCC
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEK-----K----PLADVLD-PYLAPDADK----EEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~-----~----~~~~~~d-~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
|+.||......+ ........ .... . ....... ......... .....++.+++.+||..||++||
T Consensus 215 g~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 215 GKPLFAGAHELE-QMQLILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred CCCCCCCCCHHH-HHHHHHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhcc
Confidence 999994332111 00000000 0000 0 0000000 000000000 01223578999999999999999
Q ss_pred CHHHHHH
Q 005102 698 TMRHISD 704 (714)
Q Consensus 698 t~~evl~ 704 (714)
|++|++.
T Consensus 293 t~~ell~ 299 (342)
T cd07854 293 TAEEALM 299 (342)
T ss_pred CHHHHhC
Confidence 9999974
No 371
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.4e-33 Score=285.54 Aligned_cols=245 Identities=24% Similarity=0.307 Sum_probs=187.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC-----CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG-----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||++.... +..+++|.++.. ......++.+|+.++++++||||+++++++...+..++||||++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCE 85 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCC
Confidence 479999999999998754 445666655432 22233467789999999999999999999998889999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+++|.+++...... ...+++.+++.++.|++.||.|||+ .+++|+||||+||++++ +.+||+|||+++......
T Consensus 86 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 86 GRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred CCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999988642211 1468999999999999999999999 89999999999999975 569999999987653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......|+..|+|||.+.+..++.++||||||+++|+|++|..||...
T Consensus 160 ----------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~--- 208 (260)
T cd08222 160 ----------------------------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ--- 208 (260)
T ss_pred ----------------------------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc---
Confidence 0111233577899999998888899999999999999999999998421
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............. .+... ......+.+++.+||..+|++||++.|+++
T Consensus 209 --~~~~~~~~~~~~~-------~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 209 --NFLSVVLRIVEGP-------TPSLP-----ETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --cHHHHHHHHHcCC-------CCCCc-----chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1122222211111 11111 122346889999999999999999999875
No 372
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.3e-32 Score=291.81 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=185.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~~~~g 484 (714)
..||+|+||.||++... +++.||||++... .....+.+.+|++++++++||||+++++++.. .+..++||||+ ++
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~ 94 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GT 94 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-cc
Confidence 47999999999999865 6899999988653 22234678899999999999999999999876 55789999998 56
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 95 ~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--- 161 (328)
T cd07856 95 DLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--- 161 (328)
T ss_pred CHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccCCC---
Confidence 898888643 47888899999999999999999 89999999999999999999999999998743211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.....++..|+|||.+.+ ..++.++||||||+++|||+||+.||.....
T Consensus 162 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-- 211 (328)
T cd07856 162 ----------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-- 211 (328)
T ss_pred ----------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 111234677999998865 5689999999999999999999999943221
Q ss_pred chhHHHHHHHHhhc----------CCcccccCCC-CCCCCCcH----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 644 MDLVNWMQLCIEEK----------KPLADVLDPY-LAPDADKE----EEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 644 ~~l~~~~~~~~~~~----------~~~~~~~d~~-~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
......+....... ....+..... ........ .....+.+++.+||+.+|++|||+++++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 212 VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111111000000 0000000000 00000000 122468899999999999999999998754
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.3e-33 Score=280.86 Aligned_cols=220 Identities=21% Similarity=0.218 Sum_probs=174.5
Q ss_pred cCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhhhhhC
Q 005102 414 SGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHG 492 (714)
Q Consensus 414 G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 492 (714)
|.||.||+++.. +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999975 58999999997643 234556666666799999999999999999999999999999999875
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCC
Q 005102 493 KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRM 572 (714)
Q Consensus 493 ~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 572 (714)
. ..+++..+..++.|++.||+|||+ ++|+||||||+||++++++.++++|||.+......
T Consensus 79 ~------~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------- 138 (237)
T cd05576 79 F------LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------- 138 (237)
T ss_pred h------cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----------
Confidence 4 348999999999999999999999 89999999999999999999999999987654211
Q ss_pred CCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHH
Q 005102 573 PAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQL 652 (714)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~ 652 (714)
.....++..|+|||...+..++.++||||+|+++|||++|+.|+.......
T Consensus 139 --------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--------- 189 (237)
T cd05576 139 --------------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--------- 189 (237)
T ss_pred --------------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------
Confidence 111223566999999988889999999999999999999998873221100
Q ss_pred HHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 653 CIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 653 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
... ....++.. ....+.+++.+||+.||++|||+.
T Consensus 190 --~~~------~~~~~~~~-----~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 190 --NTH------TTLNIPEW-----VSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred --ccc------cccCCccc-----CCHHHHHHHHHHccCCHHHhcCCC
Confidence 000 00011111 123578899999999999999973
No 374
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-33 Score=248.40 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=189.3
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.||+|.||+||+|+.+ +++.||+|+++..+ +.......+|+-+++.++|+|||++++....+....+|+|||.. +|
T Consensus 9 kigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dl 87 (292)
T KOG0662|consen 9 KIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DL 87 (292)
T ss_pred hhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HH
Confidence 6999999999999965 48899999987643 22335678999999999999999999999999999999999954 89
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
..+...-. ..++.+..+.++.|+++||.|.|+ +.+.|||+||.|.||+.+|+.|++|||+|+.+....
T Consensus 88 kkyfdsln-----g~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv---- 155 (292)
T KOG0662|consen 88 KKYFDSLN-----GDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---- 155 (292)
T ss_pred HHHHHhcC-----CcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce----
Confidence 98887665 358889999999999999999999 899999999999999999999999999999765321
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHh-CCCccccCCCCcc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEM 644 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~ 644 (714)
. -.+..+-|.+|++|.++.+.+ |++..|+||.||++.|+.. |++.|+ ...-+.
T Consensus 156 -----------------------r-cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp-g~dvdd 210 (292)
T KOG0662|consen 156 -----------------------R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-GNDVDD 210 (292)
T ss_pred -----------------------E-eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC-CCcHHH
Confidence 0 111223488999999998876 7999999999999999988 555553 222222
Q ss_pred hhHHHHHHHH---hhcC-CcccccCCCCCCCCC----cHHH----HHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCI---EEKK-PLADVLDPYLAPDAD----KEEE----IIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~---~~~~-~~~~~~d~~~~~~~~----~~~~----~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+....+..- ++.+ .+...-|-..-+.+. ..+. ...=.+++++.+.-+|.+|.++++.++
T Consensus 211 qlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 211 QLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred HHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2222221110 1111 111111111111111 1111 112357888888889999999988764
No 375
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.5e-32 Score=293.72 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=183.3
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
..||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++... ...+++++
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~ 102 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 102 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEeh
Confidence 4699999999999986 468999999997542 22345688899999999999999999988643 34678888
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
++ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 103 ~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 103 LM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred hc-ccCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 77 7899888753 248899999999999999999999 899999999999999999999999999987432
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 172 ~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 172 DE-------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cc-------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 10 112245778999999866 4688999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccC--------------CCCCC-CCC--cHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLD--------------PYLAP-DAD--KEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d--------------~~~~~-~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
.... ..+.... ... ......+.. +.... ... .......+.+++.+|++.||.+|||+.+
T Consensus 221 ~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 296 (345)
T cd07877 221 TDHI-DQLKLIL-RLV--GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 296 (345)
T ss_pred CCHH-HHHHHHH-HHh--CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence 2211 1111110 000 000000000 00000 000 0001235789999999999999999999
Q ss_pred HHH
Q 005102 702 ISD 704 (714)
Q Consensus 702 vl~ 704 (714)
++.
T Consensus 297 ~l~ 299 (345)
T cd07877 297 ALA 299 (345)
T ss_pred Hhc
Confidence 875
No 376
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8e-33 Score=295.55 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=186.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCc------eeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE------KLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lV~e 479 (714)
..||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++...+. .++|+|
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 100 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTH 100 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEe
Confidence 47999999999999986 4789999998753 22234567889999999999999999998876554 899999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 101 ~~-~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 101 LM-GADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 99 6699998864 348999999999999999999999 899999999999999999999999999987542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||..
T Consensus 170 ~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 170 DE-------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred cc-------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 11 112234677999999865 3678999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcC-Cccccc------------C---CCCCCCCC--cHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKK-PLADVL------------D---PYLAPDAD--KEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~-~~~~~~------------d---~~~~~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
... . ..+........ +..++. . ........ ......++.+++.+||+.||++|||+.
T Consensus 219 ~~~--~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ 293 (343)
T cd07851 219 SDH--I---DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA 293 (343)
T ss_pred CCh--H---HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHH
Confidence 221 1 11111111000 000000 0 00000000 001134688999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
+|+.
T Consensus 294 ell~ 297 (343)
T cd07851 294 EALA 297 (343)
T ss_pred HHhc
Confidence 9875
No 377
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-33 Score=274.76 Aligned_cols=257 Identities=18% Similarity=0.261 Sum_probs=200.4
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeC-CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lV~e~ 480 (714)
.++-+|.||+||+|.|++ .+.|-||.++.. +......+..|.-.+..+.|||+..+.+.+.+. ...+++|.+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~ 369 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA 369 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence 467899999999997653 466788887765 334456788999999999999999999998764 567899999
Q ss_pred cCCCCHhhhhhCCCCCCC--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 481 IPNGSLATALHGKPGMVS--FTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
+.-|+|..+|...++... .+.++-.+.+.++.|++.|++|||. ++|||.||.++|.+||+..++||+|=.++|.+
T Consensus 370 ~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDL 446 (563)
T KOG1024|consen 370 TGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSRDL 446 (563)
T ss_pred cCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhcccc
Confidence 999999999983332211 1456777889999999999999999 99999999999999999999999999999876
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVV 637 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~ 637 (714)
-+.+.+.-..+ .....-||+||.+....|+.++|||||||+||||+| |+.||.
T Consensus 447 FP~DYhcLGDn--------------------------EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya 500 (563)
T KOG1024|consen 447 FPGDYHCLGDN--------------------------ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA 500 (563)
T ss_pred CcccccccCCC--------------------------CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc
Confidence 54432211111 111334999999999999999999999999999999 999995
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
+.+..+ +...++++..+.+ |. +++.++..+|.-||..+|++||+++|++..|.+...
T Consensus 501 eIDPfE------m~~ylkdGyRlaQ---P~--------NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 501 EIDPFE------MEHYLKDGYRLAQ---PF--------NCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ccCHHH------HHHHHhccceecC---CC--------CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 443222 2233444443222 21 244579999999999999999999999999988653
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=280.91 Aligned_cols=234 Identities=22% Similarity=0.301 Sum_probs=187.2
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+||+|+||+|..+..+. .+.+|||++++... ...+--+.|-++|.-- +-|.+++++.+|++-+.+|+||||+.+
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnG 434 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNG 434 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecC
Confidence 489999999999998765 57899999987522 2223345677777766 578999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|..++++- .++.+..+.-+|.+||-||-|||+ ++||.||||..|||+|.+|++||+|||+++.--..
T Consensus 435 GDLMyhiQQ~------GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~-- 503 (683)
T KOG0696|consen 435 GDLMYHIQQV------GKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD-- 503 (683)
T ss_pred chhhhHHHHh------cccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccccC--
Confidence 9999998765 457788899999999999999999 99999999999999999999999999999742111
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
..++.+..||+.|+|||++..++|+..+|.|||||+||||+.|++||.. .++
T Consensus 504 --------------------------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG--eDE 555 (683)
T KOG0696|consen 504 --------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG--EDE 555 (683)
T ss_pred --------------------------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC--CCH
Confidence 3345677899999999999999999999999999999999999999942 222
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
.+..+.+.+..-..+. .-..+..++....+.+.|.+|.
T Consensus 556 ---~elF~aI~ehnvsyPK-------------slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 556 ---DELFQAIMEHNVSYPK-------------SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ---HHHHHHHHHccCcCcc-------------cccHHHHHHHHHHhhcCCcccc
Confidence 2333333333322111 1223566777788888999884
No 379
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=310.91 Aligned_cols=243 Identities=25% Similarity=0.291 Sum_probs=195.1
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+||+|+||.|..++++. ++.||+|++.+- ......-|..|-++|..-+.+-|++++-.|.+..+.|+|||||+|||
T Consensus 82 vIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGD 161 (1317)
T KOG0612|consen 82 VIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGD 161 (1317)
T ss_pred HhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCch
Confidence 89999999999999865 889999999873 23344568999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|-.++... .++++..++-|+..|.-||.-||+ .|+|||||||+|||||..|++||+|||.+-.++.++
T Consensus 162 lltLlSk~------~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG--- 229 (1317)
T KOG0612|consen 162 LLTLLSKF------DRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG--- 229 (1317)
T ss_pred HHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhcCCCC---
Confidence 99999765 358899999999999999999999 899999999999999999999999999887665332
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC----C-CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK----V-VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.......+|||.|++||+++ + +.|+..+|.||+||++|||+.|..||+.
T Consensus 230 ------------------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-- 283 (1317)
T KOG0612|consen 230 ------------------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-- 283 (1317)
T ss_pred ------------------------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH--
Confidence 34456778999999999995 3 5789999999999999999999999952
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC---HHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT---MRHIS 703 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl 703 (714)
..+++-+..+...+..+ . ++.+. +...+..+||.+.+. +|+.|.. ++++.
T Consensus 284 ---dslveTY~KIm~hk~~l-~-----FP~~~---~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 284 ---DSLVETYGKIMNHKESL-S-----FPDET---DVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred ---HHHHHHHHHHhchhhhc-C-----CCccc---ccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 34555444444432211 0 11111 123356677776553 6888876 66654
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=283.23 Aligned_cols=255 Identities=25% Similarity=0.346 Sum_probs=190.7
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC-------chhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG-------SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e 479 (714)
++||+|||++||+|.+ ...+.||||+-.... ....+...+|.+|-+.+.||.||++|+|+.- .+..|-|+|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE 548 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE 548 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence 4799999999999985 447889999754321 1123567899999999999999999999975 456789999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC---CCCCeEEcccchhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG---HNMEPHVSDFGLAR 556 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~ 556 (714)
||++.+|.-+|+.. ..+++.+++.|+.||..||.||.+-.| +|||-||||.|||+- ..|.+||.|||+++
T Consensus 549 YceGNDLDFYLKQh------klmSEKEARSIiMQiVnAL~YLNEikp-PIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 549 YCEGNDLDFYLKQH------KLMSEKEARSIIMQIVNALKYLNEIKP-PIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred ecCCCchhHHHHhh------hhhhHHHHHHHHHHHHHHHHHHhccCC-CeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 99999999999877 458999999999999999999998765 899999999999994 35889999999999
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC----CCCchhhhHHHHHHHHHHHhC
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV----KPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DVwS~Gvvl~elltG 632 (714)
.++.+... +......+....||.+|.+||.+.-+ +++.|+||||.|||+|..+.|
T Consensus 622 IMdddSy~---------------------~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYG 680 (775)
T KOG1151|consen 622 IMDDDSYN---------------------SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYG 680 (775)
T ss_pred hccCCccC---------------------cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhcc
Confidence 98654211 01112334456789999999998644 468899999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
+.||-.... ..++.+ +.. +...-.-.+++.+ ....+...+|++||.+.-++|....++.
T Consensus 681 rKPFGhnqs-QQdILq-------eNT-IlkAtEVqFP~KP---vVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 681 RKPFGHNQS-QQDILQ-------ENT-ILKATEVQFPPKP---VVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred CCCCCCchh-HHHHHh-------hhc-hhcceeccCCCCC---ccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 999932211 111111 111 0000011111111 1223566899999999999998777664
No 381
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=289.70 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=196.3
Q ss_pred cCHHHHHHhc-cccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc
Q 005102 398 FDLDELLKAS-AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE 473 (714)
Q Consensus 398 ~~~~~l~~~~-~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 473 (714)
.++..+++.. .++||.|.||+||-|.++ +|+.||||++.+.. .....+..+|+.||..++||.||.+--.|++.+.
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER 637 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce
Confidence 3344444432 478999999999999975 69999999998752 2233678899999999999999999999999999
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC---CCeEEc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVS 550 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~ 550 (714)
.++|||-+ +||..+++-.... .+|++...+-++.||+.||.|||. ++|+|+||||+|||+.+. -++||+
T Consensus 638 vFVVMEKl-~GDMLEMILSsEk----gRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 638 VFVVMEKL-HGDMLEMILSSEK----GRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred EEEEehhh-cchHHHHHHHhhc----ccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeec
Confidence 99999999 5677776644322 568888889999999999999999 999999999999999654 469999
Q ss_pred ccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHH
Q 005102 551 DFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630 (714)
Q Consensus 551 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ell 630 (714)
|||+|+++.+. .-..+.+||+.|.|||+++...|...-|+||.|||+|--+
T Consensus 710 DFGfARiIgEk-----------------------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsL 760 (888)
T KOG4236|consen 710 DFGFARIIGEK-----------------------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSL 760 (888)
T ss_pred cccceeecchh-----------------------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEe
Confidence 99999987532 1234567899999999999999999999999999999999
Q ss_pred hCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 631 TGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 631 tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
+|..||.+ +.++.+.++. ..++-| .....+.....+++|...|+..=++|-|.++.+
T Consensus 761 SGTFPFNE----dEdIndQIQN--------AaFMyP----p~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 761 SGTFPFNE----DEDINDQIQN--------AAFMYP----PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cccccCCC----ccchhHHhhc--------cccccC----CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 99999932 2333332221 111111 111233444677888888888888888876654
No 382
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3e-33 Score=278.24 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=193.0
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccC-C-C----CccceEEEEEeCCceeEEEeccC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-H-S----NIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+|+|+||.|-.+.++. +..||||+++.-... .+...-|++++.++. + | -+|.+.++|.-.++.|+|+|.+
T Consensus 96 ~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell- 173 (415)
T KOG0671|consen 96 LLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL- 173 (415)
T ss_pred hhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-
Confidence 69999999999999754 789999999765433 356678999999994 2 3 3788888999999999999998
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-------------------
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH------------------- 543 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~------------------- 543 (714)
|-|+++++..+.. .+++...++.|+.|++++++|||+ .+++|-||||+|||+-+
T Consensus 174 G~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 174 GLSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred ChhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 5699999987643 678999999999999999999999 89999999999999932
Q ss_pred -CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHH
Q 005102 544 -NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622 (714)
Q Consensus 544 -~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~ 622 (714)
+..+||+|||.|++..... +..+.|..|+|||++.+-.++.++||||+
T Consensus 247 ks~~I~vIDFGsAtf~~e~h-------------------------------s~iVsTRHYRAPEViLgLGwS~pCDvWSi 295 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHH-------------------------------STIVSTRHYRAPEVILGLGWSQPCDVWSI 295 (415)
T ss_pred CCcceEEEecCCcceeccCc-------------------------------ceeeeccccCCchheeccCcCCccCceee
Confidence 2358999999998754321 22344788999999999999999999999
Q ss_pred HHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCC-----------------CCC-------C-------
Q 005102 623 GVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPY-----------------LAP-------D------- 671 (714)
Q Consensus 623 Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~-----------------~~~-------~------- 671 (714)
||||.|+.||...|....+. +....++.++.. .+ ..++... ... .
T Consensus 296 GCIL~ElytG~~LFqtHen~--EHLaMMerIlGp-~P-~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~ 371 (415)
T KOG0671|consen 296 GCILVELYTGETLFQTHENL--EHLAMMERILGP-IP-SRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKY 371 (415)
T ss_pred eeEEEEeeccceecccCCcH--HHHHHHHHhhCC-Cc-HHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHH
Confidence 99999999999999554322 222333332221 00 0110000 000 0
Q ss_pred -CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 672 -ADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 672 -~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.....+..++.+++.+||..||.+|+|+.|++.
T Consensus 372 ~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 372 MLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred hccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 012356678999999999999999999999875
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-32 Score=294.23 Aligned_cols=245 Identities=22% Similarity=0.336 Sum_probs=196.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEe-----CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS-----VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-----~~~~~lV~e~~ 481 (714)
++||+|.+|.||+++.+ +|+.+|||+....... .++...|.++++.. .|||++.++|+|.. ++.++||||||
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 48999999999999964 5888899887664333 36778899999988 69999999999874 46789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
.+|+..++++...+ .++.|..+..|++.+++||.|||. +.++|||+|-.|||++.++.+|+.|||++..++..
T Consensus 104 ~gGSVTDLVKn~~g----~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 104 GGGSVTDLVKNTKG----NRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred CCccHHHHHhhhcc----cchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 99999999987764 579999999999999999999999 89999999999999999999999999998765421
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
.....+..||++|||||++.. ..|+..+|+||+|++..||.-|.+|+
T Consensus 177 ----------------------------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 177 ----------------------------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred ----------------------------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 234456778999999999853 34678999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+... ... .+...+. --|.+ .....-..++.++|..|+.+|-++||++.++++
T Consensus 229 ~DmHP-----mra---LF~IpRN----PPPkL---krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 229 CDMHP-----MRA---LFLIPRN----PPPKL---KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred cCcch-----hhh---hccCCCC----CCccc---cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 54322 111 1111110 01111 123456778999999999999999999988764
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2e-32 Score=290.01 Aligned_cols=231 Identities=26% Similarity=0.330 Sum_probs=184.3
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.+|.|+|+.|-++.+. +++..+||++.+.. .+-.+|+.++.+. +||||+++.+.+.+..+.|+|||++.+|-+.
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell 404 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL 404 (612)
T ss_pred ccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH
Confidence 4999999999998865 48899999998762 2345688787777 6999999999999999999999999999888
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee-CCCCCeEEcccchhhhhhccCCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-GHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl-~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
+.+...+ ... .++..|+.+|+.|+.|||+ +|||||||||+|||+ ++.++++|+|||.++.....
T Consensus 405 ~ri~~~~------~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----- 469 (612)
T KOG0603|consen 405 RRIRSKP------EFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----- 469 (612)
T ss_pred HHHHhcc------hhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----
Confidence 8776542 223 6788899999999999999 999999999999999 68999999999999876432
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
..+..-|..|.|||++....|++++|+||||++||||++|+.||.....+
T Consensus 470 --------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---- 519 (612)
T KOG0603|consen 470 --------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---- 519 (612)
T ss_pred --------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----
Confidence 11122367799999999999999999999999999999999999544333
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+...+ +.. +... ........+++.+||+.||.+||+|.++..
T Consensus 520 ~ei~~~-i~~---------~~~s-----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 520 IEIHTR-IQM---------PKFS-----ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHHHh-hcC---------Cccc-----cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 111111 111 1111 123346789999999999999999999864
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.1e-31 Score=269.12 Aligned_cols=238 Identities=26% Similarity=0.358 Sum_probs=190.2
Q ss_pred CceEEEEEEECC-CcEEEEEEeCCCCchh-HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhhhhhC
Q 005102 415 GIGIVYKVVLED-GHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHG 492 (714)
Q Consensus 415 ~~g~Vy~~~~~~-g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 492 (714)
+||.||+|...+ |+.+|+|++....... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999875 8999999998765444 67899999999999999999999999999999999999999999999875
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCC
Q 005102 493 KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRM 572 (714)
Q Consensus 493 ~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 572 (714)
.. .+++..+..++.++++++.|||+ .+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~------~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---------- 141 (244)
T smart00220 81 RG------RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---------- 141 (244)
T ss_pred cc------CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc----------
Confidence 42 37899999999999999999999 899999999999999999999999999987654221
Q ss_pred CCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHH
Q 005102 573 PAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQL 652 (714)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~ 652 (714)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||.... +.......
T Consensus 142 -------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~ 198 (244)
T smart00220 142 -------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKK 198 (244)
T ss_pred -------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHH
Confidence 1122335677999999988889999999999999999999999984321 11111211
Q ss_pred HHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 653 CIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 653 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
........ ... . .....++.+++.+||..+|++||++.++++
T Consensus 199 ~~~~~~~~---~~~----~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 199 IGKPKPPF---PPP----E---WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HhccCCCC---ccc----c---ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 11111100 000 0 002236889999999999999999999986
No 386
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=248.44 Aligned_cols=208 Identities=24% Similarity=0.300 Sum_probs=165.2
Q ss_pred CHHHHHHhccccccccCceEEEEEEEC-CCcEEEEEEeCCC-CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCcee
Q 005102 399 DLDELLKASAFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKL 475 (714)
Q Consensus 399 ~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 475 (714)
..++|.. ...||+|+||.|-+-++. +|+..|+|+++.. ..+..++..+|+++..+. .+|.+|+++|.+......+
T Consensus 44 ~ad~L~~--i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 44 PADDLVG--IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred chhhhhh--hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 3444443 446999999999888764 5999999999865 344556788899887665 7999999999999999999
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
+.||.|.. ||..+..+--... ..+++.-.-+||..|..||.|||+. ..+||||+||+||||+.+|++|+||||.+
T Consensus 122 IcME~M~t-Sldkfy~~v~~~g--~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRKVLKKG--GTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EeHHHhhh-hHHHHHHHHHhcC--CcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccc
Confidence 99999954 8877654321111 4688899999999999999999995 47999999999999999999999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC----CCCCchhhhHHHHHHHHHHHh
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV----VKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~~DVwS~Gvvl~ellt 631 (714)
-.+.++- ..+...|.-.|||||.+.. ..|+.|+||||+|+++.||.+
T Consensus 197 G~L~dSi-----------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 197 GYLVDSI-----------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred eeehhhh-----------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 7764321 1112234566999999853 358999999999999999999
Q ss_pred CCCccccCCCC
Q 005102 632 GRTAVVQVGSS 642 (714)
Q Consensus 632 G~~p~~~~~~~ 642 (714)
++.||...+..
T Consensus 248 lr~PY~~w~tp 258 (282)
T KOG0984|consen 248 LRFPYESWGTP 258 (282)
T ss_pred ccccccccCCH
Confidence 99999655443
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-32 Score=262.78 Aligned_cols=239 Identities=21% Similarity=0.311 Sum_probs=193.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+||+|+|++|..++++ +.+.+|+|++++. +....+-.+.|-.+..+. +||.+|.++.+|++....++|.||+++
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~g 335 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNG 335 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecC
Confidence 38999999999999975 4788999999874 334455678888888887 699999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.-+++.. ++++++.++-+..+|+-||.|||+ +|||.||||..|||+|..|++||.|+|+++.--.+
T Consensus 336 gdlmfhmqrq------rklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~~-- 404 (593)
T KOG0695|consen 336 GDLMFHMQRQ------RKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP-- 404 (593)
T ss_pred cceeeehhhh------hcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCCC--
Confidence 9998888766 569999999999999999999999 99999999999999999999999999999742111
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC--C
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG--S 641 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~--~ 641 (714)
...+++..||+.|+|||++.+..|+..+|.|++||+++||+.|+.||...+ +
T Consensus 405 --------------------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n 458 (593)
T KOG0695|consen 405 --------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN 458 (593)
T ss_pred --------------------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC
Confidence 335567889999999999999999999999999999999999999995433 2
Q ss_pred CcchhHHHHHHHHhh-cCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 642 SEMDLVNWMQLCIEE-KKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
.++.-..++-..+-+ ...++. . ...+...+++.-+.+||.+|.
T Consensus 459 ~d~ntedylfqvilekqiripr--------s-----lsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 459 PDMNTEDYLFQVILEKQIRIPR--------S-----LSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred cccchhHHHHHHHhhhcccccc--------e-----eehhhHHHHHHhhcCCcHHhc
Confidence 333333333332222 211111 1 122455788889999999985
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.2e-30 Score=285.30 Aligned_cols=255 Identities=21% Similarity=0.293 Sum_probs=173.4
Q ss_pred cccccccCceEEEEEEE-----------------CCCcEEEEEEeCCCCchhHHH--------------HHHHHHHHhcc
Q 005102 408 AFVLGKSGIGIVYKVVL-----------------EDGHTLAVRRLGEGGSQRFKE--------------FQTEVEAIGKI 456 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~~--------------~~~E~~~l~~l 456 (714)
.++||+|+||.||+|.+ .+++.||||++........++ +..|+..+.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 35899999999999964 235789999987643332233 34477777777
Q ss_pred CCCCc-----cceEEEEEe--------CCceeEEEeccCCCCHhhhhhCCCCC------------------CCcCCCCHH
Q 005102 457 RHSNI-----VTLRAYYWS--------VDEKLLIYDYIPNGSLATALHGKPGM------------------VSFTPVPWS 505 (714)
Q Consensus 457 ~H~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~ 505 (714)
+|.++ +++++||.. .+..++||||+++|+|.++++...+. .....++|.
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~ 309 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN 309 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH
Confidence 66554 677887753 35679999999999999999753210 011245788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccc
Q 005102 506 VRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585 (714)
Q Consensus 506 ~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (714)
.+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 310 ~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------------- 363 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------------- 363 (507)
T ss_pred HHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------------
Confidence 899999999999999999 899999999999999999999999999986542110
Q ss_pred cceeecccCCCCCCccccCCcccCCCCC----------------------CchhhhHHHHHHHHHHHhCCC-ccccCCCC
Q 005102 586 SLEVTTTNSSSNLGSYYQAPESLKVVKP----------------------SQKWDIYSYGVILLEMITGRT-AVVQVGSS 642 (714)
Q Consensus 586 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~----------------------s~~~DVwS~Gvvl~elltG~~-p~~~~~~~ 642 (714)
........+|+.|+|||.+..... ..+.||||+||++|||++|.. ||......
T Consensus 364 ----~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f 439 (507)
T PLN03224 364 ----NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLF 439 (507)
T ss_pred ----ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhh
Confidence 001111223678999999854321 124799999999999999875 66321111
Q ss_pred c-------chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCC---CCCCCHHHHHH
Q 005102 643 E-------MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSP---EKRPTMRHISD 704 (714)
Q Consensus 643 ~-------~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP---~~RPt~~evl~ 704 (714)
. .++..|.. .... ..+-.. .........+++.+++..+| .+|+|++|+++
T Consensus 440 ~~~~~~~~~~~~~~r~--~~~~-----~~~~~~-----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 440 NTELRQYDNDLNRWRM--YKGQ-----KYDFSL-----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred hhHHhhccchHHHHHh--hccc-----CCCccc-----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 1 11111111 0000 001000 01123357789999999766 68999999875
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-32 Score=278.33 Aligned_cols=244 Identities=21% Similarity=0.272 Sum_probs=195.2
Q ss_pred CHHHHHHhccccccccCceEEEEEEECCCc-EEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCce
Q 005102 399 DLDELLKASAFVLGKSGIGIVYKVVLEDGH-TLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK 474 (714)
Q Consensus 399 ~~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (714)
.+.++... -.||-|+||.|=.+..+... .+|+|.+++. +....+....|-++|...+.|.||++|-.|.+....
T Consensus 418 ~l~dl~~i--aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 418 KLSDLKRI--ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred chhhhhhh--hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 34444442 25999999999999876533 4888888764 334445678899999999999999999999999999
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
|++||-|-||.|+..|.++ ..++..+.+-++..+.+|++|||+ ++||.|||||+|.++|.+|-+||.|||+
T Consensus 496 YmLmEaClGGElWTiLrdR------g~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR------GSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhHHhhcCchhhhhhhhc------CCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhh
Confidence 9999999999999999877 458888899999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
|+.+... ..+.+..||+.|.|||++.....+.++|.||+|+++|||+||++
T Consensus 567 AKki~~g-----------------------------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p 617 (732)
T KOG0614|consen 567 AKKIGSG-----------------------------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP 617 (732)
T ss_pred HHHhccC-----------------------------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC
Confidence 9987542 34567789999999999999999999999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
||... +.+...+ ..++.-. .+-=| ........+++++....+|.+|..
T Consensus 618 PFs~~--dpmktYn---~ILkGid---~i~~P--------r~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 618 PFSGV--DPMKTYN---LILKGID---KIEFP--------RRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred CCCCC--chHHHHH---HHHhhhh---hhhcc--------cccchhHHHHHHHHHhcCcHhhhc
Confidence 99432 2222222 2222210 00001 112234668888999999999965
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.8e-31 Score=294.82 Aligned_cols=257 Identities=20% Similarity=0.244 Sum_probs=161.0
Q ss_pred cccccccCceEEEEEEECC-----CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEE------EEeCCceeE
Q 005102 408 AFVLGKSGIGIVYKVVLED-----GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAY------YWSVDEKLL 476 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~~~~~~~~l 476 (714)
.+.||+|+||.||+|++.+ +..||||++...... +.+..| .+.+..+.+++.++.. +......++
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 212 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWL 212 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEE
Confidence 3589999999999999854 689999998654322 111111 1122222222222211 234567899
Q ss_pred EEeccCCCCHhhhhhCCCCCCC--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC
Q 005102 477 IYDYIPNGSLATALHGKPGMVS--------------FTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~--------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~ 542 (714)
||||+.+++|.+++........ ........+..|+.|++.||+|||+ ++|+||||||+|||++
T Consensus 213 V~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 213 VWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQNIIFS 289 (566)
T ss_pred EEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHHEEEe
Confidence 9999999999999875421000 0011234466899999999999999 8999999999999998
Q ss_pred C-CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC----------
Q 005102 543 H-NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV---------- 611 (714)
Q Consensus 543 ~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---------- 611 (714)
+ ++.+||+|||+|+.+.... ........+|+.|+|||.+...
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~~---------------------------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~ 342 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVGI---------------------------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAP 342 (566)
T ss_pred CCCCcEEEEeCCCcccccccc---------------------------ccCCcccccCCCccChHHhhccCCCCCCcccc
Confidence 6 5799999999998653211 0111234567889999965322
Q ss_pred ------------CCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcc---cccCCCCCCC----C
Q 005102 612 ------------KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLA---DVLDPYLAPD----A 672 (714)
Q Consensus 612 ------------~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~d~~~~~~----~ 672 (714)
.++.++|||||||++|||+++..++. .++..+............ ....+....+ .
T Consensus 343 ~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (566)
T PLN03225 343 VATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD------SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGF 416 (566)
T ss_pred ccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc------hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhh
Confidence 23456799999999999999766542 112221111111111000 0111110000 0
Q ss_pred C-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 673 D-KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 673 ~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .........+|+.+||+.||++|||++|+++
T Consensus 417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred hhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence 0 0001123568999999999999999999976
No 391
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=1.7e-30 Score=314.96 Aligned_cols=228 Identities=41% Similarity=0.683 Sum_probs=167.7
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCcccceEec-CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCC
Q 005102 20 SLNGEGYALLSFKQSVHEDPEGSLSNWNSSDENPCSWNGITCK-EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNN 98 (714)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~-~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N 98 (714)
..+.|+.||++||+++ .+|.+.+.+|+.. .++|.|.||+|+ ..+|+.|+|++|+++|.+|+.|..+++|+.|+|++|
T Consensus 26 ~~~~~~~~l~~~~~~~-~~~~~~~~~w~~~-~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 26 LHAEELELLLSFKSSI-NDPLKYLSNWNSS-ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CCHHHHHHHHHHHHhC-CCCcccCCCCCCC-CCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 3568999999999998 4787889999754 578999999997 569999999999999999999999999999999999
Q ss_pred CCcccCChhhc-CCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCC
Q 005102 99 KFFGSLPLELL-EAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLP 177 (714)
Q Consensus 99 ~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 177 (714)
+++|.+|..+. .+++|++|+|++|.++|.+|. +.+++|+.|+|++|.+++.+|..+.++++|++|+|++|.+.+.+|
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 181 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIP 181 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCC
Confidence 99999998866 788888888888888776664 345666666666666666666666666666666666666666666
Q ss_pred cccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 178 NGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 178 ~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
..+. ++++|++|+|++|++++.+|..++++++|+ .|++++|++++.+|..++.+++|+.|++++|++++.+|..
T Consensus 182 ~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~-~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 255 (968)
T PLN00113 182 NSLT-NLTSLEFLTLASNQLVGQIPRELGQMKSLK-WIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255 (968)
T ss_pred hhhh-hCcCCCeeeccCCCCcCcCChHHcCcCCcc-EEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChh
Confidence 5553 356666666666666666666666666665 6666666666666666666666666666666665555543
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5e-31 Score=275.27 Aligned_cols=223 Identities=22% Similarity=0.292 Sum_probs=175.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchh---HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQR---FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
..||-|.||+|.++...| ...+|+|.+++.+.-. ......|-+||...+.+-||++|-.|.+.+.+|+||||++||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 459999999999998655 6789999998764332 235678999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
|+..+|... .-+.+..++-++.++..|+++.|. .|+|||||||+|||||.+|++||.||||+.-+.....+
T Consensus 715 DmMSLLIrm------gIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 715 DMMSLLIRM------GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred cHHHHHHHh------ccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceecccc
Confidence 999999766 458888999999999999999999 89999999999999999999999999999755433322
Q ss_pred CCccCCCCCCC---Cchhh-----------hcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHH
Q 005102 565 PTLQSNRMPAE---KPQER-----------QQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630 (714)
Q Consensus 565 ~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ell 630 (714)
..++....... .+... ..+.....-.......+||+.|+|||++....++..+|.||.|||||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 22221111100 00000 00000001122334678999999999999999999999999999999999
Q ss_pred hCCCccccCC
Q 005102 631 TGRTAVVQVG 640 (714)
Q Consensus 631 tG~~p~~~~~ 640 (714)
.|+.||....
T Consensus 866 ~g~~pf~~~t 875 (1034)
T KOG0608|consen 866 VGQPPFLADT 875 (1034)
T ss_pred hCCCCccCCC
Confidence 9999995443
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=286.68 Aligned_cols=245 Identities=24% Similarity=0.323 Sum_probs=184.7
Q ss_pred cccccccCce-EEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIG-IVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+++|.|..| .||+|.++ |+.||||++-.... .-.++||..|+.- +|||||++++.-.+.+..|+..|.|. .+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~~---~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~s 588 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLEEFF---DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CS 588 (903)
T ss_pred HHHcccCCCCcEEEEEeeC-CceehHHHHhhHhH---HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hh
Confidence 3578999887 68999995 89999999865432 3567899999988 59999999988888899999999995 59
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---C--CCeEEcccchhhhhhc
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---N--MEPHVSDFGLARLANI 560 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~--~~~kl~DFGla~~~~~ 560 (714)
|.+++....... ....-...+.+..|++.||+|||+ .+||||||||.||||+. + ..++|+|||+++.+..
T Consensus 589 L~dlie~~~~d~--~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 589 LQDLIESSGLDV--EMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HHHHHhccccch--hhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999998751111 111113457789999999999999 89999999999999975 3 5789999999997754
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhC-CCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG-RTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG-~~p~~~~ 639 (714)
...+ -.......||.+|+|||++....-+.++||||+|||+|..++| ..||-+.
T Consensus 664 ~~sS-------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~ 718 (903)
T KOG1027|consen 664 GKSS-------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS 718 (903)
T ss_pred Ccch-------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch
Confidence 3221 1124566789999999999988888999999999999999995 8999332
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+.. ++.....+..+ .+. .++ +..++|.+|++++|..||++.+|+.
T Consensus 719 ~~R~~N-------Il~~~~~L~~L-----~~~---~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 719 LERQAN-------ILTGNYTLVHL-----EPL---PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred HHhhhh-------hhcCccceeee-----ccC---chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 211111 11122111111 111 111 5679999999999999999999973
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.8e-30 Score=240.56 Aligned_cols=251 Identities=18% Similarity=0.250 Sum_probs=192.6
Q ss_pred cccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCC--ceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVD--EKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~lV~e~~~~gs 485 (714)
.+|+|.|++||.|.. .+.+.++||+++... .+.+.+|+.+|..++ ||||+++++...+.. ...+|+||+.+.+
T Consensus 45 k~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~D 121 (338)
T KOG0668|consen 45 KVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTD 121 (338)
T ss_pred HHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcccc
Confidence 699999999999984 457889999997643 356889999999997 999999999998754 4579999999988
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~~~ 564 (714)
...+. ..++-..++.++.+++.||.|+|+ .||+|||+||.|++||.. -.++|+|+|+|-++.....
T Consensus 122 fk~ly---------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e- 188 (338)
T KOG0668|consen 122 FKQLY---------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE- 188 (338)
T ss_pred HHHHh---------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCCce-
Confidence 87765 457788899999999999999999 999999999999999864 5689999999998764321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
-...+.+++|.-||.+.. ..|+..-|+|||||++..|+..+.||+....+.
T Consensus 189 ----------------------------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~ 240 (338)
T KOG0668|consen 189 ----------------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 240 (338)
T ss_pred ----------------------------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH
Confidence 112234677999999965 458999999999999999999999998777776
Q ss_pred chhHHHHHHHHhhc-----CCcccccCCCCCC--------C-------CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 644 MDLVNWMQLCIEEK-----KPLADVLDPYLAP--------D-------ADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 644 ~~l~~~~~~~~~~~-----~~~~~~~d~~~~~--------~-------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
..++..++..-.+. ....-.+||.... . ....-...+.++++.+.|..|-.+|+|++|.+
T Consensus 241 DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 241 DQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred HHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 66666543211110 0000012221110 0 00111224678999999999999999999986
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
.
T Consensus 321 ~ 321 (338)
T KOG0668|consen 321 A 321 (338)
T ss_pred c
Confidence 4
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.6e-31 Score=249.21 Aligned_cols=192 Identities=24% Similarity=0.403 Sum_probs=159.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~ 480 (714)
+.||.|.||.||.+.++ +|+.||.|++... +-...+++.+|++.|..++|.|++..++...-. ++.|+|+|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 46999999999999974 6999999998753 333457899999999999999999998887643 356899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
|.. +|..++-.. +.++...++-+..||++||+|||+ .+|.||||||.|.|++.+..+||+|||+|+.-+.
T Consensus 139 mQS-DLHKIIVSP------Q~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 139 MQS-DLHKIIVSP------QALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHh-hhhheeccC------CCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccch
Confidence 955 888877654 568888899999999999999999 8999999999999999999999999999986543
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
.+ .+.++-+ +-|-+|+|||.+.|.+ |+.+.||||.|||+.|++.++-.|.
T Consensus 209 d~-------------------~~hMTqE--------VVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 209 RD-------------------RLNMTHE--------VVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred hh-------------------hhhhHHH--------HHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 21 1111111 2266799999998865 8999999999999999998888773
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=4.7e-29 Score=242.79 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=182.1
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEec
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYDY 480 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e~ 480 (714)
.+|.|.- .|..+.+. .++.||+|++... .....++..+|...+..++|+||++++.+|.-. .+.|+||||
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~ 102 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMEL 102 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHh
Confidence 4666665 45545432 4889999998654 233446788999999999999999999998643 356999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
|. ++|...++. .++-.+...|..|++.|++|||+ .+|+||||||+||++..+..+||.|||+|+..+.
T Consensus 103 m~-~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 103 MD-ANLCQVILM--------ELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred hh-hHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhcccCc
Confidence 95 599988872 36778899999999999999999 9999999999999999999999999999985321
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
. ...+..+.|++|+|||++.+..+.+.+||||.||++.||++|+-.|.
T Consensus 171 ~-----------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~--- 218 (369)
T KOG0665|consen 171 D-----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP--- 218 (369)
T ss_pred c-----------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec---
Confidence 1 12334456889999999999889999999999999999999998884
Q ss_pred CCcchhHHHHHHHHhhcC--------------------------Cccccc-CCCCCCCCC-cHHHHHHHHHHHhHccCCC
Q 005102 641 SSEMDLVNWMQLCIEEKK--------------------------PLADVL-DPYLAPDAD-KEEEIIAVLKIAMACVHSS 692 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~--------------------------~~~~~~-d~~~~~~~~-~~~~~~~l~~li~~Cl~~d 692 (714)
....+.+|-+....-+. .+.+.+ |........ .........+++.+||..|
T Consensus 219 -g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~ 297 (369)
T KOG0665|consen 219 -GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID 297 (369)
T ss_pred -CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence 12222333221111000 000000 111111100 1123345678999999999
Q ss_pred CCCCCCHHHHHH
Q 005102 693 PEKRPTMRHISD 704 (714)
Q Consensus 693 P~~RPt~~evl~ 704 (714)
|++|.+++++++
T Consensus 298 pe~Risv~daL~ 309 (369)
T KOG0665|consen 298 PEKRISVDDALR 309 (369)
T ss_pred hhhcccHHHHhc
Confidence 999999999875
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=6.7e-28 Score=237.49 Aligned_cols=210 Identities=32% Similarity=0.480 Sum_probs=180.5
Q ss_pred ccccCceEEEEEEECC-CcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 411 LGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++|+++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999865 899999999876442 34678999999999999999999999999899999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhhhhccCCCCCc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
++.... ..+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+........
T Consensus 81 ~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 81 LLKENE-----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred HHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 987542 247899999999999999999999 89999999999999999 89999999999875532210
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
......+...|++||..... .++.++|+|++|+++++|
T Consensus 149 ------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------- 187 (215)
T cd00180 149 ------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------- 187 (215)
T ss_pred ------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------
Confidence 01112345679999999877 788999999999999999
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..+.+++.+|++.||++||+++++++.
T Consensus 188 --------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 257789999999999999999999864
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=262.21 Aligned_cols=190 Identities=20% Similarity=0.253 Sum_probs=165.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCch--------hHHHHHHHHHHHhccC---CCCccceEEEEEeCCceeE
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQ--------RFKEFQTEVEAIGKIR---HSNIVTLRAYYWSVDEKLL 476 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~l 476 (714)
..+|+|+||.|+.|.++. ...|+||.+.+...- ..-..-.||+||..++ |+||++++++|++++..|+
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl 646 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL 646 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence 579999999999999865 678999998774211 1123556999999997 9999999999999999999
Q ss_pred EEecc-CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 477 IYDYI-PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 477 V~e~~-~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
+||-- ++-+|++++..+ ..+++.++..|++||+.|+++||+ .+|||||||-+||.+|.+|-+||+|||.|
T Consensus 647 ~te~hg~gIDLFd~IE~k------p~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 647 ETEVHGEGIDLFDFIEFK------PRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred EecCCCCCcchhhhhhcc------CccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeeccch
Confidence 99854 567999999877 568999999999999999999999 89999999999999999999999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~ 634 (714)
.+.. .......+||.+|.|||++.|.+| +..-|||++|++||.++....
T Consensus 718 a~~k------------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken 767 (772)
T KOG1152|consen 718 AYTK------------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN 767 (772)
T ss_pred hhhc------------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence 7653 234456788999999999999887 667899999999999999999
Q ss_pred ccc
Q 005102 635 AVV 637 (714)
Q Consensus 635 p~~ 637 (714)
||+
T Consensus 768 pyy 770 (772)
T KOG1152|consen 768 PYY 770 (772)
T ss_pred CCc
Confidence 985
No 399
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-28 Score=249.75 Aligned_cols=126 Identities=20% Similarity=0.276 Sum_probs=107.2
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccC-----C---CCccceEEEEEe----CCcee
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-----H---SNIVTLRAYYWS----VDEKL 475 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~----~~~~~ 475 (714)
..||-|.|++||++++.. .+.||+|+.+... ...+....||++|++++ | .+||+++++|.. +.+.|
T Consensus 84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVC 162 (590)
T KOG1290|consen 84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVC 162 (590)
T ss_pred EeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEE
Confidence 479999999999999754 6789999887543 33467789999999994 3 379999999985 45889
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~ 542 (714)
||+|++ |-+|..++..... +.++...+++|++||+.||.|||+. .+|||-||||+|||+.
T Consensus 163 MVfEvL-GdnLLklI~~s~Y----rGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 163 MVFEVL-GDNLLKLIKYSNY----RGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLC 222 (590)
T ss_pred EEehhh-hhHHHHHHHHhCC----CCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeee
Confidence 999999 6699999987654 5699999999999999999999996 4899999999999993
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=1.7e-29 Score=258.89 Aligned_cols=267 Identities=18% Similarity=0.221 Sum_probs=197.5
Q ss_pred cCHHHHHHhcc---ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccC------CCCccceEEE
Q 005102 398 FDLDELLKASA---FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR------HSNIVTLRAY 467 (714)
Q Consensus 398 ~~~~~l~~~~~---~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~ 467 (714)
..+.|++..-. -..|+|-|++|.+|.... |+.||||+++..... .+.=.+|+++|++|+ --|+++++-.
T Consensus 424 v~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 424 VRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred EehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 34445444322 347899999999999765 889999999876433 355678999999995 3489999999
Q ss_pred EEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CC
Q 005102 468 YWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-ME 546 (714)
Q Consensus 468 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~ 546 (714)
|...+++|||+|-+ .-+|.+.|+.-... -.|....+..++.|+.-||..|-. .+|+|.||||.|||+++. ..
T Consensus 503 F~hknHLClVFE~L-slNLRevLKKyG~n---vGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPL-SLNLREVLKKYGRN---VGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNI 575 (752)
T ss_pred hhhcceeEEEehhh-hchHHHHHHHhCcc---cceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcce
Confidence 99999999999988 45999999865432 357788999999999999999999 799999999999999875 56
Q ss_pred eEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHH
Q 005102 547 PHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVIL 626 (714)
Q Consensus 547 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl 626 (714)
+||||||.|.+....+.. ...-+.+|+|||++.|.+|+...|+||.||+|
T Consensus 576 LKLCDfGSA~~~~eneit------------------------------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctL 625 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEIT------------------------------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTL 625 (752)
T ss_pred eeeccCcccccccccccc------------------------------HHHHHHhccCcceeecCcccCCccceeeceee
Confidence 899999999876543211 11125679999999999999999999999999
Q ss_pred HHHHhCCCccccCCCCcchhHHHHHHH--------HhhcCCcccccCCC----------------------CCC------
Q 005102 627 LEMITGRTAVVQVGSSEMDLVNWMQLC--------IEEKKPLADVLDPY----------------------LAP------ 670 (714)
Q Consensus 627 ~elltG~~p~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~d~~----------------------~~~------ 670 (714)
|||.||+..|+...++. +..++..+ +..+.-..+-+|.. ..+
T Consensus 626 YElYtGkIlFpG~TNN~--MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s 703 (752)
T KOG0670|consen 626 YELYTGKILFPGRTNNQ--MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGS 703 (752)
T ss_pred EEeeccceecCCCCcHH--HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHH
Confidence 99999999996544433 22222111 11000000000000 001
Q ss_pred --------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 671 --------DADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 671 --------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.........++.+|+..|+..||++|.|..+++.
T Consensus 704 ~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 704 ELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 0112245667899999999999999999998764
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-29 Score=265.96 Aligned_cols=245 Identities=23% Similarity=0.317 Sum_probs=196.0
Q ss_pred cccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.+|.|+||.|||+++. .++..|||+++..-.....-.++|+-+++..+|||||.++|-|...+..++.|||+.+|+|.+
T Consensus 22 rvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQd 101 (829)
T KOG0576|consen 22 RVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQD 101 (829)
T ss_pred eecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccc
Confidence 6999999999999975 589999999988766666778899999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
..+.. .++++.++..+++..++||+|||+ .+-+|||||-.|||+++.+.+|++|||.+-.+...
T Consensus 102 iy~~T------gplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitat------- 165 (829)
T KOG0576|consen 102 IYHVT------GPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT------- 165 (829)
T ss_pred eeeec------ccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhh-------
Confidence 88766 568899999999999999999999 89999999999999999999999999988654311
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc---CCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL---KVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......+.||++|||||+. ..+.|..++|||+.|++..|+-.-.+|.++..
T Consensus 166 ---------------------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh----- 219 (829)
T KOG0576|consen 166 ---------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH----- 219 (829)
T ss_pred ---------------------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-----
Confidence 2234466789999999998 34568999999999999999988777753211
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
-.+.....-+.... .|.+... ..-...+.++++.|+-++|.+|||++.++.
T Consensus 220 pmr~l~LmTkS~~q-----pp~lkDk---~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 220 PMRALFLMTKSGFQ-----PPTLKDK---TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred hHHHHHHhhccCCC-----CCcccCC---ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11111111111111 1112111 123346889999999999999999987654
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-28 Score=232.33 Aligned_cols=254 Identities=18% Similarity=0.304 Sum_probs=185.4
Q ss_pred cCHHHHHHhccccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEE-EEeCCce
Q 005102 398 FDLDELLKASAFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAY-YWSVDEK 474 (714)
Q Consensus 398 ~~~~~l~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~-~~~~~~~ 474 (714)
++++|... ..+.+|+|.||.+-.++++. .+.+|+|-+..... ..++|.+|..---.+ .|.||+.-|+. |++.+..
T Consensus 20 v~l~d~y~-I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 20 VDLEDVYT-INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred cchhhhhh-HHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 34444433 23479999999999999876 67888888876533 357899998876666 58999988775 5566777
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee-C-CCCCeEEccc
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-G-HNMEPHVSDF 552 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl-~-~~~~~kl~DF 552 (714)
.+++||++.|||.+-+... .+.+...++++.|++.|+.|||+ ..+||||||.+|||| + +...+||+||
T Consensus 98 vF~qE~aP~gdL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeec
Confidence 8999999999999988653 36778899999999999999999 999999999999999 3 3458999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-----CCCchhhhHHHHHHHH
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-----KPSQKWDIYSYGVILL 627 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DVwS~Gvvl~ 627 (714)
|+.+..+.. ......+-.|.|||..... ...+.+|||.||+++|
T Consensus 168 G~t~k~g~t-------------------------------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f 216 (378)
T KOG1345|consen 168 GLTRKVGTT-------------------------------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFF 216 (378)
T ss_pred ccccccCce-------------------------------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeee
Confidence 998754211 1111124459999987532 3578899999999999
Q ss_pred HHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 628 EMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 628 elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.++||+.||......+....+|++-.-+....+++.+.+ + ...+.++.++-+..+|++|=...++.+
T Consensus 217 ~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~-----f-----s~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 217 YCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNP-----F-----SEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred eeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcc-----c-----CHHHHHHHHHhcCCcccccchhHHHHH
Confidence 999999999655555566666665433222222222211 1 224667777888999999944444443
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1.6e-28 Score=248.11 Aligned_cols=283 Identities=19% Similarity=0.279 Sum_probs=198.0
Q ss_pred cccccccCceEEEEEEEC----CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+|++||++.+. ..+.||+|.+...+.. .....|++.|..+. +.||+++.+++..++...+|+||++
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~ 118 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFE 118 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccC
Confidence 357999999999999854 3678999999876544 46889999999994 9999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhcc
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANIA 561 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~ 561 (714)
.-+..+++. .++..++..+++.+..||+|+|. .|||||||||+|+|.+.. +.-.|.|||+|...+..
T Consensus 119 H~~f~~l~~---------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 119 HDRFRDLYR---------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred ccCHHHHHh---------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 998888873 47788999999999999999999 999999999999999754 56789999999843321
Q ss_pred CCCCCccC----CCCC-CC------C-----chhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHH
Q 005102 562 GGSPTLQS----NRMP-AE------K-----PQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGV 624 (714)
Q Consensus 562 ~~~~~~~~----~~~~-~~------~-----~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gv 624 (714)
........ ...+ .+ . .....................||+||+|||++.. ...++++||||.||
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV 266 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV 266 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence 10000000 0000 00 0 0000000001222334457789999999999965 44689999999999
Q ss_pred HHHHHHhCCCccccCCCCcchhHHHHHH--------HHh-hcC-Cccc---------c------cC-CCCCCCCC-----
Q 005102 625 ILLEMITGRTAVVQVGSSEMDLVNWMQL--------CIE-EKK-PLAD---------V------LD-PYLAPDAD----- 673 (714)
Q Consensus 625 vl~elltG~~p~~~~~~~~~~l~~~~~~--------~~~-~~~-~~~~---------~------~d-~~~~~~~~----- 673 (714)
|++-+++++.||.....+-..+.+.+.. +.. .+. .+.+ . ++ ..+....+
T Consensus 267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~ 346 (418)
T KOG1167|consen 267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER 346 (418)
T ss_pred eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence 9999999999997766555444443211 000 000 0000 0 00 00000000
Q ss_pred ---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 674 ---KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 674 ---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.....+++++.+|++.||.+|.|+++.++
T Consensus 347 ~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 347 EIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0111225789999999999999999999874
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.1e-26 Score=232.13 Aligned_cols=194 Identities=31% Similarity=0.439 Sum_probs=166.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||+++++|
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 84 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDL 84 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCH
Confidence 478999999999999876 899999999876554 567899999999999999999999999998999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++..... .+++..+..++.+++.++.|||+ .+++|+|++|+||+++.++.++|+|||.+........
T Consensus 85 ~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--- 153 (225)
T smart00221 85 FDYLRKKGG-----KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--- 153 (225)
T ss_pred HHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc---
Confidence 999976521 17899999999999999999999 8999999999999999999999999999876542210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc-CCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
.......++..|++||.+ ....++.++|||+||++++||++|+.||.
T Consensus 154 ------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 154 ------------------------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ------------------------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 011122345679999998 66678889999999999999999999994
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=8.1e-26 Score=217.22 Aligned_cols=169 Identities=21% Similarity=0.233 Sum_probs=126.0
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.++++... ..++|.++..|+.|++.||+|||+ .+ ||+|||+++++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRG-----RPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc--
Confidence 68999997542 459999999999999999999999 55 999999999999999 9998754311
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
...||+.|||||++.+..++.++|||||||++|||+||+.||.......
T Consensus 63 -------------------------------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~ 111 (176)
T smart00750 63 -------------------------------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS 111 (176)
T ss_pred -------------------------------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc
Confidence 1136788999999999999999999999999999999999994332211
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHH--HHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI--IAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
. ........... .++... ....... .++.+++.+||..||++|||+.|+++.+..+..
T Consensus 112 ~----~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 112 A----ILEILLNGMPA----DDPRDR--SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred H----HHHHHHHHhcc----CCcccc--ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 1 12111111111 001000 0111122 258899999999999999999999998877643
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=2.1e-26 Score=271.73 Aligned_cols=223 Identities=15% Similarity=0.134 Sum_probs=141.2
Q ss_pred hccCC-CCccceEEEEE-------eCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005102 454 GKIRH-SNIVTLRAYYW-------SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525 (714)
Q Consensus 454 ~~l~H-~niv~l~~~~~-------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 525 (714)
+.++| +||++++++|. ..+..+.+|||+ +++|.+++.... ..+++.+++.|+.||++||+|||+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~-- 98 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHS-- 98 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHh--
Confidence 34556 68888888872 234567788988 569999997542 458999999999999999999999
Q ss_pred CCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC-CccC---CCCCCCCc---hhhhcccccceeecccCCCCC
Q 005102 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP-TLQS---NRMPAEKP---QERQQKSVSLEVTTTNSSSNL 598 (714)
Q Consensus 526 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g 598 (714)
++|+||||||+|||++..+.+|++|||+++......... .... .+...... ....................|
T Consensus 99 -~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (793)
T PLN00181 99 -QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME 177 (793)
T ss_pred -CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence 899999999999999766666666665554321110000 0000 00000000 000000000000111123457
Q ss_pred CccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHH
Q 005102 599 GSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEI 678 (714)
Q Consensus 599 t~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 678 (714)
|++|||||++.+..++.++|||||||+||||++|..|+.... ..+...... ...+... ...
T Consensus 178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-------~~~~~~~~~------~~~~~~~------~~~ 238 (793)
T PLN00181 178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-------RTMSSLRHR------VLPPQIL------LNW 238 (793)
T ss_pred CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-------HHHHHHHHh------hcChhhh------hcC
Confidence 999999999999999999999999999999999988873210 111111000 0111110 112
Q ss_pred HHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 679 IAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 679 ~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+++.+||++||.+||||.|+++
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhh
Confidence 24567888999999999999999975
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.3e-26 Score=215.94 Aligned_cols=246 Identities=21% Similarity=0.368 Sum_probs=187.0
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.|.+...|+.|+|+++ |..+++|++..... ...++|..|.-.|+-+.||||..++|.|....+..++..||+.|+|+
T Consensus 197 kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly 275 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY 275 (448)
T ss_pred hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence 5788899999999996 66777888765432 22367999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
..|++..+. -.+-.++++++.++|+|++|||+..| -|.---|.+..|++|++.+++|+= +-+++.-
T Consensus 276 nvlhe~t~v----vvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarism-ad~kfsf-------- 341 (448)
T KOG0195|consen 276 NVLHEQTSV----VVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISM-ADTKFSF-------- 341 (448)
T ss_pred HHHhcCccE----EEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheec-ccceeee--------
Confidence 999987543 36678899999999999999999754 344557889999999999988741 1111110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCC---chhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPS---QKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s---~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........+.||+||.++..+.+ .++|+|||.+++||+.|+..||.+.+.-+.
T Consensus 342 ------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec 397 (448)
T KOG0195|consen 342 ------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC 397 (448)
T ss_pred ------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh
Confidence 11111225679999999876543 478999999999999999999965543322
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.. +. ..+-+.+.+++.. ...+.++|.-|+..||.+||.+..|+-.||++.
T Consensus 398 gm----ki-------aleglrv~ippgi-----s~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 398 GM----KI-------ALEGLRVHIPPGI-----SRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hh----hh-------hhccccccCCCCc-----cHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11 11 1122233343332 235788999999999999999999999999875
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=3.7e-23 Score=217.22 Aligned_cols=133 Identities=24% Similarity=0.238 Sum_probs=107.6
Q ss_pred ccccccCceEEEEEEEC--CCcEEEEEEeCCC-----CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE--DGHTLAVRRLGEG-----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||+||+|.++ +++.||||++... .....+.|.+|+++|++++|+|+++.+.. .+..++||||+
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~~ 100 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGWT 100 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEcc
Confidence 47999999999999875 4778899987543 12234569999999999999999863322 25689999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC-CCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDL-KPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
++++|... . . .. ...++.++++||+|||+ ++|+|||| ||+|||++.++.+||+|||+|+.+..
T Consensus 101 ~G~~L~~~-~-~--------~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 101 EGVPLHLA-R-P--------HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred CCCCHHHh-C-c--------cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 99999632 1 1 00 14678899999999999 89999999 99999999999999999999997653
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=4.3e-21 Score=202.41 Aligned_cols=265 Identities=19% Similarity=0.205 Sum_probs=189.6
Q ss_pred ccccccCceEEEEEEECCC--cEEEEEEeCCCCchhHHHHHHHHHHHhccCC----CCccceEEEE-EeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLEDG--HTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH----SNIVTLRAYY-WSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~lV~e~~ 481 (714)
..||+|+||.||.|..... ..+|+|............+..|+.++..+.+ +++..+++.. ......++||+.+
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~ 103 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL 103 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc
Confidence 4799999999999997653 4788887766433322367889999998873 6899999998 4777889999988
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-----CCeEEcccchhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-----MEPHVSDFGLAR 556 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-----~~~kl~DFGla~ 556 (714)
+-+|.++...... ..++..+..+|+.|++.+|++||+ .|++||||||+|+++... ..+.|.|||+|+
T Consensus 104 -G~sL~dl~~~~~~----~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 104 -GPSLEDLRKRNPP----GRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred -CccHHHHHHhCCC----CCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7799998765542 569999999999999999999999 999999999999999765 468999999998
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
........... .+. .........||..|.++....+...+.+.|+||++.++.|+..|..||
T Consensus 176 ~~~~~~~~~~~--~~~----------------~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW 237 (322)
T KOG1164|consen 176 RFKYVGDSGGN--LRP----------------PRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW 237 (322)
T ss_pred cccccCCCCcc--ccc----------------CCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence 43221111000 000 011123456899999999999999999999999999999999999998
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
........ .....+..... .... .. . .. ...+.++...+-..+..++|....+...|+.....
T Consensus 238 ~~~~~~~~-~~~~~~~~~~~------~~~~-~~-~-~~---~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 238 EALEMTDL-KSKFEKDPRKL------LTDR-FG-D-LK---PEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred ccccccch-HHHHHHHhhhh------cccc-cc-C-CC---hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 43322111 11111111111 0110 11 1 11 12345555555568999999999999998887554
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.2e-20 Score=199.35 Aligned_cols=262 Identities=27% Similarity=0.359 Sum_probs=191.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCch---hHHHHHHHHHHHhccCCC-CccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ---RFKEFQTEVEAIGKIRHS-NIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
..||.|+|+.||++... ..+++|.+...... ....|.+|+.+++.+.|+ +|+++.+++......+++++|+.++
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGG 83 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCC
Confidence 46899999999999987 88999999875333 357899999999999988 7999999997777789999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhccCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANIAGG 563 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 563 (714)
++.+++...... ..++......++.|++.++.|+|+ .+++|||+||+||+++... .++++|||.++.......
T Consensus 84 ~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 84 SLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred cHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 999777654211 257889999999999999999999 8999999999999999988 799999999985432211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.... ........||..|+|||.+.+ ..++...|+||+|++++++++|..||....
T Consensus 158 ~~~~----------------------~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~ 215 (384)
T COG0515 158 TSSI----------------------PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK 215 (384)
T ss_pred cccc----------------------cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 0000 012344567889999999987 578999999999999999999999974332
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
.. ...............+ ........... ......+.+++..|+..+|..|.++.+....
T Consensus 216 ~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 216 NS-SATSQTLKIILELPTP---SLASPLSPSNP-ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cc-ccHHHHHHHHHhcCCc---ccccccCcccc-chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 21 0011111111111111 00000000000 1123467789999999999999998876653
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.8e-22 Score=226.01 Aligned_cols=255 Identities=20% Similarity=0.210 Sum_probs=182.5
Q ss_pred ccccccccCceEEEEEEECC-CcEEEEEEeC----CCC-ch-hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEe
Q 005102 407 SAFVLGKSGIGIVYKVVLED-GHTLAVRRLG----EGG-SQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 407 ~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~----~~~-~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 479 (714)
...++|.|.+|.|+.+.... ....+.|..+ ... .. ....+..|.-+-..++|||++..+..+.+....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 45689999999888776543 3334444333 111 11 11225668888888999999888877777666666699
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++ ||+.++... ..++..++..++.|+..|++|+|+ .||.|||+|++|+++..++.+||+|||.+....
T Consensus 402 ~~~~-Dlf~~~~~~------~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN------GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFR 471 (601)
T ss_pred cccH-HHHHHHhcc------cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeec
Confidence 9999 999999765 347788899999999999999999 899999999999999999999999999987654
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCch-hhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~-~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.+.... ........|+..|+|||.+.+.+|++. .||||.||++..|++|+.||..
T Consensus 472 ~~~e~~------------------------~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~ 527 (601)
T KOG0590|consen 472 YPWEKN------------------------IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKV 527 (601)
T ss_pred cCcchh------------------------hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccc
Confidence 321100 123345567888999999999999775 7999999999999999999955
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+..... ... ..+. .....+..-......+...++.++++.||.+|.|+++|++
T Consensus 528 a~~~~~~~~~-------~~~-~~~~-~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 528 AKKSDNSFKT-------NNY-SDQR-NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccccchhh-------hcc-cccc-ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 4443332100 000 0000 0000000001223445678999999999999999999985
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.3e-21 Score=189.11 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=109.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCch--h-------H-----------------HHHHHHHHHHhccCCCCcc
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ--R-------F-----------------KEFQTEVEAIGKIRHSNIV 462 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~H~niv 462 (714)
..||+|+||.||+|..++|+.||||+++..... . . .....|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 479999999999999889999999999764211 0 0 1223599999999888875
Q ss_pred ceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCceecCCCCCCeee
Q 005102 463 TLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL-HEFSPKKYVHGDLKPSNILL 541 (714)
Q Consensus 463 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~L-H~~~~~~ivHrDlkp~NILl 541 (714)
....+.. ...++||||++++++....... ..+++.+..+++.|++.+|.|+ |+ .+|+||||||+|||+
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli 151 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY 151 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence 4443322 2348999999987776543222 3578899999999999999999 68 899999999999999
Q ss_pred CCCCCeEEcccchhhhhh
Q 005102 542 GHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 542 ~~~~~~kl~DFGla~~~~ 559 (714)
+ ++.++|+|||+|....
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 4789999999997543
No 413
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=5.9e-21 Score=203.75 Aligned_cols=218 Identities=26% Similarity=0.375 Sum_probs=163.2
Q ss_pred HhccCCCCccceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc-ee
Q 005102 453 IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY-VH 531 (714)
Q Consensus 453 l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i-vH 531 (714)
|+.+.|.|+.+++|.+.+....++|.+|++.|+|.+.+.... ..++|.-...++++|+.||+|+|. .+| .|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~h 72 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHN---SPIGYH 72 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhc---Ccceee
Confidence 467899999999999999999999999999999999998743 569999999999999999999999 455 99
Q ss_pred cCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC
Q 005102 532 GDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV 611 (714)
Q Consensus 532 rDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 611 (714)
+.++++|.++|..+.+||+|||+........... ...+. .-..-|.|||.+.+.
T Consensus 73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~--------~~~~~------------------~~~~lw~aPellr~~ 126 (484)
T KOG1023|consen 73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPE--------AHHPI------------------RKALLWTAPELLRGA 126 (484)
T ss_pred eeeccccceeeeeEEEEechhhhccccccccccc--------ccchh------------------HHHHhccCHHHhccc
Confidence 9999999999999999999999987653200000 00000 012349999999763
Q ss_pred C-------CCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHH
Q 005102 612 K-------PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKI 684 (714)
Q Consensus 612 ~-------~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 684 (714)
. .+.++||||||++++|+++.+.||......... .+.+......+ .....|.+... .+...++..+
T Consensus 127 ~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~~~---~~~~rP~i~~~---~e~~~~l~~l 199 (484)
T KOG1023|consen 127 LSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKKGG---SNPFRPSIELL---NELPPELLLL 199 (484)
T ss_pred ccccccccccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHhcC---CCCcCcchhhh---hhcchHHHHH
Confidence 2 467899999999999999999999654333332 22222222211 11122222211 1233368899
Q ss_pred HhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 685 AMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 685 i~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
+.+||..+|++||++++|...++.+..
T Consensus 200 ~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 200 VARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999999999999999999999988765
No 414
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.83 E-value=1.1e-22 Score=180.96 Aligned_cols=166 Identities=28% Similarity=0.447 Sum_probs=146.6
Q ss_pred cccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCccccccccc
Q 005102 83 ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRL 162 (714)
Q Consensus 83 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 162 (714)
.+.++++.+.|.||+|+++ .+|+.+..+.+|+.|++++|+++ .+|..+++|+.|++|+++-|++. .+|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4567788888899999998 78888899999999999999998 89999999999999999999997 889999999999
Q ss_pred ceeecccCcCCC-CCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccC
Q 005102 163 KALDLSQNNFTG-PLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDL 241 (714)
Q Consensus 163 ~~L~l~~N~l~g-~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l 241 (714)
+.|||++|++.. .+|..|+ .++.|+.|+|++|.|. .+|..++++++|+ .|.+.+|.+- .+|.+++.+.+|+.|++
T Consensus 105 evldltynnl~e~~lpgnff-~m~tlralyl~dndfe-~lp~dvg~lt~lq-il~lrdndll-~lpkeig~lt~lrelhi 180 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFF-YMTTLRALYLGDNDFE-ILPPDVGKLTNLQ-ILSLRDNDLL-SLPKEIGDLTRLRELHI 180 (264)
T ss_pred hhhhccccccccccCCcchh-HHHHHHHHHhcCCCcc-cCChhhhhhccee-EEeeccCchh-hCcHHHHHHHHHHHHhc
Confidence 999999998875 5787775 5899999999999998 8999999999999 9999999887 78999999999999999
Q ss_pred cCCcCCCCCCCCcc
Q 005102 242 TYNNLSGPIPQNGA 255 (714)
Q Consensus 242 ~~N~l~~~~p~~~~ 255 (714)
++|+|+-.+|+...
T Consensus 181 qgnrl~vlppel~~ 194 (264)
T KOG0617|consen 181 QGNRLTVLPPELAN 194 (264)
T ss_pred ccceeeecChhhhh
Confidence 99999988887543
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=8.3e-21 Score=185.30 Aligned_cols=132 Identities=14% Similarity=0.208 Sum_probs=108.3
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHH---------HHHHHHHHHhccCCCCccceEEEEEeC-------
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFK---------EFQTEVEAIGKIRHSNIVTLRAYYWSV------- 471 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~---------~~~~E~~~l~~l~H~niv~l~~~~~~~------- 471 (714)
.+++|.|+||.||.+.. ++..+|||.++........ .+.+|++.+.+++|++|..+.+++...
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 46899999999999766 5778999999765332222 268999999999999999999987643
Q ss_pred -CceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEc
Q 005102 472 -DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVS 550 (714)
Q Consensus 472 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 550 (714)
+..++||||++|.+|.++.. ++. ....+++.+|..+|+ .+++|||+||+||++++++ ++|+
T Consensus 115 ~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i~li 176 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-LRII 176 (232)
T ss_pred cCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-EEEE
Confidence 35789999999999988631 222 245699999999999 9999999999999999988 9999
Q ss_pred ccchhhhh
Q 005102 551 DFGLARLA 558 (714)
Q Consensus 551 DFGla~~~ 558 (714)
|||..+..
T Consensus 177 Dfg~~~~~ 184 (232)
T PRK10359 177 DLSGKRCT 184 (232)
T ss_pred ECCCcccc
Confidence 99987644
No 416
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=9.1e-20 Score=171.11 Aligned_cols=259 Identities=17% Similarity=0.211 Sum_probs=188.2
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCC-CCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH-SNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
..||.|+||.+|.|.. .+|..||||.-+.... ..+...|..+.+.++| ..|.++..|..+..+-.+|||.+ +-+|
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsL 97 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSL 97 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccH
Confidence 4799999999999984 5699999998655432 2467789999999975 67888888888888999999988 7799
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC---CCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~~~ 563 (714)
.+++.-.. +.++.++++-.+-|++.-++|+|. +++|||||||+|.|..-+ ..+.++|||+|+.+.+...
T Consensus 98 EdLfnfC~-----R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 98 EDLFNFCS-----RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred HHHHHHHh-----hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 99987554 468899999999999999999999 999999999999999643 4688999999998765433
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
...++ ........||..|.+--...+.+.+.+-|+-|+|.+|...--|..||.......
T Consensus 170 ~~HIp---------------------yre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t 228 (341)
T KOG1163|consen 170 RQHIP---------------------YREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT 228 (341)
T ss_pred cccCc---------------------cccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence 22211 112234557888998888877788899999999999999999999994332211
Q ss_pred chhHHHHHHHHhhcC-CcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 644 MDLVNWMQLCIEEKK-PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
. .+-.....+.+- ...+.+ +..+ +.++.-.+.-|-..--++-|...-+.+.+.-+.
T Consensus 229 k--~QKyEkI~EkK~s~~ie~L----C~G~-----P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 229 K--KQKYEKISEKKMSTPIEVL----CKGF-----PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred H--HHHHHHHHHhhcCCCHHHH----hCCC-----cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 1 111111111111 111111 1111 225666777787777778888777766665544
No 417
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=2.2e-19 Score=176.11 Aligned_cols=260 Identities=16% Similarity=0.198 Sum_probs=189.7
Q ss_pred cccccccCceEEEEEE-ECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVV-LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+..||+|.||.++.|+ +-+++.||||.=...+. ..++..|.+..+.|. .++|..++-|..++-+-.||+|.+ +-+
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPS 109 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPS 109 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcC
Confidence 4589999999999998 45789999997554332 246778888888884 699999988888888889999998 779
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-----CCeEEcccchhhhhhc
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-----MEPHVSDFGLARLANI 560 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-----~~~kl~DFGla~~~~~ 560 (714)
|.|+..-.. ++++.+++.-||.|++.-++|+|+ +.+|.|||||+|+||... ..+.++|||+|+.+.+
T Consensus 110 LEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 110 LEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred HHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 999887654 569999999999999999999999 999999999999999643 3588999999999877
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
......++.. ...+..||..||+--...+.+.+.+-|.=|+|-++...+-|..||....
T Consensus 182 p~TkqHIPYr---------------------E~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 182 PKTKQHIPYR---------------------EHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred ccccccCccc---------------------cccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 6544333221 1234457888999999999999999999999999999999999994432
Q ss_pred CCcchhHHHHHHHHhhcC--CcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 641 SSEMDLVNWMQLCIEEKK--PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.... .+-.+.+-+.++ ++.+. +.. .++++..-+..++ ..+-++-|..+-+...+..+++
T Consensus 241 A~tn--K~kYeKIGe~Kr~T~i~~L-----c~g--~P~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 241 ADTN--KEKYEKIGETKRSTPIEVL-----CEG--FPEEFATYLRYVR---RLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred Ccch--HHHHHHhccccccCCHHHH-----Hhc--CHHHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHHH
Confidence 2211 111111111111 01110 101 1233333344333 4566777888887777776654
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=6.4e-20 Score=178.10 Aligned_cols=139 Identities=18% Similarity=0.248 Sum_probs=110.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCch--h------------------------HHHHHHHHHHHhccCCCCcc
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ--R------------------------FKEFQTEVEAIGKIRHSNIV 462 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~H~niv 462 (714)
..||+|+||.||+|...+|+.||||+++..... . ...+.+|.+.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 379999999999999888999999998764211 0 12246799999999999886
Q ss_pred ceEEEEEeCCceeEEEeccCCCCHhhh-hhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee
Q 005102 463 TLRAYYWSVDEKLLIYDYIPNGSLATA-LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541 (714)
Q Consensus 463 ~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 541 (714)
....+... ..++||||++++++... +.. ..++..+..+++.|++.++.++|+. .+|+||||||+||++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll 151 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILY 151 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEE
Confidence 55544433 35899999998755433 322 3467788999999999999999973 499999999999999
Q ss_pred CCCCCeEEcccchhhhhh
Q 005102 542 GHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 542 ~~~~~~kl~DFGla~~~~ 559 (714)
+ ++.++|+|||+|+...
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 7899999999998654
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.4e-19 Score=172.75 Aligned_cols=194 Identities=18% Similarity=0.136 Sum_probs=137.4
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchh----HHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR----FKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
..|++|+||+||.+.. .+..++.+.+....... ...|.+|+++|+++. |+++++++++ +..+++|||+.+
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G 82 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAG 82 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecC
Confidence 4799999999997766 57788877776543311 125889999999995 5889999886 457999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC-CCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDL-KPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
.+|.+.+.. ....++.|++++|+++|+ .||+|||| ||+|||+++++.++|+|||+|.......
T Consensus 83 ~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 83 AAMYQRPPR-------------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ccHHhhhhh-------------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 888654311 123578899999999999 99999999 7999999999999999999998543211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCC-chhhhHHHHHHHHHHHhCCCcccc
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPS-QKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s-~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
... +.-...+....... ....++.|++|+...-. ..+ ...+.++-|.-+|.++||+.+...
T Consensus 147 ~~~--------------r~L~~rDl~~llk~-~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 147 RWM--------------RLLAREDLRHLLKH-KRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred hHH--------------HHHHHHHHHHHHHH-HHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 000 00000000000011 11246668888765332 334 567889999999999999988743
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=8.8e-21 Score=201.86 Aligned_cols=225 Identities=22% Similarity=0.249 Sum_probs=175.6
Q ss_pred cccccCceEEEEEEE----CCCcEEEEEEeCCCCch--hHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccC
Q 005102 410 VLGKSGIGIVYKVVL----EDGHTLAVRRLGEGGSQ--RFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
++|+|.||.|+.++- ..|+.+|+|++++.... .......|..++..++ ||.+|++...++.....+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998653 23788899988764221 1124567888999997 9999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|...+... ..+++.....+...++-|++++|. .+|+|||+|++||+++.+|++|+.|||+++..-...
T Consensus 81 gg~lft~l~~~------~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~ 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE------VMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK 151 (612)
T ss_pred cchhhhccccC------CchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence 99999988765 346777788889999999999999 899999999999999999999999999998753221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
...||.-|||||+.. .....+|.||||++++||+||..||..
T Consensus 152 --------------------------------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---- 193 (612)
T KOG0603|consen 152 --------------------------------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---- 193 (612)
T ss_pred --------------------------------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----
Confidence 115688899999997 567899999999999999999999942
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
+.+..+.+....+. .+......+++..+...+|..|--.
T Consensus 194 -----~~~~~Il~~~~~~p-------------~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 -----DTMKRILKAELEMP-------------RELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred -----HHHHHHhhhccCCc-------------hhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 22333333222211 1223345677778888888888544
No 421
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.2e-21 Score=174.40 Aligned_cols=164 Identities=30% Similarity=0.478 Sum_probs=152.4
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
...++.|.|++|+++- +|+.+..|.+|+.|++++|++. .+|..++.+++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 4578999999999984 6888999999999999999998 89999999999999999999998 9999999999999999
Q ss_pred ccCccCCC-CCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccccccccccc
Q 005102 143 LSQNFFNG-SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNL 221 (714)
Q Consensus 143 Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~ 221 (714)
|++|+++. .+|..|..++.|+.|+|++|.|. .+|.+++ .|++|+.|.+.+|.+- ++|.+++.+..|. .|.+.+|.
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg-~lt~lqil~lrdndll-~lpkeig~lt~lr-elhiqgnr 184 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVG-KLTNLQILSLRDNDLL-SLPKEIGDLTRLR-ELHIQGNR 184 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhh-hhcceeEEeeccCchh-hCcHHHHHHHHHH-HHhcccce
Confidence 99999975 68999999999999999999997 8999996 5999999999999998 9999999999999 99999999
Q ss_pred CCcCcCccccCCC
Q 005102 222 FSGSIPASLGNLP 234 (714)
Q Consensus 222 l~g~~p~~~~~l~ 234 (714)
++ .+|.+++++.
T Consensus 185 l~-vlppel~~l~ 196 (264)
T KOG0617|consen 185 LT-VLPPELANLD 196 (264)
T ss_pred ee-ecChhhhhhh
Confidence 98 6777776643
No 422
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.7e-20 Score=208.70 Aligned_cols=252 Identities=18% Similarity=0.262 Sum_probs=173.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCC-chhHHHHHHHHHH--HhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG-SQRFKEFQTEVEA--IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||.+.|=+|.+|++++|. |+||++-+.+ ......|.++++. ....+|||.+++.-.-......|||=+|+.+
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh- 105 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH- 105 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-
Confidence 347999999999999999887 8999987664 3344455544444 4445899999987776666777899999965
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|+|.+..++ -+...+.+-|+.|++.||..+|. .+|+|+|||.+||||+.-.=+.|+||.--|...-.+..
T Consensus 106 nLyDRlSTRP------FL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 106 NLYDRLSTRP------FLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred hhhhhhccch------HHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9999997663 36777888999999999999999 89999999999999998888999999754432111110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC----------CC-CCchhhhHHHHHHHHHHHh-C
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV----------VK-PSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~-~s~~~DVwS~Gvvl~ellt-G 632 (714)
+ .+.+ .-..+ ...-..|+|||-+.. .. .+++-||||+||++.||++ |
T Consensus 177 P-----------------adf~--fFFDT--SrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg 235 (1431)
T KOG1240|consen 177 P-----------------ADFT--FFFDT--SRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEG 235 (1431)
T ss_pred c-----------------ccce--EEEec--CCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcC
Confidence 0 0000 00011 111224999998743 11 5778999999999999998 6
Q ss_pred CCccccCCCCcchhHHHHHHH-HhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 633 RTAVVQVGSSEMDLVNWMQLC-IEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
++||.- -.+..+-... .....-+.++-|+ .+..++..|++.||++|-++++.++.-.++
T Consensus 236 ~PlF~L-----SQL~aYr~~~~~~~e~~Le~Ied~-------------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 236 RPLFTL-----SQLLAYRSGNADDPEQLLEKIEDV-------------SLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred CCcccH-----HHHHhHhccCccCHHHHHHhCcCc-------------cHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 888821 1111111000 0000001111111 366899999999999999999999875543
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=3.8e-19 Score=173.43 Aligned_cols=136 Identities=21% Similarity=0.228 Sum_probs=107.0
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-----CCCCccceEEEEEeCC---cee-EEE
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-----RHSNIVTLRAYYWSVD---EKL-LIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~~~-lV~ 478 (714)
..+||+|+||.||. +++....+||++........+.+.+|+++++.+ .||||++++|++.+.. ..+ +|+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 45899999999996 443333479998776555567899999999999 5799999999998863 333 789
Q ss_pred ec--cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCceecCCCCCCeeeCC----CCCeEEcc
Q 005102 479 DY--IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGL-VYLHEFSPKKYVHGDLKPSNILLGH----NMEPHVSD 551 (714)
Q Consensus 479 e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL-~~LH~~~~~~ivHrDlkp~NILl~~----~~~~kl~D 551 (714)
|| +++|+|.+++.+. .+++. ..++.+++.++ +|||+ .+|+||||||+|||++. +..++|+|
T Consensus 85 e~~G~~~~tL~~~l~~~-------~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC-------RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred cCCCCcchhHHHHHHcc-------cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 99 5579999999653 24444 35688888888 99999 99999999999999974 34799999
Q ss_pred -cchhhh
Q 005102 552 -FGLARL 557 (714)
Q Consensus 552 -FGla~~ 557 (714)
||...+
T Consensus 153 g~G~~~~ 159 (210)
T PRK10345 153 NIGESTF 159 (210)
T ss_pred CCCCcce
Confidence 554443
No 424
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.78 E-value=2.1e-20 Score=195.02 Aligned_cols=205 Identities=23% Similarity=0.226 Sum_probs=171.7
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccC
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (714)
|.|++|++...-...|..+.++++|+|+.|++...-...+++|++|+.|+||+|.+.-.-++.+...++|++|+||+|++
T Consensus 250 lklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i 329 (873)
T KOG4194|consen 250 LKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRI 329 (873)
T ss_pred hhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccc
Confidence 34556666666666777888888888888888877777788899999999999999888888888889999999999999
Q ss_pred CCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCC---CCCCCcccccccccccccCCcC
Q 005102 149 NGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS---NTGNLSSLQGTVDFSHNLFSGS 225 (714)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~---~~~~l~~L~~~l~l~~N~l~g~ 225 (714)
+..-+.+|..|..|++|+|++|+++ .+.+..+.++.+|++|||++|.+++.|.+ .|..|++|+ .|+|.+|+|...
T Consensus 330 ~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr-kL~l~gNqlk~I 407 (873)
T KOG4194|consen 330 TRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR-KLRLTGNQLKSI 407 (873)
T ss_pred ccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh-heeecCceeeec
Confidence 8766778888999999999999997 67766667899999999999999988875 455688888 999999999966
Q ss_pred cCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCCCC
Q 005102 226 IPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGPPL 275 (714)
Q Consensus 226 ~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~~ 275 (714)
.-.+|..++.|+.|||.+|.+...-|..+.-+......+-....+|+|.+
T Consensus 408 ~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 408 PKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQL 457 (873)
T ss_pred chhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccH
Confidence 66899999999999999999999988888777666666767777888764
No 425
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.77 E-value=2.2e-20 Score=195.83 Aligned_cols=183 Identities=27% Similarity=0.401 Sum_probs=156.3
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChh-hcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEE
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLE-LLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQIL 141 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 141 (714)
...++.|+|++|+|.. .|..+..-+++-+|+||+|+|. +||.. |.+|+.|-+||||+|++. .+|+.+..|.+|+.|
T Consensus 102 l~dLt~lDLShNqL~E-vP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL 178 (1255)
T KOG0444|consen 102 LKDLTILDLSHNQLRE-VPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTL 178 (1255)
T ss_pred cccceeeecchhhhhh-cchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhh
Confidence 3578889999999884 6888888889999999999998 56655 568999999999999998 888888888888999
Q ss_pred eccCccCC-------------------------CCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCc
Q 005102 142 DLSQNFFN-------------------------GSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNK 196 (714)
Q Consensus 142 ~Ls~N~l~-------------------------g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~ 196 (714)
+|++|.+. ..+|.++..|.+|..+|||.|++. .+|..+. .+.+|+.|+||+|+
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly-~l~~LrrLNLS~N~ 256 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLY-KLRNLRRLNLSGNK 256 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHh-hhhhhheeccCcCc
Confidence 99888765 247788888899999999999998 8899886 59999999999999
Q ss_pred ccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCC-CCCCC
Q 005102 197 FNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG-PIPQN 253 (714)
Q Consensus 197 l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~-~~p~~ 253 (714)
|+ .+....+....|+ +|++|+|+++ .+|.+++.|+.|+.|.+.+|+|+- -+|+.
T Consensus 257 it-eL~~~~~~W~~lE-tLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSG 311 (1255)
T KOG0444|consen 257 IT-ELNMTEGEWENLE-TLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSG 311 (1255)
T ss_pred ee-eeeccHHHHhhhh-hhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccc
Confidence 98 7777777788888 9999999998 899999999999999999999872 24444
No 426
>PLN03150 hypothetical protein; Provisional
Probab=99.77 E-value=5.5e-18 Score=192.90 Aligned_cols=140 Identities=33% Similarity=0.528 Sum_probs=96.5
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCCCCCCCCCCC--CcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccC
Q 005102 20 SLNGEGYALLSFKQSVHEDPEGSLSNWNSSDENP--CSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRN 97 (714)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~--c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~ 97 (714)
....|..||+++|+++. ++. ..+|++..+.| |.|.||.|..... + ....++.|+|++
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~--~~~W~g~~C~p~~~~w~Gv~C~~~~~----------~--------~~~~v~~L~L~~ 427 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPL--RFGWNGDPCVPQQHPWSGADCQFDST----------K--------GKWFIDGLGLDN 427 (623)
T ss_pred cCchHHHHHHHHHHhcC-Ccc--cCCCCCCCCCCcccccccceeeccCC----------C--------CceEEEEEECCC
Confidence 45678999999999883 442 24897432111 2799999952110 0 011245666677
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCC
Q 005102 98 NKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLP 177 (714)
Q Consensus 98 N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 177 (714)
|.+.|.+|..+..+++|+.|+|++|.|+|.+|..++.+++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+|+|.+|
T Consensus 428 n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP 507 (623)
T PLN03150 428 QGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507 (623)
T ss_pred CCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCC
Confidence 77777777777777777777777777777777777777888888888888887777777777777777777777777776
Q ss_pred ccc
Q 005102 178 NGF 180 (714)
Q Consensus 178 ~~~ 180 (714)
..+
T Consensus 508 ~~l 510 (623)
T PLN03150 508 AAL 510 (623)
T ss_pred hHH
Confidence 654
No 427
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.76 E-value=6.1e-19 Score=177.37 Aligned_cols=230 Identities=19% Similarity=0.280 Sum_probs=143.6
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccC----------CCCccceEEEEEe---
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIR----------HSNIVTLRAYYWS--- 470 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~----------H~niv~l~~~~~~--- 470 (714)
+..||.|+++.||.+++.+ |+.+|||++... .....+++.+|.-....+. |-.++--++...-
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 3579999999999999875 899999987543 2334567777776555532 2233333333221
Q ss_pred ------CC--------ceeEEEeccCCCCHhhhhhC---CCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 005102 471 ------VD--------EKLLIYDYIPNGSLATALHG---KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGD 533 (714)
Q Consensus 471 ------~~--------~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrD 533 (714)
.. ..+++|+-+ .+||.+++.. .... ...+....++.+..|+.+.+++||+ .|+||+|
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgd 170 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHS---YGLVHGD 170 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhh---cceEecc
Confidence 11 235778877 5588887642 1110 1234456677888999999999999 9999999
Q ss_pred CCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---
Q 005102 534 LKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--- 610 (714)
Q Consensus 534 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--- 610 (714)
|||+|++++++|.++|+||+......... .. ...+..|.+||....
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~---------------------------~~----~~~~~~~~PPe~~~~~~~ 219 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRY---------------------------RC----SEFPVAFTPPELESCAGQ 219 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEE---------------------------EG----GGS-TTTS-HHHHHHHTS
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCcee---------------------------ec----cCCCcccCChhhhhhhcc
Confidence 99999999999999999998765432110 00 112356899997633
Q ss_pred -----CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHH
Q 005102 611 -----VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIA 685 (714)
Q Consensus 611 -----~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li 685 (714)
..++.+.|.|++|+++|.|+.|+.||......... .. .+. .+. +..+.+..+|
T Consensus 220 ~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~---------------~~----~f~-~C~--~~Pe~v~~LI 277 (288)
T PF14531_consen 220 FGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADP---------------EW----DFS-RCR--DMPEPVQFLI 277 (288)
T ss_dssp CHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTS---------------GG----GGT-TSS-----HHHHHHH
T ss_pred cCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccc---------------cc----cch-hcC--CcCHHHHHHH
Confidence 24789999999999999999999999432111110 00 111 111 3445688999
Q ss_pred hHccCCCCCCC
Q 005102 686 MACVHSSPEKR 696 (714)
Q Consensus 686 ~~Cl~~dP~~R 696 (714)
..+|++||++|
T Consensus 278 ~~lL~~~~~~R 288 (288)
T PF14531_consen 278 RGLLQRNPEDR 288 (288)
T ss_dssp HHHT-SSGGGS
T ss_pred HHHccCCcccC
Confidence 99999999988
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.74 E-value=9.6e-18 Score=167.78 Aligned_cols=137 Identities=16% Similarity=0.182 Sum_probs=107.1
Q ss_pred ccccccCceEEEEEE--ECCCcEEEEEEeCCCCch------------------------hHHHHHHHHHHHhccCCCC--
Q 005102 409 FVLGKSGIGIVYKVV--LEDGHTLAVRRLGEGGSQ------------------------RFKEFQTEVEAIGKIRHSN-- 460 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~n-- 460 (714)
+.||+|+||.||+|. ..+|+.||||+++..... ....+.+|++.+.++.+..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~ 113 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVP 113 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 579999999999998 567999999998754210 0123678999999997633
Q ss_pred ccceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-ceecCCCCCCe
Q 005102 461 IVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK-YVHGDLKPSNI 539 (714)
Q Consensus 461 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-ivHrDlkp~NI 539 (714)
+.+++++ ...++||||+++++|....... ..+...+...++.|++.+++|||+ .+ |+||||||+||
T Consensus 114 ~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NI 180 (237)
T smart00090 114 VPKPIAW----RRNVLVMEFIGGDGLPAPRLKD------VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNI 180 (237)
T ss_pred CCeeeEe----cCceEEEEEecCCccccccccc------CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhE
Confidence 3344433 2458999999998887654222 234556678999999999999999 88 99999999999
Q ss_pred eeCCCCCeEEcccchhhhhh
Q 005102 540 LLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 540 Ll~~~~~~kl~DFGla~~~~ 559 (714)
+++ ++.++|+|||.|....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 8899999999988643
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=1.6e-17 Score=164.46 Aligned_cols=134 Identities=18% Similarity=0.304 Sum_probs=114.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCch--------hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ--------RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|++|.||+|.+ +|..|++|+....... ....+.+|++++..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 3689999999999998 6788999986543211 124578899999999999998888888788889999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
+++++|.+++... .+ .+..++.+++.+|.++|+ .+++|||++|+||+++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN---------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988533 12 788999999999999999 8999999999999999 78899999999875
No 430
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.1e-17 Score=167.59 Aligned_cols=202 Identities=20% Similarity=0.280 Sum_probs=139.2
Q ss_pred CCCCccceEEEEEe---------------------------CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHH
Q 005102 457 RHSNIVTLRAYYWS---------------------------VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVK 509 (714)
Q Consensus 457 ~H~niv~l~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 509 (714)
+|||||++.++|.+ ....|+||.-++. +|.+++..+ ..+...+.-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-------~~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-------HRSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-------CCchHHHHH
Confidence 59999999887742 1235899988865 999998654 245556777
Q ss_pred HHHHHHHHHHHHhcCCCCCceecCCCCCCeee--CCCC--CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccc
Q 005102 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL--GHNM--EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585 (714)
Q Consensus 510 i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl--~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (714)
|+.|+++|+.|||. ++|.|||+|++|||+ |+|+ .+.|+|||++-.-+.. + +
T Consensus 346 ~laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h-G---------------------l 400 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH-G---------------------L 400 (598)
T ss_pred HHHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeecccc-c---------------------c
Confidence 89999999999999 999999999999998 4444 3578999987532211 1 1
Q ss_pred cceeecccCCCCCCccccCCcccCCCC-----C-CchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCC
Q 005102 586 SLEVTTTNSSSNLGSYYQAPESLKVVK-----P-SQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKP 659 (714)
Q Consensus 586 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 659 (714)
...........+|...-||||+....+ . -.|+|.|+.|.+.||+++...||+..+....+...+
T Consensus 401 qlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y---------- 470 (598)
T KOG4158|consen 401 QLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY---------- 470 (598)
T ss_pred ccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh----------
Confidence 111122333455666789999985432 1 348999999999999999999997654433332221
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 660 LADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 660 ~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.+.--|.+... ...-+.+++...++.||++|++..-....|.
T Consensus 471 -qe~qLPalp~~-----vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 471 -QESQLPALPSR-----VPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred -hhhhCCCCccc-----CChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 11111222221 1224678999999999999998776655553
No 431
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=3e-17 Score=187.24 Aligned_cols=242 Identities=14% Similarity=0.198 Sum_probs=170.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC---CCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR---HSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
...||+|+||+||+|...+|+.||+|+=+....-. |--=.+++.||+ -+.|+++...+.-.+.-++|+||.+.|
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~G 779 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYG 779 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccc
Confidence 35799999999999999889999999877654322 111123344444 345666666666677889999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-------CCCeEEcccchhhh
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-------NMEPHVSDFGLARL 557 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-------~~~~kl~DFGla~~ 557 (714)
+|.+++... ..++|...+.++.|+++-+++||. .+|||+||||+|.||.. ...++|+|||.+--
T Consensus 780 tlld~~N~~------~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 780 TLLDLINTN------KVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred cHHHhhccC------CCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999844 458999999999999999999999 89999999999999942 34689999998754
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
+..=.. .+......+|-.+--+|+..|..+++++|-|.+..+++-|+.|++.=
T Consensus 851 m~lfp~--------------------------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q- 903 (974)
T KOG1166|consen 851 MKLFPD--------------------------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME- 903 (974)
T ss_pred eeEcCC--------------------------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-
Confidence 321000 12233344566688899999999999999999999999999997521
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
...+. ...++..++.. ...+ -..++....|..|-..=|...++...++++.
T Consensus 904 ----------------~~~g~--~~~~~~~~~Ry-~~~~---~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 904 ----------------VKNGS--SWMVKTNFPRY-WKRD---MWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred ----------------hcCCc--ceeccccchhh-hhHH---HHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 11110 11112211111 1111 2345666666644444478888888887764
No 432
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.72 E-value=4.9e-19 Score=185.82 Aligned_cols=154 Identities=31% Similarity=0.467 Sum_probs=103.3
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCc-ccCCcccCCCCCCCEE
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFS-GSVPNEIGKLKYLQIL 141 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L 141 (714)
..+++-|.|...+|. .+|..++.|.+|++|.+++|+|. .+-.++..|+.|+.+++..|++. .-+|..+-.|.-|++|
T Consensus 31 Mt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~l 108 (1255)
T KOG0444|consen 31 MTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTIL 108 (1255)
T ss_pred hhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceee
Confidence 456777777777765 57889999999999999999886 44455555666666666666652 2456666666666666
Q ss_pred eccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccccccccccc
Q 005102 142 DLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNL 221 (714)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~ 221 (714)
|||+|+++ ..|..+..-+++-.|+||+|++. .||..++.+|+.|-.||||+|++. .+|+.+..|..|+ +|+|++|.
T Consensus 109 DLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~Lq-tL~Ls~NP 184 (1255)
T KOG0444|consen 109 DLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQ-TLKLSNNP 184 (1255)
T ss_pred ecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhh-hhhcCCCh
Confidence 66666665 66666666666666666666665 666666666666666666666666 5666666666666 66666664
Q ss_pred C
Q 005102 222 F 222 (714)
Q Consensus 222 l 222 (714)
+
T Consensus 185 L 185 (1255)
T KOG0444|consen 185 L 185 (1255)
T ss_pred h
Confidence 4
No 433
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=4.6e-17 Score=159.66 Aligned_cols=131 Identities=22% Similarity=0.348 Sum_probs=108.7
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCc--------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS--------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+||+|+||.||+|.+ +|..|++|+...... ....++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 578899998654211 11356788999999999988776666666777789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
++++|.+.+... . ..++.+++.+|.+||+ .+++|+|++|.||+++ ++.++++|||+++..
T Consensus 80 ~g~~l~~~~~~~------~-------~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEG------N-------DELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhc------H-------HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999887532 1 0789999999999999 8999999999999999 789999999998753
No 434
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.70 E-value=2.7e-18 Score=179.52 Aligned_cols=194 Identities=21% Similarity=0.195 Sum_probs=150.1
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
.++++.|+|.+|.++..-.+++.-++.|++||||.|.|+.+--..|..-.+++.|+|++|+++..--..|.+|.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 35789999999999888888888888888999988888844444455557788888888888765566677777888888
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCC-----------------------CCCcccccCccccccccccCCcccc
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG-----------------------PLPNGFGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-----------------------~~p~~~~~~l~~L~~L~l~~N~l~g 199 (714)
|+.|+++...+..|.+|++|+.|+|..|++.- .+-++.+-++.+++.|+|+.|+++.
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~ 283 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA 283 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh
Confidence 88888874444456667777777777776531 2233344457788888888888886
Q ss_pred cCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcccc
Q 005102 200 SIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALM 257 (714)
Q Consensus 200 ~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~ 257 (714)
.-..++.+|++|+ .|+||+|.|....+++++..++|++|+|++|+++...+..+...
T Consensus 284 vn~g~lfgLt~L~-~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L 340 (873)
T KOG4194|consen 284 VNEGWLFGLTSLE-QLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVL 340 (873)
T ss_pred hhcccccccchhh-hhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHH
Confidence 6667788899999 99999999999999999999999999999999998887765443
No 435
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.70 E-value=1.2e-18 Score=174.58 Aligned_cols=217 Identities=23% Similarity=0.263 Sum_probs=166.5
Q ss_pred cceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCC-CcC
Q 005102 57 NGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYG-NSF 124 (714)
Q Consensus 57 ~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l 124 (714)
.-|+|+. ...+.|+|..|+|+...|.+|+.+++|+.||||+|+|+-+-|.+|.++.+|..|-+.+ |+|
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 3488973 3567789999999999999999999999999999999999999999999998887776 999
Q ss_pred cccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCc--------------------------
Q 005102 125 SGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPN-------------------------- 178 (714)
Q Consensus 125 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-------------------------- 178 (714)
+...-..|++|.+|+.|.+.-|++.-.....|..+++|..|.+.+|.+. .++.
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccc
Confidence 8433345666666666666666655444444444444444444444332 1111
Q ss_pred ------------------------------------------------------------ccccCccccccccccCCccc
Q 005102 179 ------------------------------------------------------------GFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 179 ------------------------------------------------------------~~~~~l~~L~~L~l~~N~l~ 198 (714)
..+..|++|++|+|++|+++
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~ 287 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT 287 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc
Confidence 11234889999999999999
Q ss_pred ccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcccc-CCCCcccccCCCCCCCCC
Q 005102 199 GSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALM-NRGPTAFIGNPRLCGPPL 275 (714)
Q Consensus 199 g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~~~~~~~ 275 (714)
+.-+.+|..+..++ .|.|..|+|.-.--..|..+.+|+.|+|.+|+++-.-|..+.-. ........+||+.|.+.+
T Consensus 288 ~i~~~aFe~~a~l~-eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l 364 (498)
T KOG4237|consen 288 RIEDGAFEGAAELQ-ELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRL 364 (498)
T ss_pred hhhhhhhcchhhhh-hhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccch
Confidence 88889999999999 99999999987777889999999999999999998888776543 345666789999998754
No 436
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.1e-16 Score=156.72 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=106.1
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCch----------------------hHHHHHHHHHHHhccCCCC--ccc
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ----------------------RFKEFQTEVEAIGKIRHSN--IVT 463 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~n--iv~ 463 (714)
.+.||+|+||.||++..++|+.||||+++..... ....+.+|+.++.++.|++ +..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 4579999999999999988999999987643210 0123678999999998874 444
Q ss_pred eEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC
Q 005102 464 LRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543 (714)
Q Consensus 464 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~ 543 (714)
.++ ....++||||+++++|..+... .....++.+++.++.++|+ .+|+||||||+||++++
T Consensus 100 ~~~----~~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 100 PID----WNRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVDD 160 (198)
T ss_pred eee----cCCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcC
Confidence 444 2456899999999998765421 2346788999999999999 89999999999999999
Q ss_pred CCCeEEcccchhhhhh
Q 005102 544 NMEPHVSDFGLARLAN 559 (714)
Q Consensus 544 ~~~~kl~DFGla~~~~ 559 (714)
++.++|+|||++....
T Consensus 161 ~~~~~liDfg~~~~~~ 176 (198)
T cd05144 161 DEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcEEEEECCccccCC
Confidence 9999999999986543
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.1e-16 Score=180.48 Aligned_cols=132 Identities=21% Similarity=0.351 Sum_probs=109.1
Q ss_pred cccccccCceEEEEEEECCCcEEEEEE-eCCC-Cc------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRR-LGEG-GS------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~-~~~~-~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||+||+|.+.+.. +++|+ +.+. .. ...+.+.+|++++.+++|++++....++...+..++|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence 468999999999999986543 44443 2221 11 123568899999999999999998888888778899999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
|+++++|.+++. ....++.+++++|.|||+ .+++||||||+|||+ +++.++|+|||+++..
T Consensus 417 ~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 417 YIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred ecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999998874 356799999999999999 899999999999999 5779999999999864
No 438
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.69 E-value=3.5e-19 Score=178.55 Aligned_cols=191 Identities=28% Similarity=0.401 Sum_probs=122.3
Q ss_pred EEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCC------------
Q 005102 67 VSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGK------------ 134 (714)
Q Consensus 67 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~------------ 134 (714)
+.++.++|++. .+|++++++.+|+.|+.++|.+. .+|+.++.+..|+.|+..+|+++ .+|+.+++
T Consensus 94 ~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n 170 (565)
T KOG0472|consen 94 KSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGN 170 (565)
T ss_pred HHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhcccc
Confidence 33555666655 35556666666666666666655 45555555555555555555554 44444443
Q ss_pred -----------CCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCC
Q 005102 135 -----------LKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203 (714)
Q Consensus 135 -----------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~ 203 (714)
++.|++||...|-++ .+|+.++.+.+|..|+|..|++. .+| +|. ++..|++|+++.|.+. .+|.
T Consensus 171 ~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~-gcs~L~Elh~g~N~i~-~lpa 245 (565)
T KOG0472|consen 171 KLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFP-GCSLLKELHVGENQIE-MLPA 245 (565)
T ss_pred chhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCC-ccHHHHHHHhcccHHH-hhHH
Confidence 555555555555554 56666666666666666666665 555 342 3566666666666666 6665
Q ss_pred CCC-CCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCC
Q 005102 204 NTG-NLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNP 268 (714)
Q Consensus 204 ~~~-~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 268 (714)
+.+ ++.++. .+||++|++. .+|..++.+.+|.+||+|+|.+++.++..+.. ........|||
T Consensus 246 e~~~~L~~l~-vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 246 EHLKHLNSLL-VLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred HHhcccccce-eeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCc
Confidence 555 677777 8888888887 78888888888999999999999888776654 44455566775
No 439
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=1.1e-17 Score=175.09 Aligned_cols=179 Identities=24% Similarity=0.360 Sum_probs=129.6
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
..|+.|+++...+|.+|+..++.. ...++...+.++.|++.|++| ++.+|||+||.||+...+..+||.||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~---e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG---EERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc---cccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhh
Confidence 578999999999999999755432 457888999999999999999 38999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT- 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt- 631 (714)
|+.......... .......+...||..||+||.+.+..|+.|+||||+|++++|+++
T Consensus 401 gl~ts~~~~~~~----------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~ 458 (516)
T KOG1033|consen 401 GLVTSQDKDETV----------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ 458 (516)
T ss_pred hheeecccCCcc----------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH
Confidence 998755432200 001223445678999999999999999999999999999999998
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
=..++.. . ..+.++-|..+++... ..-..-+.++.+++...|.+||++.++
T Consensus 459 f~T~~er--------~----------~t~~d~r~g~ip~~~~--~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 459 FSTQFER--------I----------ATLTDIRDGIIPPEFL--QDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hccHHHH--------H----------HhhhhhhcCCCChHHh--hcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 2222210 0 0112222222221110 011123578889999999999955443
No 440
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=9.3e-17 Score=179.39 Aligned_cols=215 Identities=20% Similarity=0.268 Sum_probs=139.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.|..|+||.||.++++. .+.+|+ ++.+.... .+- ++.....|.+| ||-.
T Consensus 89 klisngAygavylvrh~~trqrfa~-kiNkq~li-----lRn--ilt~a~npfvv---------------------gDc~ 139 (1205)
T KOG0606|consen 89 KLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI-----LRN--ILTFAGNPFVV---------------------GDCA 139 (1205)
T ss_pred EeeccCCCCceeeeeccccccchhh-cccccchh-----hhc--cccccCCccee---------------------chhh
Confidence 478999999999999875 677888 44332211 110 23233333333 4555
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
..++.. ..++.. .+.+++|||+ .+|+|||+||+|.+|+.-|++|+.|||+++.--..-..
T Consensus 140 tllk~~------g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at--- 199 (1205)
T KOG0606|consen 140 TLLKNI------GPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT--- 199 (1205)
T ss_pred hhcccC------CCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc---
Confidence 555433 223222 2788999999 89999999999999999999999999999864321110
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
+.. .................||+.|+|||++....|+..+|.|++|+|+||.+.|+.||+.. ...++.
T Consensus 200 --nl~--------eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd--tpeelf 267 (1205)
T KOG0606|consen 200 --NLK--------EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--TPEELF 267 (1205)
T ss_pred --hhh--------hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC--CHHHHH
Confidence 000 00000111122334557899999999999999999999999999999999999999532 222222
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
. ..+.+.....+- |... ..+..+++.+.|+.+|..|-
T Consensus 268 g---~visd~i~wpE~-dea~---------p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 268 G---QVISDDIEWPEE-DEAL---------PPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred h---hhhhhhcccccc-CcCC---------CHHHHHHHHHHHHhChHhhc
Confidence 2 222222222222 2222 22567888999999999994
No 441
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.63 E-value=5.1e-18 Score=170.28 Aligned_cols=174 Identities=31% Similarity=0.448 Sum_probs=157.9
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
.+..++..+|+++ .+|++++++.+|..|++.+|++. .+|+..-+++.|+.||...|-++ .+|++++.|.+|.-|+|.
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~ 214 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLR 214 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhh
Confidence 3444566778877 47888999999999999999998 55555555999999999999997 999999999999999999
Q ss_pred CccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSG 224 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g 224 (714)
.|++. .+| +|.+|+.|++|+++.|.+. .+|.+....|.+|..|||.+|+++ ..|.++.-+++|. ++|+|+|.++
T Consensus 215 ~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~-rLDlSNN~is- 288 (565)
T KOG0472|consen 215 RNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLE-RLDLSNNDIS- 288 (565)
T ss_pred hcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhh-hhcccCCccc-
Confidence 99998 788 8999999999999999997 899999888999999999999999 9999999999999 9999999999
Q ss_pred CcCccccCCCCcccccCcCCcCCC
Q 005102 225 SIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 225 ~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
.+|.+++++ +|+.|-+.+|.+..
T Consensus 289 ~Lp~sLgnl-hL~~L~leGNPlrT 311 (565)
T KOG0472|consen 289 SLPYSLGNL-HLKFLALEGNPLRT 311 (565)
T ss_pred cCCcccccc-eeeehhhcCCchHH
Confidence 688899999 99999999999873
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=3.7e-15 Score=149.43 Aligned_cols=137 Identities=20% Similarity=0.258 Sum_probs=107.8
Q ss_pred hcccccc-ccCceEEEEEEECCCcEEEEEEeCCCC-------------chhHHHHHHHHHHHhccCCCCc--cceEEEEE
Q 005102 406 ASAFVLG-KSGIGIVYKVVLEDGHTLAVRRLGEGG-------------SQRFKEFQTEVEAIGKIRHSNI--VTLRAYYW 469 (714)
Q Consensus 406 ~~~~~lG-~G~~g~Vy~~~~~~g~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~ 469 (714)
....+|| .||.|+||++... +..+|||++.... ......+.+|++++.+++|++| ++.+++..
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV 112 (239)
T ss_pred hcCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence 4456898 8999999999885 7789999885421 1223568899999999998875 67777654
Q ss_pred eCC----ceeEEEeccCC-CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC
Q 005102 470 SVD----EKLLIYDYIPN-GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN 544 (714)
Q Consensus 470 ~~~----~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~ 544 (714)
... ..++||||+++ .+|.+++... .++.. .+.+++.+|.+||+ .||+||||||+|||++.+
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPD 178 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCC
Confidence 432 23599999997 6999887542 23333 36789999999999 999999999999999998
Q ss_pred CCeEEcccchhhh
Q 005102 545 MEPHVSDFGLARL 557 (714)
Q Consensus 545 ~~~kl~DFGla~~ 557 (714)
+.++|+|||.++.
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 8999999998875
No 443
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.60 E-value=5.2e-15 Score=137.73 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=113.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCC--CCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH--SNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|.++.||++...+ ..+++|....... ...+.+|+..+..++| .+++++++++...+..+++|||++++.+
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 368999999999999864 7899999876543 4678999999999976 5899999988888889999999988766
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++..
T Consensus 81 ~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 542 44567888999999999999854347999999999999999899999999998753
No 444
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.60 E-value=8.1e-17 Score=177.29 Aligned_cols=200 Identities=33% Similarity=0.428 Sum_probs=150.4
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
...++.+++++|++++ +|+.++.+.+|+.|+..+|+|+ .+|..+...++|+.|.+..|.++ .+|+.+..++.|+.|+
T Consensus 240 p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 3567778888888886 4588888888888888888885 56666555555555555555555 5555555555555555
Q ss_pred ccCccCC-------------------------------------------------CCCCcccccccccceeecccCcCC
Q 005102 143 LSQNFFN-------------------------------------------------GSLPVSIVQCKRLKALDLSQNNFT 173 (714)
Q Consensus 143 Ls~N~l~-------------------------------------------------g~~p~~~~~l~~L~~L~l~~N~l~ 173 (714)
|..|+|. ...-+.+.+...|+.|+|++|+|.
T Consensus 317 L~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~ 396 (1081)
T KOG0618|consen 317 LQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN 396 (1081)
T ss_pred ehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc
Confidence 5555554 333333445568899999999997
Q ss_pred CCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCC-CCCC
Q 005102 174 GPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG-PIPQ 252 (714)
Q Consensus 174 g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~-~~p~ 252 (714)
.+|.....++..|+.|+||+|+|+ .+|..+.++..|+ +|....|+|. .+| ++..+++|+.+|+|.|+|+- .+|.
T Consensus 397 -~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~-tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 397 -SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH-TLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred -cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH-HHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhh
Confidence 899888888999999999999999 9999999999999 9999999998 788 99999999999999999984 4444
Q ss_pred CccccCCCCcccccCCCC
Q 005102 253 NGALMNRGPTAFIGNPRL 270 (714)
Q Consensus 253 ~~~~~~~~~~~~~~n~~~ 270 (714)
...-.+.....+.||.++
T Consensus 472 ~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 472 ALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hCCCcccceeeccCCccc
Confidence 433344455677788753
No 445
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=4.3e-15 Score=144.11 Aligned_cols=136 Identities=18% Similarity=0.231 Sum_probs=99.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCch--hHHH----------------------HHHHHHHHhccCCCC--cc
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ--RFKE----------------------FQTEVEAIGKIRHSN--IV 462 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~H~n--iv 462 (714)
+.||+|+||.||+|...+|+.||||+++..... .... ...|.+.+.++.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 479999999999999888999999998753211 1111 135666677765443 44
Q ss_pred ceEEEEEeCCceeEEEeccCCCCHhhh-hhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee
Q 005102 463 TLRAYYWSVDEKLLIYDYIPNGSLATA-LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541 (714)
Q Consensus 463 ~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 541 (714)
+.+++ ...++||||++++.+... +... . .. .+..+++.+++.++.++|.. .+|+||||||+||++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~------~-~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili 148 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDV------R-LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILV 148 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhh------h-hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEE
Confidence 44443 346899999998654321 1111 0 11 56788999999999999973 589999999999999
Q ss_pred CCCCCeEEcccchhhhhh
Q 005102 542 GHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 542 ~~~~~~kl~DFGla~~~~ 559 (714)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999997543
No 446
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=2.4e-16 Score=176.91 Aligned_cols=248 Identities=23% Similarity=0.268 Sum_probs=182.2
Q ss_pred cccccCceEEEEEEECC--CcEEEEEEeCCCC--chhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLED--GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|.|+.|-...... ...+|+|.+.... ....+....|..+-+.+. |+|++++++.....+..+++++|..++
T Consensus 27 ~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~ 106 (601)
T KOG0590|consen 27 SIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGG 106 (601)
T ss_pred cccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCccccc
Confidence 48999999998877643 4566777665543 222344556888888886 999999999999999999999999999
Q ss_pred CHhhhh-hCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhcc
Q 005102 485 SLATAL-HGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-EFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l-~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~ 561 (714)
++.+.+ +... ...+......+..|+..++.|+| . .++.|||+||+|.+++..+ ..|++|||+|..+...
T Consensus 107 ~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 107 SLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccccccccCCc-----cCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999888 3331 23566678889999999999999 7 8999999999999999999 9999999999876541
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCC-CccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNL-GSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.+. ........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+...
T Consensus 179 ~g~-------------------------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 179 NGA-------------------------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred CCc-------------------------ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 111 111223334 8889999999874 4577899999999999999999999655
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
.........|......... .+ .........++..+++..+|+.|.+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 234 SRKDGRYSSWKSNKGRFTQ------LP-------WNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccceeeccccccccc------Cc-------cccCChhhhhcccccccCCchhcccccccc
Confidence 5544444444322100000 00 001112456788889989999999987764
No 447
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.53 E-value=2.9e-14 Score=163.11 Aligned_cols=141 Identities=23% Similarity=0.377 Sum_probs=76.4
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+.+.|+|.+++++. +|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|.|+ .+|..+. .+|+.|+
T Consensus 177 ~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~ 247 (754)
T PRK15370 177 KNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEME 247 (754)
T ss_pred ccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEE
Confidence 3456777777777774 455442 46777777777776 4555443 36667777766666 4555432 3455566
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+ .|++++|.+
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt-~LP~~lp--~sL~-~L~Ls~N~L 316 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIR-TLPAHLP--SGIT-HLNVQSNSL 316 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCccc-cCcccch--hhHH-HHHhcCCcc
Confidence 6666555 4554443 34555555555555 3454432 34555555555555 3443322 2333 444444444
Q ss_pred C
Q 005102 223 S 223 (714)
Q Consensus 223 ~ 223 (714)
+
T Consensus 317 t 317 (754)
T PRK15370 317 T 317 (754)
T ss_pred c
Confidence 4
No 448
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.53 E-value=1.8e-14 Score=163.76 Aligned_cols=93 Identities=29% Similarity=0.303 Sum_probs=48.3
Q ss_pred CCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccc
Q 005102 137 YLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVD 216 (714)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~ 216 (714)
+|+.|+|++|+|+ .+|... .+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|+ .+|... ++|. .|+
T Consensus 343 ~Lq~LdLS~N~Ls-~LP~lp---~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt-~LP~l~---s~L~-~Ld 408 (788)
T PRK15387 343 GLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLT-SLPVLP---SELK-ELM 408 (788)
T ss_pred ccceEecCCCccC-CCCCCC---cccceehhhccccc-cCccc----ccccceEEecCCccc-CCCCcc---cCCC-EEE
Confidence 6777777777777 455432 34555556666555 34432 234555566666555 344322 2344 555
Q ss_pred cccccCCcCcCccccCCCCcccccCcCCcCC
Q 005102 217 FSHNLFSGSIPASLGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 217 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 247 (714)
+++|+|++ +|... .+|+.|++++|+|+
T Consensus 409 LS~N~Lss-IP~l~---~~L~~L~Ls~NqLt 435 (788)
T PRK15387 409 VSGNRLTS-LPMLP---SGLLSLSVYRNQLT 435 (788)
T ss_pred ccCCcCCC-CCcch---hhhhhhhhccCccc
Confidence 55555552 34321 23445555555555
No 449
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.52 E-value=2.8e-14 Score=163.36 Aligned_cols=162 Identities=25% Similarity=0.441 Sum_probs=113.5
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
..++.|+|++|+|+. +|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|.++ .+|..+. .+|+.|+|
T Consensus 199 ~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 199 EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 467889999999885 566554 58899999999888 5676553 36888888888887 6777664 57888888
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. .+|+.|++++|+|+ .+|..+. ++|+ .|++++|.|+
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp---~sL~~L~Ls~N~Lt-~LP~~l~--~sL~-~L~Ls~N~Lt 338 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP---SGITHLNVQSNSLT-ALPETLP--PGLK-TLEAGENALT 338 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCccc-cCcccch---hhHHHHHhcCCccc-cCCcccc--ccce-eccccCCccc
Confidence 888887 5777664 47888888888887 4665542 46777777777776 4554432 4555 6666777666
Q ss_pred cCcCccccCCCCcccccCcCCcCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
+ +|..+. ++|+.|++++|+|+.
T Consensus 339 ~-LP~~l~--~sL~~L~Ls~N~L~~ 360 (754)
T PRK15370 339 S-LPASLP--PELQVLDVSKNQITV 360 (754)
T ss_pred c-CChhhc--CcccEEECCCCCCCc
Confidence 3 555443 466666666666663
No 450
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=3.4e-16 Score=163.87 Aligned_cols=178 Identities=28% Similarity=0.406 Sum_probs=157.1
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
..+..+|+.|++. .+|..+..+..|+.|.|..|.+. .+|..++++..|++|||+.|+++ .+|..++.|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3455678888877 57888888999999999999997 89999999999999999999998 8999998887 9999999
Q ss_pred CccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSG 224 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g 224 (714)
+|+++ .+|..++.+..|..||.+.|++. .+|..++ +|.+|+.|++..|++. .+|.++..| .|. .||+|+|+++
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~-~l~slr~l~vrRn~l~-~lp~El~~L-pLi-~lDfScNkis- 224 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG-YLTSLRDLNVRRNHLE-DLPEELCSL-PLI-RLDFSCNKIS- 224 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh-hHHHHHHHHHhhhhhh-hCCHHHhCC-cee-eeecccCcee-
Confidence 99997 89999998899999999999998 7888885 6999999999999998 788888855 466 8999999998
Q ss_pred CcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 225 SIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 225 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
.+|-.|.+|.+|++|-|.+|.|..++.+.
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLqSPPAqI 253 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQSPPAQI 253 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCCCChHHH
Confidence 89999999999999999999999776543
No 451
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.50 E-value=1.1e-13 Score=157.41 Aligned_cols=159 Identities=28% Similarity=0.384 Sum_probs=86.4
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcc------------------
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSG------------------ 126 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g------------------ 126 (714)
.++.|++.+|+|+. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.|+.
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~L 294 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQL 294 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchhhhhhchhhcCEEECcCCcc
Confidence 57778888888885 554 2578888999988888 34532 2344444444444431
Q ss_pred -cCCcccCCCCCCCEEeccCccCCCCCCcccccc-----------------cccceeecccCcCCCCCCcccccCccccc
Q 005102 127 -SVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQC-----------------KRLKALDLSQNNFTGPLPNGFGSGLVSLE 188 (714)
Q Consensus 127 -~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----------------~~L~~L~l~~N~l~g~~p~~~~~~l~~L~ 188 (714)
.+|. .+++|+.|+|++|+|++ +|.....+ .+|+.|+|++|+|+ .+|.. ..+|+
T Consensus 295 t~LP~---~p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~LP~l----p~~L~ 365 (788)
T PRK15387 295 TSLPV---LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-SLPTL----PSELY 365 (788)
T ss_pred ccccc---cccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccC-CCCCC----Ccccc
Confidence 2332 12567777777777763 33311110 13444444444444 23331 12444
Q ss_pred cccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 189 KLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 189 ~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
.|++++|+|+ .+|... .+|+ .|++++|+|++ +|.. .++|+.|++++|+|++.
T Consensus 366 ~L~Ls~N~L~-~LP~l~---~~L~-~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~LssI 417 (788)
T PRK15387 366 KLWAYNNRLT-SLPALP---SGLK-ELIVSGNRLTS-LPVL---PSELKELMVSGNRLTSL 417 (788)
T ss_pred eehhhccccc-cCcccc---cccc-eEEecCCcccC-CCCc---ccCCCEEEccCCcCCCC
Confidence 4455555554 344322 3455 66677777763 4432 24567777777777753
No 452
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=1e-13 Score=151.10 Aligned_cols=140 Identities=21% Similarity=0.320 Sum_probs=101.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhH----------------------------------------HHHHH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRF----------------------------------------KEFQT 448 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~----------------------------------------~~~~~ 448 (714)
+.||.|++|.||+|++++|+.||||+.+.+..... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999999999999999876421110 12556
Q ss_pred HHHHHhccC----CCCccceEEEEE-eCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHH-HHHHHh
Q 005102 449 EVEAIGKIR----HSNIVTLRAYYW-SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAK-GLVYLH 522 (714)
Q Consensus 449 E~~~l~~l~----H~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~-gL~~LH 522 (714)
|.+.+.+++ |.+-+.+-..+. .....++||||+++++|.++..... ... .+.+++..++. .+..+|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-----~~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-----AGL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-----cCC---CHHHHHHHHHHHHHHHHH
Confidence 666666653 332333333332 2346799999999999988764321 112 24556776666 467889
Q ss_pred cCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 523 EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 523 ~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
. .|++|+|+||.||++++++.++++|||++..+.
T Consensus 275 ~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 R---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred h---CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 899999999999999999999999999997664
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=1.8e-15 Score=158.58 Aligned_cols=179 Identities=34% Similarity=0.512 Sum_probs=158.9
Q ss_pred cCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccce
Q 005102 85 GSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKA 164 (714)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 164 (714)
-.|+.-...||+.|++. .+|.++..+..|+.|.|+.|.+. .+|..+++|..|++|||+.|+++ .+|..+..|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 35666778999999998 89999999999999999999998 99999999999999999999998 8999998887 999
Q ss_pred eecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCC
Q 005102 165 LDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYN 244 (714)
Q Consensus 165 L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 244 (714)
|.+++|+++ .+|..++ .+..|..|+.+.|.+. .+|+.++.+.+|+ .+.++.|++. .+|.+++.|+ |..||+|.|
T Consensus 148 li~sNNkl~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr-~l~vrRn~l~-~lp~El~~Lp-Li~lDfScN 221 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLR-DLNVRRNHLE-DLPEELCSLP-LIRLDFSCN 221 (722)
T ss_pred EEEecCccc-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHH-HHHHhhhhhh-hCCHHHhCCc-eeeeecccC
Confidence 999999998 8999997 7999999999999999 9999999999999 9999999998 7899999776 889999999
Q ss_pred cCCCCCCCCccccCCCCcccccCCCCCCCC
Q 005102 245 NLSGPIPQNGALMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 245 ~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~ 274 (714)
+++ .+|-.+..|.......+.|+.+..+|
T Consensus 222 kis-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 222 KIS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred cee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 999 55666666665666666776666554
No 454
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.44 E-value=7.3e-13 Score=161.90 Aligned_cols=182 Identities=26% Similarity=0.268 Sum_probs=122.9
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|.++++. .++..+..+++|+.|+|++|...+.+| .+..+++|+.|+|++|.....+|..++++++|+.|+|
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 46677777777765 356667777778888887765545566 3667777888888777666677777777788888888
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCC-----------------
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTG----------------- 206 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~----------------- 206 (714)
++|...+.+|..+ ++++|+.|+|++|...+.+|.. ..+|+.|+|++|.+. .+|..+.
T Consensus 689 ~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 689 SRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKL 762 (1153)
T ss_pred CCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccccccccccccccccchhhc
Confidence 7765445677655 6677777777776555455532 346666777777665 5554321
Q ss_pred -------------CCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCc
Q 005102 207 -------------NLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNG 254 (714)
Q Consensus 207 -------------~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 254 (714)
..++|+ .|++++|...+.+|.+++++++|+.|++++|+.-+.+|...
T Consensus 763 ~~~~~~l~~~~~~~~~sL~-~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~ 822 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLT-RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI 822 (1153)
T ss_pred cccccccchhhhhccccch-heeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC
Confidence 123555 67777777777788888888888888888865444555543
No 455
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.43 E-value=7.4e-13 Score=161.86 Aligned_cols=182 Identities=23% Similarity=0.289 Sum_probs=102.7
Q ss_pred ccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCC
Q 005102 56 WNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKL 135 (714)
Q Consensus 56 w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 135 (714)
|.|+.+ ..+++.|+|+++...+.+|. ++.+++|+.|+|++|.....+|..+..+++|+.|+|++|..-+.+|..+ ++
T Consensus 627 ~~~~~~-l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 627 WDGVHS-LTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred cccccc-CCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 566533 34677777777665556663 6677777777777766555677777777777777777654444555543 34
Q ss_pred CCCCEEeccC---------------------ccCCCCCCccc------------------------------ccccccce
Q 005102 136 KYLQILDLSQ---------------------NFFNGSLPVSI------------------------------VQCKRLKA 164 (714)
Q Consensus 136 ~~L~~L~Ls~---------------------N~l~g~~p~~~------------------------------~~l~~L~~ 164 (714)
++|+.|+|++ |.+. .+|..+ ...++|+.
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~ 782 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTR 782 (1153)
T ss_pred CCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchh
Confidence 4444444443 3332 233221 01135666
Q ss_pred eecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCC
Q 005102 165 LDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYN 244 (714)
Q Consensus 165 L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 244 (714)
|+|++|...+.+|..+. ++++|+.|+|++|...+.+|..+ ++++|+ .|++++|.....+|.. .++|+.|++++|
T Consensus 783 L~Ls~n~~l~~lP~si~-~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~-~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 783 LFLSDIPSLVELPSSIQ-NLHKLEHLEIENCINLETLPTGI-NLESLE-SLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred eeCCCCCCccccChhhh-CCCCCCEEECCCCCCcCeeCCCC-CccccC-EEECCCCCcccccccc---ccccCEeECCCC
Confidence 67777766666777664 47777777777765444666554 455555 5555554333333322 123444444444
Q ss_pred cCC
Q 005102 245 NLS 247 (714)
Q Consensus 245 ~l~ 247 (714)
.++
T Consensus 857 ~i~ 859 (1153)
T PLN03210 857 GIE 859 (1153)
T ss_pred CCc
Confidence 444
No 456
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=2.7e-13 Score=133.54 Aligned_cols=207 Identities=21% Similarity=0.308 Sum_probs=137.8
Q ss_pred HHHhccCCCCccceEEEEEeC-----CceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005102 451 EAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS 525 (714)
Q Consensus 451 ~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 525 (714)
.-+-++.|.|||+++.|+.+. ....++.|||+.|++.++|++..... ..+....-.+|+-||..||.|||++.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~--~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ--KALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh--hhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 445566799999999998653 34578999999999999998654322 45777788899999999999999987
Q ss_pred CCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCC
Q 005102 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAP 605 (714)
Q Consensus 526 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 605 (714)
| +|+|+++.-+-|++..++-+|+.--- -.... +... ...........+-++|.||
T Consensus 197 P-piihgnlTc~tifiq~ngLIkig~~a-p~s~h-----~s~~------------------~~~~~Ek~~~~~~~g~~a~ 251 (458)
T KOG1266|consen 197 P-PIIHGNLTCDTIFIQHNGLIKIGSVA-PDSTH-----PSVN------------------STREAEKSVNTSLPGFSAP 251 (458)
T ss_pred C-ccccCCcchhheeecCCceEEecccC-ccccc-----hhhh------------------hhhHhhhhccccCCccccC
Confidence 6 89999999999999988888864211 10000 0000 0001111222345679999
Q ss_pred cccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHH
Q 005102 606 ESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIA 685 (714)
Q Consensus 606 E~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li 685 (714)
|+-.....+.++|||+||...+||..+..--... .......+-... .....-++. =.+++
T Consensus 252 ~sg~~tn~~~a~dIy~fgmcAlemailEiq~tns-eS~~~~ee~ia~------~i~~len~l-------------qr~~i 311 (458)
T KOG1266|consen 252 ESGTTTNTTGASDIYKFGMCALEMAILEIQSTNS-ESKVEVEENIAN------VIIGLENGL-------------QRGSI 311 (458)
T ss_pred CcCcccccccchhhhhhhHHHHHHHHheeccCCC-cceeehhhhhhh------heeeccCcc-------------ccCcC
Confidence 9987777888999999999999998876422111 111100000000 000000111 12567
Q ss_pred hHccCCCCCCCCCHHHHHH
Q 005102 686 MACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 686 ~~Cl~~dP~~RPt~~evl~ 704 (714)
..|++..|..||+|++++.
T Consensus 312 ~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 312 TKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred cccccCCCCCCcchhhhhc
Confidence 7999999999999998764
No 457
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.38 E-value=2.4e-14 Score=158.02 Aligned_cols=172 Identities=34% Similarity=0.488 Sum_probs=139.9
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcC--------------------------CCCCCEEE
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLE--------------------------AQGLQSLV 118 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------------------------l~~L~~L~ 118 (714)
.++.|.+..|.+. .+|+.+..+++|++|+|..|+|. .+|..+.. ...|+.|+
T Consensus 288 ~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Ly 365 (1081)
T KOG0618|consen 288 SLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELY 365 (1081)
T ss_pred hHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHH
Confidence 4445566667765 46777777888888888888886 44433221 13478889
Q ss_pred cCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcc-cccccccceeecccCcCCCCCCcccccCccccccccccCCcc
Q 005102 119 LYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVS-IVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197 (714)
Q Consensus 119 L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l 197 (714)
|.+|.|+...-+.|.+...|++|+|++|+|. .+|++ +.++..|++|+||+|+|+ .+|..+. .+..|++|...+|++
T Consensus 366 lanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva-~~~~L~tL~ahsN~l 442 (1081)
T KOG0618|consen 366 LANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVA-NLGRLHTLRAHSNQL 442 (1081)
T ss_pred HhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHH-hhhhhHHHhhcCCce
Confidence 9999999888888999999999999999997 77764 678999999999999998 8998884 699999999999999
Q ss_pred cccCCCCCCCCcccccccccccccCCcC-cCccccCCCCcccccCcCCc
Q 005102 198 NGSIPSNTGNLSSLQGTVDFSHNLFSGS-IPASLGNLPEKVYIDLTYNN 245 (714)
Q Consensus 198 ~g~~p~~~~~l~~L~~~l~l~~N~l~g~-~p~~~~~l~~L~~l~l~~N~ 245 (714)
. ..| .+.++++|+ .+|++.|+|+-. +|... .-++|++||+++|.
T Consensus 443 ~-~fP-e~~~l~qL~-~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 443 L-SFP-ELAQLPQLK-VLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNT 487 (1081)
T ss_pred e-ech-hhhhcCcce-EEecccchhhhhhhhhhC-CCcccceeeccCCc
Confidence 9 888 899999999 999999999844 44333 33899999999998
No 458
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.36 E-value=4.4e-14 Score=149.35 Aligned_cols=186 Identities=24% Similarity=0.232 Sum_probs=113.5
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCC---CCEEEccCCCCcc----cCChhhcCC-CCCCEEEcCCCcCccc----CCc
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTD---LRHVNLRNNKFFG----SLPLELLEA-QGLQSLVLYGNSFSGS----VPN 130 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~g~----~p~ 130 (714)
..+++.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 347777777777777666655555555 7777777777762 233344555 6777777777777632 333
Q ss_pred ccCCCCCCCEEeccCccCCCC----CCcccccccccceeecccCcCCCCCCccc---ccCccccccccccCCcccccCCC
Q 005102 131 EIGKLKYLQILDLSQNFFNGS----LPVSIVQCKRLKALDLSQNNFTGPLPNGF---GSGLVSLEKLNLSFNKFNGSIPS 203 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~---~~~l~~L~~L~l~~N~l~g~~p~ 203 (714)
.+..+.+|+.|+|++|.+++. ++..+..+++|++|+|++|.+++.-...+ ...+++|+.|++++|.+++....
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 455666777777777777642 33344455677777777777753222111 12356777777777777642221
Q ss_pred CCC-----CCcccccccccccccCC----cCcCccccCCCCcccccCcCCcCCCC
Q 005102 204 NTG-----NLSSLQGTVDFSHNLFS----GSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 204 ~~~-----~l~~L~~~l~l~~N~l~----g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
.+. ....|+ .+++++|.++ ..+...+..+++|+++++++|.++..
T Consensus 240 ~l~~~~~~~~~~L~-~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 240 ALASALLSPNISLL-TLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHhccCCCce-EEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 111 125666 7777777776 23344556667777777777777743
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=2.2e-12 Score=138.42 Aligned_cols=248 Identities=22% Similarity=0.227 Sum_probs=173.0
Q ss_pred ccccccc--cCceEEEEEEE---CCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEE
Q 005102 407 SAFVLGK--SGIGIVYKVVL---EDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 407 ~~~~lG~--G~~g~Vy~~~~---~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~ 478 (714)
...-+|. |.+|.||.+.. +++..+|+|+-+.. .......=.+|+.-.++++ |+|.++.+..+...+..++-+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 3456888 99999999886 45889999984432 1122233356777777774 999999888888999999999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccc
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAK----GLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFG 553 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~----gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFG 553 (714)
|++. .+|.++-+... .-++......+..+... ||.++|+ ..++|-|+||+||++..+ ...++.|||
T Consensus 198 E~~~-~sl~~~~~~~~-----~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 198 ELCG-ESLQSYCHTPC-----NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred cccc-chhHHhhhccc-----ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence 9884 68888876553 23666777778888888 9999999 899999999999999999 889999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCC
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
+...+....-.... .......|..-|++||... +.++...|||++|.++.|-.++.
T Consensus 269 ~v~~i~~~~~~~~~-----------------------~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~ 324 (524)
T KOG0601|consen 269 LVSKISDGNFSSVF-----------------------KVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGS 324 (524)
T ss_pred eeEEccCCccccce-----------------------eeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhc
Confidence 98876543211110 0011223455699999986 46789999999999999999987
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+....... .|.+ +.... +..++ ......++...+..+++.+|-.|++++.+.+
T Consensus 325 ~~~~~g~~~-----~W~~--------~r~~~---ip~e~-~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 325 HLPSVGKNS-----SWSQ--------LRQGY---IPLEF-CEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccccCCCCC-----Cccc--------ccccc---Cchhh-hcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 766322111 1111 11111 11110 0111223445888999999999998876643
No 460
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.32 E-value=8.7e-14 Score=147.08 Aligned_cols=180 Identities=21% Similarity=0.262 Sum_probs=89.4
Q ss_pred EEEEEcCCCCcc------ccCCccccCCCCCCEEEccCCCCcccCChhhcCCCC---CCEEEcCCCcCcc----cCCccc
Q 005102 66 VVSVSIPKKKLL------GFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQG---LQSLVLYGNSFSG----SVPNEI 132 (714)
Q Consensus 66 ~~~l~l~~~~l~------g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~g----~~p~~~ 132 (714)
++.+++.++.+. ..++..+..+++|+.|+|++|.+.+..+..+..+.+ |+.|++++|++++ .+...+
T Consensus 53 l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l 132 (319)
T cd00116 53 LKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGL 132 (319)
T ss_pred ceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHH
Confidence 555555555544 223344555566666666666665444444444443 6666666666552 222334
Q ss_pred CCC-CCCCEEeccCccCCCC----CCcccccccccceeecccCcCCCC----CCcccccCccccccccccCCccccc---
Q 005102 133 GKL-KYLQILDLSQNFFNGS----LPVSIVQCKRLKALDLSQNNFTGP----LPNGFGSGLVSLEKLNLSFNKFNGS--- 200 (714)
Q Consensus 133 ~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~~l~~L~~L~l~~N~l~g~--- 200 (714)
..+ ++|+.|+|++|.+++. ++..+..+.+|+.|+|++|.+++. ++..+. .+++|+.|+|++|.+++.
T Consensus 133 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~-~~~~L~~L~L~~n~i~~~~~~ 211 (319)
T cd00116 133 KDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLK-ANCNLEVLDLNNNGLTDEGAS 211 (319)
T ss_pred HhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHH-hCCCCCEEeccCCccChHHHH
Confidence 444 5666666666666532 222334445566666666666532 111111 233566666666655422
Q ss_pred -CCCCCCCCcccccccccccccCCcCcCcccc-----CCCCcccccCcCCcCC
Q 005102 201 -IPSNTGNLSSLQGTVDFSHNLFSGSIPASLG-----NLPEKVYIDLTYNNLS 247 (714)
Q Consensus 201 -~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~-----~l~~L~~l~l~~N~l~ 247 (714)
++..+.++++|+ .|++++|.+++.....+. ..+.|+.|++++|.++
T Consensus 212 ~l~~~~~~~~~L~-~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 212 ALAETLASLKSLE-VLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHhcccCCCC-EEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 233344455555 666666665542222221 1245666666666554
No 461
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.31 E-value=4.7e-12 Score=139.53 Aligned_cols=142 Identities=16% Similarity=0.241 Sum_probs=94.7
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchh----------------------------------H------HHHH
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQR----------------------------------F------KEFQ 447 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~----------------------------------~------~~~~ 447 (714)
+.||.|++|.||+|++++ |+.||||+.+++-... . -+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 479999999999999988 9999999997642110 0 1245
Q ss_pred HHHHHHhccC----CCCccceEEEEEe-CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005102 448 TEVEAIGKIR----HSNIVTLRAYYWS-VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH 522 (714)
Q Consensus 448 ~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH 522 (714)
+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++-.-.....+...+.......++.|+ +
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H
Confidence 5665555553 4444554455543 45678999999999998742211100000122222233333333 3
Q ss_pred cCCCCCceecCCCCCCeeeCCCC----CeEEcccchhhhhhc
Q 005102 523 EFSPKKYVHGDLKPSNILLGHNM----EPHVSDFGLARLANI 560 (714)
Q Consensus 523 ~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~~~~~ 560 (714)
. .|++|+|+||.||+++.++ .++++|||++..++.
T Consensus 278 ~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4 6999999999999999888 999999999876643
No 462
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.30 E-value=1.3e-11 Score=117.42 Aligned_cols=129 Identities=24% Similarity=0.250 Sum_probs=96.1
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCcc-ceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIV-TLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.++.|.++.||++... +..|++|........ ...+.+|+++++.+.+.+++ +++++. ....++||||+++.++.+
T Consensus 5 ~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 5 PLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL-LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred ecCCcccCceEEEEEC-CeEEEEEeCCCCccc-ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 5788999999999975 778999987654321 23567899999998765554 444443 334689999999987754
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS--PKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
. . .....++.+++++|+.||... +.+++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~---~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 E---D-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c---c-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 2 0 012345788999999999932 12359999999999999 56899999998864
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=2.3e-12 Score=140.41 Aligned_cols=178 Identities=37% Similarity=0.531 Sum_probs=88.9
Q ss_pred cEEEEEcCCCCccccCCccccCCC-CCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLT-DLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.++.+++.+|.++. +|+....++ +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 34445555555443 333344442 5555555555554 34444555555555555555555 44444445555555555
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|+++ .+|..+..+..|++|.+++|++. .++..+ ..+.++..|.+++|++. .++..+++++.++ .+++++|+++
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~-~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~-~L~~s~n~i~ 268 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSL-SNLKNLSGLELSNNKLE-DLPESIGNLSNLE-TLDLSNNQIS 268 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhh-hhcccccccccCCceee-eccchhccccccc-eecccccccc
Confidence 555554 45544444444555555555322 233333 23455555555555554 3344555555555 5555555555
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
.++. ++.+.+++.|++++|.+...+|.
T Consensus 269 -~i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 269 -SISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred -cccc-ccccCccCEEeccCccccccchh
Confidence 2232 55555555555555555555443
No 464
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.24 E-value=2e-13 Score=137.45 Aligned_cols=184 Identities=24% Similarity=0.267 Sum_probs=138.4
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccC-CCCcccCChhhcCCCCCCEEEcCCCcCcc---------------
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRN-NKFFGSLPLELLEAQGLQSLVLYGNSFSG--------------- 126 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g--------------- 126 (714)
-.++..|||++|+|+-+-|.+|.+|.+|..|-+-+ |+|+......|.+|.+|+.|.+.-|++.-
T Consensus 90 l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lL 169 (498)
T KOG4237|consen 90 LHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLL 169 (498)
T ss_pred hhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchh
Confidence 45889999999999999999999999987765554 89985544456666555555554444442
Q ss_pred --------cCCc-ccCCCCCCCEEeccCccCC------------------------------------------------
Q 005102 127 --------SVPN-EIGKLKYLQILDLSQNFFN------------------------------------------------ 149 (714)
Q Consensus 127 --------~~p~-~~~~l~~L~~L~Ls~N~l~------------------------------------------------ 149 (714)
.++. .|..+.+++.+.+..|.+-
T Consensus 170 slyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~e 249 (498)
T KOG4237|consen 170 SLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLE 249 (498)
T ss_pred cccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHH
Confidence 3333 4555555555555555421
Q ss_pred -------------CCCC-cccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccccc
Q 005102 150 -------------GSLP-VSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTV 215 (714)
Q Consensus 150 -------------g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l 215 (714)
+..| ..|..|++|+.|+|++|++++ |-+..+.++..|+.|.|..|+|.-.-...|.+++.|. .|
T Consensus 250 sl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~-i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~-tL 327 (498)
T KOG4237|consen 250 SLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR-IEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLK-TL 327 (498)
T ss_pred hHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch-hhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccce-ee
Confidence 1111 124457789999999999994 5555557899999999999999855557788999999 99
Q ss_pred ccccccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 216 DFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 216 ~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
+|.+|+|+..-|.+|..+.+|..|++-.|.+.-
T Consensus 328 ~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 328 SLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred eecCCeeEEEecccccccceeeeeehccCcccC
Confidence 999999999999999999999999999998863
No 465
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.22 E-value=1.1e-10 Score=111.85 Aligned_cols=135 Identities=12% Similarity=0.125 Sum_probs=98.9
Q ss_pred cccccCceEEEEEEECC-------CcEEEEEEeCCC-------------C---------chhHHHH----HHHHHHHhcc
Q 005102 410 VLGKSGIGIVYKVVLED-------GHTLAVRRLGEG-------------G---------SQRFKEF----QTEVEAIGKI 456 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~-------------~---------~~~~~~~----~~E~~~l~~l 456 (714)
.||.|--+.||.|...+ +..+|||+.+.. + ....+.+ .+|.+.|+++
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl 83 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRM 83 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999999998653 479999987531 0 0112223 3899999999
Q ss_pred CC--CCccceEEEEEeCCceeEEEeccCCCCHhh-hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCceec
Q 005102 457 RH--SNIVTLRAYYWSVDEKLLIYDYIPNGSLAT-ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYL-HEFSPKKYVHG 532 (714)
Q Consensus 457 ~H--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~L-H~~~~~~ivHr 532 (714)
.. -++..++++ ..-++||||+.++.+.. .+.+ ..++..+...+..+++.+|..| |. .+|||+
T Consensus 84 ~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-------~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHG 149 (197)
T cd05146 84 QKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-------AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHA 149 (197)
T ss_pred HHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-------cccCHHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 53 456666654 56789999997654422 2221 1244556678889999999999 88 899999
Q ss_pred CCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 533 DLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 533 Dlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
||++.||+++ ++.+.|+|||.|...+
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999997 4679999999886543
No 466
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.19 E-value=1.8e-11 Score=133.49 Aligned_cols=204 Identities=30% Similarity=0.380 Sum_probs=162.3
Q ss_pred CcccceEecCCcEE---EEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCC-CCCEEEcCCCcCcccCC
Q 005102 54 CSWNGITCKEQRVV---SVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQ-GLQSLVLYGNSFSGSVP 129 (714)
Q Consensus 54 c~w~gv~c~~~~~~---~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~g~~p 129 (714)
+.+.+..+...... .+++..+.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~ 156 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLP 156 (394)
T ss_pred cccccccccccCCCCCceeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhh
Confidence 45555556544444 4777777775433 35667789999999999999 6777777775 9999999999998 888
Q ss_pred cccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCc
Q 005102 130 NEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLS 209 (714)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 209 (714)
..+..+++|+.|++++|+++ .+|.....+++|+.|++++|+++ .+|.... .+..|++|.+++|++. .++..+.++.
T Consensus 157 ~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~-~~~~L~~l~~~~N~~~-~~~~~~~~~~ 232 (394)
T COG4886 157 SPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIE-LLSALEELDLSNNSII-ELLSSLSNLK 232 (394)
T ss_pred hhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhh-hhhhhhhhhhcCCcce-ecchhhhhcc
Confidence 88999999999999999998 78887778899999999999998 7888642 2556999999999755 6788888999
Q ss_pred ccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccC
Q 005102 210 SLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGN 267 (714)
Q Consensus 210 ~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n 267 (714)
.+. .+.+.+|++. .++..++.++++++|++++|+++...+ ...........+.+|
T Consensus 233 ~l~-~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n 287 (394)
T COG4886 233 NLS-GLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGN 287 (394)
T ss_pred ccc-ccccCCceee-eccchhccccccceecccccccccccc-ccccCccCEEeccCc
Confidence 998 8889999987 458889999999999999999997655 333333333333344
No 467
>PLN03150 hypothetical protein; Provisional
Probab=99.18 E-value=2.4e-11 Score=138.66 Aligned_cols=94 Identities=38% Similarity=0.620 Sum_probs=89.3
Q ss_pred CCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccc
Q 005102 113 GLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNL 192 (714)
Q Consensus 113 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l 192 (714)
.++.|+|++|.++|.+|..++.|++|+.|+|++|+|+|.+|..+..+++|+.|+|++|+|+|.+|..+. .+++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~-~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLG-QLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHh-cCCCCCEEEC
Confidence 378999999999999999999999999999999999999999999999999999999999999999885 6999999999
Q ss_pred cCCcccccCCCCCCC
Q 005102 193 SFNKFNGSIPSNTGN 207 (714)
Q Consensus 193 ~~N~l~g~~p~~~~~ 207 (714)
++|+|+|.+|..++.
T Consensus 498 s~N~l~g~iP~~l~~ 512 (623)
T PLN03150 498 NGNSLSGRVPAALGG 512 (623)
T ss_pred cCCcccccCChHHhh
Confidence 999999999988764
No 468
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.16 E-value=2.2e-10 Score=114.18 Aligned_cols=141 Identities=19% Similarity=0.252 Sum_probs=110.6
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCC--CccceEEEEEeCC---ceeEEEeccCC
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHS--NIVTLRAYYWSVD---EKLLIYDYIPN 483 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~---~~~lV~e~~~~ 483 (714)
.|+.|.++.||++...+|..+++|....... ....++.+|+++++.+++. .+.+++.+..... ..++||||+++
T Consensus 5 ~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G 84 (223)
T cd05154 5 QLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDG 84 (223)
T ss_pred ecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCC
Confidence 5899999999999987778999999876432 1335788999999999763 4577777776542 56899999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS-------------------------------------- 525 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------- 525 (714)
.++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 85 ~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 85 RVLRDRLLR-------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 888775431 13677788889999999999998521
Q ss_pred ---------------CCCceecCCCCCCeeeCC--CCCeEEcccchhhh
Q 005102 526 ---------------PKKYVHGDLKPSNILLGH--NMEPHVSDFGLARL 557 (714)
Q Consensus 526 ---------------~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~ 557 (714)
+..++|+|+.+.||++++ ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 56689999998864
No 469
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.15 E-value=1.6e-11 Score=138.09 Aligned_cols=267 Identities=18% Similarity=0.217 Sum_probs=162.9
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
-+-+|.++.++-+.-.. |+..++|...... ..+.+....+-.++-..+||-++....-+......+||++|+.+++
T Consensus 811 p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~ 890 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGD 890 (1205)
T ss_pred cccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCC
Confidence 56678888888776433 5455555443321 1112222333344444455666655444445667899999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|...|+... ..+..-.......+..+++|||. ..+.|||++|.|+++..+++.+++|||............
T Consensus 891 ~~Skl~~~~------~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 891 LPSKLHNSG------CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred chhhhhcCC------CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 999998764 24444556677778899999999 679999999999999999999999999554332210000
Q ss_pred Cc--cCCC-CCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 566 TL--QSNR-MPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 566 ~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.. .... .+.......+....+..-........||+.|.|||...+......+|.|++|++++|.++|..||......
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 00 0000 00000000000001111112245567899999999999999999999999999999999999999433221
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
.. + ..+....+....-..+......+++...+..+|.+|-.|.
T Consensus 1042 ~~-----f----------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 QI-----F----------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hh-----h----------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 10 1 1111111111111122233456777788888999997664
No 470
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=7.5e-10 Score=120.05 Aligned_cols=167 Identities=19% Similarity=0.232 Sum_probs=122.3
Q ss_pred ECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCC
Q 005102 424 LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVP 503 (714)
Q Consensus 424 ~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~ 503 (714)
..++.+|.|...+...........+-++.|+.+|||||+++++.+...+..|+|+|-+. -|..++.+ +.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~---------l~ 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE---------LG 102 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH---------hH
Confidence 34578888887766544333456778889999999999999999999999999999874 45666643 33
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcc
Q 005102 504 WSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQK 583 (714)
Q Consensus 504 ~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (714)
.....-.+.||+.||.|||+. .+++|++|.-+-|++++.|+.||++|-++........ +.+
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---------~~~-------- 163 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---------PAK-------- 163 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---------ccc--------
Confidence 455667889999999999864 5899999999999999999999999988754321110 000
Q ss_pred cccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCC
Q 005102 584 SVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 584 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
...---.|..|+.+.... -..|.|-||++++|++.|.
T Consensus 164 -----------~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 164 -----------SLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -----------cchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 000001266676553222 3469999999999999993
No 471
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=5.7e-11 Score=127.62 Aligned_cols=240 Identities=20% Similarity=0.230 Sum_probs=167.0
Q ss_pred cccccCceEEEEEEEC--CCcEEEEEEeCCCCchhHH--HHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE--DGHTLAVRRLGEGGSQRFK--EFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||.|.|+.||++..+ ++..+++|.+.+....... .-..|+-+...+ .|.+++..+..+......|+--||++++
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~ 351 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGG 351 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCc
Confidence 5999999999998754 5789999988775333222 224566666666 5888888877777777888999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhccCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~~ 563 (714)
++.....-. ..++...++++..|++.++.++|+ ..++|+|+||+||++..+ +..++.|||++.-+.....
T Consensus 352 s~~l~~~~~------~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 352 SSSLRSVTS------QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred chhhhhHHH------HhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccccceecc
Confidence 887765222 457778899999999999999999 899999999999999886 7889999998863211100
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccc-cCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYY-QAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
....++..| .+++......+..++|+||||..+.|.+++..--. ..
T Consensus 423 ------------------------------~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~-~~-- 469 (524)
T KOG0601|consen 423 ------------------------------VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE-SG-- 469 (524)
T ss_pred ------------------------------cccccccccccchhhccccccccccccccccccccccccCcccCc-cc--
Confidence 001112334 35666666778899999999999999999875331 11
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
.+|.. +..-.-+.... ....+..+...+...++..||.+.++....+..
T Consensus 470 ----~~~~~--------i~~~~~p~~~~------~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 470 ----VQSLT--------IRSGDTPNLPG------LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ----cccee--------eecccccCCCc------hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11110 11111111111 113456677788899999999998877655443
No 472
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=8.7e-10 Score=101.71 Aligned_cols=131 Identities=24% Similarity=0.370 Sum_probs=100.8
Q ss_pred cccccCceEEEEEEECCCcEEEEEEe-CCC-C------chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRL-GEG-G------SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~-~~~-~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
++++|+-+.+|.+.+. |..+++|.- ++. . .-...+..+|+.++.+++--.|...+=|..+.+...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999875 444556643 222 1 112345778999999997666666666667788889999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
++-.|.+.+... ...++..+-.-+.-||. .+|+|+||.++||++..+. +.++|||++.+-
T Consensus 82 ~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA-------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc-------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 998888888643 24566677777888999 9999999999999998764 999999999853
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.06 E-value=2.1e-11 Score=118.66 Aligned_cols=138 Identities=29% Similarity=0.330 Sum_probs=95.6
Q ss_pred hhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCcc
Q 005102 106 LELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLV 185 (714)
Q Consensus 106 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~ 185 (714)
..+...+.|+.||||+|.++ .+.....-++.++.|++|+|.+. .+ +++..+.+|+.||||+|.++ .+- ++...|-
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~-Gwh~KLG 352 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECV-GWHLKLG 352 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhh-hhHhhhc
Confidence 33344456777777777776 66666666677778888887776 22 34667777788888887776 222 2334566
Q ss_pred ccccccccCCcccccCCCCCCCCcccccccccccccCCcC-cCccccCCCCcccccCcCCcCCCCCC
Q 005102 186 SLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGS-IPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 186 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~-~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
++++|.|+.|.+. .+ +.++.+-+|. .||+++|+|... --..+++||-|+.+.|.+|.+.+.+.
T Consensus 353 NIKtL~La~N~iE-~L-SGL~KLYSLv-nLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 353 NIKTLKLAQNKIE-TL-SGLRKLYSLV-NLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred CEeeeehhhhhHh-hh-hhhHhhhhhe-eccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 7788888888776 22 3566677777 788888887632 12468899999999999999987764
No 474
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.01 E-value=4.7e-09 Score=106.48 Aligned_cols=150 Identities=17% Similarity=0.157 Sum_probs=107.2
Q ss_pred HHHHHHhccccccccCceEEEEEEECCCcEEEEEEeCCCCchh-H----------HHHHHHHHHHhccCCCCc--cceEE
Q 005102 400 LDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR-F----------KEFQTEVEAIGKIRHSNI--VTLRA 466 (714)
Q Consensus 400 ~~~l~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~H~ni--v~l~~ 466 (714)
++.+.....+++-.-....|+++.+ +|+.|.||+........ . ..+.+|...+.++...+| .++++
T Consensus 19 f~~~~~~~~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa 97 (268)
T PRK15123 19 FEEVKTLQGEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVA 97 (268)
T ss_pred HHHHHhcCCcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeE
Confidence 3444433345566555566888777 57899999875443211 1 147899999988854443 34566
Q ss_pred EEEe-----CCceeEEEeccCCC-CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCee
Q 005102 467 YYWS-----VDEKLLIYDYIPNG-SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNIL 540 (714)
Q Consensus 467 ~~~~-----~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NIL 540 (714)
|... ....++|||++++. +|.+++..... ...+...+..++.+++..+.-||. .||+|+|++++|||
T Consensus 98 ~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiL 170 (268)
T PRK15123 98 FGERGSNPATRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFL 170 (268)
T ss_pred EEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEE
Confidence 6643 23468999999876 79888753211 234556778999999999999999 99999999999999
Q ss_pred eCC-------CCCeEEcccchhhh
Q 005102 541 LGH-------NMEPHVSDFGLARL 557 (714)
Q Consensus 541 l~~-------~~~~kl~DFGla~~ 557 (714)
++. +..+.++||+.++.
T Consensus 171 l~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 171 LHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred EeccccCCCCCceEEEEECCcccc
Confidence 975 46789999998753
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=1.1e-10 Score=109.64 Aligned_cols=109 Identities=28% Similarity=0.307 Sum_probs=28.5
Q ss_pred ccCCCCCCEEEccCCCCcccCChhhc-CCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCccc-ccccc
Q 005102 84 LGSLTDLRHVNLRNNKFFGSLPLELL-EAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSI-VQCKR 161 (714)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~ 161 (714)
+.+...++.|+|++|.|+. +. .+. .+.+|+.|+|++|.++ .++ .+..+++|+.|+|++|+++ .+...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 4455567777777777762 32 344 4667777777777776 333 4666777777777777776 444444 34667
Q ss_pred cceeecccCcCCCCCCc-ccccCccccccccccCCccc
Q 005102 162 LKALDLSQNNFTGPLPN-GFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 162 L~~L~l~~N~l~g~~p~-~~~~~l~~L~~L~l~~N~l~ 198 (714)
|+.|+|++|++.. +-. .....+++|+.|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~-l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISD-LNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---S-CCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCC-hHHhHHHHcCCCcceeeccCCccc
Confidence 7777777777652 111 01123444555555555443
No 476
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.96 E-value=4.5e-09 Score=100.46 Aligned_cols=124 Identities=22% Similarity=0.315 Sum_probs=83.6
Q ss_pred EEEEEEECCCcEEEEEEeCCCCc--------------------------hhHHHHHHHHHHHhccCCC--CccceEEEEE
Q 005102 418 IVYKVVLEDGHTLAVRRLGEGGS--------------------------QRFKEFQTEVEAIGKIRHS--NIVTLRAYYW 469 (714)
Q Consensus 418 ~Vy~~~~~~g~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~--niv~l~~~~~ 469 (714)
.||.|...+|..+|||+.+.... .......+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998754200 0123467899999999765 466666542
Q ss_pred eCCceeEEEeccC--CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHH-HhcCCCCCceecCCCCCCeeeCCCCC
Q 005102 470 SVDEKLLIYDYIP--NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY-LHEFSPKKYVHGDLKPSNILLGHNME 546 (714)
Q Consensus 470 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~-LH~~~~~~ivHrDlkp~NILl~~~~~ 546 (714)
.-++||||++ +..+..+.... ++......++.+++..+.. +|. .||+|+||.+.||+++++ .
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~ 144 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-K 144 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-C
T ss_pred ---CCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-e
Confidence 4579999998 54444433211 2234466778888886666 468 899999999999999988 8
Q ss_pred eEEcccchhhh
Q 005102 547 PHVSDFGLARL 557 (714)
Q Consensus 547 ~kl~DFGla~~ 557 (714)
+.++|||.+..
T Consensus 145 ~~iIDf~qav~ 155 (188)
T PF01163_consen 145 VYIIDFGQAVD 155 (188)
T ss_dssp EEE--GTTEEE
T ss_pred EEEEecCccee
Confidence 99999998764
No 477
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=5.4e-09 Score=95.90 Aligned_cols=140 Identities=19% Similarity=0.252 Sum_probs=103.2
Q ss_pred cccccCceEEEEEEECCCcEEEEEEe-CCCC-------chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRL-GEGG-------SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~-~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
++-+|+-+.|+++.+. |+...||.- .+.- .-..++..+|++.+.+++--.|....=++.+...-.++|||+
T Consensus 14 likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~ 92 (229)
T KOG3087|consen 14 LIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFI 92 (229)
T ss_pred eeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEec
Confidence 6889999999999995 777667643 2221 112356788999999997666666556676777788999999
Q ss_pred CC-CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcccchhhh
Q 005102 482 PN-GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSDFGLARL 557 (714)
Q Consensus 482 ~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~ 557 (714)
++ -++.+++..... ...........+..|-+.+.-||. .+|+|+||..+||++..++ .+.++|||++..
T Consensus 93 ~g~~~vk~~i~~~~~----~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 93 DGASTVKDFILSTME----DESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred cchhHHHHHHHHHcc----CcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 66 377777754421 112222236788889999999999 9999999999999997654 458999999864
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.93 E-value=9.2e-10 Score=103.42 Aligned_cols=125 Identities=30% Similarity=0.427 Sum_probs=43.6
Q ss_pred cCCCCCCEEEcCCCcCcccCCcccC-CCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCcccc
Q 005102 109 LEAQGLQSLVLYGNSFSGSVPNEIG-KLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSL 187 (714)
Q Consensus 109 ~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L 187 (714)
.+..+++.|+|.+|.|+ .+ +.++ .+.+|+.|||++|.++ .++ .+..+++|++|++++|+++ .++..+...+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred ccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 34456788888888886 34 3455 5778888888888887 443 4667788888888888887 4554443347788
Q ss_pred ccccccCCcccccCC-CCCCCCcccccccccccccCCcCcCc----cccCCCCccccc
Q 005102 188 EKLNLSFNKFNGSIP-SNTGNLSSLQGTVDFSHNLFSGSIPA----SLGNLPEKVYID 240 (714)
Q Consensus 188 ~~L~l~~N~l~g~~p-~~~~~l~~L~~~l~l~~N~l~g~~p~----~~~~l~~L~~l~ 240 (714)
+.|+|++|+|...-- ..+..+++|+ .|++.+|+++.. +. .+..+|+|+.||
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~-~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLR-VLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT---EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcc-eeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 888888888863211 3344566777 788888887633 22 345677777776
No 479
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.89 E-value=1.7e-10 Score=112.52 Aligned_cols=115 Identities=27% Similarity=0.315 Sum_probs=74.6
Q ss_pred cccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCC
Q 005102 125 SGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSN 204 (714)
Q Consensus 125 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~ 204 (714)
+|.+-..+...+.|+.||||+|.++ .+..+..-++.++.|++|+|.+. .+-. + ..|++|+.||||+|.++ .+-.+
T Consensus 273 ~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-L-a~L~~L~~LDLS~N~Ls-~~~Gw 347 (490)
T KOG1259|consen 273 NGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-L-AELPQLQLLDLSGNLLA-ECVGW 347 (490)
T ss_pred CCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-h-hhcccceEeecccchhH-hhhhh
Confidence 3444445555567777777777776 66666666777777777777776 3332 3 23677777777777776 44444
Q ss_pred CCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCC
Q 005102 205 TGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 205 ~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 247 (714)
-..+-+.. +|.|+.|.+.. -..++.|-+|.+||+++|++.
T Consensus 348 h~KLGNIK-tL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 348 HLKLGNIK-TLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred HhhhcCEe-eeehhhhhHhh--hhhhHhhhhheeccccccchh
Confidence 44455555 67777777642 123556667777777777775
No 480
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.87 E-value=2.5e-09 Score=75.62 Aligned_cols=41 Identities=54% Similarity=1.148 Sum_probs=31.4
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCCCCCCC-CCCCcccceEec
Q 005102 22 NGEGYALLSFKQSVHEDPEGSLSNWNSSD-ENPCSWNGITCK 62 (714)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~~~l~~w~~~~-~~~c~w~gv~c~ 62 (714)
+.|++||++||+++..+|.+.+.+|+.+. .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999777888999999774 799999999995
No 481
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.83 E-value=9.6e-08 Score=100.69 Aligned_cols=171 Identities=25% Similarity=0.349 Sum_probs=127.5
Q ss_pred eEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe----CCceeEEEeccCC-CCHhhhh
Q 005102 417 GIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS----VDEKLLIYDYIPN-GSLATAL 490 (714)
Q Consensus 417 g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~~~-gsL~~~l 490 (714)
.+.||+.. .||..|++|++.............-++.++++.|+|+|++.+++.. +...++||+|.++ ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 57899985 4799999999944333222233456889999999999999998863 3467899999986 6777765
Q ss_pred hCCCCCC---------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 491 HGKPGMV---------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 491 ~~~~~~~---------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
....... .....++...+.++.|+..||.++|+ .|+.-+-|.+.+|+++.+.+++|+..|....+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4322111 11357788999999999999999999 89999999999999999999999988876554322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.. |-+. --.+-|.-.||.+++-|.||..-
T Consensus 447 ~~------------------------------------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 447 PT------------------------------------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CC------------------------------------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 10 1111 12367888999999999999643
No 482
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.79 E-value=3.9e-08 Score=96.34 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=97.9
Q ss_pred hccccccccCceEEEEEEECCCcEEEEEEeCCCCc----------------------hhHHHHHHHHHHHhccCCC--Cc
Q 005102 406 ASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS----------------------QRFKEFQTEVEAIGKIRHS--NI 461 (714)
Q Consensus 406 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~H~--ni 461 (714)
+.++.||-|--+.||.|..+.|.++|||.=+.+.. ......++|.++|.++.-. .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 44678999999999999999999999996433211 1134578899999999654 66
Q ss_pred cceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee
Q 005102 462 VTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 541 (714)
Q Consensus 462 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 541 (714)
.+.+++ +...+||||+++-.|...- ++....-.|+..|+.-+.-+-. .||||+|+.+-||++
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV 235 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILV 235 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEE
Confidence 666654 4568999999886554421 1222334444555554444445 699999999999999
Q ss_pred CCCCCeEEcccchhhhh
Q 005102 542 GHNMEPHVSDFGLARLA 558 (714)
Q Consensus 542 ~~~~~~kl~DFGla~~~ 558 (714)
+++|.+.++||--+...
T Consensus 236 ~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 236 TEDGDIVVIDWPQAVPI 252 (304)
T ss_pred ecCCCEEEEeCcccccC
Confidence 99999999999766543
No 483
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.75 E-value=1.8e-09 Score=110.80 Aligned_cols=177 Identities=20% Similarity=0.249 Sum_probs=126.6
Q ss_pred cEEEEEcCCCCccccCC--ccccCCCCCCEEEccCCCCcccCCh--hhcCCCCCCEEEcCCCcCcccCCccc-CCCCCCC
Q 005102 65 RVVSVSIPKKKLLGFLP--SALGSLTDLRHVNLRNNKFFGSLPL--ELLEAQGLQSLVLYGNSFSGSVPNEI-GKLKYLQ 139 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p--~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~ 139 (714)
++..+.|.+.... ..+ .....+++++.||||.|-|....|- -...|++|+.|+|+.|++.-...... ..++.|+
T Consensus 122 kL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 122 KLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred hhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 5555566554433 222 3567889999999999998754442 24578999999999999963333322 2568999
Q ss_pred EEeccCccCCCC-CCcccccccccceeecccCcCCC--CCCcccccCccccccccccCCcccccCC--CCCCCCcccccc
Q 005102 140 ILDLSQNFFNGS-LPVSIVQCKRLKALDLSQNNFTG--PLPNGFGSGLVSLEKLNLSFNKFNGSIP--SNTGNLSSLQGT 214 (714)
Q Consensus 140 ~L~Ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~~l~~L~~L~l~~N~l~g~~p--~~~~~l~~L~~~ 214 (714)
.|.|+.+.|+-. +-..+..+++|+.|+|..|...+ ..+. ..+..|+.|||++|++- ..+ ...+.++.|. .
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~---~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~-~ 275 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATST---KILQTLQELDLSNNNLI-DFDQGYKVGTLPGLN-Q 275 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchh---hhhhHHhhccccCCccc-ccccccccccccchh-h
Confidence 999999999832 11234567899999999995322 2222 23678999999999987 444 5667888888 8
Q ss_pred cccccccCCcC-cCcc-----ccCCCCcccccCcCCcCC
Q 005102 215 VDFSHNLFSGS-IPAS-----LGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 215 l~l~~N~l~g~-~p~~-----~~~l~~L~~l~l~~N~l~ 247 (714)
|+++.+.++.. +|+. ...+++|++|+++.|++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 88888888643 3433 467899999999999986
No 484
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=7.6e-09 Score=79.85 Aligned_cols=58 Identities=36% Similarity=0.468 Sum_probs=24.0
Q ss_pred CCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCc
Q 005102 114 LQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNN 171 (714)
Q Consensus 114 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 171 (714)
|++|+|++|+++...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 3444444444442222334444444444444444443333344444444444444443
No 485
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.72 E-value=5e-07 Score=92.94 Aligned_cols=263 Identities=14% Similarity=0.138 Sum_probs=153.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEE----EE--eCC-ceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAY----YW--SVD-EKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~----~~--~~~-~~~lV~e~ 480 (714)
.-||+|+-+.+|-.--- +.. +.|++...-.... .+.++.|... .||-+..-+.+ .+ ..+ ..-+.|..
T Consensus 17 r~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~ 91 (637)
T COG4248 17 RPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK 91 (637)
T ss_pred ccccCCccceeeecchh-hch-hheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence 46999999999965322 112 4566665433221 1223344444 56644331111 11 112 24577777
Q ss_pred cCCC-CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 481 IPNG-SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 481 ~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
+++. -...++.....+.++....|.-.++.++.+|.+.+-||+ .|.+-+|+.++|+|+.+++.+.|.|=..-....
T Consensus 92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ 168 (637)
T COG4248 92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA 168 (637)
T ss_pred CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeecc
Confidence 7653 222233322223344678899999999999999999999 899999999999999999999998732111100
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhC-C
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITG-R 633 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG-~ 633 (714)
. .......+|...|.+||.-. +..-+...|-|.+||++++++.| +
T Consensus 169 -n----------------------------g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggr 219 (637)
T COG4248 169 -N----------------------------GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGR 219 (637)
T ss_pred -C----------------------------CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCC
Confidence 0 12233456677899999764 33457789999999999999986 9
Q ss_pred CccccCC---CCcchhH-HHHHHHHhhcCCcccccCCCCCC--CCCcHHHHHHHHHHHhHccCC--CCCCCCCHHHHHHH
Q 005102 634 TAVVQVG---SSEMDLV-NWMQLCIEEKKPLADVLDPYLAP--DADKEEEIIAVLKIAMACVHS--SPEKRPTMRHISDA 705 (714)
Q Consensus 634 ~p~~~~~---~~~~~l~-~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~l~~li~~Cl~~--dP~~RPt~~evl~~ 705 (714)
+||.... .....+. ......+.... +.-.+.... ......-...+..+..+|+.. ++.-|||++.-+..
T Consensus 220 HPysGI~~~~~ap~p~E~~Ia~g~f~ya~---~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aA 296 (637)
T COG4248 220 HPYSGIPLISDAPNPLETDIAHGRFAYAS---DQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAA 296 (637)
T ss_pred CCCCcccccCCCCCcchhhhhcceeeech---hccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Confidence 9994321 1111111 11111010000 000011111 111112223455666788765 35689999999988
Q ss_pred Hhhhhc
Q 005102 706 LDRLIV 711 (714)
Q Consensus 706 L~~i~~ 711 (714)
|.++..
T Consensus 297 l~al~~ 302 (637)
T COG4248 297 LDALRQ 302 (637)
T ss_pred HHHHHH
Confidence 877653
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=8.3e-09 Score=79.63 Aligned_cols=61 Identities=30% Similarity=0.419 Sum_probs=48.6
Q ss_pred CCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccC
Q 005102 88 TDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148 (714)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (714)
++|++|+|++|+|+...+..|..+++|++|+|++|.++...|..|.++++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888866566777888888888888888877777788888888888888875
No 487
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.65 E-value=7e-08 Score=105.96 Aligned_cols=150 Identities=21% Similarity=0.346 Sum_probs=99.1
Q ss_pred CHHHHHHhcc-ccccccCceEEEEEEECCCcEEEEEEeCCCCchh-----------------------------------
Q 005102 399 DLDELLKASA-FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQR----------------------------------- 442 (714)
Q Consensus 399 ~~~~l~~~~~-~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------------------------------- 442 (714)
..+|+....+ +.|+.++-|.||+|++++|+.||||+.+.+-...
T Consensus 120 ~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~ 199 (517)
T COG0661 120 PIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFE 199 (517)
T ss_pred CHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHH
Confidence 3455555444 6799999999999999999999999876531110
Q ss_pred -----HHHHHHHHHHHhccC----CCCccceEEEEEe-CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHH
Q 005102 443 -----FKEFQTEVEAIGKIR----HSNIVTLRAYYWS-VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIK 512 (714)
Q Consensus 443 -----~~~~~~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~ 512 (714)
.-++.+|..-+.+++ +.-=+.+=..|++ .....|+|||++|-.+.+...-.. ...+ +..++.
T Consensus 200 ~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-----~g~d---~k~ia~ 271 (517)
T COG0661 200 KRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-----AGID---RKELAE 271 (517)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-----cCCC---HHHHHH
Confidence 012556666666663 2222333334433 467789999999988888742221 1133 233333
Q ss_pred HHHHH-HHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 513 GIAKG-LVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 513 ~ia~g-L~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
.++++ +..+-. .|++|.|..|.||+++.++++.+.|||+...++
T Consensus 272 ~~~~~f~~q~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 272 LLVRAFLRQLLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHHHHHHHHHHh---cCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 33332 222222 489999999999999999999999999987654
No 488
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=6.6e-09 Score=106.81 Aligned_cols=161 Identities=23% Similarity=0.211 Sum_probs=98.6
Q ss_pred cCCCCCCEEEccCCCCcccCC--hhhcCCCCCCEEEcCCCcCcccCC--cccCCCCCCCEEeccCccCCCCCCcc-cccc
Q 005102 85 GSLTDLRHVNLRNNKFFGSLP--LELLEAQGLQSLVLYGNSFSGSVP--NEIGKLKYLQILDLSQNFFNGSLPVS-IVQC 159 (714)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l 159 (714)
.++++|+...|.+.... ..+ .....+++++.||||.|-|+...| .....|++|+.|+|+.|+|.-..-.. -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46677777777776664 222 245567778888888887764333 23456778888888888876322211 1245
Q ss_pred cccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcC--ccccCCCCcc
Q 005102 160 KRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIP--ASLGNLPEKV 237 (714)
Q Consensus 160 ~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p--~~~~~l~~L~ 237 (714)
+.|+.|.|+++.|+-.--..+...+++|+.|+|..|...+.-......+..|+ .|||++|++- ..+ ...+.+|.|.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~-~LdLs~N~li-~~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ-ELDLSNNNLI-DFDQGYKVGTLPGLN 274 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh-hccccCCccc-ccccccccccccchh
Confidence 67777777777776211111112357778888888753323333444456676 7788777775 333 4466777777
Q ss_pred cccCcCCcCCC
Q 005102 238 YIDLTYNNLSG 248 (714)
Q Consensus 238 ~l~l~~N~l~~ 248 (714)
.|+++.+.++.
T Consensus 275 ~Lnls~tgi~s 285 (505)
T KOG3207|consen 275 QLNLSSTGIAS 285 (505)
T ss_pred hhhccccCcch
Confidence 77777777764
No 489
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.59 E-value=3.6e-07 Score=89.72 Aligned_cols=106 Identities=24% Similarity=0.313 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhccCCC--CccceEEEEEeCC----ceeEEEeccCCC-CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHH
Q 005102 444 KEFQTEVEAIGKIRHS--NIVTLRAYYWSVD----EKLLIYDYIPNG-SLATALHGKPGMVSFTPVPWSVRVKIIKGIAK 516 (714)
Q Consensus 444 ~~~~~E~~~l~~l~H~--niv~l~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~ 516 (714)
..+.+|...+.++... .+.+.+++..... ..++|+|++++. +|.+++.... ..+......++.+++.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~------~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE------QLDPSQRRELLRALAR 129 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc------ccchhhHHHHHHHHHH
Confidence 4678899888888543 3556677766532 348999999874 7999887532 2455678889999999
Q ss_pred HHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcccchhhhh
Q 005102 517 GLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSDFGLARLA 558 (714)
Q Consensus 517 gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~ 558 (714)
.++-||+ .||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 130 ~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 130 LIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999 9999999999999999886 8999999987753
No 490
>PRK09902 hypothetical protein; Provisional
Probab=98.58 E-value=1.1e-06 Score=84.62 Aligned_cols=138 Identities=18% Similarity=0.158 Sum_probs=102.9
Q ss_pred ccccCceEEEEEEECCCcEEEEEEeCCCC------chhHHHHHHHHHHHhccCCC--CccceEEEEE-eC----CceeEE
Q 005102 411 LGKSGIGIVYKVVLEDGHTLAVRRLGEGG------SQRFKEFQTEVEAIGKIRHS--NIVTLRAYYW-SV----DEKLLI 477 (714)
Q Consensus 411 lG~G~~g~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~-~~----~~~~lV 477 (714)
-|+||.+-|++..+. |+.+-+|+-...- ......|.+|...+.++... .+.+++ ++. .. ...+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 478999999998875 5578899865321 22346899999999999532 244444 332 11 235799
Q ss_pred EeccCC-CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC--eEEcccch
Q 005102 478 YDYIPN-GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME--PHVSDFGL 554 (714)
Q Consensus 478 ~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl 554 (714)
+|-+.+ -+|.+++.+..- .+.+...+..+..+++..++-||+ .|+.|+|+-+.||+++.++. ++++||--
T Consensus 104 Te~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 997753 588888865421 345677788999999999999999 99999999999999986666 99999976
Q ss_pred hhh
Q 005102 555 ARL 557 (714)
Q Consensus 555 a~~ 557 (714)
++.
T Consensus 177 ~r~ 179 (216)
T PRK09902 177 SRR 179 (216)
T ss_pred cch
Confidence 553
No 491
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.53 E-value=7.5e-09 Score=89.91 Aligned_cols=88 Identities=26% Similarity=0.353 Sum_probs=50.3
Q ss_pred CCCCEEEccCCCCcccCChhhcCC-CCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceee
Q 005102 88 TDLRHVNLRNNKFFGSLPLELLEA-QGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALD 166 (714)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 166 (714)
.+|+..+|++|.|. .+|..|... +.++.|+|++|.++ .+|.++..++.|+.|+++.|.|. ..|.-+..|.+|..|+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 34444566666665 344444332 35666666666665 56666666666666666666665 5555555566666666
Q ss_pred cccCcCCCCCCcc
Q 005102 167 LSQNNFTGPLPNG 179 (714)
Q Consensus 167 l~~N~l~g~~p~~ 179 (714)
..+|.+. +||.+
T Consensus 130 s~~na~~-eid~d 141 (177)
T KOG4579|consen 130 SPENARA-EIDVD 141 (177)
T ss_pred CCCCccc-cCcHH
Confidence 6666554 45544
No 492
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.53 E-value=3.8e-08 Score=107.60 Aligned_cols=173 Identities=28% Similarity=0.284 Sum_probs=100.0
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
..+..+++..|+|.+... .+..+++|++|+|++|.|+...+ +..++.|+.|++++|.++ . ...+..+++|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~-~~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLIS-D-ISGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhheeccCcch-h-ccCCccchhhhcccC
Confidence 456666777777665432 25566777777777777764333 334455777777777775 2 223444677777777
Q ss_pred cCccCCCCCCcc-cccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc--cccccccccc
Q 005102 144 SQNFFNGSLPVS-IVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS--LQGTVDFSHN 220 (714)
Q Consensus 144 s~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~--L~~~l~l~~N 220 (714)
++|.+.. +... ...+.+|+.+++.+|.+. .+. .+ ..+..+..+++..|+++-.-+ +..+.. |+ .+++++|
T Consensus 170 ~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~-~i~-~~-~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~-~l~l~~n 242 (414)
T KOG0531|consen 170 SYNRIVD-IENDELSELISLEELDLGGNSIR-EIE-GL-DLLKKLVLLSLLDNKISKLEG--LNELVMLHLR-ELYLSGN 242 (414)
T ss_pred Ccchhhh-hhhhhhhhccchHHHhccCCchh-ccc-ch-HHHHHHHHhhcccccceeccC--cccchhHHHH-HHhcccC
Confidence 7777763 3222 355666777777777665 221 11 124455555677777662111 111122 55 6777777
Q ss_pred cCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 221 LFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
.+. .++..+..+.++..|++.+|+++..
T Consensus 243 ~i~-~~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 243 RIS-RSPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred ccc-cccccccccccccccchhhcccccc
Confidence 776 3335566677777777777777643
No 493
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=1e-07 Score=104.23 Aligned_cols=158 Identities=18% Similarity=0.235 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeec
Q 005102 512 KGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTT 591 (714)
Q Consensus 512 ~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (714)
.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+.+.........+ ......+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p-~~~yd~~------------------ 164 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYP-FSEYDPP------------------ 164 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccc-cccCCCC------------------
Confidence 3455999999985 689999999999999999999999999876544321111 0000000
Q ss_pred ccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCC
Q 005102 592 TNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPD 671 (714)
Q Consensus 592 ~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 671 (714)
...-..-...|.|||++.+...+.++|+||+||++|.+..|..+......... . +.......+ .....
T Consensus 165 lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-~--~~~~~~~~~--------~~~~~- 232 (700)
T KOG2137|consen 165 LPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-S--YSFSRNLLN--------AGAFG- 232 (700)
T ss_pred CChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcc-h--hhhhhcccc--------ccccc-
Confidence 00011113459999999988889999999999999999954444322221111 0 000000000 00000
Q ss_pred CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 672 ADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 672 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
...+...++.+=+.+.+..++..||++.++.
T Consensus 233 -~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 233 -YSNNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred -ccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 0012233677778889999999999776654
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=9.2e-09 Score=111.51 Aligned_cols=169 Identities=25% Similarity=0.274 Sum_probs=116.3
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcc---cCC-------------------------hhhcC---CCCCCEE
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFG---SLP-------------------------LELLE---AQGLQSL 117 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~---~~p-------------------------~~~~~---l~~L~~L 117 (714)
+..++-.-+| |-.|..+.+|++|.|.+..|.- ..+ ..+.+ .-.|.+.
T Consensus 92 ~~~pa~~pt~--pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a 169 (1096)
T KOG1859|consen 92 LPSPARDPTE--PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATA 169 (1096)
T ss_pred cccCCCCCCC--CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhh
Confidence 4444555554 5678889999999999988752 111 00110 1236677
Q ss_pred EcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcc
Q 005102 118 VLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197 (714)
Q Consensus 118 ~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l 197 (714)
+.++|+|. .+...+.-++.|+.|||++|+|+. . +.+..|..|++|||++|.+. .+|.--..++ .|..|+|++|-+
T Consensus 170 ~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v-~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l 244 (1096)
T KOG1859|consen 170 SFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-V-DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNAL 244 (1096)
T ss_pred hcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-h-HHHHhcccccccccccchhc-cccccchhhh-hheeeeecccHH
Confidence 77888887 667777778888899999998873 2 37778888889999999887 5664322233 388888888888
Q ss_pred cccCCCCCCCCcccccccccccccCCcCcC-ccccCCCCcccccCcCCcCC
Q 005102 198 NGSIPSNTGNLSSLQGTVDFSHNLFSGSIP-ASLGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 198 ~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p-~~~~~l~~L~~l~l~~N~l~ 247 (714)
+ .+ ..+.+|++|+ .||++.|.|++--- .-+..|..|+.|.|.+|.+-
T Consensus 245 ~-tL-~gie~LksL~-~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 245 T-TL-RGIENLKSLY-GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred H-hh-hhHHhhhhhh-ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7 33 2566788888 88888888775421 22456677888888888875
No 495
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.36 E-value=4.9e-06 Score=82.76 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=85.6
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC--ccceEEEEEeCCceeEEEeccCCCC-
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN--IVTLRAYYWSVDEKLLIYDYIPNGS- 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~e~~~~gs- 485 (714)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 36899999999984 25567888877543 2245688999999986443 4677888777777889999998863
Q ss_pred Hhhhh---------------------hCCCCCCCcCCCCHHHHH-HHHH----------HHHH-HHHHHhcC-CCCCcee
Q 005102 486 LATAL---------------------HGKPGMVSFTPVPWSVRV-KIIK----------GIAK-GLVYLHEF-SPKKYVH 531 (714)
Q Consensus 486 L~~~l---------------------~~~~~~~~~~~l~~~~~~-~i~~----------~ia~-gL~~LH~~-~~~~ivH 531 (714)
+...+ |.-.. ...+..... ++.. .+.. ...+|... .+..++|
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~----~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKC----DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC----CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 21111 11100 001111100 0000 0001 12222211 1135789
Q ss_pred cCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 532 GDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 532 rDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
+|+.|.||++++++ +.|+||+.+..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999888 99999998764
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.35 E-value=6.4e-08 Score=84.21 Aligned_cols=139 Identities=19% Similarity=0.292 Sum_probs=106.4
Q ss_pred CCCEEEccCCCCcccCChhhc---CCCCCCEEEcCCCcCcccCCcccCC-CCCCCEEeccCccCCCCCCcccccccccce
Q 005102 89 DLRHVNLRNNKFFGSLPLELL---EAQGLQSLVLYGNSFSGSVPNEIGK-LKYLQILDLSQNFFNGSLPVSIVQCKRLKA 164 (714)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 164 (714)
.+..++|++++|. .++.... ....|+..+|++|.|. .+|+.|.. .+.++.|+|++|.++ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 4566788888775 4555544 4456777899999998 66666654 468999999999998 89999999999999
Q ss_pred eecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCC
Q 005102 165 LDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLP 234 (714)
Q Consensus 165 L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~ 234 (714)
|+++.|.|. ..|.-+.. |.+|-.|+..+|.+. .||-.+. .+++....++.++.+.+.-+.-+..++
T Consensus 105 lNl~~N~l~-~~p~vi~~-L~~l~~Lds~~na~~-eid~dl~-~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAP-LIKLDMLDSPENARA-EIDVDLF-YSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred cccccCccc-cchHHHHH-HHhHHHhcCCCCccc-cCcHHHh-ccccHHHHHhcCCcccccCcccccccC
Confidence 999999998 66766654 889999999999887 7776533 455555778888889887776554443
No 497
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.32 E-value=1.1e-07 Score=104.09 Aligned_cols=127 Identities=32% Similarity=0.433 Sum_probs=53.1
Q ss_pred CCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceee
Q 005102 87 LTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALD 166 (714)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 166 (714)
+..++.+++..|.+.. +-..+..+++|+.|+|.+|.|. .+...+..+++|++|+|++|+|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 3344444444444431 2222344444555555555554 22222444455555555555554221 233334455555
Q ss_pred cccCcCCCCCCcccccCccccccccccCCcccccCCCC-CCCCcccccccccccccC
Q 005102 167 LSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSN-TGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 167 l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~~l~l~~N~l 222 (714)
+++|.++ .+.. + ..+.+|+.+++++|++. .++.. ...+..+. .+++.+|.+
T Consensus 147 l~~N~i~-~~~~-~-~~l~~L~~l~l~~n~i~-~ie~~~~~~~~~l~-~l~l~~n~i 198 (414)
T KOG0531|consen 147 LSGNLIS-DISG-L-ESLKSLKLLDLSYNRIV-DIENDELSELISLE-ELDLGGNSI 198 (414)
T ss_pred eccCcch-hccC-C-ccchhhhcccCCcchhh-hhhhhhhhhccchH-HHhccCCch
Confidence 5555544 2221 1 11444555555555544 22221 23334444 444444444
No 498
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.29 E-value=1.9e-08 Score=109.16 Aligned_cols=128 Identities=29% Similarity=0.223 Sum_probs=87.0
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
.+..++.+.|.|.- +..++.-++.|+.|||++|++...- .+..++.|+.|||++|+|. .+|..=..--.|+.|.|+
T Consensus 165 ~L~~a~fsyN~L~~-mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVL-MDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHh-HHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhhheeeeec
Confidence 34445556666653 4556777788888888888887322 6677888888888888887 565431111348888888
Q ss_pred CccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
+|.++ .+ ..+.+|.+|+.|||++|-|.+.---.+...|..|+.|+|.+|.+-
T Consensus 241 nN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 88887 33 356788888888888888775322222234678888888888775
No 499
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.19 E-value=1.2e-07 Score=95.23 Aligned_cols=181 Identities=21% Similarity=0.235 Sum_probs=108.7
Q ss_pred cEEEEEcCCCCccccCCcc----ccCCCCCCEEEccCCCCccc----CCh---------hhcCCCCCCEEEcCCCcCccc
Q 005102 65 RVVSVSIPKKKLLGFLPSA----LGSLTDLRHVNLRNNKFFGS----LPL---------ELLEAQGLQSLVLYGNSFSGS 127 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~----~~~l~~L~~L~L~~N~l~~~----~p~---------~~~~l~~L~~L~L~~N~l~g~ 127 (714)
+++.|+|+.|-+.-.-++. +.+.+.|++|.|.||.+... +.. ....-+.|+++..+.|++...
T Consensus 93 ~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 93 KLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred ceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccc
Confidence 7778888888776554433 34567788888888877521 111 122335678888888887532
Q ss_pred C----CcccCCCCCCCEEeccCccCCCC----CCcccccccccceeecccCcCCCC----CCcccccCccccccccccCC
Q 005102 128 V----PNEIGKLKYLQILDLSQNFFNGS----LPVSIVQCKRLKALDLSQNNFTGP----LPNGFGSGLVSLEKLNLSFN 195 (714)
Q Consensus 128 ~----p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~~l~~L~~L~l~~N 195 (714)
- ...|...+.|+.+.++.|.+... +-..+..|++|+.|||.+|-|+-. +...+ ..+++|+.|+++++
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL-~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKAL-SSWPHLRELNLGDC 251 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHh-cccchheeeccccc
Confidence 1 12355567788888888877521 122456678888888888877632 11222 23667778888877
Q ss_pred cccccCCC----CC-CCCcccccccccccccCCc----CcCccccCCCCcccccCcCCcCC
Q 005102 196 KFNGSIPS----NT-GNLSSLQGTVDFSHNLFSG----SIPASLGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 196 ~l~g~~p~----~~-~~l~~L~~~l~l~~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~ 247 (714)
.+...=.. .+ ...++|+ .+.+.+|.++. .+-..+...|.|..|+|++|.|.
T Consensus 252 ll~~~Ga~a~~~al~~~~p~L~-vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 252 LLENEGAIAFVDALKESAPSLE-VLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccccHHHHHHHHhccCCCCc-eeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 77522111 11 1134566 77777777762 23334556777777777777773
No 500
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.18 E-value=8.9e-06 Score=89.19 Aligned_cols=148 Identities=16% Similarity=0.286 Sum_probs=94.3
Q ss_pred HHHHHHhc-cccccccCceEEEEEEECCCcEEEEEEeCCCCch-------------------------------------
Q 005102 400 LDELLKAS-AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ------------------------------------- 441 (714)
Q Consensus 400 ~~~l~~~~-~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------------------------------------- 441 (714)
++++.... .+.||.-+.|.||+|++++|+.||||+-+.+-..
T Consensus 157 ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~ 236 (538)
T KOG1235|consen 157 IEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLP 236 (538)
T ss_pred HHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhH
Confidence 34444433 2679999999999999999999999986553111
Q ss_pred hHHHHHHHHHHHhcc----CCCC---ccceEEEEEe-CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHH
Q 005102 442 RFKEFQTEVEAIGKI----RHSN---IVTLRAYYWS-VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKG 513 (714)
Q Consensus 442 ~~~~~~~E~~~l~~l----~H~n---iv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ 513 (714)
..-+|.+|.+-..++ .|-+ =|.+=.++++ .....|+||||+|.-+.+.-.-.. ..++...+. ..
T Consensus 237 ~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-----~gi~~~~i~---~~ 308 (538)
T KOG1235|consen 237 QELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-----RGISPHDIL---NK 308 (538)
T ss_pred hhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-----cCCCHHHHH---HH
Confidence 001355666655554 3444 1222233333 346799999999987766532221 234444333 33
Q ss_pred HHHHHHH--HhcCCCCCceecCCCCCCeeeCC----CCCeEEcccchhhhhh
Q 005102 514 IAKGLVY--LHEFSPKKYVHGDLKPSNILLGH----NMEPHVSDFGLARLAN 559 (714)
Q Consensus 514 ia~gL~~--LH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFGla~~~~ 559 (714)
+.++... ++ .|++|+|=.|.||+++. ++++.+-|||+...+.
T Consensus 309 l~~~~~~qIf~----~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 309 LVEAYLEQIFK----TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred HHHHHHHHHHh----cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 3332221 22 48999999999999984 6789999999987654
Done!