Query 005102
Match_columns 714
No_of_seqs 672 out of 5047
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:25:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 2.5E-54 8.6E-59 453.2 26.6 258 409-712 47-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 7.4E-55 2.5E-59 451.0 21.6 259 408-712 18-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 2.1E-54 7.1E-59 449.6 21.2 257 409-711 32-306 (308)
4 3omv_A RAF proto-oncogene seri 100.0 7.2E-54 2.5E-58 443.5 24.8 256 408-712 41-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 8.4E-53 2.9E-57 438.5 19.6 267 409-713 9-299 (303)
6 4g3f_A NF-kappa-beta-inducing 100.0 2.7E-52 9.2E-57 435.8 22.2 251 409-711 64-316 (336)
7 4fih_A Serine/threonine-protei 100.0 1.1E-52 3.8E-57 440.0 18.7 243 409-704 80-323 (346)
8 4b9d_A Serine/threonine-protei 100.0 2.5E-52 8.6E-57 438.0 20.3 244 409-704 30-276 (350)
9 3fpq_A Serine/threonine-protei 100.0 2.1E-52 7E-57 429.5 19.0 241 409-704 32-282 (290)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.7E-52 1.3E-56 429.5 17.5 243 408-703 37-283 (311)
11 3hyh_A Carbon catabolite-derep 100.0 3.4E-51 1.2E-55 416.7 21.8 239 409-704 19-262 (275)
12 4fie_A Serine/threonine-protei 100.0 3.4E-51 1.2E-55 439.2 21.5 243 409-704 157-400 (423)
13 4ase_A Vascular endothelial gr 100.0 2.2E-51 7.6E-56 434.3 18.4 260 408-712 69-348 (353)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.1E-51 1E-55 422.8 15.0 236 409-699 30-271 (304)
15 4g31_A Eukaryotic translation 100.0 5E-49 1.7E-53 408.0 21.7 255 409-704 11-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.1E-46 3.6E-51 405.4 23.5 258 409-704 60-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 5.7E-47 1.9E-51 403.3 19.8 218 409-640 27-251 (361)
18 3v5w_A G-protein coupled recep 100.0 2.1E-45 7.1E-50 411.4 22.0 242 408-703 194-448 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 2.8E-45 9.6E-50 413.7 21.6 246 408-704 162-410 (573)
20 2qkw_B Protein kinase; three-h 100.0 2E-44 6.8E-49 380.3 25.0 272 409-713 45-317 (321)
21 3uim_A Brassinosteroid insensi 100.0 4.5E-44 1.5E-48 378.4 19.3 283 396-709 18-309 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-43 4.2E-48 372.3 21.5 267 408-711 15-282 (310)
23 3soc_A Activin receptor type-2 100.0 8.2E-44 2.8E-48 375.7 18.1 260 409-712 30-319 (322)
24 2nru_A Interleukin-1 receptor- 100.0 1.7E-42 5.8E-47 363.0 27.1 280 396-712 13-307 (307)
25 3p86_A Serine/threonine-protei 100.0 9E-43 3.1E-47 365.3 23.6 254 408-712 42-299 (309)
26 3fe3_A MAP/microtubule affinit 100.0 7.7E-43 2.6E-47 368.5 21.9 240 409-704 21-264 (328)
27 3kul_A Ephrin type-A receptor 100.0 7.7E-43 2.6E-47 368.6 20.9 255 409-713 55-315 (325)
28 2psq_A Fibroblast growth facto 100.0 1.7E-42 5.8E-47 372.5 23.6 258 408-711 86-364 (370)
29 2c30_A Serine/threonine-protei 100.0 2.3E-42 7.8E-47 364.4 24.1 243 409-704 51-294 (321)
30 4hcu_A Tyrosine-protein kinase 100.0 2.4E-42 8.2E-47 354.7 23.3 251 409-712 16-267 (269)
31 3fxz_A Serine/threonine-protei 100.0 1.4E-42 4.8E-47 361.9 21.6 243 409-704 26-269 (297)
32 3zgw_A Maternal embryonic leuc 100.0 1.1E-42 3.6E-47 369.7 20.6 242 409-704 16-260 (347)
33 3q4u_A Activin receptor type-1 100.0 1.8E-42 6.2E-47 361.6 21.3 257 409-709 14-300 (301)
34 2qol_A Ephrin receptor; recept 100.0 1.1E-42 3.7E-47 374.3 18.7 255 408-712 50-310 (373)
35 3ugc_A Tyrosine-protein kinase 100.0 1.3E-42 4.4E-47 361.8 18.7 260 409-712 16-292 (295)
36 1o6l_A RAC-beta serine/threoni 100.0 5.6E-42 1.9E-46 363.0 22.5 241 409-704 11-260 (337)
37 1qcf_A Haematopoetic cell kina 100.0 2.2E-42 7.4E-47 382.1 19.9 253 408-713 193-446 (454)
38 4eqm_A Protein kinase; transfe 100.0 6.7E-42 2.3E-46 356.2 22.1 255 409-712 17-276 (294)
39 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.4E-42 2.2E-46 351.3 21.3 251 409-712 14-265 (268)
40 3cbl_A C-FES, proto-oncogene t 100.0 9.6E-43 3.3E-47 375.7 14.9 254 408-712 119-375 (377)
41 2yab_A Death-associated protei 100.0 1.6E-41 5.4E-46 362.9 24.1 244 409-704 18-272 (361)
42 3gen_A Tyrosine-protein kinase 100.0 1.5E-41 5.1E-46 351.5 23.1 251 409-712 30-281 (283)
43 3op5_A Serine/threonine-protei 100.0 1.1E-41 3.6E-46 365.9 20.8 267 409-712 41-330 (364)
44 2x4f_A Myosin light chain kina 100.0 1.5E-41 5E-46 365.4 21.7 245 409-704 95-342 (373)
45 2y0a_A Death-associated protei 100.0 3.1E-41 1.1E-45 356.5 23.8 245 408-704 16-271 (326)
46 3lb7_A RAF proto-oncogene seri 100.0 2.9E-41 1E-45 353.6 23.1 255 409-712 42-301 (307)
47 3l9p_A Anaplastic lymphoma kin 100.0 8.6E-42 2.9E-46 366.7 19.3 257 409-711 77-345 (367)
48 1tki_A Titin; serine kinase, m 100.0 1.5E-41 5E-46 358.0 20.4 244 409-704 11-257 (321)
49 4euu_A Serine/threonine-protei 100.0 7.7E-41 2.6E-45 352.5 25.8 266 409-710 15-308 (319)
50 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.5E-42 1.9E-46 365.5 17.2 236 409-699 29-269 (353)
51 3niz_A Rhodanese family protei 100.0 4.8E-41 1.6E-45 352.6 23.7 257 409-704 27-300 (311)
52 1opk_A P150, C-ABL, proto-onco 100.0 5.1E-42 1.7E-46 382.8 17.2 253 408-712 225-479 (495)
53 4f0f_A Serine/threonine-protei 100.0 5.6E-41 1.9E-45 347.9 23.8 246 409-709 25-287 (287)
54 2bdw_A Hypothetical protein K1 100.0 3.8E-41 1.3E-45 360.8 23.2 245 408-704 34-284 (362)
55 1fot_A TPK1 delta, CAMP-depend 100.0 3.4E-41 1.2E-45 354.4 22.4 238 409-704 12-258 (318)
56 4dc2_A Protein kinase C IOTA t 100.0 1.7E-41 5.8E-46 366.0 20.6 241 409-699 58-307 (396)
57 3poz_A Epidermal growth factor 100.0 8.5E-42 2.9E-46 361.1 17.8 251 409-711 21-278 (327)
58 3tki_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 359.3 18.7 246 409-704 13-261 (323)
59 1k9a_A Carboxyl-terminal SRC k 100.0 1.6E-41 5.5E-46 374.6 20.6 247 408-712 198-446 (450)
60 1luf_A Muscle-specific tyrosin 100.0 3.7E-41 1.3E-45 358.6 22.7 258 409-712 53-336 (343)
61 1csn_A Casein kinase-1; phosph 100.0 6E-41 2E-45 349.5 23.7 260 409-712 16-284 (298)
62 2izr_A Casein kinase I isoform 100.0 2.8E-41 9.7E-46 357.6 21.6 260 409-712 15-282 (330)
63 3soa_A Calcium/calmodulin-depe 100.0 5.6E-41 1.9E-45 368.0 24.6 246 408-704 16-267 (444)
64 3t9t_A Tyrosine-protein kinase 100.0 4.7E-41 1.6E-45 344.5 22.2 251 409-712 14-265 (267)
65 3mdy_A Bone morphogenetic prot 100.0 7.6E-41 2.6E-45 355.2 24.6 263 408-714 42-334 (337)
66 3vhe_A Vascular endothelial gr 100.0 9.7E-42 3.3E-46 365.5 17.9 260 408-712 27-356 (359)
67 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.5E-42 3.3E-46 376.6 18.0 253 408-713 189-442 (452)
68 3tt0_A Basic fibroblast growth 100.0 5.2E-41 1.8E-45 362.9 23.3 258 409-712 75-353 (382)
69 4fr4_A YANK1, serine/threonine 100.0 4.4E-41 1.5E-45 361.6 22.5 242 409-703 21-270 (384)
70 2eva_A TAK1 kinase - TAB1 chim 100.0 4.8E-41 1.6E-45 352.0 22.0 249 409-711 14-263 (307)
71 3a8x_A Protein kinase C IOTA t 100.0 5E-41 1.7E-45 357.2 22.3 242 409-699 15-264 (345)
72 1kob_A Twitchin; kinase, intra 100.0 5E-41 1.7E-45 362.2 22.5 245 409-704 57-304 (387)
73 3kmu_A ILK, integrin-linked ki 100.0 6.2E-41 2.1E-45 344.2 22.1 246 409-711 16-270 (271)
74 1xjd_A Protein kinase C, theta 100.0 1.4E-41 4.7E-46 361.0 17.7 240 409-703 23-268 (345)
75 3a62_A Ribosomal protein S6 ki 100.0 6.1E-41 2.1E-45 354.4 22.3 241 409-704 23-276 (327)
76 4fvq_A Tyrosine-protein kinase 100.0 1.3E-41 4.3E-46 353.1 16.3 247 409-713 14-277 (289)
77 3c0i_A Peripheral plasma membr 100.0 3.3E-41 1.1E-45 360.0 20.0 249 408-704 29-286 (351)
78 1ob3_A PFPK5, cell division co 100.0 7.3E-41 2.5E-45 347.3 21.9 257 409-704 8-280 (288)
79 2ivs_A Proto-oncogene tyrosine 100.0 6E-41 2.1E-45 352.3 21.4 259 408-712 28-312 (314)
80 3o0g_A Cell division protein k 100.0 4.8E-41 1.6E-45 349.4 20.3 258 409-704 8-282 (292)
81 3qup_A Tyrosine-protein kinase 100.0 2.2E-41 7.5E-46 357.3 18.0 259 408-712 28-299 (323)
82 3gxj_A TGF-beta receptor type- 100.0 5E-43 1.7E-47 366.1 5.3 261 409-713 9-299 (303)
83 3dtc_A Mitogen-activated prote 100.0 4.1E-41 1.4E-45 345.8 19.4 244 409-709 13-271 (271)
84 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.1E-41 1.8E-45 357.7 20.7 238 409-704 47-293 (350)
85 2i0e_A Protein kinase C-beta I 100.0 5.3E-41 1.8E-45 357.6 20.6 236 409-699 26-266 (353)
86 1mp8_A Focal adhesion kinase 1 100.0 7.1E-41 2.4E-45 346.1 20.8 251 408-711 20-276 (281)
87 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.1E-41 1.4E-45 356.0 19.2 237 409-704 15-258 (336)
88 2pmi_A Negative RE, cyclin-dep 100.0 6.6E-41 2.3E-45 352.6 20.5 262 409-704 11-293 (317)
89 2w4o_A Calcium/calmodulin-depe 100.0 3.3E-41 1.1E-45 359.6 18.1 243 409-704 59-305 (349)
90 3qd2_B Eukaryotic translation 100.0 1.4E-40 4.7E-45 352.3 22.7 255 409-704 12-325 (332)
91 3kn6_A Ribosomal protein S6 ki 100.0 3.2E-41 1.1E-45 356.1 17.8 246 409-703 17-269 (325)
92 3c1x_A Hepatocyte growth facto 100.0 6.8E-41 2.3E-45 360.0 20.6 256 408-712 94-356 (373)
93 4e5w_A Tyrosine-protein kinase 100.0 4.6E-41 1.6E-45 351.2 18.5 258 409-711 27-302 (302)
94 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-40 5.2E-45 346.7 22.4 242 409-704 19-292 (298)
95 1t46_A HOMO sapiens V-KIT hard 100.0 4.5E-41 1.6E-45 353.0 18.4 260 408-712 28-308 (313)
96 3ork_A Serine/threonine protei 100.0 3.8E-41 1.3E-45 353.5 17.7 254 409-710 18-280 (311)
97 1rjb_A FL cytokine receptor; k 100.0 2.8E-41 9.5E-46 359.8 16.9 260 408-712 50-335 (344)
98 2ozo_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 380.8 22.8 251 410-711 343-598 (613)
99 3kex_A Receptor tyrosine-prote 100.0 9.1E-41 3.1E-45 352.9 20.4 251 409-711 19-276 (325)
100 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-40 4.4E-45 345.6 21.2 254 409-711 30-288 (289)
101 2h34_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 346.2 24.3 253 409-712 40-297 (309)
102 1mqb_A Ephrin type-A receptor 100.0 1.2E-40 4.2E-45 353.1 21.2 254 409-712 50-310 (333)
103 1u59_A Tyrosine-protein kinase 100.0 1.6E-40 5.5E-45 344.6 21.7 253 409-712 16-273 (287)
104 2r5t_A Serine/threonine-protei 100.0 8.3E-41 2.8E-45 358.7 19.5 243 409-706 44-291 (373)
105 3uc3_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 356.2 21.4 245 409-704 26-274 (361)
106 1qpc_A LCK kinase; alpha beta 100.0 8E-41 2.8E-45 345.2 18.6 251 409-712 19-270 (279)
107 2pvf_A Fibroblast growth facto 100.0 2.6E-40 8.9E-45 350.8 23.0 258 408-711 40-318 (334)
108 1b6c_B TGF-B superfamily recep 100.0 1.8E-40 6E-45 353.2 21.6 262 408-713 47-338 (342)
109 4eut_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 361.7 20.7 267 409-711 15-309 (396)
110 2y94_A 5'-AMP-activated protei 100.0 1.5E-40 5.2E-45 367.0 21.8 240 409-704 22-266 (476)
111 2h8h_A Proto-oncogene tyrosine 100.0 3E-41 1E-45 380.1 16.3 253 408-713 272-525 (535)
112 3pls_A Macrophage-stimulating 100.0 2.6E-40 8.9E-45 344.7 22.2 257 408-712 26-288 (298)
113 3lxl_A Tyrosine-protein kinase 100.0 3.8E-41 1.3E-45 356.2 16.0 260 409-712 29-304 (327)
114 2v62_A Serine/threonine-protei 100.0 9E-41 3.1E-45 356.0 19.0 265 409-711 43-328 (345)
115 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-41 7.5E-46 356.5 14.0 257 409-711 37-310 (318)
116 2eue_A Carbon catabolite derep 100.0 2.1E-40 7.1E-45 341.4 20.7 239 409-704 19-262 (275)
117 2jii_A Serine/threonine-protei 100.0 8.5E-41 2.9E-45 357.2 18.4 263 409-712 48-337 (352)
118 3f66_A Hepatocyte growth facto 100.0 3.2E-40 1.1E-44 344.2 22.1 256 408-712 30-292 (298)
119 3p1a_A MYT1 kinase, membrane-a 100.0 7.6E-41 2.6E-45 351.2 17.4 239 408-704 62-304 (311)
120 3f3z_A Calcium/calmodulin-depe 100.0 3.1E-40 1.1E-44 340.4 21.6 244 408-704 14-261 (277)
121 2a2a_A Death-associated protei 100.0 4.8E-40 1.6E-44 346.7 23.5 245 408-704 17-272 (321)
122 2ac3_A MAP kinase-interacting 100.0 2E-40 6.7E-45 348.8 20.4 257 409-704 19-295 (316)
123 3fdn_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45 341.3 21.0 239 409-704 15-257 (279)
124 1nxk_A MAP kinase-activated pr 100.0 3E-40 1E-44 358.5 22.3 245 409-704 68-321 (400)
125 4fl3_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 381.7 19.9 251 409-711 375-631 (635)
126 4ejn_A RAC-alpha serine/threon 100.0 1.1E-40 3.9E-45 367.7 18.8 243 408-704 153-404 (446)
127 1u5q_A Serine/threonine protei 100.0 3E-40 1E-44 351.9 21.2 239 409-704 60-305 (348)
128 3gni_B Strad alpha; kinase fol 100.0 2E-40 6.9E-45 359.3 20.2 267 409-704 31-333 (389)
129 3v8s_A RHO-associated protein 100.0 6.2E-41 2.1E-45 363.6 16.1 245 409-704 75-329 (410)
130 4hgt_A Casein kinase I isoform 100.0 4.3E-40 1.5E-44 342.6 21.6 260 409-712 15-281 (296)
131 4aw2_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 363.2 19.0 248 409-704 80-338 (437)
132 3kfa_A Tyrosine-protein kinase 100.0 1E-40 3.4E-45 346.1 16.7 251 409-711 19-271 (288)
133 2wqm_A Serine/threonine-protei 100.0 5.4E-40 1.8E-44 344.5 22.4 256 409-711 38-297 (310)
134 3g2f_A Bone morphogenetic prot 100.0 2.4E-40 8.3E-45 351.3 20.0 265 409-712 19-319 (336)
135 3cc6_A Protein tyrosine kinase 100.0 2.9E-40 9.8E-45 341.5 19.8 250 409-711 18-273 (281)
136 3uzp_A CKI-delta, CKID, casein 100.0 8.1E-40 2.8E-44 340.6 23.4 261 409-712 15-281 (296)
137 3brb_A Proto-oncogene tyrosine 100.0 2.6E-40 8.8E-45 347.5 19.3 259 408-712 39-309 (313)
138 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-40 8E-45 349.9 19.1 259 409-711 47-322 (326)
139 1xbb_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 342.7 20.0 250 410-711 24-279 (291)
140 3lzb_A Epidermal growth factor 100.0 2.1E-40 7.1E-45 350.3 18.4 251 409-711 21-278 (327)
141 3is5_A Calcium-dependent prote 100.0 5.3E-40 1.8E-44 340.3 21.0 247 408-704 27-278 (285)
142 3ttj_A Mitogen-activated prote 100.0 6.6E-40 2.2E-44 362.3 23.0 251 409-704 68-355 (464)
143 3dbq_A Dual specificity protei 100.0 3E-40 1E-44 351.7 19.4 244 409-704 15-273 (343)
144 3kk8_A Calcium/calmodulin depe 100.0 8.7E-40 3E-44 338.3 22.4 244 409-704 12-261 (284)
145 2acx_A G protein-coupled recep 100.0 3E-40 1E-44 369.4 20.1 246 409-704 190-444 (576)
146 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.5E-40 1.9E-44 366.6 22.1 244 409-699 191-438 (543)
147 2qr7_A Ribosomal protein S6 ki 100.0 3.2E-40 1.1E-44 350.6 19.1 245 408-704 27-277 (342)
148 2jam_A Calcium/calmodulin-depe 100.0 7.7E-40 2.6E-44 342.4 21.6 244 408-704 14-261 (304)
149 2zmd_A Dual specificity protei 100.0 6.1E-40 2.1E-44 355.0 21.4 244 409-704 62-320 (390)
150 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.5E-40 3.3E-44 350.9 22.7 248 409-711 71-339 (365)
151 3cok_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 341.6 17.0 242 409-704 17-262 (278)
152 2xir_A Vascular endothelial gr 100.0 3.5E-40 1.2E-44 346.8 18.6 260 408-712 32-311 (316)
153 2rku_A Serine/threonine-protei 100.0 6.6E-40 2.3E-44 341.1 20.5 242 408-704 20-265 (294)
154 2yex_A Serine/threonine-protei 100.0 1.2E-39 4E-44 335.8 22.1 247 408-704 12-261 (276)
155 1p4o_A Insulin-like growth fac 100.0 5.4E-40 1.9E-44 346.4 20.0 258 408-711 30-299 (322)
156 3hko_A Calcium/calmodulin-depe 100.0 8.4E-40 2.9E-44 348.5 21.3 256 408-704 31-330 (345)
157 2owb_A Serine/threonine-protei 100.0 5.7E-40 1.9E-44 348.3 19.8 241 409-704 47-291 (335)
158 3dls_A PAS domain-containing s 100.0 1.4E-40 4.7E-45 352.8 14.9 236 408-705 29-275 (335)
159 2a19_B Interferon-induced, dou 100.0 3.1E-40 1.1E-44 341.5 17.1 243 408-712 16-275 (284)
160 3eqc_A Dual specificity mitoge 100.0 9.8E-40 3.3E-44 350.2 21.4 191 409-638 39-232 (360)
161 1t4h_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 340.5 19.4 241 409-704 32-282 (290)
162 2clq_A Mitogen-activated prote 100.0 9.3E-40 3.2E-44 340.0 20.5 247 409-704 28-278 (295)
163 2i1m_A Macrophage colony-stimu 100.0 3E-40 1E-44 350.1 17.0 259 408-711 51-326 (333)
164 4agu_A Cyclin-dependent kinase 100.0 6.1E-40 2.1E-44 344.2 19.1 257 409-704 9-284 (311)
165 3bhy_A Death-associated protei 100.0 1.6E-39 5.4E-44 336.2 21.9 250 408-709 10-272 (283)
166 2vd5_A DMPK protein; serine/th 100.0 3.1E-40 1.1E-44 358.3 17.2 247 409-704 67-327 (412)
167 3llt_A Serine/threonine kinase 100.0 2.1E-39 7.3E-44 347.5 23.1 190 409-638 41-261 (360)
168 3lm5_A Serine/threonine-protei 100.0 1.7E-39 5.7E-44 343.5 21.9 247 408-704 34-287 (327)
169 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.6E-40 2.6E-44 346.4 19.2 255 409-704 40-318 (329)
170 2buj_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44 346.1 17.0 265 409-712 35-307 (317)
171 1byg_A CSK, protein (C-termina 100.0 3.7E-40 1.3E-44 340.2 15.9 246 409-712 27-274 (278)
172 3g33_A Cell division protein k 100.0 1.5E-39 5E-44 340.9 20.7 257 409-704 15-296 (308)
173 2vgo_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 336.8 20.2 239 409-704 20-262 (284)
174 3i6u_A CDS1, serine/threonine- 100.0 5.8E-40 2E-44 358.7 18.1 245 408-704 140-399 (419)
175 2j7t_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 343.2 16.9 245 409-704 25-275 (302)
176 1vzo_A Ribosomal protein S6 ki 100.0 4.4E-40 1.5E-44 351.8 16.5 247 409-705 60-322 (355)
177 2h6d_A 5'-AMP-activated protei 100.0 2.3E-39 7.9E-44 333.7 20.9 240 409-704 17-261 (276)
178 2yfx_A Tyrosine-protein kinase 100.0 3E-39 1E-43 341.6 22.1 257 409-711 36-304 (327)
179 1ua2_A CAK, cell division prot 100.0 1.8E-39 6E-44 346.1 20.4 254 409-704 16-291 (346)
180 3ll6_A Cyclin G-associated kin 100.0 1.2E-39 4E-44 345.9 18.9 261 408-711 33-308 (337)
181 3mtl_A Cell division protein k 100.0 4.5E-40 1.6E-44 347.4 15.7 257 409-704 8-281 (324)
182 4aaa_A Cyclin-dependent kinase 100.0 2.1E-39 7.3E-44 343.3 20.7 258 409-704 31-306 (331)
183 1fvr_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 343.1 19.9 256 408-712 30-301 (327)
184 3mwu_A Calmodulin-domain prote 100.0 4E-39 1.4E-43 359.4 23.3 244 408-704 27-276 (486)
185 2y7j_A Phosphorylase B kinase 100.0 3.7E-39 1.3E-43 346.0 22.1 244 409-704 100-359 (365)
186 3oz6_A Mitogen-activated prote 100.0 1.9E-39 6.4E-44 351.6 19.6 212 409-638 15-233 (388)
187 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-39 5.6E-44 374.6 20.2 236 409-699 347-587 (674)
188 3nyv_A Calmodulin-domain prote 100.0 2.5E-39 8.6E-44 361.0 20.9 244 408-704 31-281 (484)
189 3lij_A Calcium/calmodulin depe 100.0 4.8E-39 1.6E-43 359.4 22.9 244 408-704 42-291 (494)
190 3a7i_A MST3 kinase, serine/thr 100.0 8.7E-39 3E-43 334.2 23.4 242 409-705 28-271 (303)
191 3byv_A Rhoptry kinase; malaria 100.0 2.3E-40 8E-45 357.2 11.8 238 409-704 79-359 (377)
192 3sv0_A Casein kinase I-like; t 100.0 6.6E-39 2.3E-43 354.5 23.5 259 409-711 13-278 (483)
193 3rgf_A Cyclin-dependent kinase 100.0 1.4E-39 4.9E-44 354.5 17.9 208 400-638 18-238 (405)
194 2r3i_A Cell division protein k 100.0 6.2E-39 2.1E-43 334.5 21.9 255 409-704 9-283 (299)
195 3nsz_A CK II alpha, casein kin 100.0 4.2E-39 1.4E-43 340.8 20.7 252 409-704 42-319 (330)
196 1cm8_A Phosphorylated MAP kina 100.0 2.8E-39 9.7E-44 347.0 19.5 250 409-704 31-307 (367)
197 3mi9_A Cell division protein k 100.0 4.8E-39 1.6E-43 343.5 20.9 261 409-704 23-311 (351)
198 3rp9_A Mitogen-activated prote 100.0 3.8E-39 1.3E-43 357.0 20.7 213 409-632 59-280 (458)
199 1u46_A ACK-1, activated CDC42 100.0 9.2E-40 3.1E-44 339.3 14.5 254 409-712 24-285 (291)
200 3com_A Serine/threonine-protei 100.0 6.4E-39 2.2E-43 336.9 20.8 243 409-704 35-278 (314)
201 2w5a_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 335.4 15.5 249 409-707 12-270 (279)
202 3kvw_A DYRK2, dual specificity 100.0 6.5E-39 2.2E-43 351.3 21.0 190 409-638 103-301 (429)
203 3q5i_A Protein kinase; CDPK, m 100.0 8.7E-39 3E-43 358.2 22.4 243 409-704 42-301 (504)
204 1x8b_A WEE1HU, WEE1-like prote 100.0 4.4E-39 1.5E-43 333.3 18.4 240 408-704 16-279 (289)
205 2xrw_A Mitogen-activated prote 100.0 7.8E-39 2.7E-43 344.4 20.5 250 409-704 31-318 (371)
206 3n9x_A Phosphotransferase; mal 100.0 9.1E-39 3.1E-43 350.8 21.2 212 409-636 32-252 (432)
207 3an0_A Dual specificity mitoge 100.0 7.9E-39 2.7E-43 340.3 20.1 246 409-704 57-310 (340)
208 2wtk_C Serine/threonine-protei 100.0 1.8E-38 6.2E-43 332.0 22.2 244 409-704 11-263 (305)
209 3fme_A Dual specificity mitoge 100.0 5.2E-39 1.8E-43 333.5 17.7 246 409-704 13-266 (290)
210 2y4i_B KSR2, HKSR2, kinase sup 100.0 5E-39 1.7E-43 338.5 17.4 254 409-712 39-303 (319)
211 2vwi_A Serine/threonine-protei 100.0 5.4E-39 1.8E-43 335.5 17.4 260 409-704 21-287 (303)
212 3q60_A ROP5B; pseudokinase, tr 100.0 8.4E-40 2.9E-44 352.1 11.3 248 408-704 67-352 (371)
213 1z57_A Dual specificity protei 100.0 1.3E-38 4.4E-43 338.0 20.2 254 409-704 20-328 (339)
214 1phk_A Phosphorylase kinase; g 100.0 1.6E-38 5.5E-43 331.2 20.5 244 409-704 23-283 (298)
215 2fst_X Mitogen-activated prote 100.0 7.5E-39 2.6E-43 343.4 17.9 250 409-704 35-311 (367)
216 1wak_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 346.3 19.4 256 409-704 43-391 (397)
217 4e7w_A Glycogen synthase kinas 100.0 8.4E-39 2.9E-43 346.7 18.3 256 409-704 46-321 (394)
218 2ycf_A Serine/threonine-protei 100.0 5E-39 1.7E-43 339.1 16.1 245 408-704 15-274 (322)
219 2j0j_A Focal adhesion kinase 1 100.0 1.7E-38 5.7E-43 365.1 21.6 251 408-711 395-651 (656)
220 2x7f_A TRAF2 and NCK-interacti 100.0 3.2E-38 1.1E-42 333.5 22.0 244 409-704 30-286 (326)
221 4exu_A Mitogen-activated prote 100.0 2.8E-38 9.7E-43 340.0 20.9 248 409-704 48-323 (371)
222 1j1b_A Glycogen synthase kinas 100.0 1.6E-38 5.4E-43 347.5 18.6 256 409-704 60-336 (420)
223 2vx3_A Dual specificity tyrosi 100.0 7.8E-38 2.7E-42 338.0 23.7 192 409-638 60-260 (382)
224 1zy4_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 328.2 20.9 258 408-704 11-283 (303)
225 2i6l_A Mitogen-activated prote 100.0 1.3E-38 4.5E-43 335.2 16.9 255 409-704 17-305 (320)
226 3pg1_A Mitogen-activated prote 100.0 1E-38 3.5E-43 342.5 16.3 256 409-704 28-316 (362)
227 2wei_A Calmodulin-domain prote 100.0 4.8E-38 1.6E-42 325.9 20.6 244 408-704 27-276 (287)
228 2pml_X PFPK7, Ser/Thr protein 100.0 1.5E-38 5.2E-43 339.2 17.3 255 409-704 37-322 (348)
229 3qyz_A Mitogen-activated prote 100.0 7.6E-38 2.6E-42 335.9 22.3 256 409-704 33-313 (364)
230 3cek_A Dual specificity protei 100.0 4.8E-38 1.7E-42 330.2 20.2 244 409-704 34-292 (313)
231 3eb0_A Putative uncharacterize 100.0 4.7E-38 1.6E-42 339.9 20.6 256 409-704 13-321 (383)
232 3e3p_A Protein kinase, putativ 100.0 2.8E-38 9.7E-43 338.7 18.1 258 409-704 29-314 (360)
233 1blx_A Cyclin-dependent kinase 100.0 3.5E-38 1.2E-42 333.1 18.6 257 409-704 17-296 (326)
234 2rio_A Serine/threonine-protei 100.0 1.9E-38 6.6E-43 348.3 17.1 252 409-704 21-295 (434)
235 3fhr_A MAP kinase-activated pr 100.0 2.1E-38 7.2E-43 336.3 16.6 245 408-704 34-287 (336)
236 3coi_A Mitogen-activated prote 100.0 1.1E-37 3.7E-42 333.3 21.8 249 409-704 30-305 (353)
237 2eu9_A Dual specificity protei 100.0 6.8E-38 2.3E-42 334.8 20.2 254 409-704 25-333 (355)
238 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-37 4.3E-42 332.7 21.5 264 409-704 17-305 (353)
239 3p23_A Serine/threonine-protei 100.0 1E-37 3.5E-42 341.6 19.1 244 409-704 30-283 (432)
240 3aln_A Dual specificity mitoge 100.0 1.1E-37 3.9E-42 329.4 18.2 250 409-704 28-285 (327)
241 1q8y_A SR protein kinase; tran 100.0 7.4E-38 2.5E-42 337.1 16.9 256 409-704 25-333 (373)
242 2dyl_A Dual specificity mitoge 100.0 4.6E-37 1.6E-41 323.2 19.5 244 409-704 31-283 (318)
243 3a99_A Proto-oncogene serine/t 100.0 4.3E-38 1.5E-42 331.6 11.3 233 409-704 49-293 (320)
244 2iwi_A Serine/threonine-protei 100.0 8.2E-38 2.8E-42 328.2 13.4 233 409-704 37-283 (312)
245 3uqc_A Probable conserved tran 100.0 7.4E-37 2.5E-41 316.5 18.6 226 409-712 37-266 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 2.6E-37 8.7E-42 349.0 14.0 263 409-710 20-308 (676)
247 2pzi_A Probable serine/threoni 100.0 1.1E-36 3.6E-41 353.4 19.2 233 409-710 86-327 (681)
248 1ogq_A PGIP-2, polygalacturona 100.0 1E-36 3.6E-41 319.7 16.4 253 19-276 2-310 (313)
249 3m2w_A MAP kinase-activated pr 100.0 1.6E-35 5.4E-40 308.9 20.4 223 409-704 24-256 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 3.5E-36 1.2E-40 328.1 14.2 237 409-703 84-362 (413)
251 2vuw_A Serine/threonine-protei 100.0 5.8E-36 2E-40 317.6 10.9 236 408-703 25-329 (336)
252 3rgz_A Protein brassinosteroid 100.0 2.1E-31 7E-36 313.5 16.8 230 16-253 5-266 (768)
253 4fcg_A Uncharacterized protein 100.0 1.8E-31 6.1E-36 281.6 11.2 238 17-261 21-280 (328)
254 4ecn_A Leucine-rich repeat pro 100.0 6.7E-31 2.3E-35 307.9 14.5 240 20-271 266-632 (876)
255 3rgz_A Protein brassinosteroid 100.0 1.1E-30 3.9E-35 307.2 15.7 216 64-282 466-751 (768)
256 4eco_A Uncharacterized protein 100.0 4.8E-31 1.6E-35 303.5 12.2 244 21-271 28-390 (636)
257 4azs_A Methyltransferase WBDD; 100.0 1.1E-30 3.9E-35 294.5 6.0 185 411-636 242-438 (569)
258 2o6q_A Variable lymphocyte rec 99.9 2.2E-25 7.7E-30 228.3 19.0 218 52-274 3-222 (270)
259 3en9_A Glycoprotease, O-sialog 99.9 1.1E-26 3.7E-31 260.6 6.0 188 408-636 341-538 (540)
260 1ozn_A Reticulon 4 receptor; N 99.9 7.6E-25 2.6E-29 226.3 15.8 209 64-274 32-242 (285)
261 4fcg_A Uncharacterized protein 99.9 6.3E-25 2.2E-29 231.5 13.8 192 63-260 103-303 (328)
262 3m19_A Variable lymphocyte rec 99.9 2.1E-24 7.3E-29 218.5 16.5 195 52-252 3-197 (251)
263 2z66_A Variable lymphocyte rec 99.9 1.3E-24 4.5E-29 226.9 13.9 200 51-253 4-218 (306)
264 3zyi_A Leucine-rich repeat-con 99.9 9.7E-24 3.3E-28 232.9 17.8 216 56-275 56-308 (452)
265 1ogq_A PGIP-2, polygalacturona 99.9 1.7E-24 5.9E-29 226.7 10.1 183 64-250 101-308 (313)
266 3zyj_A Leucine-rich repeat-con 99.9 2.4E-23 8.2E-28 228.9 18.3 216 56-275 45-297 (440)
267 2o6q_A Variable lymphocyte rec 99.9 3.2E-23 1.1E-27 212.2 18.0 204 45-251 6-222 (270)
268 2z62_A TOLL-like receptor 4, v 99.9 2.4E-23 8E-28 214.0 17.0 208 65-274 29-241 (276)
269 3v47_A TOLL-like receptor 5B a 99.9 2.4E-23 8.3E-28 229.9 15.6 157 52-208 6-177 (455)
270 1p9a_G Platelet glycoprotein I 99.9 7.6E-23 2.6E-27 211.5 17.6 203 64-274 10-212 (290)
271 2z80_A TOLL-like receptor 2, v 99.9 1.3E-23 4.6E-28 224.0 11.2 194 51-248 27-236 (353)
272 1ozn_A Reticulon 4 receptor; N 99.9 7.4E-23 2.5E-27 211.3 14.7 188 63-252 55-243 (285)
273 1xku_A Decorin; proteoglycan, 99.9 4.7E-22 1.6E-26 209.9 20.8 192 52-251 29-233 (330)
274 2ft3_A Biglycan; proteoglycan, 99.9 3.7E-22 1.3E-26 210.9 20.0 192 53-253 32-236 (332)
275 1zar_A RIO2 kinase; serine kin 99.9 1.2E-23 4.1E-28 216.3 7.9 128 409-557 96-241 (282)
276 1wwl_A Monocyte differentiatio 99.9 1.6E-23 5.4E-28 219.3 8.1 184 63-252 94-291 (312)
277 2xwt_C Thyrotropin receptor; s 99.9 1E-22 3.5E-27 204.5 13.4 184 64-252 31-223 (239)
278 2o6s_A Variable lymphocyte rec 99.9 1.5E-22 5E-27 198.8 14.2 183 51-255 4-186 (208)
279 3v47_A TOLL-like receptor 5B a 99.9 1.4E-22 4.7E-27 223.8 15.1 190 64-255 79-368 (455)
280 3rfs_A Internalin B, repeat mo 99.9 8E-22 2.7E-26 202.1 18.0 183 64-252 41-223 (272)
281 3oja_B Anopheles plasmodium-re 99.9 2.2E-22 7.5E-27 229.9 14.6 132 66-198 53-184 (597)
282 2id5_A Lingo-1, leucine rich r 99.9 3.5E-22 1.2E-26 222.0 15.0 197 55-253 12-219 (477)
283 4eco_A Uncharacterized protein 99.9 7.5E-23 2.6E-27 235.2 9.0 187 63-255 205-423 (636)
284 3vq2_A TLR4, TOLL-like recepto 99.9 2.2E-22 7.4E-27 230.7 12.5 209 64-275 350-563 (606)
285 1p9a_G Platelet glycoprotein I 99.9 1.4E-21 4.9E-26 201.9 17.4 180 64-249 31-210 (290)
286 3oja_A Leucine-rich immune mol 99.9 9.4E-23 3.2E-27 226.6 8.8 202 65-272 35-252 (487)
287 2z81_A CD282 antigen, TOLL-lik 99.9 1.8E-22 6E-27 228.6 11.0 194 53-249 3-211 (549)
288 3j0a_A TOLL-like receptor 5; m 99.9 4.4E-22 1.5E-26 236.5 14.9 210 65-275 267-565 (844)
289 3rfs_A Internalin B, repeat mo 99.9 1E-21 3.4E-26 201.3 15.3 182 63-255 62-243 (272)
290 4ecn_A Leucine-rich repeat pro 99.9 2.2E-22 7.4E-27 235.9 10.5 186 80-272 440-658 (876)
291 3o6n_A APL1; leucine-rich repe 99.9 8.5E-22 2.9E-26 213.0 14.2 132 65-198 46-178 (390)
292 4glp_A Monocyte differentiatio 99.9 4.6E-22 1.6E-26 208.0 11.7 180 65-249 92-287 (310)
293 3t6q_A CD180 antigen; protein- 99.9 8.9E-22 3E-26 225.6 14.5 207 65-274 351-564 (606)
294 2z66_A Variable lymphocyte rec 99.9 7.4E-22 2.5E-26 206.0 12.1 208 63-273 51-264 (306)
295 2z62_A TOLL-like receptor 4, v 99.9 2.1E-21 7.3E-26 199.3 15.4 188 63-253 51-243 (276)
296 3m19_A Variable lymphocyte rec 99.9 4E-21 1.4E-25 194.4 16.1 169 55-225 15-194 (251)
297 1wwl_A Monocyte differentiatio 99.9 2.8E-22 9.7E-27 209.8 7.8 180 63-249 120-311 (312)
298 2id5_A Lingo-1, leucine rich r 99.9 1.6E-21 5.4E-26 216.8 13.6 209 64-274 104-337 (477)
299 3oja_B Anopheles plasmodium-re 99.9 2.2E-21 7.6E-26 221.5 14.6 185 64-252 75-296 (597)
300 1ziw_A TOLL-like receptor 3; i 99.8 3.4E-21 1.2E-25 223.8 15.7 209 64-274 381-626 (680)
301 2ft3_A Biglycan; proteoglycan, 99.8 1.2E-20 4.2E-25 199.2 17.2 201 63-273 77-279 (332)
302 3j0a_A TOLL-like receptor 5; m 99.8 4.1E-21 1.4E-25 228.2 14.0 200 54-254 14-224 (844)
303 3vq2_A TLR4, TOLL-like recepto 99.8 5E-21 1.7E-25 219.3 14.2 183 64-248 32-218 (606)
304 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.7E-21 1.3E-25 218.3 12.6 162 109-274 350-514 (562)
305 3o6n_A APL1; leucine-rich repe 99.8 1E-20 3.5E-25 204.5 14.8 184 64-251 69-289 (390)
306 3cvr_A Invasion plasmid antige 99.8 5.1E-21 1.7E-25 214.5 12.8 183 43-255 33-228 (571)
307 4b8c_D Glucose-repressible alc 99.8 5.7E-22 1.9E-26 230.3 4.5 229 20-256 129-363 (727)
308 2z7x_B TOLL-like receptor 1, v 99.8 3.3E-21 1.1E-25 216.6 10.4 204 65-274 248-485 (520)
309 3o53_A Protein LRIM1, AGAP0063 99.8 2.9E-21 9.9E-26 202.5 8.6 194 64-271 58-251 (317)
310 1xku_A Decorin; proteoglycan, 99.8 3.7E-20 1.3E-24 195.3 16.9 205 63-276 75-281 (330)
311 3t6q_A CD180 antigen; protein- 99.8 1.9E-20 6.5E-25 214.5 15.8 182 64-248 278-463 (606)
312 3zyj_A Leucine-rich repeat-con 99.8 2.8E-20 9.6E-25 204.4 15.4 182 64-249 88-294 (440)
313 2o6s_A Variable lymphocyte rec 99.8 5.2E-20 1.8E-24 180.5 15.4 173 54-235 14-190 (208)
314 1ziw_A TOLL-like receptor 3; i 99.8 8.2E-20 2.8E-24 212.2 19.3 188 63-252 352-554 (680)
315 3e6j_A Variable lymphocyte rec 99.8 6.4E-20 2.2E-24 182.7 15.7 159 51-225 16-174 (229)
316 3zyi_A Leucine-rich repeat-con 99.8 3.9E-20 1.3E-24 204.0 15.2 184 63-250 98-306 (452)
317 2z63_A TOLL-like receptor 4, v 99.8 2.5E-20 8.4E-25 211.9 13.0 205 65-274 326-535 (570)
318 2z63_A TOLL-like receptor 4, v 99.8 1.5E-20 5.1E-25 213.7 11.1 189 63-254 346-538 (570)
319 2z7x_B TOLL-like receptor 1, v 99.8 5.1E-20 1.7E-24 206.9 13.5 137 64-207 21-162 (520)
320 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.7E-20 1.3E-24 210.0 12.4 162 85-252 350-515 (562)
321 2v70_A SLIT-2, SLIT homolog 2 99.8 9.9E-20 3.4E-24 180.1 13.5 153 68-225 15-168 (220)
322 4glp_A Monocyte differentiatio 99.8 2.2E-20 7.5E-25 195.2 9.2 179 63-248 116-308 (310)
323 2z80_A TOLL-like receptor 2, v 99.8 3.6E-20 1.2E-24 197.4 10.8 187 57-250 26-214 (353)
324 4g8a_A TOLL-like receptor 4; l 99.8 5.7E-20 1.9E-24 211.4 13.1 205 40-246 10-236 (635)
325 2v9t_B SLIT homolog 2 protein 99.8 1.2E-19 4E-24 179.6 13.4 157 52-223 9-165 (220)
326 2v9t_B SLIT homolog 2 protein 99.8 1.1E-19 3.8E-24 179.7 12.9 154 91-249 14-167 (220)
327 3oja_A Leucine-rich immune mol 99.8 4.3E-21 1.5E-25 213.1 2.3 181 63-251 57-255 (487)
328 2v70_A SLIT-2, SLIT homolog 2 99.8 1.5E-19 5.1E-24 178.8 13.1 156 91-251 14-170 (220)
329 1h6u_A Internalin H; cell adhe 99.8 2.5E-19 8.4E-24 186.9 13.5 172 64-251 41-212 (308)
330 4ay9_X Follicle-stimulating ho 99.8 2E-19 6.8E-24 191.3 12.8 199 52-253 7-221 (350)
331 1zth_A RIO1 serine protein kin 99.8 1E-19 3.6E-24 184.5 10.2 132 409-558 53-219 (258)
332 2xot_A Amphoterin-induced prot 99.8 8E-20 2.7E-24 195.2 9.7 174 69-248 23-203 (361)
333 3e6j_A Variable lymphocyte rec 99.8 5.6E-19 1.9E-23 175.8 14.3 156 90-251 21-176 (229)
334 2xwt_C Thyrotropin receptor; s 99.8 2.1E-19 7.1E-24 180.3 10.8 175 63-245 54-237 (239)
335 2z81_A CD282 antigen, TOLL-lik 99.8 1.6E-19 5.5E-24 204.2 11.0 184 59-249 2-187 (549)
336 1h6u_A Internalin H; cell adhe 99.8 4.1E-19 1.4E-23 185.2 13.0 172 63-250 62-233 (308)
337 3cvr_A Invasion plasmid antige 99.8 5.1E-19 1.8E-23 198.3 12.7 164 64-254 80-250 (571)
338 1h6t_A Internalin B; cell adhe 99.8 1.3E-18 4.3E-23 179.9 13.5 171 64-250 46-216 (291)
339 3o53_A Protein LRIM1, AGAP0063 99.8 2.3E-19 8E-24 188.0 7.6 176 63-252 79-256 (317)
340 2xot_A Amphoterin-induced prot 99.8 5.2E-19 1.8E-23 188.9 10.3 179 91-274 21-206 (361)
341 3bz5_A Internalin-J, INLJ; leu 99.8 1.1E-17 3.6E-22 184.2 19.0 162 65-248 65-226 (457)
342 3bz5_A Internalin-J, INLJ; leu 99.8 1.2E-17 4.1E-22 183.8 18.5 166 63-249 41-206 (457)
343 4g8a_A TOLL-like receptor 4; l 99.8 2.4E-18 8.2E-23 197.8 13.3 207 65-274 372-584 (635)
344 1m9s_A Internalin B; cell inva 99.8 4.3E-18 1.5E-22 192.9 14.7 174 63-252 42-215 (605)
345 1o6v_A Internalin A; bacterial 99.7 4.1E-18 1.4E-22 188.5 13.9 171 65-251 200-370 (466)
346 4b8c_D Glucose-repressible alc 99.7 3.6E-19 1.2E-23 206.8 5.4 155 79-244 215-369 (727)
347 4fmz_A Internalin; leucine ric 99.7 4.1E-18 1.4E-22 180.8 12.3 174 65-251 133-328 (347)
348 4ezg_A Putative uncharacterize 99.7 2.1E-18 7.3E-23 167.4 8.5 128 65-198 45-172 (197)
349 1w8a_A SLIT protein; signaling 99.7 6.2E-18 2.1E-22 163.4 11.4 177 52-248 6-184 (192)
350 1o6v_A Internalin A; bacterial 99.7 8.5E-18 2.9E-22 186.0 13.5 172 63-250 220-391 (466)
351 4fmz_A Internalin; leucine ric 99.7 6.7E-18 2.3E-22 179.2 11.6 170 64-247 177-346 (347)
352 4ezg_A Putative uncharacterize 99.7 7.8E-18 2.7E-22 163.4 10.5 156 84-248 40-195 (197)
353 1xeu_A Internalin C; cellular 99.7 4.2E-18 1.4E-22 173.2 8.7 168 66-250 21-188 (263)
354 1w8a_A SLIT protein; signaling 99.7 7.5E-18 2.6E-22 162.8 8.7 132 91-227 11-143 (192)
355 2ast_B S-phase kinase-associat 99.7 3.2E-19 1.1E-23 188.5 -2.4 179 64-245 70-258 (336)
356 2ca6_A RAN GTPase-activating p 99.7 1.7E-19 5.8E-24 194.6 -4.9 184 63-248 59-288 (386)
357 1jl5_A Outer protein YOPM; leu 99.7 4.2E-17 1.4E-21 179.3 14.0 154 65-248 216-371 (454)
358 3g06_A SSPH2 (leucine-rich rep 99.7 1.2E-17 4.2E-22 189.4 9.9 141 41-203 10-158 (622)
359 1h6t_A Internalin B; cell adhe 99.7 1.9E-17 6.6E-22 171.0 10.4 163 71-249 31-193 (291)
360 1jl5_A Outer protein YOPM; leu 99.7 6.6E-18 2.3E-22 185.6 6.7 164 64-248 11-187 (454)
361 2o6r_A Variable lymphocyte rec 99.7 5.6E-17 1.9E-21 154.4 11.4 137 52-202 5-141 (177)
362 2ast_B S-phase kinase-associat 99.7 1.5E-19 5E-24 191.1 -7.6 192 55-252 38-241 (336)
363 1dce_A Protein (RAB geranylger 99.7 6.3E-20 2.1E-24 206.7 -11.8 178 68-254 353-553 (567)
364 2ca6_A RAN GTPase-activating p 99.7 1.3E-18 4.3E-23 187.7 -1.5 185 63-249 31-259 (386)
365 1m9s_A Internalin B; cell inva 99.7 3.8E-17 1.3E-21 185.2 10.5 165 69-249 26-190 (605)
366 3g06_A SSPH2 (leucine-rich rep 99.7 1.8E-16 6.3E-21 179.8 13.3 167 63-253 80-279 (622)
367 3goz_A Leucine-rich repeat-con 99.7 3.4E-18 1.2E-22 182.7 -0.9 108 66-173 24-151 (362)
368 3goz_A Leucine-rich repeat-con 99.7 2.4E-18 8.1E-23 183.9 -2.4 179 69-248 3-210 (362)
369 2ell_A Acidic leucine-rich nuc 99.7 1.3E-16 4.5E-21 150.4 9.8 107 88-198 24-133 (168)
370 2wfh_A SLIT homolog 2 protein 99.7 3.8E-16 1.3E-20 150.9 12.8 125 69-198 15-139 (193)
371 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.9E-21 150.8 8.3 137 64-204 24-165 (168)
372 4gyi_A RIO2 kinase; protein ki 99.6 2.9E-16 9.9E-21 165.4 10.4 134 408-558 100-265 (397)
373 1xeu_A Internalin C; cellular 99.6 9.3E-16 3.2E-20 155.8 12.0 148 63-225 40-187 (263)
374 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 5E-20 146.7 12.4 127 91-223 13-139 (193)
375 2je0_A Acidic leucine-rich nuc 99.6 2.2E-16 7.4E-21 145.8 6.1 108 88-198 17-126 (149)
376 4ay9_X Follicle-stimulating ho 99.6 2.4E-15 8.2E-20 159.7 15.0 206 59-273 7-217 (350)
377 2je0_A Acidic leucine-rich nuc 99.6 2.7E-16 9.1E-21 145.1 6.1 126 113-242 18-148 (149)
378 2o6r_A Variable lymphocyte rec 99.6 1.8E-15 6.3E-20 143.9 11.7 131 90-225 9-139 (177)
379 1dce_A Protein (RAB geranylger 99.6 1E-16 3.5E-21 180.5 -0.6 158 76-241 397-567 (567)
380 1ds9_A Outer arm dynein; leuci 99.6 1.5E-17 5.3E-22 161.5 -8.8 155 84-247 14-185 (198)
381 1a9n_A U2A', U2A'; complex (nu 99.5 5.6E-15 1.9E-19 140.4 8.0 132 83-222 14-152 (176)
382 1z7x_W Ribonuclease inhibitor; 99.5 7.2E-17 2.5E-21 178.2 -6.4 184 64-248 170-384 (461)
383 1a9n_A U2A', U2A'; complex (nu 99.5 3.8E-15 1.3E-19 141.5 5.4 134 106-247 13-153 (176)
384 1ds9_A Outer arm dynein; leuci 99.5 2.8E-17 9.5E-22 159.6 -10.4 149 65-223 19-185 (198)
385 1z7x_W Ribonuclease inhibitor; 99.5 4E-16 1.4E-20 172.2 -3.5 181 65-247 86-297 (461)
386 3g39_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 133.4 10.9 103 69-174 14-116 (170)
387 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 130.5 11.2 106 90-199 11-116 (170)
388 2r9u_A Variable lymphocyte rec 99.5 2.6E-13 8.8E-18 128.5 11.9 104 67-173 15-118 (174)
389 2r9u_A Variable lymphocyte rec 99.5 2E-13 6.7E-18 129.3 11.1 104 91-198 15-118 (174)
390 2ifg_A High affinity nerve gro 99.5 1.5E-13 5.2E-18 145.6 11.4 110 53-174 7-117 (347)
391 2ifg_A High affinity nerve gro 99.3 3.6E-12 1.2E-16 134.9 9.7 105 91-199 11-117 (347)
392 3sb4_A Hypothetical leucine ri 99.3 3.4E-12 1.2E-16 134.1 9.4 188 64-255 49-318 (329)
393 3tm0_A Aminoglycoside 3'-phosp 99.2 1.9E-11 6.6E-16 123.8 10.0 135 410-556 21-212 (263)
394 3sb4_A Hypothetical leucine ri 99.2 1.6E-11 5.6E-16 128.8 9.2 186 65-255 26-294 (329)
395 3ogk_B Coronatine-insensitive 99.2 1.8E-13 6.2E-18 155.9 -8.5 105 64-168 293-411 (592)
396 3un9_A NLR family member X1; l 99.2 1.9E-13 6.6E-18 145.7 -8.2 159 88-248 72-253 (372)
397 3un9_A NLR family member X1; l 99.2 1.2E-13 4E-18 147.3 -10.7 167 64-232 72-261 (372)
398 1nd4_A Aminoglycoside 3'-phosp 99.2 6.5E-11 2.2E-15 119.5 9.8 130 411-557 27-214 (264)
399 3ogk_B Coronatine-insensitive 99.1 2.8E-12 9.5E-17 146.1 -2.7 174 65-242 165-350 (592)
400 3dxp_A Putative acyl-COA dehyd 99.0 7.9E-10 2.7E-14 117.4 10.3 139 410-557 45-248 (359)
401 4fdw_A Leucine rich hypothetic 98.9 4E-09 1.4E-13 113.3 13.0 167 66-241 159-330 (401)
402 3rw6_A Nuclear RNA export fact 98.9 4.8E-11 1.6E-15 119.7 -3.9 21 53-73 77-99 (267)
403 2p1m_B Transport inhibitor res 98.9 9.9E-12 3.4E-16 141.5 -11.1 180 64-247 289-494 (594)
404 3sg8_A APH(2'')-ID; antibiotic 98.9 1.2E-09 4.2E-14 113.1 5.2 134 410-557 27-223 (304)
405 4fdw_A Leucine rich hypothetic 98.9 1.1E-08 3.6E-13 110.0 12.6 177 64-249 180-360 (401)
406 2ra8_A Uncharacterized protein 98.8 3.8E-10 1.3E-14 119.2 0.6 181 64-248 107-321 (362)
407 2p1m_B Transport inhibitor res 98.8 1.3E-10 4.4E-15 132.2 -4.4 128 64-193 105-243 (594)
408 2ra8_A Uncharacterized protein 98.6 2.4E-09 8.2E-14 113.1 -1.7 176 64-245 139-341 (362)
409 3r70_A Aminoglycoside phosphot 98.6 1.6E-07 5.6E-12 97.7 12.0 131 409-557 43-237 (320)
410 3rw6_A Nuclear RNA export fact 98.5 2.6E-08 8.9E-13 99.8 2.3 106 84-191 137-257 (267)
411 3d1u_A Putative fructosamine-3 98.5 4.1E-07 1.4E-11 92.9 10.2 74 409-486 21-97 (288)
412 3tdw_A Gentamicin resistance p 98.4 1.1E-06 3.8E-11 90.7 12.5 134 410-557 26-224 (306)
413 1io0_A Tropomodulin; LRR prote 98.4 1.8E-08 6.1E-13 96.0 -2.5 120 79-198 27-164 (185)
414 4gkh_A Aminoglycoside 3'-phosp 98.3 1.8E-06 6E-11 87.4 11.3 134 411-557 32-223 (272)
415 1io0_A Tropomodulin; LRR prote 98.3 1.2E-07 4E-12 90.2 0.9 111 63-173 35-164 (185)
416 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.5E-06 8.6E-11 90.2 10.7 73 409-487 47-122 (362)
417 3ats_A Putative uncharacterize 98.3 1.2E-06 4E-11 92.7 7.9 79 410-488 27-122 (357)
418 2olc_A MTR kinase, methylthior 97.9 3.1E-05 1E-09 83.0 10.2 74 409-484 36-120 (397)
419 2q83_A YTAA protein; 2635576, 97.9 6.4E-05 2.2E-09 78.5 11.9 142 410-556 39-251 (346)
420 3f7w_A Putative fructosamine-3 97.6 0.00028 9.4E-09 71.8 11.5 73 410-486 22-97 (288)
421 3jr1_A Putative fructosamine-3 97.6 0.00023 7.8E-09 73.2 10.4 139 410-553 43-232 (312)
422 2pyw_A Uncharacterized protein 97.5 0.00023 7.9E-09 76.7 10.2 72 409-483 40-122 (420)
423 4fs7_A Uncharacterized protein 97.4 0.0003 1E-08 75.1 9.4 171 64-244 162-353 (394)
424 4fs7_A Uncharacterized protein 97.4 0.00053 1.8E-08 73.2 11.2 152 83-244 225-376 (394)
425 4gt6_A Cell surface protein; l 97.4 0.00049 1.7E-08 73.5 10.3 129 107-245 260-389 (394)
426 4gt6_A Cell surface protein; l 97.3 0.0015 5E-08 69.7 12.5 106 133-244 262-367 (394)
427 3dxq_A Choline/ethanolamine ki 97.3 0.00052 1.8E-08 70.2 8.5 69 410-486 25-95 (301)
428 4h09_A Hypothetical leucine ri 97.2 0.002 6.7E-08 68.2 12.2 153 84-243 190-342 (379)
429 3e4g_A ATP synthase subunit S, 97.2 6.6E-05 2.2E-09 69.6 0.5 82 89-170 62-149 (176)
430 1nw1_A Choline kinase (49.2 KD 97.1 0.00092 3.2E-08 72.1 9.0 70 410-485 80-158 (429)
431 1zyl_A Hypothetical protein YI 97.1 0.0033 1.1E-07 65.0 12.5 144 410-557 33-223 (328)
432 3csv_A Aminoglycoside phosphot 97.0 0.0022 7.5E-08 66.5 10.7 142 410-557 25-217 (333)
433 2ppq_A HSK, HK, homoserine kin 97.0 0.00058 2E-08 70.5 6.2 144 410-556 29-216 (322)
434 4h09_A Hypothetical leucine ri 97.0 0.0033 1.1E-07 66.5 11.9 164 75-244 145-320 (379)
435 3e4g_A ATP synthase subunit S, 97.0 0.00022 7.5E-09 66.1 2.2 84 64-147 61-150 (176)
436 3feg_A Choline/ethanolamine ki 97.0 0.0017 5.9E-08 68.4 9.2 143 410-557 57-254 (379)
437 2qg7_A Ethanolamine kinase PV0 97.0 0.0031 1.1E-07 68.3 11.2 72 410-486 115-188 (458)
438 1pgv_A TMD-1, tropomodulin TMD 96.9 5.4E-05 1.8E-09 71.6 -2.8 87 84-170 37-136 (197)
439 3rfe_A Platelet glycoprotein I 96.8 0.002 6.8E-08 56.8 6.8 37 137-173 32-68 (130)
440 3rfe_A Platelet glycoprotein I 96.8 0.0014 4.9E-08 57.7 5.6 57 139-198 11-68 (130)
441 3c5i_A Choline kinase; choline 96.7 0.0024 8.2E-08 67.3 7.7 71 410-485 40-120 (369)
442 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00047 1.6E-08 65.1 1.8 112 61-172 38-169 (197)
443 3i1a_A Spectinomycin phosphotr 96.6 0.0055 1.9E-07 63.7 9.7 31 527-557 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.3 0.0083 2.9E-07 63.5 8.6 144 410-557 59-280 (401)
445 2yle_A Protein spire homolog 1 95.9 0.077 2.6E-06 50.4 11.9 100 484-632 33-132 (229)
446 3mes_A Choline kinase; malaria 95.3 0.022 7.4E-07 60.9 6.6 142 410-557 77-291 (424)
447 3g15_A CK, chetk-alpha, cholin 90.4 0.65 2.2E-05 49.1 8.7 30 528-557 245-280 (401)
448 2k1k_A Ephrin type-A receptor 89.3 0.034 1.2E-06 36.6 -1.5 30 315-344 6-35 (38)
449 4ann_A ESSB; membrane protein, 88.5 2.3 7.8E-05 40.2 9.8 83 457-555 43-126 (215)
450 4ano_A ESSB; membrane protein, 84.1 2.3 8E-05 40.3 7.4 83 457-555 48-131 (219)
451 3cxl_A N-chimerin; SH2, RHO-GA 78.3 0.23 8E-06 53.6 -2.1 54 416-469 152-214 (463)
452 2ks1_B Epidermal growth factor 70.4 0.5 1.7E-05 32.1 -1.2 7 326-332 17-23 (44)
453 2l2t_A Receptor tyrosine-prote 69.7 0.47 1.6E-05 32.1 -1.4 16 322-337 12-27 (44)
454 2jwa_A Receptor tyrosine-prote 46.3 1.7 5.9E-05 29.4 -1.9 7 322-328 14-20 (44)
455 2l34_A TYRO protein tyrosine k 32.7 4.4 0.00015 25.6 -1.5 26 317-342 4-29 (33)
456 1cja_A Protein (actin-fragmin 23.3 1.2E+02 0.0043 30.4 6.2 131 414-557 79-237 (342)
457 2lz0_A Uncharacterized protein 22.5 1.9E+02 0.0064 23.1 6.2 48 74-122 6-53 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.5e-54 Score=453.22 Aligned_cols=258 Identities=23% Similarity=0.375 Sum_probs=204.5
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|||||+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~ 126 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 126 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence 47999999999999875 478999999988777777889999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCC---------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 483 NGSLATALHGKPGM---------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 483 ~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
+|+|.++++..... ....+++|.++++|+.|||+||+|||+ ++||||||||+|||+++++++||+|||
T Consensus 127 ~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEcccc
Confidence 99999999765321 112469999999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-C
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-G 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G 632 (714)
+|+....... ........||+.|||||++.+..++.++|||||||++|||+| |
T Consensus 204 la~~~~~~~~--------------------------~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G 257 (329)
T 4aoj_A 204 MSRDIYSTDY--------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 257 (329)
T ss_dssp ------------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cceeccCCCc--------------------------ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCC
Confidence 9986543211 112234568999999999999999999999999999999999 8
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+.||.... .. +.+........ +..+.. ...++.+|+.+||+.||++||||+||++.|+++...
T Consensus 258 ~~Pf~~~~--~~---~~~~~i~~g~~-------~~~p~~-----~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 258 KQPWYQLS--NT---EAIDCITQGRE-------LERPRA-----CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCTTCSSC--HH---HHHHHHHHTCC-------CCCCTT-----CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCC--HH---HHHHHHHcCCC-------CCCccc-----ccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 99995432 22 22222222211 111111 223688999999999999999999999999998754
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.4e-55 Score=450.98 Aligned_cols=259 Identities=24% Similarity=0.367 Sum_probs=208.6
Q ss_pred cccccccCceEEEEEEEC------CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 357999999999999874 47889999998877666788999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCC-------CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 482 PNGSLATALHGKPG-------MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 482 ~~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
++|+|.++|+.... ......++|.++++|+.|||+||+|||+ ++||||||||+|||+++++++||+|||+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCccc
Confidence 99999999975420 1112469999999999999999999999 8999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GR 633 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~ 633 (714)
|+....... ........||+.|||||++.+..|+.++|||||||++|||+| |+
T Consensus 175 a~~~~~~~~--------------------------~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~ 228 (299)
T 4asz_A 175 SRDVYSTDY--------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228 (299)
T ss_dssp HHHHTGGGC--------------------------EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ceecCCCCc--------------------------eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 987643211 112223457889999999999999999999999999999999 89
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.||.... .. +.+........ +..+.. ...++.+++.+||+.||++||||+||++.|+++..+
T Consensus 229 ~Pf~~~~--~~---~~~~~i~~~~~-------~~~p~~-----~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 229 QPWYQLS--NN---EVIECITQGRV-------LQRPRT-----CPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CTTTTSC--HH---HHHHHHHHTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCC--HH---HHHHHHHcCCC-------CCCCcc-----chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 9995432 22 22222222211 111111 223688999999999999999999999999998654
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.1e-54 Score=449.57 Aligned_cols=257 Identities=26% Similarity=0.345 Sum_probs=206.5
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+.+..++|||||
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~ 111 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcC
Confidence 47999999999999973 46899999997653 334578999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcc
Q 005102 482 PNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 551 (714)
++|||.++|...... .....++|.++++|+.|||+||+|||+ ++||||||||+|||+++++++||+|
T Consensus 112 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEECC
Confidence 999999999754311 112468999999999999999999999 8999999999999999999999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
||+|+....... ........||+.|||||++.++.|+.++|||||||++|||+|
T Consensus 189 FGlar~~~~~~~--------------------------~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t 242 (308)
T 4gt4_A 189 LGLFREVYAADY--------------------------YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242 (308)
T ss_dssp SCCBCGGGGGGC--------------------------BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccceeccCCCc--------------------------eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHh
Confidence 999987643211 112334567999999999999999999999999999999999
Q ss_pred -CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 632 -GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 632 -G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
|+.||.... ..++. .... .+... + .+. .+...+.+++.+||+.||++||||+||++.|++..
T Consensus 243 ~g~~Pf~~~~--~~~~~---~~i~-~~~~~-----~-~p~-----~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 243 YGLQPYCGYS--NQDVV---EMIR-NRQVL-----P-CPD-----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TTCCTTTTCC--HHHHH---HHHH-TTCCC-----C-CCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCCCC--HHHHH---HHHH-cCCCC-----C-Ccc-----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 899995332 22222 2222 22111 1 111 12346889999999999999999999999999864
Q ss_pred c
Q 005102 711 V 711 (714)
Q Consensus 711 ~ 711 (714)
.
T Consensus 306 n 306 (308)
T 4gt4_A 306 N 306 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-54 Score=443.52 Aligned_cols=256 Identities=26% Similarity=0.418 Sum_probs=199.7
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||+||+|++++ .||||+++.. .....+.|.+|+++|++++|||||+++|++. .+..++|||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCC
Confidence 3579999999999999753 6999998754 3344578999999999999999999999885 467899999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.++|+... .+++|.++++|+.|||+||+|||+ ++||||||||+|||+++++++||+|||+|+.......
T Consensus 118 L~~~l~~~~-----~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-- 187 (307)
T 3omv_A 118 LYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-- 187 (307)
T ss_dssp HHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred HHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc--
Confidence 999997654 459999999999999999999999 8999999999999999999999999999986542211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---CCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---VKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
........||+.|||||++.+ .+|+.++|||||||++|||+||+.||.....
T Consensus 188 ------------------------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~- 242 (307)
T 3omv_A 188 ------------------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN- 242 (307)
T ss_dssp ------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-
T ss_pred ------------------------ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-
Confidence 112334568999999999853 4689999999999999999999999953321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
. ..+...+..... .|...... ......+.+++.+||+.||++||||+||++.|+.+..+
T Consensus 243 -~---~~~~~~~~~~~~-----~p~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 243 -R---DQIIFMVGRGYA-----SPDLSKLY--KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -H---HHHHHHHHTTCC-----CCCSTTSC--TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -H---HHHHHHHhcCCC-----CCCccccc--ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 1 112222222211 11111100 11234688999999999999999999999999988654
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.4e-53 Score=438.50 Aligned_cols=267 Identities=24% Similarity=0.251 Sum_probs=200.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC----ceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD----EKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|++ +|+.||||++...... ...++.|+..+.+++|||||+++|+|...+ ..|+|||||++|
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 5799999999999998 5899999999764322 223445667778899999999999998754 469999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS-----PKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
+|.++++.. .++|..+.+|+.|+|+||+|||+.. .++||||||||+|||+|+++++||+|||+|+...
T Consensus 87 sL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 87 SLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp BHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred cHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 999999753 4899999999999999999999821 1389999999999999999999999999998754
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC------CCCchhhhHHHHHHHHHHHhCC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV------KPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~~DVwS~Gvvl~elltG~ 633 (714)
.... ..........||+.|||||++.+. .++.++|||||||++|||+||+
T Consensus 160 ~~~~------------------------~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~ 215 (303)
T 3hmm_A 160 SATD------------------------TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp TTTT------------------------EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred CCCC------------------------ceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCC
Confidence 3211 011223345789999999999764 3678999999999999999998
Q ss_pred CccccCCCCcc---------hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 634 TAVVQVGSSEM---------DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 634 ~p~~~~~~~~~---------~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.||........ ...+.+...... +..+|.++......+....+.+++.+||+.||++||||+||++
T Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCCccccccccchhcccccchHHHHHHHHhc-----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 87732221111 011112111111 1223433333333456678899999999999999999999999
Q ss_pred HHhhhhccC
Q 005102 705 ALDRLIVSS 713 (714)
Q Consensus 705 ~L~~i~~~~ 713 (714)
.|+++....
T Consensus 291 ~L~~l~~~~ 299 (303)
T 3hmm_A 291 TLSQLSQQE 299 (303)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHc
Confidence 999987654
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.7e-52 Score=435.82 Aligned_cols=251 Identities=20% Similarity=0.230 Sum_probs=201.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||+||+|+++ +|+.||||+++.... +.+|+.+|++++|||||++++++.+.+..|+|||||++|+|.
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 138 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence 47999999999999986 489999999976432 247999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhccCCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~~~ 566 (714)
++++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++ ++||+|||+|+.+.......
T Consensus 139 ~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~- 208 (336)
T 4g3f_A 139 QLIKQM------GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK- 208 (336)
T ss_dssp HHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc-
Confidence 999765 469999999999999999999999 9999999999999999987 69999999998764321100
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.........||+.|||||++.+..|+.++|||||||++|||+||+.||....... +
T Consensus 209 ----------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~ 264 (336)
T 4g3f_A 209 ----------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--L 264 (336)
T ss_dssp ---------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--C
T ss_pred ----------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--H
Confidence 0112334578999999999999999999999999999999999999995433222 2
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
. ........+..+ +.+.. ...+.+++.+||+.||++|||++|+++.|.....
T Consensus 265 ~---~~i~~~~~~~~~-----~~~~~-----s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 265 C---LKIASEPPPIRE-----IPPSC-----APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp H---HHHHHSCCGGGG-----SCTTS-----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H---HHHHcCCCCchh-----cCccC-----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 2 122222221111 11111 2357899999999999999999999999887653
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-52 Score=440.00 Aligned_cols=243 Identities=21% Similarity=0.337 Sum_probs=201.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 46999999999999986 59999999997665555567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..|+.||+.||+|||+ ++||||||||+|||++.++++||+|||+|+.+...
T Consensus 160 ~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~------ 223 (346)
T 4fih_A 160 DIVTHT-------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 223 (346)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS------
T ss_pred HHHHcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCC------
Confidence 999643 48999999999999999999999 99999999999999999999999999999865321
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
........||+.|||||++.+..|+.++|||||||++|||++|+.||... .. .
T Consensus 224 ----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~---~ 276 (346)
T 4fih_A 224 ----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PP---L 276 (346)
T ss_dssp ----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CH---H
T ss_pred ----------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CH---H
Confidence 11234567899999999999999999999999999999999999999432 12 2
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+........ +.... ......++.+|+.+||+.||++|||++|+++
T Consensus 277 ~~~~~i~~~~~-------~~~~~---~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 277 KAMKMIRDNLP-------PRLKN---LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHHHSSC-------CCCSC---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcCCC-------CCCCc---cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22222222211 11110 1112236789999999999999999999875
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.5e-52 Score=438.00 Aligned_cols=244 Identities=22% Similarity=0.337 Sum_probs=195.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||+||+|++. +|+.||||++... .....+.|.+|+++|++++|||||++++++.+.+..|+|||||++|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~ 109 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGD 109 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 47999999999999975 5999999999764 33345689999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++....+ ..+++.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+.....
T Consensus 110 L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---- 178 (350)
T 4b9d_A 110 LFKRINAQKG----VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST---- 178 (350)
T ss_dssp HHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH----
T ss_pred HHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCC----
Confidence 9999975532 357899999999999999999999 99999999999999999999999999999865321
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|||||++.+..|+.++|||||||++|||+||+.||... .
T Consensus 179 ------------------------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~ 229 (350)
T 4b9d_A 179 ------------------------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-----S 229 (350)
T ss_dssp ------------------------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----S
T ss_pred ------------------------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----C
Confidence 01112345899999999999999999999999999999999999999432 2
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+.+........+ ..... ...++.+|+.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~i~~~~~~-------~~~~~-----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 230 MKNLVLKIISGSFP-------PVSLH-----YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHHTCCC-------CCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHcCCCC-------CCCcc-----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 23333333333221 11111 1235789999999999999999999975
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-52 Score=429.51 Aligned_cols=241 Identities=22% Similarity=0.330 Sum_probs=192.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEe----CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS----VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 481 (714)
+.||+|+||+||+|.+. ++..||||++... .....+.|.+|+++|++++|||||+++++|.+ .+..|+|||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 36999999999999986 4899999999754 33345679999999999999999999999875 34579999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeeCC-CCCeEEcccchhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK--YVHGDLKPSNILLGH-NMEPHVSDFGLARLA 558 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrDlkp~NILl~~-~~~~kl~DFGla~~~ 558 (714)
++|+|.+++... ..+++..+..|+.||+.||+|||+ ++ ||||||||+|||++. ++.+||+|||+|+..
T Consensus 112 ~gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 112 TSGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp CSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred CCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999765 468999999999999999999999 66 999999999999984 799999999999853
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .......||+.|||||++.+ +|+.++|||||||++|||+||+.||..
T Consensus 183 ~~------------------------------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 183 RA------------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CT------------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC------------------------------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 21 11223568999999999864 699999999999999999999999953
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... ....... +..... ....++ . ...++.+++.+||+.||++|||++|+++
T Consensus 232 ~~~----~~~~~~~-i~~~~~-~~~~~~----~-----~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 232 CQN----AAQIYRR-VTSGVK-PASFDK----V-----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CSS----HHHHHHH-HTTTCC-CGGGGG----C-----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCc----HHHHHHH-HHcCCC-CCCCCc----c-----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 221 1122222 222111 111111 1 1125789999999999999999999875
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.7e-52 Score=429.54 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=201.9
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||+||+|+++ +|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+.+..|+||||+++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g 116 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 358999999999999975 5899999999753 233457899999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 117 G~L~~~i~~~------~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 117 GELLKYIRKI------GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp EEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999765 469999999999999999999999 9999999999999999999999999999987642211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.....+..||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 188 --------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~---- 237 (311)
T 4aw0_A 188 --------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG---- 237 (311)
T ss_dssp --------------------------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred --------------------------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC----
Confidence 12234567999999999999999999999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
+..+.+.........+ +... ..++.+++.+||+.||++|||++|++
T Consensus 238 -~~~~~~~~i~~~~~~~--------p~~~-----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 238 -NEGLIFAKIIKLEYDF--------PEKF-----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -SHHHHHHHHHHTCCCC--------CTTC-----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -CHHHHHHHHHcCCCCC--------Cccc-----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 2223333333333221 1111 12578999999999999999999863
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-51 Score=416.74 Aligned_cols=239 Identities=21% Similarity=0.289 Sum_probs=186.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+..|+||||+ +|
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g 97 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence 47999999999999975 59999999997642 233567999999999999999999999999999999999999 68
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||+++++++||+|||+|+.....
T Consensus 98 ~L~~~l~~~------~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--- 165 (275)
T 3hyh_A 98 ELFDYIVQR------DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--- 165 (275)
T ss_dssp EHHHHHHHS------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCC---
Confidence 999999765 469999999999999999999999 99999999999999999999999999999865321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
....+..||+.|||||++.+..+ +.++||||+||++|||+||+.||...
T Consensus 166 --------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~---- 215 (275)
T 3hyh_A 166 --------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE---- 215 (275)
T ss_dssp -----------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred --------------------------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC----
Confidence 11224568999999999998876 58999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
......+........+. ... ..++.+++.+||+.||++|||++|+++
T Consensus 216 -~~~~~~~~i~~~~~~~p--------~~~-----s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 216 -SIPVLFKNISNGVYTLP--------KFL-----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -SHHHHHHHHHHTCCCCC--------TTS-----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CHHHHHHHHHcCCCCCC--------CCC-----CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 22233333333322211 111 125789999999999999999999976
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.4e-51 Score=439.22 Aligned_cols=243 Identities=21% Similarity=0.333 Sum_probs=201.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|+++ +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|||||||++|+|.
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 47999999999999986 59999999998765555677899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+...
T Consensus 237 ~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~------ 300 (423)
T 4fie_A 237 DIVTHT-------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 300 (423)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS------
T ss_pred HHHhcc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCC------
Confidence 999643 48999999999999999999999 99999999999999999999999999999865322
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||... .. .
T Consensus 301 ----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~---~ 353 (423)
T 4fie_A 301 ----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PP---L 353 (423)
T ss_dssp ----------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CH---H
T ss_pred ----------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CH---H
Confidence 11223456899999999999999999999999999999999999999432 12 2
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.+........ +.+.... .....+.+|+.+||+.||++|||++|+++
T Consensus 354 ~~~~~i~~~~~-------~~~~~~~---~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 354 KAMKMIRDNLP-------PRLKNLH---KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHHSCC-------CCCSCTT---SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcCCC-------CCCcccc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22222222211 1111110 11236789999999999999999999875
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.2e-51 Score=434.27 Aligned_cols=260 Identities=24% Similarity=0.324 Sum_probs=205.7
Q ss_pred cccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCC-CCccceEEEEEeC-CceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRH-SNIVTLRAYYWSV-DEKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~-~~~~lV~ 478 (714)
.+.||+|+||+||+|.+.. ++.||||++..... ...+.|.+|+++|++++| ||||+++|+|... +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 4589999999999998653 36899999987543 345679999999999965 8999999999764 5689999
Q ss_pred eccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeE
Q 005102 479 DYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 548 (714)
|||++|+|.++|+..... .....++|.+++.|+.|||+||+|||+ ++||||||||+|||+++++++|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceeeCCCCCEE
Confidence 999999999999754210 112458999999999999999999999 8999999999999999999999
Q ss_pred EcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHH
Q 005102 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 549 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~e 628 (714)
|+|||+|+.+..... ........||+.|||||++.+..|+.++|||||||++||
T Consensus 226 i~DFGlar~~~~~~~--------------------------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~E 279 (353)
T 4ase_A 226 ICDFGLARDIYKDPD--------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 279 (353)
T ss_dssp ECCCGGGSCTTTCTT--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ECcchhhhhcccCCC--------------------------ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHH
Confidence 999999986542211 112233457889999999999999999999999999999
Q ss_pred HHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 629 llt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
|+| |+.||....... .+...+..+.. +..+.. ...++.+++.+||+.||++||||+||++.|+
T Consensus 280 l~t~G~~Pf~~~~~~~-----~~~~~i~~g~~------~~~p~~-----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 280 IFSLGASPYPGVKIDE-----EFCRRLKEGTR------MRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp HTTTSCCSSTTCCCSH-----HHHHHHHHTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhCCCCCCCCCCHHH-----HHHHHHHcCCC------CCCCcc-----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 998 999995432221 12222223221 111111 1236889999999999999999999999999
Q ss_pred hhhcc
Q 005102 708 RLIVS 712 (714)
Q Consensus 708 ~i~~~ 712 (714)
+++.+
T Consensus 344 ~llq~ 348 (353)
T 4ase_A 344 NLLQA 348 (353)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.1e-51 Score=422.79 Aligned_cols=236 Identities=23% Similarity=0.255 Sum_probs=188.2
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||+||+|+.. +++.||||++++.. ......+.+|+++|++++|||||++++++.+.+..|+|||||+
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~ 109 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR 109 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCT
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCC
Confidence 47999999999999863 37899999997642 2223468899999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||+++++++||+|||+|+.....
T Consensus 110 gg~L~~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 179 (304)
T 3ubd_A 110 GGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH- 179 (304)
T ss_dssp TCEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCC-
Confidence 99999999765 458999999999999999999999 99999999999999999999999999999854321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
........||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 180 ---------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~--- 229 (304)
T 3ubd_A 180 ---------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK--- 229 (304)
T ss_dssp ----------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS---
T ss_pred ---------------------------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc---
Confidence 11233467899999999999999999999999999999999999999432
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
+..+.+.........+. ... ..++.+++.+||+.||++|||+
T Consensus 230 --~~~~~~~~i~~~~~~~p--------~~~-----s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 230 --DRKETMTMILKAKLGMP--------QFL-----SPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --SHHHHHHHHHHCCCCCC--------TTS-----CHHHHHHHHHHTCSSGGGSTTC
T ss_pred --CHHHHHHHHHcCCCCCC--------CcC-----CHHHHHHHHHHcccCHHHCCCC
Confidence 22233333333322211 111 2357899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5e-49 Score=408.00 Aligned_cols=255 Identities=23% Similarity=0.332 Sum_probs=185.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCC------------ce
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------------EK 474 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------------~~ 474 (714)
+.||+|+||+||+|+++ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+ ..
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l 90 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYL 90 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEE
Confidence 57999999999999975 589999999976543 34567999999999999999999999987654 36
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
|+|||||++|+|.+++...... ...++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 91 ~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 91 YIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp EEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccCcc
Confidence 8999999999999999865321 345677889999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
|+............. ............||+.|||||++.+..|+.++|||||||++|||++
T Consensus 165 a~~~~~~~~~~~~~~----------------~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~--- 225 (299)
T 4g31_A 165 VTAMDQDEEEQTVLT----------------PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--- 225 (299)
T ss_dssp C------------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---
T ss_pred ceecCCCcccccccc----------------ccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---
Confidence 997754321110000 0001122345679999999999999999999999999999999996
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
||.. ..+....+....... .. .........+.+++.+||+.||++|||+.|+++
T Consensus 226 Pf~~----~~~~~~~~~~~~~~~--~p----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 226 PFST----QMERVRTLTDVRNLK--FP----------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp CCSS----HHHHHHHHHHHHTTC--CC----------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC----ccHHHHHHHHHhcCC--CC----------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 7731 111112121111111 00 011223345678999999999999999999976
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-46 Score=405.45 Aligned_cols=258 Identities=21% Similarity=0.337 Sum_probs=194.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++... +..|+|||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE 139 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD 139 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence 47999999999999985 59999999997643 23346788999999999999999999998643 56899999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
||+ |+|.+++... ..+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+.
T Consensus 140 ~~~-g~L~~~i~~~------~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 140 LME-SDLHQIIHSS------QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp CCS-EEHHHHHTSS------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred CCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 995 7899999765 569999999999999999999999 999999999999999999999999999998653
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
..... .........||+.|||||++.+. .++.++||||+||++|||++|+.||..
T Consensus 210 ~~~~~------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 210 TSPAE------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp ------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cCccc------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 22100 01223456789999999998875 469999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCC-----------CCCCC--CCcH----HHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDP-----------YLAPD--ADKE----EEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~-----------~~~~~--~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
. +..+....+...... +....... .+... .... ....++.+|+.+||..||++|||++|
T Consensus 266 ~--~~~~~l~~I~~~~g~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e 341 (398)
T 4b99_A 266 K--NYVHQLQLIMMVLGT--PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA 341 (398)
T ss_dssp S--SHHHHHHHHHHHHCC--CCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred C--CHHHHHHHHHHhcCC--CChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHH
Confidence 2 222222222111111 00000000 00000 0000 01235789999999999999999999
Q ss_pred HHH
Q 005102 702 ISD 704 (714)
Q Consensus 702 vl~ 704 (714)
+++
T Consensus 342 ~L~ 344 (398)
T 4b99_A 342 ALR 344 (398)
T ss_dssp HTT
T ss_pred Hhc
Confidence 875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.7e-47 Score=403.30 Aligned_cols=218 Identities=19% Similarity=0.274 Sum_probs=165.5
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||+||+|+.+ +++.||||++..... ..++.+|+++|+++ +|||||++++++.+.++.|+||||+++
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 57999999999999864 468999999876543 35688999999998 699999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhccC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANIAG 562 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~ 562 (714)
|+|.+++. .+++.+++.|+.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+......
T Consensus 105 ~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 105 ESFLDILN---------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred ccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999983 48899999999999999999999 999999999999999876 799999999998654322
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.....................+.............||++|||||++.+. .++.++||||+||++|||+||+.||....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1100000000000000000000001112233456799999999999876 48999999999999999999999996543
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.1e-45 Score=411.38 Aligned_cols=242 Identities=21% Similarity=0.235 Sum_probs=192.8
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chh---HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQR---FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.++||+|+||+||+|+.+ +|+.||||++.+.. ... ......++.+++.++|||||+++++|.+.+..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 358999999999999986 49999999996531 111 22233456778888999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
|++|+|.++|... ..+++..++.|+.||+.||+|||+ ++||||||||+|||++.+|++||+|||+|+....
T Consensus 274 ~~GGdL~~~l~~~------~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 274 MNGGDLHYHLSQH------GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCSCBHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999765 459999999999999999999999 9999999999999999999999999999986532
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
. ...+..||+.|||||++.. ..|+.++||||+||++|||++|+.||...
T Consensus 345 ~------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 345 K------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp C------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred C------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1234579999999999964 57999999999999999999999999543
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHIS 703 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl 703 (714)
... +.....+........+ +... ..++.+|+.+||+.||++|++ ++||+
T Consensus 395 ~~~--~~~~i~~~i~~~~~~~--------p~~~-----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 395 KTK--DKHEIDRMTLTMAVEL--------PDSF-----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp GCC--CHHHHHHHHHHCCCCC--------CTTS-----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred ChH--HHHHHHHhhcCCCCCC--------CccC-----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 222 2223233333322211 1111 125789999999999999998 56664
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.8e-45 Score=413.65 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=201.6
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|+|||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 357999999999999986 5999999999877666667899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC--CCeEEcccchhhhhhccCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN--MEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~~~~~~ 564 (714)
.+++.... ..+++.++..|+.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 242 ~~~i~~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-- 311 (573)
T 3uto_A 242 FEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311 (573)
T ss_dssp HHHHTCTT-----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred HHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence 99997543 458999999999999999999999 999999999999999854 899999999998754211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||+.|||||++.+..|+.++||||+||++|||++|+.||... ..
T Consensus 312 ---------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--~~- 361 (573)
T 3uto_A 312 ---------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--ND- 361 (573)
T ss_dssp ---------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SH-
T ss_pred ---------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CH-
Confidence 112346899999999999999999999999999999999999999432 11
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.+.........+... .... ....+.+|+.+||+.||++|||++|+++
T Consensus 362 --~~~~~~i~~~~~~~~~~----~~~~-----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 362 --DETLRNVKSCDWNMDDS----AFSG-----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --HHHHHHHHTTCCCCCSG----GGTT-----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHHHHHhCCCCCCcc----cccC-----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22222222222211111 0011 1235789999999999999999999876
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2e-44 Score=380.30 Aligned_cols=272 Identities=32% Similarity=0.529 Sum_probs=223.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 124 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGG
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHH
Confidence 47999999999999998899999999987766667889999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++...... ...++|.++.+++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.......
T Consensus 125 ~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 194 (321)
T 2qkw_B 125 HLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ----- 194 (321)
T ss_dssp GSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-----
T ss_pred HHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccccccccccc-----
Confidence 99765321 1458999999999999999999999 8999999999999999999999999999875432110
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC-cchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS-EMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~-~~~l~ 647 (714)
........||+.|+|||++.+..++.++||||||+++|||+||+.||...... .....
T Consensus 195 ---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~ 253 (321)
T 2qkw_B 195 ---------------------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253 (321)
T ss_dssp ---------------------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred ---------------------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence 01112234688899999998889999999999999999999999999543332 23344
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
.|....... ..+.+.+++...... .......+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 254 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 254 EWAVESHNN-GQLEQIVDPNLADKI-RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHTHHHHTT-TCCCSSSSSSCTTCS-CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHhhhcccc-ccHHHhcChhhcccc-CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 554433322 234555565554333 3457778999999999999999999999999999987543
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.5e-44 Score=378.39 Aligned_cols=283 Identities=39% Similarity=0.620 Sum_probs=223.5
Q ss_pred cccCHHHHHHhc-----cccccccCceEEEEEEECCCcEEEEEEeCCCCch-hHHHHHHHHHHHhccCCCCccceEEEEE
Q 005102 396 VAFDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-RFKEFQTEVEAIGKIRHSNIVTLRAYYW 469 (714)
Q Consensus 396 ~~~~~~~l~~~~-----~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~ 469 (714)
..|++.++.... .+.||+|+||.||+|+..+|+.||||++...... ....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 456666666544 3579999999999999888999999999765322 2236899999999999999999999999
Q ss_pred eCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEE
Q 005102 470 SVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHV 549 (714)
Q Consensus 470 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 549 (714)
..+..++||||+++|+|.+++....... ..+++..+..|+.|++.||+|||+.+..+|+||||||+|||+++++.+||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQ--PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTC--CCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 9999999999999999999998764321 45999999999999999999999922229999999999999999999999
Q ss_pred cccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHH
Q 005102 550 SDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 550 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~el 629 (714)
+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||
T Consensus 176 ~Dfg~~~~~~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l 228 (326)
T 3uim_A 176 GDFGLAKLMDYKD---------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228 (326)
T ss_dssp CCCSSCEECCSSS---------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHH
T ss_pred ccCccccccCccc---------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHH
Confidence 9999998653221 1112234579999999999888899999999999999999
Q ss_pred HhCCCcccc---CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 630 ITGRTAVVQ---VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 630 ltG~~p~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
+||+.||.. ..........|+....... ......+....... .......+.+++.+||+.||++|||++||++.|
T Consensus 229 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp HHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC-CSTTSSCTTCTTSC-CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred HhCCCcccccccccccchhHHHHHHHHhhch-hhhhhcChhhcccc-CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 999999942 2223334455554333322 23444555444333 355778899999999999999999999999999
Q ss_pred hhh
Q 005102 707 DRL 709 (714)
Q Consensus 707 ~~i 709 (714)
++.
T Consensus 307 ~~~ 309 (326)
T 3uim_A 307 EGD 309 (326)
T ss_dssp HTS
T ss_pred cCc
Confidence 864
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=372.30 Aligned_cols=267 Identities=27% Similarity=0.410 Sum_probs=208.2
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|+||+||+|.+. +++.||+|++........+.|.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 358999999999999986 4899999999877767778899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++.++..|+.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..........
T Consensus 95 ~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 95 RGIIKSMD-----SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHCC-----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 99998643 458999999999999999999999 8999999999999999999999999999987643221100
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.. ...............||+.|+|||++.+..++.++||||||+++|||++|..|+..........
T Consensus 167 ~~--------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~ 232 (310)
T 3s95_A 167 GL--------------RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF 232 (310)
T ss_dssp ---------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS
T ss_pred cc--------------ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH
Confidence 00 0000001112235578999999999999999999999999999999999999985433322211
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
........... ..... ...+.+++.+||+.||++|||++++++.|+++..
T Consensus 233 ~~~~~~~~~~~----------~~~~~-----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 233 GLNVRGFLDRY----------CPPNC-----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp SBCHHHHHHHT----------CCTTC-----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhcccccc----------CCCCC-----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11111111111 11111 1247899999999999999999999999998864
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.2e-44 Score=375.70 Aligned_cols=260 Identities=23% Similarity=0.303 Sum_probs=202.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCc----eeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE----KLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~lV~e~~~~g 484 (714)
+.||+|+||+||+|++. ++.||||++..... ....+.+|+.++++++||||+++++++..... .++||||+++|
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g 107 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCC
Confidence 47999999999999986 79999999976433 23456779999999999999999999987543 69999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CceecCCCCCCeeeCCCCCeEEcccch
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK----------KYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~----------~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
+|.+++... .+++..+..|+.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 108 SLSDFLKAN-------VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp BHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 999999753 48999999999999999999999 7 999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-----CCCchhhhHHHHHHHHHH
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-----KPSQKWDIYSYGVILLEM 629 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DVwS~Gvvl~el 629 (714)
++....... ........||+.|+|||++.+. .++.++|||||||++|||
T Consensus 178 a~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el 231 (322)
T 3soc_A 178 ALKFEAGKS--------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231 (322)
T ss_dssp CEEECTTSC--------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccC--------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHH
Confidence 986543211 1112334679999999999863 456789999999999999
Q ss_pred HhCCCccccCCCCcch-----------hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 630 ITGRTAVVQVGSSEMD-----------LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 630 ltG~~p~~~~~~~~~~-----------l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
+||+.||......... ...+... ... ....+.............++.+++.+||+.||++|||
T Consensus 232 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 305 (322)
T 3soc_A 232 ASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEV-VVH-----KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305 (322)
T ss_dssp HTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHH-HTT-----SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCcchhccchhhhhccCCchhhhhhh-hhc-----ccCCCCccccccccchHHHHHHHHHHHccCChhhCcC
Confidence 9999999543322111 1111111 111 1112222222222345667999999999999999999
Q ss_pred HHHHHHHHhhhhcc
Q 005102 699 MRHISDALDRLIVS 712 (714)
Q Consensus 699 ~~evl~~L~~i~~~ 712 (714)
++||++.|+++.+.
T Consensus 306 ~~ell~~L~~l~~~ 319 (322)
T 3soc_A 306 AGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.7e-42 Score=363.01 Aligned_cols=280 Identities=33% Similarity=0.553 Sum_probs=222.7
Q ss_pred cccCHHHHHHhcc-----------ccccccCceEEEEEEECCCcEEEEEEeCCC----CchhHHHHHHHHHHHhccCCCC
Q 005102 396 VAFDLDELLKASA-----------FVLGKSGIGIVYKVVLEDGHTLAVRRLGEG----GSQRFKEFQTEVEAIGKIRHSN 460 (714)
Q Consensus 396 ~~~~~~~l~~~~~-----------~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~n 460 (714)
..|+++++.+++. +.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4567777777653 5799999999999997 5889999998753 2234567999999999999999
Q ss_pred ccceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCee
Q 005102 461 IVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNIL 540 (714)
Q Consensus 461 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NIL 540 (714)
|+++++++...+..++||||+++|+|.+++...... ..+++..+.+++.|++.||+|||+ .+|+||||||+||+
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil 165 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANIL 165 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGC---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEE
Confidence 999999999999999999999999999999754321 458999999999999999999999 89999999999999
Q ss_pred eCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhH
Q 005102 541 LGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIY 620 (714)
Q Consensus 541 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVw 620 (714)
+++++.+||+|||+++....... ........||+.|+|||.+.+ .++.++|||
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~--------------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~ 218 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQ--------------------------TVMTSRIVGTTAYMAPEALRG-EITPKSDIY 218 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSS--------------------------CEECSSCCSCGGGCCHHHHTT-EECTHHHHH
T ss_pred EcCCCcEEEeecccccccccccc--------------------------cccccccCCCcCcCChHHhcC-CCCccchhH
Confidence 99999999999999876432110 111223457899999998865 589999999
Q ss_pred HHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 621 SYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 621 S~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
|||+++|||++|+.||...... ..+..+..........+.+.+++.+.. ........+.+++.+||+.||++|||++
T Consensus 219 slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 219 SFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMND--ADSTSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp HHHHHHHHHHHCCCSBCTTBSS-SBTTHHHHHHHTTSCCHHHHSCSSCSC--CCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHHHHHHHCCCCcccCcch-HHHHHHHHHhhhhhhhhhhhccccccc--cchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 9999999999999999543322 223334443333444445555554432 2345667899999999999999999999
Q ss_pred HHHHHHhhhhcc
Q 005102 701 HISDALDRLIVS 712 (714)
Q Consensus 701 evl~~L~~i~~~ 712 (714)
++++.|+++..+
T Consensus 296 ~l~~~L~~l~~s 307 (307)
T 2nru_A 296 KVQQLLQEMTAS 307 (307)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHhcC
Confidence 999999998754
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9e-43 Score=365.31 Aligned_cols=254 Identities=29% Similarity=0.389 Sum_probs=197.4
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 35799999999999988 58899999997653 3344679999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK--YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|.+++...... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 121 L~~~l~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-- 192 (309)
T 3p86_A 121 LYRLLHKSGAR---EQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-- 192 (309)
T ss_dssp HHHHHHSTTHH---HHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC----------
T ss_pred HHHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc--
Confidence 99999865311 248999999999999999999999 78 999999999999999999999999999754321
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||+||+.||.... .
T Consensus 193 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~--~ 244 (309)
T 3p86_A 193 --------------------------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN--P 244 (309)
T ss_dssp -----------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC--H
T ss_pred --------------------------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--H
Confidence 111223457889999999999999999999999999999999999994321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
. +.......... ....... ...++.+++.+||+.||++|||++++++.|+++..+
T Consensus 245 ~---~~~~~~~~~~~------~~~~~~~-----~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 245 A---QVVAAVGFKCK------RLEIPRN-----LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp H---HHHHHHHHSCC------CCCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred H---HHHHHHHhcCC------CCCCCcc-----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1 11111111111 0111111 123588999999999999999999999999998754
No 26
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.7e-43 Score=368.53 Aligned_cols=240 Identities=22% Similarity=0.287 Sum_probs=197.9
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~ 100 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCc
Confidence 4799999999999998 46999999999764 33445678899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 101 L~~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 167 (328)
T 3fe3_A 101 VFDYLVAH------GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---- 167 (328)
T ss_dssp HHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS----
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC----
Confidence 99999765 458999999999999999999999 89999999999999999999999999999765321
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCC-chhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPS-QKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++ .++||||+||++|||++|+.||...
T Consensus 168 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~----- 217 (328)
T 3fe3_A 168 -------------------------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ----- 217 (328)
T ss_dssp -------------------------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-----
T ss_pred -------------------------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-----
Confidence 112334579999999999888765 8999999999999999999999432
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+................ .. ....+.+++.+||..||++|||++|+++
T Consensus 218 ~~~~~~~~i~~~~~~~p--------~~-----~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 218 NLKELRERVLRGKYRIP--------FY-----MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp SHHHHHHHHHHCCCCCC--------TT-----SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHhCCCCCC--------CC-----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22233333333222111 11 1225779999999999999999999875
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.7e-43 Score=368.64 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=203.5
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|.+. .+..||||++... .....+.|.+|++++++++||||+++++++...+..++||||+++
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN 134 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTT
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCC
Confidence 58999999999999985 3456999999875 334456799999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++.... ..+++.++..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 135 ~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 135 GSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp CBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 99999997653 458999999999999999999999 8999999999999999999999999999986543211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~ 642 (714)
. ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 207 ~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~- 260 (325)
T 3kul_A 207 A-------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN- 260 (325)
T ss_dssp C-------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-
T ss_pred c-------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-
Confidence 0 111223345778999999988899999999999999999999 9999943321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
. ........ ... ...... ....+.+++.+||+.||++|||++||++.|+++....
T Consensus 261 -~---~~~~~~~~-~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 261 -R---DVISSVEE-GYR------LPAPMG-----CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -H---HHHHHHHT-TCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -H---HHHHHHHc-CCC------CCCCCC-----cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 1 11221111 111 111111 2236889999999999999999999999999987653
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.7e-42 Score=372.52 Aligned_cols=258 Identities=25% Similarity=0.386 Sum_probs=204.8
Q ss_pred cccccccCceEEEEEEEC--------CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLE--------DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 477 (714)
.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++...+..|+|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 357999999999999863 356799999986533 3456799999999999 899999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 478 YDYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|||+++|+|.+++...... .....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEECCCCCE
Confidence 9999999999999764310 112358999999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|
T Consensus 243 kl~DFG~a~~~~~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ 296 (370)
T 2psq_A 243 KIADFGLARDINNIDY--------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 296 (370)
T ss_dssp EECCCSSCEETTCCCT--------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred EEccccCCcccCcccc--------------------------eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHH
Confidence 9999999986542211 01122334578899999999999999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||+| |+.||..... .++.. . +..... +..... ....+.+++.+||+.||++|||++|+++.|
T Consensus 297 ellt~g~~p~~~~~~--~~~~~---~-~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 297 EIFTLGGSPYPGIPV--EELFK---L-LKEGHR------MDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp HHHTTSCCSSTTCCG--GGHHH---H-HHTTCC------CCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHcCCCCCCCCCCH--HHHHH---H-HhcCCC------CCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 9999 9999954321 22221 1 111111 111111 223688999999999999999999999999
Q ss_pred hhhhc
Q 005102 707 DRLIV 711 (714)
Q Consensus 707 ~~i~~ 711 (714)
+++..
T Consensus 360 ~~il~ 364 (370)
T 2psq_A 360 DRILT 364 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.3e-42 Score=364.38 Aligned_cols=243 Identities=21% Similarity=0.324 Sum_probs=200.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 130 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence 47999999999999987 69999999998776666788999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 131 ~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 195 (321)
T 2c30_A 131 DIVSQV-------RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV----- 195 (321)
T ss_dssp HHHTTC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-----
T ss_pred HHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-----
Confidence 998643 48999999999999999999999 899999999999999999999999999987643211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||.... . .
T Consensus 196 -----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~--~---~ 247 (321)
T 2c30_A 196 -----------------------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS--P---V 247 (321)
T ss_dssp -----------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--H---H
T ss_pred -----------------------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--H---H
Confidence 11223457899999999999999999999999999999999999994321 1 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+........ +.... .......+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~-------~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 248 QAMKRLRDSPP-------PKLKN---SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHHHHSSC-------CCCTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCC-------CCcCc---cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22222222111 11111 0112235789999999999999999999986
No 30
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.4e-42 Score=354.71 Aligned_cols=251 Identities=22% Similarity=0.357 Sum_probs=205.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|.+.+++.||+|++...... .+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence 479999999999999988999999999875433 3679999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------ 160 (269)
T 4hcu_A 95 YLRTQR-----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ------ 160 (269)
T ss_dssp HHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH------
T ss_pred HHHhcC-----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccc------
Confidence 997654 458999999999999999999999 899999999999999999999999999998653210
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 161 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----~~ 214 (269)
T 4hcu_A 161 ---------------------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NS 214 (269)
T ss_dssp ---------------------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HH
T ss_pred ---------------------cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----HH
Confidence 112223345778999999998899999999999999999999 999994321 11
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+.......... +..... ....+.+++.+||+.||++|||++|+++.|+++..+
T Consensus 215 ~~~~~~~~~~~-------~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 215 EVVEDISTGFR-------LYKPRL-----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHHHTTCC-------CCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCcc-------CCCCCc-----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22222111111 111111 123588999999999999999999999999998764
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-42 Score=361.85 Aligned_cols=243 Identities=22% Similarity=0.358 Sum_probs=198.8
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence 4799999999999996 458999999997765556678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 170 (297)
T 3fxz_A 106 DVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----- 170 (297)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-----
T ss_pred HHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-----
Confidence 999753 48899999999999999999999 899999999999999999999999999987653211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .
T Consensus 171 -----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~ 222 (297)
T 3fxz_A 171 -----------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----L 222 (297)
T ss_dssp -----------------------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----H
T ss_pred -----------------------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----H
Confidence 112334579999999999999999999999999999999999999943211 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............ .... .......+.+++.+||+.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~--~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 223 RALYLIATNGTP--ELQN--------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHHHCSC--CCSC--------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHhCCCC--CCCC--------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111111222111 0000 1112235789999999999999999999975
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=369.66 Aligned_cols=242 Identities=19% Similarity=0.318 Sum_probs=191.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L 95 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCH
Confidence 57999999999999974 689999999876532 2235688999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||++.......
T Consensus 96 ~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---- 162 (347)
T 3zgw_A 96 FDYIISQ------DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK---- 162 (347)
T ss_dssp HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC----
Confidence 9999755 458999999999999999999999 899999999999999999999999999987543211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||... .
T Consensus 163 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~ 214 (347)
T 3zgw_A 163 -----------------------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----N 214 (347)
T ss_dssp --------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----S
T ss_pred -----------------------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----C
Confidence 111223457999999999988775 89999999999999999999999432 2
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
................ ... ...+.+++.+||+.||++|||++|+++
T Consensus 215 ~~~~~~~i~~~~~~~p--------~~~-----s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 215 VMALYKKIMRGKYDVP--------KWL-----SPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHHHHHHHTCCCCC--------TTC-----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHcCCCCCC--------CCC-----CHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 2233333333322111 111 125778999999999999999999985
No 33
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.8e-42 Score=361.55 Aligned_cols=257 Identities=24% Similarity=0.344 Sum_probs=198.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhc--cCCCCccceEEEEEeC----CceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGK--IRHSNIVTLRAYYWSV----DEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~~~~lV~e~~~ 482 (714)
+.||+|+||+||+|++ +++.||||++.... .+.+.+|.+++.. ++||||+++++++... ...++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 4799999999999998 68999999997542 3456667766665 7999999999997653 45789999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH--------EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
+|+|.++++. ..+++..+.+|+.|++.||+||| + ++|+||||||+|||++.++.+||+|||+
T Consensus 90 ~g~L~~~l~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 90 MGSLYDYLQL-------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp TCBHHHHHTT-------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred CCCHHHHHhh-------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 9999999953 35899999999999999999999 7 8999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC------CCCchhhhHHHHHHHHH
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV------KPSQKWDIYSYGVILLE 628 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~~DVwS~Gvvl~e 628 (714)
++....... ..........||+.|+|||++.+. .++.++|||||||++||
T Consensus 160 a~~~~~~~~------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~e 215 (301)
T 3q4u_A 160 AVMHSQSTN------------------------QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215 (301)
T ss_dssp CEEEETTTT------------------------EEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred eeecccccc------------------------cccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHH
Confidence 976542211 001122334689999999999876 45579999999999999
Q ss_pred HHhC----------CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 629 MITG----------RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 629 lltG----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
|+|| +.||................ ..... ..+..............+.+++.+||+.||++|||
T Consensus 216 l~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 289 (301)
T 3q4u_A 216 VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV-VCVDQ-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289 (301)
T ss_dssp HHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH-HTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred HHhhhcCccccccccccccccCCCCcchhhhhHH-HhccC-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC
Confidence 9999 88885543333332222221 11111 11222211122345678999999999999999999
Q ss_pred HHHHHHHHhhh
Q 005102 699 MRHISDALDRL 709 (714)
Q Consensus 699 ~~evl~~L~~i 709 (714)
++||++.|++|
T Consensus 290 ~~~i~~~L~~i 300 (301)
T 3q4u_A 290 ALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999986
No 34
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.1e-42 Score=374.33 Aligned_cols=255 Identities=26% Similarity=0.453 Sum_probs=194.0
Q ss_pred cccccccCceEEEEEEEC----CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|++. ++..||||+++... ....+.|.+|++++++++||||+++++++...+..++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 358999999999999875 47789999998653 3445679999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.++++... ..+++.++..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 130 ~~sL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 130 NGSLDSFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999998653 458999999999999999999999 899999999999999999999999999998764321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. ........++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 202 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~- 255 (373)
T 2qol_A 202 EA-------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS- 255 (373)
T ss_dssp -------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-
T ss_pred cc-------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 10 001112234677999999998999999999999999999998 999995332
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.. +..... ...... + ... .....+.+++.+||+.||++|||+++|++.|+++...
T Consensus 256 -~~---~~~~~i-~~~~~~-----~-~~~-----~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 256 -NQ---DVIKAV-DEGYRL-----P-PPM-----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -HH---HHHHHH-HTTEEC-----C-CCT-----TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -HH---HHHHHH-HcCCCC-----C-CCc-----cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 11 112111 111100 0 011 1223688999999999999999999999999998653
No 35
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-42 Score=361.78 Aligned_cols=260 Identities=24% Similarity=0.378 Sum_probs=201.6
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~ 481 (714)
+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 95 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECC
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeC
Confidence 4799999999999985 25889999999887766678899999999999999999999998653 5689999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 96 PYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp TTCBHHHHHHHCG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred CCCCHHHHHHhcc-----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 9999999997653 358999999999999999999999 89999999999999999999999999999865432
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
... ........++..|+|||.+.+..++.++||||||+++|||+||..|+.....
T Consensus 168 ~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~ 222 (295)
T 3ugc_A 168 KEF-------------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222 (295)
T ss_dssp ---------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH
T ss_pred cce-------------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH
Confidence 110 1112233457789999999989999999999999999999999998832110
Q ss_pred ----------CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 642 ----------SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 642 ----------~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
........+......... ..... ....++.+++.+||+.||++|||++|+++.|+++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 223 EFMRMIGNDKQGQMIVFHLIELLKNNGR------LPRPD-----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHHCTTCCTHHHHHHHHHHHHTTCC------CCCCT-----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhhcCccccchhHHHHHHHHhccCc------CCCCc-----CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 000011111111111111 01111 122368899999999999999999999999999876
Q ss_pred c
Q 005102 712 S 712 (714)
Q Consensus 712 ~ 712 (714)
.
T Consensus 292 ~ 292 (295)
T 3ugc_A 292 N 292 (295)
T ss_dssp C
T ss_pred h
Confidence 4
No 36
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.6e-42 Score=362.97 Aligned_cols=241 Identities=21% Similarity=0.269 Sum_probs=197.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.+ +|+.||||++++. .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg 90 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 47999999999999986 5899999999754 2234567889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 91 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--- 158 (337)
T 1o6l_A 91 ELFFHLSRE------RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--- 158 (337)
T ss_dssp BHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT---
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccC---
Confidence 999999754 458999999999999999999999 89999999999999999999999999998753211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---- 209 (337)
T 1o6l_A 159 -------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---- 209 (337)
T ss_dssp -------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----
T ss_pred -------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC----
Confidence 011223457899999999999999999999999999999999999995321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
.............. .+... ..++.+++.+||+.||++|| +++|+++
T Consensus 210 -~~~~~~~i~~~~~~--------~p~~~-----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 210 -HERLFELILMEEIR--------FPRTL-----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -HHHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -HHHHHHHHHcCCCC--------CCCCC-----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 12222222222211 11111 23578999999999999999 8888864
No 37
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.2e-42 Score=382.11 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=204.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+++|++++||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 357999999999999998899999999987543 4578999999999999999999999986 66789999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
++++.... ..+++..+.+++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 271 ~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----- 338 (454)
T 1qcf_A 271 DFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----- 338 (454)
T ss_dssp HHHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-----
T ss_pred HHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-----
Confidence 99975421 358899999999999999999999 899999999999999999999999999998653210
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
........+|..|+|||++.+..++.++|||||||++|||+| |+.||.... ..
T Consensus 339 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~-- 392 (454)
T 1qcf_A 339 ----------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NP-- 392 (454)
T ss_dssp ----------------------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HH--
T ss_pred ----------------------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HH--
Confidence 111122335678999999998899999999999999999999 999995322 11
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
+....... .... .... .....+.+++.+||+.||++|||+++|++.|+++..+.
T Consensus 393 -~~~~~i~~-~~~~------~~~~-----~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 393 -EVIRALER-GYRM------PRPE-----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -HHHHHHHH-TCCC------CCCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -HHHHHHHc-CCCC------CCCC-----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 22222211 1111 0111 12236889999999999999999999999999987653
No 38
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.7e-42 Score=356.20 Aligned_cols=255 Identities=23% Similarity=0.336 Sum_probs=200.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 96 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence 47999999999999975 5899999998553 2334567999999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 165 (294)
T 4eqm_A 97 TLSEYIESH------GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-- 165 (294)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc--
Confidence 999999755 458999999999999999999999 899999999999999999999999999998653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||.+.+..++.++||||||+++|||+||+.||.....
T Consensus 166 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--- 217 (294)
T 4eqm_A 166 -------------------------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--- 217 (294)
T ss_dssp ----------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH---
T ss_pred -------------------------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---
Confidence 1112234578999999999999999999999999999999999999943221
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHhhhhcc
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-TMRHISDALDRLIVS 712 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~~ 712 (714)
............+ .. ....... ....+.+++.+||+.||++|| +++++.+.|+++...
T Consensus 218 --~~~~~~~~~~~~~--~~-~~~~~~~-----~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 218 --VSIAIKHIQDSVP--NV-TTDVRKD-----IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp --HHHHHHHHSSCCC--CH-HHHSCTT-----SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred --HHHHHHHhhccCC--Cc-chhcccC-----CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 1111111211111 00 0001111 123688999999999999998 999999999987653
No 39
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.4e-42 Score=351.30 Aligned_cols=251 Identities=22% Similarity=0.372 Sum_probs=204.4
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|.++++..||||++...... .+++.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence 479999999999999998889999999875433 3679999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++.++..|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 93 ~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~------ 158 (268)
T 3sxs_A 93 YLRSHG-----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ------ 158 (268)
T ss_dssp HHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC------
T ss_pred HHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhh------
Confidence 997542 358999999999999999999999 899999999999999999999999999997653211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .
T Consensus 159 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~ 212 (268)
T 3sxs_A 159 ---------------------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-----S 212 (268)
T ss_dssp ---------------------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-----H
T ss_pred ---------------------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-----H
Confidence 112223345778999999988889999999999999999999 9999943221 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
........... ...+. . ....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 213 ~~~~~~~~~~~----~~~~~----~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 213 EVVLKVSQGHR----LYRPH----L----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHHHHHHTTCC----CCCCT----T----SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHHHHHcCCC----CCCCC----c----ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11111111111 01111 1 123588999999999999999999999999998764
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.6e-43 Score=375.66 Aligned_cols=254 Identities=21% Similarity=0.314 Sum_probs=202.8
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||.||+|.+. +++.||||+++.... ...+.|.+|+++|++++||||+++++++...+..++||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 357999999999999987 689999999986533 334568899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 199 L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~--- 267 (377)
T 3cbl_A 199 FLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV--- 267 (377)
T ss_dssp HHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE---
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc---
Confidence 999997542 358999999999999999999999 899999999999999999999999999997532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~ 644 (714)
.........++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .
T Consensus 268 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~ 322 (377)
T 3cbl_A 268 -----------------------YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--Q 322 (377)
T ss_dssp -----------------------EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--H
T ss_pred -----------------------eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--H
Confidence 0111111223567999999988889999999999999999999 9999953321 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.... .+...... ..... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 323 ~~~~----~~~~~~~~------~~~~~-----~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 323 QTRE----FVEKGGRL------PCPEL-----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHH----HHHTTCCC------CCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHH----HHHcCCCC------CCCCC-----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1111 11221110 01111 123688999999999999999999999999998753
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-41 Score=362.88 Aligned_cols=244 Identities=23% Similarity=0.266 Sum_probs=197.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch------hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ------RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|+.+ +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 97 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV 97 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcC
Confidence 57999999999999986 4899999999764321 3468999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC----CeEEcccchhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM----EPHVSDFGLARL 557 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~~ 557 (714)
++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++ .+||+|||+++.
T Consensus 98 ~gg~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 98 SGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp CSCBHHHHHTTC------SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999754 458999999999999999999999 8999999999999998877 799999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 169 ~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~ 219 (361)
T 2yab_A 169 IEDGV-----------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219 (361)
T ss_dssp CCTTC-----------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred cCCCC-----------------------------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 53211 1223457999999999999899999999999999999999999994
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. .. .+...........+.... .. .....+.+++.+||..||++|||++|+++
T Consensus 220 ~~--~~---~~~~~~i~~~~~~~~~~~----~~-----~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 220 GD--TK---QETLANITAVSYDFDEEF----FS-----QTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CS--SH---HHHHHHHHTTCCCCCHHH----HT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CC--CH---HHHHHHHHhcCCCCCchh----cc-----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 32 11 122222222211111000 00 11235789999999999999999999874
No 42
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.5e-41 Score=351.46 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=202.3
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||++.+.++..||||++...... .+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHH
Confidence 479999999999999998899999999875433 3679999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++.++..|+.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 109 ~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~------ 174 (283)
T 3gen_A 109 YLREMR-----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE------ 174 (283)
T ss_dssp HHHCGG-----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH------
T ss_pred HHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccc------
Confidence 997643 458999999999999999999999 899999999999999999999999999998653210
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .
T Consensus 175 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----~ 228 (283)
T 3gen_A 175 ---------------------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----S 228 (283)
T ss_dssp ---------------------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----H
T ss_pred ---------------------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----h
Confidence 111223345778999999998899999999999999999999 9999943221 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
........... ...... ....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 229 ~~~~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 229 ETAEHIAQGLR-------LYRPHL-----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHHTTCC-------CCCCTT-----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccC-------CCCCCc-----CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11111111111 111111 123688999999999999999999999999998753
No 43
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-41 Score=365.94 Aligned_cols=267 Identities=17% Similarity=0.218 Sum_probs=202.6
Q ss_pred ccccccCceEEEEEEECC------CcEEEEEEeCCCCchhH-----------HHHHHHHHHHhccCCCCccceEEEEEeC
Q 005102 409 FVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGSQRF-----------KEFQTEVEAIGKIRHSNIVTLRAYYWSV 471 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l~~~~~~~ 471 (714)
+.||+|+||.||+|.+.+ ++.||||++........ ..+..|+..+..++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 479999999999999865 47899999876542111 2244566778888999999999999865
Q ss_pred ----CceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC--CCC
Q 005102 472 ----DEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG--HNM 545 (714)
Q Consensus 472 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~ 545 (714)
...++||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||++ .++
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTT
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCC
Confidence 4479999999 999999997653 459999999999999999999999 8999999999999999 889
Q ss_pred CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 546 EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 546 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.+||+|||+++.+......... .........||+.|+|||++.+..++.++|||||||+
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~ 250 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAY---------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYC 250 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCS---------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred eEEEEECCcceecccCCccccc---------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHH
Confidence 9999999999876533211000 0111234458999999999999999999999999999
Q ss_pred HHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 626 LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 626 l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
+|||+||+.||...... ............. .+.++.++.+.... ...++.+++..||+.||++||++++|++.
T Consensus 251 l~el~~g~~Pf~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~RP~~~~l~~~ 323 (364)
T 3op5_A 251 MIQWLTGHLPWEDNLKD-PKYVRDSKIRYRE--NIASLMDKCFPAAN----APGEIAKYMETVKLLDYTEKPLYENLRDI 323 (364)
T ss_dssp HHHHHHSCCTTGGGTTC-HHHHHHHHHHHHH--CHHHHHHHHSCTTC----CCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHhCCCCccccccC-HHHHHHHHHHhhh--hHHHHHHHhccccc----CHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 99999999999643222 2222222222211 23333333322111 12368899999999999999999999999
Q ss_pred Hhhhhcc
Q 005102 706 LDRLIVS 712 (714)
Q Consensus 706 L~~i~~~ 712 (714)
|+++...
T Consensus 324 l~~~~~~ 330 (364)
T 3op5_A 324 LLQGLKA 330 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998754
No 44
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=365.36 Aligned_cols=245 Identities=20% Similarity=0.259 Sum_probs=195.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 47999999999999975 58999999998876666678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee--CCCCCeEEcccchhhhhhccCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL--GHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+ ++++.+||+|||+++......
T Consensus 175 ~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--- 243 (373)
T 2x4f_A 175 DRIIDES-----YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--- 243 (373)
T ss_dssp HHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---
Confidence 9886543 458999999999999999999999 899999999999999 677899999999998653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 244 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--~-- 293 (373)
T 2x4f_A 244 --------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--D-- 293 (373)
T ss_dssp --------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--H--
T ss_pred --------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--H--
Confidence 1123357899999999998899999999999999999999999994321 1
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.+............ ... . ....++.+++.+||+.||++|||++|+++
T Consensus 294 -~~~~~~i~~~~~~~~~---~~~-~-----~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 294 -AETLNNILACRWDLED---EEF-Q-----DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -HHHHHHHHHTCCCSCS---GGG-T-----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -HHHHHHHHhccCCCCh---hhh-c-----cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1222222222221110 000 0 11236889999999999999999999986
No 45
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=356.47 Aligned_cols=245 Identities=22% Similarity=0.284 Sum_probs=197.5
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 457999999999999986 489999999876422 1357899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC----CeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM----EPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 556 (714)
+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++ .+||+|||+++
T Consensus 96 ~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 96 VAGGELFDFLAEK------ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCSCBHHHHHTTS------SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred CCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999754 458999999999999999999999 8999999999999999887 79999999998
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 167 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 217 (326)
T 2y0a_A 167 KIDFGN-----------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217 (326)
T ss_dssp ECCTTS-----------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred ECCCCC-----------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence 653211 112345789999999999899999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... . .+.................+ .....+.+++.+||+.||++|||++|+++
T Consensus 218 ~~~~--~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 218 LGDT--K---QETLANVSAVNYEFEDEYFS---------NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCSS--H---HHHHHHHHHTCCCCCHHHHT---------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCC--H---HHHHHHHHhcCCCcCccccc---------cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 4321 1 11222222211111100000 11235789999999999999999999986
No 46
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.9e-41 Score=353.55 Aligned_cols=255 Identities=26% Similarity=0.414 Sum_probs=196.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|.+. ..+|+|+++.. .....+.|.+|++++++++||||+++++++. .+..++||||+++|+|
T Consensus 42 ~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L 118 (307)
T 3lb7_A 42 TRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSL 118 (307)
T ss_dssp EEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBH
T ss_pred eEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcH
Confidence 57999999999999875 36899988754 3334567999999999999999999999874 5668999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++.++..|+.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.......
T Consensus 119 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~--- 187 (307)
T 3lb7_A 119 YKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG--- 187 (307)
T ss_dssp HHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred HHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc---
Confidence 99997553 458999999999999999999999 8999999999999999999999999999975432110
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++. +..++.++|||||||++|||+||+.||......+
T Consensus 188 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~ 244 (307)
T 3lb7_A 188 -----------------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244 (307)
T ss_dssp -----------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred -----------------------cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH
Confidence 11122345789999999985 6678999999999999999999999995432211
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.+......... .+...... ......+.+++.+||+.||++|||+.|+++.|+.+..+
T Consensus 245 -----~~~~~~~~~~~-----~~~~~~~~--~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 245 -----QIIFMVGRGYA-----SPDLSKLY--KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -----HHHHHHHHTCC-----CCCSTTSC--SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -----HHHHHHhcCCC-----Ccchhhhh--cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 11111222111 11111000 01223688999999999999999999999999988654
No 47
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.6e-42 Score=366.72 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=202.6
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||+||+|++. +++.||||++... ......++.+|+.++++++||||+++++++...+..++||||+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 156 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 156 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeC
Confidence 47999999999999953 3678999999764 3344567899999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCC-CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcccchhhh
Q 005102 482 PNGSLATALHGKPGM-VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSDFGLARL 557 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~ 557 (714)
++|+|.+++...... .....+++.+++.|+.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++.
T Consensus 157 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 999999999754321 111358999999999999999999999 8999999999999999554 599999999987
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... ........||+.|+|||++.+..++.++|||||||++|||+| |+.||
T Consensus 234 ~~~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf 287 (367)
T 3l9p_A 234 IYRAGY--------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287 (367)
T ss_dssp HHHHSS--------------------------CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccccc--------------------------cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 643321 111122345788999999998899999999999999999998 99999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.... .. +.......... +..... ....+.+++.+||+.||++|||+++|++.|+.+..
T Consensus 288 ~~~~--~~---~~~~~i~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 288 PSKS--NQ---EVLEFVTSGGR-------MDPPKN-----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TTCC--HH---HHHHHHHTTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC--HH---HHHHHHHcCCC-------CCCCcc-----CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 4321 11 22222222111 001111 12358899999999999999999999999998764
No 48
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=358.01 Aligned_cols=244 Identities=18% Similarity=0.243 Sum_probs=197.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|... +++.||+|.+.... .....+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 47999999999999986 48899999987643 33467899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC--CCCeEEcccchhhhhhccCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH--NMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 90 ~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--- 158 (321)
T 1tki_A 90 ERINTSA-----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--- 158 (321)
T ss_dssp HHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---
Confidence 9997653 358999999999999999999999 89999999999999987 7899999999998653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 159 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~-- 208 (321)
T 1tki_A 159 --------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--N-- 208 (321)
T ss_dssp --------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--H--
T ss_pred --------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--H--
Confidence 0112346889999999998889999999999999999999999994321 1
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.+..............-+ ....++.+++.+||..||++|||++|+++
T Consensus 209 -~~~~~~i~~~~~~~~~~~~~---------~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 209 -QQIIENIMNAEYTFDEEAFK---------EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -HHHHHHHHHTCCCCCHHHHT---------TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -HHHHHHHHcCCCCCChhhhc---------cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22222222222211100000 11236789999999999999999999986
No 49
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-41 Score=352.52 Aligned_cols=266 Identities=21% Similarity=0.234 Sum_probs=206.7
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCC--ceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--EKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|++.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence 479999999999999865 8999999997643 234567889999999999999999999998765 679999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----CCCCCeEEcccchhhhhhc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~~~ 560 (714)
+|.+++...... ..+++.++..|+.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 95 ~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 95 SLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp BHHHHHHSGGGT---TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999865321 348999999999999999999999 899999999999999 8888899999999986532
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC--------CCCCCchhhhHHHHHHHHHHHhC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK--------VVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~~~DVwS~Gvvl~elltG 632 (714)
.. ......||+.|+|||++. +..++.++|||||||++|||+||
T Consensus 169 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 219 (319)
T 4euu_A 169 DE-----------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219 (319)
T ss_dssp TC-----------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHS
T ss_pred CC-----------------------------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhC
Confidence 11 112345789999999985 56789999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCC--cccc---------cCCCCCC-CCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKP--LADV---------LDPYLAP-DADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~---------~d~~~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
+.||....... ...+.+......... ...+ ..+.... ..........+.+++.+||+.||++|||++
T Consensus 220 ~~pf~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ 298 (319)
T 4euu_A 220 SLPFRPFEGPR-RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298 (319)
T ss_dssp SCSEECTTCGG-GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred CCCCCCCCccc-hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHH
Confidence 99996433322 223333333332211 0000 0001111 112345566788999999999999999999
Q ss_pred HHHHHHhhhh
Q 005102 701 HISDALDRLI 710 (714)
Q Consensus 701 evl~~L~~i~ 710 (714)
|+++...+..
T Consensus 299 ell~h~~d~~ 308 (319)
T 4euu_A 299 QFFAETSDIL 308 (319)
T ss_dssp HHHHHHHHHT
T ss_pred HhhhccHHHh
Confidence 9999887643
No 50
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=365.48 Aligned_cols=236 Identities=20% Similarity=0.259 Sum_probs=190.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||+||+|+.+ +|+.||||++++. .....+.+.+|.++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 108 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG 108 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999986 4899999999764 223346688999999988 699999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..++.|+.||+.||+|||+ ++|+||||||+|||++.++++||+|||+|+.....
T Consensus 109 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-- 177 (353)
T 3txo_A 109 GDLMFHIQKS------RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-- 177 (353)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccC--
Confidence 9999999765 458999999999999999999999 89999999999999999999999999999743211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 178 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~---- 227 (353)
T 3txo_A 178 --------------------------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE---- 227 (353)
T ss_dssp ----------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred --------------------------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC----
Confidence 11223456899999999998888999999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
+..+............. .. ....+.+++.+||+.||++||++
T Consensus 228 -~~~~~~~~i~~~~~~~p--------~~-----~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 228 -NEDDLFEAILNDEVVYP--------TW-----LHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -SHHHHHHHHHHCCCCCC--------TT-----SCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -CHHHHHHHHHcCCCCCC--------CC-----CCHHHHHHHHHHhhhCHHHccCC
Confidence 12222333333222111 11 11257899999999999999998
No 51
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.8e-41 Score=352.64 Aligned_cols=257 Identities=23% Similarity=0.316 Sum_probs=194.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||+||+|++.+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++ |+|
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l 105 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDL 105 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCH
Confidence 4799999999999999889999999997542 2234678999999999999999999999999999999999997 488
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---- 173 (311)
T 3niz_A 106 KKVLDENK-----TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---- 173 (311)
T ss_dssp HHHHHTCT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC----
T ss_pred HHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCc----
Confidence 88887653 458999999999999999999999 899999999999999999999999999998653211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +
T Consensus 174 ------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~ 227 (311)
T 3niz_A 174 ------------------------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD--D 227 (311)
T ss_dssp ------------------------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT--T
T ss_pred ------------------------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH--H
Confidence 11223456889999999876 56899999999999999999999999543322 2
Q ss_pred hHHHHHHHHhhcCC--cccc------cCCCCC--CCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKP--LADV------LDPYLA--PDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~--~~~~------~d~~~~--~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........+ .... .+.... ..... .....++.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 22222222111100 0000 000000 00000 011236789999999999999999999986
No 52
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.1e-42 Score=382.85 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=206.0
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|+||.||+|.++. +..||||+++.... ..++|.+|+++|++++||||++++++|...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 3579999999999999875 88999999986543 357899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++..... ..+++..++.|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 304 ~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 372 (495)
T 1opk_A 304 LDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT---- 372 (495)
T ss_dssp HHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC----
T ss_pred HHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCc----
Confidence 999976432 458999999999999999999999 899999999999999999999999999998653210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 645 (714)
........++..|+|||++.+..++.++|||||||++|||+| |+.||..... ..
T Consensus 373 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~ 427 (495)
T 1opk_A 373 -----------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQ 427 (495)
T ss_dssp -----------------------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GG
T ss_pred -----------------------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 111223345678999999988889999999999999999999 9999954322 22
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+.+. +..... ..... .....+.+++.+||+.||++|||+++|++.|+++...
T Consensus 428 ~~~~----~~~~~~------~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 428 VYEL----LEKDYR------MERPE-----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHH----HHTTCC------CCCCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHH----HHcCCC------CCCCC-----CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 2221 111111 11111 1223688999999999999999999999999998654
No 53
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.6e-41 Score=347.90 Aligned_cols=246 Identities=30% Similarity=0.487 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchh-------HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQR-------FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|+||.||+|++. +++.||||++....... .+.+.+|++++++++||||+++++++.+. .++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~lv~e~ 102 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEF 102 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--TEEEEEC
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--CeEEEEe
Confidence 47999999999999985 68999999987543221 16789999999999999999999998654 3799999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeeCCCCC-----eEEcccc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK--YVHGDLKPSNILLGHNME-----PHVSDFG 553 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~DFG 553 (714)
+++|+|.+.+.... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++. +||+|||
T Consensus 103 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 103 VPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp CTTCBHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred cCCCCHHHHHhccc-----CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 99999999887653 468999999999999999999999 78 999999999999988776 9999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc--CCCCCCchhhhHHHHHHHHHHHh
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL--KVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
+++.... ......||+.|+|||.+ ....++.++|||||||++|||++
T Consensus 175 ~~~~~~~-------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~ 223 (287)
T 4f0f_A 175 LSQQSVH-------------------------------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT 223 (287)
T ss_dssp TCBCCSS-------------------------------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-------------------------------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHc
Confidence 9874221 11234578899999998 34557899999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
|+.||.......... ......... .+..... ....+.+++.+||+.||++|||++|+++.|+++
T Consensus 224 g~~pf~~~~~~~~~~---~~~~~~~~~------~~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 224 GEGPFDEYSYGKIKF---INMIREEGL------RPTIPED-----CPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp SSCTTTTCCCCHHHH---HHHHHHSCC------CCCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCCCCccccccHHHH---HHHHhccCC------CCCCCcc-----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 999995443332211 211112111 1112111 123688999999999999999999999999875
No 54
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.8e-41 Score=360.78 Aligned_cols=245 Identities=22% Similarity=0.295 Sum_probs=197.1
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 457999999999999986 48999999997643 334567899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC---CCeEEcccchhhhhhcc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~ 561 (714)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++.....
T Consensus 114 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 114 ELFEDIVAR------EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp BHHHHHTTC------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 999998755 458999999999999999999999 899999999999999865 45999999999754321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 185 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~- 234 (362)
T 2bdw_A 185 -----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED- 234 (362)
T ss_dssp -----------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred -----------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-
Confidence 11123457899999999999899999999999999999999999994321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
................ .+ ........+.+++.+||+.||++|||+.|+++
T Consensus 235 ----~~~~~~~i~~~~~~~~---~~------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 235 ----QHRLYAQIKAGAYDYP---SP------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ----HHHHHHHHHHTCCCCC---TT------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----HHHHHHHHHhCCCCCC---cc------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1222222222221110 00 00112236789999999999999999999875
No 55
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-41 Score=354.35 Aligned_cols=238 Identities=21% Similarity=0.306 Sum_probs=196.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.+ +|+.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg 91 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG 91 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence 47999999999999986 58999999997542 233467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~---- 158 (318)
T 1fot_A 92 ELFSLLRKS------QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---- 158 (318)
T ss_dssp BHHHHHHHT------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS----
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCC----
Confidence 999999765 458999999999999999999999 8999999999999999999999999999975421
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---- 207 (318)
T 1fot_A 159 ---------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN---- 207 (318)
T ss_dssp ---------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----
T ss_pred ---------------------------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC----
Confidence 1123457899999999999999999999999999999999999995321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
.............. ..... ...+.+++.+||..||++|| +++|+++
T Consensus 208 -~~~~~~~i~~~~~~--------~p~~~-----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 208 -TMKTYEKILNAELR--------FPPFF-----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -HHHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -HHHHHHHHHhCCCC--------CCCCC-----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 12222333332211 11111 12578999999999999999 8888763
No 56
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.7e-41 Score=365.98 Aligned_cols=241 Identities=22% Similarity=0.330 Sum_probs=191.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
++||+|+||+||+|+.+. ++.||||++++.. ....+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~g 137 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 137 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCC
Confidence 589999999999999865 7899999997642 22234578999999887 899999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+|+.....
T Consensus 138 g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-- 206 (396)
T 4dc2_A 138 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-- 206 (396)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC--
Confidence 9999999764 458999999999999999999999 89999999999999999999999999999742211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 207 --------------------------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~ 260 (396)
T 4dc2_A 207 --------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260 (396)
T ss_dssp --------------------------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--
T ss_pred --------------------------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccc
Confidence 112334568999999999999999999999999999999999999995332211
Q ss_pred ---chhHHHH-HHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 ---MDLVNWM-QLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ---~~l~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
......+ +........ ++... ...+.+++.+||+.||++||++
T Consensus 261 ~~~~~~~~~~~~~i~~~~~~--------~p~~~-----s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 261 NPDQNTEDYLFQVILEKQIR--------IPRSL-----SVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCHHHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHTCSCTTTSTTC
T ss_pred ccchhhHHHHHHHHhccccC--------CCCcC-----CHHHHHHHHHHhcCCHhHcCCC
Confidence 1111222 222222211 11111 2257899999999999999996
No 57
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.5e-42 Score=361.10 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEECC-Cc----EEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-GH----TLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||+||+|++.. ++ .||+|.+... .....+.|.+|+.++++++||||++++++|... ..++||||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~ 99 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 99 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCT
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecC
Confidence 579999999999999753 44 4688888654 234457899999999999999999999999875 4789999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 100 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp TCBHHHHHHHST-----TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 999999997653 458999999999999999999999 899999999999999999999999999998765322
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. ........+|..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 172 ~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 225 (327)
T 3poz_A 172 K--------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225 (327)
T ss_dssp C---------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred c--------------------------cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH
Confidence 1 111223345778999999999999999999999999999999 9999953322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
..+... ....... .... .....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 226 --~~~~~~----~~~~~~~------~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 226 --SEISSI----LEKGERL------PQPP-----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --GGHHHH----HHTTCCC------CCCT-----TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --HHHHHH----HHcCCCC------CCCc-----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 222221 1111110 0111 122368899999999999999999999999998754
No 58
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-41 Score=359.31 Aligned_cols=246 Identities=24% Similarity=0.319 Sum_probs=195.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||+||+|++. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||+++|+|
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L 92 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcH
Confidence 47999999999999986 689999999865432 2335688999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++... ..+++.++..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 93 ~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--- 160 (323)
T 3tki_A 93 FDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR--- 160 (323)
T ss_dssp GGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE---
T ss_pred HHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCc---
Confidence 9999755 458999999999999999999999 8999999999999999999999999999986532210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||.........
T Consensus 161 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 217 (323)
T 3tki_A 161 -----------------------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217 (323)
T ss_dssp -----------------------ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH
T ss_pred -----------------------ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH
Confidence 112234567999999999987765 78999999999999999999999654333222
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+. ..... ..+ .......+.+++.+||+.||++|||++|+++
T Consensus 218 ~~~~~----~~~~~----~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 218 YSDWK----EKKTY----LNP-------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHH----TTCTT----STT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHh----ccccc----CCc-------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 22211 11110 000 0112235779999999999999999999875
No 59
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.6e-41 Score=374.57 Aligned_cols=247 Identities=25% Similarity=0.400 Sum_probs=200.7
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC-ceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-EKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~e~~~~gsL 486 (714)
.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+++|++++||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 357999999999999986 7899999998654 3468999999999999999999999987765 78999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 275 ~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 342 (450)
T 1k9a_A 275 VDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 342 (450)
T ss_dssp HHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----
Confidence 999976532 347899999999999999999999 89999999999999999999999999998743210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 645 (714)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +
T Consensus 343 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~ 394 (450)
T 1k9a_A 343 --------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--D 394 (450)
T ss_dssp ------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--T
T ss_pred --------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence 011234677999999999999999999999999999999 99999543322 2
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
... . +..+.. ...... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 395 ~~~---~-i~~~~~------~~~p~~-----~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 395 VVP---R-VEKGYK------MDAPDG-----CPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHH---H-HHTTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHH---H-HHcCCC------CCCCCc-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 222 1 111111 111111 223688999999999999999999999999998764
No 60
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-41 Score=358.60 Aligned_cols=258 Identities=23% Similarity=0.364 Sum_probs=204.0
Q ss_pred ccccccCceEEEEEEEC------CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 132 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM 132 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecC
Confidence 57999999999999985 348999999986533 33567999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCC------------------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC
Q 005102 482 PNGSLATALHGKPGMV------------------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~ 543 (714)
++|+|.+++....... ....+++.+++.|+.||+.||+|||+ ++|+||||||+||++++
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~ 209 (343)
T 1luf_A 133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGE 209 (343)
T ss_dssp TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECG
T ss_pred CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEECC
Confidence 9999999997642110 01468999999999999999999999 89999999999999999
Q ss_pred CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHH
Q 005102 544 NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYG 623 (714)
Q Consensus 544 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~G 623 (714)
++.+||+|||+++....... ........+|+.|+|||.+.+..++.++||||||
T Consensus 210 ~~~~kl~Dfg~~~~~~~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG 263 (343)
T 1luf_A 210 NMVVKIADFGLSRNIYSADY--------------------------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG 263 (343)
T ss_dssp GGCEEECCCSCHHHHTGGGC--------------------------BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CCeEEEeecCCCcccccCcc--------------------------ccccCCCcccceecChhhhccCCcCcccccHHHH
Confidence 99999999999987643211 1112233467889999999888999999999999
Q ss_pred HHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 624 VILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 624 vvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
+++|||+| |+.||.... ..+.......... +..... ....+.+++.+||+.||++|||++++
T Consensus 264 ~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~~ 326 (343)
T 1luf_A 264 VVLWEIFSYGLQPYYGMA-----HEEVIYYVRDGNI-------LACPEN-----CPLELYNLMRLCWSKLPADRPSFCSI 326 (343)
T ss_dssp HHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHhcCCCcCCCCC-----hHHHHHHHhCCCc-------CCCCCC-----CCHHHHHHHHHHcccCcccCCCHHHH
Confidence 99999999 999994321 1122222111111 011111 12368899999999999999999999
Q ss_pred HHHHhhhhcc
Q 005102 703 SDALDRLIVS 712 (714)
Q Consensus 703 l~~L~~i~~~ 712 (714)
++.|+++...
T Consensus 327 ~~~L~~~~~~ 336 (343)
T 1luf_A 327 HRILQRMCER 336 (343)
T ss_dssp HHHHHHTTC-
T ss_pred HHHHHHHHhh
Confidence 9999998754
No 61
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6e-41 Score=349.54 Aligned_cols=260 Identities=14% Similarity=0.153 Sum_probs=204.1
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|.. .+|+.||||++...... +.+.+|+++++++ +|+|++++++++......++||||+ +++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc--HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 4799999999999997 46899999998654322 4578899999999 7999999999999999999999999 9999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC-----eEEcccchhhhhhcc
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME-----PHVSDFGLARLANIA 561 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~~~~ 561 (714)
.+++.... ..+++..+.+|+.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 93 EDLLDLCG-----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred HHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99997653 358999999999999999999999 89999999999999987776 999999999876432
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
....... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 165 ~~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 223 (298)
T 1csn_A 165 VTKQHIP---------------------YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 223 (298)
T ss_dssp TTCCBCC---------------------CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred ccccccc---------------------ccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc
Confidence 2110000 1123345679999999999999999999999999999999999999954332
Q ss_pred CcchhHHHHHHHHhhc--CCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEK--KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
... ........... ....+. .+. ....+.+++.+||+.||++|||+++|++.|+++...
T Consensus 224 ~~~--~~~~~~~~~~~~~~~~~~~-~~~---------~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 224 ATN--KQKYERIGEKKQSTPLREL-CAG---------FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp CCH--HHHHHHHHHHHHHSCHHHH-TTT---------SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHhhccCccHHHH-Hhh---------CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 211 11111111111 111111 111 123688999999999999999999999999998754
No 62
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.8e-41 Score=357.58 Aligned_cols=260 Identities=13% Similarity=0.106 Sum_probs=204.4
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||+||+|+. .+|+.||||++...... +.+.+|+++++++ +||||+++++++...+..++||||+ +++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS--CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 4799999999999997 46899999998764332 4688999999999 9999999999999999999999999 9999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC-----eEEcccchhhhhhcc
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME-----PHVSDFGLARLANIA 561 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~~~~ 561 (714)
.+++.... ..+++..+..|+.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 92 EDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred HHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99997642 458999999999999999999999 89999999999999998887 999999999865432
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 164 ~~~~~~---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~ 222 (330)
T 2izr_A 164 ETKKHI---------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA 222 (330)
T ss_dssp TTCCBC---------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred CCCccc---------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc
Confidence 211000 01122345689999999999999999999999999999999999999954432
Q ss_pred CcchhHHHHHHHHhhcCCc-ccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPL-ADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.+..+.+.......... .+.... . .. ++.+++..||+.||.+||++++|.+.|+++...
T Consensus 223 --~~~~~~~~~i~~~~~~~~~~~~~~----~-----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 223 --DTLKERYQKIGDTKRATPIEVLCE----N-----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp --SSHHHHHHHHHHHHHHSCHHHHTT----T-----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHhhhccCCHHHHhc----c-----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 22222222222111100 010000 0 11 688999999999999999999999999987643
No 63
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=368.02 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=196.7
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 357999999999999875 589999999976532 33467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC---CCCCeEEcccchhhhhhcc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG---HNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~~~~ 561 (714)
+|.+.+... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ +++.+||+|||+++.....
T Consensus 96 ~L~~~i~~~------~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 96 ELFEDIVAR------EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp BHHHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 999998765 458999999999999999999999 8999999999999998 4678999999999754321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 167 ~----------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~-- 216 (444)
T 3soa_A 167 Q----------------------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE-- 216 (444)
T ss_dssp C----------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--
T ss_pred C----------------------------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--
Confidence 1 1122346899999999999989999999999999999999999999432
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ............... ..+... .....+.+++.+||+.||++|||++|+++
T Consensus 217 ~---~~~~~~~i~~~~~~~---~~~~~~------~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 217 D---QHRLYQQIKAGAYDF---PSPEWD------TVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp S---HHHHHHHHHHTCCCC---CTTTTT------TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c---HHHHHHHHHhCCCCC---Cccccc------cCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 122222222222111 111110 11236789999999999999999999976
No 64
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.7e-41 Score=344.49 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=205.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence 479999999999999988999999999876443 3679999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 93 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~------ 158 (267)
T 3t9t_A 93 YLRTQR-----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ------ 158 (267)
T ss_dssp HHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH------
T ss_pred HHhhCc-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccc------
Confidence 997653 358899999999999999999999 899999999999999999999999999998643210
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 159 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~ 212 (267)
T 3t9t_A 159 ---------------------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NS 212 (267)
T ss_dssp ---------------------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HH
T ss_pred ---------------------ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC-----HH
Confidence 111223345778999999988889999999999999999999 899984321 11
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+.......... +..... ....+.+++.+||+.||++|||++++++.|+++..+
T Consensus 213 ~~~~~i~~~~~-------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 213 EVVEDISTGFR-------LYKPRL-----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHHHTTCC-------CCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCc-------CCCCcc-----CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22222211111 111111 123678999999999999999999999999998764
No 65
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-41 Score=355.17 Aligned_cols=263 Identities=25% Similarity=0.281 Sum_probs=199.9
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc--CCCCccceEEEEEeC----CceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI--RHSNIVTLRAYYWSV----DEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~----~~~~lV~e~~ 481 (714)
.+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++..+ +||||+++++++... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 458999999999999986 8999999986532 24455666666555 899999999999887 6789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CceecCCCCCCeeeCCCCCeEEcccc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK--------KYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~--------~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
++|+|.++++.. .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||
T Consensus 118 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg 187 (337)
T 3mdy_A 118 ENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187 (337)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCCEEEEeCC
Confidence 999999999643 48999999999999999999998 6 99999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCch------hhhHHHHHHHH
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK------WDIYSYGVILL 627 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~------~DVwS~Gvvl~ 627 (714)
+++........ .........||+.|+|||++.+...+.+ +|||||||++|
T Consensus 188 ~a~~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 243 (337)
T 3mdy_A 188 LAVKFISDTNE------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243 (337)
T ss_dssp TCEECC---------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred Cceeecccccc------------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence 99765322110 0111234467999999999987766654 99999999999
Q ss_pred HHHhC----------CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 628 EMITG----------RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 628 elltG----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
||+|| +.||............. ....... ...+.............++.+++.+||+.||++||
T Consensus 244 el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 317 (337)
T 3mdy_A 244 EVARRCVSGGIVEEYQLPYHDLVPSDPSYEDM-REIVCIK-----KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL 317 (337)
T ss_dssp HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHH-HHHHTTS-----CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred HHHhccCcccccccccccHhhhcCCCCchhhh-HHHHhhh-----ccCccccccchhhHHHHHHHHHHHHhhhhChhhCC
Confidence 99999 66664332222222221 1111111 11222222222335677899999999999999999
Q ss_pred CHHHHHHHHhhhhccCC
Q 005102 698 TMRHISDALDRLIVSSD 714 (714)
Q Consensus 698 t~~evl~~L~~i~~~~~ 714 (714)
|++||++.|+++..+.+
T Consensus 318 s~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 318 TALRVKKTLAKMSESQD 334 (337)
T ss_dssp CHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHhhcc
Confidence 99999999999987653
No 66
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.7e-42 Score=365.53 Aligned_cols=260 Identities=24% Similarity=0.324 Sum_probs=202.9
Q ss_pred cccccccCceEEEEEEEC------CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCc-eeEEE
Q 005102 408 AFVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDE-KLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~-~~lV~ 478 (714)
.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++.++ +||||+++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 357999999999999842 368999999987533 3446799999999999 79999999999987654 89999
Q ss_pred eccCCCCHhhhhhCCCCCC------------------------------------------------------------C
Q 005102 479 DYIPNGSLATALHGKPGMV------------------------------------------------------------S 498 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~------------------------------------------------------------~ 498 (714)
||+++|+|.++++...... .
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999998653210 0
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCch
Q 005102 499 FTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQ 578 (714)
Q Consensus 499 ~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~ 578 (714)
...+++..+..|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~--------------- 248 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD--------------- 248 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT---------------
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc---------------
Confidence 1228999999999999999999999 8999999999999999999999999999986532211
Q ss_pred hhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhc
Q 005102 579 ERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEK 657 (714)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 657 (714)
........||+.|+|||++.+..++.++|||||||++|||+| |+.||......+ .+.......
T Consensus 249 -----------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~ 312 (359)
T 3vhe_A 249 -----------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEG 312 (359)
T ss_dssp -----------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-----HHHHHHHHT
T ss_pred -----------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-----HHHHHHHcC
Confidence 111223446788999999998999999999999999999999 999995432221 111222222
Q ss_pred CCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 658 KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 658 ~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.. ...... ...++.+++.+||+.||++|||++|+++.|+++..+
T Consensus 313 ~~------~~~~~~-----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 313 TR------MRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC------CCCCCC-----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 11 111111 123588999999999999999999999999998753
No 67
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.5e-42 Score=376.59 Aligned_cols=253 Identities=27% Similarity=0.429 Sum_probs=199.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+++|++++||||+++++++.. +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 357999999999999998888999999986543 34789999999999999999999999866 6789999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++....+ ..+++.++..|+.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 267 ~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 334 (452)
T 1fmk_A 267 DFLKGETG----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE----- 334 (452)
T ss_dssp HHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred HHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-----
Confidence 99964321 348999999999999999999999 899999999999999999999999999998654211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
........++..|+|||.+.+..++.++|||||||++|||+| |+.||.... .
T Consensus 335 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~--- 387 (452)
T 1fmk_A 335 ----------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--N--- 387 (452)
T ss_dssp ------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--H---
T ss_pred ----------------------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--H---
Confidence 011122335678999999998899999999999999999999 999994321 1
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
.+..... ..... ..... .....+.+++.+||+.||++|||++++++.|+++..+.
T Consensus 388 ~~~~~~i-~~~~~------~~~~~-----~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 388 REVLDQV-ERGYR------MPCPP-----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHH-HTTCC------CCCCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHH-HcCCC------CCCCC-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 1222221 11111 11111 12236889999999999999999999999999987654
No 68
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=362.87 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=204.7
Q ss_pred ccccccCceEEEEEEEC--------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEE
Q 005102 409 FVLGKSGIGIVYKVVLE--------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 478 (714)
+.||+|+||.||+|++. ++..||||++.... ....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~ 154 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 154 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEE
Confidence 57999999999999863 24679999998653 33456799999999999 8999999999999999999999
Q ss_pred eccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeE
Q 005102 479 DYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 548 (714)
||+++|+|.+++...... .....+++.++++|+.|++.||+|||+ .+|+||||||+|||+++++.+|
T Consensus 155 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 155 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp ECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEE
T ss_pred EecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEEcCCCcEE
Confidence 999999999999765311 011358999999999999999999999 8999999999999999999999
Q ss_pred EcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHH
Q 005102 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 549 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~e 628 (714)
|+|||+++....... ........+|+.|+|||++.+..++.++|||||||++||
T Consensus 232 L~DFG~a~~~~~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e 285 (382)
T 3tt0_A 232 IADFGLARDIHHIDY--------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 285 (382)
T ss_dssp ECSCSCCCCSSCCCT--------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred EcccCcccccccccc--------------------------cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHH
Confidence 999999986532211 011223345788999999999999999999999999999
Q ss_pred HHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 629 llt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
|+| |+.||.... ..+.......... +..... ...++.+++.+||+.||++|||++||++.|+
T Consensus 286 llt~g~~p~~~~~-----~~~~~~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 286 IFTLGGSPYPGVP-----VEELFKLLKEGHR-------MDKPSN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp HHTTSCCSSTTCC-----HHHHHHHHHTTCC-------CCCCSS-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhCCCCCCCCCC-----HHHHHHHHHcCCC-------CCCCcc-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 999 999994321 1222222211111 111111 1236889999999999999999999999999
Q ss_pred hhhcc
Q 005102 708 RLIVS 712 (714)
Q Consensus 708 ~i~~~ 712 (714)
++...
T Consensus 349 ~~~~~ 353 (382)
T 3tt0_A 349 RIVAL 353 (382)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98643
No 69
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=361.55 Aligned_cols=242 Identities=19% Similarity=0.282 Sum_probs=195.6
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|.... ++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||||+++|
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg 100 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG 100 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence 479999999999999865 8899999987532 233567889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 101 ~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--- 168 (384)
T 4fr4_A 101 DLRYHLQQN------VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--- 168 (384)
T ss_dssp EHHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT---
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC---
Confidence 999999865 458999999999999999999999 89999999999999999999999999999864321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---CCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---VKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 169 --------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~ 222 (384)
T 4fr4_A 169 --------------------------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS 222 (384)
T ss_dssp --------------------------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT
T ss_pred --------------------------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC
Confidence 12234568999999999964 4589999999999999999999999954322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-HHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-MRHIS 703 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl 703 (714)
. .....+......... ..... ...+.+++.+||+.||++||+ ++++.
T Consensus 223 ~--~~~~~~~~~~~~~~~--------~p~~~-----s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 223 T--SSKEIVHTFETTVVT--------YPSAW-----SQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp S--CHHHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred c--cHHHHHHHHhhcccC--------CCCcC-----CHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 2 222222222222111 11111 236889999999999999998 66654
No 70
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=352.03 Aligned_cols=249 Identities=26% Similarity=0.437 Sum_probs=195.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|++. ++.||||++... ...+.|.+|++++++++||||+++++++. +..++||||+++|+|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~ 88 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHH
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHH
Confidence 57999999999999985 789999999754 33478999999999999999999999876 45899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC-eEEcccchhhhhhccCCCCCc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME-PHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGla~~~~~~~~~~~~ 567 (714)
++...... ..+++..+++++.|+++||+|||+..+++|+||||||+||+++.++. +||+|||+++.....
T Consensus 89 ~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------ 159 (307)
T 2eva_A 89 VLHGAEPL---PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------ 159 (307)
T ss_dssp HHHCSSSE---ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHhccCCC---CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------
Confidence 99865321 34788999999999999999999965568999999999999998886 799999998754211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
.....||+.|+|||++.+..++.++||||||+++|||+||+.||........
T Consensus 160 -------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--- 211 (307)
T 2eva_A 160 -------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--- 211 (307)
T ss_dssp ------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---
T ss_pred -------------------------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---
Confidence 1123468899999999999999999999999999999999999954433221
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
........... +..... ....+.+++.+||+.||++|||++++++.|+.+..
T Consensus 212 ~~~~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 212 RIMWAVHNGTR-------PPLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp HHHHHHHTTCC-------CCCBTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred HHHHHHhcCCC-------CCcccc-----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11111111111 111111 12357899999999999999999999999998864
No 71
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5e-41 Score=357.21 Aligned_cols=242 Identities=22% Similarity=0.311 Sum_probs=192.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|+.+ +++.||||++.+.. ....+.+.+|+.++.++ +||||+++++++.+.+..|+||||+++
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g 94 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 94 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999986 48999999997642 23345688999999988 899999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 95 g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-- 163 (345)
T 3a8x_A 95 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-- 163 (345)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT--
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC--
Confidence 9999999754 458999999999999999999999 89999999999999999999999999999743211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...+...
T Consensus 164 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 217 (345)
T 3a8x_A 164 --------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217 (345)
T ss_dssp --------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--
T ss_pred --------------------------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccc
Confidence 111234568999999999999999999999999999999999999995432211
Q ss_pred c---hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 M---DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~---~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
. .....+........ ..++... ...+.+++.+||+.||++||++
T Consensus 218 ~~~~~~~~~~~~~i~~~~-------~~~p~~~-----s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 218 NPDQNTEDYLFQVILEKQ-------IRIPRSL-----SVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CHHHHHHHHHHCC-------CCCCTTS-----CHHHHHHHHHHTCSSTTTSTTC
T ss_pred ccccccHHHHHHHHHcCC-------CCCCCCC-----CHHHHHHHHHHhcCCHhHCCCC
Confidence 1 11112222221111 1111111 2357899999999999999996
No 72
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5e-41 Score=362.22 Aligned_cols=245 Identities=18% Similarity=0.263 Sum_probs=198.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~ 136 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF 136 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHH
Confidence 57999999999999986 58999999998766555678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC--CCCeEEcccchhhhhhccCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH--NMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 137 ~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--- 205 (387)
T 1kob_A 137 DRIAAED-----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--- 205 (387)
T ss_dssp HHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc---
Confidence 9997553 358999999999999999999999 89999999999999974 5789999999998653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||... ..
T Consensus 206 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~-- 255 (387)
T 1kob_A 206 --------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DD-- 255 (387)
T ss_dssp --------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SH--
T ss_pred --------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CH--
Confidence 011224689999999999999999999999999999999999999432 11
Q ss_pred hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.+.......... ++..... ...++.+++.+||+.||++|||++|+++
T Consensus 256 -~~~~~~i~~~~~~~----~~~~~~~-----~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 256 -LETLQNVKRCDWEF----DEDAFSS-----VSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp -HHHHHHHHHCCCCC----CSSTTTT-----SCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHhCCCCC----Ccccccc-----CCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 22222222222111 1111111 1236789999999999999999999976
No 73
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.2e-41 Score=344.16 Aligned_cols=246 Identities=21% Similarity=0.333 Sum_probs=198.4
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++. ++.||||++.... ....+.|.+|++++++++||||+++++++... +..++||||+++|
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTC
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCC
Confidence 47999999999999995 8899999998653 33456799999999999999999999999877 7789999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK--YVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|.+++..... ..+++..+..|+.|++.||+|||+ .+ |+||||||+||++++++.++|+|||++....
T Consensus 95 ~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--- 164 (271)
T 3kmu_A 95 SLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--- 164 (271)
T ss_dssp BHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS---
T ss_pred cHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec---
Confidence 99999987532 358999999999999999999999 77 9999999999999999999999998765321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCc---hhhhHHHHHHHHHHHhCCCccccC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQ---KWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.....||+.|+|||.+.+..++. ++||||||+++|||+||+.||...
T Consensus 165 ------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 165 ------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp ------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred ------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 11234588899999998765444 899999999999999999999533
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.. ............ .+...... ...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 215 ~~-----~~~~~~~~~~~~------~~~~~~~~-----~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 215 SN-----MEIGMKVALEGL------RPTIPPGI-----SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CH-----HHHHHHHHHSCC------CCCCCTTC-----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred Ch-----HHHHHHHHhcCC------CCCCCCCC-----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 21 111222222211 11121111 2358899999999999999999999999999865
No 74
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.4e-41 Score=361.01 Aligned_cols=240 Identities=21% Similarity=0.282 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|+++ +|+.||||++++.. ....+.+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 102 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence 57999999999999986 48999999997642 23346688899999987 899999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 103 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 171 (345)
T 1xjd_A 103 GDLMYHIQSC------HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-- 171 (345)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC--
Confidence 9999999754 458999999999999999999999 89999999999999999999999999998743211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||... ..
T Consensus 172 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~ 223 (345)
T 1xjd_A 172 --------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DE 223 (345)
T ss_dssp --------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SH
T ss_pred --------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CH
Confidence 01123456899999999999999999999999999999999999999432 11
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMR-HIS 703 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl 703 (714)
.+........... ..... ...+.+++.+||..||++||++. |++
T Consensus 224 ---~~~~~~i~~~~~~--------~p~~~-----s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 224 ---EELFHSIRMDNPF--------YPRWL-----EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---HHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---HHHHHHHHhCCCC--------CCccc-----CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 2222222222211 11111 23578999999999999999997 553
No 75
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.1e-41 Score=354.37 Aligned_cols=241 Identities=23% Similarity=0.292 Sum_probs=187.5
Q ss_pred ccccccCceEEEEEEE----CCCcEEEEEEeCCCC----chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVL----EDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|+||.||+|+. .+|+.||+|++.+.. ......+.+|++++++++||||+++++++...+..++||||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence 4799999999999997 468999999998642 22345688999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 103 LSGGELFMQLERE------GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp CTTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred CCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 9999999999754 458899999999999999999999 8999999999999999999999999999875322
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 174 ~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 174 D----------------------------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp ---------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred C----------------------------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 1 111223457899999999999899999999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
....+.........+ .... ...+.+++.+||+.||++|| +++|+++
T Consensus 226 -----~~~~~~~i~~~~~~~--------p~~~-----~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 226 -----RKKTIDKILKCKLNL--------PPYL-----TQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -----HHHHHHHHHHTCCCC--------CTTS-----CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -----HHHHHHHHHhCCCCC--------CCCC-----CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 122222333322111 1111 23578999999999999999 6667654
No 76
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.3e-41 Score=353.10 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=197.1
Q ss_pred ccccccCceEEEEEEECC-C-------cEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED-G-------HTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|+||.||+|+... + ..||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 93 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEF 93 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEEC
Confidence 479999999999998754 3 57999999877666678899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC--------eEEccc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME--------PHVSDF 552 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DF 552 (714)
+++|+|.+++.... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++.++. +||+||
T Consensus 94 ~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 94 VKFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp CTTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred CCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 99999999997653 348999999999999999999999 89999999999999998887 999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHh
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~ellt 631 (714)
|+++..... ....||+.|+|||.+.+ ..++.++||||||+++|||++
T Consensus 166 g~~~~~~~~--------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~ 213 (289)
T 4fvq_A 166 GISITVLPK--------------------------------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213 (289)
T ss_dssp CSCTTTSCH--------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHT
T ss_pred cccccccCc--------------------------------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHc
Confidence 998654211 01124677999999987 678999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
|..|+...... ..... ......... ... ...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 214 g~~~~~~~~~~----~~~~~-~~~~~~~~~--------~~~-----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 214 GGDKPLSALDS----QRKLQ-FYEDRHQLP--------APK-----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp TTCCTTTTSCH----HHHHH-HHHTTCCCC--------CCS-----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CCCCCccccch----HHHHH-HhhccCCCC--------CCC-----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 66555322111 11111 111111111 111 1147789999999999999999999999999987
Q ss_pred cC
Q 005102 712 SS 713 (714)
Q Consensus 712 ~~ 713 (714)
+.
T Consensus 276 p~ 277 (289)
T 4fvq_A 276 PD 277 (289)
T ss_dssp --
T ss_pred CC
Confidence 64
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.3e-41 Score=359.96 Aligned_cols=249 Identities=18% Similarity=0.262 Sum_probs=195.6
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC-----CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
.+.||+|+||.||+|..+ +|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 458999999999999975 5899999998642 1223578999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC---eEEcccchhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLARLA 558 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~ 558 (714)
++|+|.+.+...... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||+++..
T Consensus 109 ~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 109 DGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp SSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999998887543211 0348999999999999999999999 89999999999999986654 999999999765
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 184 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 184 GESG----------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CTTS----------------------------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cCCC----------------------------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 3211 112234579999999999999999999999999999999999999953
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .. ................. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~---~~---~~~~~i~~~~~~~~~~~----~~-----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 236 T---KE---RLFEGIIKGKYKMNPRQ----WS-----HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp S---HH---HHHHHHHHTCCCCCHHH----HT-----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c---HH---HHHHHHHcCCCCCCccc----cc-----cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2 11 12222222221110000 00 11236789999999999999999999975
No 78
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.3e-41 Score=347.31 Aligned_cols=257 Identities=23% Similarity=0.327 Sum_probs=193.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++ +|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence 47999999999999998899999999976432 2236788999999999999999999999999999999999975 99
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 154 (288)
T 1ob3_A 87 KKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---- 154 (288)
T ss_dssp HHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred HHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccc----
Confidence 99987653 458999999999999999999999 899999999999999999999999999998653211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......||+.|+|||++.+. .++.++|||||||++|||+||+.||.... ..+
T Consensus 155 ------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~ 208 (288)
T 1ob3_A 155 ------------------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EAD 208 (288)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHH
T ss_pred ------------------------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHH
Confidence 111223468899999999764 58999999999999999999999995332 111
Q ss_pred hHHHHHHHHhhcC--Cccc-----ccCCCCCCCC------CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK--PLAD-----VLDPYLAPDA------DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~--~~~~-----~~d~~~~~~~------~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ .... ..++...... ........+.+++.+||+.||++|||++|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 209 QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111111111100 0000 0111110000 00012236789999999999999999999875
No 79
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6e-41 Score=352.28 Aligned_cols=259 Identities=25% Similarity=0.362 Sum_probs=205.0
Q ss_pred cccccccCceEEEEEEE------CCCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVL------EDGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 107 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEee
Confidence 35799999999999986 235899999998653 34457799999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCC------------------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC
Q 005102 481 IPNGSLATALHGKPGMV------------------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~ 542 (714)
+++|+|.+++....... ....+++.++.+++.|++.||+|||+ ++|+||||||+||+++
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~NIli~ 184 (314)
T 2ivs_A 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVA 184 (314)
T ss_dssp CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEE
T ss_pred cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccchheEEEc
Confidence 99999999997643210 01348999999999999999999999 8999999999999999
Q ss_pred CCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHH
Q 005102 543 HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622 (714)
Q Consensus 543 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~ 622 (714)
+++.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||
T Consensus 185 ~~~~~kl~Dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 238 (314)
T 2ivs_A 185 EGRKMKISDFGLSRDVYEEDS--------------------------YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238 (314)
T ss_dssp TTTEEEECCCTTCEECTTTSC--------------------------EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred CCCCEEEcccccccccccccc--------------------------ceeccCCCCcccccChhhhcCCCcCchhhHHHH
Confidence 999999999999976532210 112223445788999999988889999999999
Q ss_pred HHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 623 GVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 623 Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
|+++|||+| |+.||..... ..+... ...... +..... ....+.+++.+||+.||++|||++|
T Consensus 239 G~il~el~t~g~~p~~~~~~--~~~~~~----~~~~~~------~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 239 GVLLWEIVTLGGNPYPGIPP--ERLFNL----LKTGHR------MERPDN-----CSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp HHHHHHHHTTSCCSSTTCCG--GGHHHH----HHTTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHhCCCCCCCCCCH--HHHHHH----hhcCCc------CCCCcc-----CCHHHHHHHHHHccCChhhCcCHHH
Confidence 999999999 9999953322 222221 111110 111111 1236889999999999999999999
Q ss_pred HHHHHhhhhcc
Q 005102 702 ISDALDRLIVS 712 (714)
Q Consensus 702 vl~~L~~i~~~ 712 (714)
+++.|+++...
T Consensus 302 l~~~l~~~~~~ 312 (314)
T 2ivs_A 302 ISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998653
No 80
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.8e-41 Score=349.42 Aligned_cols=258 Identities=19% Similarity=0.260 Sum_probs=194.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 86 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence 47999999999999986 48999999997543 33346788999999999999999999999999999999999975 6
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
+.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 154 (292)
T 3o0g_A 87 LKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---- 154 (292)
T ss_dssp HHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----
T ss_pred HHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----
Confidence 666665432 458999999999999999999999 89999999999999999999999999999765321
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||++.+.. ++.++|||||||++|||++|..||........
T Consensus 155 ------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~ 210 (292)
T 3o0g_A 155 ------------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210 (292)
T ss_dssp ------------------------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH
T ss_pred ------------------------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH
Confidence 11123345688999999998766 79999999999999999999999754332222
Q ss_pred hhHHHHHHHHhhcC-----CcccccCCC----CC---C-CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKK-----PLADVLDPY----LA---P-DADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~-----~~~~~~d~~----~~---~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.... ....... ......+.. .. . ..........+.+++.+||+.||++|||++|+++
T Consensus 211 ~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 211 QLKRIF-RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHH-HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHH-HHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 222111 1111100 000000000 00 0 0000112346789999999999999999999875
No 81
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-41 Score=357.28 Aligned_cols=259 Identities=23% Similarity=0.374 Sum_probs=191.2
Q ss_pred cccccccCceEEEEEEECCC----cEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCce------e
Q 005102 408 AFVLGKSGIGIVYKVVLEDG----HTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK------L 475 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~ 475 (714)
.+.||+|+||.||+|++... ..||||++... .....+.+.+|++++++++||||+++++++...+.. +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 35899999999999997643 27999999765 344567899999999999999999999999876655 9
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
+||||+++|+|.+++...........+++.++.+|+.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEEeecccc
Confidence 999999999999998643221111358999999999999999999999 89999999999999999999999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~ 634 (714)
+....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.
T Consensus 185 ~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~ 238 (323)
T 3qup_A 185 RKIYSGDY--------------------------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238 (323)
T ss_dssp ------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cccccccc--------------------------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCC
Confidence 86543211 011122335778999999998899999999999999999999 899
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
||..... .+.. ........ ...... ....+.+++.+||+.||++|||+.++++.|+++...
T Consensus 239 p~~~~~~--~~~~---~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 239 PYAGIEN--AEIY---NYLIGGNR-------LKQPPE-----CMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp TTTTCCG--GGHH---HHHHTTCC-------CCCCTT-----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CccccCh--HHHH---HHHhcCCC-------CCCCCc-----cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 9854322 2221 11111111 011111 223688999999999999999999999999998653
No 82
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5e-43 Score=366.07 Aligned_cols=261 Identities=25% Similarity=0.305 Sum_probs=185.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhc--cCCCCccceEEEEEeCC----ceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGK--IRHSNIVTLRAYYWSVD----EKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~e~~~ 482 (714)
+.||+|+||.||+|++. |+.||||++.... ...+.+|.+++.. ++||||+++++++...+ ..++||||++
T Consensus 9 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 47999999999999875 8999999987543 3567788888887 79999999999998876 6899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH--------EFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
+|+|.+++... .+++..+.+++.|++.||+||| + ++|+||||||+|||++.++.+||+|||+
T Consensus 85 ~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 85 HGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp TCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred CCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 99999999643 4788889999999999999999 7 8999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC------CCCchhhhHHHHHHHHH
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV------KPSQKWDIYSYGVILLE 628 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~~DVwS~Gvvl~e 628 (714)
++........ .........||+.|+|||++.+. .++.++|||||||++||
T Consensus 155 a~~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e 210 (303)
T 3gxj_A 155 AVRHDSATDT------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp -CCEETTTTE------------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-C
T ss_pred ceeccCCCcc------------------------cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHH
Confidence 9765422110 01112334679999999999776 34578999999999999
Q ss_pred HHhC----------CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC
Q 005102 629 MITG----------RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT 698 (714)
Q Consensus 629 lltG----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 698 (714)
|+|| +.||................... ....+..............+.+++.+||+.||++|||
T Consensus 211 l~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 284 (303)
T 3gxj_A 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284 (303)
T ss_dssp TGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTT------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred HHhcCCCccccceeeccccccCCCCccHHHHHHHHHH------hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCC
Confidence 9999 66664332222111111111111 1112222222222356678999999999999999999
Q ss_pred HHHHHHHHhhhhccC
Q 005102 699 MRHISDALDRLIVSS 713 (714)
Q Consensus 699 ~~evl~~L~~i~~~~ 713 (714)
++|+++.|+++....
T Consensus 285 ~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 285 ALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHHC-CCC-
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999987654
No 83
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.1e-41 Score=345.83 Aligned_cols=244 Identities=27% Similarity=0.434 Sum_probs=187.6
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCc----hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS----QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG 91 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTE
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCC
Confidence 57999999999999985 89999999876422 23467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---ceecCCCCCCeeeCC--------CCCeEEcccc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK---YVHGDLKPSNILLGH--------NMEPHVSDFG 553 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~---ivHrDlkp~NILl~~--------~~~~kl~DFG 553 (714)
+|.+++.. ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++. ++.+||+|||
T Consensus 92 ~L~~~~~~-------~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 92 PLNRVLSG-------KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EHHHHHTS-------SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred CHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 99999853 358999999999999999999999 67 999999999999986 6789999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCC
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
+++..... ......||+.|+|||.+.+..++.++||||||+++|||++|+
T Consensus 162 ~~~~~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 211 (271)
T 3dtc_A 162 LAREWHRT------------------------------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211 (271)
T ss_dssp C-------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred cccccccc------------------------------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99754321 111234688999999999889999999999999999999999
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhh
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRL 709 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i 709 (714)
.||..... . ........... ....... ....+.+++.+||+.||++|||++|+++.|++|
T Consensus 212 ~p~~~~~~--~---~~~~~~~~~~~------~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 212 VPFRGIDG--L---AVAYGVAMNKL------ALPIPST-----CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CTTTTSCH--H---HHHHHHHTSCC------CCCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCCCCH--H---HHHHhhhcCCC------CCCCCcc-----cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 99953221 1 11111111111 0111111 123688999999999999999999999999875
No 84
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.1e-41 Score=357.71 Aligned_cols=238 Identities=18% Similarity=0.217 Sum_probs=196.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +|+.||||++.+.. ....+.+.+|++++++++||||+++++++.+.+..|+||||+++|
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg 126 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCC
Confidence 47999999999999986 58999999987542 233567889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 127 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~---- 193 (350)
T 1rdq_E 127 EMFSHLRRI------GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---- 193 (350)
T ss_dssp BHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccC----
Confidence 999999754 358999999999999999999999 8999999999999999999999999999975421
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 194 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~----- 241 (350)
T 1rdq_E 194 ---------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD----- 241 (350)
T ss_dssp ---------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----
T ss_pred ---------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-----
Confidence 112335789999999999999999999999999999999999999532
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPT-----MRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~ 704 (714)
...+........... .+... ...+.+++.+||+.||++||+ ++|+++
T Consensus 242 ~~~~~~~~i~~~~~~--------~p~~~-----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 242 QPIQIYEKIVSGKVR--------FPSHF-----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp SHHHHHHHHHHCCCC--------CCTTC-----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHcCCCC--------CCCCC-----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 122223333222211 11111 235789999999999999998 777754
No 85
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.3e-41 Score=357.64 Aligned_cols=236 Identities=21% Similarity=0.274 Sum_probs=193.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||+||+|+.+. |+.||||++.+. .....+.+.+|..++..+ +||||+++++++.+.+..|+||||+++
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 105 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 105 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence 479999999999999875 789999999764 223346788999999998 799999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 106 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 174 (353)
T 2i0e_A 106 GDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-- 174 (353)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC--
Confidence 9999999754 458999999999999999999999 89999999999999999999999999999743211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 175 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~---- 224 (353)
T 2i0e_A 175 --------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE---- 224 (353)
T ss_dssp --------------------------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred --------------------------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC----
Confidence 11223456899999999999999999999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
+..+..+........+ +... ..++.+++.+||..||++||++
T Consensus 225 -~~~~~~~~i~~~~~~~--------p~~~-----s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 225 -DEDELFQSIMEHNVAY--------PKSM-----SKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -SHHHHHHHHHHCCCCC--------CTTS-----CHHHHHHHHHHTCSCTTSCTTC
T ss_pred -CHHHHHHHHHhCCCCC--------CCCC-----CHHHHHHHHHHhhcCHHHcCCC
Confidence 1222333333322211 1111 2357899999999999999964
No 86
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.1e-41 Score=346.10 Aligned_cols=251 Identities=19% Similarity=0.320 Sum_probs=191.4
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++ ..+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~ 98 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 98 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCT
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCC
Confidence 3579999999999999753 4579999987643 33456799999999999999999999998 4567899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 99 LGELRSFLQVRK-----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TEEHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 999999997553 358999999999999999999999 899999999999999999999999999998654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 171 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~ 223 (281)
T 1mp8_A 171 Y---------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223 (281)
T ss_dssp -----------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred c---------------------------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH
Confidence 0 01122335678999999988899999999999999999997 9999954322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.+.... ...... ...... ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 224 --~~~~~~---i~~~~~-------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 224 --NDVIGR---IENGER-------LPMPPN-----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp --GGHHHH---HHTTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHH---HHcCCC-------CCCCCC-----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 222221 111111 011111 12368899999999999999999999999999864
No 87
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-41 Score=356.01 Aligned_cols=237 Identities=21% Similarity=0.303 Sum_probs=192.5
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||||+ +|
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g 93 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG 93 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence 4799999999999997 468999999986531 122357899999999999999999999999999999999999 78
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 94 ~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--- 161 (336)
T 3h4j_B 94 ELFDYIVEK------KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--- 161 (336)
T ss_dssp EHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS---
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCC---
Confidence 999988755 458999999999999999999999 89999999999999999999999999999765321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.......||+.|+|||++.+..+ ++++|||||||++|||++|+.||.......
T Consensus 162 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~ 215 (336)
T 3h4j_B 162 --------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215 (336)
T ss_dssp --------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT
T ss_pred --------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH
Confidence 11223457899999999988776 789999999999999999999995432211
Q ss_pred chhHHHHHHHHhhcCCcccccCC--CCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDP--YLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ...+... ..+.. ....+.+++.+||+.||.+|||++|+++
T Consensus 216 ~---------------~~~i~~~~~~~p~~-----~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 216 L---------------FKKVNSCVYVMPDF-----LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp C---------------BCCCCSSCCCCCTT-----SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred H---------------HHHHHcCCCCCccc-----CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1 0011110 11111 1235789999999999999999999875
No 88
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.6e-41 Score=352.63 Aligned_cols=262 Identities=22% Similarity=0.315 Sum_probs=188.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++ |+|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L 89 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDL 89 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCH
Confidence 37999999999999975 58999999987543 2234678899999999999999999999999999999999997 699
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++...........+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---- 162 (317)
T 2pmi_A 90 KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV---- 162 (317)
T ss_dssp HHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC----
T ss_pred HHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc----
Confidence 9988643211112458999999999999999999999 899999999999999999999999999997653211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......||+.|+|||++.+. .++.++|||||||++|||+||+.||... ...+
T Consensus 163 ------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~ 216 (317)
T 2pmi_A 163 ------------------------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT--NDEE 216 (317)
T ss_dssp ------------------------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHH
T ss_pred ------------------------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--ChHH
Confidence 112234568899999999764 5899999999999999999999999532 2222
Q ss_pred hHHHHHHHHhhcC-Cc-cc-----ccCCCCCCC--CCcH---------HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKK-PL-AD-----VLDPYLAPD--ADKE---------EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~-~~-~~-----~~d~~~~~~--~~~~---------~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ .. .. ...+..... .... .....+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 217 QLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 2222221111100 00 00 000000000 0000 11236889999999999999999999875
No 89
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=359.57 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=182.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|++.. ++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 479999999999999874 7899999997643 2356889999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhhhccCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~~~~ 564 (714)
+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 137 ~~l~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--- 204 (349)
T 2w4o_A 137 DRIVEK------GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--- 204 (349)
T ss_dssp HHHTTC------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc---
Confidence 999765 458999999999999999999999 89999999999999975 889999999999865321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 205 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~- 257 (349)
T 2w4o_A 205 --------------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ- 257 (349)
T ss_dssp ----------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-
T ss_pred --------------------------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-
Confidence 01123457899999999999999999999999999999999999995432211
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............ ...+.. . .....+.+++.+||+.||++|||+.|+++
T Consensus 258 ---~~~~~i~~~~~~---~~~~~~-~-----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 258 ---FMFRRILNCEYY---FISPWW-D-----EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---HHHHHHHTTCCC---CCTTTT-T-----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---HHHHHHHhCCCc---cCCchh-h-----hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111222222111 111111 1 12236789999999999999999999876
No 90
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.4e-40 Score=352.26 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=194.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc-------------
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE------------- 473 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------------- 473 (714)
+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (332)
T 3qd2_B 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLK 91 (332)
T ss_dssp EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC----
T ss_pred eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhc
Confidence 57999999999999987 69999999997543 3345789999999999999999999999866432
Q ss_pred --------------------------------------------eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHH
Q 005102 474 --------------------------------------------KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVK 509 (714)
Q Consensus 474 --------------------------------------------~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 509 (714)
.++||||+++|+|.+++...... ...++..+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~ 168 (332)
T 3qd2_B 92 DESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---EDREHGVCLH 168 (332)
T ss_dssp ----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GGSCHHHHHH
T ss_pred cccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cchhhHHHHH
Confidence 78999999999999999876432 4567788999
Q ss_pred HHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhccccccee
Q 005102 510 IIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEV 589 (714)
Q Consensus 510 i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (714)
|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++............. ....
T Consensus 169 i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~----------------~~~~ 229 (332)
T 3qd2_B 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT----------------PMPA 229 (332)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC----------------------------
T ss_pred HHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc----------------cccc
Confidence 99999999999999 8999999999999999999999999999987653321100000 0000
Q ss_pred ecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCC
Q 005102 590 TTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLA 669 (714)
Q Consensus 590 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 669 (714)
........||+.|+|||++.+..++.++|||||||++|||++|..|+.. ............ ..
T Consensus 230 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~--~~-------- 292 (332)
T 3qd2_B 230 YATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLK--FP-------- 292 (332)
T ss_dssp --CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTC--CC--------
T ss_pred cccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccC--CC--------
Confidence 1223445689999999999999999999999999999999999877621 111111111110 00
Q ss_pred CCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 670 PDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 670 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.........+.+++.+||+.||++|||++|+++
T Consensus 293 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 293 --LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp --HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred --cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 011223346789999999999999999999986
No 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.2e-41 Score=356.11 Aligned_cols=246 Identities=23% Similarity=0.313 Sum_probs=178.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|.+. +++.||||++... ....+.+|+.++++++ ||||+++++++.+.+..++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 57999999999999986 5899999999653 3357789999999997 99999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~~~~~~ 563 (714)
.+++... ..+++.++..|+.|++.||+|||+ ++|+||||||+|||++.++ .+||+|||+++......
T Consensus 94 ~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 163 (325)
T 3kn6_A 94 FERIKKK------KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN- 163 (325)
T ss_dssp HHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-
Confidence 9999765 458999999999999999999999 8999999999999997665 89999999997543211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC-
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS- 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~- 642 (714)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 164 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 216 (325)
T 3kn6_A 164 ---------------------------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216 (325)
T ss_dssp -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC------
T ss_pred ---------------------------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc
Confidence 1122334688999999999999999999999999999999999999543221
Q ss_pred -cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 643 -EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 643 -~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
.....+.+.......... . .........++.+++.+||+.||++|||++|++
T Consensus 217 ~~~~~~~~~~~i~~~~~~~--------~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 217 TCTSAVEIMKKIKKGDFSF--------E-GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp -CCCHHHHHHHHTTTCCCC--------C-SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred ccccHHHHHHHHHcCCCCC--------C-cccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 111222222221111100 0 000011234688999999999999999999886
No 92
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-41 Score=359.95 Aligned_cols=256 Identities=25% Similarity=0.394 Sum_probs=192.5
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~~ 481 (714)
.+.||+|+||.||+|.+.+ +..||||.+... .....++|.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 3579999999999998642 246899998764 33456789999999999999999999999765 45789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.....
T Consensus 174 ~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 174 KHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp TTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999997653 358899999999999999999999 89999999999999999999999999999865322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~ 640 (714)
.... ........+|+.|+|||.+.+..++.++|||||||++|||+| |..||....
T Consensus 246 ~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~ 301 (373)
T 3c1x_A 246 EFDS------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301 (373)
T ss_dssp ------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred cccc------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC
Confidence 1000 111223345778999999999999999999999999999999 666774332
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.. +....+ ..... ...+ .. ....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 302 ~~--~~~~~~---~~~~~----~~~p---~~-----~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 302 TF--DITVYL---LQGRR----LLQP---EY-----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp SS--CHHHHH---HTTCC----CCCC---TT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH--HHHHHH---HcCCC----CCCC---CC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 22 222211 11111 0111 11 123688999999999999999999999999998754
No 93
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.6e-41 Score=351.16 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=200.5
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 480 (714)
+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++... +..++||||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 106 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEEC
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEe
Confidence 5799999999999984 35899999999854 333457899999999999999999999999876 668999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 107 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 107 LPSGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp CTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999996543 458999999999999999999999 8999999999999999999999999999986543
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
... .........||..|+|||.+.+..++.++||||||+++|||+||+.|+....
T Consensus 179 ~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 233 (302)
T 4e5w_A 179 DKE-------------------------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM 233 (302)
T ss_dssp TCC-------------------------EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred CCc-------------------------ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh
Confidence 211 0122334457888999999988889999999999999999999999873210
Q ss_pred ----------CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 641 ----------SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 641 ----------~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
.......... ........ ...... ....+.+++.+||+.||++|||++|+++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 234 ALFLKMIGPTHGQMTVTRLV-NTLKEGKR------LPCPPN-----CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHCSCCGGGHHHHHH-HHHHTTCC------CCCCTT-----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHhhccCCcccccCHHHHH-HHHhccCC------CCCCCC-----CCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0111111111 11111110 111111 2236889999999999999999999999999986
Q ss_pred c
Q 005102 711 V 711 (714)
Q Consensus 711 ~ 711 (714)
.
T Consensus 302 ~ 302 (302)
T 4e5w_A 302 K 302 (302)
T ss_dssp C
T ss_pred C
Confidence 3
No 94
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=346.68 Aligned_cols=242 Identities=21% Similarity=0.332 Sum_probs=187.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch--------------------------hHHHHHHHHHHHhccCCCCc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ--------------------------RFKEFQTEVEAIGKIRHSNI 461 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~H~ni 461 (714)
+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 47999999999999975 5889999998754211 13468899999999999999
Q ss_pred cceEEEEEe--CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCe
Q 005102 462 VTLRAYYWS--VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNI 539 (714)
Q Consensus 462 v~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NI 539 (714)
+++++++.. .+..++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNL 168 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGE
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHE
Confidence 999999986 5678999999999999886532 458999999999999999999999 8999999999999
Q ss_pred eeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC---CCch
Q 005102 540 LLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK---PSQK 616 (714)
Q Consensus 540 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~ 616 (714)
|++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.+
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 220 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSD----------------------------ALLSNTVGTPAFMAPESLSETRKIFSGKA 220 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSS----------------------------CEECCCCSCGGGCCGGGCCTTCCCEESHH
T ss_pred EECCCCCEEEecCCCcccccccc----------------------------ccccCCcCCccccChhhhccCCCCCCCch
Confidence 99999999999999997643211 0112345789999999997765 3789
Q ss_pred hhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCC
Q 005102 617 WDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKR 696 (714)
Q Consensus 617 ~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R 696 (714)
+|||||||++|||++|+.||... ....+........... +. ... ....+.+++.+||+.||++|
T Consensus 221 ~Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~-----~~-~~~-----~~~~l~~li~~~l~~dp~~R 284 (298)
T 2zv2_A 221 LDVWAMGVTLYCFVFGQCPFMDE-----RIMCLHSKIKSQALEF-----PD-QPD-----IAEDLKDLITRMLDKNPESR 284 (298)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC-----CS-SSC-----CCHHHHHHHHHHTCSCTTTS
T ss_pred hhhHhHHHHHHHHHHCCCCCCCc-----cHHHHHHHHhcccCCC-----CC-ccc-----cCHHHHHHHHHHhhcChhhC
Confidence 99999999999999999999432 1222222222211110 10 011 12358899999999999999
Q ss_pred CCHHHHHH
Q 005102 697 PTMRHISD 704 (714)
Q Consensus 697 Pt~~evl~ 704 (714)
||++|+++
T Consensus 285 ~s~~e~l~ 292 (298)
T 2zv2_A 285 IVVPEIKL 292 (298)
T ss_dssp CCHHHHTT
T ss_pred CCHHHHhc
Confidence 99999864
No 95
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.5e-41 Score=353.03 Aligned_cols=260 Identities=24% Similarity=0.335 Sum_probs=205.4
Q ss_pred cccccccCceEEEEEEE------CCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVL------EDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 35799999999999985 2468999999986543 3457799999999999 99999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCC------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 480 YIPNGSLATALHGKPGM------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|+++|+|.+++...... .....+++..+.+++.|++.||+|||+ .+|+||||||+||++++++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEcCCCCE
Confidence 99999999999765321 001258999999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........+|+.|+|||.+.+..++.++||||||+++|
T Consensus 185 kl~Dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 238 (313)
T 1t46_A 185 KICDFGLARDIKNDSN--------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238 (313)
T ss_dssp EECCCGGGSCTTSCTT--------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred EEcccccccccccccc--------------------------ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHH
Confidence 9999999986543211 01122234577899999998889999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||+| |+.||....... . +......... +..... ....+.+++.+||+.||++|||++|+++.|
T Consensus 239 ellt~g~~p~~~~~~~~-~----~~~~~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 239 ELFSLGSSPYPGMPVDS-K----FYKMIKEGFR------MLSPEH-----APAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp HHHTTTCCSSTTCCSSH-H----HHHHHHHTCC------CCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhCCCCCCCcccchh-H----HHHHhccCCC------CCCccc-----CCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 9999 999995432221 1 1111222111 111111 123688999999999999999999999999
Q ss_pred hhhhcc
Q 005102 707 DRLIVS 712 (714)
Q Consensus 707 ~~i~~~ 712 (714)
+++...
T Consensus 303 ~~~~~~ 308 (313)
T 1t46_A 303 EKQISE 308 (313)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998754
No 96
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.8e-41 Score=353.55 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=191.3
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCce----eEEEec
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK----LLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----~lV~e~ 480 (714)
+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+.. ++||||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~ 97 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence 4799999999999997 468999999997653 23346789999999999999999999998876544 999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~~g~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 98 VDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp CCEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred CCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 9999999999754 458999999999999999999999 8999999999999999999999999999986543
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.... ........||+.|+|||++.+..++.++||||||+++|||+||+.||....
T Consensus 169 ~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 169 SGNS-------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp --------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccc-------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2110 112223457899999999999999999999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH-HHHHHhhhh
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH-ISDALDRLI 710 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e-vl~~L~~i~ 710 (714)
....................+. ....+.+++.+||+.||++||++.+ +...|.++.
T Consensus 224 -----~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 224 -----PVSVAYQHVREDPIPPSARHEG---------LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp -----HHHHHHHHHHCCCCCHHHHSTT---------CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -----hHHHHHHHhcCCCCCcccccCC---------CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 1122222222221111111111 1235789999999999999996554 555665543
No 97
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-41 Score=359.78 Aligned_cols=260 Identities=24% Similarity=0.306 Sum_probs=201.4
Q ss_pred cccccccCceEEEEEEEC------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.||+|.+. ++..||||++.... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 458999999999999962 35689999997642 23346799999999999 89999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCCC-----------------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC
Q 005102 480 YIPNGSLATALHGKPGMV-----------------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG 542 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~-----------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~ 542 (714)
|+++|+|.+++....... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEEc
Confidence 999999999998654210 01247999999999999999999999 8999999999999999
Q ss_pred CCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHH
Q 005102 543 HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSY 622 (714)
Q Consensus 543 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~ 622 (714)
.++.+||+|||+++....... ........||+.|+|||.+.+..++.++|||||
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 260 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSN--------------------------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTT--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CCCcEEeCCCccCcccccCcc--------------------------ceeccCccCccCccCHHHhccCCCChhHhHHHH
Confidence 999999999999986543211 011122335778999999988899999999999
Q ss_pred HHHHHHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 623 GVILLEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 623 Gvvl~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
||++|||+| |+.||....... .. ......... +..... ....+.+++.+||+.||++|||++|
T Consensus 261 G~il~el~t~g~~p~~~~~~~~-~~----~~~~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ 324 (344)
T 1rjb_A 261 GILLWEIFSLGVNPYPGIPVDA-NF----YKLIQNGFK------MDQPFY-----ATEEIYIIMQSCWAFDSRKRPSFPN 324 (344)
T ss_dssp HHHHHHHTTTSCCSSTTCCCSH-HH----HHHHHTTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHcCCCCCcccCCcHH-HH----HHHHhcCCC------CCCCCC-----CCHHHHHHHHHHcCCCchhCcCHHH
Confidence 999999998 999995432221 11 112222111 111111 1236889999999999999999999
Q ss_pred HHHHHhhhhcc
Q 005102 702 ISDALDRLIVS 712 (714)
Q Consensus 702 vl~~L~~i~~~ 712 (714)
+++.|+.+...
T Consensus 325 l~~~l~~~~~~ 335 (344)
T 1rjb_A 325 LTSFLGCQLAD 335 (344)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHHH
Confidence 99999998754
No 98
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=380.79 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=198.8
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLE---DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.||+|+||.||+|.++ ++..||||+++... ....++|.+|+++|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999874 46789999998753 3456789999999999999999999999976 57899999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++.... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++........
T Consensus 422 L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~- 492 (613)
T 2ozo_A 422 LHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY- 492 (613)
T ss_dssp HHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred HHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce-
Confidence 999997653 458999999999999999999999 89999999999999999999999999999865322110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~ 644 (714)
........+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... .
T Consensus 493 ------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~ 546 (613)
T 2ozo_A 493 ------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--P 546 (613)
T ss_dssp ---------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--H
T ss_pred ------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--H
Confidence 011112234678999999998899999999999999999998 9999954322 2
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
++.. . +..+.. ...... ....+.++|.+||+.||++|||+++|++.|+.+..
T Consensus 547 ~~~~---~-i~~~~~------~~~p~~-----~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 547 EVMA---F-IEQGKR------MECPPE-----CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp HHHH---H-HHTTCC------CCCCTT-----CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHH---H-HHcCCC------CCCCCc-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 2222 1 112111 111111 22368899999999999999999999999998754
No 99
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.1e-41 Score=352.89 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=195.9
Q ss_pred ccccccCceEEEEEEECC-CcE----EEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHT----LAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|++.. ++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||++
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 97 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLP 97 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCT
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCC
Confidence 479999999999999753 443 8888876542 233356788999999999999999999985 567899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 98 LGSLLDHVRQHR-----GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp TCBSHHHHHSSG-----GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred CCCHHHHHHHcc-----ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 999999997653 458899999999999999999999 899999999999999999999999999998764321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. ........||..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 170 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 223 (325)
T 3kex_A 170 K--------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 223 (325)
T ss_dssp T--------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT
T ss_pred c--------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH
Confidence 1 111223456778999999998899999999999999999999 9999954322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
..+... ...... ...+.. ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 224 --~~~~~~----~~~~~~---~~~~~~--------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 224 --AEVPDL----LEKGER---LAQPQI--------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp --THHHHH----HHTTCB---CCCCTT--------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred --HHHHHH----HHcCCC---CCCCCc--------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 122211 111111 001111 11146789999999999999999999999998754
No 100
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-40 Score=345.63 Aligned_cols=254 Identities=24% Similarity=0.398 Sum_probs=190.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|++. ..||||+++... ....+.|.+|++++++++||||+++++++ ..+..++||||+++++|
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L 106 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcH
Confidence 47999999999999875 369999997653 33456799999999999999999999965 55678999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++.++.+|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 175 (289)
T 3og7_A 107 YHHLHASE-----TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG--- 175 (289)
T ss_dssp HHHHTTC--------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred HHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccc---
Confidence 99997553 458999999999999999999999 8999999999999999999999999999976532111
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||......+
T Consensus 176 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 232 (289)
T 3og7_A 176 -----------------------SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232 (289)
T ss_dssp -------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH
T ss_pred -----------------------cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH
Confidence 11122345788999999986 5678999999999999999999999995432211
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
. +......... ..... .... .....+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 233 -~----~~~~~~~~~~-~~~~~-~~~~-----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 233 -Q----IIEMVGRGSL-SPDLS-KVRS-----NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -H----HHHHHHHTSC-CCCTT-SSCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -H----HHHHhccccc-Ccchh-hccc-----cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1 1111222111 10000 0111 122468899999999999999999999999999864
No 101
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-40 Score=346.17 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=194.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV 119 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence 47999999999999986 588999999976422 23467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-- 188 (309)
T 2h34_A 120 DLAAMLRRQ------GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEK-- 188 (309)
T ss_dssp EHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccc--
Confidence 999999754 458999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 189 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---- 239 (309)
T 2h34_A 189 -------------------------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---- 239 (309)
T ss_dssp ---------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH----
T ss_pred -------------------------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch----
Confidence 011223357889999999999899999999999999999999999994321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHhhhhcc
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-TMRHISDALDRLIVS 712 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~~~ 712 (714)
. ..+...............+.. ...+.+++.+||+.||++|| |++++++.|+++...
T Consensus 240 -~-~~~~~~~~~~~~~~~~~~~~~---------~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 240 -L-SVMGAHINQAIPRPSTVRPGI---------PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp -H-HHHHHHHHSCCCCGGGTSTTC---------CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred -H-HHHHHHhccCCCCccccCCCC---------CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 1 122222222221111111111 12578999999999999999 999999999987654
No 102
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=353.09 Aligned_cols=254 Identities=29% Similarity=0.450 Sum_probs=197.3
Q ss_pred ccccccCceEEEEEEECC-----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.+.. +..||||++.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 129 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME 129 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence 579999999999998753 2469999998653 3344679999999999999999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 130 ~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 130 NGALDKFLREKD-----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp TEEHHHHHHHTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 999999997653 458999999999999999999999 899999999999999999999999999998654321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
.. ........+|..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 202 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 256 (333)
T 1mqb_A 202 EA-------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256 (333)
T ss_dssp ----------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred cc-------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH
Confidence 00 011122335778999999998899999999999999999999 9999943221
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.+.+.... ..... ..... ....+.+++.+||+.||++||+++++++.|+++...
T Consensus 257 -----~~~~~~~~-~~~~~------~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 257 -----HEVMKAIN-DGFRL------PTPMD-----CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp -----HHHHHHHH-TTCCC------CCCTT-----CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----HHHHHHHH-CCCcC------CCccc-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11222211 11110 01111 223688999999999999999999999999998654
No 103
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=344.55 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=203.0
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE---DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
..||+|+||.||+|.+. ++..||||++.... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 37999999999999864 57889999998753 34457799999999999999999999999 556789999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.......
T Consensus 95 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 165 (287)
T 1u59_A 95 PLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS- 165 (287)
T ss_dssp EHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC-
T ss_pred CHHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc-
Confidence 9999997543 458999999999999999999999 8999999999999999999999999999986542211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~ 643 (714)
.........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 166 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-- 219 (287)
T 1u59_A 166 ------------------------YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-- 219 (287)
T ss_dssp ------------------------EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--
T ss_pred ------------------------eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--
Confidence 0111223345788999999988889999999999999999999 9999954322
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.++ ......... +..... ....+.+++.+||+.||++|||++++++.|+++..+
T Consensus 220 ~~~---~~~i~~~~~-------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 220 PEV---MAFIEQGKR-------MECPPE-----CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp HHH---HHHHHTTCC-------CCCCTT-----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH---HHHHhcCCc-------CCCCCC-----cCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 112 211111111 111111 223688999999999999999999999999998654
No 104
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.3e-41 Score=358.68 Aligned_cols=243 Identities=23% Similarity=0.261 Sum_probs=187.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHH-HhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEA-IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||+||+|+.+. ++.||||++.+... .....+.+|..+ ++.++||||+++++++.+.+..|+||||+++
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 123 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 123 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCC
Confidence 479999999999999864 88999999976432 233456778777 5778999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 124 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-- 192 (373)
T 2r5t_A 124 GELFYHLQRE------RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-- 192 (373)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC--
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccC--
Confidence 9999999754 458899999999999999999999 89999999999999999999999999999853211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~---- 242 (373)
T 2r5t_A 193 --------------------------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR---- 242 (373)
T ss_dssp --------------------------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS----
T ss_pred --------------------------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC----
Confidence 11223446799999999999999999999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
+..+........... ..... ...+.+++.+||+.||++||++.+.++.+
T Consensus 243 -~~~~~~~~i~~~~~~--------~~~~~-----~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 243 -NTAEMYDNILNKPLQ--------LKPNI-----TNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp -BHHHHHHHHHHSCCC--------CCSSS-----CHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred -CHHHHHHHHHhcccC--------CCCCC-----CHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 122223333332211 11111 12578999999999999999986544433
No 105
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.5e-40 Score=356.15 Aligned_cols=245 Identities=20% Similarity=0.265 Sum_probs=189.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+++.. +++.||||++....... +.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC-HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc-HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 47999999999999986 58999999997654332 67889999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC--eEEcccchhhhhhccCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME--PHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~~~~~~~ 565 (714)
+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++. +||+|||+++.....
T Consensus 105 ~~l~~~------~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~---- 171 (361)
T 3uc3_A 105 ERICNA------GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---- 171 (361)
T ss_dssp HHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc----
Confidence 998754 458999999999999999999999 89999999999999987765 999999998743211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCch-hhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQK-WDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~-~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...... .
T Consensus 172 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~ 225 (361)
T 3uc3_A 172 -------------------------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-R 225 (361)
T ss_dssp ----------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-C
T ss_pred -------------------------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-H
Confidence 11223357899999999988887665 89999999999999999999543322 2
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.....++.......... .... ....+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~--------~~~~---~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 226 DYRKTIQRILSVKYSIP--------DDIR---ISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CHHHHHHHHHTTCCCCC--------TTSC---CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHhcCCCCCC--------CcCC---CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 23333333332221111 0000 1235789999999999999999999975
No 106
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8e-41 Score=345.23 Aligned_cols=251 Identities=24% Similarity=0.402 Sum_probs=201.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
+.||+|+||.||+|...++..||||++..... ..+.+.+|++++++++||||+++++++. .+..++||||+++++|.+
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 96 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHH
Confidence 47999999999999998888999999976543 3478999999999999999999999986 456899999999999999
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCcc
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQ 568 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 568 (714)
++..... ..+++..+.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 97 ~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------ 163 (279)
T 1qpc_A 97 FLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE------ 163 (279)
T ss_dssp HTTSHHH----HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC------
T ss_pred HHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc------
Confidence 9965421 258999999999999999999999 899999999999999999999999999998653211
Q ss_pred CCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchhH
Q 005102 569 SNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDLV 647 (714)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l~ 647 (714)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... . .
T Consensus 164 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~---~ 217 (279)
T 1qpc_A 164 ---------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--N---P 217 (279)
T ss_dssp ---------------------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--H---H
T ss_pred ---------------------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--H---H
Confidence 111223345778999999988889999999999999999999 899984321 1 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
+....... .. .+..... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 218 ~~~~~~~~-~~------~~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 218 EVIQNLER-GY------RMVRPDN-----CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHT-TC------CCCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-cc------CCCCccc-----ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 12222111 11 0111111 123688999999999999999999999999998754
No 107
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.6e-40 Score=350.80 Aligned_cols=258 Identities=24% Similarity=0.381 Sum_probs=203.2
Q ss_pred cccccccCceEEEEEEEC--------CCcEEEEEEeCCCC-chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLE--------DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 477 (714)
.+.||+|+||.||+|.+. ++..||||++.... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 357999999999999873 46789999998653 33456799999999999 899999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCe
Q 005102 478 YDYIPNGSLATALHGKPGM----------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEP 547 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 547 (714)
|||+++|+|.+++...... .....+++.++.+++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEEcCCCCE
Confidence 9999999999999865321 011348999999999999999999999 899999999999999999999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++....... ........+|+.|+|||++.+..++.++||||||+++|
T Consensus 197 kL~Dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 250 (334)
T 2pvf_A 197 KIADFGLARDINNIDY--------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 250 (334)
T ss_dssp EECCCTTCEECTTTSS--------------------------EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred EEcccccccccccccc--------------------------ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHH
Confidence 9999999976532110 11122334578899999998888999999999999999
Q ss_pred HHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 005102 628 EMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDAL 706 (714)
Q Consensus 628 ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 706 (714)
||+| |+.||.... ..+.......... +..... ....+.+++.+||+.||++|||++|+++.|
T Consensus 251 ellt~g~~p~~~~~-----~~~~~~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 251 EIFTLGGSPYPGIP-----VEELFKLLKEGHR-------MDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp HHHTTSCCSSTTCC-----HHHHHHHHHHTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhCCCCCcCcCC-----HHHHHHHHhcCCC-------CCCCcc-----CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 9999 999994321 1222222212111 111111 123688999999999999999999999999
Q ss_pred hhhhc
Q 005102 707 DRLIV 711 (714)
Q Consensus 707 ~~i~~ 711 (714)
+++..
T Consensus 314 ~~l~~ 318 (334)
T 2pvf_A 314 DRILT 318 (334)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99864
No 108
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.8e-40 Score=353.20 Aligned_cols=262 Identities=24% Similarity=0.299 Sum_probs=204.9
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhc--cCCCCccceEEEEEeCC----ceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGK--IRHSNIVTLRAYYWSVD----EKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~e~~ 481 (714)
.+.||+|+||.||+|++ +|+.||||++... ....+.+|++++.. ++||||+++++++...+ ..++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 45899999999999998 4899999999653 23567889888887 78999999999998776 789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH--------EFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
++|+|.+++... .+++.++.+++.|++.||+||| + .+|+||||||+|||++.++.+||+|||
T Consensus 123 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 123 EHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEECC
Confidence 999999999643 4899999999999999999999 7 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC------CCchhhhHHHHHHHH
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK------PSQKWDIYSYGVILL 627 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~~~DVwS~Gvvl~ 627 (714)
+++....... ..........||+.|+|||.+.+.. ++.++|||||||++|
T Consensus 193 ~~~~~~~~~~------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 248 (342)
T 1b6c_B 193 LAVRHDSATD------------------------TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248 (342)
T ss_dssp TCEEEETTTT------------------------EEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred Cceecccccc------------------------ccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHH
Confidence 9976542210 0011233456799999999997652 347899999999999
Q ss_pred HHHhC----------CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 628 EMITG----------RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 628 elltG----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
||+|| +.||............+....... ...+.........+....+.+++.+||+.||++||
T Consensus 249 el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 322 (342)
T 1b6c_B 249 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 322 (342)
T ss_dssp HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred HHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHH------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCC
Confidence 99999 778854433333333333222111 11222222222235667899999999999999999
Q ss_pred CHHHHHHHHhhhhccC
Q 005102 698 TMRHISDALDRLIVSS 713 (714)
Q Consensus 698 t~~evl~~L~~i~~~~ 713 (714)
|++||++.|+++....
T Consensus 323 s~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 323 TALRIKKTLSQLSQQE 338 (342)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999987653
No 109
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=361.70 Aligned_cols=267 Identities=21% Similarity=0.225 Sum_probs=207.0
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCC--ceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--EKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++.. |+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g 94 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence 479999999999999865 8999999997643 233567889999999999999999999998765 679999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----CCCCCeEEcccchhhhhhc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL----GHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~~~ 560 (714)
+|.+++...... ..+++..++.|+.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 95 ~L~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 95 SLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp EHHHHTTSGGGT---TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred CHHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999765321 338999999999999999999999 899999999999999 7888899999999986532
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--------CCCCchhhhHHHHHHHHHHHhC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--------VKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~~DVwS~Gvvl~elltG 632 (714)
. .......||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 169 ~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg 219 (396)
T 4eut_A 169 D-----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219 (396)
T ss_dssp G-----------------------------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred C-----------------------------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHC
Confidence 1 11223457899999999864 4578899999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCC-c-ccc---------cCCCCCC-CCCcHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKP-L-ADV---------LDPYLAP-DADKEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~---------~d~~~~~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
+.||........ ..+.+......... . ... ....... ..-.......+.+++.+||+.||++|||++
T Consensus 220 ~~Pf~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~ 298 (396)
T 4eut_A 220 SLPFRPFEGPRR-NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298 (396)
T ss_dssp SCSEECTTCTTT-CHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred CCCCCCCCcccc-hHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHH
Confidence 999964333222 22333333332211 0 000 0001111 111245666788999999999999999999
Q ss_pred HHHHHHhhhhc
Q 005102 701 HISDALDRLIV 711 (714)
Q Consensus 701 evl~~L~~i~~ 711 (714)
|+++.+++++.
T Consensus 299 e~l~~l~~il~ 309 (396)
T 4eut_A 299 QFFAETSDILH 309 (396)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998864
No 110
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-40 Score=366.96 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=196.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 101 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG 101 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 47999999999999986 69999999997532 223467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 102 ~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 102 ELFDYICKN------GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp EHHHHTTSS------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 999999754 458999999999999999999999 899999999999999999999999999997643210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 171 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--- 220 (476)
T 2y94_A 171 ---------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--- 220 (476)
T ss_dssp ---------------------------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred ---------------------------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC---
Confidence 1123457899999999988765 789999999999999999999995322
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.............. .... ....+.+++.+||+.||++|||++|+++
T Consensus 221 --~~~~~~~i~~~~~~--------~p~~-----~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 221 --VPTLFKKICDGIFY--------TPQY-----LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --SHHHHHHHHTTCCC--------CCTT-----CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHHhcCCcC--------CCcc-----CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 12222222222111 0111 1125789999999999999999999986
No 111
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3e-41 Score=380.10 Aligned_cols=253 Identities=27% Similarity=0.436 Sum_probs=203.7
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.+.||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|++++||||+++++++.. +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 357999999999999998888999999987543 34789999999999999999999999866 6789999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++....+ ..+++.+++.|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 350 ~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----- 417 (535)
T 2h8h_A 350 DFLKGETG----KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE----- 417 (535)
T ss_dssp HHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-----
T ss_pred HHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-----
Confidence 99964321 348999999999999999999999 899999999999999999999999999998653210
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
........++..|+|||++.+..++.++|||||||++|||+| |+.||.... .
T Consensus 418 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--~--- 470 (535)
T 2h8h_A 418 ----------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--N--- 470 (535)
T ss_dssp ----------------------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--H---
T ss_pred ----------------------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--H---
Confidence 111222345678999999998899999999999999999999 999994321 1
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhccC
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVSS 713 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 713 (714)
.+.+... .....+ .... .....+.++|.+||+.||++|||+++|++.|+++..+.
T Consensus 471 ~~~~~~i-~~~~~~------~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 471 REVLDQV-ERGYRM------PCPP-----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHHHHH-HTTCCC------CCCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHHHHH-HcCCCC------CCCC-----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 1222221 111110 0111 12236889999999999999999999999999987654
No 112
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=344.68 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=201.9
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCce-eEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK-LLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lV~e~~ 481 (714)
.++||+|+||+||+|.+.+ +..||+|++..... ...+.+.+|++++++++||||+++++++...+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 4689999999999998643 23799999986533 4457899999999999999999999999876655 9999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
.+|+|.+++.... ..+++..+..|+.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 106 ~~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 106 CHGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp TTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred cCCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999998643 458899999999999999999999 89999999999999999999999999999765322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
... .........+|+.|+|||.+.+..++.++||||||+++|||++|..|+.....
T Consensus 178 ~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~ 233 (298)
T 3pls_A 178 EYY------------------------SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID 233 (298)
T ss_dssp GGG------------------------CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred ccc------------------------ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC
Confidence 100 01122334568889999999999999999999999999999997666533222
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
..++...+ ..... ...... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 234 -~~~~~~~~----~~~~~------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 234 -PFDLTHFL----AQGRR------LPQPEY-----CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp -GGGHHHHH----HTTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHh----hcCCC------CCCCcc-----chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 22222211 11111 001111 123688999999999999999999999999998654
No 113
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.8e-41 Score=356.17 Aligned_cols=260 Identities=25% Similarity=0.383 Sum_probs=203.6
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 108 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECC
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeec
Confidence 4799999999999985 3588999999988776667789999999999999999999999874 45688999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 109 PSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp TTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 9999999997542 358999999999999999999999 89999999999999999999999999999865322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.. .........||..|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 181 ~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~ 235 (327)
T 3lxl_A 181 KD-------------------------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA 235 (327)
T ss_dssp CS-------------------------EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH
T ss_pred Cc-------------------------cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc
Confidence 11 01122334578889999999888899999999999999999999999843211
Q ss_pred Cc---------chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 642 SE---------MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 642 ~~---------~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.. ......+........ ...... .....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 236 EFLRMMGCERDVPALSRLLELLEEGQ------RLPAPP-----ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHCC----CCHHHHHHHHHHTTC------CCCCCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred hhhhhcccccccccHHHHHHHhhccc------CCCCCC-----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 00 000011111111111 011111 1223688999999999999999999999999988643
No 114
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9e-41 Score=355.95 Aligned_cols=265 Identities=15% Similarity=0.191 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEEC----CCcEEEEEEeCCCCch-----------hHHHHHHHHHHHhccCCCCccceEEEEEe---
Q 005102 409 FVLGKSGIGIVYKVVLE----DGHTLAVRRLGEGGSQ-----------RFKEFQTEVEAIGKIRHSNIVTLRAYYWS--- 470 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~--- 470 (714)
+.||+|+||.||+|.+. ++..||||++...... ....+.+|+..++.++||||+++++++..
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 47999999999999986 5789999998765322 11346788999999999999999999988
Q ss_pred -CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC--Ce
Q 005102 471 -VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM--EP 547 (714)
Q Consensus 471 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--~~ 547 (714)
....++||||+ +++|.+++... ..+++.++++|+.||+.||+|||+ .+|+||||||+|||++.++ .+
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQN------GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGG------GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTSE
T ss_pred CCcEEEEEEecc-CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCcE
Confidence 67889999999 99999999755 368999999999999999999999 8999999999999998877 99
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILL 627 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ 627 (714)
||+|||+++.+......... .........||+.|+|||++.+..++.++|||||||++|
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 251 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQY---------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCML 251 (345)
T ss_dssp EECCCTTCEESSGGGCCCCC---------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred EEEeCCCceecccccccccc---------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHH
Confidence 99999999876432211000 011123456789999999999989999999999999999
Q ss_pred HHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 628 EMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 628 elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
||+||+.||.................... +........... ....++.+++.+||+.||++|||+++|++.|+
T Consensus 252 ell~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 252 RWLCGKLPWEQNLKDPVAVQTAKTNLLDE---LPQSVLKWAPSG----SSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHSSCTTGGGTTCHHHHHHHHHHHHHT---TTHHHHHHSCTT----SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHhCCCCccccccccHHHHHHHHhhccc---ccHHHHhhcccc----ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 99999999954333222222222111111 111111100000 11236889999999999999999999999999
Q ss_pred hhhc
Q 005102 708 RLIV 711 (714)
Q Consensus 708 ~i~~ 711 (714)
++..
T Consensus 325 ~~~~ 328 (345)
T 2v62_A 325 PHGI 328 (345)
T ss_dssp TTCC
T ss_pred ccCC
Confidence 8653
No 115
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.2e-41 Score=356.51 Aligned_cols=257 Identities=22% Similarity=0.343 Sum_probs=200.5
Q ss_pred ccccccCceEEEEEEEC-----CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeC--CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-----DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 480 (714)
+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++||||
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 116 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence 47999999999998753 58899999998753 33456799999999999999999999999874 567899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++... .+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 117 ~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 117 VPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp CTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred ccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999654 38999999999999999999999 8999999999999999999999999999986542
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
... .........+|..|+|||.+.+..++.++||||||+++|||+||+.||....
T Consensus 187 ~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~ 241 (318)
T 3lxp_A 187 GHE-------------------------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPP 241 (318)
T ss_dssp TCS-------------------------EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred ccc-------------------------ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccc
Confidence 210 0112233456888999999998889999999999999999999999984321
Q ss_pred CCcch---------hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 641 SSEMD---------LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 641 ~~~~~---------l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
..... -...+........ ...... .....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 242 TKFLELIGIAQGQMTVLRLTELLERGE------RLPRPD-----KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHTTC------CCCCCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhcccccchhHHHHHHHHhccc------CCCCCc-----cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11000 0000111111111 011111 122368899999999999999999999999999864
No 116
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-40 Score=341.45 Aligned_cols=239 Identities=21% Similarity=0.278 Sum_probs=175.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+ ++
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 97 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CE
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CC
Confidence 47999999999999964 58999999997642 233567899999999999999999999999999999999999 67
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 98 ~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 166 (275)
T 2eue_A 98 ELFDYIVQR------DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp EHHHHHHTS------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence 888888765 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...
T Consensus 167 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~---- 215 (275)
T 2eue_A 167 ---------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE---- 215 (275)
T ss_dssp -----------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred ---------------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC----
Confidence 1122346888999999987765 78999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
................ ... ....+.+++.+||+.||++|||++|+++
T Consensus 216 -~~~~~~~~~~~~~~~~--------~~~-----~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 216 -SIPVLFKNISNGVYTL--------PKF-----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -SHHHHHHHHHHTCCCC--------CTT-----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CHHHHHHHHHhCCCCC--------Ccc-----CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1222222222222111 111 1225789999999999999999999864
No 117
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=357.25 Aligned_cols=263 Identities=16% Similarity=0.208 Sum_probs=203.6
Q ss_pred ccccccCceEEEEEEECC---------CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccc---------------e
Q 005102 409 FVLGKSGIGIVYKVVLED---------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVT---------------L 464 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~---------------l 464 (714)
+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++ +
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~ 122 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC 122 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence 479999999999999864 789999998754 35789999999999999988 6
Q ss_pred EEEEEe-CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC
Q 005102 465 RAYYWS-VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH 543 (714)
Q Consensus 465 ~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~ 543 (714)
++++.. .+..++||||+ +++|.+++..... ..+++.++..|+.||+.||+|||+ .+|+||||||+|||++.
T Consensus 123 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 123 MGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK----HVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDP 194 (352)
T ss_dssp CEEEEETTTEEEEEEECC-CEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEET
T ss_pred hhccccCCcEEEEEecCC-CcCHHHHHHhCCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcC
Confidence 788876 67789999999 9999999986521 459999999999999999999999 89999999999999999
Q ss_pred CC--CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHH
Q 005102 544 NM--EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYS 621 (714)
Q Consensus 544 ~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS 621 (714)
++ .+||+|||+++........... .........||+.|+|||++.+..++.++||||
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 253 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAY---------------------VEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQS 253 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCC---------------------CTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred CCCceEEEecCcceeeccCCCccccc---------------------cccccccccCCccccCHHHHccCCCCchhhHHH
Confidence 98 8999999999876432211000 011223346789999999999999999999999
Q ss_pred HHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 622 YGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 622 ~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
|||++|||++|+.||.........+........... ....+...... .....+.+++.+||+.||++|||+++
T Consensus 254 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ 326 (352)
T 2jii_A 254 LGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKP---GPFVGPCGHWI----RPSETLQKYLKVVMALTYEEKPPYAM 326 (352)
T ss_dssp HHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSC---CCEECTTSCEE----CCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred HHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCCh---hhhhhhccccC----CCcHHHHHHHHHHHhCChhhCCCHHH
Confidence 999999999999999654433333333332222221 12222111100 01236889999999999999999999
Q ss_pred HHHHHhhhhcc
Q 005102 702 ISDALDRLIVS 712 (714)
Q Consensus 702 vl~~L~~i~~~ 712 (714)
+++.|+++...
T Consensus 327 l~~~L~~~~~~ 337 (352)
T 2jii_A 327 LRNNLEALLQD 337 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 118
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.2e-40 Score=344.16 Aligned_cols=256 Identities=25% Similarity=0.372 Sum_probs=197.7
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEe-CCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-VDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~~ 481 (714)
.+.||+|+||.||+|++.+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 3589999999999999653 2368999988643 3445779999999999999999999999754 55789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++..+..|+.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 110 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 110 KHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp TTCBHHHHHHCTT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999997643 458899999999999999999999 89999999999999999999999999999865322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCC-CccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGR-TAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~-~p~~~~~ 640 (714)
... .........+|+.|+|||.+.+..++.++||||||+++|||++|. +||....
T Consensus 182 ~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 237 (298)
T 3f66_A 182 EYY------------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237 (298)
T ss_dssp GGC------------------------BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred chh------------------------ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC
Confidence 100 011223345678899999999889999999999999999999955 4553222
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
. .+... ........ ..+ .. ....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 238 ~--~~~~~---~~~~~~~~----~~~---~~-----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 238 T--FDITV---YLLQGRRL----LQP---EY-----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp T--TTHHH---HHHTTCCC----CCC---TT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H--HHHHH---HHhcCCCC----CCC---cc-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1 11111 11111110 011 11 123688999999999999999999999999998764
No 119
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=351.16 Aligned_cols=239 Identities=23% Similarity=0.242 Sum_probs=187.2
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||+||+|++. +|+.||||++.... ......+..|+..+.++ +||||++++++|.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 357999999999999987 69999999987643 23334566677766666 8999999999999999999999999 6
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++.... ..++|..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 141 ~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 141 PSLQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp CBHHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 79999887653 459999999999999999999999 89999999999999999999999999998754321
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.......||+.|+|||++.+ .++.++|||||||++|||++|..|+...
T Consensus 211 ---------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~---- 258 (311)
T 3p1a_A 211 ---------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG---- 258 (311)
T ss_dssp -------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----
T ss_pred ---------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----
Confidence 11223457999999999876 7999999999999999999998776321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. + .. +.... ......+ .....+.+++.+||+.||++|||++|+++
T Consensus 259 ~~---~-~~-~~~~~-~~~~~~~---------~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 259 EG---W-QQ-LRQGY-LPPEFTA---------GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HH---H-HH-HTTTC-CCHHHHT---------TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cH---H-HH-HhccC-CCccccc---------CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11 1 11 11111 0000000 11236889999999999999999999975
No 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.1e-40 Score=340.42 Aligned_cols=244 Identities=20% Similarity=0.236 Sum_probs=196.8
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|+||.||+|.... +..||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 3579999999999999865 779999999876555668899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~ 563 (714)
.+++... ..+++..+.+|+.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||+++......
T Consensus 94 ~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~- 163 (277)
T 3f3z_A 94 FERVVHK------RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK- 163 (277)
T ss_dssp HHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence 9988754 458999999999999999999999 899999999999999 788999999999987543211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
......||+.|+|||.+.+ .++.++||||||+++|||++|+.||.... .
T Consensus 164 ----------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~ 212 (277)
T 3f3z_A 164 ----------------------------MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT--D 212 (277)
T ss_dssp ----------------------------CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS--H
T ss_pred ----------------------------chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC--H
Confidence 1123357889999999865 48999999999999999999999994322 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+.................. .....+.+++.+||+.||++|||+.|+++
T Consensus 213 ---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 213 ---SEVMLKIREGTFTFPEKDWL---------NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---HHHHHHHHHCCCCCCHHHHT---------TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---HHHHHHHHhCCCCCCchhhh---------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11222222221111100000 11236889999999999999999999975
No 121
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.8e-40 Score=346.74 Aligned_cols=245 Identities=23% Similarity=0.258 Sum_probs=197.4
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 458999999999999986 589999999876422 1357899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC----CeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM----EPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 556 (714)
+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++ .+||+|||+++
T Consensus 97 ~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 97 VSGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCSCBHHHHHHTC------SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred CCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999765 458999999999999999999999 8999999999999999887 79999999997
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||
T Consensus 168 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 218 (321)
T 2a2a_A 168 EIEDGV-----------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218 (321)
T ss_dssp ECCTTC-----------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred ecCccc-----------------------------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCC
Confidence 643211 112335788999999999999999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... . .+................ .. .....+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~--~---~~~~~~i~~~~~~~~~~~----~~-----~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 219 LGDT--K---QETLANITSVSYDFDEEF----FS-----HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCSS--H---HHHHHHHHTTCCCCCHHH----HT-----TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred CCCC--H---HHHHHHHHhcccccChhh----hc-----ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 4321 1 122222222111111000 00 11235789999999999999999999986
No 122
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-40 Score=348.82 Aligned_cols=257 Identities=21% Similarity=0.265 Sum_probs=193.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
++||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 47999999999999965 5899999999876655667899999999985 799999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC---eEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~~~~ 563 (714)
.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++.......
T Consensus 99 ~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 99 LSHIHKR------RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred HHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 9999764 458999999999999999999999 89999999999999998776 99999999876542211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 170 ~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 228 (316)
T 2ac3_A 170 CSP---------------------ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228 (316)
T ss_dssp ---------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccc---------------------ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence 000 00111223457999999999864 4578999999999999999999999954
Q ss_pred CCCCcch----------hHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMD----------LVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~----------l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+.. .................... ......+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 229 RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDW---------AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHH---------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccccccccccccchhHHHHHHHHHhccCcccCchhc---------ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 3322110 01111111111111100000 011236889999999999999999999986
No 123
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.7e-40 Score=341.33 Aligned_cols=239 Identities=24% Similarity=0.348 Sum_probs=192.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|.+.. +..||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence 479999999999999765 7799999986532 122467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~l~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--- 162 (279)
T 3fdn_A 95 TVYRELQKL------SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 162 (279)
T ss_dssp EHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcc---
Confidence 999998754 458999999999999999999999 89999999999999999999999999988643211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 163 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~----- 210 (279)
T 3fdn_A 163 ---------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----- 210 (279)
T ss_dssp --------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-----
T ss_pred ---------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-----
Confidence 112335688999999999999999999999999999999999999432
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............... .... ....+.+++.+||+.||++|||++|+++
T Consensus 211 ~~~~~~~~~~~~~~~--------~~~~-----~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 211 TYQETYKRISRVEFT--------FPDF-----VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp SHHHHHHHHHHTCCC--------CCTT-----SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHhCCCC--------CCCc-----CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 112222222221111 1111 1225789999999999999999999986
No 124
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3e-40 Score=358.49 Aligned_cols=245 Identities=21% Similarity=0.298 Sum_probs=186.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEe----CCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS----VDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~~~lV~e~~~ 482 (714)
++||+|+||+||+|.+. +|+.||||++... ..+.+|++++.++ +||||+++++++.. .+..|+||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 47999999999999986 4899999998642 4577899887554 89999999999875 557899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhhh
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLAN 559 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 559 (714)
+|+|.+++..... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++...
T Consensus 143 gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 143 GGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp SEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 9999999986532 358999999999999999999999 89999999999999997 7899999999997543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 216 ~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 216 SH-----------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp ----------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CC-----------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 11 1122345789999999999999999999999999999999999999543
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....... ............. ..+.. .....++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~-~~~~~i~~~~~~~---~~~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 267 HGLAISP-GMKTRIRMGQYEF---PNPEW------SEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TTCSSCC-SHHHHHHHTCCCC---CTTTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccccccH-HHHHHHHcCcccC---CCccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3221110 0111111111111 01100 112236889999999999999999999986
No 125
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-40 Score=381.70 Aligned_cols=251 Identities=21% Similarity=0.289 Sum_probs=198.3
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE---DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|.+. +++.||||+++... ....++|.+|+++|++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999763 36789999998643 334578999999999999999999999996 4568999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.......
T Consensus 454 g~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 454 GPLNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp EEHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 9999999755 458999999999999999999999 8999999999999999999999999999987643211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~ 642 (714)
. ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 525 ~-------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~- 578 (635)
T 4fl3_A 525 Y-------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG- 578 (635)
T ss_dssp -----------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-
T ss_pred c-------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 0 111122345778999999999899999999999999999999 9999943221
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
. +.... +..... ...... ...++.+++.+||+.||++|||+++|++.|+++..
T Consensus 579 -~---~~~~~-i~~~~~------~~~p~~-----~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 579 -S---EVTAM-LEKGER------MGCPAG-----CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -H---HHHHH-HHTTCC------CCCCTT-----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -H---HHHHH-HHcCCC------CCCCCC-----CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1 11211 112111 111111 22368899999999999999999999999998753
No 126
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.1e-40 Score=367.75 Aligned_cols=243 Identities=22% Similarity=0.254 Sum_probs=188.0
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+|... +|+.||||++... .......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 358999999999999975 5899999999753 233345678999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..+..++.||+.||+|||+. .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 233 ~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 302 (446)
T 4ejn_A 233 GELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-- 302 (446)
T ss_dssp CBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCC--
Confidence 9999999754 4589999999999999999999952 58999999999999999999999999999753211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 303 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--- 353 (446)
T 4ejn_A 303 --------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--- 353 (446)
T ss_dssp ------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred --------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC---
Confidence 112234567999999999999999999999999999999999999994321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
..............+ .... ...+.+++.+||+.||++|| |++|+++
T Consensus 354 --~~~~~~~i~~~~~~~--------p~~~-----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 354 --HEKLFELILMEEIRF--------PRTL-----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --HHHHHHHHHHCCCCC--------CTTS-----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --HHHHHHHHHhCCCCC--------CccC-----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 122222222222111 1111 13578999999999999999 9999875
No 127
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3e-40 Score=351.86 Aligned_cols=239 Identities=23% Similarity=0.383 Sum_probs=192.3
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+. |
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g 138 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 138 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-C
Confidence 5799999999999997 4689999999975432 234678999999999999999999999999999999999997 6
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 139 ~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~---- 206 (348)
T 1u5q_A 139 SASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 206 (348)
T ss_dssp EHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC----
Confidence 8888886432 458999999999999999999999 8999999999999999999999999999875421
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 207 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~- 257 (348)
T 1u5q_A 207 ----------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN- 257 (348)
T ss_dssp ----------------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-
T ss_pred ----------------------------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 11235789999999984 5678999999999999999999999995332
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+........ +...... ....+.+++.+||+.||++|||++++++
T Consensus 258 ----~~~~~~~~~~~~~-------~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 258 ----AMSALYHIAQNES-------PALQSGH----WSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ----HHHHHHHHHHSCC-------CCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----hHHHHHHHHhcCC-------CCCCCCC----CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1122222222211 1111111 1235789999999999999999999875
No 128
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2e-40 Score=359.32 Aligned_cols=267 Identities=22% Similarity=0.276 Sum_probs=197.7
Q ss_pred cccccc--CceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKS--GIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 110 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence 479999 99999999987 58999999997643 33456788999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++..... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+........
T Consensus 111 ~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 111 GSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp CBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred CCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 999999976532 358999999999999999999999 8999999999999999999999999999875432211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 184 ~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 184 RQR---------------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp ECS---------------------CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccc---------------------ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 000 00112233467899999999987 5789999999999999999999999954332
Q ss_pred CcchhHHHHHHHHhhc----C-C----------------cccccC---C-----CCCCCCCcHHHHHHHHHHHhHccCCC
Q 005102 642 SEMDLVNWMQLCIEEK----K-P----------------LADVLD---P-----YLAPDADKEEEIIAVLKIAMACVHSS 692 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~----~-~----------------~~~~~d---~-----~~~~~~~~~~~~~~l~~li~~Cl~~d 692 (714)
... +...+....... . + ..+... + ..............+.+++.+||+.|
T Consensus 243 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 321 (389)
T 3gni_B 243 TQM-LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321 (389)
T ss_dssp TTH-HHHC--------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred HHH-HHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence 221 111110000000 0 0 000000 0 00000001112346889999999999
Q ss_pred CCCCCCHHHHHH
Q 005102 693 PEKRPTMRHISD 704 (714)
Q Consensus 693 P~~RPt~~evl~ 704 (714)
|++|||++|+++
T Consensus 322 P~~Rpta~ell~ 333 (389)
T 3gni_B 322 PDARPSASTLLN 333 (389)
T ss_dssp TTTSCCHHHHTT
T ss_pred cccCCCHHHHhc
Confidence 999999999974
No 129
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.2e-41 Score=363.57 Aligned_cols=245 Identities=22% Similarity=0.258 Sum_probs=194.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+++. ++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.+..|+||||+++|
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 154 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 579999999999999864 8899999986521 112235789999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+|+......
T Consensus 155 ~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~-- 222 (410)
T 3v8s_A 155 DLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-- 222 (410)
T ss_dssp EHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--
T ss_pred cHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--
Confidence 999999643 48899999999999999999999 899999999999999999999999999997643211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC----CCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK----PSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 223 -------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~- 276 (410)
T 3v8s_A 223 -------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD- 276 (410)
T ss_dssp -------------------------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-
T ss_pred -------------------------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-
Confidence 11233456899999999997655 789999999999999999999999532
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~ 704 (714)
+.............. ..-|.. .. ....+.+++.+||..+|.+ ||+++||++
T Consensus 277 ----~~~~~~~~i~~~~~~---~~~p~~-~~-----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 277 ----SLVGTYSKIMNHKNS---LTFPDD-ND-----ISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp ----SHHHHHHHHHTHHHH---CCCCTT-CC-----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ----ChhhHHHHHHhcccc---ccCCCc-cc-----ccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 112222222221100 000100 01 1235789999999999988 999999875
No 130
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.3e-40 Score=342.58 Aligned_cols=260 Identities=15% Similarity=0.177 Sum_probs=198.7
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEE-EeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY-WSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|+. .+++.||||++...... +.+.+|++++++++|++++..++++ ...+..++||||+ +++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 5799999999999997 46899999987654322 3578899999999988877777666 5566789999999 9999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~ 563 (714)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+||+|||+++.......
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 92 EDLFNFCS-----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 99997543 458999999999999999999999 899999999999999 7889999999999987643221
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
..... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 164 ~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 4hgt_A 164 HQHIP---------------------YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp CCBCC---------------------CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred CccCC---------------------CCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh
Confidence 10000 112234567899999999999999999999999999999999999995433222
Q ss_pred c-hhHH-HHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 644 M-DLVN-WMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 644 ~-~l~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
. .... ........ + ....... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 223 ~~~~~~~~~~~~~~~--~-~~~~~~~---------~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 223 KRQKYERISEKKMST--P-IEVLCKG---------YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp SSSHHHHHHHHHHHS--C-HHHHTTT---------SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccccc--h-hhhhhcc---------CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 1 1111 11111111 1 0111111 123688999999999999999999999999998753
No 131
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-40 Score=363.24 Aligned_cols=248 Identities=23% Similarity=0.276 Sum_probs=195.4
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
++||+|+||+||+|++++ ++.||||++.+.. ......+.+|+.++..++||||++++++|.+.+..|+||||+++|
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg 159 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGG 159 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCC
Confidence 579999999999999875 7899999997531 112234889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++++||+|||+|+......
T Consensus 160 ~L~~~l~~~~-----~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~-- 229 (437)
T 4aw2_A 160 DLLTLLSKFE-----DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-- 229 (437)
T ss_dssp BHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--
T ss_pred cHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--
Confidence 9999998643 458999999999999999999999 899999999999999999999999999997543211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 230 -------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 230 -------------------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp -------------------------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -------------------------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 11223456899999999986 566899999999999999999999999532
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCC--CCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEK--RPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~ 704 (714)
. ..+.......... ...-|...... ...+.+++.+||..+|++ ||+++|+++
T Consensus 285 --~---~~~~~~~i~~~~~---~~~~p~~~~~~-----s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 285 --S---LVETYGKIMNHKE---RFQFPTQVTDV-----SENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp --S---HHHHHHHHHTHHH---HCCCCSSCCCS-----CHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred --C---hhHHHHhhhhccc---cccCCcccccC-----CHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1 1222222222110 00011111111 225789999999988888 999999875
No 132
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-40 Score=346.12 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=203.6
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|.+.. +..||+|++.... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 97 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 479999999999999875 8899999997643 34578999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----- 165 (288)
T 3kfa_A 98 DYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----- 165 (288)
T ss_dssp HHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-----
T ss_pred HHHHhccc----CCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-----
Confidence 99976432 458999999999999999999999 899999999999999999999999999998653211
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 166 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~ 221 (288)
T 3kfa_A 166 ----------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQV 221 (288)
T ss_dssp ----------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGH
T ss_pred ----------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 011112234677999999998899999999999999999999 9999843321 122
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
...+ .... ....... ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 222 ~~~~----~~~~------~~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 222 YELL----EKDY------RMERPEG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp HHHH----HTTC------CCCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHH----hccC------CCCCCCC-----CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 2111 1111 0111111 12368899999999999999999999999998764
No 133
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.4e-40 Score=344.54 Aligned_cols=256 Identities=20% Similarity=0.311 Sum_probs=193.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 117 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 117 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSC
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCC
Confidence 57999999999999974 6899999999753 2334567899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++...... ...+++..+.+++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 118 ~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~-- 190 (310)
T 2wqm_A 118 DLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-- 190 (310)
T ss_dssp BHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC--
Confidence 999998642110 1458999999999999999999999 899999999999999999999999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 191 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-- 242 (310)
T 2wqm_A 191 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-- 242 (310)
T ss_dssp ----------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC--
T ss_pred --------------------------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh--
Confidence 1112234688899999999999999999999999999999999999543222
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
............. +..... .....+.+++.+||+.||++|||+++|++.|+++..
T Consensus 243 -~~~~~~~~~~~~~-------~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 243 -LYSLCKKIEQCDY-------PPLPSD----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -HHHHHHHHHTTCS-------CCCCTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHhhcccC-------CCCccc----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 2222222211111 111101 112368899999999999999999999999999864
No 134
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=351.26 Aligned_cols=265 Identities=24% Similarity=0.312 Sum_probs=193.4
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHH--HhccCCCCccceEEEEEe-----CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEA--IGKIRHSNIVTLRAYYWS-----VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....++||||+
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 4799999999999987 58999999997543 2344444444 556899999999987653 22468999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CceecCCCCCCeeeCCCCCeEEccc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK---------KYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~---------~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
++|+|.+++... ..++..+.+|+.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 95 ~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 95 PNGSLXKYLSLH-------TSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred CCCcHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 999999999654 35899999999999999999999 7 9999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-------CCCCchhhhHHHHHH
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-------VKPSQKWDIYSYGVI 625 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~~DVwS~Gvv 625 (714)
|+++.......... ...........||+.|+|||++.+ ..++.++|||||||+
T Consensus 165 G~a~~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~i 224 (336)
T 3g2f_A 165 GLSMRLTGNRLVRP--------------------GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLI 224 (336)
T ss_dssp TTCEECSSSSCC-----------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHH
T ss_pred cceeecccccccCc--------------------cccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHH
Confidence 99986543211000 000112234568999999999986 356789999999999
Q ss_pred HHHHHhCCCccccCCCCcchh------------HHHHHHHHhhcCCcccccCCCCCCCC-CcHHHHHHHHHHHhHccCCC
Q 005102 626 LLEMITGRTAVVQVGSSEMDL------------VNWMQLCIEEKKPLADVLDPYLAPDA-DKEEEIIAVLKIAMACVHSS 692 (714)
Q Consensus 626 l~elltG~~p~~~~~~~~~~l------------~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~l~~li~~Cl~~d 692 (714)
+|||+||+.||.......... ...+........ ..+.+.... ........+.+++.+||+.|
T Consensus 225 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (336)
T 3g2f_A 225 YWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK-----QRPKFPEAWKENSLAVRSLKETIEDCWDQD 299 (336)
T ss_dssp HHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC-----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSS
T ss_pred HHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccc-----cCCCCCcccccccchHHHHHHHHHHHhcCC
Confidence 999999988874432221100 011111111111 111111111 11235567999999999999
Q ss_pred CCCCCCHHHHHHHHhhhhcc
Q 005102 693 PEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 693 P~~RPt~~evl~~L~~i~~~ 712 (714)
|++|||++|+++.|+++...
T Consensus 300 P~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 300 AEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp GGGSCCHHHHHHHHHHHHHC
T ss_pred hhhCcchHHHHHHHHHHHHH
Confidence 99999999999999998754
No 135
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.9e-40 Score=341.52 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=197.5
Q ss_pred ccccccCceEEEEEEECC----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|++.+ +..||||++.... ....+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 96 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPY 96 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCC
Confidence 579999999999998653 3469999998753 3445789999999999999999999999864 567899999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 167 (281)
T 3cc6_A 97 GELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED- 167 (281)
T ss_dssp CBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred CCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccccc-
Confidence 99999997543 358999999999999999999999 899999999999999999999999999998653211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~ 642 (714)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 168 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~ 221 (281)
T 3cc6_A 168 --------------------------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 221 (281)
T ss_dssp -------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG
T ss_pred --------------------------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH
Confidence 011123345778999999988899999999999999999998 99999543222
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
+....+ ..... . ..... ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 222 --~~~~~~---~~~~~-~------~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 222 --DVIGVL---EKGDR-L------PKPDL-----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp --GHHHHH---HHTCC-C------CCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHH---hcCCC-C------CCCCC-----CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 222211 11111 0 01111 12358899999999999999999999999998864
No 136
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.1e-40 Score=340.60 Aligned_cols=261 Identities=15% Similarity=0.168 Sum_probs=200.1
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEE-EeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY-WSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|+. .+|+.||||++...... +.+.+|++++++++|++++..++++ ...+..++||||+ +++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 4799999999999997 56899999998765433 4688999999999998877766665 4566779999999 8999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~ 563 (714)
.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+ ++++.+||+|||+++.......
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 92 EDLFNFCS-----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 99997443 458999999999999999999999 899999999999999 4788999999999987643221
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.... .........||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 164 ~~~~---------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 3uzp_A 164 HQHI---------------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp CCBC---------------------CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred cccc---------------------ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh
Confidence 1000 0112234567899999999999999999999999999999999999995433221
Q ss_pred -chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 644 -MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 644 -~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
......+...... .+ .....+. ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 223 ~~~~~~~~~~~~~~-~~-~~~~~~~---------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 223 KRQKYERISEKKMS-TP-IEVLCKG---------YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp SSSHHHHHHHHHHH-SC-HHHHTTT---------SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccccC-Cc-hHHHHhh---------CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 1122111111111 11 0111111 113688999999999999999999999999998754
No 137
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.6e-40 Score=347.47 Aligned_cols=259 Identities=23% Similarity=0.360 Sum_probs=193.0
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCC-----ceeE
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD-----EKLL 476 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~l 476 (714)
.+.||+|+||.||+|.+.. +..||||++.... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 4579999999999998642 4589999987643 334567999999999999999999999998755 3499
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
||||+++|+|.+++...........+++..+.+|+.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCcce
Confidence 99999999999998543211122569999999999999999999999 899999999999999999999999999998
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p 635 (714)
....... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus 196 ~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 249 (313)
T 3brb_A 196 KIYSGDY--------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249 (313)
T ss_dssp -----------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ecccccc--------------------------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCC
Confidence 6542210 011123345778999999999999999999999999999999 8888
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
|..... ..... ....... +..... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 250 ~~~~~~--~~~~~---~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 250 YPGVQN--HEMYD---YLLHGHR-------LKQPED-----CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp STTCCG--GGHHH---HHHTTCC-------CCCBTT-----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccCCH--HHHHH---HHHcCCC-------CCCCcc-----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 843322 11211 1111111 111111 223688999999999999999999999999998754
No 138
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=349.93 Aligned_cols=259 Identities=24% Similarity=0.384 Sum_probs=203.1
Q ss_pred ccccccCceEEEEEEE-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC--ceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVL-----EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--EKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~~ 481 (714)
+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 126 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCC
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECC
Confidence 5799999999999984 358999999998876666788999999999999999999999987654 679999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++.++.+++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 127 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 127 PYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp TTCBHHHHHHHST-----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 9999999997653 358999999999999999999999 89999999999999999999999999999865422
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC-
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG- 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~- 640 (714)
.. .........++..|+|||.+.+..++.++||||||+++|||+||+.|+....
T Consensus 199 ~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 253 (326)
T 2w1i_A 199 KE-------------------------YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 253 (326)
T ss_dssp CS-------------------------EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH
T ss_pred cc-------------------------ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH
Confidence 10 0111223345778999999988889999999999999999999999984210
Q ss_pred -------CCc--chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 641 -------SSE--MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 641 -------~~~--~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
... ......+......... ..... ....++.+++.+||+.||++|||++|+++.|+++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 254 EFMRMIGNDKQGQMIVFHLIELLKNNGR------LPRPD-----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHHCTTCCTHHHHHHHHHHHHTTCC------CCCCT-----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhhccccchhhhHHHHHHHhhcCCC------CCCCC-----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000 0011111111111110 00111 122368899999999999999999999999999865
No 139
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.5e-40 Score=342.73 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=197.4
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 410 VLGKSGIGIVYKVVLE---DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 7999999999999653 36899999997653 23357899999999999999999999999 667789999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 103 ~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 103 PLNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CHHHHHHhC------cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 999999765 458999999999999999999999 89999999999999999999999999999765322100
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~ 643 (714)
........+++.|+|||.+.+..++.++||||||+++|||+| |+.||.... .
T Consensus 174 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~ 226 (291)
T 1xbb_A 174 -------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--G 226 (291)
T ss_dssp -------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--H
T ss_pred -------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--H
Confidence 111222345778999999988889999999999999999999 999994322 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
..+ .. ....... +..... ....+.+++.+||+.||++|||+.++++.|+++..
T Consensus 227 ~~~---~~-~~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 227 SEV---TA-MLEKGER------MGCPAG-----CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp HHH---HH-HHHTTCC------CCCCTT-----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHH---HH-HHHcCCC------CCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 11 1111111 111111 12368899999999999999999999999999864
No 140
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=350.34 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=193.6
Q ss_pred ccccccCceEEEEEEECC-Cc----EEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLED-GH----TLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|++.. ++ .||+|.+... .....+.+.+|+.++++++||||+++++++... ..++||||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~~~ 99 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 99 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECCCS
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEecC
Confidence 479999999999999753 44 3578877654 334567899999999999999999999999865 4889999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 100 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp SCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 999999997653 458999999999999999999999 899999999999999999999999999998754321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
. ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 172 ~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~ 225 (327)
T 3lzb_A 172 K--------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225 (327)
T ss_dssp ----------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred c--------------------------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH
Confidence 1 111122345778999999999999999999999999999999 9999953322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
..+... ...... ...... ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 226 --~~~~~~----~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 226 --SEISSI----LEKGER------LPQPPI-----CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --GGHHHH----HHTTCC------CCCCTT-----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --HHHHHH----HHcCCC------CCCCcc-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 222221 111111 001111 12358899999999999999999999999998864
No 141
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.3e-40 Score=340.31 Aligned_cols=247 Identities=21% Similarity=0.319 Sum_probs=190.9
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 358999999999999975 48999999987653 3345789999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhccC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~ 562 (714)
|.+++...... ...+++..+..|+.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++......
T Consensus 107 L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 107 LLERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp HHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred HHHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99988543110 0458999999999999999999999 899999999999999 456789999999997643211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
......||+.|+|||.+. ..++.++||||||+++|||++|+.||....
T Consensus 182 -----------------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~-- 229 (285)
T 3is5_A 182 -----------------------------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-- 229 (285)
T ss_dssp ----------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred -----------------------------cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC--
Confidence 112345788999999985 568999999999999999999999994321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
................ ... .. ....+.+++.+||+.||++|||++|+++
T Consensus 230 ---~~~~~~~~~~~~~~~~----~~~-~~-----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 230 ---LEEVQQKATYKEPNYA----VEC-RP-----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---HHHHHHHHHHCCCCCC----C---CC-----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---HHHHHhhhccCCcccc----ccc-Cc-----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122221111111110 000 00 1235779999999999999999999975
No 142
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.6e-40 Score=362.35 Aligned_cols=251 Identities=21% Similarity=0.288 Sum_probs=187.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 479 (714)
+.||+|+||+||+|.+. +|+.||||++... .....+.+.+|+.+++.++||||+++++++...+ +.|+|||
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E 147 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence 47999999999999975 4899999999764 3344567899999999999999999999997543 4699999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++ +|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+...
T Consensus 148 ~~~~-~l~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 148 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp CCSE-EHHHHHT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred CCCC-CHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 9976 5777664 248899999999999999999999 899999999999999999999999999998653
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 216 ~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 216 TS-----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp -C-----------------------------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC-----------------------------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 21 1122346799999999999999999999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccc--------------------------cCCCCCCCCC--cHHHHHHHHHHHhHccCC
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADV--------------------------LDPYLAPDAD--KEEEIIAVLKIAMACVHS 691 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~--------------------------~d~~~~~~~~--~~~~~~~l~~li~~Cl~~ 691 (714)
+..+....+.... +.+..+. ......+... .......+.+++.+||+.
T Consensus 267 --~~~~~~~~i~~~l--g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~ 342 (464)
T 3ttj_A 267 --DYIDQWNKVIEQL--GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342 (464)
T ss_dssp --SHHHHHHHHHHHH--CSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCS
T ss_pred --CHHHHHHHHHHhc--CCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCC
Confidence 1111111111100 0000000 0000000000 111245689999999999
Q ss_pred CCCCCCCHHHHHH
Q 005102 692 SPEKRPTMRHISD 704 (714)
Q Consensus 692 dP~~RPt~~evl~ 704 (714)
||++|||++|+++
T Consensus 343 dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 343 DPAKRISVDDALQ 355 (464)
T ss_dssp STTTSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999875
No 143
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=351.67 Aligned_cols=244 Identities=21% Similarity=0.315 Sum_probs=188.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCC--CCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRH--SNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++| |||+++++++...+..++|||| .+|
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~ 93 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNI 93 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSE
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCC
Confidence 479999999999999988999999998754 33345679999999999976 9999999999999999999995 588
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..|+.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 94 ~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~- 162 (343)
T 3dbq_A 94 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT- 162 (343)
T ss_dssp EHHHHHHHS------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcccc-
Confidence 999999865 458999999999999999999999 8999999999999997 57899999999986542210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----------CCCCchhhhHHHHHHHHHHHhCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----------VKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
........||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 163 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 217 (343)
T 3dbq_A 163 -------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217 (343)
T ss_dssp --------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence 111223467999999999864 67899999999999999999999
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.||..... ............. ........ ...+.+++.+||+.||++|||++|+++
T Consensus 218 ~pf~~~~~----~~~~~~~~~~~~~------~~~~~~~~-----~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 218 TPFQQIIN----QISKLHAIIDPNH------EIEFPDIP-----EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CTTTTCCS----HHHHHHHHHCTTS------CCCCCCCS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Ccchhhhh----HHHHHHHHhcCCc------ccCCcccC-----CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 99953221 1111111111111 01111111 125789999999999999999999975
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.7e-40 Score=338.34 Aligned_cols=244 Identities=23% Similarity=0.291 Sum_probs=195.6
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|.+.. |+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 91 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence 479999999999999764 8999999987542 3345678899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC---eEEcccchhhhhhccC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLARLANIAG 562 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~~~ 562 (714)
|.+.+... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++......
T Consensus 92 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~- 161 (284)
T 3kk8_A 92 LFEDIVAR------EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS- 161 (284)
T ss_dssp HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS-
T ss_pred HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC-
Confidence 99988755 458999999999999999999999 89999999999999986655 999999998754321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-- 211 (284)
T 3kk8_A 162 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-- 211 (284)
T ss_dssp ----------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred ----------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--
Confidence 11123457889999999999999999999999999999999999994321
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .............. ..+.. . .....+.+++.+||+.||++|||++|+++
T Consensus 212 ~---~~~~~~~~~~~~~~---~~~~~-~-----~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 212 Q---HRLYAQIKAGAYDY---PSPEW-D-----TVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp H---HHHHHHHHHTCCCC---CTTTT-T-----TSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred h---hHHHHHHHhccccC---Cchhh-c-----ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1 12222222221111 11110 0 11235789999999999999999999976
No 145
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-40 Score=369.40 Aligned_cols=246 Identities=24% Similarity=0.260 Sum_probs=197.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
++||+|+||.||+|+.+ +|+.||||++.+.. ......+.+|+++|++++||||+++++++.+.+..|+||||+++|
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg 269 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 269 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence 57999999999999986 59999999996531 223466889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++..... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++......
T Consensus 270 ~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 270 DLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp BHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 99999976532 348999999999999999999999 899999999999999999999999999997643210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 341 ---------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~- 392 (576)
T 2acx_A 341 ---------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI- 392 (576)
T ss_dssp ---------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-
T ss_pred ---------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-
Confidence 1123468999999999999899999999999999999999999995432211
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~ 704 (714)
............... ..... ...+.+++.+||+.||++|| +++||++
T Consensus 393 ~~~~i~~~i~~~~~~--------~p~~~-----s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 393 KREEVERLVKEVPEE--------YSERF-----SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CHHHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred hHHHHHHHhhccccc--------CCccC-----CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 112222222221111 11111 23678999999999999999 6777764
No 146
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.5e-40 Score=366.55 Aligned_cols=244 Identities=23% Similarity=0.283 Sum_probs=196.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
++||+|+||.||+|+.+ +|+.||||++.+.. ....+.+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 47999999999999986 59999999997542 233467889999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++...... ...+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++......
T Consensus 271 ~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~-- 343 (543)
T 3c4z_A 271 DIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-- 343 (543)
T ss_dssp BHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred CHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC--
Confidence 999998764321 1468999999999999999999999 899999999999999999999999999998653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .
T Consensus 344 --------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~ 396 (543)
T 3c4z_A 344 --------------------------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-V 396 (543)
T ss_dssp --------------------------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-C
T ss_pred --------------------------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-h
Confidence 1122346899999999999999999999999999999999999999543221 1
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
......+......... .... ...+.+++.+||+.||++||++
T Consensus 397 ~~~~~~~~i~~~~~~~--------p~~~-----s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 397 ENKELKQRVLEQAVTY--------PDKF-----SPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CHHHHHHHHHHCCCCC--------CTTS-----CHHHHHHHHHHSCSSGGGSCCC
T ss_pred hHHHHHHHHhhcccCC--------Cccc-----CHHHHHHHHHhccCCHhHCCCC
Confidence 2223333333322111 1111 2357899999999999999976
No 147
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.2e-40 Score=350.62 Aligned_cols=245 Identities=21% Similarity=0.251 Sum_probs=193.0
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||.||+|..+ +|+.||||++.+.... +.+|++++.++ +||||+++++++.+.+..|+||||+++|+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~ 102 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCc
Confidence 357999999999999986 4899999999765432 35688899888 79999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC----CCeEEcccchhhhhhcc
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN----MEPHVSDFGLARLANIA 561 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~~~~~ 561 (714)
|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+|||+++.....
T Consensus 103 L~~~i~~~------~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 103 LLDKILRQ------KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp HHHHHHTC------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 99999765 458999999999999999999999 899999999999998543 35999999999865321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 174 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 225 (342)
T 2qr7_A 174 N----------------------------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225 (342)
T ss_dssp T----------------------------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT
T ss_pred C----------------------------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc
Confidence 1 112234578999999999887789999999999999999999999954321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+............. ...... ....+.+++.+||..||++|||++|+++
T Consensus 226 --~~~~~~~~~i~~~~~~~~----~~~~~~-----~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 226 --DTPEEILARIGSGKFSLS----GGYWNS-----VSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --SCHHHHHHHHHHCCCCCC----STTTTT-----SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --CCHHHHHHHHccCCcccC----cccccc-----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222233333322222111 000011 1236789999999999999999999875
No 148
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.7e-40 Score=342.38 Aligned_cols=244 Identities=25% Similarity=0.325 Sum_probs=193.7
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 357999999999999986 5899999999876554556789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~ 563 (714)
.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||+++.....
T Consensus 94 ~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 94 FDRILER------GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp HHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 9998654 458999999999999999999999 899999999999999 78899999999998643211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... .
T Consensus 163 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~ 212 (304)
T 2jam_A 163 ----------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--E 212 (304)
T ss_dssp ----------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--H
T ss_pred ----------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--H
Confidence 0011235788999999999999999999999999999999999994321 1
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............... .+ .... ....+.+++.+||+.||++|||++|+++
T Consensus 213 ---~~~~~~i~~~~~~~~---~~-~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 213 ---SKLFEKIKEGYYEFE---SP-FWDD-----ISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ---HHHHHHHHHCCCCCC---TT-TTTT-----SCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHHcCCCCCC---cc-cccc-----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122222222211110 11 1111 1236889999999999999999999975
No 149
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.1e-40 Score=355.04 Aligned_cols=244 Identities=21% Similarity=0.310 Sum_probs=190.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccC--CCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIR--HSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++...+..++||| +.++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~ 140 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 140 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence 579999999999999988999999998754 3344578999999999996 5999999999999999999999 5688
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..|+.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 141 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~- 209 (390)
T 2zmd_A 141 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT- 209 (390)
T ss_dssp EHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-
Confidence 999999865 458899999999999999999999 8999999999999996 57899999999986532210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----------CCCCchhhhHHHHHHHHHHHhCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----------VKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
........||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 210 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~ 264 (390)
T 2zmd_A 210 -------------------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264 (390)
T ss_dssp -----------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCC
Confidence 111234468999999999865 46899999999999999999999
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.||..... ....+......... ....... ...+.+++.+||+.||++|||++|+++
T Consensus 265 ~Pf~~~~~----~~~~~~~~~~~~~~------~~~~~~~-----~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 265 TPFQQIIN----QISKLHAIIDPNHE------IEFPDIP-----EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CTTTTCCC----HHHHHHHHHCTTSC------CCCCCCS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcchhhhH----HHHHHHHHhCcccc------CCCCccc-----hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 99953221 11112222211110 0111111 235789999999999999999999975
No 150
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=350.89 Aligned_cols=248 Identities=14% Similarity=0.181 Sum_probs=196.9
Q ss_pred ccccccCceEEEEEE------ECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC---CCCccceEEEEEeCCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVV------LEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR---HSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e 479 (714)
+.||+|+||+||+|. ..+++.||||++.... ..++.+|++++.+++ |+||+++++++...+..++|||
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 479999999999994 4468999999997653 356778888888876 9999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-----------CCCeE
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-----------NMEPH 548 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-----------~~~~k 548 (714)
|+++|+|.+++...... ....+++..++.|+.||+.||+|||+ ++|+||||||+|||++. ++.+|
T Consensus 148 ~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred ccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999742110 01469999999999999999999999 89999999999999998 89999
Q ss_pred EcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHH
Q 005102 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 549 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~e 628 (714)
|+|||+|+....... ........||+.|+|||++.+..++.++|||||||++||
T Consensus 224 l~DFG~a~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 277 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPK--------------------------GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYC 277 (365)
T ss_dssp ECCCTTCEEGGGSCT--------------------------TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHH
T ss_pred EeeCchhhhhhccCC--------------------------CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHH
Confidence 999999976532110 112234568999999999999999999999999999999
Q ss_pred HHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCC-CCHHHHHHHHh
Q 005102 629 MITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKR-PTMRHISDALD 707 (714)
Q Consensus 629 lltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R-Pt~~evl~~L~ 707 (714)
|+||+.||........ ........... ...+.+++..|++.+|.+| |+++++.+.|+
T Consensus 278 lltg~~pf~~~~~~~~------------------~~~~~~~~~~~----~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 278 MLFGTYMKVKNEGGEC------------------KPEGLFRRLPH----LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp HHHSSCCCEEEETTEE------------------EECSCCTTCSS----HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred HHhCCCccccCCCCce------------------eechhccccCc----HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 9999999943322111 01111111111 2356688999999999999 78899999988
Q ss_pred hhhc
Q 005102 708 RLIV 711 (714)
Q Consensus 708 ~i~~ 711 (714)
++..
T Consensus 336 ~~l~ 339 (365)
T 3e7e_A 336 KVFQ 339 (365)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=341.61 Aligned_cols=242 Identities=22% Similarity=0.347 Sum_probs=176.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence 47999999999999974 68999999986532 223467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 166 (278)
T 3cok_A 97 EMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-- 166 (278)
T ss_dssp EHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred cHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC--
Confidence 9999998653 458999999999999999999999 899999999999999999999999999987643211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 167 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 220 (278)
T 3cok_A 167 --------------------------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT 220 (278)
T ss_dssp ---------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--
T ss_pred --------------------------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH
Confidence 011223468889999999988899999999999999999999999953322110
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. .. ... +...... ....+.+++.+||+.||++|||++++++
T Consensus 221 -----~~----~~-~~~---~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 221 -----LN----KV-VLA---DYEMPSF-----LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------------C-CSS---CCCCCTT-----SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HH----HH-hhc---ccCCccc-----cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00 00 000 1111111 1236789999999999999999999875
No 152
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.5e-40 Score=346.78 Aligned_cols=260 Identities=24% Similarity=0.338 Sum_probs=202.4
Q ss_pred cccccccCceEEEEEEE------CCCcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCC-ceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVL------EDGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVD-EKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~~lV~ 478 (714)
.+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 35799999999999985 2468999999987543 3446799999999999 7999999999998755 489999
Q ss_pred eccCCCCHhhhhhCCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeE
Q 005102 479 DYIPNGSLATALHGKPGMV----------SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPH 548 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 548 (714)
||+++|+|.+++....... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEE
Confidence 9999999999998654210 01238899999999999999999999 8999999999999999999999
Q ss_pred EcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHH
Q 005102 549 VSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLE 628 (714)
Q Consensus 549 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~e 628 (714)
|+|||+++....... ........||+.|+|||.+.+..++.++||||||+++||
T Consensus 189 l~Dfg~~~~~~~~~~--------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~ 242 (316)
T 2xir_A 189 ICDFGLARDIYKDPD--------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242 (316)
T ss_dssp ECCCGGGSCTTTCTT--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ECCCccccccccCcc--------------------------ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHH
Confidence 999999986532110 011122335778999999998899999999999999999
Q ss_pred HHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 629 MIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 629 llt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
|+| |+.||....... . +......... ...... ....+.+++.+||+.||++|||++|+++.|+
T Consensus 243 l~t~g~~p~~~~~~~~-~----~~~~~~~~~~------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 243 IFSLGASPYPGVKIDE-E----FCRRLKEGTR------MRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp HHTTSCCSSTTCCCSH-H----HHHHHHHTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhCCCCCCcccchhH-H----HHHHhccCcc------CCCCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 998 999995432221 1 1111222111 111111 1235889999999999999999999999999
Q ss_pred hhhcc
Q 005102 708 RLIVS 712 (714)
Q Consensus 708 ~i~~~ 712 (714)
++...
T Consensus 307 ~~~~~ 311 (316)
T 2xir_A 307 NLLQA 311 (316)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98753
No 153
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.6e-40 Score=341.12 Aligned_cols=242 Identities=19% Similarity=0.311 Sum_probs=196.7
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+|...+ ++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 3589999999999999874 789999998754 223456789999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 100 ~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 169 (294)
T 2rku_A 100 RSLLELHKRR------KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 169 (294)
T ss_dssp CBHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc-
Confidence 9999988754 458999999999999999999999 899999999999999999999999999987643211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 170 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--- 219 (294)
T 2rku_A 170 ---------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--- 219 (294)
T ss_dssp ---------------------------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS---
T ss_pred ---------------------------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---
Confidence 01123456889999999998889999999999999999999999994321
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+........... ..... ...+.+++.+||+.||++|||++|+++
T Consensus 220 --~~~~~~~~~~~~~~--------~~~~~-----~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 220 --LKETYLRIKKNEYS--------IPKHI-----NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp --HHHHHHHHHTTCCC--------CCTTS-----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --HHHHHHHHhhccCC--------Ccccc-----CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11112222111111 11111 125789999999999999999999886
No 154
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-39 Score=335.81 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=197.8
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 357999999999999986 58999999987543 3345778999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 160 (276)
T 2yex_A 92 LFDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 160 (276)
T ss_dssp GGGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred HHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc--
Confidence 99998754 458999999999999999999999 8999999999999999999999999999876532110
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
........||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........
T Consensus 161 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 216 (276)
T 2yex_A 161 ------------------------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (276)
T ss_dssp ------------------------ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH
T ss_pred ------------------------hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 111233457889999999987665 7899999999999999999999965433322
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+. ..... ..+ .......+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~----~~~~~----~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 217 EYSDWK----EKKTY----LNP-------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHH----TTCTT----STT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHhh----hcccc----cCc-------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 222221 11100 000 0112235789999999999999999999875
No 155
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.4e-40 Score=346.40 Aligned_cols=258 Identities=21% Similarity=0.329 Sum_probs=202.4
Q ss_pred cccccccCceEEEEEEEC------CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLE------DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 357999999999999865 368899999986533 3445789999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCC----CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 481 IPNGSLATALHGKPG----MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~----~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
+++|+|.+++..... ......+++..+.+++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~Dfg~~~ 186 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEECcCcccc
Confidence 999999999864210 0001347899999999999999999999 899999999999999999999999999998
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTA 635 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p 635 (714)
....... ........+|+.|+|||.+.+..++.++||||||+++|||+| |+.|
T Consensus 187 ~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 240 (322)
T 1p4o_A 187 DIYETDY--------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240 (322)
T ss_dssp GGGGGGC--------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred ccccccc--------------------------cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCc
Confidence 6542210 111222345778999999998899999999999999999999 8888
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
|.... ............. . ..... ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 241 ~~~~~-----~~~~~~~~~~~~~--~-----~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 241 YQGLS-----NEQVLRFVMEGGL--L-----DKPDN-----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TTTSC-----HHHHHHHHHTTCC--C-----CCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cccCC-----HHHHHHHHHcCCc--C-----CCCCC-----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 84321 1122222222111 0 01111 22358899999999999999999999999998754
No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.4e-40 Score=348.45 Aligned_cols=256 Identities=20% Similarity=0.244 Sum_probs=192.7
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC-----CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-----GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 458999999999999985 4889999998653 2344578999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCC----------------------------------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 005102 482 PNGSLATALHGKPGM----------------------------------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK 527 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~----------------------------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~ 527 (714)
++|+|.+++...... .....+++..+..|+.|++.||+|||+ .
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~ 187 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---Q 187 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---C
Confidence 999999998521000 000124577788999999999999999 8
Q ss_pred CceecCCCCCCeeeCCCC--CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCC
Q 005102 528 KYVHGDLKPSNILLGHNM--EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAP 605 (714)
Q Consensus 528 ~ivHrDlkp~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 605 (714)
+|+||||||+||+++.++ .+||+|||+++......... ........||+.|+||
T Consensus 188 ~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~------------------------~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE------------------------YYGMTTKAGTPYFVAP 243 (345)
T ss_dssp TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------------------------------CCCGGGCCH
T ss_pred CccccCCChhhEEEecCCCceEEEeeccccccccccCccc------------------------cccccccCCCccccCc
Confidence 999999999999998776 89999999998654321100 1112334578999999
Q ss_pred cccCC--CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHH
Q 005102 606 ESLKV--VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLK 683 (714)
Q Consensus 606 E~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 683 (714)
|.+.+ ..++.++|||||||++|||++|+.||..... .+............. .+. .......+.+
T Consensus 244 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~ 309 (345)
T 3hko_A 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND-----ADTISQVLNKKLCFE---NPN------YNVLSPLARD 309 (345)
T ss_dssp HHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCTT---SGG------GGGSCHHHHH
T ss_pred hhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHhcccccC---Ccc------cccCCHHHHH
Confidence 99965 6789999999999999999999999943221 122222222221110 010 0112236889
Q ss_pred HHhHccCCCCCCCCCHHHHHH
Q 005102 684 IAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 684 li~~Cl~~dP~~RPt~~evl~ 704 (714)
++.+||+.||++|||+.|+++
T Consensus 310 li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 310 LLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999976
No 157
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.7e-40 Score=348.30 Aligned_cols=241 Identities=19% Similarity=0.311 Sum_probs=196.7
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++.+.+ ++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 126 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence 479999999999999865 789999998754 2334567899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 127 ~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-- 195 (335)
T 2owb_A 127 SLLELHKRR------KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-- 195 (335)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred CHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc--
Confidence 999998754 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 196 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---- 245 (335)
T 2owb_A 196 --------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC---- 245 (335)
T ss_dssp --------------------------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS----
T ss_pred --------------------------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC----
Confidence 11123457889999999998889999999999999999999999994321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..+........... +.... ...+.+++.+||+.||++|||++|+++
T Consensus 246 -~~~~~~~~~~~~~~--------~~~~~-----~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 246 -LKETYLRIKKNEYS--------IPKHI-----NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -HHHHHHHHHHTCCC--------CCTTS-----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -HHHHHHHHhcCCCC--------CCccC-----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11222222222111 11111 125778999999999999999999876
No 158
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=352.77 Aligned_cols=236 Identities=17% Similarity=0.274 Sum_probs=192.9
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 478 (714)
.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 357999999999999975 589999999976431 12345778999999999999999999999999999999
Q ss_pred eccCCC-CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 479 DYIPNG-SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 479 e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
||+..| +|.+++... ..+++..+..|+.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.
T Consensus 109 e~~~~g~~l~~~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRH------PRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp ECCTTSCBHHHHHHTC------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeCCCCccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999777 999999765 458999999999999999999999 8999999999999999999999999999976
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||
T Consensus 180 ~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 230 (335)
T 3dls_A 180 LERGK-----------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230 (335)
T ss_dssp CCTTC-----------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCCC-----------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCch
Confidence 53211 1122347899999999988776 88999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
..... ........... ....+.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~~~---------------------~~~~~~~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 231 CELEE---------------------TVEAAIHPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SSGGG---------------------GTTTCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hhHHH---------------------HHhhccCCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 43110 00011110100 12358899999999999999999999873
No 159
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.1e-40 Score=341.47 Aligned_cols=243 Identities=24% Similarity=0.396 Sum_probs=197.3
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe----------------
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS---------------- 470 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------------- 470 (714)
.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 357999999999999986 69999999997654 356789999999999999999999864
Q ss_pred CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEc
Q 005102 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVS 550 (714)
Q Consensus 471 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 550 (714)
....++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred cceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEEC
Confidence 3457899999999999999975422 458999999999999999999999 899999999999999999999999
Q ss_pred ccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHH
Q 005102 551 DFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMI 630 (714)
Q Consensus 551 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ell 630 (714)
|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||+
T Consensus 165 Dfg~~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 215 (284)
T 2a19_B 165 DFGLVTSLKNDG-----------------------------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215 (284)
T ss_dssp CCTTCEESSCCS-----------------------------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH
T ss_pred cchhheeccccc-----------------------------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH
Confidence 999987653211 112234688999999999889999999999999999999
Q ss_pred hCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 631 TGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 631 tG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
+|..|+... ..+.... .. .......+ ..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 216 ~~~~~~~~~-------~~~~~~~-~~---------~~~~~~~~-----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 216 HVCDTAFET-------SKFFTDL-RD---------GIISDIFD-----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp SCCSSHHHH-------HHHHHHH-HT---------TCCCTTSC-----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred hcCCcchhH-------HHHHHHh-hc---------ccccccCC-----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999988321 1111111 11 11111111 25778999999999999999999999999887
Q ss_pred cc
Q 005102 711 VS 712 (714)
Q Consensus 711 ~~ 712 (714)
.+
T Consensus 274 ~~ 275 (284)
T 2a19_B 274 KS 275 (284)
T ss_dssp C-
T ss_pred hC
Confidence 54
No 160
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=9.8e-40 Score=350.15 Aligned_cols=191 Identities=28% Similarity=0.369 Sum_probs=168.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 118 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence 47999999999999986 58999999997653 33456799999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
.+++... ..+++..+.+|+.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.....
T Consensus 119 ~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 185 (360)
T 3eqc_A 119 DQVLKKA------GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185 (360)
T ss_dssp HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc----
Confidence 9999764 458999999999999999999998 6 8999999999999999999999999999765421
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 186 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 186 --------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp --------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred --------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11233578899999999999999999999999999999999999954
No 161
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.5e-40 Score=340.48 Aligned_cols=241 Identities=22% Similarity=0.325 Sum_probs=190.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEe----CCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS----VDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 481 (714)
..||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 47999999999999975 4789999998754 33445679999999999999999999999875 34579999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeeC-CCCCeEEcccchhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK--YVHGDLKPSNILLG-HNMEPHVSDFGLARLA 558 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGla~~~ 558 (714)
++|+|.+++... ..+++..+..|+.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||+++..
T Consensus 112 ~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 112 TSGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp CSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred CCCCHHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999754 458999999999999999999999 77 99999999999998 7899999999999753
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
... ......||+.|+|||.+. ..++.++||||||+++|||++|+.||..
T Consensus 183 ~~~------------------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 183 RAS------------------------------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CTT------------------------------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccc------------------------------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 211 111234688999999886 4699999999999999999999999953
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... ........ ..... ....+. . ....+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~----~~~~~~~~-~~~~~-~~~~~~----~-----~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 232 CQN----AAQIYRRV-TSGVK-PASFDK----V-----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CSS----HHHHHHHH-TTTCC-CGGGGG----C-----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCc----HHHHHHHH-hccCC-ccccCC----C-----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 322 11122111 11111 111111 0 1135889999999999999999999975
No 162
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=339.98 Aligned_cols=247 Identities=23% Similarity=0.336 Sum_probs=194.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
.+||+|+||.||+|.+. +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999975 58899999998776666678999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhhhhccCCCCC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
+++...... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++......
T Consensus 108 ~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---- 177 (295)
T 2clq_A 108 ALLRSKWGP---LKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---- 177 (295)
T ss_dssp HHHHHTTCC---CTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------
T ss_pred HHHHhhccC---CCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCC----
Confidence 999765322 346789999999999999999999 89999999999999987 8999999999987543210
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC--CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK--PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||........
T Consensus 178 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 233 (295)
T 2clq_A 178 ------------------------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 233 (295)
T ss_dssp ---------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH
T ss_pred ------------------------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH
Confidence 1112345788999999997643 88999999999999999999999954322211
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
......... ..+...... ...+.+++.+||+.||++|||++|+++
T Consensus 234 ---~~~~~~~~~-------~~~~~~~~~-----~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 234 ---AMFKVGMFK-------VHPEIPESM-----SAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ---HHHHHHHHC-------CCCCCCTTS-----CHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ---HHHhhcccc-------ccccccccC-----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111 111222111 236789999999999999999999875
No 163
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3e-40 Score=350.12 Aligned_cols=259 Identities=22% Similarity=0.294 Sum_probs=202.6
Q ss_pred cccccccCceEEEEEEECC------CcEEEEEEeCCCCc-hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLED------GHTLAVRRLGEGGS-QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.+.||+|+||.||+|.+.. ...||+|++..... ...+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 3589999999999999753 24799999986533 3456799999999999 89999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCC--------CCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcc
Q 005102 480 YIPNGSLATALHGKPGM--------VSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSD 551 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~--------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 551 (714)
|+++|+|.+++...... .....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCeEEECc
Confidence 99999999998643100 001357999999999999999999999 8999999999999999999999999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
||+++....... ........+|+.|+|||.+.+..++.++||||||+++|||+|
T Consensus 208 fg~~~~~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 261 (333)
T 2i1m_A 208 FGLARDIMNDSN--------------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261 (333)
T ss_dssp CGGGCCGGGCTT--------------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccc--------------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHc
Confidence 999986543211 111223345778999999988899999999999999999999
Q ss_pred -CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhh
Q 005102 632 -GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLI 710 (714)
Q Consensus 632 -G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~ 710 (714)
|+.||....... .+......... +..... ....+.+++.+||+.||++|||++|+++.|+++.
T Consensus 262 ~g~~p~~~~~~~~-----~~~~~~~~~~~------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 262 LGLNPYPGILVNS-----KFYKLVKDGYQ------MAQPAF-----APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp TSCCSSTTCCSSH-----HHHHHHHHTCC------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCcccchhH-----HHHHHHhcCCC------CCCCCC-----CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 999995432221 11122222211 111111 1236889999999999999999999999999875
Q ss_pred c
Q 005102 711 V 711 (714)
Q Consensus 711 ~ 711 (714)
.
T Consensus 326 ~ 326 (333)
T 2i1m_A 326 Q 326 (333)
T ss_dssp H
T ss_pred H
Confidence 4
No 164
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=344.24 Aligned_cols=257 Identities=20% Similarity=0.317 Sum_probs=192.5
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||+||+|++.. |+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence 479999999999999864 89999999876533 234678899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 89 l~~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 156 (311)
T 4agu_A 89 LHELDRYQ------RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--- 156 (311)
T ss_dssp HHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred HHHHHhhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---
Confidence 99988755 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.... ..
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~ 209 (311)
T 4agu_A 157 -------------------------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS--DV 209 (311)
T ss_dssp ----------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HH
T ss_pred -------------------------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HH
Confidence 11123356888999999976 568999999999999999999999994332 22
Q ss_pred hhHHHHHHHHhh-----------cCCcccccCCCCCCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEE-----------KKPLADVLDPYLAPDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+....+...... .........+........ ......+.+++.+||+.||++|||++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 210 DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 222211111110 000000000000000000 012335789999999999999999999975
No 165
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.6e-39 Score=336.20 Aligned_cols=250 Identities=22% Similarity=0.284 Sum_probs=197.0
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEec
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 357999999999999987 589999999875421 2357899999999999999999999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC----CeEEcccchhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM----EPHVSDFGLAR 556 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 556 (714)
+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++
T Consensus 90 ~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 90 VSGGELFDFLAEK------ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999754 458999999999999999999999 8999999999999998877 89999999987
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||
T Consensus 161 ~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 211 (283)
T 3bhy_A 161 KIEAGN-----------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211 (283)
T ss_dssp ECC-------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred eccCCC-----------------------------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCC
Confidence 543211 112234688999999999999999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HHhhh
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD--ALDRL 709 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~--~L~~i 709 (714)
.... . .................. .. .....+.+++.+||+.||++|||++|+++ .++.+
T Consensus 212 ~~~~--~---~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 212 LGET--K---QETLTNISAVNYDFDEEY----FS-----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp CCSS--H---HHHHHHHHTTCCCCCHHH----HT-----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred CCcc--h---HHHHHHhHhcccCCcchh----cc-----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 4321 1 111211111111100000 00 11235789999999999999999999987 44444
No 166
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=358.32 Aligned_cols=247 Identities=20% Similarity=0.236 Sum_probs=193.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||+||+|+.+ +|+.||||++.+... ...+.+.+|++++.+++||||+++++++.+.+..|+||||+++|
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg 146 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG 146 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCC
Confidence 57999999999999986 589999999975321 12235789999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++......
T Consensus 147 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~-- 216 (412)
T 2vd5_A 147 DLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-- 216 (412)
T ss_dssp BHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--
T ss_pred cHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCC--
Confidence 9999997542 358999999999999999999999 899999999999999999999999999997653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-------CCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-------VVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
........||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 217 -------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 217 -------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp -------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred -------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 11223456899999999997 3568999999999999999999999995
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCC---CCHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKR---PTMRHISD 704 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~R---Pt~~evl~ 704 (714)
... . .+........... ..-|..... ...++.+++.+||. +|++| |+++|+++
T Consensus 272 ~~~--~---~~~~~~i~~~~~~---~~~p~~~~~-----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 272 ADS--T---AETYGKIVHYKEH---LSLPLVDEG-----VPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CSS--H---HHHHHHHHTHHHH---CCCC----C-----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCC--H---HHHHHHHHhcccC---cCCCccccC-----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 321 1 1222222211100 000111111 12367899999999 99998 58888764
No 167
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.1e-39 Score=347.52 Aligned_cols=190 Identities=24% Similarity=0.278 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-----CCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-----HSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||+||+|++. +++.||||++... ....+.+..|++++++++ ||||+++++++...+..++||||+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 57999999999999985 5899999999753 233466788999999986 999999999999999999999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-------------------
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH------------------- 543 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~------------------- 543 (714)
+++|.+++..... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||+++
T Consensus 119 ~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 119 GPSLYEIITRNNY----NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 8999999976532 358999999999999999999999 89999999999999976
Q ss_pred ------CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchh
Q 005102 544 ------NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKW 617 (714)
Q Consensus 544 ------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~ 617 (714)
++.+||+|||+++.... ......||+.|+|||++.+..++.++
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 240 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSD-------------------------------YHGSIINTRQYRAPEVILNLGWDVSS 240 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTS-------------------------------CCCSCCSCGGGCCHHHHTTCCCCTTH
T ss_pred cccccCCCCEEEEeccCceecCC-------------------------------CCcCccCcccccCcHHHcCCCCCCcc
Confidence 78999999999975321 11234578899999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCcccc
Q 005102 618 DIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 618 DVwS~Gvvl~elltG~~p~~~ 638 (714)
|||||||++|||+||+.||..
T Consensus 241 DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 241 DMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSCCC
T ss_pred chHHHHHHHHHHHHCCCCCCC
Confidence 999999999999999999953
No 168
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-39 Score=343.47 Aligned_cols=247 Identities=22% Similarity=0.285 Sum_probs=194.6
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+|... +++.||||++... .......+.+|+.++.+++ ||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 367999999999999986 4899999998764 2334578999999999994 69999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhhhc
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLANI 560 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~ 560 (714)
|+|.+++..... ..+++.++..|+.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 114 ~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 114 GEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp EEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred CcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999999865432 458999999999999999999999 89999999999999998 78999999999986532
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 187 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 187 AC-----------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp ------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc-----------------------------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 1123457899999999999999999999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ............... ..... .....+.+++.+||+.||++|||++|+++
T Consensus 238 ~-----~~~~~~i~~~~~~~~----~~~~~-----~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 238 N-----QETYLNISQVNVDYS----EETFS-----SVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp H-----HHHHHHHHHTCCCCC----TTTTT-----TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c-----hHHHHHHHhcccccC----chhhc-----ccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1 111111111111110 10101 12235789999999999999999999875
No 169
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.6e-40 Score=346.44 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=185.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch--hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ--RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||+||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 118 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-ND 118 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CC
Confidence 47999999999999975 5899999999765322 24567899999999999999999999999999999999997 59
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee-----CCCCCeEEcccchhhhhhc
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL-----GHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl-----~~~~~~kl~DFGla~~~~~ 560 (714)
|.+++... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||+ ++++.+||+|||+++....
T Consensus 119 L~~~~~~~------~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 119 LKKYMDKN------PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp HHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred HHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 99999765 458999999999999999999999 899999999999999 4556699999999987642
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 190 ~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 190 PI----------------------------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp --------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc----------------------------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 21 1122334688899999998754 899999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcC--Cccc------ccC--CCCCCCCCcH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKK--PLAD------VLD--PYLAPDADKE-----EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~--~~~~------~~d--~~~~~~~~~~-----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ..+....+........ .... ... +..... ... ....++.+++.+||+.||++|||++|+++
T Consensus 242 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 242 S--EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGK-TLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp S--HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC-CHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C--HHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccc-cHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1 1111111111110000 0000 000 000000 000 02246789999999999999999999875
No 170
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.7e-40 Score=346.07 Aligned_cols=265 Identities=26% Similarity=0.341 Sum_probs=198.9
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe----CCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS----VDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+++. .+++.||||++........+.+.+|++++++++||||+++++++.. ....++||||+++
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~ 114 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR 114 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence 4799999999999997 4689999999977666667789999999999999999999999873 3467899999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++...... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 115 GTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp CBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 9999998752111 1458999999999999999999999 8999999999999999999999999998875431100
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC---CCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK---PSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
. .... ..........||+.|+|||.+.+.. ++.++||||||+++|||++|+.||....
T Consensus 190 ~--------------~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 250 (317)
T 2buj_A 190 G--------------SRQA-----LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250 (317)
T ss_dssp S--------------HHHH-----HHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHH
T ss_pred c--------------cccc-----ccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhh
Confidence 0 0000 0000011223588899999997654 6899999999999999999999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.......... ...... + .... ....+.+++.+||+.||++|||++++++.|+++...
T Consensus 251 ~~~~~~~~~~----~~~~~~-----~-~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 251 QKGDSVALAV----QNQLSI-----P-QSPR-----HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HTTSCHHHHH----HCC--C-----C-CCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred cccchhhHHh----hccCCC-----C-cccc-----CCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 1111111111 111000 0 0011 123688999999999999999999999999998654
No 171
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.7e-40 Score=340.15 Aligned_cols=246 Identities=25% Similarity=0.400 Sum_probs=192.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeC-CceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-DEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||++.+. |+.||||++.... ..+.+.+|++++++++||||+++++++... +..++||||+++|+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred eEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 57999999999999985 8899999997643 346799999999999999999999997654 4789999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++..... ..+++..+.+++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 104 ~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------ 170 (278)
T 1byg_A 104 DYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------ 170 (278)
T ss_dssp HHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred HHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccccc------
Confidence 99975421 237899999999999999999999 89999999999999999999999999998754311
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCCCcchh
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGSSEMDL 646 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~l 646 (714)
.....+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+.
T Consensus 171 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~ 223 (278)
T 1byg_A 171 -------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDV 223 (278)
T ss_dssp ------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGH
T ss_pred -------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 111234678999999988899999999999999999998 9999953322 111
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.. . ..... .+..... ....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 224 ~~---~-~~~~~------~~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 224 VP---R-VEKGY------KMDAPDG-----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HH---H-HTTTC------CCCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH---H-HhcCC------CCCCccc-----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 11 1 11111 1111111 123688999999999999999999999999998653
No 172
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=340.94 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=190.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-----chhHHHHHHHHHHHhccC---CCCccceEEEEEeCC-----ce
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-----SQRFKEFQTEVEAIGKIR---HSNIVTLRAYYWSVD-----EK 474 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~-----~~ 474 (714)
+.||+|+||+||+|++. +++.||||++.... ......+.+|++++++++ ||||+++++++.... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 47999999999999974 58999999986432 112246778888887775 999999999998765 47
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccch
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGL 554 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 554 (714)
++||||+. |+|.+++..... ..+++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 95 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 89999996 699999987643 348999999999999999999999 8999999999999999999999999999
Q ss_pred hhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCC
Q 005102 555 ARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 555 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~ 634 (714)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 167 a~~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~ 217 (308)
T 3g33_A 167 ARIYSYQM-----------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217 (308)
T ss_dssp TTTSTTCC-----------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSC
T ss_pred ccccCCCc-----------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCC
Confidence 97653211 1122346889999999999999999999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCC--ccccc---CCCCCCC-CCc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKP--LADVL---DPYLAPD-ADK-----EEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~---d~~~~~~-~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
||... ...+....+......... ..... ....... ... .+....+.+++.+||+.||++|||++|++
T Consensus 218 pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 295 (308)
T 3g33_A 218 LFCGN--SEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295 (308)
T ss_dssp SCCCS--SHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCC--CHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence 99432 222222211111111000 00000 0000000 000 01224678999999999999999999987
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 296 ~ 296 (308)
T 3g33_A 296 Q 296 (308)
T ss_dssp T
T ss_pred c
Confidence 5
No 173
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.4e-39 Score=336.82 Aligned_cols=239 Identities=21% Similarity=0.319 Sum_probs=194.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 99 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG 99 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCC
Confidence 57999999999999986 47899999986532 223467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 100 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 167 (284)
T 2vgo_A 100 ELYKELQKH------GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--- 167 (284)
T ss_dssp EHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc---
Confidence 999999754 458999999999999999999999 89999999999999999999999999998643211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 168 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---- 216 (284)
T 2vgo_A 168 ---------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS---- 216 (284)
T ss_dssp ---------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----
T ss_pred ---------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC----
Confidence 1123356889999999999899999999999999999999999994321
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............. ...... ...+.+++.+||+.||++|||++|+++
T Consensus 217 -~~~~~~~~~~~~~--------~~~~~~-----~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 217 -HTETHRRIVNVDL--------KFPPFL-----SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -HHHHHHHHHTTCC--------CCCTTS-----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -HhHHHHHHhcccc--------CCCCcC-----CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1111222222111 111111 235789999999999999999999975
No 174
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.8e-40 Score=358.66 Aligned_cols=245 Identities=20% Similarity=0.297 Sum_probs=184.2
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCC--------chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGG--------SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 478 (714)
.+.||+|+||.||+|.... ++.||||++.... ......+.+|+++|++++||||+++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 3579999999999999764 8999999987532 111235889999999999999999999975 45689999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC---CCeEEcccchh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVSDFGLA 555 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla 555 (714)
||+++|+|.+++... ..+++..+..|+.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||++
T Consensus 219 e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 219 ELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp ECCTTCBGGGGTSSS------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EcCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 999999999998755 458999999999999999999999 899999999999999654 45999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---CCCCchhhhHHHHHHHHHHHhC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---VKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DVwS~Gvvl~elltG 632 (714)
+..... .......||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 290 ~~~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg 340 (419)
T 3i6u_A 290 KILGET-----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340 (419)
T ss_dssp TSCC----------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHS
T ss_pred eecCCC-----------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHC
Confidence 865321 11123457899999999863 5688999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.||....... .+...+ ........ +... ......+.+++.+||+.||++|||++|+++
T Consensus 341 ~~pf~~~~~~~-~~~~~i---~~~~~~~~----~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 341 YPPFSEHRTQV-SLKDQI---TSGKYNFI----PEVW-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCSSCCCSSSC-CHHHHH---HTTCCCCC----HHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCcchH-HHHHHH---hcCCCCCC----chhh-----cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 99995432221 121111 11111000 0000 011236889999999999999999999876
No 175
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.2e-40 Score=343.17 Aligned_cols=245 Identities=20% Similarity=0.334 Sum_probs=192.4
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|.+.. ++.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 104 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence 479999999999999864 8999999998776666788999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 170 (302)
T 2j7t_A 105 AIMLELD-----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT------ 170 (302)
T ss_dssp HHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH------
T ss_pred HHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccc------
Confidence 9886532 458999999999999999999999 89999999999999999999999999998654221
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc-----CCCCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL-----KVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
........||+.|+|||.+ .+..++.++||||||+++|||++|+.||....
T Consensus 171 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-- 226 (302)
T 2j7t_A 171 ----------------------LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-- 226 (302)
T ss_dssp ----------------------HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC--
T ss_pred ----------------------ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC--
Confidence 0111233578899999998 46778999999999999999999999994322
Q ss_pred cchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 643 EMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 643 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.............. .... .......+.+++.+||+.||++|||++|+++
T Consensus 227 ---~~~~~~~~~~~~~~--~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 227 ---PMRVLLKIAKSDPP--TLLT--------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---HHHHHHHHHHSCCC--CCSS--------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---HHHHHHHHhccCCc--ccCC--------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11122222222111 0000 1112236889999999999999999999875
No 176
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-40 Score=351.84 Aligned_cols=247 Identities=23% Similarity=0.279 Sum_probs=194.3
Q ss_pred ccccccCceEEEEEEE----CCCcEEEEEEeCCCC----chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVL----EDGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 479 (714)
+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 139 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 139 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEEC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEee
Confidence 5799999999999998 368999999987532 12335677899999999 69999999999999999999999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 140 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 140 YINGGELFTHLSQR------ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCSCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred cCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 99999999999754 458999999999999999999999 899999999999999999999999999997543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 211 ~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 263 (355)
T 1vzo_A 211 ADE---------------------------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263 (355)
T ss_dssp GGG---------------------------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred cCC---------------------------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 211 111223357899999999986 347899999999999999999999995
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-----TMRHISDA 705 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 705 (714)
..... .....+.......... ..... ...+.+++.+||+.||++|| |++|+++.
T Consensus 264 ~~~~~-~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 264 VDGEK-NSQAEISRRILKSEPP--------YPQEM-----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CTTSC-CCHHHHHHHHHHCCCC--------CCTTS-----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cCCcc-chHHHHHHHHhccCCC--------CCccc-----CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 43222 2223333332222211 11111 23578999999999999999 88888753
No 177
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-39 Score=333.67 Aligned_cols=240 Identities=23% Similarity=0.315 Sum_probs=188.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence 47999999999999986 68999999986532 233467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 97 ELFDYICKH------GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp BHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred cHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 999999754 358999999999999999999999 899999999999999999999999999987643210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...
T Consensus 166 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~---- 214 (276)
T 2h6d_A 166 ---------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE---- 214 (276)
T ss_dssp --------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred ---------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC----
Confidence 1112346888999999987765 68999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
............... .... ....+.+++.+||+.||++|||++|+++
T Consensus 215 -~~~~~~~~~~~~~~~--------~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 215 -HVPTLFKKIRGGVFY--------IPEY-----LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -SHHHHHHHHHHCCCC--------CCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -cHHHHHHHhhcCccc--------Cchh-----cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 112222222221111 1111 1235789999999999999999999986
No 178
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3e-39 Score=341.58 Aligned_cols=257 Identities=22% Similarity=0.292 Sum_probs=197.9
Q ss_pred ccccccCceEEEEEEE------CCCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVL------EDGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|++ .++..||||++... ......++.+|+.++++++||||+++++++...+..++||||+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 115 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 115 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecC
Confidence 4799999999999984 24779999999754 3344567999999999999999999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhh
Q 005102 482 PNGSLATALHGKPGMV-SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARL 557 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~ 557 (714)
++|+|.+++....... ....+++.++..++.|++.||+|||+ .+|+||||||+|||++. +..+||+|||+++.
T Consensus 116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 9999999997653211 11358999999999999999999999 89999999999999984 45699999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~ 636 (714)
...... ........||+.|+|||.+.+..++.++||||||+++|||+| |+.||
T Consensus 193 ~~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 246 (327)
T 2yfx_A 193 IYRASY--------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246 (327)
T ss_dssp HHC--------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccccc--------------------------cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 543211 011122345788999999988899999999999999999998 99998
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.... .. ........... +..... ....+.+++.+||+.||++|||++++++.|+.+..
T Consensus 247 ~~~~--~~---~~~~~~~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 247 PSKS--NQ---EVLEFVTSGGR-------MDPPKN-----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp TTCC--HH---HHHHHHHTTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcC--HH---HHHHHHhcCCC-------CCCCCC-----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 4321 11 12221111111 111111 12368899999999999999999999999998754
No 179
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=346.12 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=190.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchh-----HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQR-----FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
+.||+|+||.||+|++. +|+.||||++....... .+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 95 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC
Confidence 57999999999999986 48999999997542211 2468899999999999999999999999999999999997
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 96 ~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 96 T-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp E-EHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred C-CHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 5 8998887653 458889999999999999999999 899999999999999999999999999998653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.......||+.|+|||.+.+. .++.++|||||||++|||++|..||...
T Consensus 167 ----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~-- 216 (346)
T 1ua2_A 167 ----------------------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD-- 216 (346)
T ss_dssp ----------------------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS--
T ss_pred ----------------------------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC--
Confidence 112234568899999999764 4899999999999999999999998432
Q ss_pred CcchhHHHHHHHHhh-cCCccc-ccC---------CCCCCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEE-KKPLAD-VLD---------PYLAPDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~-~~~~~~-~~d---------~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+. +...... ..+..+ ..+ ....+.... ......+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 217 SDLDQ---LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SHHHH---HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CHHHH---HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 11111 1122111 110000 000 000000000 111246889999999999999999999975
No 180
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=345.87 Aligned_cols=261 Identities=21% Similarity=0.263 Sum_probs=183.3
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEe--------CCceeEE
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWS--------VDEKLLI 477 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--------~~~~~lV 477 (714)
.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 358999999999999975 58999999997766666678999999999996 9999999999953 3347899
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeeCCCCCeEEcccchh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK--YVHGDLKPSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla 555 (714)
|||+. |+|.+++...... ..+++.++..|+.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||++
T Consensus 113 ~e~~~-g~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMESR---GPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EECCS-EEHHHHHHHHHTT---CSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEecC-CCHHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 99995 7999988642111 458999999999999999999999 77 999999999999999999999999999
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc---CCCCCCchhhhHHHHHHHHHHHhC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL---KVVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~s~~~DVwS~Gvvl~elltG 632 (714)
+............. ............||+.|+|||++ .+..++.++|||||||++|||+||
T Consensus 186 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g 249 (337)
T 3ll6_A 186 TTISHYPDYSWSAQ----------------RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR 249 (337)
T ss_dssp BCCSSCC-----------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred eeccccCccccccc----------------ccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhC
Confidence 86543211100000 00001112234578899999998 566789999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
+.||...... .. ...... ....... ...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 250 ~~p~~~~~~~-----~~----~~~~~~------~~~~~~~-----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 250 QHPFEDGAKL-----RI----VNGKYS------IPPHDTQ-----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp SCCC---------------------CC------CCTTCCS-----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcchhHH-----Hh----hcCccc------CCccccc-----chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999432111 00 011100 0000111 1247789999999999999999999999998864
No 181
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=347.35 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=188.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchh-HHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQR-FKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||+||+|+.. +++.||||++....... ...+.+|++++++++||||+++++++...+..++||||++ |+|
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 86 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 86 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCH
Confidence 47999999999999986 58999999997643221 1245679999999999999999999999999999999997 599
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---- 154 (324)
T 3mtl_A 87 KQYLDDCG-----NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---- 154 (324)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc----
Confidence 99887653 358999999999999999999999 899999999999999999999999999997543211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD 645 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~ 645 (714)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ...+
T Consensus 155 ------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~ 208 (324)
T 3mtl_A 155 ------------------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS--TVEE 208 (324)
T ss_dssp --------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHH
T ss_pred ------------------------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHH
Confidence 11223356889999999876 56899999999999999999999999432 2222
Q ss_pred hHHHHHHHHhhcCC--cccccC---------CCCCCCCC---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 646 LVNWMQLCIEEKKP--LADVLD---------PYLAPDAD---KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 646 l~~~~~~~~~~~~~--~~~~~d---------~~~~~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
....+......... ...... +....... .......+.+++.+||+.||++|||++|+++
T Consensus 209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 209 QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 22222222111100 000000 00000000 0011235789999999999999999999975
No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-39 Score=343.32 Aligned_cols=258 Identities=23% Similarity=0.349 Sum_probs=192.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
..||+|+||.||+|+... |+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 110 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence 479999999999999865 89999999865433 234568899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 111 l~~~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 178 (331)
T 4aaa_A 111 LDDLELFP------NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 178 (331)
T ss_dssp HHHHHHST------TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred HHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc---
Confidence 98887654 458999999999999999999999 899999999999999999999999999997653211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... .
T Consensus 179 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~ 232 (331)
T 4aaa_A 179 -------------------------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-D 232 (331)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred -------------------------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-H
Confidence 111233568899999999875 6899999999999999999999999433211 1
Q ss_pred hhHHHHH----------HHHhhcCCcccccCCCCCCCCCcH----HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQ----------LCIEEKKPLADVLDPYLAPDADKE----EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~----------~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.+...+. ..............+......... .....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1111110 011111111111111111111100 12346889999999999999999998875
No 183
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.9e-39 Score=343.14 Aligned_cols=256 Identities=25% Similarity=0.395 Sum_probs=198.0
Q ss_pred cccccccCceEEEEEEEC-CCcE--EEEEEeCCC-CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHT--LAVRRLGEG-GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|++. ++.. ||+|++... .....+.+.+|+++++++ +||||+++++++...+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 357999999999999975 4554 499988753 233446789999999999 89999999999999999999999999
Q ss_pred CCCHhhhhhCCCC----------CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 483 NGSLATALHGKPG----------MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 483 ~gsL~~~l~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
+|+|.+++..... ......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEccc
Confidence 9999999976530 0011368999999999999999999999 89999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT- 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt- 631 (714)
|+++..... .......+++.|+|||.+.+..++.++||||||+++|||+|
T Consensus 187 g~~~~~~~~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 237 (327)
T 1fvr_A 187 GLSRGQEVY-----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 237 (327)
T ss_dssp TCEESSCEE-----------------------------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred CcCcccccc-----------------------------ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcC
Confidence 998743211 11122335778999999988889999999999999999998
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
|+.||.... ..+..... .... ....... ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 238 g~~pf~~~~-----~~~~~~~~-~~~~------~~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 238 GGTPYCGMT-----CAELYEKL-PQGY------RLEKPLN-----CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp SCCTTTTCC-----HHHHHHHG-GGTC------CCCCCTT-----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCc-----HHHHHHHh-hcCC------CCCCCCC-----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999994321 11111111 1111 1111111 12368899999999999999999999999999865
Q ss_pred c
Q 005102 712 S 712 (714)
Q Consensus 712 ~ 712 (714)
.
T Consensus 301 ~ 301 (327)
T 1fvr_A 301 E 301 (327)
T ss_dssp S
T ss_pred h
Confidence 3
No 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4e-39 Score=359.35 Aligned_cols=244 Identities=24% Similarity=0.324 Sum_probs=194.6
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||+|+||+||+|+.. +++.||||++... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 358999999999999986 5899999998643 2234577899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC---CCCCeEEcccchhhhhhcc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG---HNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~~~~ 561 (714)
+|.+.+... ..+++..+..|+.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 107 ~L~~~~~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 107 ELFDEIIKR------KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp BHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 999988754 458999999999999999999999 8999999999999995 4567999999999765321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.......||+.|+|||++.+ .++.++||||+||++|||++|+.||...
T Consensus 178 -----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-- 225 (486)
T 3mwu_A 178 -----------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-- 225 (486)
T ss_dssp ---------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--
T ss_pred -----------------------------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--
Confidence 11223457999999999975 5999999999999999999999999432
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. .+............. .+ ........+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~---~~~~~~i~~~~~~~~---~~------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 226 NE---YDILKRVETGKYAFD---LP------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp SH---HHHHHHHHHTCCCSC---SG------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CH---HHHHHHHHhCCCCCC---Cc------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11 222222222221110 00 00112236789999999999999999999986
No 185
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.7e-39 Score=345.99 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=194.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--------hhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--------QRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 478 (714)
+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 68999999999999986 699999999876431 1135688999999999 7999999999999999999999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++...
T Consensus 180 e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK------VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp CCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 999999999999754 458999999999999999999999 89999999999999999999999999998765
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC------CCCCchhhhHHHHHHHHHHHhC
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV------VKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~~DVwS~Gvvl~elltG 632 (714)
.... ......||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 251 ~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g 301 (365)
T 2y7j_A 251 EPGE-----------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301 (365)
T ss_dssp CTTC-----------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHS
T ss_pred CCCc-----------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHC
Confidence 3211 1223457899999999853 3578999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.||.... . ................ +.. . .....+.+++.+||+.||++|||++|+++
T Consensus 302 ~~pf~~~~--~---~~~~~~i~~~~~~~~~---~~~-~-----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 302 SPPFWHRR--Q---ILMLRMIMEGQYQFSS---PEW-D-----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SCSSCCSS--H---HHHHHHHHHTCCCCCH---HHH-S-----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCC--H---HHHHHHHHhCCCCCCC---ccc-c-----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 99994321 1 1112222222111000 000 0 11235889999999999999999999976
No 186
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-39 Score=351.58 Aligned_cols=212 Identities=25% Similarity=0.356 Sum_probs=157.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccC-CCCccceEEEEEeCC--ceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVD--EKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~lV~e~~~ 482 (714)
+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++...+ ..|+||||++
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~ 94 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence 47999999999999975 5899999999654 3344567889999999997 999999999998654 6899999997
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+|+......
T Consensus 95 -~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 95 -TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp -EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred -cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 6999988643 48899999999999999999999 899999999999999999999999999998654321
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.......... .. . .. .............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~~~~~~~-~~-~----~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 164 RVTNNIPLSI-NE-N----TE-NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CCCCCGGGCC-C---------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccc-cc-c----cc-ccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 1000000000 00 0 00 00000122344578999999999976 6789999999999999999999999953
No 187
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.6e-39 Score=374.56 Aligned_cols=236 Identities=21% Similarity=0.272 Sum_probs=193.8
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC---CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG---GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
++||+|+||+||+|+++. ++.||||++++. .....+.+..|..++..+ +||+|+++++++.+.+..|+||||+++
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~g 426 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 426 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCS
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCC
Confidence 579999999999999864 889999999753 223346788999999988 799999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
|+|.+++... ..+++..++.|+.||+.||+|||+ ++||||||||+|||++.++++||+|||+|+.....
T Consensus 427 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-- 495 (674)
T 3pfq_A 427 GDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-- 495 (674)
T ss_dssp CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT--
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccC--
Confidence 9999999765 458999999999999999999999 89999999999999999999999999999753211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 496 --------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~---- 545 (674)
T 3pfq_A 496 --------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE---- 545 (674)
T ss_dssp --------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS----
T ss_pred --------------------------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC----
Confidence 11223456899999999999999999999999999999999999999432
Q ss_pred chhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCH
Q 005102 644 MDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTM 699 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 699 (714)
+..+..+........+ +.. ...++.+|+.+||+.||++||++
T Consensus 546 -~~~~~~~~i~~~~~~~--------p~~-----~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 546 -DEDELFQSIMEHNVAY--------PKS-----MSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -SHHHHHHHHHSSCCCC--------CTT-----SCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -CHHHHHHHHHhCCCCC--------Ccc-----CCHHHHHHHHHHccCCHHHCCCC
Confidence 1222333333322211 111 12357899999999999999997
No 188
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.5e-39 Score=361.02 Aligned_cols=244 Identities=24% Similarity=0.344 Sum_probs=196.4
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 357999999999999986 68999999986542 33457899999999999999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhc
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~ 560 (714)
|+|.+++... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++....
T Consensus 111 ~~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 111 GELFDEIISR------KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CBHHHHHHTC------SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999765 458999999999999999999999 899999999999999 5678999999999986542
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.. ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...
T Consensus 182 ~~-----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~- 230 (484)
T 3nyv_A 182 SK-----------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA- 230 (484)
T ss_dssp CC-----------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred cc-----------------------------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-
Confidence 11 1112347899999999875 6999999999999999999999999432
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... +.+........... .+ ........+.+++.+||+.||++|||++|+++
T Consensus 231 -~~~---~~~~~i~~~~~~~~---~~------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 231 -NEY---DILKKVEKGKYTFE---LP------QWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -SHH---HHHHHHHHCCCCCC---SG------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CHH---HHHHHHHcCCCCCC---Cc------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 222 22222222221110 00 00112236789999999999999999999975
No 189
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.8e-39 Score=359.38 Aligned_cols=244 Identities=21% Similarity=0.301 Sum_probs=190.9
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||+|+||+||+|+.+ ++..||||++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 357999999999999986 58899999997642 233467899999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhhhcc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~ 561 (714)
+|.+.+... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 122 ~L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 122 ELFDEIIHR------MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp BHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999988654 458999999999999999999999 89999999999999976 455999999999765321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
.......||+.|+|||++. ..++.++||||+||++|||++|+.||....
T Consensus 193 -----------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~- 241 (494)
T 3lij_A 193 -----------------------------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT- 241 (494)
T ss_dssp -----------------------------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred -----------------------------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-
Confidence 1122345799999999986 569999999999999999999999994321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .+............. .+... .....+.+++.+||+.||++|||++|+++
T Consensus 242 -~---~~~~~~i~~~~~~~~---~~~~~------~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 242 -D---QEILRKVEKGKYTFD---SPEWK------NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -H---HHHHHHHHHTCCCCC---SGGGT------TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -H---HHHHHHHHhCCCCCC---chhcc------cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1 222222222221111 11110 11235789999999999999999999874
No 190
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.7e-39 Score=334.19 Aligned_cols=242 Identities=23% Similarity=0.373 Sum_probs=197.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 107 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA 107 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence 47999999999999975 58999999997653 34457899999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 108 ~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 173 (303)
T 3a7i_A 108 LDLLEP-------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 173 (303)
T ss_dssp HHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB----
T ss_pred HHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccc----
Confidence 999864 358999999999999999999999 899999999999999999999999999987653211
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchh
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDL 646 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l 646 (714)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... .
T Consensus 174 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~--- 224 (303)
T 3a7i_A 174 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--P--- 224 (303)
T ss_dssp ------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--H---
T ss_pred ------------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--H---
Confidence 11223457889999999999999999999999999999999999994321 1
Q ss_pred HHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 005102 647 VNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDA 705 (714)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 705 (714)
............ +...... ...+.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~-------~~~~~~~-----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 225 MKVLFLIPKNNP-------PTLEGNY-----SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHHHHHHSCC-------CCCCSSC-----CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHHHhhcCCC-------CCCcccc-----CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111111111111 1111111 2358899999999999999999999763
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.3e-40 Score=357.16 Aligned_cols=238 Identities=14% Similarity=0.136 Sum_probs=183.0
Q ss_pred ccccccCceEEEEEEE-CCCcEEEEEEeCCC---CchhHHHHHHHH---HHHhccCCCCccceE-------EEEEeCCc-
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHTLAVRRLGEG---GSQRFKEFQTEV---EAIGKIRHSNIVTLR-------AYYWSVDE- 473 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~~~~~~- 473 (714)
+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|+ +++++++|||||+++ +++...+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 158 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence 5799999999999996 45999999999743 334557899999 556666899999998 77765543
Q ss_pred ----------------eeEEEeccCCCCHhhhhhCCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCC
Q 005102 474 ----------------KLLIYDYIPNGSLATALHGKPGMV-SFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKP 536 (714)
Q Consensus 474 ----------------~~lV~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp 536 (714)
.++||||+ +|+|.+++....... ....+++..+.+|+.||+.||+|||+ .+|+||||||
T Consensus 159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDikp 234 (377)
T 3byv_A 159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP 234 (377)
T ss_dssp SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence 78999999 689999997532100 01235568889999999999999999 8999999999
Q ss_pred CCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-----
Q 005102 537 SNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV----- 611 (714)
Q Consensus 537 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----- 611 (714)
+|||++.++.+||+|||+|+.... ......| +.|+|||++.+.
T Consensus 235 ~NIll~~~~~~kL~DFG~a~~~~~-------------------------------~~~~~~g-~~y~aPE~~~~~~~~~~ 282 (377)
T 3byv_A 235 VDIVLDQRGGVFLTGFEHLVRDGA-------------------------------RVVSSVS-RGFEPPELEARRATISY 282 (377)
T ss_dssp GGEEECTTCCEEECCGGGCEETTC-------------------------------EEECCCC-TTCCCHHHHHHHTSTHH
T ss_pred HHEEEcCCCCEEEEechhheecCC-------------------------------cccCCCC-cCccChhhhcccccccc
Confidence 999999999999999999974321 1122345 789999999877
Q ss_pred ------CCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHH
Q 005102 612 ------KPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIA 685 (714)
Q Consensus 612 ------~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li 685 (714)
.++.++|||||||++|||+||+.||........ ...+... . ... ...+.+++
T Consensus 283 ~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~---------------~~~~~~~-~-~~~-----~~~~~~li 340 (377)
T 3byv_A 283 HRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG---------------SEWIFRS-C-KNI-----PQPVRALL 340 (377)
T ss_dssp HHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC---------------SGGGGSS-C-CCC-----CHHHHHHH
T ss_pred cccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc---------------hhhhhhh-c-cCC-----CHHHHHHH
Confidence 899999999999999999999999943221110 1111111 0 111 23688999
Q ss_pred hHccCCCCCCCCCHHHHHH
Q 005102 686 MACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 686 ~~Cl~~dP~~RPt~~evl~ 704 (714)
.+||+.||++|||+.|+++
T Consensus 341 ~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 341 EGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHTCSSGGGCCCHHHHHT
T ss_pred HHHcCCCchhCCCHHHHhh
Confidence 9999999999999999985
No 192
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.6e-39 Score=354.53 Aligned_cols=259 Identities=15% Similarity=0.202 Sum_probs=199.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCC-CCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH-SNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|++. +++.||||++...... .++.+|+++++.++| ++|..+..++...+..++||||+ +++|
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 47999999999999974 5899999988754332 357899999999987 55666666777788889999999 9999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---CCCCCeEEcccchhhhhhccCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL---GHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~ 563 (714)
.+++.... ..+++.+++.|+.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 90 ~~ll~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 90 EDLFNFCS-----RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 99997543 459999999999999999999999 899999999999999 6889999999999987653221
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
..... ........||..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 162 ~~~~~---------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~ 220 (483)
T 3sv0_A 162 HQHIP---------------------YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 220 (483)
T ss_dssp CCBCC---------------------CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred ccccc---------------------cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh
Confidence 10000 112234568999999999999999999999999999999999999995443222
Q ss_pred chhHHHHHHHHhhc--CCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 644 MDLVNWMQLCIEEK--KPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 644 ~~l~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
....+....... .....+.. . ...++.+++..||+.||++||++++|++.|+++..
T Consensus 221 --~~~~~~~i~~~~~~~~~~~l~~-----~-----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 221 --KKQKYEKISEKKVATSIEALCR-----G-----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp --HHHHHHHHHHHHHHSCHHHHHT-----T-----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhhccccccHHHHhc-----C-----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 111111111111 11111111 1 12368899999999999999999999999999864
No 193
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=354.53 Aligned_cols=208 Identities=24% Similarity=0.385 Sum_probs=156.6
Q ss_pred HHHHHHhccccccccCceEEEEEEEC---CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe--CCce
Q 005102 400 LDELLKASAFVLGKSGIGIVYKVVLE---DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEK 474 (714)
Q Consensus 400 ~~~l~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 474 (714)
+++.+...+++||+|+||+||+|+++ +++.||||++...... ..+.+|+++|++++||||+++++++.. ....
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 44444444668999999999999976 4789999999765433 568899999999999999999999965 5678
Q ss_pred eEEEeccCCCCHhhhhhCCCC---CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----CCCCCe
Q 005102 475 LLIYDYIPNGSLATALHGKPG---MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL----GHNMEP 547 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~---~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~ 547 (714)
++||||+. |+|.+++..... ......+++..++.|+.||+.||+|||+ .+|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999996 588887753210 0011348999999999999999999999 899999999999999 778999
Q ss_pred EEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHH
Q 005102 548 HVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVIL 626 (714)
Q Consensus 548 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl 626 (714)
||+|||+|+........ ........||+.|+|||++.+. .++.++|||||||++
T Consensus 172 kl~Dfg~a~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il 226 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKP-------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF 226 (405)
T ss_dssp EECCTTCCC-----------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHH
T ss_pred EEEECCCceecCCCCcc-------------------------cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHH
Confidence 99999999865422100 1122345679999999999874 489999999999999
Q ss_pred HHHHhCCCcccc
Q 005102 627 LEMITGRTAVVQ 638 (714)
Q Consensus 627 ~elltG~~p~~~ 638 (714)
|||++|+.||..
T Consensus 227 ~ell~g~~pf~~ 238 (405)
T 3rgf_A 227 AELLTSEPIFHC 238 (405)
T ss_dssp HHHHHSSCTTCC
T ss_pred HHHHhCCCCCCC
Confidence 999999999953
No 194
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.2e-39 Score=334.54 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=192.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+. |+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 87 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 87 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CC
Confidence 47999999999999986 589999999875432 223678899999999999999999999999999999999997 69
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSP 565 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 565 (714)
|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--- 157 (299)
T 2r3i_A 88 LKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--- 157 (299)
T ss_dssp HHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS---
T ss_pred HHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc---
Confidence 9999876532 358899999999999999999999 899999999999999999999999999998754211
Q ss_pred CccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 566 TLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
.......+|+.|+|||.+.+.. ++.++||||||+++|||+||+.||.... ..
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~ 210 (299)
T 2r3i_A 158 -------------------------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EI 210 (299)
T ss_dssp -------------------------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HH
T ss_pred -------------------------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc--HH
Confidence 1112234688899999998765 7999999999999999999999995322 11
Q ss_pred hhHHHHHHHHhhcCCcccc----------cCCCCCCCC--Cc----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 645 DLVNWMQLCIEEKKPLADV----------LDPYLAPDA--DK----EEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~----------~d~~~~~~~--~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+. ............+. ..+...... .. ......+.+++.+||+.||++|||++|+++
T Consensus 211 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 211 DQ---LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HH---HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HH---HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11 11111111000000 001110000 00 011246789999999999999999999986
No 195
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.2e-39 Score=340.83 Aligned_cols=252 Identities=19% Similarity=0.247 Sum_probs=192.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEe--CCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWS--VDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|+.. +++.||||++.... .+.+.+|++++++++ ||||+++++++.. ....++||||++++
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 47999999999999874 58999999997543 367899999999997 9999999999987 56789999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC-CeEEcccchhhhhhccCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM-EPHVSDFGLARLANIAGG 563 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 563 (714)
+|.+++. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++......
T Consensus 119 ~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~- 185 (330)
T 3nsz_A 119 DFKQLYQ---------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ- 185 (330)
T ss_dssp CHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-
T ss_pred hHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-
Confidence 9999883 47889999999999999999999 8999999999999999776 89999999997653211
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSS 642 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~ 642 (714)
......||..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 186 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~ 237 (330)
T 3nsz_A 186 ----------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237 (330)
T ss_dssp ----------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred ----------------------------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence 1223456888999999977 66899999999999999999999999544333
Q ss_pred cchhHHHHHHHH--------hh-cCCc----ccccCCCC-------CCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHH
Q 005102 643 EMDLVNWMQLCI--------EE-KKPL----ADVLDPYL-------APDADKEEEIIAVLKIAMACVHSSPEKRPTMRHI 702 (714)
Q Consensus 643 ~~~l~~~~~~~~--------~~-~~~~----~~~~d~~~-------~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ev 702 (714)
...+........ .. .... .+...... ............+.+++.+||+.||++|||++|+
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 222222111100 00 0000 00000000 0000011123468899999999999999999999
Q ss_pred HH
Q 005102 703 SD 704 (714)
Q Consensus 703 l~ 704 (714)
++
T Consensus 318 l~ 319 (330)
T 3nsz_A 318 ME 319 (330)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 196
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=346.99 Aligned_cols=250 Identities=24% Similarity=0.344 Sum_probs=185.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 479 (714)
+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++...+ ..|+|||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e 110 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence 47999999999999985 5899999999654 2333567899999999999999999999998653 4599999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+ +++|.+++... .+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 111 ~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 111 FM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred cC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 99 78999998643 48899999999999999999999 899999999999999999999999999997542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
. ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 180 ~-------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 180 S-------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp S-------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred c-------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 1 1123456899999999876 6799999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccC--------------CCCC-CCCC--cHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLD--------------PYLA-PDAD--KEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d--------------~~~~-~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
. ...+....+.... +.+..+... +... .... .......+.+++.+||..||++|||++|
T Consensus 229 ~--~~~~~l~~i~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e 304 (367)
T 1cm8_A 229 S--DHLDQLKEIMKVT--GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 304 (367)
T ss_dssp S--SHHHHHHHHHHHH--CCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred C--CHHHHHHHHHHhc--CCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHH
Confidence 2 1111111111110 000000000 0000 0000 0011236789999999999999999999
Q ss_pred HHH
Q 005102 702 ISD 704 (714)
Q Consensus 702 vl~ 704 (714)
+++
T Consensus 305 ~l~ 307 (367)
T 1cm8_A 305 ALA 307 (367)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-39 Score=343.52 Aligned_cols=261 Identities=19% Similarity=0.278 Sum_probs=193.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhccCCCCccceEEEEEeC--------CceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV--------DEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~~~lV 477 (714)
+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++... +..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 102 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence 47999999999999984 689999999865432 2245788999999999999999999999873 467999
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+++ +|.+.+.... ..+++.++..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 103 FDFCEH-DLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EECCSE-EHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeccCC-CHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 999975 8888776553 458999999999999999999999 8999999999999999999999999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
........ ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||
T Consensus 174 ~~~~~~~~------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 229 (351)
T 3mi9_A 174 FSLAKNSQ------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229 (351)
T ss_dssp CCCCSSSS------------------------CCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccc------------------------ccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54221100 112234567899999999876 45799999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcC-Cc-ccc-----cCC---CCCCCCCcHHH------HHHHHHHHhHccCCCCCCCCCHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKK-PL-ADV-----LDP---YLAPDADKEEE------IIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~-~~-~~~-----~d~---~~~~~~~~~~~------~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
... ...+....+........ .. ... .+. ........... ...+.+++.+||+.||++|||++
T Consensus 230 ~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 307 (351)
T 3mi9_A 230 QGN--TEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 307 (351)
T ss_dssp CCS--SHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCC--ChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHH
Confidence 532 22222222222111110 00 000 000 00000011111 23578999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
|+++
T Consensus 308 e~l~ 311 (351)
T 3mi9_A 308 DALN 311 (351)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9875
No 198
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-39 Score=356.96 Aligned_cols=213 Identities=18% Similarity=0.305 Sum_probs=150.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~ 480 (714)
+.||+|+||+||+|++. +++.||||++... .....+.+.+|+++|++++||||+++++++... +..|+||||
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 138 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI 138 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECC
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEec
Confidence 57999999999999976 5899999999764 333456799999999999999999999999543 568999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+ +|+|.+++... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+....
T Consensus 139 ~-~~~L~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 139 A-DSDFKKLFRTP------VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp C-SEEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred c-ccchhhhcccC------CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 8 57999999765 458999999999999999999999 8999999999999999999999999999987653
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc-CCCCCCchhhhHHHHHHHHHHHhC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~~~DVwS~Gvvl~elltG 632 (714)
........... +........................||+.|+|||++ .+..++.++|||||||++|||+||
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPIS-PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC----------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccC-ccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 22110000000 000000000000000011233456789999999976 456799999999999999999993
No 199
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.2e-40 Score=339.32 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=190.6
Q ss_pred ccccccCceEEEEEEEC--CCc--EEEEEEeCCC---CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE--DGH--TLAVRRLGEG---GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~--~g~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|++. +++ .||||++... .....+.+.+|++++++++||||+++++++...+ .++||||+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~ 102 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA 102 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence 47999999999999863 233 6899998764 2344578999999999999999999999997654 88999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
++|+|.+++.... ..+++..+.+++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 103 PLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp TTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred cCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 9999999997542 458999999999999999999999 89999999999999999999999999999765322
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~ 640 (714)
... ........+|..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 175 ~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 229 (291)
T 1u46_A 175 DDH-------------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229 (291)
T ss_dssp CCE-------------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccc-------------------------hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC
Confidence 110 111223446778999999988889999999999999999999 999994321
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
..+.+......... ..... .....+.+++.+||+.||++|||++++++.|+++...
T Consensus 230 -----~~~~~~~~~~~~~~------~~~~~-----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 230 -----GSQILHKIDKEGER------LPRPE-----DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -----HHHHHHHHHTSCCC------CCCCT-----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -----HHHHHHHHHccCCC------CCCCc-----CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 12222222222111 00111 1223688999999999999999999999999988654
No 200
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=336.93 Aligned_cols=243 Identities=21% Similarity=0.360 Sum_probs=191.9
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+.||+|+||.||+|.+.. |+.||||++..... .+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTSC--CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchHH--HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 579999999999999864 89999999976532 367899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCc
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTL 567 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 567 (714)
+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------ 178 (314)
T 3com_A 113 DIIRLRN-----KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT------ 178 (314)
T ss_dssp HHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT------
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh------
Confidence 9986432 458999999999999999999999 89999999999999999999999999998754321
Q ss_pred cCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhH
Q 005102 568 QSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLV 647 (714)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~ 647 (714)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .
T Consensus 179 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~ 231 (314)
T 3com_A 179 ----------------------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----M 231 (314)
T ss_dssp ----------------------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----H
T ss_pred ----------------------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----H
Confidence 0112234578899999999998999999999999999999999999953221 1
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 648 NWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 648 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
........... .....+ ......+.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~--~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 232 RAIFMIPTNPP--PTFRKP--------ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHHSCC--CCCSSG--------GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHhcCCC--cccCCc--------ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11111111111 000000 111236889999999999999999999975
No 201
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.6e-39 Score=335.38 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=193.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEe--CCceeEEEeccCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS--VDEKLLIYDYIPN 483 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~~~ 483 (714)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++||||+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 91 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence 47999999999999986 58999999997643 3345679999999999999999999998854 5678999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----ceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKK-----YVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
|+|.+++...... ...+++..+.+++.|++.||+|||+ .+ |+||||||+||++++++.+||+|||+++..
T Consensus 92 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 92 GDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCHHHHHHhhccc--CCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 9999998753211 1348999999999999999999999 77 999999999999999999999999999865
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.... .......||+.|+|||.+.+..++.++||||||+++|||+||+.||..
T Consensus 167 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 218 (279)
T 2w5a_A 167 NHDT----------------------------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218 (279)
T ss_dssp ---C----------------------------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccc----------------------------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 3210 000112357889999999988999999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHh
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALD 707 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 707 (714)
.. . ............ +.+... ....+.+++.+||+.||++|||++|+++.+.
T Consensus 219 ~~--~---~~~~~~i~~~~~-------~~~~~~-----~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 219 FS--Q---KELAGKIREGKF-------RRIPYR-----YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp SS--H---HHHHHHHHHTCC-------CCCCTT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cC--H---HHHHHHHhhccc-------ccCCcc-----cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 31 1 112222222111 111111 1236889999999999999999999987654
No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.5e-39 Score=351.31 Aligned_cols=190 Identities=21% Similarity=0.307 Sum_probs=164.3
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhcc------CCCCccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKI------RHSNIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|.... ++.||||++.... ...+.+.+|+++++.+ +|+||+++++++...+..++||||+
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 589999999999998764 8999999997643 3345678888888877 5779999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC--eEEcccchhhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME--PHVSDFGLARLAN 559 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~ 559 (714)
. ++|.+++..... ..+++..+.+|+.||+.||+|||+ .+|+||||||+|||++.++. +||+|||+++...
T Consensus 182 ~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 182 S-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp C-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred C-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 6 699999876532 358999999999999999999999 89999999999999999887 9999999987532
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 254 ~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 254 Q-------------------------------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp C-------------------------------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred C-------------------------------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 1 11234578899999999999999999999999999999999999943
No 203
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.7e-39 Score=358.20 Aligned_cols=243 Identities=22% Similarity=0.272 Sum_probs=191.5
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc-------------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCce
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS-------------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK 474 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 474 (714)
+.||+|+||+||+|+.+. ++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 121 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 479999999999999864 78999999875421 2346789999999999999999999999999999
Q ss_pred eEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC---CeEEcc
Q 005102 475 LLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM---EPHVSD 551 (714)
Q Consensus 475 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D 551 (714)
++||||+++|+|.+++... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++ .+||+|
T Consensus 122 ~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 122 YLVTEFYEGGELFEQIINR------HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EEEEECCTTCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 9999999999999998754 458999999999999999999999 8999999999999998775 699999
Q ss_pred cchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh
Q 005102 552 FGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 552 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt 631 (714)
||+++..... .......||+.|+|||++. ..++.++||||+||++|||++
T Consensus 193 fg~a~~~~~~-----------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~ 242 (504)
T 3q5i_A 193 FGLSSFFSKD-----------------------------YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLC 242 (504)
T ss_dssp CTTCEECCTT-----------------------------SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHH
T ss_pred CCCCEEcCCC-----------------------------CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHh
Confidence 9999865321 1122345789999999987 468999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|+.||... .. .+.+.............. .......+.+++.+||+.||.+|||++|+++
T Consensus 243 g~~pf~~~--~~---~~~~~~i~~~~~~~~~~~---------~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 243 GYPPFGGQ--ND---QDIIKKVEKGKYYFDFND---------WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp SSCSSCCS--SH---HHHHHHHHHCCCCCCHHH---------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCCCC--CH---HHHHHHHHcCCCCCCccc---------cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999432 11 222222222211100000 0011236889999999999999999999875
No 204
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.4e-39 Score=333.34 Aligned_cols=240 Identities=22% Similarity=0.292 Sum_probs=190.4
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPN 483 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 483 (714)
.+.||+|+||.||+|... +++.||||++... ......++.+|+..+.++ +||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 357999999999999986 6899999998764 333456788999999999 999999999999999999999999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-------------------C
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-------------------N 544 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-------------------~ 544 (714)
|+|.+++...... ...+++..+..|+.||+.||+|||+ ++|+||||||+||+++. .
T Consensus 96 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 96 GSLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------------C
T ss_pred CcHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 9999999753210 0348999999999999999999999 89999999999999984 4
Q ss_pred CCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHH
Q 005102 545 MEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYG 623 (714)
Q Consensus 545 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~G 623 (714)
..+||+|||.++..... ....||+.|+|||.+.+. .++.++||||||
T Consensus 171 ~~~kl~Dfg~~~~~~~~--------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG 218 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSP--------------------------------QVEEGDSRFLANEVLQENYTHLPKADIFALA 218 (289)
T ss_dssp CCEEECCCTTCEETTCS--------------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHH
T ss_pred eEEEEcccccccccCCc--------------------------------cccCCCccccChhHhcCCCCCCchhhHHHHH
Confidence 47999999998754321 122368899999999766 567899999999
Q ss_pred HHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 624 VILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 624 vvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
|++|||++|..|+... . . ........ . +...... ...+.+++.+||+.||++|||++|++
T Consensus 219 ~il~~l~~~~~~~~~~----~-~---~~~~~~~~--~-----~~~~~~~-----~~~~~~li~~~l~~dp~~Rps~~~ll 278 (289)
T 1x8b_A 219 LTVVCAAGAEPLPRNG----D-Q---WHEIRQGR--L-----PRIPQVL-----SQEFTELLKVMIHPDPERRPSAMALV 278 (289)
T ss_dssp HHHHHHTTCCCCCSSS----H-H---HHHHHTTC--C-----CCCSSCC-----CHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHhcCCCCCcch----h-H---HHHHHcCC--C-----CCCCccc-----CHHHHHHHHHHhCCCcccCCCHHHHh
Confidence 9999999998876321 1 1 11111111 1 1111111 23688999999999999999999987
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 279 ~ 279 (289)
T 1x8b_A 279 K 279 (289)
T ss_dssp T
T ss_pred h
Confidence 5
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.8e-39 Score=344.40 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=185.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 479 (714)
+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e 110 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence 47999999999999975 5899999999754 2334567889999999999999999999997654 6799999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|++ |+|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 111 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 111 LMD-ANLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp CCS-EEHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred cCC-CCHHHHHh--------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 997 58888885 238899999999999999999999 899999999999999999999999999997543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 179 ~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 179 TS-----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ----------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc-----------------------------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 21 0112345788999999999999999999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhc-CCccc--------------------------ccCCCCCCCCC--cHHHHHHHHHHHhHccC
Q 005102 640 GSSEMDLVNWMQLCIEEK-KPLAD--------------------------VLDPYLAPDAD--KEEEIIAVLKIAMACVH 690 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~-~~~~~--------------------------~~d~~~~~~~~--~~~~~~~l~~li~~Cl~ 690 (714)
. .. ..+....... .+..+ .......+... .......+.+++.+||+
T Consensus 230 ~--~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 304 (371)
T 2xrw_A 230 D--HI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 304 (371)
T ss_dssp S--HH---HHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC
T ss_pred C--HH---HHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCc
Confidence 1 11 1111111100 00000 00000000000 11235578999999999
Q ss_pred CCCCCCCCHHHHHH
Q 005102 691 SSPEKRPTMRHISD 704 (714)
Q Consensus 691 ~dP~~RPt~~evl~ 704 (714)
.||++|||++|+++
T Consensus 305 ~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 305 IDASKRISVDEALQ 318 (371)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred CChhhCCCHHHHhC
Confidence 99999999999976
No 206
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=9.1e-39 Score=350.80 Aligned_cols=212 Identities=20% Similarity=0.323 Sum_probs=161.3
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~ 480 (714)
+.||+|+||.||+|++.. ++.||||++... .....+.+.+|+++|++++||||+++++++... +..|+||||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 111 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI 111 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence 579999999999999764 889999999764 333456899999999999999999999999776 568999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+. |+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+....
T Consensus 112 ~~-~~L~~~~~~~------~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 112 AD-SDLKKLFKTP------IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp CS-EEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred CC-cCHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 96 5999999765 458999999999999999999999 8999999999999999999999999999987643
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc-CCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL-KVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
............ . ..................||+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus 182 ~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEE--N----EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccc--c----ccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 221100000000 0 00000000011223556789999999986 5566999999999999999999865544
No 207
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.9e-39 Score=340.28 Aligned_cols=246 Identities=23% Similarity=0.324 Sum_probs=190.1
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHH-HhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEA-IGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|+.. +|+.||||++.... .....++..|+.+ ++.++||||+++++++...+..++||||+++ +
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 135 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 135 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-E
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-c
Confidence 47999999999999974 68999999997653 3334556667666 7788999999999999999999999999975 9
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++...... ...+++..+..|+.||+.||+|||+ + +|+||||||+|||++.++.+||+|||+++.....
T Consensus 136 L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--- 207 (340)
T 3an0_A 136 LDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--- 207 (340)
T ss_dssp HHHHHHHHHHT--SCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH---
T ss_pred HHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc---
Confidence 98887631100 1468999999999999999999998 6 9999999999999999999999999999865321
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC----CCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK----VVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.......||+.|+|||++. ...++.++|||||||++|||+||+.||....
T Consensus 208 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~ 261 (340)
T 3an0_A 208 --------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261 (340)
T ss_dssp --------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred --------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc
Confidence 0111234788999999964 3468999999999999999999999995432
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... ..+........ +.... .....++.+++.+||+.||++|||++|+++
T Consensus 262 ~~~----~~~~~~~~~~~-------~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 262 TPF----QQLKQVVEEPS-------PQLPA----DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CHH----HHHHHHHHSCC-------CCCCG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred chH----HHHHHHhcCCC-------CCCCc----ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 211 11222222211 11110 112236889999999999999999999976
No 208
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=331.97 Aligned_cols=244 Identities=22% Similarity=0.304 Sum_probs=189.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC----chhHHHHHHHHHHHhccCCCCccceEEEEE--eCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG----SQRFKEFQTEVEAIGKIRHSNIVTLRAYYW--SVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~lV~e~~ 481 (714)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 47999999999999975 58899999997642 234567999999999999999999999985 445789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
+++ |.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 91 VCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp SEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred cCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 876 7777765432 468999999999999999999999 89999999999999999999999999999765321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC--CCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK--PSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||...
T Consensus 163 ~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (305)
T 2wtk_C 163 AA--------------------------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216 (305)
T ss_dssp CS--------------------------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cc--------------------------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 10 11122345788999999997654 378999999999999999999999432
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+........... .... ....+.+++.+||+.||++|||++|+++
T Consensus 217 -----~~~~~~~~i~~~~~~--------~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 217 -----NIYKLFENIGKGSYA--------IPGD-----CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp -----SHHHHHHHHHHCCCC--------CCSS-----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----hHHHHHHHHhcCCCC--------CCCc-----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 122222222222111 1111 1235789999999999999999999985
No 209
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.2e-39 Score=333.45 Aligned_cols=246 Identities=22% Similarity=0.291 Sum_probs=178.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhH-HHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|... +|+.||||++..... ... +.+..+...++.++||||+++++++...+..++||||++ |+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 91 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TS 91 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EE
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cc
Confidence 47999999999999984 689999999976532 222 334455556888899999999999999999999999997 58
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++...... ...+++..+..|+.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++......
T Consensus 92 l~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 164 (290)
T 3fme_A 92 LDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV-- 164 (290)
T ss_dssp HHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred hHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc--
Confidence 88877531100 1468999999999999999999999 7 99999999999999999999999999998653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc----CCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL----KVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
......||+.|+|||.+ .+..++.++||||||+++|||+||+.||....
T Consensus 165 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (290)
T 3fme_A 165 ---------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217 (290)
T ss_dssp --------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred ---------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC
Confidence 11223478889999996 56678999999999999999999999995432
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... .+........ +..... .....+.+++.+||+.||++|||++|+++
T Consensus 218 ~~~~----~~~~~~~~~~-------~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 218 TPFQ----QLKQVVEEPS-------PQLPAD----KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CHHH----HHHHHHHSCC-------CCCCTT----TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred chHH----HHHHHhccCC-------CCcccc----cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 2211 1111222211 111111 11236889999999999999999999976
No 210
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=338.47 Aligned_cols=254 Identities=23% Similarity=0.284 Sum_probs=192.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|.+.+ .||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L 116 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEH
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcH
Confidence 589999999999999864 59999987542 22335678899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCC
Q 005102 487 ATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPT 566 (714)
Q Consensus 487 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 566 (714)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ ++.+||+|||+++.........
T Consensus 117 ~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~- 186 (319)
T 2y4i_B 117 YSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR- 186 (319)
T ss_dssp HHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccccc-
Confidence 99997653 358999999999999999999999 8999999999999998 6799999999987643211100
Q ss_pred ccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC---------CCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 567 LQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV---------VKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
.........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.
T Consensus 187 ----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 244 (319)
T 2y4i_B 187 ----------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244 (319)
T ss_dssp -----------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSS
T ss_pred ----------------------cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 0112223457889999999864 457999999999999999999999994
Q ss_pred cCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 638 QVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
.... ............ +...... ...++.+++.+||+.||++|||++++++.|+++...
T Consensus 245 ~~~~-----~~~~~~~~~~~~-------~~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 245 TQPA-----EAIIWQMGTGMK-------PNLSQIG----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp SCCH-----HHHHHHHHTTCC-------CCCCCSS----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCH-----HHHHHHhccCCC-------CCCCcCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 3211 111111111111 1111100 112478999999999999999999999999998653
No 211
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.4e-39 Score=335.49 Aligned_cols=260 Identities=23% Similarity=0.375 Sum_probs=178.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 100 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBH
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCch
Confidence 47999999999999864 58999999987543 23346788999999999999999999999999999999999999999
Q ss_pred hhhhhCCC--CCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 487 ATALHGKP--GMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 487 ~~~l~~~~--~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
.+++.... .......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp HHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred HHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 99986310 00011458999999999999999999999 89999999999999999999999999999865432110
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCCCCc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSE 643 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~ 643 (714)
. .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......
T Consensus 178 ~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 234 (303)
T 2vwi_A 178 T-----------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 234 (303)
T ss_dssp ---------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred c-----------------------chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh
Confidence 0 0111223457889999999865 568999999999999999999999995432211
Q ss_pred chhHHHHHHHHhhcCC-ccc-ccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 644 MDLVNWMQLCIEEKKP-LAD-VLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 644 ~~l~~~~~~~~~~~~~-~~~-~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. .......... ... ..++..... ....+.+++.+||+.||++|||++|+++
T Consensus 235 --~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 235 --V---LMLTLQNDPPSLETGVQDKEMLKK-----YGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp --H---HHHHHTSSCCCTTC-----CCCCC-----CCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --H---HHHHhccCCCccccccccchhhhh-----hhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1 1111111111 000 011111111 1235789999999999999999999975
No 212
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.4e-40 Score=352.11 Aligned_cols=248 Identities=12% Similarity=0.040 Sum_probs=172.9
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhcc--CCCCccceE-------EEEEeCC--
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKI--RHSNIVTLR-------AYYWSVD-- 472 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~~~~-- 472 (714)
.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++...+
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 357999999999999976 689999999987543 2345677885444444 699988755 5554332
Q ss_pred ---------------ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCcee
Q 005102 473 ---------------EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVR------VKIIKGIAKGLVYLHEFSPKKYVH 531 (714)
Q Consensus 473 ---------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~------~~i~~~ia~gL~~LH~~~~~~ivH 531 (714)
..++||||++ |+|.+++.... ..+++..+ ..++.||+.||+|||+ ++|+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-----FVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 3799999998 89999997542 23455556 7888999999999999 89999
Q ss_pred cCCCCCCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-
Q 005102 532 GDLKPSNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV- 610 (714)
Q Consensus 532 rDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~- 610 (714)
|||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~-------------------------------~~~~~~t~~y~aPE~~~~~ 266 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR-------------------------------GPASSVPVTYAPREFLNAS 266 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE-------------------------------EEGGGSCGGGCCHHHHTCS
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC-------------------------------ccCccCCcCCcChhhccCC
Confidence 999999999999999999999999854311 001234688999999987
Q ss_pred -CCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHcc
Q 005102 611 -VKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACV 689 (714)
Q Consensus 611 -~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl 689 (714)
..++.++|||||||++|||+||+.||........... ................ ........+.+++.+||
T Consensus 267 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L 337 (371)
T 3q60_A 267 TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW--------KRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFL 337 (371)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCC--------CBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHT
T ss_pred CCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccch--------hhhhhhhccccccchh-hccCCCHHHHHHHHHHc
Confidence 6799999999999999999999999954422211000 0000000000000000 00112346889999999
Q ss_pred CCCCCCCCCHHHHHH
Q 005102 690 HSSPEKRPTMRHISD 704 (714)
Q Consensus 690 ~~dP~~RPt~~evl~ 704 (714)
+.||++|||++|+++
T Consensus 338 ~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 338 NFDRRRRLLPLEAME 352 (371)
T ss_dssp CSSTTTCCCHHHHTT
T ss_pred CCChhhCCCHHHHhc
Confidence 999999999999864
No 213
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.3e-38 Score=337.97 Aligned_cols=254 Identities=21% Similarity=0.283 Sum_probs=194.6
Q ss_pred ccccccCceEEEEEEE-C-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC------ccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVL-E-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN------IVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|+||.||+|.. . +++.||||++.... ...+.+.+|+++++.++|++ ++++++++...+..++||||
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 98 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL 98 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence 4799999999999997 3 58899999997543 33467889999999987654 99999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-----------------
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH----------------- 543 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~----------------- 543 (714)
+ +++|.+++..... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.
T Consensus 99 ~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 99 L-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp C-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred C-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9 8899999976532 358899999999999999999999 89999999999999987
Q ss_pred --CCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHH
Q 005102 544 --NMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYS 621 (714)
Q Consensus 544 --~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS 621 (714)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 219 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEH-------------------------------HSTLVSTRHYRAPEVILALGWSQPCDVWS 219 (339)
T ss_dssp ESCCCEEECCCSSCEETTSC-------------------------------CCSSCSCGGGCCHHHHTTSCCCTHHHHHH
T ss_pred ccCCCceEeeCcccccCccc-------------------------------cccccCCccccChHHhhCCCCCcchhhHH
Confidence 668999999998753211 12335688999999999999999999999
Q ss_pred HHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCC-------cccc---------------------cCCCCCCCCC
Q 005102 622 YGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKP-------LADV---------------------LDPYLAPDAD 673 (714)
Q Consensus 622 ~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~---------------------~d~~~~~~~~ 673 (714)
|||++|||++|+.||.... ..+....+......... .... ..+.......
T Consensus 220 lG~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (339)
T 1z57_A 220 IGCILIEYYLGFTVFPTHD--SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLS 297 (339)
T ss_dssp HHHHHHHHHHSSCSCCCSC--HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSC
T ss_pred HHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhccc
Confidence 9999999999999995332 22222222111110000 0000 0000000011
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 674 KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 674 ~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.......+.+++.+||+.||++|||++|+++
T Consensus 298 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 298 QDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred chhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 1234567899999999999999999999985
No 214
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-38 Score=331.21 Aligned_cols=244 Identities=22% Similarity=0.326 Sum_probs=194.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC---------chhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG---------SQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV 477 (714)
+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence 47999999999999986 58999999997543 122356889999999996 99999999999999999999
Q ss_pred EeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 478 YDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 478 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 103 FDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EECCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 9999999999999754 458999999999999999999999 8999999999999999999999999999876
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC------CCCCCchhhhHHHHHHHHHHHh
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK------VVKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~~DVwS~Gvvl~ellt 631 (714)
..... ......||+.|+|||.+. ...++.++||||||+++|||++
T Consensus 174 ~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~ 224 (298)
T 1phk_A 174 LDPGE-----------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224 (298)
T ss_dssp CCTTC-----------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred cCCCc-----------------------------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH
Confidence 43211 112335688999999984 4568999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|+.||.... . .............. ..+ ........+.+++.+||+.||++|||++|+++
T Consensus 225 g~~p~~~~~--~---~~~~~~~~~~~~~~---~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 225 GSPPFWHRK--Q---MLMLRMIMSGNYQF---GSP------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp SSCSSCCSS--H---HHHHHHHHHTCCCC---CTT------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCCCCcCcc--H---HHHHHHHhcCCccc---Ccc------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 999994321 1 11222222221110 001 00112336889999999999999999999875
No 215
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.5e-39 Score=343.43 Aligned_cols=250 Identities=23% Similarity=0.339 Sum_probs=175.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeC------CceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV------DEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 479 (714)
+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++... ...++|||
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e 114 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence 47999999999999975 5899999999764 233456788999999999999999999999754 56799999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 115 ~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 115 LM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CC-CEECC------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred cc-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 99 7899988854 348999999999999999999999 899999999999999999999999999997542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 184 ~-------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 184 D-------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp --------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred c-------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 1 1123457889999999977 6789999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCC-----------CC--CCCCcH----HHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPY-----------LA--PDADKE----EEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~-----------~~--~~~~~~----~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
. ...+....+..... .+..+..... +. +..... .....+.+++.+||..||++|||++|
T Consensus 233 ~--~~~~~l~~i~~~~g--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e 308 (367)
T 2fst_X 233 T--DHIDQLKLILRLVG--TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308 (367)
T ss_dssp S--SHHHHHHHHHHHHC--SCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred C--CHHHHHHHHHHHhC--CCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHH
Confidence 2 22222221111111 0000100000 00 000000 01235789999999999999999999
Q ss_pred HHH
Q 005102 702 ISD 704 (714)
Q Consensus 702 vl~ 704 (714)
+++
T Consensus 309 ~L~ 311 (367)
T 2fst_X 309 ALA 311 (367)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 216
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-38 Score=346.32 Aligned_cols=256 Identities=21% Similarity=0.223 Sum_probs=192.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC--------CCCccceEEEEE----eCCcee
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR--------HSNIVTLRAYYW----SVDEKL 475 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~----~~~~~~ 475 (714)
+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ |+||+++++++. .....+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 47999999999999975 4889999999754 233467899999999995 788999999988 455789
Q ss_pred EEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCC---------
Q 005102 476 LIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNM--------- 545 (714)
Q Consensus 476 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~--------- 545 (714)
+||||+ +++|.+.+..... ..+++..++.|+.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 999999 5677766654422 458999999999999999999999 8 999999999999999775
Q ss_pred ----------------------------------------CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccc
Q 005102 546 ----------------------------------------EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSV 585 (714)
Q Consensus 546 ----------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (714)
.+||+|||+++.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------------------------ 249 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------------------------ 249 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------------------------
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------------------------
Confidence 7999999999764321
Q ss_pred cceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcch-hHHHHHHHHhh-cC-----
Q 005102 586 SLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMD-LVNWMQLCIEE-KK----- 658 (714)
Q Consensus 586 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~-l~~~~~~~~~~-~~----- 658 (714)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||......... -...+...... +.
T Consensus 250 -------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 322 (397)
T 1wak_A 250 -------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322 (397)
T ss_dssp -------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHH
T ss_pred -------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHH
Confidence 12335789999999999999999999999999999999999999544332211 11111111110 00
Q ss_pred -----CcccccCCCC--------CC----------CCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 659 -----PLADVLDPYL--------AP----------DADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 659 -----~~~~~~d~~~--------~~----------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...+...... .+ ..........+.+++.+||+.||++|||++|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 323 IVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000000000 00 0012345667899999999999999999999975
No 217
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.4e-39 Score=346.74 Aligned_cols=256 Identities=21% Similarity=0.336 Sum_probs=184.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCc------eeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE------KLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lV~e~~~ 482 (714)
+.||+|+||.||+|++.++..||+|++...... ..+|+++++.++||||+++++++...+. .++||||++
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~ 121 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC
Confidence 579999999999999988778999988654322 2469999999999999999999976543 789999998
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC-CCCCeEEcccchhhhhhcc
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG-HNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~ 561 (714)
++.+......... ...+++..+..++.||++||+|||+ .+|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 122 ~~l~~~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 122 ETVYRASRHYAKL---KQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp EEHHHHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccHHHHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 7543333221100 1468999999999999999999999 8999999999999999 7999999999999865321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 196 ~-----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 196 E-----------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp C-----------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C-----------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 11234568899999998765 58999999999999999999999995322
Q ss_pred CCcchhHHHHHHH-------H-hhcCCcccccCCCCCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLC-------I-EEKKPLADVLDPYLAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~-------~-~~~~~~~~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ...+...+... + .......+..-+....... ......++.+++.+||+.||++|||+.|+++
T Consensus 247 ~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 247 G-IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp H-HHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H-HHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1 11122211110 0 0000000000011110000 0012236889999999999999999999975
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5e-39 Score=339.09 Aligned_cols=245 Identities=20% Similarity=0.293 Sum_probs=187.1
Q ss_pred cccccccCceEEEEEEECC-CcEEEEEEeCCCCc--------hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEE
Q 005102 408 AFVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS--------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 478 (714)
.+.||+|+||.||+|.... ++.||||++..... .....+.+|++++++++||||+++++++... ..++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-ceEEEE
Confidence 3579999999999999864 88999999875421 1224588999999999999999999998765 489999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC---eEEcccchh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLA 555 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla 555 (714)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||++
T Consensus 94 e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 94 ELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp ECCTTEETHHHHSTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred ecCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 999999999998754 458999999999999999999999 89999999999999987654 999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHhC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~elltG 632 (714)
+..... .......||+.|+|||++. ...++.++|||||||++|||++|
T Consensus 165 ~~~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g 215 (322)
T 2ycf_A 165 KILGET-----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215 (322)
T ss_dssp EECCCC-----------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHS
T ss_pred eecccc-----------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhC
Confidence 754311 0011123688899999973 56789999999999999999999
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
+.||....... .+...+ ........ +.... .....+.+++.+||+.||++|||++|+++
T Consensus 216 ~~pf~~~~~~~-~~~~~~---~~~~~~~~----~~~~~-----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 216 YPPFSEHRTQV-SLKDQI---TSGKYNFI----PEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SCSSCSTTCSS-CHHHHH---HHTCCCCC----HHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCcccchHH-HHHHHH---HhCccccC----chhhh-----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 99995433221 222211 11111100 00000 11236889999999999999999999874
No 219
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.7e-38 Score=365.06 Aligned_cols=251 Identities=19% Similarity=0.304 Sum_probs=198.3
Q ss_pred cccccccCceEEEEEEECC----CcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccC
Q 005102 408 AFVLGKSGIGIVYKVVLED----GHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIP 482 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 482 (714)
.+.||+|+||.||+|.+.. +..||||++.... ....+.|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~ 473 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 473 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence 4579999999999999753 4679999987643 333467999999999999999999999984 567899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccC
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 562 (714)
+|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 474 ~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 474 LGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 999999997553 358999999999999999999999 899999999999999999999999999998653211
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHh-CCCccccCCC
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMIT-GRTAVVQVGS 641 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~~~~ 641 (714)
........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 546 ---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~- 597 (656)
T 2j0j_A 546 ---------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK- 597 (656)
T ss_dssp -----------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-
T ss_pred ---------------------------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-
Confidence 011122345778999999988899999999999999999997 999994322
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhc
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIV 711 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~ 711 (714)
.. +.+........ +..... ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 598 -~~---~~~~~i~~~~~-------~~~~~~-----~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 598 -NN---DVIGRIENGER-------LPMPPN-----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -HH---HHHHHHHHTCC-------CCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HH---HHHHHHHcCCC-------CCCCcc-----ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 11 22222222111 111111 12368899999999999999999999999999864
No 220
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=333.47 Aligned_cols=244 Identities=23% Similarity=0.345 Sum_probs=187.9
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEe------CCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWS------VDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~------~~~~~lV~e~ 480 (714)
+.||+|+||.||+|++. +|+.||||++...... .+.+.+|+++++++ +||||+++++++.. .+..++||||
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSST-THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCccc-HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 57999999999999985 5899999998765332 36789999999999 79999999999987 4578999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 109 ~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 109 CGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp CTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred CCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 999999999976432 458999999999999999999999 8999999999999999999999999999876532
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCc
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTA 635 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p 635 (714)
.. .......||+.|+|||.+. +..++.++|||||||++|||++|+.|
T Consensus 182 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 233 (326)
T 2x7f_A 182 TV----------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233 (326)
T ss_dssp -------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred Cc----------------------------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence 11 1112335788999999987 56789999999999999999999999
Q ss_pred cccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 636 VVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 636 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|..... ............ +...... ....+.+++.+||..||++|||++++++
T Consensus 234 ~~~~~~-----~~~~~~~~~~~~-------~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 234 LCDMHP-----MRALFLIPRNPA-------PRLKSKK----WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp TTTSCH-----HHHHHHHHHSCC-------CCCSCSC----SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCcH-----HHHHHHhhcCcc-------ccCCccc----cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 943221 111111111111 1111111 1236889999999999999999999986
No 221
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.8e-38 Score=340.03 Aligned_cols=248 Identities=23% Similarity=0.332 Sum_probs=187.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCce------eEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEK------LLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~lV~e 479 (714)
+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.. ++|||
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 127 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence 47999999999999976 58999999997643 33356789999999999999999999999876654 99999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+. ++|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 128 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 128 FMQ-TDLQKIMG--------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCC-EEHHHHTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred ccc-ccHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 997 68988874 348999999999999999999999 899999999999999999999999999997543
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 196 ~~-------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 196 AE-------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp -----------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cC-------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 11 123356889999999987 6789999999999999999999999943
Q ss_pred CCCCcchhHHHHHHHHhh-cCCcccccCCC-----------C--CCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 639 VGSSEMDLVNWMQLCIEE-KKPLADVLDPY-----------L--APDADK----EEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~-----------~--~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
.. ..+. +...... +.+..+..... . ...... ......+.+++.+||+.||++|||++
T Consensus 245 ~~--~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 319 (371)
T 4exu_A 245 KD--YLDQ---LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 319 (371)
T ss_dssp SS--HHHH---HHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred CC--hHHH---HHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHH
Confidence 21 1111 1111110 00000000000 0 000000 01134688999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
|+++
T Consensus 320 ell~ 323 (371)
T 4exu_A 320 QALT 323 (371)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9875
No 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.6e-38 Score=347.46 Aligned_cols=256 Identities=22% Similarity=0.337 Sum_probs=184.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC------ceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD------EKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e~~ 481 (714)
+.||+|+||.||+|++. +|+.||||++..... .+.+|+++|++++||||+++++++...+ ..++||||+
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~ 135 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECC
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcc
Confidence 47999999999999986 489999999865432 2347999999999999999999986532 257999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-CCeEEcccchhhhhhc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-MEPHVSDFGLARLANI 560 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~ 560 (714)
++ ++.+.+..... ....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||+++....
T Consensus 136 ~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 136 PE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 75 66665542100 01468999999999999999999999 899999999999999965 5689999999986432
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
.. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 210 ~~-----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 210 GE-----------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp TC-----------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC-----------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 11 11234568999999999765 6899999999999999999999999532
Q ss_pred CCCcchhHHHHHHH-------H-hhcCCcccccCCCCCCCCC----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLC-------I-EEKKPLADVLDPYLAPDAD----KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~-------~-~~~~~~~~~~d~~~~~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.. ...+.+.+... + .......+..-+.+..... ......++.+|+.+||+.||++|||+.|+++
T Consensus 261 ~~-~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 261 SG-VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp SH-HHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CH-HHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 21 11122222110 0 0000111111111111000 0011246889999999999999999999974
No 223
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.8e-38 Score=338.03 Aligned_cols=192 Identities=23% Similarity=0.317 Sum_probs=162.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CC-----CccceEEEEEeCCceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HS-----NIVTLRAYYWSVDEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~lV~e~~ 481 (714)
+.||+|+||+||+|... +++.||||++.... ....++.+|+++++.++ |+ +|+++++++...+..++||||+
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 57999999999999976 58899999997542 33467788999988885 44 4999999999999999999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC--CCCCeEEcccchhhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG--HNMEPHVSDFGLARLAN 559 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla~~~~ 559 (714)
+ |+|.+++..... ..+++..+..++.|++.||+|||+.. .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 139 ~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 139 S-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp C-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred C-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 6 599999976532 35899999999999999999999421 6899999999999994 57889999999997653
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 213 ~~-------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 213 QR-------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CC-------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc-------------------------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 1234568899999999999999999999999999999999999953
No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.6e-38 Score=328.20 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=186.3
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEe-------------CCc
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS-------------VDE 473 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------------~~~ 473 (714)
.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 357999999999999975 6899999999653 3345678999999999999999999999865 346
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 789999999999999997543 457889999999999999999999 899999999999999999999999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCchhhhHHHHHHHHHHHhC
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DVwS~Gvvl~elltG 632 (714)
+++................+ ..........||+.|+|||.+.+. .++.++|||||||++|||++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~- 226 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLP--------------GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY- 226 (303)
T ss_dssp CCSCTTC---------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred chhhcccccchhcccccccc--------------ccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence 99865422110000000000 001122344578899999999764 68999999999999999998
Q ss_pred CCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 633 RTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 633 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
||.. ..+.............. ..+.... .....+.+++.+||+.||++|||++|+++
T Consensus 227 --p~~~----~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 227 --PFST----GMERVNILKKLRSVSIE----FPPDFDD-----NKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --CCSS----HHHHHHHHHHHHSTTCC----CCTTCCT-----TTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --ccCC----chhHHHHHHhccccccc----cCccccc-----cchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 4421 11112222222111111 1111111 12235789999999999999999999986
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=335.17 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=185.3
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEE--------------eCCc
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYW--------------SVDE 473 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--------------~~~~ 473 (714)
+.||+|+||.||+|.... ++.||||++........+.+.+|++++++++||||+++++++. ..+.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence 479999999999999875 8999999998776666788999999999999999999999884 3356
Q ss_pred eeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC-CCCCeEEccc
Q 005102 474 KLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG-HNMEPHVSDF 552 (714)
Q Consensus 474 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DF 552 (714)
.++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+||
T Consensus 97 ~~lv~e~~~-~~L~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 97 VYIVQEYME-TDLANVLEQ-------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp EEEEEECCS-EEHHHHHTT-------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeeccC-CCHHHHhhc-------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 799999997 699999864 348899999999999999999999 8999999999999997 5679999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHh
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~ellt 631 (714)
|+++........ ........+|..|+|||.+.+ ..++.++||||||+++|||+|
T Consensus 166 g~~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~ 220 (320)
T 2i6l_A 166 GLARIMDPHYSH-------------------------KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220 (320)
T ss_dssp TTCBCC---------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCccc-------------------------ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh
Confidence 999865321100 011122345788999998865 678999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcCCc------------ccccCCCCC-CCCCc----HHHHHHHHHHHhHccCCCCC
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKKPL------------ADVLDPYLA-PDADK----EEEIIAVLKIAMACVHSSPE 694 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~d~~~~-~~~~~----~~~~~~l~~li~~Cl~~dP~ 694 (714)
|+.||.... .. ..+.......... ......... +.... .....++.+++.+||+.||+
T Consensus 221 g~~pf~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 295 (320)
T 2i6l_A 221 GKTLFAGAH--EL---EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295 (320)
T ss_dssp SSCSSCCSS--HH---HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGG
T ss_pred CCCCCCCCC--HH---HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCcc
Confidence 999995332 11 1111111111000 000000000 00000 01134688999999999999
Q ss_pred CCCCHHHHHH
Q 005102 695 KRPTMRHISD 704 (714)
Q Consensus 695 ~RPt~~evl~ 704 (714)
+|||++|+++
T Consensus 296 ~Rpt~~ell~ 305 (320)
T 2i6l_A 296 DRLTAEEALS 305 (320)
T ss_dssp GSCCHHHHHT
T ss_pred ccCCHHHHhC
Confidence 9999999975
No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-38 Score=342.46 Aligned_cols=256 Identities=22% Similarity=0.271 Sum_probs=186.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCc-----------hhHHHHHHHHHHHhccCCCCccceEEEEEeC-----C
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS-----------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----D 472 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~ 472 (714)
+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++... .
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 107 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence 57999999999999998899999999865321 1236799999999999999999999998653 3
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEccc
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDF 552 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 552 (714)
..++||||++ |+|.+.+.... ..+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 108 KLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp EEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred eEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEEec
Confidence 5699999997 68999887553 458999999999999999999999 89999999999999999999999999
Q ss_pred chhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHh
Q 005102 553 GLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMIT 631 (714)
Q Consensus 553 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~ellt 631 (714)
|+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 179 g~~~~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 229 (362)
T 3pg1_A 179 NLAREDTAD-----------------------------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229 (362)
T ss_dssp TC--------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred Ccccccccc-----------------------------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh
Confidence 999753321 11223356888999999876 678999999999999999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHhhcC----------CcccccCCCCCCCC--Cc----HHHHHHHHHHHhHccCCCCCC
Q 005102 632 GRTAVVQVGSSEMDLVNWMQLCIEEKK----------PLADVLDPYLAPDA--DK----EEEIIAVLKIAMACVHSSPEK 695 (714)
Q Consensus 632 G~~p~~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~d~~~~~~~--~~----~~~~~~l~~li~~Cl~~dP~~ 695 (714)
|+.||.... ..+....+........ ...+.......... .. ......+.+++.+||+.||++
T Consensus 230 g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 307 (362)
T 3pg1_A 230 RKALFRGST--FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307 (362)
T ss_dssp SSCSCCCSS--HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCCCCC--HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhh
Confidence 999994322 1111111111100000 00000000000000 00 011235889999999999999
Q ss_pred CCCHHHHHH
Q 005102 696 RPTMRHISD 704 (714)
Q Consensus 696 RPt~~evl~ 704 (714)
|||++|+++
T Consensus 308 Rpt~~ell~ 316 (362)
T 3pg1_A 308 RISTEQALR 316 (362)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHHc
Confidence 999999975
No 227
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.8e-38 Score=325.92 Aligned_cols=244 Identities=24% Similarity=0.316 Sum_probs=193.0
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCC--CchhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 357999999999999986 5899999998654 2334578999999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC---CCeEEcccchhhhhhcc
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN---MEPHVSDFGLARLANIA 561 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~ 561 (714)
+|.+.+... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.+ +.+||+|||+++.....
T Consensus 107 ~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 107 ELFDEIIKR------KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp BHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 999988654 458999999999999999999999 899999999999999764 47999999999865321
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGS 641 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~ 641 (714)
. ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||....
T Consensus 178 ~-----------------------------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~- 226 (287)
T 2wei_A 178 T-----------------------------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN- 226 (287)
T ss_dssp S-----------------------------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred C-----------------------------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC-
Confidence 1 0111124678999999875 58999999999999999999999995321
Q ss_pred CcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 642 SEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 642 ~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
. ............... .+.. ......+.+++.+||+.||++|||++|+++
T Consensus 227 -~---~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 227 -E---YDILKRVETGKYAFD---LPQW------RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -H---HHHHHHHHHCCCCCC---SGGG------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -H---HHHHHHHHcCCCCCC---chhh------hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1 122222222211100 0000 011236889999999999999999999987
No 228
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.5e-38 Score=339.16 Aligned_cols=255 Identities=21% Similarity=0.242 Sum_probs=194.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCch-----------------hHHHHHHHHHHHhccCCCCccceEEEEEeC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQ-----------------RFKEFQTEVEAIGKIRHSNIVTLRAYYWSV 471 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 471 (714)
+.||+|+||.||+|.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 4799999999999999 8999999998753211 127899999999999999999999999999
Q ss_pred CceeEEEeccCCCCHhhh------hhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC
Q 005102 472 DEKLLIYDYIPNGSLATA------LHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM 545 (714)
Q Consensus 472 ~~~~lV~e~~~~gsL~~~------l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~ 545 (714)
+..++||||+++|+|.++ +..... ..+++..+..++.|++.||+|||+. .+|+||||||+||+++.++
T Consensus 116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYT----CFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SEEEEEEECCTTCBSSEESSSEESSCSSSC----CCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCCCGGGEEECTTS
T ss_pred CeEEEEEeccCCCcHHHHHHHhhhhhhccc----cCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCCChHhEEEcCCC
Confidence 999999999999999998 544211 5699999999999999999999962 5899999999999999999
Q ss_pred CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCC-CCCc-hhhhHHHH
Q 005102 546 EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVV-KPSQ-KWDIYSYG 623 (714)
Q Consensus 546 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-~~DVwS~G 623 (714)
.+||+|||+++..... ......||+.|+|||.+.+. .++. ++||||||
T Consensus 190 ~~kl~dfg~~~~~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG 239 (348)
T 2pml_X 190 RVKLSDFGESEYMVDK------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG 239 (348)
T ss_dssp CEEECCCTTCEECBTT------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHH
T ss_pred cEEEeccccccccccc------------------------------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHH
Confidence 9999999998754211 11234568899999999877 5666 99999999
Q ss_pred HHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccc----cCCCCCCC--CCcHHHHHHHHHHHhHccCCCCCCCC
Q 005102 624 VILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADV----LDPYLAPD--ADKEEEIIAVLKIAMACVHSSPEKRP 697 (714)
Q Consensus 624 vvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~d~~~~~~--~~~~~~~~~l~~li~~Cl~~dP~~RP 697 (714)
+++|||++|+.||...... . +............... ..+..... .........+.+++.+||+.||++||
T Consensus 240 ~il~~l~~g~~pf~~~~~~-~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 240 ICLYVMFYNVVPFSLKISL-V---ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp HHHHHHHHSSCSSCCSSCS-H---HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHHHhCCCCCCCCCcH-H---HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 9999999999999543221 1 1222211111111100 00000000 00011234688999999999999999
Q ss_pred CHHHHHH
Q 005102 698 TMRHISD 704 (714)
Q Consensus 698 t~~evl~ 704 (714)
|++|+++
T Consensus 316 s~~e~l~ 322 (348)
T 2pml_X 316 TSEDALK 322 (348)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999986
No 229
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.6e-38 Score=335.91 Aligned_cols=256 Identities=21% Similarity=0.295 Sum_probs=192.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~ 481 (714)
+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~ 112 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc
Confidence 47999999999999976 588999999986433 3346789999999999999999999999765 3679999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
. |+|.+++... .+++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~-~~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 113 E-TDLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp S-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred C-cCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 7 5999988643 48999999999999999999999 89999999999999999999999999999865422
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 182 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 236 (364)
T 3qyz_A 182 HDH-------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236 (364)
T ss_dssp GCB-------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCc-------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence 110 111234467999999998754 458999999999999999999999994332
Q ss_pred CCcchhHHHHHHHHhhcCCcccccC------------CCC-CCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLD------------PYL-APDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d------------~~~-~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
..+....+....... ..+... ... ...... ......+.+++.+||+.||++|||++|++
T Consensus 237 --~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 312 (364)
T 3qyz_A 237 --YLDQLNHILGILGSP--SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312 (364)
T ss_dssp --GGGHHHHHHHHHCSC--CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred --hHHHHHHHHHHhCCC--CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 222222221111100 000000 000 000000 01123578999999999999999999997
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 313 ~ 313 (364)
T 3qyz_A 313 A 313 (364)
T ss_dssp T
T ss_pred c
Confidence 5
No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.8e-38 Score=330.16 Aligned_cols=244 Identities=21% Similarity=0.313 Sum_probs=188.4
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCC--CchhHHHHHHHHHHHhccC--CCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEG--GSQRFKEFQTEVEAIGKIR--HSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++ ||||+++++++...+..++||| +.++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 112 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence 479999999999999988999999998754 3334578999999999997 5999999999999999999999 5588
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||+++.......
T Consensus 113 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~- 181 (313)
T 3cek_A 113 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT- 181 (313)
T ss_dssp EHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccCccc-
Confidence 999999765 458999999999999999999999 89999999999999965 7999999999986542210
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-----------CCCCchhhhHHHHHHHHHHHhCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-----------VKPSQKWDIYSYGVILLEMITGR 633 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~~DVwS~Gvvl~elltG~ 633 (714)
........||+.|+|||.+.+ ..++.++||||||+++|||++|+
T Consensus 182 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 182 -------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236 (313)
T ss_dssp ---------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence 011123457899999999875 46899999999999999999999
Q ss_pred CccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 634 TAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 634 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.||...... ...+........ ........ ...+.+++.+||+.||++|||++|+++
T Consensus 237 ~pf~~~~~~----~~~~~~~~~~~~------~~~~~~~~-----~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 237 TPFQQIINQ----ISKLHAIIDPNH------EIEFPDIP-----EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CTTTTCCSH----HHHHHHHHCTTS------CCCCCCCS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CchhhHHHH----HHHHHHHHhccc------ccCCcccc-----hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 999533221 111111111111 01111111 235789999999999999999999985
No 231
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.7e-38 Score=339.92 Aligned_cols=256 Identities=21% Similarity=0.304 Sum_probs=184.2
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCC---------------
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVD--------------- 472 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------------- 472 (714)
+.||+|+||.||+|+.. +|+.||||++...... ..+|+++++.++||||+++++++...+
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 57999999999999974 6899999998754322 347999999999999999999985432
Q ss_pred -----------------------ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 005102 473 -----------------------EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKY 529 (714)
Q Consensus 473 -----------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i 529 (714)
..++||||++ |+|.+.+...... ...+++..+..|+.|+++||+|||+ .+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~gi 162 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS--GRSIPMNLISIYIYQLFRAVGFIHS---LGI 162 (383)
T ss_dssp ---------------------CCEEEEEECCCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHT---TTE
T ss_pred ccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CcC
Confidence 3789999998 5887776531100 1468999999999999999999999 899
Q ss_pred eecCCCCCCeeeC-CCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc
Q 005102 530 VHGDLKPSNILLG-HNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL 608 (714)
Q Consensus 530 vHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 608 (714)
+||||||+|||++ +++.+||+|||+|+...... ......||+.|+|||.+
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-----------------------------~~~~~~~t~~y~aPE~~ 213 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-----------------------------PSVAYICSRFYRAPELM 213 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------------------------CCCCCCCCSSCCCHHHH
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------------------------CCcCcccCCCccCHHHh
Confidence 9999999999997 68899999999998653211 12234568889999998
Q ss_pred CCCC-CCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHH--------HhhcCCcccccCCCCCCCC----CcH
Q 005102 609 KVVK-PSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLC--------IEEKKPLADVLDPYLAPDA----DKE 675 (714)
Q Consensus 609 ~~~~-~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~d~~~~~~~----~~~ 675 (714)
.+.. ++.++||||+||++|||++|+.||..... ...+...+... ........+..-+...... ...
T Consensus 214 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (383)
T 3eb0_A 214 LGATEYTPSIDLWSIGCVFGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE 292 (383)
T ss_dssp TTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCT
T ss_pred cCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCC
Confidence 7754 89999999999999999999999953211 11111111100 0000000111001110000 000
Q ss_pred HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 676 EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 676 ~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.....+.+++.+||+.||++|||+.|+++
T Consensus 293 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 293 GTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp TCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12235889999999999999999999974
No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.8e-38 Score=338.70 Aligned_cols=258 Identities=19% Similarity=0.260 Sum_probs=176.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEEEeCCc-------eeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE-------KLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-------~~lV~e~ 480 (714)
+.||+|+||.||+|++. +|+.||||++...... ...+.+|++.++.++||||+++++++...+. .++||||
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 47999999999999985 5899999998654322 2456788888999999999999999976443 7899999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCceecCCCCCCeeeCC-CCCeEEcccchhhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH--EFSPKKYVHGDLKPSNILLGH-NMEPHVSDFGLARL 557 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~ 557 (714)
+++ +|.+.+..... ....+++..+..++.|++.||.||| + ++|+||||||+|||++. ++.+||+|||+++.
T Consensus 108 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 108 VPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred ccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 976 55544332100 0145889999999999999999999 7 89999999999999996 89999999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCC-CCchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVK-PSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
..... ......||+.|+|||++.+.. ++.++|||||||++|||+||+.||
T Consensus 182 ~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf 232 (360)
T 3e3p_A 182 LSPSE-----------------------------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232 (360)
T ss_dssp CCTTS-----------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCCCC-----------------------------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCc
Confidence 53211 112345688999999987654 899999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcC-CcccccCCCC-------CCCCC--------cHHHHHHHHHHHhHccCCCCCCCCCHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKK-PLADVLDPYL-------APDAD--------KEEEIIAVLKIAMACVHSSPEKRPTMR 700 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~-------~~~~~--------~~~~~~~l~~li~~Cl~~dP~~RPt~~ 700 (714)
.... .......+........ ......++.. ..... .......+.+++.+||+.||++|||+.
T Consensus 233 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 310 (360)
T 3e3p_A 233 RGDN--SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPY 310 (360)
T ss_dssp CCSS--HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCC--hHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHH
Confidence 5322 1111111111110000 0000000000 00000 001345788999999999999999999
Q ss_pred HHHH
Q 005102 701 HISD 704 (714)
Q Consensus 701 evl~ 704 (714)
|+++
T Consensus 311 e~l~ 314 (360)
T 3e3p_A 311 EALC 314 (360)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
No 233
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.5e-38 Score=333.09 Aligned_cols=257 Identities=23% Similarity=0.289 Sum_probs=190.1
Q ss_pred ccccccCceEEEEEEEC--CCcEEEEEEeCCCCc--hhHHHHHHHHHHHhcc---CCCCccceEEEEE-----eCCceeE
Q 005102 409 FVLGKSGIGIVYKVVLE--DGHTLAVRRLGEGGS--QRFKEFQTEVEAIGKI---RHSNIVTLRAYYW-----SVDEKLL 476 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~-----~~~~~~l 476 (714)
+.||+|+||.||+|++. +|+.||||++..... .....+.+|+++++++ +||||+++++++. .....++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 96 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence 47999999999999983 588999999865321 1123567788877776 8999999999987 4567899
Q ss_pred EEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 477 IYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 477 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
||||++ |+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 97 v~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 97 VFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 999997 699999976532 348999999999999999999999 899999999999999999999999999987
Q ss_pred hhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 557 LANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 169 ~~~~~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 219 (326)
T 1blx_A 169 IYSFQ-----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219 (326)
T ss_dssp CCCGG-----------------------------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCC-----------------------------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 54311 1122345688999999999999999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcC--Cccc-------ccCCCCCCCC--CcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKK--PLAD-------VLDPYLAPDA--DKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~--~~~~-------~~d~~~~~~~--~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... ..+....+........ .... .......... ........+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 220 RGSS--DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCSS--HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCC--HHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 4322 2222221111111000 0000 0000000000 00012235789999999999999999999984
No 234
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.9e-38 Score=348.28 Aligned_cols=252 Identities=21% Similarity=0.243 Sum_probs=183.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+. |+|.
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 579999999998877778999999998653 235678999999987 89999999999999999999999995 6999
Q ss_pred hhhhCCCCCCCc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCC-------------CCeEEcccc
Q 005102 488 TALHGKPGMVSF-TPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHN-------------MEPHVSDFG 553 (714)
Q Consensus 488 ~~l~~~~~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~DFG 553 (714)
+++......... ...++..+..|+.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 999865321100 111334567899999999999999 899999999999999654 489999999
Q ss_pred hhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-------CCCCchhhhHHHHHHH
Q 005102 554 LARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-------VKPSQKWDIYSYGVIL 626 (714)
Q Consensus 554 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~~DVwS~Gvvl 626 (714)
+++........ .........||+.|+|||++.+ ..++.++|||||||++
T Consensus 174 ~a~~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il 229 (434)
T 2rio_A 174 LCKKLDSGQSS------------------------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229 (434)
T ss_dssp TCEECCC--------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHH
T ss_pred cceecCCCCcc------------------------ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHH
Confidence 99865432110 0111233467999999999975 5689999999999999
Q ss_pred HHHHh-CCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 627 LEMIT-GRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 627 ~ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
|||+| |+.||....... . ........... . ..........++.+++.+||+.||++|||+.|+++
T Consensus 230 ~ellt~g~~Pf~~~~~~~---~----~i~~~~~~~~~-----~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 230 YYILSKGKHPFGDKYSRE---S----NIIRGIFSLDE-----M-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTTSCCTTCSTTTHH---H----HHHHTCCCCCC-----C-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCCCCCCchhhH---H----HHhcCCCCccc-----c-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 99999 999994322111 1 11111111111 1 11122345567899999999999999999999975
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.1e-38 Score=336.27 Aligned_cols=245 Identities=21% Similarity=0.290 Sum_probs=167.1
Q ss_pred cccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHH-HHHhccCCCCccceEEEEEe----CCceeEEEecc
Q 005102 408 AFVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEV-EAIGKIRHSNIVTLRAYYWS----VDEKLLIYDYI 481 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 481 (714)
.++||+|+||.||+|.+. +|+.||||++.... ...+|+ ..++.++||||+++++++.. ....++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 347999999999999987 58999999986532 222333 34566799999999999976 34579999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhh
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLA 558 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~ 558 (714)
++|+|.+++..... ..+++.++..|+.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+++..
T Consensus 109 ~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 109 EGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp TTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred CCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 99999999986542 358999999999999999999999 89999999999999976 455999999998754
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 182 ~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (336)
T 3fhr_A 182 TQN------------------------------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231 (336)
T ss_dssp ----------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ccc------------------------------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 311 11223468889999999888899999999999999999999999954
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
...... ............ .....+. .......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~--~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 232 NTGQAI--SPGMKRRIRLGQ--YGFPNPE------WSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -----------------------CCCTTT------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccchhh--hhhHHHhhhccc--cccCchh------hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 322111 000000000000 0000000 0112336889999999999999999999987
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=333.34 Aligned_cols=249 Identities=21% Similarity=0.284 Sum_probs=187.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc------eeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE------KLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lV~e 479 (714)
..||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+. .++|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 109 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence 47999999999999985 58999999997643 2334678999999999999999999999987654 499999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+. |+|.+++. ..+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 110 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 110 FMQ-TDLQKIMG--------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCS-EEGGGTTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred ccc-CCHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 997 68888774 348999999999999999999999 899999999999999999999999999987542
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCcccc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQ 638 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~ 638 (714)
.. .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 178 ~~-------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 178 AE-------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp -------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred CC-------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11 122356889999999876 6789999999999999999999999953
Q ss_pred CCCCcchhHHHHHHHHhhcC-----------------CcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKK-----------------PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRH 701 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~-----------------~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 701 (714)
.. ..+....+........ .+.....+..... .......+.+++.+||+.||++|||++|
T Consensus 227 ~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dp~~Rpt~~e 302 (353)
T 3coi_A 227 KD--YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQL--FPRASPQAADLLEKMLELDVDKRLTAAQ 302 (353)
T ss_dssp SC--HHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTT--CTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred CC--HHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHh--cCCcCHHHHHHHHHHcCCCcccCCCHHH
Confidence 32 1111111111000000 0000000000000 0112346889999999999999999999
Q ss_pred HHH
Q 005102 702 ISD 704 (714)
Q Consensus 702 vl~ 704 (714)
+++
T Consensus 303 ~l~ 305 (353)
T 3coi_A 303 ALT 305 (353)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.8e-38 Score=334.78 Aligned_cols=254 Identities=20% Similarity=0.273 Sum_probs=191.8
Q ss_pred ccccccCceEEEEEEECC-C-cEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC------ccceEEEEEeCCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLED-G-HTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN------IVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lV~e~ 480 (714)
+.||+|+||.||+|.... + +.||||+++... ...+.+.+|++++++++|++ ++.+++++...+..++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 103 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL 103 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence 479999999999999753 4 689999997543 33467889999999998766 99999999999999999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee-------------------
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL------------------- 541 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl------------------- 541 (714)
+ ++++.+++..... ..+++.++..|+.||+.||+|||+ .+|+||||||+|||+
T Consensus 104 ~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 104 L-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp C-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred c-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccccc
Confidence 9 6677777765432 458999999999999999999999 899999999999999
Q ss_pred CCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHH
Q 005102 542 GHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYS 621 (714)
Q Consensus 542 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS 621 (714)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++||||
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 224 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHE-------------------------------HHTTIVATRHYRPPEVILELGWAQPCDVWS 224 (355)
T ss_dssp ESCCCEEECCCTTCEETTS-------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHH
T ss_pred cCCCcEEEeecCccccccc-------------------------------cccCCcCCCcccCCeeeecCCCCCccchHH
Confidence 5678999999999975321 112345789999999999999999999999
Q ss_pred HHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhc--------CCcccccC--------------------CCCCCCCC
Q 005102 622 YGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEK--------KPLADVLD--------------------PYLAPDAD 673 (714)
Q Consensus 622 ~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~d--------------------~~~~~~~~ 673 (714)
|||++|||++|+.||.... ..+....+....... ........ +.......
T Consensus 225 lG~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T 2eu9_A 225 IGCILFEYYRGFTLFQTHE--NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQ 302 (355)
T ss_dssp HHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSC
T ss_pred HHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccc
Confidence 9999999999999995322 222222221111100 00000000 00000011
Q ss_pred cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 674 KEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 674 ~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.......+.+++.+||+.||++|||++|+++
T Consensus 303 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 303 DSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1233557889999999999999999999874
No 238
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-37 Score=332.70 Aligned_cols=264 Identities=20% Similarity=0.267 Sum_probs=191.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-hhHHHHHHHHHHHhccCCCCccceEEEEEeC-----CceeEEEecc
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSV-----DEKLLIYDYI 481 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~ 481 (714)
+.||+|+||.||+|.+. +|+.||||++..... .....+.+|++++++++||||+++++++... ...++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 96 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM 96 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc
Confidence 47999999999999986 589999999975433 3346788999999999999999999998754 5789999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhcc
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIA 561 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 561 (714)
. |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 97 Q-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp S-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred C-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 7 6999988643 48999999999999999999999 89999999999999999999999999999876432
Q ss_pred CCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC-CCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 562 GGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV-VKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
....... ...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 166 ~~~~~~~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 166 AADNSEP------------------TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp --------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccCc------------------cccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1100000 000111234567999999998754 678999999999999999999999995332
Q ss_pred CCcchhHHHHHHHHhhcCC---cc--------cccC--CCCCCCCCc----HHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKP---LA--------DVLD--PYLAPDADK----EEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~---~~--------~~~d--~~~~~~~~~----~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
..+....+......... .. +... +... .... ......+.+++.+||+.||++|||++|++
T Consensus 228 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (353)
T 2b9h_A 228 --YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYP-AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304 (353)
T ss_dssp --HHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCC-CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred --cHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCC-CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 11111111111110000 00 0000 0000 0000 01223678999999999999999999998
Q ss_pred H
Q 005102 704 D 704 (714)
Q Consensus 704 ~ 704 (714)
+
T Consensus 305 ~ 305 (353)
T 2b9h_A 305 E 305 (353)
T ss_dssp T
T ss_pred c
Confidence 6
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=341.61 Aligned_cols=244 Identities=21% Similarity=0.272 Sum_probs=180.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
++||+|+||+||.....+|+.||||++...... .+.+|+++++++ +|||||++++++.+.+..|+||||+. |+|.
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 489999999976666667999999999765432 356899999999 79999999999999999999999996 6999
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC-----CCCeEEcccchhhhhhccC
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH-----NMEPHVSDFGLARLANIAG 562 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla~~~~~~~ 562 (714)
+++..... ..++..+..|+.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+|+......
T Consensus 106 ~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 106 EYVEQKDF-----AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp HHHHSSSC-----CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred HHHHhcCC-----CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 99986642 24455678999999999999999 89999999999999943 3468899999998654221
Q ss_pred CCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC---CCCCCchhhhHHHHHHHHHHHh-CCCcccc
Q 005102 563 GSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK---VVKPSQKWDIYSYGVILLEMIT-GRTAVVQ 638 (714)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DVwS~Gvvl~ellt-G~~p~~~ 638 (714)
.. ........||+.|+|||++. ...++.++|||||||++|||+| |+.||..
T Consensus 178 ~~-------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 178 HS-------------------------FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp ---------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred cc-------------------------eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 00 11223456899999999997 4567889999999999999999 8989832
Q ss_pred CCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 639 VGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 639 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... .... ...... . .... ........+.+++.+||+.||++|||++||++
T Consensus 233 ~~~~------~~~~-~~~~~~-~----~~~~---~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 233 SLQR------QANI-LLGACS-L----DCLH---PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTTH------HHHH-HTTCCC-C----TTSC---TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhHH------HHHH-HhccCC-c----cccC---ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 2111 1111 111111 0 0011 11123445789999999999999999999983
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.1e-37 Score=329.43 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=172.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCC-chhHHHHHHHHH-HHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGG-SQRFKEFQTEVE-AIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|... +|+.||||++.... .....++.+|+. +++.++||||+++++++...+..++||||+++ +
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~ 106 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-S 106 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-E
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-C
Confidence 47999999999999985 58999999997653 233455666766 67788999999999999999999999999975 8
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
|.+++...... ....+++..+.+++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 107 l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 180 (327)
T 3aln_A 107 FDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-- 180 (327)
T ss_dssp HHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred hHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc--
Confidence 88777531000 01458999999999999999999999 8 99999999999999999999999999987653211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc----CCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL----KVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
......||+.|+|||.+ .+..++.++||||||+++|||++|+.||....
T Consensus 181 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (327)
T 3aln_A 181 ---------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233 (327)
T ss_dssp ----------------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred ---------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 11122468889999998 45678999999999999999999999995322
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.... .+ .. ......+.+.... .......+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~----~~----~~---~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 234 SVFD----QL----TQ---VVKGDPPQLSNSE-EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --------------CC---CCCSCCCCCCCCS-SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hHHH----HH----HH---HhcCCCCCCCCcc-cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 1110 00 00 0000011111100 0012236889999999999999999999875
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.4e-38 Score=337.12 Aligned_cols=256 Identities=17% Similarity=0.223 Sum_probs=190.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-----------CCCccceEEEEEeCC----
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-----------HSNIVTLRAYYWSVD---- 472 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~~~---- 472 (714)
+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++ ||||+++++++...+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 47999999999999974 58999999997542 33467889999999886 899999999998654
Q ss_pred ceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeC------CCC
Q 005102 473 EKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLG------HNM 545 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~------~~~ 545 (714)
..++||||+ +++|.+++..... ..+++..+..|+.||+.||+|||+ + +|+||||||+|||++ ..+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred eEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcc
Confidence 679999999 8899999976432 458999999999999999999999 8 999999999999994 445
Q ss_pred CeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH
Q 005102 546 EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI 625 (714)
Q Consensus 546 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv 625 (714)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||+
T Consensus 176 ~~kl~Dfg~a~~~~~~-------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i 224 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH-------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACL 224 (373)
T ss_dssp EEEECCCTTCEETTBC-------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHH
T ss_pred eEEEcccccccccCCC-------------------------------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHH
Confidence 8999999999765321 122356889999999999999999999999999
Q ss_pred HHHHHhCCCccccCCCCcc-hhHHHHHHHHhhcCCcc-----------cccCC------CCCC------------CCCcH
Q 005102 626 LLEMITGRTAVVQVGSSEM-DLVNWMQLCIEEKKPLA-----------DVLDP------YLAP------------DADKE 675 (714)
Q Consensus 626 l~elltG~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~-----------~~~d~------~~~~------------~~~~~ 675 (714)
+|||+||+.||........ .....+......-.... ..++. .... .....
T Consensus 225 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
T 1q8y_A 225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK 304 (373)
T ss_dssp HHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCH
T ss_pred HHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCc
Confidence 9999999999954322110 00111111111000000 00000 0000 00123
Q ss_pred HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 676 EEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 676 ~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
.....+.+++.+||+.||++|||++|+++
T Consensus 305 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 305 DEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred chHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 45668899999999999999999999976
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=323.22 Aligned_cols=244 Identities=21% Similarity=0.322 Sum_probs=173.8
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch-hH-HHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ-RF-KEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.||+|+||.||+|.+. +|+.||||++...... .. +.+..+..+++.++||||+++++++...+..++||||+ ++.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 109 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTC 109 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCc
Confidence 47999999999999986 5899999999765332 22 33445556788889999999999999999999999999 555
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPK-KYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+..+..... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 110 ~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (318)
T 2dyl_A 110 AEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-- 179 (318)
T ss_dssp HHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred HHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--
Confidence 655554322 458999999999999999999998 6 99999999999999999999999999987553211
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccC-----CCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLK-----VVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
......||+.|+|||.+. ...++.++||||||+++|||++|+.||...
T Consensus 180 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (318)
T 2dyl_A 180 ---------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC 232 (318)
T ss_dssp ----------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ---------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC
Confidence 111234688899999994 456899999999999999999999999543
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... ...+......... ....... ....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~----~~~~~~~~~~~~~-------~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 233 KTD----FEVLTKVLQEEPP-------LLPGHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CSH----HHHHHHHHHSCCC-------CCCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred Ccc----HHHHHHHhccCCC-------CCCccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 221 1222222222211 1111000 1235789999999999999999999875
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.3e-38 Score=331.64 Aligned_cols=233 Identities=19% Similarity=0.277 Sum_probs=188.4
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch------hHHHHHHHHHHHhccC--CCCccceEEEEEeCCceeEEEe
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ------RFKEFQTEVEAIGKIR--HSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~e 479 (714)
+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.++++++ ||||+++++++...+..++|||
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e 128 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence 47999999999999975 5899999998764221 1245678999999996 5999999999999999999999
Q ss_pred ccCC-CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC-CCCCeEEcccchhhh
Q 005102 480 YIPN-GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG-HNMEPHVSDFGLARL 557 (714)
Q Consensus 480 ~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~ 557 (714)
|+.+ ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++ +++.+||+|||+++.
T Consensus 129 ~~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 129 RPEPVQDLFDFITER------GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp CCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred cCCCCccHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 9976 8999998764 458999999999999999999999 8999999999999999 789999999999876
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCCcc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
.... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||
T Consensus 200 ~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf 249 (320)
T 3a99_A 200 LKDT------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249 (320)
T ss_dssp CCSS------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccc------------------------------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCC
Confidence 4321 1122347889999999977665 78899999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 637 VQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 637 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
... . ........ ..... ..++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~----~-------~~~~~~~~--------~~~~~-----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 250 EHD----E-------EIIRGQVF--------FRQRV-----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CSH----H-------HHHHCCCC--------CSSCC-----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCh----h-------hhhccccc--------ccccC-----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 321 0 01111110 11111 135789999999999999999999986
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=328.23 Aligned_cols=233 Identities=19% Similarity=0.282 Sum_probs=183.6
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCch------hHHHHHHHHHHHhcc----CCCCccceEEEEEeCCceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQ------RFKEFQTEVEAIGKI----RHSNIVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~~~~~~~~~~~lV 477 (714)
+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++.++ +||||+++++++...+..++|
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v 116 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV 116 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEE
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEE
Confidence 47999999999999874 5889999999765321 223466799999998 899999999999999999999
Q ss_pred Eec-cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeC-CCCCeEEcccchh
Q 005102 478 YDY-IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLG-HNMEPHVSDFGLA 555 (714)
Q Consensus 478 ~e~-~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla 555 (714)
||| +.+++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+|||++
T Consensus 117 ~e~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 117 LERPLPAQDLFDYITEK------GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EECCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999 7899999999764 458999999999999999999999 8999999999999999 8899999999998
Q ss_pred hhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCC-CchhhhHHHHHHHHHHHhCCC
Q 005102 556 RLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKP-SQKWDIYSYGVILLEMITGRT 634 (714)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DVwS~Gvvl~elltG~~ 634 (714)
+..... ......||..|+|||++.+..+ +.++||||||+++|||++|+.
T Consensus 188 ~~~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 237 (312)
T 2iwi_A 188 ALLHDE------------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237 (312)
T ss_dssp EECCSS------------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred hhcccC------------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCC
Confidence 765321 1123346888999999876666 458999999999999999999
Q ss_pred ccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 635 AVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 635 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
||... . ........ .... ....+.+++.+||+.||++|||++|+++
T Consensus 238 pf~~~----~-------~~~~~~~~--------~~~~-----~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 238 PFERD----Q-------EILEAELH--------FPAH-----VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp SCCSH----H-------HHHHTCCC--------CCTT-----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCh----H-------HHhhhccC--------Cccc-----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99321 0 01111111 1111 1235789999999999999999999986
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.4e-37 Score=316.46 Aligned_cols=226 Identities=11% Similarity=0.079 Sum_probs=177.8
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLED-GHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
+.||+|+||.||+|++.. ++.||||++..... ...+.+.+|+.++++++||||+++++++...+..|+||||++++
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 116 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG 116 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence 479999999999999865 89999999986532 33467999999999999999999999999999999999999999
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCCC
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGGS 564 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 564 (714)
+|.+++... ....++.+|+.|++.||+|||+ ++|+||||||+|||+++++.+||+++|
T Consensus 117 ~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 117 SLQEVADTS--------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp EHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred CHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999532 3456788999999999999999 899999999999999999999998554
Q ss_pred CCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcc
Q 005102 565 PTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEM 644 (714)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~ 644 (714)
|++| ++.++|||||||++|||+||+.||........
T Consensus 175 -------------------------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~ 210 (286)
T 3uqc_A 175 -------------------------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG 210 (286)
T ss_dssp -------------------------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC
T ss_pred -------------------------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh
Confidence 4543 68999999999999999999999954322110
Q ss_pred hhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHhhhhcc
Q 005102 645 DLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHISDALDRLIVS 712 (714)
Q Consensus 645 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~i~~~ 712 (714)
... .. ..............+ ....++.+++.+||+.||++| |++|+++.|+++...
T Consensus 211 ~~~-~~-~~~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 211 LAP-AE-RDTAGQPIEPADIDR---------DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp SEE-CC-BCTTSCBCCHHHHCT---------TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred hHH-HH-HHhccCCCChhhccc---------CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 000 00 000000000000001 122358899999999999999 999999999997654
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.6e-37 Score=348.96 Aligned_cols=263 Identities=24% Similarity=0.299 Sum_probs=195.7
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCC-CchhHHHHHHHHHHHhccCCCCccceEEEEEe------CCceeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEG-GSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWS------VDEKLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~~lV~e~ 480 (714)
+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy 99 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEEC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEe
Confidence 47999999999999975 5899999998765 33445679999999999999999999999765 6677999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCC---eEEcccchhhh
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNME---PHVSDFGLARL 557 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~ 557 (714)
+++|+|.+++...... ..+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++.
T Consensus 100 ~~ggsL~~~L~~~~~~---~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 100 CEGGDLRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CSSCBHHHHHHSSSCT---TCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred CCCCCHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 9999999999865322 358899999999999999999999 89999999999999997665 89999999986
Q ss_pred hhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccc
Q 005102 558 ANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVV 637 (714)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~ 637 (714)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 174 ~~~~~-----------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~ 224 (676)
T 3qa8_A 174 LDQGE-----------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224 (676)
T ss_dssp TTSCC-----------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccc-----------------------------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 53211 1123457889999999999999999999999999999999999994
Q ss_pred cCCCCcchhHHHHHHHH---hhcCCcccccCC------CCC-CCCCcHHHHHHHHHHHhHccCCCCCCCCCHHH-----H
Q 005102 638 QVGSSEMDLVNWMQLCI---EEKKPLADVLDP------YLA-PDADKEEEIIAVLKIAMACVHSSPEKRPTMRH-----I 702 (714)
Q Consensus 638 ~~~~~~~~l~~~~~~~~---~~~~~~~~~~d~------~~~-~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e-----v 702 (714)
... ....|..... .......+.... ... +..........+.+++.+||..||++|||++| .
T Consensus 225 ~~~----~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~ 300 (676)
T 3qa8_A 225 PNW----QPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGC 300 (676)
T ss_dssp SSC----HHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTT
T ss_pred ccc----chhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHH
Confidence 321 1111110000 000000000000 000 01111234567889999999999999999987 4
Q ss_pred HHHHhhhh
Q 005102 703 SDALDRLI 710 (714)
Q Consensus 703 l~~L~~i~ 710 (714)
.+.++.+.
T Consensus 301 F~~l~~iL 308 (676)
T 3qa8_A 301 FQALDSIL 308 (676)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45555554
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-36 Score=353.35 Aligned_cols=233 Identities=21% Similarity=0.288 Sum_probs=186.6
Q ss_pred ccccccCceEEEEEEEC--CCcEEEEEEeCCCC-chhHHHHHHHHHHHhccCCCCccceEEEEEeCCc-----eeEEEec
Q 005102 409 FVLGKSGIGIVYKVVLE--DGHTLAVRRLGEGG-SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDE-----KLLIYDY 480 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~lV~e~ 480 (714)
..||+|+||.||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++...+. .|+||||
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~ 165 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY 165 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence 47999999999999986 58999999987543 3445678999999999999999999999988765 6999999
Q ss_pred cCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhc
Q 005102 481 IPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANI 560 (714)
Q Consensus 481 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 560 (714)
+++++|.+++.. .+++.+++.|+.||+.||+|||+ ++|+||||||+|||++++ .+||+|||+++....
T Consensus 166 ~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 166 VGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp CCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred CCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999887643 48999999999999999999999 899999999999999986 899999999875431
Q ss_pred cCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccCC
Q 005102 561 AGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQVG 640 (714)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~ 640 (714)
.....||+.|+|||++.+. ++.++|||||||++|||++|..||....
T Consensus 234 --------------------------------~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~ 280 (681)
T 2pzi_A 234 --------------------------------FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRY 280 (681)
T ss_dssp --------------------------------CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEE
T ss_pred --------------------------------CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccc
Confidence 1234578999999998765 4899999999999999999998883211
Q ss_pred CCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHhhhh
Q 005102 641 SSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRP-TMRHISDALDRLI 710 (714)
Q Consensus 641 ~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~i~ 710 (714)
... +............+.+++.+||+.||++|| +++++...|..+.
T Consensus 281 ~~~------------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 281 VDG------------------------LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CSS------------------------CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccc------------------------ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000 000111112334688999999999999999 5677777777653
No 248
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-36 Score=319.72 Aligned_cols=253 Identities=29% Similarity=0.553 Sum_probs=203.8
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCc--ccceEecC----CcEEEEEcCCCCccc--cCCccccCCCCC
Q 005102 19 DSLNGEGYALLSFKQSVHEDPEGSLSNWNSSDENPCS--WNGITCKE----QRVVSVSIPKKKLLG--FLPSALGSLTDL 90 (714)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~----~~~~~l~l~~~~l~g--~~p~~~~~l~~L 90 (714)
.|.+.|++||++||+++ .||. .+.+|..+ .+||. |.||+|+. .+|+.|+|++|+++| .+|+.|+++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 36778999999999999 5665 78999754 57888 99999984 799999999999999 899999999999
Q ss_pred CEEEccC-CCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 91 RHVNLRN-NKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 91 ~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|..+..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999994 999988998899999999999999988888888888888888888888888888888888888888888888
Q ss_pred CcCCCCCCcccccCcc-ccccccccCCcccccCCCC--------------------------------------------
Q 005102 170 NNFTGPLPNGFGSGLV-SLEKLNLSFNKFNGSIPSN-------------------------------------------- 204 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~-~L~~L~l~~N~l~g~~p~~-------------------------------------------- 204 (714)
|+++|.+|..++. +. +|+.|+|++|++++.+|..
T Consensus 159 N~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 8887777766643 43 5555555555554433332
Q ss_pred --CCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCCCCC
Q 005102 205 --TGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGPPLK 276 (714)
Q Consensus 205 --~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~~~ 276 (714)
+..+++|+ .|++++|+|++.+|..+..+++|+.|++++|+++|.+|....+.......+.+|+.+|+.|+.
T Consensus 238 ~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 238 GKVGLSKNLN-GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGCCCCTTCC-EEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred CcccccCCCC-EEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 23344555 677777777778888888888888888888888888888766666677788899999987764
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-35 Score=308.86 Aligned_cols=223 Identities=20% Similarity=0.268 Sum_probs=172.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCchhHHHHHHHHHHH-hccCCCCccceEEEEEe----CCceeEEEeccC
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGSQRFKEFQTEVEAI-GKIRHSNIVTLRAYYWS----VDEKLLIYDYIP 482 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~lV~e~~~ 482 (714)
++||+|+||.||+|... +++.||||++... ..+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 47999999999999985 5899999998642 4577899988 55589999999999987 667899999999
Q ss_pred CCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCC---CCCeEEcccchhhhhh
Q 005102 483 NGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGH---NMEPHVSDFGLARLAN 559 (714)
Q Consensus 483 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 559 (714)
+|+|.+++..... ..+++..+..|+.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++...
T Consensus 99 ~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 99 GGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp SCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred CCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 9999999986532 358999999999999999999999 89999999999999998 7899999999886321
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCccccC
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAVVQV 639 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~ 639 (714)
+..++.++|||||||++|||+||+.||...
T Consensus 172 --------------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 172 --------------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp --------------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred --------------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 134678999999999999999999999433
Q ss_pred CCCcchhHHHHHHHHhhcCCcccccCCCCCCC-CCcHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 005102 640 GSSEMDLVNWMQLCIEEKKPLADVLDPYLAPD-ADKEEEIIAVLKIAMACVHSSPEKRPTMRHISD 704 (714)
Q Consensus 640 ~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 704 (714)
..... . . .....+........ .........+.+++.+||+.||++|||++|+++
T Consensus 202 ~~~~~---------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 202 HGLAI---------S-P-GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ----------------C-CSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhh---------h-H-HHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 21110 0 0 00000000000000 000112346889999999999999999999986
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.5e-36 Score=328.11 Aligned_cols=237 Identities=14% Similarity=0.105 Sum_probs=172.0
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc---hhHHHHHHHHHHHhccCC-CCcc---------ceE---------
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS---QRFKEFQTEVEAIGKIRH-SNIV---------TLR--------- 465 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~niv---------~l~--------- 465 (714)
++||+|+||.||+|++. +|+.||||++..... ...+.|.+|+.+++.++| +|.. ...
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 163 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence 58999999999999965 589999999884322 224679999999999987 3211 111
Q ss_pred ---EEEEe-----CCceeEEEeccCCCCHhhhhhCCCC-CCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCC
Q 005102 466 ---AYYWS-----VDEKLLIYDYIPNGSLATALHGKPG-MVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKP 536 (714)
Q Consensus 466 ---~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp 536 (714)
.++.. ....+++|+++ +++|.+++..... ......+++..++.|+.|+++||+|||+ ++|+||||||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDiKp 239 (413)
T 3dzo_A 164 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP 239 (413)
T ss_dssp -------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred ccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCccc
Confidence 11111 12356777765 6899998841100 0001458889999999999999999999 8999999999
Q ss_pred CCeeeCCCCCeEEcccchhhhhhccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCccc--------
Q 005102 537 SNILLGHNMEPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESL-------- 608 (714)
Q Consensus 537 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-------- 608 (714)
+|||++.++.+||+|||+++..... .....| +.|+|||++
T Consensus 240 ~NILl~~~~~~kL~DFG~a~~~~~~-------------------------------~~~~~g-~~y~aPE~~~~~~~~~~ 287 (413)
T 3dzo_A 240 VDIVLDQRGGVFLTGFEHLVRDGAS-------------------------------AVSPIG-RGFAPPETTAERMLPFG 287 (413)
T ss_dssp GGEEECTTCCEEECCGGGCEETTEE-------------------------------ECCCCC-TTTCCHHHHHHHTSTTG
T ss_pred ceEEEecCCeEEEEeccceeecCCc-------------------------------cccCCC-CceeCchhhhccccccc
Confidence 9999999999999999998754321 223345 789999999
Q ss_pred --CCCCCCchhhhHHHHHHHHHHHhCCCccccCCCCcchhHHHHHHHHhhcCCcccccCCCCCCCCCcHHHHHHHHHHHh
Q 005102 609 --KVVKPSQKWDIYSYGVILLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKKPLADVLDPYLAPDADKEEEIIAVLKIAM 686 (714)
Q Consensus 609 --~~~~~s~~~DVwS~Gvvl~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~li~ 686 (714)
.+..++.++|||||||++|||+||+.||....... ....++... ... ...+.+++.
T Consensus 288 ~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~---------------~~~~~~~~~--~~~-----~~~~~~li~ 345 (413)
T 3dzo_A 288 QHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG---------------GSEWIFRSC--KNI-----PQPVRALLE 345 (413)
T ss_dssp GGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS---------------CSGGGGSSC--CCC-----CHHHHHHHH
T ss_pred cccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh---------------hHHHHHhhc--ccC-----CHHHHHHHH
Confidence 55668999999999999999999999994322111 011111111 011 136889999
Q ss_pred HccCCCCCCCCCHHHHH
Q 005102 687 ACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 687 ~Cl~~dP~~RPt~~evl 703 (714)
+||+.||++|||+.|++
T Consensus 346 ~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 346 GFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHTCSSGGGSCCHHHHT
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999977764
No 251
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.8e-36 Score=317.61 Aligned_cols=236 Identities=14% Similarity=0.180 Sum_probs=177.7
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCC--------chhHHHHHHHHHHHhccC---------CCCccceEEEEE-
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGG--------SQRFKEFQTEVEAIGKIR---------HSNIVTLRAYYW- 469 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l~~~~~- 469 (714)
.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++ ||||+++.+.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 45899999999999998 68999999997642 223477899999998886 777777777643
Q ss_pred ----------------e-------------CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005102 470 ----------------S-------------VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVY 520 (714)
Q Consensus 470 ----------------~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~ 520 (714)
+ .+..++||||+++|++.+.+.. ..+++..++.|+.||+.||+|
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHHHHHHHHH
Confidence 1 6788999999999977776643 347899999999999999999
Q ss_pred Hh-cCCCCCceecCCCCCCeeeCCCC--------------------CeEEcccchhhhhhccCCCCCccCCCCCCCCchh
Q 005102 521 LH-EFSPKKYVHGDLKPSNILLGHNM--------------------EPHVSDFGLARLANIAGGSPTLQSNRMPAEKPQE 579 (714)
Q Consensus 521 LH-~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~ 579 (714)
|| + ++|+||||||+|||++.++ .+||+|||+|+....
T Consensus 177 lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------------- 234 (336)
T 2vuw_A 177 AEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------------- 234 (336)
T ss_dssp HHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------------
T ss_pred HHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------------
Confidence 99 8 8999999999999999887 899999999986431
Q ss_pred hhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHH-HHHHHhCCCccccCCCCcchhHHHHHHHHhhcC
Q 005102 580 RQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVI-LLEMITGRTAVVQVGSSEMDLVNWMQLCIEEKK 658 (714)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvv-l~elltG~~p~~~~~~~~~~l~~~~~~~~~~~~ 658 (714)
....||+.|+|||++.+.. +.++||||+|++ .+++++|..||.. ..|........
T Consensus 235 --------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~~~~~- 290 (336)
T 2vuw_A 235 --------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYLTDKM- 290 (336)
T ss_dssp --------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHHHHHH-
T ss_pred --------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHHHHhh-
Confidence 1124688999999998766 999999998777 7889999999832 11211111100
Q ss_pred CcccccCCCCCCCCCcHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 005102 659 PLADVLDPYLAPDADKEEEIIAVLKIAMACVHSSPEKRPTMRHIS 703 (714)
Q Consensus 659 ~~~~~~d~~~~~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 703 (714)
......+.............++.+++.+||+.| |++|++
T Consensus 291 -~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 291 -LKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp -HHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred -hhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 000000001111112345667999999999976 898887
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=2.1e-31 Score=313.51 Aligned_cols=230 Identities=32% Similarity=0.477 Sum_probs=196.5
Q ss_pred cccCCchhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCcccceEecCCcEEEEEcCCCCcccc---CC-----------
Q 005102 16 GFVDSLNGEGYALLSFKQSVHEDPEGSLSNWNSSDENPCSWNGITCKEQRVVSVSIPKKKLLGF---LP----------- 81 (714)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~~~l~l~~~~l~g~---~p----------- 81 (714)
+++++.+.|++||++||+++. ||. .+++|+. +.+||.|.||+|+.++|+.|+|+++.+.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 355667889999999999995 887 8999984 458999999999988999999999999987 54
Q ss_pred ------------ccccCCCCCCEEEccCCCCcccCCh--hhcCCCCCCEEEcCCCcCcccCCccc-CCCCCCCEEeccCc
Q 005102 82 ------------SALGSLTDLRHVNLRNNKFFGSLPL--ELLEAQGLQSLVLYGNSFSGSVPNEI-GKLKYLQILDLSQN 146 (714)
Q Consensus 82 ------------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N 146 (714)
+.|+.+++|++|+|++|.++|.+|. .+.++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 4677788888888888888888888 88888888888888888888888776 78888888888888
Q ss_pred cCCCCCCcc---cccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 147 FFNGSLPVS---IVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 147 ~l~g~~p~~---~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++++..|.. +.++++|++|+|++|.+++.+|. ..+++|++|+|++|++++.+|. ++++++|+ .|++++|.++
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~-~L~Ls~n~l~ 236 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQ-HLDISGNKLS 236 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCC-EEECCSSCCC
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCC-EEECcCCcCC
Confidence 888877766 67888888888888888877665 3588999999999999988887 88999999 9999999999
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
+.+|..++.+++|++|++++|++++.+|..
T Consensus 237 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 266 (768)
T 3rgz_A 237 GDFSRAISTCTELKLLNISSNQFVGPIPPL 266 (768)
T ss_dssp SCHHHHTTTCSSCCEEECCSSCCEESCCCC
T ss_pred CcccHHHhcCCCCCEEECCCCcccCccCcc
Confidence 999999999999999999999998887765
No 253
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.8e-31 Score=281.63 Aligned_cols=238 Identities=18% Similarity=0.231 Sum_probs=212.4
Q ss_pred ccCCchhHHHHHHHHHHhccCCCCCCCCCCC---CCCCCCCcccceEec----------CCcEEEEEcCCCCccccCCcc
Q 005102 17 FVDSLNGEGYALLSFKQSVHEDPEGSLSNWN---SSDENPCSWNGITCK----------EQRVVSVSIPKKKLLGFLPSA 83 (714)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~---~~~~~~c~w~gv~c~----------~~~~~~l~l~~~~l~g~~p~~ 83 (714)
...+...|+.||++||+++..||.+.+.+|. ....++|.|.|+.|. ..+|+.|+|++|+++ .+|+.
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 3446678999999999998778888888994 445678999999995 378999999999998 78889
Q ss_pred ccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCccccc-----
Q 005102 84 LGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQ----- 158 (714)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~----- 158 (714)
++.+++|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++++++|+.|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 89999999999999999999999 89999999999999999999999999988765
Q ss_pred ----ccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCC
Q 005102 159 ----CKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLP 234 (714)
Q Consensus 159 ----l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~ 234 (714)
+++|++|+|++|+++ .+|..+. .+++|+.|+|++|+++ .+|..++++++|+ .|++++|++.+.+|..++.++
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~-~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~-~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIA-NLQNLKSLKIRNSPLS-ALGPAIHHLPKLE-ELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGG-GCTTCCEEEEESSCCC-CCCGGGGGCTTCC-EEECTTCTTCCBCCCCTTCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhc-CCCCCCEEEccCCCCC-cCchhhccCCCCC-EEECcCCcchhhhHHHhcCCC
Confidence 999999999999998 8998874 6999999999999999 5777899999999 999999999999999999999
Q ss_pred CcccccCcCCcCCCCCCCCccccCCCC
Q 005102 235 EKVYIDLTYNNLSGPIPQNGALMNRGP 261 (714)
Q Consensus 235 ~L~~l~l~~N~l~~~~p~~~~~~~~~~ 261 (714)
+|+.|++++|++.+.+|..........
T Consensus 254 ~L~~L~L~~n~~~~~~p~~~~~l~~L~ 280 (328)
T 4fcg_A 254 PLKRLILKDCSNLLTLPLDIHRLTQLE 280 (328)
T ss_dssp CCCEEECTTCTTCCBCCTTGGGCTTCC
T ss_pred CCCEEECCCCCchhhcchhhhcCCCCC
Confidence 999999999999999997755444333
No 254
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=6.7e-31 Score=307.88 Aligned_cols=240 Identities=18% Similarity=0.306 Sum_probs=207.4
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCCCCCCCC----CCC--Ccc------------cceEec-CCcEEEEEcCCCCccccC
Q 005102 20 SLNGEGYALLSFKQSVHEDPEGSLSNWNSSD----ENP--CSW------------NGITCK-EQRVVSVSIPKKKLLGFL 80 (714)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~c~-~~~~~~l~l~~~~l~g~~ 80 (714)
....|+.||++||+++ .+| +|+.++ .+| |.| .||+|+ .++|+.|+|+++++.|.+
T Consensus 266 ~~~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 266 EYIKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred cchHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 3457999999999998 455 787554 345 999 999998 589999999999999999
Q ss_pred CccccCCCCCCEEEc-cCCCCccc--------------------------------------------------------
Q 005102 81 PSALGSLTDLRHVNL-RNNKFFGS-------------------------------------------------------- 103 (714)
Q Consensus 81 p~~~~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 103 (714)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77766554
Q ss_pred --------------------CChhhcCCCCCCEEEcCCCcCcc-----------------cCCcccC--CCCCCCEEecc
Q 005102 104 --------------------LPLELLEAQGLQSLVLYGNSFSG-----------------SVPNEIG--KLKYLQILDLS 144 (714)
Q Consensus 104 --------------------~p~~~~~l~~L~~L~L~~N~l~g-----------------~~p~~~~--~l~~L~~L~Ls 144 (714)
+|..+.++++|+.|+|++|.|+| .+|..++ ++++|+.|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88899999999999999999998 4999988 99999999999
Q ss_pred CccCCCCCCcccccccccceeecccCc-CCC-CCCcccccCcc-------ccccccccCCcccccCCC--CCCCCccccc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNN-FTG-PLPNGFGSGLV-------SLEKLNLSFNKFNGSIPS--NTGNLSSLQG 213 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~~l~-------~L~~L~l~~N~l~g~~p~--~~~~l~~L~~ 213 (714)
+|++.|.+|..|.++++|+.|+|++|+ ++| .+|..++ .+. +|+.|+|++|+|+ .+|. .++++++|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~-~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~- 576 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWT-RLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG- 576 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHH-HHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC-
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHH-hhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC-
Confidence 999999999999999999999999998 998 8998764 354 9999999999999 9999 999999999
Q ss_pred ccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCC-CCcccccCCCCC
Q 005102 214 TVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNR-GPTAFIGNPRLC 271 (714)
Q Consensus 214 ~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~-~~~~~~~n~~~~ 271 (714)
.|+|++|+++ .+| .|+.+++|+.|++++|+++ .+|........ .......++.+.
T Consensus 577 ~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~ 632 (876)
T 4ecn_A 577 LLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK 632 (876)
T ss_dssp EEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC
T ss_pred EEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC
Confidence 9999999999 888 9999999999999999999 66655433332 333334444443
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=1.1e-30 Score=307.18 Aligned_cols=216 Identities=37% Similarity=0.641 Sum_probs=191.1
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
..++.|+|++|+++|.+|..+.++++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|+|
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 46777888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCccCCCCCCcccc------------------------------------------------------------------
Q 005102 144 SQNFFNGSLPVSIV------------------------------------------------------------------ 157 (714)
Q Consensus 144 s~N~l~g~~p~~~~------------------------------------------------------------------ 157 (714)
++|+++|.+|..+.
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 88888887776543
Q ss_pred ----cccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCC
Q 005102 158 ----QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNL 233 (714)
Q Consensus 158 ----~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l 233 (714)
.+++|+.|||++|+++|.+|..++ .+++|+.|+|++|+|+|.+|..++++++|+ .|||++|+++|.+|..++.+
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~-~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~-~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLN-ILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGG-GCTTCCEEECCSSCCCSCCCGGGGGCTTCC-EEECCSSCCEECCCGGGGGC
T ss_pred hhhhccccccEEECcCCcccccCCHHHh-ccccCCEEeCcCCccCCCCChHHhCCCCCC-EEECCCCcccCcCChHHhCC
Confidence 246788899999999999999885 599999999999999999999999999999 99999999999999999999
Q ss_pred CCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCCCCCCCCCCC
Q 005102 234 PEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGPPLKNPCSSD 282 (714)
Q Consensus 234 ~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 282 (714)
++|++||+++|+|+|.+|...++..+....|.||+.+||.|+. .|...
T Consensus 704 ~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred CCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 9999999999999999999999988889999999999999876 77643
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=4.8e-31 Score=303.47 Aligned_cols=244 Identities=18% Similarity=0.310 Sum_probs=212.5
Q ss_pred chhHHHHHHHHHHhccCCCCCCC-------CCCCCCCCCCCcc---cceEec-CCcEEEEEcCCCCccccCCccccCCCC
Q 005102 21 LNGEGYALLSFKQSVHEDPEGSL-------SNWNSSDENPCSW---NGITCK-EQRVVSVSIPKKKLLGFLPSALGSLTD 89 (714)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~l-------~~w~~~~~~~c~w---~gv~c~-~~~~~~l~l~~~~l~g~~p~~~~~l~~ 89 (714)
...|+.||.++|+++.++.+..- .+|+.+ .++|.| .||+|+ .++|+.|+|+++++.|.+|++|++|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 34689999999999876655433 389864 689999 999997 469999999999999999999999999
Q ss_pred CCEEEccCCC----------------------------------------------------------------------
Q 005102 90 LRHVNLRNNK---------------------------------------------------------------------- 99 (714)
Q Consensus 90 L~~L~L~~N~---------------------------------------------------------------------- 99 (714)
|++|+|++|.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 9999999884
Q ss_pred --------CcccCChhhcCCCCCCEEEcCCCcCccc-----------------CCcccC--CCCCCCEEeccCccCCCCC
Q 005102 100 --------FFGSLPLELLEAQGLQSLVLYGNSFSGS-----------------VPNEIG--KLKYLQILDLSQNFFNGSL 152 (714)
Q Consensus 100 --------l~~~~p~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~ 152 (714)
++| +|..++++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 445 889999999999999999999986 999999 9999999999999999999
Q ss_pred CcccccccccceeecccCc-CCC-CCCcccccCc------cccccccccCCcccccCCC--CCCCCcccccccccccccC
Q 005102 153 PVSIVQCKRLKALDLSQNN-FTG-PLPNGFGSGL------VSLEKLNLSFNKFNGSIPS--NTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 153 p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~~l------~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~~l~l~~N~l 222 (714)
|..|.++++|++|+|++|+ ++| .+|..++. + ++|+.|+|++|+++ .+|. .++++++|+ .|++++|++
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~-L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~-~L~L~~N~l 342 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQA-LADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG-MLECLYNQL 342 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHH-HHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC-EEECCSCCC
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHh-hhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC-EEeCcCCcC
Confidence 9999999999999999998 998 89988753 5 89999999999999 9999 999999999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCCCCCCccccCC-CCcccccCCCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNR-GPTAFIGNPRLC 271 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~-~~~~~~~n~~~~ 271 (714)
+|.+| .++.+++|+.|++++|+++ .+|........ .......++.+.
T Consensus 343 ~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 343 EGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp EEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS
T ss_pred ccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc
Confidence 99999 9999999999999999999 56655443333 333444444443
No 257
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.1e-30 Score=294.49 Aligned_cols=185 Identities=12% Similarity=0.057 Sum_probs=129.6
Q ss_pred ccccCceEEEEEE-ECCCcEEEEEEeCCCC----------chhHHHHHHHHHHHhcc-CCCCccceEEEEEeCCceeEEE
Q 005102 411 LGKSGIGIVYKVV-LEDGHTLAVRRLGEGG----------SQRFKEFQTEVEAIGKI-RHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 411 lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 478 (714)
.+.|+.|.++.++ +-.|+.+|||++.+.. ....++|.+|+++|+++ .|+||+++++++++.+..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666544 2348999999997541 12345799999999999 7999999999999999999999
Q ss_pred eccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhh
Q 005102 479 DYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 479 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
||++|++|.++|... .+++.. +|+.||+.||+|+|+ +|||||||||+|||+++++++||+|||+|+..
T Consensus 322 Eyv~G~~L~d~i~~~------~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG------EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp ECCCSEEHHHHHHTT------CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred ecCCCCcHHHHHHhC------CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 999999999999865 345543 589999999999999 99999999999999999999999999999865
Q ss_pred hccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 559 NIAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
.... ....+..||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 390 ~~~~----------------------------~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 390 PQDC----------------------------SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C-------------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCC----------------------------ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3211 11223457999999999975 5678899999999998887766554
No 258
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.2e-25 Score=228.34 Aligned_cols=218 Identities=22% Similarity=0.241 Sum_probs=184.5
Q ss_pred CCCcccceEec-CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc
Q 005102 52 NPCSWNGITCK-EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN 130 (714)
Q Consensus 52 ~~c~w~gv~c~-~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 130 (714)
+.|.|.|+.|. ...++.+++++++++. +|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.++...+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 67999999986 3457789999999995 676554 6899999999999977777899999999999999999965556
Q ss_pred ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc
Q 005102 131 EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS 210 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 210 (714)
.|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..+ ..+++|+.|+|++|++++..+..+..+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 158 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVF-DSLTKLTYLSLGYNELQSLPKGVFDKLTS 158 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTT-TTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHh-CcCcCCCEEECCCCcCCccCHhHccCCcc
Confidence 67899999999999999997666778999999999999999996544444 57999999999999999666666899999
Q ss_pred cccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccCCCCcccccCCCCCCCC
Q 005102 211 LQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 211 L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~ 274 (714)
|+ .|++++|.+++..+..|..+++|+.|++++|++++.++.... +.......+.+|++.|.+.
T Consensus 159 L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 159 LK-ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cc-eeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 99 999999999988888899999999999999999987776543 3344456677888877653
No 259
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.1e-26 Score=260.61 Aligned_cols=188 Identities=15% Similarity=0.216 Sum_probs=144.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCc--h------hHHHHHHHHHHHhccCCCCccceEEEEEeCCceeEEEe
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS--Q------RFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 479 (714)
.++||+|+||+||+|.. .++.+|+|+...... . ..+++.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 45899999999999955 478899998654321 1 13458999999999999999977777778888899999
Q ss_pred ccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhh
Q 005102 480 YIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLAN 559 (714)
Q Consensus 480 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 559 (714)
|+++|+|.+++.. +..|+.|+++||+|||+ ++|+||||||+|||+++ ++||+|||+|+...
T Consensus 420 ~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 420 YINGKLAKDVIED--------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp CCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 9999999999853 45799999999999999 89999999999999998 99999999998754
Q ss_pred ccCCCCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCC--CCCCchhhhHHHHHHHHHHHhCCCcc
Q 005102 560 IAGGSPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKV--VKPSQKWDIYSYGVILLEMITGRTAV 636 (714)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DVwS~Gvvl~elltG~~p~ 636 (714)
.... . . ...........||+.|||||++.. ..|+..+|+||..+-..+.+.++.+|
T Consensus 481 ~~~~----------------~-~----~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDED----------------K-A----VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHH----------------H-H----HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred Cccc----------------c-c----cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2110 0 0 000001123457899999999976 55788899999999999988888776
No 260
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=7.6e-25 Score=226.27 Aligned_cols=209 Identities=19% Similarity=0.142 Sum_probs=184.0
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCc-CcccCCcccCCCCCCCEEe
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNS-FSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~ 142 (714)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. +++..|..+..+++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 478899999999999888899999999999999999998889999999999999999998 8766688999999999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++++..|..+..+++|++|+|++|++++ +|...+..+++|+.|+|++|++++..+..+..+++|+ .|++++|.+
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l 189 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD-RLLLHQNRV 189 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccc-cCHhHhccCCCccEEECCCCcccccCHHHhcCccccC-EEECCCCcc
Confidence 99999998888899999999999999999985 5544335699999999999999966666799999999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccCCCCcccccCCCCCCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~ 274 (714)
++..|..|..+++|+.|++++|++++.++.... ........+.+|+..|.++
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999999999999999999999999987765333 3334456667887777654
No 261
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.92 E-value=6.3e-25 Score=231.47 Aligned_cols=192 Identities=21% Similarity=0.239 Sum_probs=178.8
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCC--------
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGK-------- 134 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~-------- 134 (714)
..+++.|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..+..+++|++|+|++|.+.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 357899999999999 89999999999999999999999 88999999999999999999999999998765
Q ss_pred -CCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccc
Q 005102 135 -LKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQG 213 (714)
Q Consensus 135 -l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 213 (714)
+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++.+.+|..++++++|+
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~-~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~- 256 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH-HLPKLEELDLRGCTALRNYPPIFGGRAPLK- 256 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG-GCTTCCEEECTTCTTCCBCCCCTTCCCCCC-
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc-cCCCCCEEECcCCcchhhhHHHhcCCCCCC-
Confidence 999999999999998 89999999999999999999999 4777774 699999999999999999999999999999
Q ss_pred ccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCC
Q 005102 214 TVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRG 260 (714)
Q Consensus 214 ~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~ 260 (714)
.|++++|++.+.+|..++.+++|+.|++++|++.+.+|.........
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L 303 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc
Confidence 99999999999999999999999999999999999999876544433
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=2.1e-24 Score=218.53 Aligned_cols=195 Identities=22% Similarity=0.208 Sum_probs=172.8
Q ss_pred CCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcc
Q 005102 52 NPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNE 131 (714)
Q Consensus 52 ~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 131 (714)
.||.|.|++|.. ..+.+++++++++. +|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..
T Consensus 3 ~Cp~~~gC~C~~-~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 78 (251)
T 3m19_A 3 TCETVTGCTCNE-GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78 (251)
T ss_dssp -CHHHHSSEEEG-GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCCCCCceEcCC-CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhH
Confidence 356899999963 34578999999985 666665 68999999999999988889999999999999999999888888
Q ss_pred cCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccc
Q 005102 132 IGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSL 211 (714)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 211 (714)
|..+++|+.|+|++|++++..+..|..+++|++|+|++|+++ .+|...+..+++|+.|+|++|+|++..|..+..+++|
T Consensus 79 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 157 (251)
T 3m19_A 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCC
Confidence 999999999999999999777788899999999999999999 4555554679999999999999997666789999999
Q ss_pred ccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 212 QGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 212 ~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
+ .|+|++|+|++..+..|..+++|+.|++++|++++....
T Consensus 158 ~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 158 Q-TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp C-EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred C-EEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 9 999999999988888999999999999999999987443
No 263
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.91 E-value=1.3e-24 Score=226.95 Aligned_cols=200 Identities=21% Similarity=0.273 Sum_probs=154.7
Q ss_pred CCCCcccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCc--ccCChhhcCCCCCCEE
Q 005102 51 ENPCSWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFF--GSLPLELLEAQGLQSL 117 (714)
Q Consensus 51 ~~~c~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L 117 (714)
.+.|.|.+|.|+. ..++.|+|++|+++...+..|.++++|++|+|++|.++ +..|..+..+++|++|
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 3568999999973 36889999999999665566899999999999999998 3346777788888888
Q ss_pred EcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCC-cccccccccceeecccCcCCCCCCcccccCccccccccccCCc
Q 005102 118 VLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLP-VSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNK 196 (714)
Q Consensus 118 ~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~ 196 (714)
+|++|.++ .+|..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+++..|..+ ..+++|+.|+|++|+
T Consensus 84 ~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 84 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF-NGLSSLEVLKMAGNS 161 (306)
T ss_dssp ECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT-TTCTTCCEEECTTCE
T ss_pred ECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc-ccCcCCCEEECCCCc
Confidence 88888887 567777788888888888888875444 467777888888888888776555555 457778888888887
Q ss_pred ccc-cCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 197 FNG-SIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 197 l~g-~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
+++ .+|..+..+++|+ .|++++|.+++..|..+..+++|+.|++++|++++..+..
T Consensus 162 l~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 218 (306)
T 2z66_A 162 FQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 218 (306)
T ss_dssp EGGGEECSCCTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGG
T ss_pred cccccchhHHhhCcCCC-EEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhh
Confidence 775 5677777777777 7788888877777777777777888888888777665544
No 264
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.91 E-value=9.7e-24 Score=232.86 Aligned_cols=216 Identities=21% Similarity=0.195 Sum_probs=172.9
Q ss_pred ccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcC
Q 005102 56 WNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSF 124 (714)
Q Consensus 56 w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 124 (714)
|..|.|.. ..++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56788862 3688999999999999999999999999999999999998889999999999999999999
Q ss_pred cccCCcccCCCCCCCEEeccCccCCCCCCcccc-------------------------cccccceeecccCcCCCCCCcc
Q 005102 125 SGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIV-------------------------QCKRLKALDLSQNNFTGPLPNG 179 (714)
Q Consensus 125 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-------------------------~l~~L~~L~l~~N~l~g~~p~~ 179 (714)
++..+..|..+++|+.|+|++|++++..+..|. .+++|+.|+|++|+++ .+|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~- 213 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN- 213 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCC-
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-cccc-
Confidence 977777799999999999999999854443444 4455556666666665 3343
Q ss_pred cccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccC
Q 005102 180 FGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMN 258 (714)
Q Consensus 180 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~ 258 (714)
+ ..+++|+.|+|++|+|++..|..+.++++|+ .|++++|++++..|..|..+++|+.|++++|+|++.++.... +..
T Consensus 214 ~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 214 L-TPLVGLEELEMSGNHFPEIRPGSFHGLSSLK-KLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp C-TTCTTCCEEECTTSCCSEECGGGGTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred c-cccccccEEECcCCcCcccCcccccCccCCC-EEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 3 3467778888888888877788888888888 888888888888888888889999999999999877776544 333
Q ss_pred CCCcccccCCCCCCCCC
Q 005102 259 RGPTAFIGNPRLCGPPL 275 (714)
Q Consensus 259 ~~~~~~~~n~~~~~~~~ 275 (714)
.....+.+|++.|.+.+
T Consensus 292 L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 292 LVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCEEECCSSCEECSTTT
T ss_pred CCEEEccCCCcCCCCCc
Confidence 44566778888887753
No 265
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.90 E-value=1.7e-24 Score=226.69 Aligned_cols=183 Identities=23% Similarity=0.409 Sum_probs=142.5
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCC-CCCEEe
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLK-YLQILD 142 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~ 142 (714)
.+++.|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+..+++|++|+|++|+++|.+|..++.++ +|+.|+
T Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180 (313)
T ss_dssp TTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEE
T ss_pred CCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEE
Confidence 4667777777777777777777777777777777777777777777777777777777777777777777776 777777
Q ss_pred ccCccCCCCCCcccc-----------------------cccccceeecccCcCCCCCCcccccCccccccccccCCcccc
Q 005102 143 LSQNFFNGSLPVSIV-----------------------QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~-----------------------~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g 199 (714)
|++|++++.+|..+. .+++|+.|+|++|++++.+|. + ..+++|+.|+|++|++++
T Consensus 181 L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~-~~l~~L~~L~Ls~N~l~~ 258 (313)
T 1ogq_A 181 ISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-V-GLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp CCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-C-CCCTTCCEEECCSSCCEE
T ss_pred CcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-c-cccCCCCEEECcCCcccC
Confidence 777776665555554 445555555555555544443 3 357899999999999999
Q ss_pred cCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCc-CCCCC
Q 005102 200 SIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNN-LSGPI 250 (714)
Q Consensus 200 ~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~-l~~~~ 250 (714)
.+|..+.++++|+ .|++++|+++|.+|.. +.+++|+.|++++|+ +.|.+
T Consensus 259 ~~p~~l~~l~~L~-~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 259 TLPQGLTQLKFLH-SLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CCCGGGGGCTTCC-EEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTT
T ss_pred cCChHHhcCcCCC-EEECcCCcccccCCCC-ccccccChHHhcCCCCccCCC
Confidence 9999999999999 9999999999999987 899999999999998 77753
No 266
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.90 E-value=2.4e-23 Score=228.87 Aligned_cols=216 Identities=19% Similarity=0.200 Sum_probs=169.7
Q ss_pred ccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcC
Q 005102 56 WNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSF 124 (714)
Q Consensus 56 w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 124 (714)
|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 66888863 3577899999999998889999999999999999999988888889999999999999999
Q ss_pred cccCCcccCCCCCCCEEeccCccCCCCCCcccc-------------------------cccccceeecccCcCCCCCCcc
Q 005102 125 SGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIV-------------------------QCKRLKALDLSQNNFTGPLPNG 179 (714)
Q Consensus 125 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-------------------------~l~~L~~L~l~~N~l~g~~p~~ 179 (714)
++..+..|..+++|+.|+|++|+++...+..|. ++++|+.|+|++|+++ .+|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~- 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN- 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-
Confidence 866666788888999999988888754443444 4555555555556555 4443
Q ss_pred cccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccC
Q 005102 180 FGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMN 258 (714)
Q Consensus 180 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~ 258 (714)
+ ..+++|+.|+|++|++++..|..|.++++|+ .|++++|++++..|..|..+++|+.|++++|+|++.++.... +..
T Consensus 203 ~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 203 L-TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ-KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp C-TTCSSCCEEECTTSCCCEECTTTTTTCTTCC-EEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred c-CCCcccCEEECCCCccCccChhhhccCccCC-EEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 2 3467788888888888877788888888888 888888888888888888999999999999999987776544 334
Q ss_pred CCCcccccCCCCCCCCC
Q 005102 259 RGPTAFIGNPRLCGPPL 275 (714)
Q Consensus 259 ~~~~~~~~n~~~~~~~~ 275 (714)
.....+.+|++.|++.+
T Consensus 281 L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 281 LERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCEEECCSSCEECSSTT
T ss_pred CCEEEcCCCCccCCCCc
Confidence 45566778999897753
No 267
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=3.2e-23 Score=212.23 Aligned_cols=204 Identities=21% Similarity=0.258 Sum_probs=177.8
Q ss_pred CCCCCCCCCC--cccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCC
Q 005102 45 NWNSSDENPC--SWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEA 111 (714)
Q Consensus 45 ~w~~~~~~~c--~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 111 (714)
.|.+. .+.| .|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.++...+..|..+
T Consensus 6 ~~~~~-~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l 84 (270)
T 2o6q_A 6 KKDGG-VCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL 84 (270)
T ss_dssp GGGTC-SBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSC
T ss_pred CCCCC-CCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCC
Confidence 56543 2334 477899962 257889999999999888899999999999999999996666667889
Q ss_pred CCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCcccccccc
Q 005102 112 QGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLN 191 (714)
Q Consensus 112 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~ 191 (714)
++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+++ .+|...+..+++|+.|+
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELR 163 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCcccceeE
Confidence 99999999999999777778899999999999999999877788999999999999999998 45655446799999999
Q ss_pred ccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCC
Q 005102 192 LSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 192 l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
|++|++++..+..+.++++|+ .|++++|++++..+..|..+++|+.|++++|.+....+
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELK-TLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ecCCcCcEeChhHhccCCCcC-EEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 999999976667799999999 99999999998777789999999999999999987654
No 268
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=2.4e-23 Score=214.00 Aligned_cols=208 Identities=21% Similarity=0.184 Sum_probs=178.6
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
.++.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 68899999999999888899999999999999999998888889999999999999999998888999999999999999
Q ss_pred CccCCCCCCcccccccccceeecccCcCCC-CCCcccccCccccccccccCCcccccCCCCCCCCccccc---ccccccc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTG-PLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQG---TVDFSHN 220 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~---~l~l~~N 220 (714)
+|++++..+..+..+++|++|+|++|.+++ .+|..+. .+++|+.|+|++|++++..+..+..+.+++. .+++++|
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS-NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG-GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhc-cCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 999997777789999999999999999986 4688774 6999999999999999777777776666652 5789999
Q ss_pred cCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccCCCCcccccCCCCCCCC
Q 005102 221 LFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~ 274 (714)
.+++..+..+.. .+|+.|++++|++++.++.... ........+.+|+..|.++
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999766655554 4899999999999988776543 3444556677888887664
No 269
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.89 E-value=2.4e-23 Score=229.91 Aligned_cols=157 Identities=21% Similarity=0.250 Sum_probs=134.3
Q ss_pred CCCcccc--eEecC----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccC-ChhhcCCCCCCEEE
Q 005102 52 NPCSWNG--ITCKE----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSL-PLELLEAQGLQSLV 118 (714)
Q Consensus 52 ~~c~w~g--v~c~~----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 118 (714)
..|.|.+ |.|.. .+++.|+|++|++++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3465555 88863 36899999999999999999999999999999999998666 56688999999999
Q ss_pred cCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcc--cccccccceeecccCcCCCCCCcccccCccccccccccCCc
Q 005102 119 LYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVS--IVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNK 196 (714)
Q Consensus 119 L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~ 196 (714)
|++|.+++..|..|+++++|++|+|++|++++.+|.. |..+++|++|+|++|++++..|..++..+++|+.|+|++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999998766655 88999999999999999987787755678999999999999
Q ss_pred ccccCCCCCCCC
Q 005102 197 FNGSIPSNTGNL 208 (714)
Q Consensus 197 l~g~~p~~~~~l 208 (714)
+++..|..+.++
T Consensus 166 l~~~~~~~l~~l 177 (455)
T 3v47_A 166 VKSICEEDLLNF 177 (455)
T ss_dssp BSCCCTTTSGGG
T ss_pred ccccChhhhhcc
Confidence 988777766543
No 270
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=7.6e-23 Score=211.51 Aligned_cols=203 Identities=24% Similarity=0.222 Sum_probs=167.8
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
..++.+++++++++. +|..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++. |.. +.+++|+.|+|
T Consensus 10 ~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~L 84 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDL 84 (290)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEEC
T ss_pred CCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEEC
Confidence 467788888888885 565554 6899999999999988888899999999999999999854 433 78999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|+++ .+|..+..+++|++|+|++|++++..|..+ ..+++|+.|+|++|+|++..+..+..+++|+ .|+|++|+|+
T Consensus 85 s~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~ 161 (290)
T 1p9a_G 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGAL-RGLGELQELYLKGNELKTLPPGLLTPTPKLE-KLSLANNNLT 161 (290)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTT-TTCTTCCEEECTTSCCCCCCTTTTTTCTTCC-EEECTTSCCS
T ss_pred CCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHH-cCCCCCCEEECCCCCCCccChhhcccccCCC-EEECCCCcCC
Confidence 999998 788888999999999999999985444444 5799999999999999976667778899999 9999999999
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~ 274 (714)
+..+..|..+++|+.|++++|+|+..++............+.+|++.|.+.
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred ccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 776777889999999999999999666555555555556677888888653
No 271
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=223.96 Aligned_cols=194 Identities=19% Similarity=0.211 Sum_probs=153.1
Q ss_pred CCCCcccceEec-------------CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEE
Q 005102 51 ENPCSWNGITCK-------------EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSL 117 (714)
Q Consensus 51 ~~~c~w~gv~c~-------------~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 117 (714)
.++|.|.|+ |+ ..+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 366889887 64 1378999999999999877799999999999999999998888899999999999
Q ss_pred EcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCc--ccccccccceeecccCc-CCCCCCcccccCccccccccccC
Q 005102 118 VLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPV--SIVQCKRLKALDLSQNN-FTGPLPNGFGSGLVSLEKLNLSF 194 (714)
Q Consensus 118 ~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~-l~g~~p~~~~~~l~~L~~L~l~~ 194 (714)
+|++|.+++..+..++++++|++|+|++|+++ .+|. .+..+++|++|++++|+ ++ .++...+.++++|+.|++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCC
Confidence 99999999544455999999999999999998 5555 78899999999999995 55 45443335799999999999
Q ss_pred CcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 195 NKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 195 N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
|++++..|..+.++++|+ .|++++|.++...+..+..+++|+.|++++|++++
T Consensus 184 n~l~~~~~~~l~~l~~L~-~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVS-HLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp TTCCEECTTTTTTCSEEE-EEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTT
T ss_pred CCcCccCHHHHhccccCC-eecCCCCccccchhhhhhhcccccEEECCCCcccc
Confidence 999988899999888777 77777766642222222234444444444444443
No 272
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.89 E-value=7.4e-23 Score=211.30 Aligned_cols=188 Identities=21% Similarity=0.180 Sum_probs=171.3
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCC-CcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEE
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNK-FFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQIL 141 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 141 (714)
..+++.|+|++|.+++..|..|..+++|++|+|++|. +....|..+..+++|+.|+|++|.+++..|..+.++++|+.|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3589999999999999999999999999999999998 776668889999999999999999998889999999999999
Q ss_pred eccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccccccccccc
Q 005102 142 DLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNL 221 (714)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~ 221 (714)
+|++|++++..+..|..+++|+.|+|++|++++ +|...+..+++|+.|+|++|++++..|..+.++++|+ .|++++|.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM-TLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccc-cCHHHhcCccccCEEECCCCcccccCHhHccCccccc-EeeCCCCc
Confidence 999999997666779999999999999999984 5554335699999999999999998899999999999 99999999
Q ss_pred CCcCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 222 FSGSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 222 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
+++..+..+..+++|+.|++++|++....+.
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred CCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 9987778899999999999999999876543
No 273
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.89 E-value=4.7e-22 Score=209.91 Aligned_cols=192 Identities=19% Similarity=0.272 Sum_probs=132.5
Q ss_pred CCCcccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcC
Q 005102 52 NPCSWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLY 120 (714)
Q Consensus 52 ~~c~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 120 (714)
+.|.|+.+.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 446899999962 367889999999999888899999999999999999998889999999999999999
Q ss_pred CCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCC--CCCcccccCccccccccccCCccc
Q 005102 121 GNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG--PLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 121 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
+|.++ .+|..+. ++|+.|++++|++++..+..|.++++|+.|++++|.++. ..+..+ ..+++|+.|++++|+++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF-QGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG-GGCTTCCEEECCSSCCC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhc-cCCCCcCEEECCCCccc
Confidence 99998 6676554 567777777777765555556666666666666666642 333333 33555555555555555
Q ss_pred ccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCC
Q 005102 199 GSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 199 g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
.+|..+. ++|+ .|++++|.+++..|..|..+++|+.|++++|++++..+
T Consensus 185 -~l~~~~~--~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 233 (330)
T 1xku_A 185 -TIPQGLP--PSLT-ELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN 233 (330)
T ss_dssp -SCCSSCC--TTCS-EEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECT
T ss_pred -cCCcccc--ccCC-EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeCh
Confidence 3444332 4444 55555555555555555555555555555555555444
No 274
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.89 E-value=3.7e-22 Score=210.86 Aligned_cols=192 Identities=18% Similarity=0.246 Sum_probs=146.4
Q ss_pred CCcccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCC
Q 005102 53 PCSWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYG 121 (714)
Q Consensus 53 ~c~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 121 (714)
.|.|+.+.|.. ..++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 47899999962 3688999999999998888999999999999999999998899999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCC--CCCCcccccCccccccccccCCcccc
Q 005102 122 NSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFT--GPLPNGFGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 122 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~--g~~p~~~~~~l~~L~~L~l~~N~l~g 199 (714)
|.++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..+ ..+ +|+.|++++|+++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~l-~L~~L~l~~n~l~- 185 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF-DGL-KLNYLRISEAKLT- 185 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSS-CSC-CCSCCBCCSSBCS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccc-cCC-ccCEEECcCCCCC-
Confidence 9998 7777665 78999999999998655566888889999999998885 2445544 334 6666666666666
Q ss_pred cCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 200 SIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 200 ~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
.+|..+. ++|+ .|++++|.+++..|..+..+++|+.|++++|++++..|..
T Consensus 186 ~l~~~~~--~~L~-~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 236 (332)
T 2ft3_A 186 GIPKDLP--ETLN-ELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS 236 (332)
T ss_dssp SCCSSSC--SSCS-CCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG
T ss_pred ccCcccc--CCCC-EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH
Confidence 3554443 4555 6666666666555556666666666666666666555543
No 275
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=1.2e-23 Score=216.29 Aligned_cols=128 Identities=16% Similarity=0.219 Sum_probs=106.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCc------------------hhHHHHHHHHHHHhccCCCCccceEEEEEe
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS------------------QRFKEFQTEVEAIGKIRHSNIVTLRAYYWS 470 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 470 (714)
+.||+|+||.||+|.+.+|+.||||.++.... .....+.+|++++++++ | +++.+++.
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~- 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA- 171 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE-
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe-
Confidence 68999999999999997799999999975321 13457899999999999 4 66666543
Q ss_pred CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEc
Q 005102 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVS 550 (714)
Q Consensus 471 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 550 (714)
.+..++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+|||++ ++.+||+
T Consensus 172 ~~~~~lvmE~~~g~~L~~-l~~------------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 WEGNAVLMELIDAKELYR-VRV------------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp EETTEEEEECCCCEEGGG-CCC------------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEEC
T ss_pred ccceEEEEEecCCCcHHH-cch------------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEE
Confidence 356799999999999998 421 1245799999999999999 8999999999999999 9999999
Q ss_pred ccchhhh
Q 005102 551 DFGLARL 557 (714)
Q Consensus 551 DFGla~~ 557 (714)
|||+|+.
T Consensus 235 DFG~a~~ 241 (282)
T 1zar_A 235 DFPQSVE 241 (282)
T ss_dssp CCTTCEE
T ss_pred ECCCCeE
Confidence 9999874
No 276
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.88 E-value=1.6e-23 Score=219.34 Aligned_cols=184 Identities=23% Similarity=0.297 Sum_probs=152.7
Q ss_pred CCcEEEEEcCCCCccccCCccc--cCCCCCCEEEccCCCCcccCChhhcCC-----CCCCEEEcCCCcCcccCCcccCCC
Q 005102 63 EQRVVSVSIPKKKLLGFLPSAL--GSLTDLRHVNLRNNKFFGSLPLELLEA-----QGLQSLVLYGNSFSGSVPNEIGKL 135 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l 135 (714)
..+++.|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 3478889999999999888877 8899999999999999877 7777776 899999999999998888899999
Q ss_pred CCCCEEeccCccCCCC--CCccc--ccccccceeecccCcCCC--CCCcccccCccccccccccCCcccccCC-CCCCCC
Q 005102 136 KYLQILDLSQNFFNGS--LPVSI--VQCKRLKALDLSQNNFTG--PLPNGFGSGLVSLEKLNLSFNKFNGSIP-SNTGNL 208 (714)
Q Consensus 136 ~~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~g--~~p~~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l 208 (714)
++|+.|+|++|++.|. +|..+ ..+++|++|+|++|++++ .++..++..+++|+.|+|++|++++.+| ..+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 9999999999998765 34444 788999999999999873 3344444567899999999999998775 556678
Q ss_pred cccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 209 SSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 209 ~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
++|+ .|++++|+|+ .+|..+. ++|+.|++++|++++. |.
T Consensus 253 ~~L~-~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~ 291 (312)
T 1wwl_A 253 SQLN-SLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS 291 (312)
T ss_dssp TTCC-EEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC
T ss_pred CCCC-EEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh
Confidence 8888 9999999998 7887776 8899999999999987 44
No 277
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1e-22 Score=204.50 Aligned_cols=184 Identities=14% Similarity=0.203 Sum_probs=163.5
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCC-CcccCChhhcCCCCCCEEEcCC-CcCcccCCcccCCCCCCCEE
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNK-FFGSLPLELLEAQGLQSLVLYG-NSFSGSVPNEIGKLKYLQIL 141 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L 141 (714)
..++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |.+++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999999888899999999999999997 8877777899999999999999 99997777889999999999
Q ss_pred eccCccCCCCCCcccccccccc---eeecccC-cCCCCCCcccccCccccc-cccccCCcccccCCCCCCCCcccccccc
Q 005102 142 DLSQNFFNGSLPVSIVQCKRLK---ALDLSQN-NFTGPLPNGFGSGLVSLE-KLNLSFNKFNGSIPSNTGNLSSLQGTVD 216 (714)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~---~L~l~~N-~l~g~~p~~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~~l~ 216 (714)
+|++|++++ +|. +..+++|+ .|++++| +++ .+|...+.++++|+ .|++++|+++ .+|......++|+ .++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~-~L~ 185 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLD-AVY 185 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEE-EEE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCC-EEE
Confidence 999999995 776 88888888 9999999 887 45655446799999 9999999999 7777665558898 999
Q ss_pred ccccc-CCcCcCccccCC-CCcccccCcCCcCCCCCCC
Q 005102 217 FSHNL-FSGSIPASLGNL-PEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 217 l~~N~-l~g~~p~~~~~l-~~L~~l~l~~N~l~~~~p~ 252 (714)
+++|+ +++..+..|..+ ++|+.|++++|++++.++.
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~ 223 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK 223 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh
Confidence 99995 997777889999 9999999999999976655
No 278
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.5e-22 Score=198.76 Aligned_cols=183 Identities=23% Similarity=0.267 Sum_probs=146.1
Q ss_pred CCCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc
Q 005102 51 ENPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN 130 (714)
Q Consensus 51 ~~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 130 (714)
.+.|.|.+|.|... +++ .+|..+ .++|++|+|++|++++..+..+..+++|+.|+|++|++++..+.
T Consensus 4 ~C~C~~~~v~c~~~----------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 4 RCSCSGTTVECYSQ----------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp TCEEETTEEECCSS----------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CCEECCCEEEecCC----------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 35688999999743 333 234333 45889999999999876666788899999999999999866666
Q ss_pred ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc
Q 005102 131 EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS 210 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 210 (714)
.|..+++|++|+|++|++++..+..|..+++|++|+|++|++++ +|...+..+++|+.|+|++|++++..+..+..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcc-cCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 78889999999999999986666667889999999999999985 44444356889999999999998666666888899
Q ss_pred cccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc
Q 005102 211 LQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 211 L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 255 (714)
|+ .+++++|.+.+ .+++|++|+++.|+++|.+|....
T Consensus 150 L~-~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 150 LQ-YIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CC-EEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred cc-EEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCc
Confidence 98 99999998874 456788999999999999987644
No 279
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.88 E-value=1.4e-22 Score=223.84 Aligned_cols=190 Identities=21% Similarity=0.275 Sum_probs=119.4
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChh--hcCCCCCCEEEcCCCcCcccCCcc-cCCCCCCCE
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLE--LLEAQGLQSLVLYGNSFSGSVPNE-IGKLKYLQI 140 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~ 140 (714)
.+++.|+|++|++++..|..|+++++|++|+|++|.+++.+|.. +..+++|++|+|++|.+++..|.. +.++++|+.
T Consensus 79 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 158 (455)
T 3v47_A 79 SSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHV 158 (455)
T ss_dssp TTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCE
T ss_pred ccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccE
Confidence 46777777777777777777777777777777777777655444 666777777777777777665655 666677777
Q ss_pred EeccCccCCCCCCcccccc-------------------------------------------------------------
Q 005102 141 LDLSQNFFNGSLPVSIVQC------------------------------------------------------------- 159 (714)
Q Consensus 141 L~Ls~N~l~g~~p~~~~~l------------------------------------------------------------- 159 (714)
|+|++|++++..|..+..+
T Consensus 159 L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 238 (455)
T 3v47_A 159 LDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAG 238 (455)
T ss_dssp EECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTT
T ss_pred EeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccc
Confidence 7777776665555443322
Q ss_pred ------------------------------------cccceeecccCcCCCCCCcccccCccccccccccCCcccccCCC
Q 005102 160 ------------------------------------KRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203 (714)
Q Consensus 160 ------------------------------------~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~ 203 (714)
++|+.|+|++|++++.+|..+ ..+++|+.|+|++|++++..|.
T Consensus 239 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~ 317 (455)
T 3v47_A 239 TKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVF-SHFTDLEQLTLAQNEINKIDDN 317 (455)
T ss_dssp CCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTT-TTCTTCCEEECTTSCCCEECTT
T ss_pred cceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhc-ccCCCCCEEECCCCcccccChh
Confidence 133444444444444344444 3466666666666666666666
Q ss_pred CCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc
Q 005102 204 NTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 204 ~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 255 (714)
.+.++++|+ .|++++|.+++..|..|+.+++|+.|++++|++++.+|....
T Consensus 318 ~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 368 (455)
T 3v47_A 318 AFWGLTHLL-KLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368 (455)
T ss_dssp TTTTCTTCC-EEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred HhcCcccCC-EEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc
Confidence 666666666 666666666655566666666666666666666666555443
No 280
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=8e-22 Score=202.08 Aligned_cols=183 Identities=22% Similarity=0.282 Sum_probs=143.3
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|++.+|.++.. +.+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..|..++++++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 4677788888877642 357788888888888888875 3 36778888888888888888777777788888888888
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|++++..|..|..+++|++|+|++|++++ +|...+..+++|+.|+|++|++++..|..+.++++|+ .|++++|+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~ 194 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK-DLRLYQNQLK 194 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCS
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCc-cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCC-EEECCCCcCC
Confidence 8888886666667888888888888888874 4444334678888888888888866666678888888 8888888888
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
+..|..++.+++|+.|++++|.+.+..|.
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 87777788888888888888888877764
No 281
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=2.2e-22 Score=229.87 Aligned_cols=132 Identities=20% Similarity=0.200 Sum_probs=70.5
Q ss_pred EEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccC
Q 005102 66 VVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQ 145 (714)
Q Consensus 66 ~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 145 (714)
+..+++.+|.+.+..+..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..|..|+++++|+.|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 34455555555554444455555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 146 NFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
|.|++..+..|.++++|++|+|++|.+++..|..+ ..+++|+.|+|++|+++
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF-QATTSLQNLQLSSNRLT 184 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT-TTCTTCCEEECTTSCCS
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh-hcCCcCcEEECcCCCCC
Confidence 55553333334555555555555555554444333 23555555555555554
No 282
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.87 E-value=3.5e-22 Score=222.02 Aligned_cols=197 Identities=19% Similarity=0.181 Sum_probs=176.3
Q ss_pred cccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCc
Q 005102 55 SWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNS 123 (714)
Q Consensus 55 ~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 123 (714)
.|..|.|.. ..++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 377899962 367789999999999999999999999999999999999889999999999999999999
Q ss_pred CcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCC
Q 005102 124 FSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203 (714)
Q Consensus 124 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~ 203 (714)
+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|.+++..|..+ .++++|+.|+|++|++++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF-SGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSS-TTCTTCCEEEEESCCCSSCCHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhc-cCCCCCCEEECCCCcCcccChh
Confidence 996666678999999999999999998889999999999999999999987666666 5699999999999999966666
Q ss_pred CCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 204 NTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 204 ~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
.+.++++|+ .|++++|.+++..+..|..+++|+.|++++|++.+.+|..
T Consensus 171 ~l~~l~~L~-~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 171 ALSHLHGLI-VLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp HHTTCTTCC-EEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT
T ss_pred HhcccCCCc-EEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc
Confidence 788999999 9999999999888889999999999999999887776654
No 283
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=7.5e-23 Score=235.21 Aligned_cols=187 Identities=25% Similarity=0.380 Sum_probs=174.6
Q ss_pred CCcEEEEEcCCCCcccc-----------------CCcccc--CCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCc
Q 005102 63 EQRVVSVSIPKKKLLGF-----------------LPSALG--SLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNS 123 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 123 (714)
..+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.|.+|..+.++++|+.|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 56899999999999996 999999 99999999999999999999999999999999999999
Q ss_pred -Ccc-cCCcccCCC------CCCCEEeccCccCCCCCCc--ccccccccceeecccCcCCCCCCcccccCcccccccccc
Q 005102 124 -FSG-SVPNEIGKL------KYLQILDLSQNFFNGSLPV--SIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLS 193 (714)
Q Consensus 124 -l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~ 193 (714)
++| .+|..++++ ++|+.|+|++|+++ .+|. .+.++++|+.|+|++|+++|.+| .+ ..+++|+.|+|+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~-~~l~~L~~L~L~ 361 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF-GSEIKLASLNLA 361 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC-EEEEEESEEECC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh-CCCCCCCEEECC
Confidence 999 899998887 99999999999999 8998 99999999999999999999999 66 469999999999
Q ss_pred CCcccccCCCCCCCCcc-cccccccccccCCcCcCccccCCC--CcccccCcCCcCCCCCCCCcc
Q 005102 194 FNKFNGSIPSNTGNLSS-LQGTVDFSHNLFSGSIPASLGNLP--EKVYIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 194 ~N~l~g~~p~~~~~l~~-L~~~l~l~~N~l~g~~p~~~~~l~--~L~~l~l~~N~l~~~~p~~~~ 255 (714)
+|+++ .+|..+.++++ |+ .|++++|.++ .+|..+..++ +|+.|++++|++++.+|....
T Consensus 362 ~N~l~-~lp~~l~~l~~~L~-~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 362 YNQIT-EIPANFCGFTEQVE-NLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp SSEEE-ECCTTSEEECTTCC-EEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred CCccc-cccHhhhhhcccCc-EEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 99999 99999999999 99 9999999999 8898888765 899999999999998887544
No 284
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.87 E-value=2.2e-22 Score=230.71 Aligned_cols=209 Identities=17% Similarity=0.125 Sum_probs=182.0
Q ss_pred CcEEEEEcCCCCcccc--CCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC-cccCCCCCCCE
Q 005102 64 QRVVSVSIPKKKLLGF--LPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-NEIGKLKYLQI 140 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~ 140 (714)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++ +|..+..+++|+.|+|++|.+++..| ..+.++++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4788899999999887 48889999999999999999885 66888999999999999999998877 68999999999
Q ss_pred EeccCccCCCCCCcccccccccceeecccCcCCCC-CCcccccCccccccccccCCcccccCCCCCCCCccccccccccc
Q 005102 141 LDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGP-LPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSH 219 (714)
Q Consensus 141 L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~ 219 (714)
|+|++|++++..|..+..+++|+.|+|++|++++. +|..+ ..+++|+.|+|++|++++.+|..+.++++|+ .|++++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~ 506 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF-ANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ-LLNMSH 506 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC-TTCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEECCS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhh-ccCCCCCEEECCCCcCCccChhhhcccccCC-EEECCC
Confidence 99999999998999999999999999999999974 56666 5699999999999999999999999999999 999999
Q ss_pred ccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcccc-CCCCcccccCCCCCCCCC
Q 005102 220 NLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALM-NRGPTAFIGNPRLCGPPL 275 (714)
Q Consensus 220 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~~~~~~~ 275 (714)
|++++.+|..|+.+++|+.|++++|+++..++....+. ......+.+|+..|.++.
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999999999999999999995544423332 245567789998887764
No 285
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.87 E-value=1.4e-21 Score=201.94 Aligned_cols=180 Identities=22% Similarity=0.169 Sum_probs=161.9
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
..++.|+|++|++++..|..|.++++|++|+|++|.|++..+. ..+++|++|+|++|+++ .+|..+..+++|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4788999999999999999999999999999999999965433 78999999999999998 88999999999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|+|++..|..|..+++|+.|+|++|+++ .+|...+..+++|+.|+|++|+|++..+..+..+++|+ .|++++|+|+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~-~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD-TLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCC-EEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCC-ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCC-EEECCCCcCC
Confidence 999999777788999999999999999999 45655556799999999999999955555678899999 9999999999
Q ss_pred cCcCccccCCCCcccccCcCCcCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
.+|..+..+++|+.|++++|.+...
T Consensus 186 -~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred -ccChhhcccccCCeEEeCCCCccCc
Confidence 7888888999999999999999753
No 286
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=9.4e-23 Score=226.56 Aligned_cols=202 Identities=20% Similarity=0.171 Sum_probs=141.3
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc--------------
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN-------------- 130 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~-------------- 130 (714)
+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 67778888888887777777888888888888888776555 67777777777777776643211
Q ss_pred --ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCC
Q 005102 131 --EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNL 208 (714)
Q Consensus 131 --~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l 208 (714)
....+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++.+|..+...+++|+.|+|++|.|++. |. ...+
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l 190 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVF 190 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCC
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccC
Confidence 0123567778888888887777777788888888888888888777776654577888888888888755 32 3347
Q ss_pred cccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCC
Q 005102 209 SSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCG 272 (714)
Q Consensus 209 ~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~ 272 (714)
++|+ .|+|++|.|++. |..+..+++|+.|++++|+|++.++....+.......+.+|+..|+
T Consensus 191 ~~L~-~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 191 AKLK-TLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TTCC-EEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCC-EEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 7777 888888888864 4457788888888888888887544333333444455556666554
No 287
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.87 E-value=1.8e-22 Score=228.58 Aligned_cols=194 Identities=16% Similarity=0.185 Sum_probs=173.4
Q ss_pred CCcccceEecC-------------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEc
Q 005102 53 PCSWNGITCKE-------------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVL 119 (714)
Q Consensus 53 ~c~w~gv~c~~-------------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 119 (714)
.|.|.|| |+. ..++.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4888888 752 37999999999999999999999999999999999999988899999999999999
Q ss_pred CCCcCcccCCcccCCCCCCCEEeccCccCCC-CCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 120 YGNSFSGSVPNEIGKLKYLQILDLSQNFFNG-SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 120 ~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
++|.+++..|..|+++++|++|+|++|++++ .+|..+.++++|++|++++|.+.+.+|...+.++++|+.|++++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998777779999999999999999986 467889999999999999999767787544467999999999999999
Q ss_pred ccCCCCCCCCcccccccccccccCCcCcCcc-ccCCCCcccccCcCCcCCCC
Q 005102 199 GSIPSNTGNLSSLQGTVDFSHNLFSGSIPAS-LGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 199 g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~-~~~l~~L~~l~l~~N~l~~~ 249 (714)
+.+|..++++++|+ .++++.|.+. .+|.. +..+++|++|++++|++++.
T Consensus 162 ~~~~~~l~~l~~L~-~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 162 NYQSQSLKSIRDIH-HLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp EECTTTTTTCSEEE-EEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred ccChhhhhccccCc-eEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 99999999999999 9999999987 44544 46799999999999999985
No 288
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.87 E-value=4.4e-22 Score=236.45 Aligned_cols=210 Identities=21% Similarity=0.174 Sum_probs=119.1
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
.++.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++..|..|..+++|+.|+|+
T Consensus 267 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 346 (844)
T 3j0a_A 267 SVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQ 346 (844)
T ss_dssp CCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECC
T ss_pred CccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECC
Confidence 45666666666666666666666666666666666666556666666666666666666665556666666666666666
Q ss_pred CccCCCCCCcccccccccceeecccCcCCC--------------------------------------------------
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTG-------------------------------------------------- 174 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-------------------------------------------------- 174 (714)
+|++++..+..|..+++|+.|+|++|.+++
T Consensus 347 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~ 426 (844)
T 3j0a_A 347 KNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVP 426 (844)
T ss_dssp SCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCT
T ss_pred CCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCC
Confidence 666654444455555555555555555442
Q ss_pred --------------CCCcccccCccccccccccCCccc-----ccCCCCCCCCcccccccccccccCCcCcCccccCCCC
Q 005102 175 --------------PLPNGFGSGLVSLEKLNLSFNKFN-----GSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPE 235 (714)
Q Consensus 175 --------------~~p~~~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~ 235 (714)
..+......+++|+.|+|++|.++ +..|..+..+++|+ .|+|++|+|++..|..|..+++
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ-VLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEE-CCCCCHHHHTTCCTTSSSSCCS
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccccc-EEECCCCcccccChhHccchhh
Confidence 111111112233333344444333 22234455666666 6666666666666666666666
Q ss_pred cccccCcCCcCCCCCCCCcc--------------------ccCCCCcccccCCCCCCCCC
Q 005102 236 KVYIDLTYNNLSGPIPQNGA--------------------LMNRGPTAFIGNPRLCGPPL 275 (714)
Q Consensus 236 L~~l~l~~N~l~~~~p~~~~--------------------~~~~~~~~~~~n~~~~~~~~ 275 (714)
|+.|++++|+|++.+|.... +.......+.+|++.|.++.
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 66666666666655443321 12333456678999997764
No 289
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=1e-21 Score=201.32 Aligned_cols=182 Identities=24% Similarity=0.233 Sum_probs=163.2
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|.+++. +.+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..|+.+++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46899999999999983 4899999999999999999988888889999999999999999988888899999999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++++..|..+..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|++++..|..+.++++|+ .+++++|.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~N~~ 217 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVF-DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ-YIWLHDNPW 217 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-TTCTTCCEEECCSSCCSCCCTTTTTTCTTCC-EEECCSSCB
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHh-cCCccCCEEECCCCcCCccCHHHHhCCcCCC-EEEccCCCc
Confidence 99999997777778999999999999999995444444 5699999999999999988888889999999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCCCCCCcc
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 255 (714)
++. +++|++|++..|+++|.+|....
T Consensus 218 ~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 218 DCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred ccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 854 55799999999999999997643
No 290
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=2.2e-22 Score=235.93 Aligned_cols=186 Identities=19% Similarity=0.237 Sum_probs=164.5
Q ss_pred CCccccCCCCCCEEEccCCCCcc-----------------cCChhhc--CCCCCCEEEcCCCcCcccCCcccCCCCCCCE
Q 005102 80 LPSALGSLTDLRHVNLRNNKFFG-----------------SLPLELL--EAQGLQSLVLYGNSFSGSVPNEIGKLKYLQI 140 (714)
Q Consensus 80 ~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 140 (714)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|+.|+|++|.+.|.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 89999999999999999999998 4999987 9999999999999999999999999999999
Q ss_pred EeccCcc-CCC-CCCccccccc-------ccceeecccCcCCCCCCc--ccccCccccccccccCCcccccCCCCCCCCc
Q 005102 141 LDLSQNF-FNG-SLPVSIVQCK-------RLKALDLSQNNFTGPLPN--GFGSGLVSLEKLNLSFNKFNGSIPSNTGNLS 209 (714)
Q Consensus 141 L~Ls~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~--~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 209 (714)
|+|++|+ |+| .+|..+..++ +|+.|+|++|+++ .+|. .+ ..+++|+.|+|++|+++ .+| .+++++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l-~~L~~L~~L~Ls~N~l~-~lp-~~~~L~ 595 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL-QKMVKLGLLDCVHNKVR-HLE-AFGTNV 595 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH-TTCTTCCEEECTTSCCC-BCC-CCCTTS
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh-hcCCCCCEEECCCCCcc-cch-hhcCCC
Confidence 9999998 998 8999888777 9999999999999 8998 77 46999999999999999 999 999999
Q ss_pred ccccccccccccCCcCcCccccCCCC-cccccCcCCcCCCCCCCCccccCC--CCcccccCCCCCC
Q 005102 210 SLQGTVDFSHNLFSGSIPASLGNLPE-KVYIDLTYNNLSGPIPQNGALMNR--GPTAFIGNPRLCG 272 (714)
Q Consensus 210 ~L~~~l~l~~N~l~g~~p~~~~~l~~-L~~l~l~~N~l~~~~p~~~~~~~~--~~~~~~~n~~~~~ 272 (714)
+|+ .|++++|+++ .+|..+..+++ |+.|++++|+++ .+|........ .......++.+++
T Consensus 596 ~L~-~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 596 KLT-DLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp EES-EEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred cce-EEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 999 9999999999 89999999999 999999999999 66655443322 2233344444544
No 291
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.86 E-value=8.5e-22 Score=212.95 Aligned_cols=132 Identities=22% Similarity=0.257 Sum_probs=79.8
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
.++.+++.++.++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|+.|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 45556666666655444445666666666666666665555566666666666666666665555566666666666666
Q ss_pred CccCCCCCCcc-cccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 145 QNFFNGSLPVS-IVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 145 ~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
+|+++ .+|.. |..+++|++|+|++|++++..|..+ ..+++|+.|++++|+++
T Consensus 126 ~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 126 RNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTF-QATTSLQNLQLSSNRLT 178 (390)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTT-SSCTTCCEEECCSSCCS
T ss_pred CCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhc-cCCCCCCEEECCCCcCC
Confidence 66666 33333 4566666666666666664434333 34566666666666655
No 292
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=4.6e-22 Score=208.01 Aligned_cols=180 Identities=20% Similarity=0.259 Sum_probs=157.1
Q ss_pred cEEEEEcCCCCccccCCccc--cCCCCCCEEEccCCCCcccCC----hhhcCCCCCCEEEcCCCcCcccCCcccCCCCCC
Q 005102 65 RVVSVSIPKKKLLGFLPSAL--GSLTDLRHVNLRNNKFFGSLP----LELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYL 138 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 138 (714)
+++.|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 58999999999999999998 999999999999999998666 445679999999999999998888999999999
Q ss_pred CEEeccCccCCCC--C--CcccccccccceeecccCcCCCCCCcc---cccCccccccccccCCcccccCCCCCCCC---
Q 005102 139 QILDLSQNFFNGS--L--PVSIVQCKRLKALDLSQNNFTGPLPNG---FGSGLVSLEKLNLSFNKFNGSIPSNTGNL--- 208 (714)
Q Consensus 139 ~~L~Ls~N~l~g~--~--p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~l~~L~~L~l~~N~l~g~~p~~~~~l--- 208 (714)
++|+|++|++.+. + +..+..+++|++|+|++|+++ .+|.. +...+++|+.|+|++|++++.+|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999998752 2 233478899999999999997 44442 33457999999999999998889888887
Q ss_pred cccccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 209 SSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 209 ~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
++|+ .|++++|+|+ .+|..+. ++|+.|++++|++++.
T Consensus 251 ~~L~-~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 251 SALN-SLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA 287 (310)
T ss_dssp TTCC-CEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC
T ss_pred CcCC-EEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC
Confidence 5898 9999999999 7788775 8999999999999985
No 293
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.86 E-value=8.9e-22 Score=225.58 Aligned_cols=207 Identities=23% Similarity=0.244 Sum_probs=134.6
Q ss_pred cEEEEEcCCCCccccC--CccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcc-cCCCCCCCEE
Q 005102 65 RVVSVSIPKKKLLGFL--PSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNE-IGKLKYLQIL 141 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L 141 (714)
+++.|+|++|.+++.. |..+..+++|++|+|++|.+.+..|..+..+++|+.|+|++|.+++..|.. +..+++|+.|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 4555555555555544 455566666666666666666556666666666666666666666555443 6666666666
Q ss_pred eccCccCCCCCCcccccccccceeecccCcCCCC---CCcccccCccccccccccCCcccccCCCCCCCCcccccccccc
Q 005102 142 DLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGP---LPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFS 218 (714)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~---~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~ 218 (714)
+|++|.+++..|..+..+++|+.|+|++|++++. .+..+ ..+++|+.|+|++|++++..|..+.++++|+ .|+++
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls 508 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSL-QTLGRLEILVLSFCDLSSIDQHAFTSLKMMN-HVDLS 508 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGG-GGCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEECC
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhh-ccCCCccEEECCCCccCccChhhhccccCCC-EEECC
Confidence 6666666666666666677777777777776642 12233 3467777777777777777777777777777 77777
Q ss_pred cccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccCCCCcccccCCCCCCCC
Q 005102 219 HNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 219 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~ 274 (714)
+|++++..|..+..+++| .|++++|++++.+|.... +.......+.+|+..|.++
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 777777777777777777 777777777777665433 2334455566777777543
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.86 E-value=7.4e-22 Score=206.02 Aligned_cols=208 Identities=20% Similarity=0.191 Sum_probs=181.1
Q ss_pred CCcEEEEEcCCCCccc--cCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC-cccCCCCCCC
Q 005102 63 EQRVVSVSIPKKKLLG--FLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-NEIGKLKYLQ 139 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~ 139 (714)
..+++.|+|++|+++. ..|..+..+++|++|+|++|.+. .+|..+..+++|+.|+|++|.+++..+ ..+..+++|+
T Consensus 51 l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 129 (306)
T 2z66_A 51 LTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 129 (306)
T ss_dssp CTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCC
Confidence 4589999999999984 44778888999999999999998 577789999999999999999996655 5799999999
Q ss_pred EEeccCccCCCCCCcccccccccceeecccCcCCC-CCCcccccCccccccccccCCcccccCCCCCCCCcccccccccc
Q 005102 140 ILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG-PLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFS 218 (714)
Q Consensus 140 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~ 218 (714)
.|+|++|.+++..|..+..+++|++|+|++|.+++ .+|..+ ..+++|+.|+|++|++++..|..+.++++|+ .|+++
T Consensus 130 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~L~ 207 (306)
T 2z66_A 130 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF-TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ-VLNMS 207 (306)
T ss_dssp EEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCC-TTCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEECT
T ss_pred EEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHH-hhCcCCCEEECCCCCcCCcCHHHhcCCCCCC-EEECC
Confidence 99999999998889999999999999999999986 467666 4699999999999999988899999999999 99999
Q ss_pred cccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcccc--CCCCcccccCCCCCCC
Q 005102 219 HNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALM--NRGPTAFIGNPRLCGP 273 (714)
Q Consensus 219 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~--~~~~~~~~~n~~~~~~ 273 (714)
+|.+++..+..+..+++|+.|++++|++++.+|...... ........+|+.-|.+
T Consensus 208 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 208 HNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp TSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 999998888889999999999999999999888765443 3445556677766654
No 295
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.86 E-value=2.1e-21 Score=199.33 Aligned_cols=188 Identities=21% Similarity=0.196 Sum_probs=166.2
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++..+..|.++++|++|+|++|.+++..+..+.++++|+.|+|++|.+++..+..++.+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 35899999999999998888999999999999999999988889999999999999999999987777899999999999
Q ss_pred ccCccCCCC-CCcccccccccceeecccCcCCCCCCcccccCccccc----cccccCCcccccCCCCCCCCccccccccc
Q 005102 143 LSQNFFNGS-LPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLE----KLNLSFNKFNGSIPSNTGNLSSLQGTVDF 217 (714)
Q Consensus 143 Ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~----~L~l~~N~l~g~~p~~~~~l~~L~~~l~l 217 (714)
|++|++++. +|..+..+++|+.|+|++|++++..+..+ ..+.+|+ .|++++|++++..+. .....+|+ .|++
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~l~l~L~ls~n~l~~~~~~-~~~~~~L~-~L~L 207 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL-RVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLK-ELAL 207 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG-HHHHTCTTCCEEEECCSSCCCEECTT-SSCSCCEE-EEEC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh-hhhhhccccceeeecCCCcccccCcc-ccCCCccc-EEEC
Confidence 999999863 79999999999999999999996555555 4467777 899999999955444 44455888 9999
Q ss_pred ccccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 218 SHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 218 ~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
++|++++..+..|..+++|+.|++++|++++..|..
T Consensus 208 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 208 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred CCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 999999877778899999999999999999887654
No 296
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=4e-21 Score=194.39 Aligned_cols=169 Identities=21% Similarity=0.229 Sum_probs=151.4
Q ss_pred cccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCc
Q 005102 55 SWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNS 123 (714)
Q Consensus 55 ~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 123 (714)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|.
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 466777752 368889999999999999999999999999999999999888889999999999999999
Q ss_pred CcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCC
Q 005102 124 FSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPS 203 (714)
Q Consensus 124 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~ 203 (714)
+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|+|++..|.
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF-DKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-TTCTTCCEEECCSSCCSCCCTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHc-CcCcCCCEEECCCCcCCccCHH
Confidence 998777889999999999999999997666678999999999999999995444345 5699999999999999977777
Q ss_pred CCCCCcccccccccccccCCcC
Q 005102 204 NTGNLSSLQGTVDFSHNLFSGS 225 (714)
Q Consensus 204 ~~~~l~~L~~~l~l~~N~l~g~ 225 (714)
.+.++++|+ .+++++|++++.
T Consensus 174 ~~~~l~~L~-~L~l~~N~~~c~ 194 (251)
T 3m19_A 174 AFDRLGKLQ-TITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCC-EEECCSCCBCTT
T ss_pred HHhCCCCCC-EEEeeCCceeCC
Confidence 899999999 999999999865
No 297
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.86 E-value=2.8e-22 Score=209.76 Aligned_cols=180 Identities=19% Similarity=0.202 Sum_probs=158.0
Q ss_pred CCcEEEEEcCCCCccccCCccccCC-----CCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCccc--CCccc--C
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSL-----TDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGS--VPNEI--G 133 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~--~ 133 (714)
..+++.|+|++|++++. |..++.+ ++|++|+|++|++++..|..|..+++|+.|+|++|++.|. +|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45899999999999998 8888887 9999999999999988889999999999999999999876 34455 8
Q ss_pred CCCCCCEEeccCccCCC--CCC-cccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc
Q 005102 134 KLKYLQILDLSQNFFNG--SLP-VSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS 210 (714)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 210 (714)
.+++|+.|+|++|++++ .++ ..+..+++|+.|+|++|++++.+|...+..+++|+.|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 99999999999999983 223 234578999999999999998776554456899999999999999 8998887 78
Q ss_pred cccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 211 LQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 211 L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
|+ .|++++|+|++. |. +..+++|+.|++++|++++.
T Consensus 276 L~-~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 276 LS-VLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp EE-EEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ce-EEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 88 999999999976 66 99999999999999999864
No 298
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.85 E-value=1.6e-21 Score=216.75 Aligned_cols=209 Identities=19% Similarity=0.181 Sum_probs=147.9
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..+..|.++++|+.|+|
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEE
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeC
Confidence 45666666666666666666666666666666666666666666666666666666666666444444555555555555
Q ss_pred cCccCCCCCCcccccc------------------------cccceeecccCcCCCCCCcccccCccccccccccCCcccc
Q 005102 144 SQNFFNGSLPVSIVQC------------------------KRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l------------------------~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g 199 (714)
++|.+.+..+..|..+ .+|+.|+|++|+++ .+|...+..+++|+.|+|++|++++
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~ 262 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPIST 262 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCc
Confidence 5555554444444444 45666666667776 4554444568999999999999998
Q ss_pred cCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccCCCCcccccCCCCCCCC
Q 005102 200 SIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 200 ~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~ 274 (714)
..+..+.++++|+ .|++++|++++..|..|..+++|+.|++++|++++..+..+. +.......+.+|+..|.+.
T Consensus 263 ~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 263 IEGSMLHELLRLQ-EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp ECTTSCTTCTTCC-EEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred cChhhccccccCC-EEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 8788899999999 999999999999999999999999999999999988776543 3344556677888888654
No 299
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.85 E-value=2.2e-21 Score=221.52 Aligned_cols=185 Identities=18% Similarity=0.121 Sum_probs=150.5
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..|+++++|+.|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47888999999999999999999999999999999999988888999999999999999999655556799999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCc-------------------------------------cc
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGL-------------------------------------VS 186 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l-------------------------------------~~ 186 (714)
++|.+++..|..|..+++|+.|+|++|.+++. +......| .+
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-ChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 99999988888999999999999999999853 32111111 23
Q ss_pred cccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 187 LEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 187 L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
|+.|+|++|.+++ +..+.++++|+ .|+|++|.+++.+|..|+.+++|+.|++++|++++.++.
T Consensus 234 L~~L~L~~n~l~~--~~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 296 (597)
T 3oja_B 234 LTILKLQHNNLTD--TAWLLNYPGLV-EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLY 296 (597)
T ss_dssp CCEEECCSSCCCC--CGGGGGCTTCS-EEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECS
T ss_pred CCEEECCCCCCCC--ChhhccCCCCC-EEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcc
Confidence 5555555555554 34567777777 888888888888888888888888888888888775433
No 300
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.85 E-value=3.4e-21 Score=223.80 Aligned_cols=209 Identities=24% Similarity=0.236 Sum_probs=138.3
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCC-hhhcCCCCCCEEEcCCCcCcc----------------
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLP-LELLEAQGLQSLVLYGNSFSG---------------- 126 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~g---------------- 126 (714)
..++.|+|++|++++..|..|..+++|+.|+|++|.+++.+| ..+..+++|+.|+|++|++++
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 367777777777777777777777777777777777776655 456667777777777776654
Q ss_pred ----------cCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCC----C---cccccCcccccc
Q 005102 127 ----------SVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPL----P---NGFGSGLVSLEK 189 (714)
Q Consensus 127 ----------~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~----p---~~~~~~l~~L~~ 189 (714)
.+|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++.. | ...+.++++|+.
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~ 540 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHI 540 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCE
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCE
Confidence 44555666666666666666666555555666666666666666665321 1 111245667777
Q ss_pred ccccCCcccccCC-CCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc--ccCCCCccccc
Q 005102 190 LNLSFNKFNGSIP-SNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA--LMNRGPTAFIG 266 (714)
Q Consensus 190 L~l~~N~l~g~~p-~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~~~~~~~~ 266 (714)
|+|++|+++ .+| ..|.++++|+ .+++++|++++..+..|..+++|+.|++++|++++.+|.... +.......+.+
T Consensus 541 L~L~~N~l~-~i~~~~~~~l~~L~-~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~ 618 (680)
T 1ziw_A 541 LNLESNGFD-EIPVEVFKDLFELK-IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 618 (680)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTT
T ss_pred EECCCCCCC-CCCHHHcccccCcc-eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccC
Confidence 777777776 444 3467777777 777777777766666667777777777777777776665432 33444566778
Q ss_pred CCCCCCCC
Q 005102 267 NPRLCGPP 274 (714)
Q Consensus 267 n~~~~~~~ 274 (714)
|++.|+++
T Consensus 619 N~~~c~c~ 626 (680)
T 1ziw_A 619 NPFDCTCE 626 (680)
T ss_dssp CCCCBCCC
T ss_pred CCcccCCc
Confidence 88888765
No 301
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.85 E-value=1.2e-20 Score=199.18 Aligned_cols=201 Identities=19% Similarity=0.256 Sum_probs=167.8
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++..|..|.++++|++|+|++|+++ .+|..+. ++|+.|+|++|.+++..+..|..+++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 458999999999999999999999999999999999998 6776665 8999999999999976666799999999999
Q ss_pred ccCccCC--CCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccc
Q 005102 143 LSQNFFN--GSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHN 220 (714)
Q Consensus 143 Ls~N~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N 220 (714)
|++|.++ +..|..+..+ +|+.|++++|+++ .+|..+. ++|+.|+|++|++++..|..+.++++|+ .|++++|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~-~L~L~~N 227 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLY-RLGLGHN 227 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCS-CCBCCSS
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCC-EEECCCC
Confidence 9999996 4778888888 8999999999998 4787663 6899999999999987778899999999 9999999
Q ss_pred cCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCC
Q 005102 221 LFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGP 273 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~ 273 (714)
++++..|..++.+++|+.|++++|+++ .+|...............++.+...
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 999888888999999999999999998 4555433333333333344444433
No 302
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.84 E-value=4.1e-21 Score=228.19 Aligned_cols=200 Identities=17% Similarity=0.095 Sum_probs=178.8
Q ss_pred CcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccC-ChhhcCCCCCCEEEcCCCcCcccCCccc
Q 005102 54 CSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSL-PLELLEAQGLQSLVLYGNSFSGSVPNEI 132 (714)
Q Consensus 54 c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 132 (714)
|.|..|-+-..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 456666654578999999999999999999999999999999999777666 7789999999999999999999999999
Q ss_pred CCCCCCCEEeccCccCCCCCCcc--cccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCC--
Q 005102 133 GKLKYLQILDLSQNFFNGSLPVS--IVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNL-- 208 (714)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-- 208 (714)
+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..|...+.++++|+.|+|++|.+++..|..+..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999877765 89999999999999999976664444679999999999999999999988877
Q ss_pred cccccccccccccCCcCcCccccCCCC------cccccCcCCcCCCCCCCCc
Q 005102 209 SSLQGTVDFSHNLFSGSIPASLGNLPE------KVYIDLTYNNLSGPIPQNG 254 (714)
Q Consensus 209 ~~L~~~l~l~~N~l~g~~p~~~~~l~~------L~~l~l~~N~l~~~~p~~~ 254 (714)
++|+ .|+++.|.+++..|..++.+++ |+.|++++|++++.+|...
T Consensus 174 ~~L~-~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 224 (844)
T 3j0a_A 174 KTLS-FFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNF 224 (844)
T ss_dssp CSSC-CCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGG
T ss_pred Cccc-eEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHH
Confidence 7888 9999999999999998888776 9999999999998877543
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.84 E-value=5e-21 Score=219.34 Aligned_cols=183 Identities=18% Similarity=0.175 Sum_probs=164.4
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47889999999999999989999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCC-CCCcccccCccccccccccCCcccccCCCCCCCCccccc---cccccc
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTG-PLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQG---TVDFSH 219 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~---~l~l~~ 219 (714)
++|++++..|..+.++++|++|+|++|.+++ .+|..+. ++++|+.|+|++|++++..|..++.+.+|+. .+++++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS-NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG-TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHh-hcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 9999997777889999999999999999986 6788884 6999999999999999888888888777642 699999
Q ss_pred ccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 220 NLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 220 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
|.+++..+..+... +|+.|++++|.+++
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSS 218 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCH
T ss_pred CCcceeCcccccCc-eeeeeeccCCccch
Confidence 99997666666655 89999999998873
No 304
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.84 E-value=3.7e-21 Score=218.29 Aligned_cols=162 Identities=23% Similarity=0.223 Sum_probs=136.7
Q ss_pred cCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCC--CCCcccccccccceeecccCcCCCCCCcccccCccc
Q 005102 109 LEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNG--SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVS 186 (714)
Q Consensus 109 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~ 186 (714)
..+++|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++.+|...+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 577899999999999999899999999999999999999986 335678899999999999999998788876677999
Q ss_pred cccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCC-CccccCCCCcccc
Q 005102 187 LEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQ-NGALMNRGPTAFI 265 (714)
Q Consensus 187 L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~ 265 (714)
|+.|+|++|++++.+|..+. ++|+ .|++++|+|+ .+|..+..+++|+.|++++|++++.++. ...+.........
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~-~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVK-VLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCS-EEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCC-EEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEec
Confidence 99999999999988887765 6788 9999999998 7888888999999999999999965554 2333444556677
Q ss_pred cCCCCCCCC
Q 005102 266 GNPRLCGPP 274 (714)
Q Consensus 266 ~n~~~~~~~ 274 (714)
+|++.|.++
T Consensus 506 ~N~~~c~c~ 514 (562)
T 3a79_B 506 DNPWDCTCP 514 (562)
T ss_dssp SCCBCCCHH
T ss_pred CCCcCCCcc
Confidence 888888654
No 305
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.84 E-value=1e-20 Score=204.51 Aligned_cols=184 Identities=18% Similarity=0.115 Sum_probs=144.0
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..+..+++|++|+|++|.++...+..|+++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 47888999999999988889999999999999999999888888999999999999999998444444689999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccC-------------------------------------ccc
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSG-------------------------------------LVS 186 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~-------------------------------------l~~ 186 (714)
++|++++..|..|..+++|+.|+|++|++++. +...... .++
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 227 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 227 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSS
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccccCCCCcceEEECCCCeeeecccccccc
Confidence 99999987788899999999999999998743 2211111 124
Q ss_pred cccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCC
Q 005102 187 LEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 187 L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
|+.|+|++|++++. ..+.++++|+ .|++++|.+++..|..|..+++|+.|++++|++++..+
T Consensus 228 L~~L~l~~n~l~~~--~~l~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (390)
T 3o6n_A 228 LTILKLQHNNLTDT--AWLLNYPGLV-EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNL 289 (390)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCS-EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEEC
T ss_pred ccEEECCCCCCccc--HHHcCCCCcc-EEECCCCcCCCcChhHccccccCCEEECCCCcCcccCc
Confidence 55555555555532 3566677777 78888888887777788888888888888888776543
No 306
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=5.1e-21 Score=214.53 Aligned_cols=183 Identities=23% Similarity=0.346 Sum_probs=147.2
Q ss_pred CCCCCCCCCCCC-----cccce-EecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCE
Q 005102 43 LSNWNSSDENPC-----SWNGI-TCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQS 116 (714)
Q Consensus 43 l~~w~~~~~~~c-----~w~gv-~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 116 (714)
+.+|.. +.+|| .|.|+ .|...+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 345754 34678 69999 8987899999999999998 787663 88999999999998 677 45789999
Q ss_pred EEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCc
Q 005102 117 LVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNK 196 (714)
Q Consensus 117 L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~ 196 (714)
|+|++|.|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE----LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC----cCCCcCEEECCCCC
Confidence 9999999996 777 765 99999999999986 776 67899999999999985 776 36789999999999
Q ss_pred ccccCCCCCCCCcccccccccccccCCcCcCccccCCCCc-------ccccCcCCcCCCCCCCCcc
Q 005102 197 FNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEK-------VYIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 197 l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L-------~~l~l~~N~l~~~~p~~~~ 255 (714)
|++ +|. +. ++|+ .|+|++|+|+ .+|. +.. +| +.|++++|+|+..++....
T Consensus 172 L~~-lp~-l~--~~L~-~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~ 228 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLE-ALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILS 228 (571)
T ss_dssp CSC-CCC-CC--TTCC-EEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCCCGGGGG
T ss_pred CCC-cch-hh--CCCC-EEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHHhc
Confidence 985 777 65 7888 8999999998 6676 554 66 8899999999864433333
No 307
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=5.7e-22 Score=230.30 Aligned_cols=229 Identities=18% Similarity=0.184 Sum_probs=141.5
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCE-----EE
Q 005102 20 SLNGEGYALLSFKQSVHEDPEGSLSNWNSSDENPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRH-----VN 94 (714)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~-----L~ 94 (714)
....++++|+++.+++.+..+..-.+|.......+.|.++.++..+++.|+|.+|.+... +..+.....|.. ++
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcc-hhhHhhcCccCcccccCcc
Confidence 345678999999988866656666678665555678999999999999999999998873 433332222222 23
Q ss_pred ccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCC
Q 005102 95 LRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG 174 (714)
Q Consensus 95 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 174 (714)
++.|++. ..|..+..+++|+.|+|++|.+. .+|..+.++++|+.|+|++|+|+ .+|..|.+|++|+.|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3344444 45777889999999999999998 88988889999999999999998 89999999999999999999999
Q ss_pred CCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCC-cccccCcCCcCCCCCCCC
Q 005102 175 PLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPE-KVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 175 ~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~-L~~l~l~~N~l~~~~p~~ 253 (714)
.+|..++ .|++|+.|+|++|.|+ .+|..|+++++|+ .|+|++|.|++.+|..+..+.. +..|++++|.++|.+|..
T Consensus 284 ~lp~~~~-~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 284 SLPAELG-SCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ-FLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp SCCSSGG-GGTTCSEEECCSSCCC-CCCSSTTSCTTCC-CEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred ccChhhc-CCCCCCEEECCCCCCC-ccChhhhcCCCcc-EEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 8899885 5999999999999997 8999999999999 9999999999999988876543 345889999999999986
Q ss_pred ccc
Q 005102 254 GAL 256 (714)
Q Consensus 254 ~~~ 256 (714)
...
T Consensus 361 l~~ 363 (727)
T 4b8c_D 361 RRF 363 (727)
T ss_dssp ---
T ss_pred cce
Confidence 543
No 308
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=216.61 Aligned_cols=204 Identities=25% Similarity=0.214 Sum_probs=171.6
Q ss_pred cEEEEEcCCCCccccCCccc-----cCCCCCCEEEccCCCCcccCC-hh-------------------------hcCCCC
Q 005102 65 RVVSVSIPKKKLLGFLPSAL-----GSLTDLRHVNLRNNKFFGSLP-LE-------------------------LLEAQG 113 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~-------------------------~~~l~~ 113 (714)
+++.|++++|+++|.+|..+ +.+++|+.+++++|.+ .+| .. +..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 78889999999999999888 7787777777777776 344 11 157889
Q ss_pred CCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCC--CCCcccccccccceeecccCcCCCCCCcccccCcccccccc
Q 005102 114 LQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNG--SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLN 191 (714)
Q Consensus 114 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~ 191 (714)
|+.|+|++|.+++.+|..++.+++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++.+|...+..+++|+.|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999999999999999999999999999999996 56778999999999999999999878887556789999999
Q ss_pred ccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCc-cccCCCCcccccCCCC
Q 005102 192 LSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNG-ALMNRGPTAFIGNPRL 270 (714)
Q Consensus 192 l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~ 270 (714)
|++|++++.+|..+. ++|+ .|++++|+|+ .+|..+..+++|+.|++++|+++..++... .+.........+|+..
T Consensus 406 Ls~N~l~~~~~~~l~--~~L~-~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 481 (520)
T 2z7x_B 406 MSSNILTDTIFRCLP--PRIK-VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481 (520)
T ss_dssp CCSSCCCGGGGGSCC--TTCC-EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCCCCcchhhhhc--ccCC-EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCc
Confidence 999999999888775 6788 9999999999 889888899999999999999996555423 3334455667788877
Q ss_pred CCCC
Q 005102 271 CGPP 274 (714)
Q Consensus 271 ~~~~ 274 (714)
|.++
T Consensus 482 c~c~ 485 (520)
T 2z7x_B 482 CSCP 485 (520)
T ss_dssp CCHH
T ss_pred ccCC
Confidence 7654
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.83 E-value=2.9e-21 Score=202.55 Aligned_cols=194 Identities=21% Similarity=0.166 Sum_probs=129.6
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|.+++..| +..+++|++|+|++|++++.. ..++|+.|+|++|++++..+. .+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEEC
Confidence 345555555555554433 555555555555555554321 224555555555555543333 3577888888
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|++++..|..+..+++|+.|+|++|.+++..|..+...+++|+.|+|++|++++. |.. ..+++|+ .|++++|+++
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~-~~l~~L~-~L~Ls~N~l~ 204 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQ-VVFAKLK-TLDLSSNKLA 204 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECC-CCCTTCC-EEECCSSCCC
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccc-cccccCC-EEECCCCcCC
Confidence 888888777778888889999999999988766666655678899999999998844 433 3478888 8999999998
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLC 271 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~ 271 (714)
+ +|..+..+++|+.|++++|++++.++............+.+|+..|
T Consensus 205 ~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 205 F-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp E-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBH
T ss_pred c-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccC
Confidence 5 4556888899999999999998654333233334444555666554
No 310
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.83 E-value=3.7e-20 Score=195.29 Aligned_cols=205 Identities=21% Similarity=0.267 Sum_probs=169.3
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++..|..|.++++|++|+|++|.++ .+|..+. ++|+.|+|++|.+++..+..+.++++|+.|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 468999999999999999999999999999999999998 6776655 7899999999999987777899999999999
Q ss_pred ccCccCCC--CCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccc
Q 005102 143 LSQNFFNG--SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHN 220 (714)
Q Consensus 143 Ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N 220 (714)
|++|.++. ..+..+..+++|+.|++++|.++ .+|..+. ++|+.|+|++|++++..|..+..+++|+ .|++++|
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~Ls~n 226 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLA-KLGLSFN 226 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCC-EEECCSS
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCC-EEECCCC
Confidence 99999963 67888999999999999999998 5777653 7899999999999988888899999998 9999999
Q ss_pred cCCcCcCccccCCCCcccccCcCCcCCCCCCCCccccCCCCcccccCCCCCCCCCC
Q 005102 221 LFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPRLCGPPLK 276 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~~~ 276 (714)
.+++..+..+..+++|+.|++++|+++ .+|...............++.+...+..
T Consensus 227 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~ 281 (330)
T 1xku_A 227 SISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSN 281 (330)
T ss_dssp CCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTT
T ss_pred cCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChh
Confidence 999888888999999999999999998 4444433333333344444445544433
No 311
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.83 E-value=1.9e-20 Score=214.50 Aligned_cols=182 Identities=24% Similarity=0.293 Sum_probs=129.2
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcc-cCCCCCCCEEe
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNE-IGKLKYLQILD 142 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~ 142 (714)
.+++.|+|++|+++ .+|..+..+++|++|+|++|.+.+..|..+..+++|+.|+|++|.+.+.+|.. +..+++|+.|+
T Consensus 278 ~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 356 (606)
T 3t6q_A 278 SGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELD 356 (606)
T ss_dssp TTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEE
T ss_pred cCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEE
Confidence 46777788877777 56777777778888888888777766777777777777777777777666654 67777777777
Q ss_pred ccCccCCCCC--CcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCC-CCCCccccccccccc
Q 005102 143 LSQNFFNGSL--PVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSN-TGNLSSLQGTVDFSH 219 (714)
Q Consensus 143 Ls~N~l~g~~--p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~~l~l~~ 219 (714)
|++|++++.. |..+..+++|+.|++++|++++..|..+ ..+++|+.|++++|++++..|.. +.++++|+ .|++++
T Consensus 357 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~-~L~l~~ 434 (606)
T 3t6q_A 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAF-KECPQLELLDLAFTRLKVKDAQSPFQNLHLLK-VLNLSH 434 (606)
T ss_dssp CCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTT-TTCTTCSEEECTTCCEECCTTCCTTTTCTTCC-EEECTT
T ss_pred CCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHh-cCCccCCeEECCCCcCCCcccchhhhCcccCC-EEECCC
Confidence 7777776544 5667777777777777777765555555 34677777777777776665543 66677777 777777
Q ss_pred ccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 220 NLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 220 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
|.+++..|..++.+++|+.|++++|++++
T Consensus 435 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 435 SLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp CCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred CccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 77776667777777777777777777765
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.83 E-value=2.8e-20 Score=204.37 Aligned_cols=182 Identities=20% Similarity=0.250 Sum_probs=150.5
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC--------------
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-------------- 129 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-------------- 129 (714)
.+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+++..+
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 467778888888877777777778888888888887776555567777777777777777664333
Q ss_pred -----------cccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 130 -----------NEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 130 -----------~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
..|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|++++..|..+ .++++|+.|+|++|+++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSF-QGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTT-TTCTTCCEEECTTCCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhh-ccCccCCEEECCCCcee
Confidence 24667788888888888887 566 48889999999999999997667666 57999999999999999
Q ss_pred ccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 199 GSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 199 g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
+..|..+.++++|+ .|+|++|+|++..+..|..+++|+.|++++|.+.-.
T Consensus 245 ~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 245 VIERNAFDNLQSLV-EINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp EECTTSSTTCTTCC-EEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred EEChhhhcCCCCCC-EEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 98899999999999 999999999988888899999999999999998743
No 313
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=5.2e-20 Score=180.48 Aligned_cols=173 Identities=22% Similarity=0.227 Sum_probs=148.0
Q ss_pred CcccceEec----CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC
Q 005102 54 CSWNGITCK----EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP 129 (714)
Q Consensus 54 c~w~gv~c~----~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p 129 (714)
|+..|++.- ..+++.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+
T Consensus 14 c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 93 (208)
T 2o6s_A 14 CYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPN 93 (208)
T ss_dssp CCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCH
Confidence 555554332 3478999999999998877788999999999999999997766678899999999999999997767
Q ss_pred cccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCc
Q 005102 130 NEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLS 209 (714)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 209 (714)
..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++ +|...+..+++|+.|+|++|.+.+.. +
T Consensus 94 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~~-------~ 165 (208)
T 2o6s_A 94 GVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTC-------P 165 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSCCBCCCT-------T
T ss_pred hHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce-eCHHHhccCCCccEEEecCCCeecCC-------C
Confidence 778999999999999999997666678999999999999999995 55554457999999999999988554 4
Q ss_pred ccccccccccccCCcCcCccccCCCC
Q 005102 210 SLQGTVDFSHNLFSGSIPASLGNLPE 235 (714)
Q Consensus 210 ~L~~~l~l~~N~l~g~~p~~~~~l~~ 235 (714)
.++ .++++.|+++|.+|.+++.++.
T Consensus 166 ~l~-~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 166 GIR-YLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTH-HHHHHHHHCTTTBBCTTSSBCT
T ss_pred CHH-HHHHHHHhCCceeeccCccccC
Confidence 677 8999999999999999988764
No 314
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.82 E-value=8.2e-20 Score=212.19 Aligned_cols=188 Identities=20% Similarity=0.115 Sum_probs=134.9
Q ss_pred CCcEEEEEcCCCCccccC--CccccCC--CCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC-cccCCCCC
Q 005102 63 EQRVVSVSIPKKKLLGFL--PSALGSL--TDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-NEIGKLKY 137 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~--p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~ 137 (714)
..+++.|+|++|.+.+.. +..+..+ ++|+.|+|++|++++..|..+..+++|+.|+|++|.+++.+| ..+.++++
T Consensus 352 l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 431 (680)
T 1ziw_A 352 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLEN 431 (680)
T ss_dssp CTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTT
T ss_pred ccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCccc
Confidence 358999999999865432 2334333 589999999999999999999999999999999999998777 67899999
Q ss_pred CCEEeccCccCCCCCCcccccccccceeecccCcCC--CCCCcccccCccccccccccCCcccccCCCCCCCCccccccc
Q 005102 138 LQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFT--GPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTV 215 (714)
Q Consensus 138 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~--g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l 215 (714)
|+.|+|++|++.+..+..|..+++|+.|++++|.++ +.+|..+ ..+++|+.|+|++|++++..|..+..+++|+ .|
T Consensus 432 L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~-~L 509 (680)
T 1ziw_A 432 IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF-QPLRNLTILDLSNNNIANINDDMLEGLEKLE-IL 509 (680)
T ss_dssp CCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTT-TTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EE
T ss_pred ccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCccc-ccCCCCCEEECCCCCCCcCChhhhccccccC-EE
Confidence 999999999988766666666666666666666665 3455555 3466666666666666655555566666666 66
Q ss_pred ccccccCCcCcC--------ccccCCCCcccccCcCCcCCCCCCC
Q 005102 216 DFSHNLFSGSIP--------ASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 216 ~l~~N~l~g~~p--------~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
++++|++++..+ ..|..+++|+.|++++|+++..++.
T Consensus 510 ~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 554 (680)
T 1ziw_A 510 DLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVE 554 (680)
T ss_dssp ECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred eCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHH
Confidence 666666654321 1255666666666666666644433
No 315
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=6.4e-20 Score=182.68 Aligned_cols=159 Identities=23% Similarity=0.270 Sum_probs=121.4
Q ss_pred CCCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc
Q 005102 51 ENPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN 130 (714)
Q Consensus 51 ~~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 130 (714)
.+.|+|.+|.|... +++ .+|..+. ++|++|+|++|.|++..|..|..+++|+.|+|++|+|++..+.
T Consensus 16 ~~~Cs~~~v~c~~~----------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 82 (229)
T 3e6j_A 16 QCSCSGTTVDCRSK----------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVG 82 (229)
T ss_dssp TCEEETTEEECTTS----------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCEEeCCEeEccCC----------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChh
Confidence 46799999999743 332 4555443 7889999999999988888888888999999999998755556
Q ss_pred ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc
Q 005102 131 EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS 210 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 210 (714)
.|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+ ..+++|+.|+|++|+|++..+..+..+++
T Consensus 83 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 160 (229)
T 3e6j_A 83 VFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI-ERLTHLTHLALDQNQLKSIPHGAFDRLSS 160 (229)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTG-GGCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred hcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCccc-ccCCCCCEEECCCCcCCccCHHHHhCCCC
Confidence 6788888888888888888666666778888888888888887 677776 35778888888888777554455666667
Q ss_pred cccccccccccCCcC
Q 005102 211 LQGTVDFSHNLFSGS 225 (714)
Q Consensus 211 L~~~l~l~~N~l~g~ 225 (714)
|+ .+++++|.+++.
T Consensus 161 L~-~L~l~~N~~~c~ 174 (229)
T 3e6j_A 161 LT-HAYLFGNPWDCE 174 (229)
T ss_dssp CC-EEECTTSCBCTT
T ss_pred CC-EEEeeCCCccCC
Confidence 76 677777766643
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.82 E-value=3.9e-20 Score=204.01 Aligned_cols=184 Identities=20% Similarity=0.193 Sum_probs=158.0
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc------------
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN------------ 130 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~------------ 130 (714)
..+++.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+++..+.
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 35788899999999988888899999999999999998876666788888888888888888744332
Q ss_pred -------------ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcc
Q 005102 131 -------------EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKF 197 (714)
Q Consensus 131 -------------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l 197 (714)
.|.++++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..|..+ .++++|+.|+|++|++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~n~l 254 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSF-HGLSSLKKLWVMNSQV 254 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGG-TTCTTCCEEECTTSCC
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccc-cCccCCCEEEeCCCcC
Confidence 35667788888888888874 45 58889999999999999997667766 5799999999999999
Q ss_pred cccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCC
Q 005102 198 NGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPI 250 (714)
Q Consensus 198 ~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~ 250 (714)
++..|..+.++++|+ .|+|++|+|++..+..|..+++|+.|++++|.+...-
T Consensus 255 ~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 255 SLIERNAFDGLASLV-ELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CEECTTTTTTCTTCC-EEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred ceECHHHhcCCCCCC-EEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 998899999999999 9999999999888888999999999999999987543
No 317
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=211.88 Aligned_cols=205 Identities=20% Similarity=0.189 Sum_probs=164.0
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccC--ChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSL--PLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
.++.|++.+|.+.+.++. ..+++|++|+|++|.+++.. |..+..+++|+.|+|++|.+++. |..+..+++|+.|+
T Consensus 326 ~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~ 402 (570)
T 2z63_A 326 SLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLD 402 (570)
T ss_dssp SCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEE
T ss_pred ccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEE
Confidence 455555556655555443 67888999999999888654 77888899999999999999854 44488899999999
Q ss_pred ccCccCCCCCC-cccccccccceeecccCcCCCCCCcccccCccccccccccCCccc-ccCCCCCCCCcccccccccccc
Q 005102 143 LSQNFFNGSLP-VSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN-GSIPSNTGNLSSLQGTVDFSHN 220 (714)
Q Consensus 143 Ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~-g~~p~~~~~l~~L~~~l~l~~N 220 (714)
+++|++++..| ..+..+++|+.|+|++|.+++.+|..+ .++++|+.|+|++|+++ +.+|..+..+++|+ .|++++|
T Consensus 403 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~-~L~l~~n 480 (570)
T 2z63_A 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF-NGLSSLEVLKMAGNSFQENFLPDIFTELRNLT-FLDLSQC 480 (570)
T ss_dssp CTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTT-TTCTTCCEEECTTCEEGGGEECSCCTTCTTCC-EEECTTS
T ss_pred ccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhh-hcCCcCcEEECcCCcCccccchhhhhcccCCC-EEECCCC
Confidence 99999987666 467889999999999999987777766 46899999999999997 67899999999999 9999999
Q ss_pred cCCcCcCccccCCCCcccccCcCCcCCCCCCCCcc-ccCCCCcccccCCCCCCCC
Q 005102 221 LFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA-LMNRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~ 274 (714)
++++..|..|+.+++|+.|++++|++++.+|.... +.......+.+|+..|.++
T Consensus 481 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 481 QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 99988899999999999999999999988876543 3344455666777666544
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=213.65 Aligned_cols=189 Identities=20% Similarity=0.172 Sum_probs=173.7
Q ss_pred CCcEEEEEcCCCCccccC--CccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC-cccCCCCCCC
Q 005102 63 EQRVVSVSIPKKKLLGFL--PSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-NEIGKLKYLQ 139 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~ 139 (714)
..+++.|+|++|++++.. |..+.++++|++|+|++|.+.+..+ .+..+++|+.|+|++|.+++..| ..+.++++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 468999999999999765 7889999999999999999996544 49999999999999999998776 5689999999
Q ss_pred EEeccCccCCCCCCcccccccccceeecccCcCC-CCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccc
Q 005102 140 ILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFT-GPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFS 218 (714)
Q Consensus 140 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~ 218 (714)
.|+|++|++++..|..+..+++|+.|+|++|.++ +.+|..+ ..+++|+.|+|++|++++..|..+.++++|+ .|+++
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~ 502 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF-TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ-VLNMA 502 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC-TTCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEECC
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhh-hcccCCCEEECCCCccccCChhhhhcccCCC-EEeCC
Confidence 9999999999999999999999999999999998 5788777 4699999999999999988899999999999 99999
Q ss_pred cccCCcCcCccccCCCCcccccCcCCcCCCCCCCCc
Q 005102 219 HNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNG 254 (714)
Q Consensus 219 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 254 (714)
+|++++..|..|..+++|+.|++++|++++..|...
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 999999988999999999999999999999988754
No 319
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.81 E-value=5.1e-20 Score=206.91 Aligned_cols=137 Identities=21% Similarity=0.199 Sum_probs=106.0
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 47888888888888887788888888888888888888877888888888888888888888 56666 7888888888
Q ss_pred cCccCCC-CCCcccccccccceeecccCcCCCCCCcccccCcccc--ccccccCCcc--cccCCCCCCC
Q 005102 144 SQNFFNG-SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSL--EKLNLSFNKF--NGSIPSNTGN 207 (714)
Q Consensus 144 s~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L--~~L~l~~N~l--~g~~p~~~~~ 207 (714)
++|++++ .+|..|+.+++|++|+|++|++++ ..+ ..+++| +.|+|++|++ .+.+|..+..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~-~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSV-LPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGG-GGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhc-cccccceeeEEEeecccccccccccccccc
Confidence 8888886 477888888888888888888764 122 235555 6667776666 5555555554
No 320
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.81 E-value=3.7e-20 Score=210.03 Aligned_cols=162 Identities=25% Similarity=0.311 Sum_probs=146.4
Q ss_pred cCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcc--cCCcccCCCCCCCEEeccCccCCCCCCc-ccccccc
Q 005102 85 GSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSG--SVPNEIGKLKYLQILDLSQNFFNGSLPV-SIVQCKR 161 (714)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~ 161 (714)
..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++ .+|..++++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 788999999999999999999999999999999999999996 3456799999999999999999986776 4888999
Q ss_pred cceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCcc-ccCCCCccccc
Q 005102 162 LKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPAS-LGNLPEKVYID 240 (714)
Q Consensus 162 L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~-~~~l~~L~~l~ 240 (714)
|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+.++++|+ .|++++|+|+ .+|.. +..+++|+.|+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~---~~L~~L~L~~N~l~-~ip~~~~~l~~L~-~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 503 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP---PKVKVLDLHNNRIM-SIPKDVTHLQALQ-ELNVASNQLK-SVPDGVFDRLTSLQYIW 503 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC---TTCSEEECCSSCCC-CCCTTTTSSCCCS-EEECCSSCCC-CCCTTSTTTCTTCCCEE
T ss_pred CCEEECCCCCCCcchhhhhc---CcCCEEECCCCcCc-ccChhhcCCCCCC-EEECCCCCCC-CCCHHHHhcCCCCCEEE
Confidence 99999999999987776552 69999999999999 8999888999999 9999999999 56665 99999999999
Q ss_pred CcCCcCCCCCCC
Q 005102 241 LTYNNLSGPIPQ 252 (714)
Q Consensus 241 l~~N~l~~~~p~ 252 (714)
+++|++.+..|.
T Consensus 504 l~~N~~~c~c~~ 515 (562)
T 3a79_B 504 LHDNPWDCTCPG 515 (562)
T ss_dssp CCSCCBCCCHHH
T ss_pred ecCCCcCCCcch
Confidence 999999987664
No 321
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=9.9e-20 Score=180.08 Aligned_cols=153 Identities=21% Similarity=0.206 Sum_probs=109.5
Q ss_pred EEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCCh-hhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCc
Q 005102 68 SVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPL-ELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQN 146 (714)
Q Consensus 68 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 146 (714)
.+++++|+++. +|..+. ..+++|+|++|+|++..|. .|..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 34445666664 566553 3568888888888876553 4678888888888888888777777888888888888888
Q ss_pred cCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcC
Q 005102 147 FFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGS 225 (714)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~ 225 (714)
++++..|..|..+++|++|+|++|++++..|..+ .++++|+.|+|++|+|++..|..+..+++|+ .|++++|.+++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~c~ 168 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSF-IGLSSVRLLSLYDNQITTVAPGAFDTLHSLS-TLNLLANPFNCN 168 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSS-TTCTTCSEEECTTSCCCCBCTTTTTTCTTCC-EEECCSCCEECS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHc-CCCccCCEEECCCCcCCEECHHHhcCCCCCC-EEEecCcCCcCC
Confidence 8886666667777888888888888776555555 3567777777777777766666666666666 666666666544
No 322
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.81 E-value=2.2e-20 Score=195.20 Aligned_cols=179 Identities=19% Similarity=0.135 Sum_probs=152.9
Q ss_pred CCcEEEEEcCCCCccccCC----ccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCccc--C--CcccCC
Q 005102 63 EQRVVSVSIPKKKLLGFLP----SALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGS--V--PNEIGK 134 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~--~--p~~~~~ 134 (714)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|++++..|..+..+++|++|+|++|++.+. + +..++.
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4578899999999998766 4556899999999999999988889999999999999999998753 3 233578
Q ss_pred CCCCCEEeccCccCCCCCCc----ccccccccceeecccCcCCCCCCcccccC--ccccccccccCCcccccCCCCCCCC
Q 005102 135 LKYLQILDLSQNFFNGSLPV----SIVQCKRLKALDLSQNNFTGPLPNGFGSG--LVSLEKLNLSFNKFNGSIPSNTGNL 208 (714)
Q Consensus 135 l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~g~~p~~~~~~--l~~L~~L~l~~N~l~g~~p~~~~~l 208 (714)
+++|++|+|++|+++ .+|. .+..+++|++|+|++|++++.+|..++.. +++|+.|+|++|+|+ .+|..+.
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-- 271 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-- 271 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--
Confidence 999999999999997 4444 25788999999999999998878777532 269999999999999 8898875
Q ss_pred cccccccccccccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 209 SSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 209 ~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
++|+ .|++++|+|++. |. +..+++|+.|++++|+++.
T Consensus 272 ~~L~-~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 AKLR-VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCCS-CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCC-EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7898 999999999964 43 6888999999999999974
No 323
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.81 E-value=3.6e-20 Score=197.36 Aligned_cols=187 Identities=20% Similarity=0.243 Sum_probs=163.0
Q ss_pred cceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCC
Q 005102 57 NGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLK 136 (714)
Q Consensus 57 ~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~ 136 (714)
..+.|....+ .++++++++. +|..+. ++|++|+|++|++++..+..+.++++|+.|+|++|.+++..|..|++++
T Consensus 26 ~~~~C~~~~~--c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (353)
T 2z80_A 26 ASLSCDRNGI--CKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLG 100 (353)
T ss_dssp -CCEECTTSE--EECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cCCCCCCCeE--eeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCC
Confidence 3577876555 7889999885 676655 5899999999999987777899999999999999999988888999999
Q ss_pred CCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCc-ccccCccccccccccCC-cccccCCCCCCCCcccccc
Q 005102 137 YLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPN-GFGSGLVSLEKLNLSFN-KFNGSIPSNTGNLSSLQGT 214 (714)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~~ 214 (714)
+|++|+|++|++++..+..|.++++|++|+|++|+++ .+|. ..+..+++|+.|++++| .+.+..|..+.++++|+ .
T Consensus 101 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~-~ 178 (353)
T 2z80_A 101 SLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE-E 178 (353)
T ss_dssp TCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE-E
T ss_pred CCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC-E
Confidence 9999999999999544445899999999999999998 5776 44467999999999999 47766678899999999 9
Q ss_pred cccccccCCcCcCccccCCCCcccccCcCCcCCCCC
Q 005102 215 VDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPI 250 (714)
Q Consensus 215 l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~ 250 (714)
|++++|.+++..|..++.+++|+.|++++|+++...
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 214 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLL 214 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHH
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccccch
Confidence 999999999999999999999999999999986543
No 324
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.81 E-value=5.7e-20 Score=211.42 Aligned_cols=205 Identities=22% Similarity=0.214 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCC---CCCcc----cceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCc
Q 005102 40 EGSLSNWNSSDE---NPCSW----NGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFF 101 (714)
Q Consensus 40 ~~~l~~w~~~~~---~~c~w----~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~ 101 (714)
...++.|+.+-+ +||.+ ..|.|.. ..++.|+|++|+|++..|.+|.++++|++|+|++|+|+
T Consensus 10 ~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~ 89 (635)
T 4g8a_A 10 DDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 89 (635)
T ss_dssp ---------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred cchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC
Confidence 345666664422 34543 2466752 24555666666666555555666666666666666666
Q ss_pred ccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCC-CCCccc
Q 005102 102 GSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG-PLPNGF 180 (714)
Q Consensus 102 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~ 180 (714)
+..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|..+
T Consensus 90 ~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 5555556666666666666666654444455666666666666666654444455666666666666666653 233333
Q ss_pred ccCccccccccccCCcccccCCCCCCCCcccc---cccccccccCCcCcCccccCCCCcccccCcCCcC
Q 005102 181 GSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQ---GTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNL 246 (714)
Q Consensus 181 ~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~---~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 246 (714)
..+++|+.|+|++|+|++..|..+..+.++. ..++++.|.++...+..+.. ..+..+++.+|..
T Consensus 170 -~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~ 236 (635)
T 4g8a_A 170 -SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFD 236 (635)
T ss_dssp -GGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCS
T ss_pred -ccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhcccc
Confidence 3456666666666666655555544433322 13445555555433333322 2344455555543
No 325
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.2e-19 Score=179.56 Aligned_cols=157 Identities=24% Similarity=0.256 Sum_probs=112.5
Q ss_pred CCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcc
Q 005102 52 NPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNE 131 (714)
Q Consensus 52 ~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 131 (714)
+.|.|..|.|. +++++. +|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..
T Consensus 9 C~C~~~~v~c~----------~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 75 (220)
T 2v9t_B 9 CTCSNNIVDCR----------GKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 75 (220)
T ss_dssp SEEETTEEECT----------TSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT
T ss_pred CEECCCEEEcC----------CCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH
Confidence 44677777775 344443 455443 67888888888888777777888888888888888888777888
Q ss_pred cCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccc
Q 005102 132 IGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSL 211 (714)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 211 (714)
|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|++++..|..+ ..+++|+.|+|++|+|++..+..+..+++|
T Consensus 76 ~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAF-QDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-TTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHc-CCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 8888888888888888874444456777788888888888775555544 457777777777777775555556666666
Q ss_pred ccccccccccCC
Q 005102 212 QGTVDFSHNLFS 223 (714)
Q Consensus 212 ~~~l~l~~N~l~ 223 (714)
+ .+++++|++.
T Consensus 155 ~-~L~L~~N~~~ 165 (220)
T 2v9t_B 155 Q-TMHLAQNPFI 165 (220)
T ss_dssp C-EEECCSSCEE
T ss_pred C-EEEeCCCCcC
Confidence 6 6666666665
No 326
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.1e-19 Score=179.70 Aligned_cols=154 Identities=23% Similarity=0.263 Sum_probs=139.9
Q ss_pred CEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccC
Q 005102 91 RHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQN 170 (714)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 170 (714)
+.+++++|.++ .+|..+. ++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57889999998 5776654 68999999999999877789999999999999999999888999999999999999999
Q ss_pred cCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 171 NFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 171 ~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
+|+ .+|..++.++++|+.|+|++|+|++..|..+..+++|+ .|+|++|+|++..+..|..+++|+.|++++|.+...
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN-LLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCC-EEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 998 67777667799999999999999988899999999999 999999999988888899999999999999999753
No 327
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=4.3e-21 Score=213.15 Aligned_cols=181 Identities=21% Similarity=0.182 Sum_probs=150.7
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCCh----------------hhcCCCCCCEEEcCCCcCcc
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPL----------------ELLEAQGLQSLVLYGNSFSG 126 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~L~~N~l~g 126 (714)
...++.|+|++|.+++..| |+.+++|++|+|++|.|++..+. ....+++|+.|+|++|.+++
T Consensus 57 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 4577888888888887665 77788888777777777643211 01235789999999999998
Q ss_pred cCCcccCCCCCCCEEeccCccCCCCCCcccc-cccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCC
Q 005102 127 SVPNEIGKLKYLQILDLSQNFFNGSLPVSIV-QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNT 205 (714)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 205 (714)
..|..++++++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++. |... .+++|+.|+|++|+|++ +|..+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~--~l~~L~~L~Ls~N~l~~-~~~~~ 210 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQV--VFAKLKTLDLSSNKLAF-MGPEF 210 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCC--CCTTCCEEECCSSCCCE-ECGGG
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccc--cCCCCCEEECCCCCCCC-CCHhH
Confidence 8899999999999999999999998888886 799999999999999864 4433 48999999999999996 55569
Q ss_pred CCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCC-CCCC
Q 005102 206 GNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLS-GPIP 251 (714)
Q Consensus 206 ~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~-~~~p 251 (714)
..+++|+ .|++++|.|++ +|..+..+++|+.|++++|.+. +.+|
T Consensus 211 ~~l~~L~-~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 211 QSAAGVT-WISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp GGGTTCS-EEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred cCCCCcc-EEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 9999999 99999999995 7888999999999999999998 4444
No 328
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=178.78 Aligned_cols=156 Identities=21% Similarity=0.196 Sum_probs=139.7
Q ss_pred CEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC-cccCCCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 91 RHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-NEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..| ..|..+++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58999999998 5777654 457899999999997755 4589999999999999999987778999999999999999
Q ss_pred CcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 170 NNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
|++++..|..+ .++++|+.|+|++|+|++..|..+..+++|+ .|+|++|+|++..|..|..+++|+.|++++|.+++.
T Consensus 91 N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMF-KGLESLKTLMLRSNRITCVGNDSFIGLSSVR-LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGG-TTCSSCCEEECTTSCCCCBCTTSSTTCTTCS-EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHh-cCCcCCCEEECCCCcCCeECHhHcCCCccCC-EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99996555445 5799999999999999988899999999999 999999999999999999999999999999999976
Q ss_pred CC
Q 005102 250 IP 251 (714)
Q Consensus 250 ~p 251 (714)
.+
T Consensus 169 c~ 170 (220)
T 2v70_A 169 CY 170 (220)
T ss_dssp GG
T ss_pred Cc
Confidence 55
No 329
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.79 E-value=2.5e-19 Score=186.92 Aligned_cols=172 Identities=24% Similarity=0.372 Sum_probs=118.7
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|++.+++++. +| .+..+++|++|+|++|.+++..+ +..+++|+.|+|++|.+++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 366777777777765 33 57777777777777777774333 7777777777777777764 33 5777777777777
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|++++ +|. +..+++|+.|+|++|.+++ ++. + ..+++|+.|+|++|++++ ++. +..+++|+ .|++++|.++
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l-~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~-~L~l~~n~l~ 186 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-L-AGLTNLQYLSIGNAQVSD-LTP-LANLSKLT-TLKADDNKIS 186 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-G-GGCTTCCEEECCSSCCCC-CGG-GTTCTTCC-EEECCSSCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-c-cCCCCccEEEccCCcCCC-Chh-hcCCCCCC-EEECCCCccC
Confidence 7777764 333 6777777777777777764 333 3 357777777777777774 333 66777777 7777777777
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
+..+ +..+++|+.|++++|++++..|
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~ 212 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP 212 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc
Confidence 5443 6777777777777777776653
No 330
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.79 E-value=2e-19 Score=191.27 Aligned_cols=199 Identities=18% Similarity=0.183 Sum_probs=163.1
Q ss_pred CCCcccceEecC-----------CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCCh-hhcCCCCCCE-EE
Q 005102 52 NPCSWNGITCKE-----------QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPL-ELLEAQGLQS-LV 118 (714)
Q Consensus 52 ~~c~w~gv~c~~-----------~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~ 118 (714)
|-|+|+.|.|+. ..++.|+|++|+|+...+.+|.+|++|++|+|++|++.+.+|. .|.++++|+. +.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 457899999973 3578899999999987777899999999999999999877765 5678888774 77
Q ss_pred cCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccC-cCCCCCCcccccCc-cccccccccCCc
Q 005102 119 LYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQN-NFTGPLPNGFGSGL-VSLEKLNLSFNK 196 (714)
Q Consensus 119 L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~~l-~~L~~L~l~~N~ 196 (714)
+++|+++...|..|..+++|+.|++++|++++..+..+....++..|+++++ ++. .+|...+..+ ..|+.|+|++|+
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccc
Confidence 7889999888889999999999999999999766667777788899999764 555 5665443444 468899999999
Q ss_pred ccccCCCCCCCCccccccccccc-ccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 197 FNGSIPSNTGNLSSLQGTVDFSH-NLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 197 l~g~~p~~~~~l~~L~~~l~l~~-N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
|+ .+|.......+++ .+++++ |.++...+..|..+++|+.||+++|+|+..++..
T Consensus 166 i~-~i~~~~f~~~~L~-~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~ 221 (350)
T 4ay9_X 166 IQ-EIHNSAFNGTQLD-ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG 221 (350)
T ss_dssp CC-EECTTSSTTEEEE-EEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS
T ss_pred cc-CCChhhccccchh-HHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh
Confidence 99 7777777788898 889875 5666444457899999999999999999776654
No 331
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1e-19 Score=184.55 Aligned_cols=132 Identities=19% Similarity=0.187 Sum_probs=104.3
Q ss_pred ccccccCceEEEEEEE-CCCcE--EEEEEeCCCCch------------------------hHHHHHHHHHHHhccCCCCc
Q 005102 409 FVLGKSGIGIVYKVVL-EDGHT--LAVRRLGEGGSQ------------------------RFKEFQTEVEAIGKIRHSNI 461 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~ni 461 (714)
..||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+++|.+++|+++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5799999999999998 67988 999987653111 11368899999999998864
Q ss_pred --cceEEEEEeCCceeEEEeccCC-C----CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCceecC
Q 005102 462 --VTLRAYYWSVDEKLLIYDYIPN-G----SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLH-EFSPKKYVHGD 533 (714)
Q Consensus 462 --v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~ivHrD 533 (714)
..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| + .+|+|||
T Consensus 133 ~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 133 SVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp CCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 344432 367899999942 4 66665421 234467889999999999999 8 8999999
Q ss_pred CCCCCeeeCCCCCeEEcccchhhhh
Q 005102 534 LKPSNILLGHNMEPHVSDFGLARLA 558 (714)
Q Consensus 534 lkp~NILl~~~~~~kl~DFGla~~~ 558 (714)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 332
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=8e-20 Score=195.17 Aligned_cols=174 Identities=24% Similarity=0.232 Sum_probs=141.9
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhc-CCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCcc
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELL-EAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNF 147 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 147 (714)
+++++++|+. +|..+. ..|+.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 23 l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 4445666665 565554 4589999999999987777777 89999999999999998777889999999999999999
Q ss_pred CCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCC----CCCcccccccccccccCC
Q 005102 148 FNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNT----GNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 148 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~----~~l~~L~~~l~l~~N~l~ 223 (714)
|++..+..|..+++|+.|+|++|+|++..|..+ .++++|+.|+|++|+|+ .+|..+ .++++|+ .|+|++|+|+
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~-~L~L~~N~l~ 176 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAF-EDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLM-LLDLSSNKLK 176 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTT-TTCTTCCEEECCSSCCC-SCCGGGTC----CTTCC-EEECCSSCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHh-CCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCC-EEECCCCCCC
Confidence 987767788999999999999999986556655 56999999999999999 456544 5688898 9999999999
Q ss_pred cCcCccccCCCCc--ccccCcCCcCCC
Q 005102 224 GSIPASLGNLPEK--VYIDLTYNNLSG 248 (714)
Q Consensus 224 g~~p~~~~~l~~L--~~l~l~~N~l~~ 248 (714)
+..+..+..++.+ +.|++++|.+..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccC
Confidence 7666778888874 789999998874
No 333
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=5.6e-19 Score=175.83 Aligned_cols=156 Identities=22% Similarity=0.230 Sum_probs=139.1
Q ss_pred CCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 90 LRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
.+.++.+++.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 457889999887 6776554 8999999999999998899999999999999999999855556689999999999999
Q ss_pred CcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 170 NNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
|+|++ +|...+..+++|+.|+|++|+|+ .+|..+..+++|+ .|+|++|+|++..+..|..+++|+.|++++|.+.+.
T Consensus 98 N~l~~-l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLTV-LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLT-HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCS-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCCc-cChhHhCcchhhCeEeccCCccc-ccCcccccCCCCC-EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 99995 55554467999999999999999 8999999999999 999999999988778899999999999999999977
Q ss_pred CC
Q 005102 250 IP 251 (714)
Q Consensus 250 ~p 251 (714)
.+
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 65
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.79 E-value=2.1e-19 Score=180.27 Aligned_cols=175 Identities=18% Similarity=0.207 Sum_probs=152.4
Q ss_pred CCcEEEEEcCCCC-ccccCCccccCCCCCCEEEccC-CCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCC-
Q 005102 63 EQRVVSVSIPKKK-LLGFLPSALGSLTDLRHVNLRN-NKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQ- 139 (714)
Q Consensus 63 ~~~~~~l~l~~~~-l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~- 139 (714)
..+++.|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|+.|+|++|.+++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3589999999997 8887777999999999999999 99998777889999999999999999996 776 88999998
Q ss_pred --EEeccCc-cCCCCCCcccccccccc-eeecccCcCCCCCCcccccCccccccccccCCc-ccccCCCCCCCC-ccccc
Q 005102 140 --ILDLSQN-FFNGSLPVSIVQCKRLK-ALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNK-FNGSIPSNTGNL-SSLQG 213 (714)
Q Consensus 140 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l-~~L~~ 213 (714)
.|+|++| ++++..+..|..+++|+ .|+|++|+++ .+|...+.. ++|+.|+|++|+ +++..+..+..+ ++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~- 208 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPS- 208 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCS-
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCc-
Confidence 9999999 99866667799999999 9999999998 788776654 899999999995 996666788899 9999
Q ss_pred ccccccccCCcCcCccccCCCCcccccCcCCc
Q 005102 214 TVDFSHNLFSGSIPASLGNLPEKVYIDLTYNN 245 (714)
Q Consensus 214 ~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 245 (714)
.+++++|++++ +|.. .+++|+.|+++++.
T Consensus 209 ~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 209 LLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp EEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred EEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 99999999995 4543 67788888887753
No 335
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.79 E-value=1.6e-19 Score=204.23 Aligned_cols=184 Identities=20% Similarity=0.212 Sum_probs=164.2
Q ss_pred eEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCC
Q 005102 59 ITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYL 138 (714)
Q Consensus 59 v~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 138 (714)
..|....+ .+.++++++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|
T Consensus 2 ~~C~~~~~--c~~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp CEECTTSE--EECTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCCce--EECCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 35765555 7888999884 676664 799999999999999999999999999999999999999888999999999
Q ss_pred CEEeccCccCCCCCCcccccccccceeecccCcCCC-CCCcccccCccccccccccCCcccccCC-CCCCCCcccccccc
Q 005102 139 QILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG-PLPNGFGSGLVSLEKLNLSFNKFNGSIP-SNTGNLSSLQGTVD 216 (714)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~~l~ 216 (714)
++|+|++|++++..|..|.++++|++|+|++|.+++ .+|..+ ..+++|+.|++++|++.+.+| ..+.++++|+ .|+
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~-~L~ 154 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF-PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLN-ELE 154 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSC-TTCTTCCEEEEEESSSCCEECTTTTTTCCEEE-EEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhh-hccCCccEEECCCCccccccCHhhhhcccccC-eee
Confidence 999999999997777779999999999999999986 456666 569999999999999666776 6899999999 999
Q ss_pred cccccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 217 FSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 217 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
+++|.+++.+|..++.+++|+.|++++|.+...
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~ 187 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFL 187 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBSTTH
T ss_pred ccCCcccccChhhhhccccCceEecccCccccc
Confidence 999999999999999999999999999998643
No 336
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.79 E-value=4.1e-19 Score=185.24 Aligned_cols=172 Identities=20% Similarity=0.321 Sum_probs=150.9
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|+.|+|++|.+++ +|. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 4689999999999998655 9999999999999999986 34 68999999999999999985 444 99999999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++++. +. +..+++|+.|+|++|++++ ++. + ..+++|+.|+|++|++++..+ +..+++|+ .|++++|++
T Consensus 136 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l-~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~-~L~L~~N~l 207 (308)
T 1h6u_A 136 LDLNQITNI-SP-LAGLTNLQYLSIGNAQVSD-LTP-L-ANLSKLTTLKADDNKISDISP--LASLPNLI-EVHLKNNQI 207 (308)
T ss_dssp CCSSCCCCC-GG-GGGCTTCCEEECCSSCCCC-CGG-G-TTCTTCCEEECCSSCCCCCGG--GGGCTTCC-EEECTTSCC
T ss_pred CCCCccCcC-cc-ccCCCCccEEEccCCcCCC-Chh-h-cCCCCCCEEECCCCccCcChh--hcCCCCCC-EEEccCCcc
Confidence 999999854 43 8899999999999999985 555 4 569999999999999995443 88899999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGPI 250 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~ 250 (714)
++..| +..+++|+.|++++|++++..
T Consensus 208 ~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 208 SDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred Ccccc--ccCCCCCCEEEccCCeeecCC
Confidence 97664 899999999999999998743
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.78 E-value=5.1e-19 Score=198.30 Aligned_cols=164 Identities=25% Similarity=0.311 Sum_probs=143.5
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|++|.|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 46899999999999 577 568999999999999997 777 665 99999999999996 777 6899999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccc-------ccccc
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSL-------QGTVD 216 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L-------~~~l~ 216 (714)
++|+|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| + .|+
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~---~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~-~L~ 213 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP---ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEI-FFR 213 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC---TTCCEEECCSSCCS-SCCC-CC----------CCE-EEE
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh---CCCCEEECcCCCCC-chhh-HHH--hhhcccccce-EEe
Confidence 9999996 776 57899999999999996 888 53 89999999999999 8888 654 66 7 999
Q ss_pred cccccCCcCcCccccCCCCcccccCcCCcCCCCCCCCc
Q 005102 217 FSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNG 254 (714)
Q Consensus 217 l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 254 (714)
|++|+|+ .+|..+..+++|+.|++++|+|++.+|...
T Consensus 214 Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 214 CRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp CCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred cCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 9999999 689989899999999999999999887653
No 338
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.3e-18 Score=179.91 Aligned_cols=171 Identities=22% Similarity=0.302 Sum_probs=149.0
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|.+++ +| .+..+++|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4788999999999875 3 58999999999999999996544 8999999999999999985 44 4999999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|++++ + +.+..+++|+.|+|++|++++ + ..+ ..+++|+.|+|++|++++..| +..+++|+ .|++++|.++
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l-~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~-~L~L~~N~i~ 191 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVL-SRLTKLDTLSLEDNQISDIVP--LAGLTKLQ-NLYLSKNHIS 191 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCC-C-GGG-GGCTTCSEEECCSSCCCCCGG--GTTCTTCC-EEECCSSCCC
T ss_pred CCCcCCC-C-hhhcCCCCCCEEEccCCcCCc-c-hhh-ccCCCCCEEEccCCccccchh--hcCCCccC-EEECCCCcCC
Confidence 9999985 3 578899999999999999985 4 344 469999999999999996555 88999999 9999999999
Q ss_pred cCcCccccCCCCcccccCcCCcCCCCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLSGPI 250 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~~~~ 250 (714)
+ +| .+..+++|+.|++++|+++...
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 6 44 4999999999999999998643
No 339
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.77 E-value=2.3e-19 Score=188.01 Aligned_cols=176 Identities=17% Similarity=0.160 Sum_probs=152.1
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
...++.|+|++|++++.. ..++|++|++++|++++..+.. +++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 79 l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp CTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred cCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 468999999999998743 3489999999999999765543 67899999999999988888999999999999
Q ss_pred ccCccCCCCCCcccc-cccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccccccccccc
Q 005102 143 LSQNFFNGSLPVSIV-QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNL 221 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~ 221 (714)
|++|++++..|..+. .+++|++|+|++|.+++ +|... .+++|+.|+|++|+++ .+|..+..+++|+ .|++++|+
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~--~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~-~L~L~~N~ 225 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQV--VFAKLKTLDLSSNKLA-FMGPEFQSAAGVT-WISLRNNK 225 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECCC--CCTTCCEEECCSSCCC-EECGGGGGGTTCS-EEECTTSC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccccc--ccccCCEEECCCCcCC-cchhhhcccCccc-EEECcCCc
Confidence 999999987777774 78999999999999984 45443 3899999999999999 5666799999999 99999999
Q ss_pred CCcCcCccccCCCCcccccCcCCcCC-CCCCC
Q 005102 222 FSGSIPASLGNLPEKVYIDLTYNNLS-GPIPQ 252 (714)
Q Consensus 222 l~g~~p~~~~~l~~L~~l~l~~N~l~-~~~p~ 252 (714)
|+ .+|..+..+++|+.|++++|+++ +.+|.
T Consensus 226 l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 226 LV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred cc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 99 57889999999999999999998 54443
No 340
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=5.2e-19 Score=188.88 Aligned_cols=179 Identities=23% Similarity=0.186 Sum_probs=148.4
Q ss_pred CEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccC-CCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 91 RHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIG-KLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
+.+++++|.|+ .+|..+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57899999998 5776654 4589999999999988888887 999999999999999987778899999999999999
Q ss_pred CcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccc---cCCCCcccccCcCCcC
Q 005102 170 NNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASL---GNLPEKVYIDLTYNNL 246 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~---~~l~~L~~l~l~~N~l 246 (714)
|+|++ +|...+.++++|+.|+|++|+|++..|..|.++++|+ .|+|++|+|++..+..| ..+++|+.|+|++|+|
T Consensus 98 N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~-~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 98 NHLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQ-KLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CcCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCC-EEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 99984 5554446799999999999999988899999999999 99999999996555555 6799999999999999
Q ss_pred CCCCCCCccccC---CCCcccccCCCCCCCC
Q 005102 247 SGPIPQNGALMN---RGPTAFIGNPRLCGPP 274 (714)
Q Consensus 247 ~~~~p~~~~~~~---~~~~~~~~n~~~~~~~ 274 (714)
++..+....... .....+.+|++.|.+.
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 976654332221 1345677899888764
No 341
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.76 E-value=1.1e-17 Score=184.17 Aligned_cols=162 Identities=17% Similarity=0.212 Sum_probs=82.5
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
+++.|+|++|++++. | ++.+++|++|+|++|.|++. | +..+++|++|+|++|++++ +| ++.+++|+.|+++
T Consensus 65 ~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 65 GLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 444455555554442 2 44455555555555555432 2 4445555555555555543 22 4455555555555
Q ss_pred CccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSG 224 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g 224 (714)
+|++++ +| +..+++|++|++++|+..+.++ + ..+++|+.|++++|++++ +| ++.+++|+ .|++++|++++
T Consensus 136 ~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--~-~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~-~L~l~~N~l~~ 205 (457)
T 3bz5_A 136 RNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--V-TPQTQLTTLDCSFNKITE-LD--VSQNKLLN-RLNCDTNNITK 205 (457)
T ss_dssp TSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--C-TTCTTCCEEECCSSCCCC-CC--CTTCTTCC-EEECCSSCCSC
T ss_pred CCccce-ec--cccCCcCCEEECCCCCcccccc--c-ccCCcCCEEECCCCccce-ec--cccCCCCC-EEECcCCcCCe
Confidence 555543 22 4444555555555554433442 2 235556666666666653 44 55555555 66666666654
Q ss_pred CcCccccCCCCcccccCcCCcCCC
Q 005102 225 SIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 225 ~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
. .++.+++|+.|++++|++++
T Consensus 206 ~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 206 L---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp C---CCTTCTTCSEEECCSSCCSC
T ss_pred e---ccccCCCCCEEECcCCcccc
Confidence 3 25566666666666666665
No 342
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.75 E-value=1.2e-17 Score=183.78 Aligned_cols=166 Identities=19% Similarity=0.197 Sum_probs=149.2
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++. | .++.+++|++|+|++|++++. | +..+++|++|+|++|.+++. | ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 35889999999999985 5 799999999999999999974 4 88999999999999999974 4 99999999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++++ +| +..+++|++|++++|++++ +| + ..+++|+.|++++|+..+.+ .++.+++|+ .|++++|++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l-~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~-~L~ls~n~l 182 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--V-SHNTQLTELDCHLNKKITKL--DVTPQTQLT-TLDCSFNKI 182 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--C-TTCTTCCEEECTTCSCCCCC--CCTTCTTCC-EEECCSSCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--c-ccCCcCCEEECCCCCccccc--ccccCCcCC-EEECCCCcc
Confidence 99999996 55 8999999999999999996 54 4 46899999999999877777 478899999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
++ +| ++.+++|+.|++++|++++.
T Consensus 183 ~~-l~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 183 TE-LD--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp CC-CC--CTTCTTCCEEECCSSCCSCC
T ss_pred ce-ec--cccCCCCCEEECcCCcCCee
Confidence 97 55 89999999999999999986
No 343
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.75 E-value=2.4e-18 Score=197.81 Aligned_cols=207 Identities=20% Similarity=0.201 Sum_probs=162.5
Q ss_pred cEEEEEcCCCCcc--ccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCC-cccCCCCCCCEE
Q 005102 65 RVVSVSIPKKKLL--GFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVP-NEIGKLKYLQIL 141 (714)
Q Consensus 65 ~~~~l~l~~~~l~--g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L 141 (714)
.++.+++++|.+. +..+..+..+.+|+.|+++.|.+.+ ++..+..+++|+.+++++|.+....+ ..+.++.+|+.+
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccc
Confidence 4445555555553 2344445555556666666655542 34456667778888888777765554 357889999999
Q ss_pred eccCccCCCCCCcccccccccceeecccCcCCCC-CCcccccCccccccccccCCcccccCCCCCCCCcccccccccccc
Q 005102 142 DLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGP-LPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHN 220 (714)
Q Consensus 142 ~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N 220 (714)
+++.|.+.+..|..+..+++|+.|+|++|++... +|..+ ..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~-~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~-~L~Ls~N 528 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF-TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ-VLNMSHN 528 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC-TTCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEECTTS
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhh-hhccccCEEECCCCccCCcChHHHcCCCCCC-EEECCCC
Confidence 9999999998899999999999999999986544 45555 5799999999999999999999999999999 9999999
Q ss_pred cCCcCcCccccCCCCcccccCcCCcCCCCCCCCcccc--CCCCcccccCCCCCCCC
Q 005102 221 LFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALM--NRGPTAFIGNPRLCGPP 274 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~--~~~~~~~~~n~~~~~~~ 274 (714)
+|++..|..|..+++|+.||+++|+|++.+|...... ........+||+.|.|.
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999999999999999999876533 34456678999999775
No 344
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=4.3e-18 Score=192.87 Aligned_cols=174 Identities=22% Similarity=0.280 Sum_probs=152.0
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
...++.|+|++|.+... | .|..|++|+.|+|++|+|++..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 35678899999998764 4 69999999999999999997555 8999999999999999985 44 799999999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|+|++ + +.+..|++|+.|+|++|++++ + ..+ ..+++|+.|+|++|+|++..| +..+++|+ .|+|++|+|
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l-~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~-~L~Ls~N~i 187 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVL-SRLTKLDTLSLEDNQISDIVP--LAGLTKLQ-NLYLSKNHI 187 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGG-GSCTTCSEEECCSSCCCCCGG--GTTCTTCC-EEECCSSCC
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhh-cccCCCCEEECcCCcCCCchh--hccCCCCC-EEECcCCCC
Confidence 99999985 4 468999999999999999985 4 345 469999999999999997766 89999999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCCCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGPIPQ 252 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 252 (714)
++. ..+..+++|+.|+|++|++++.+..
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred CCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 974 4699999999999999999976543
No 345
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.75 E-value=4.1e-18 Score=188.53 Aligned_cols=171 Identities=28% Similarity=0.377 Sum_probs=97.4
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
+++.|++++|.+++..| ++.+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|+
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 273 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC
Confidence 45555555555554433 44455555555555555432 235555566666666666654333 5566666666666
Q ss_pred CccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSG 224 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g 224 (714)
+|++++..| +..+++|+.|+|++|++++..| + ..+++|+.|+|++|++++..| +..+++|+ .|++++|.+++
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~-~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~-~L~l~~n~l~~ 345 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLEDISP--I-SNLKNLTYLTLYFNNISDISP--VSSLTKLQ-RLFFYNNKVSD 345 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--G-GGCTTCSEEECCSSCCSCCGG--GGGCTTCC-EEECCSSCCCC
T ss_pred CCccCcccc--ccCCCccCeEEcCCCcccCchh--h-cCCCCCCEEECcCCcCCCchh--hccCccCC-EeECCCCccCC
Confidence 666654322 5556666666666666654322 2 345666666666666665444 45566666 66666666665
Q ss_pred CcCccccCCCCcccccCcCCcCCCCCC
Q 005102 225 SIPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 225 ~~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
. ..+..+++|+.|++++|++++.+|
T Consensus 346 ~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 346 V--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred c--hhhccCCCCCEEeCCCCccCccch
Confidence 4 356666666666666666666655
No 346
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=3.6e-19 Score=206.77 Aligned_cols=155 Identities=25% Similarity=0.307 Sum_probs=127.9
Q ss_pred cCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCccccc
Q 005102 79 FLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQ 158 (714)
Q Consensus 79 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 158 (714)
..|..+..++.|+.|+|++|.+. .+|..++.+++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|+ .+|..|..
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 45788999999999999999998 78888999999999999999999 99999999999999999999999 88999999
Q ss_pred ccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCccc
Q 005102 159 CKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVY 238 (714)
Q Consensus 159 l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~ 238 (714)
|++|+.|+|++|.|+ .+|..+ ..|++|+.|+|++|+|++.+|..+..+......++|++|.++|.+|..+. .
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~------~ 363 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEF-GNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR------F 363 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSST-TSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------
T ss_pred CCCCCEEECCCCCCC-ccChhh-hcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc------e
Confidence 999999999999997 899987 46999999999999999999988876544332578999999999997654 5
Q ss_pred ccCcCC
Q 005102 239 IDLTYN 244 (714)
Q Consensus 239 l~l~~N 244 (714)
|+++.|
T Consensus 364 l~l~~n 369 (727)
T 4b8c_D 364 IEINTD 369 (727)
T ss_dssp ------
T ss_pred eEeecc
Confidence 566666
No 347
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.74 E-value=4.1e-18 Score=180.84 Aligned_cols=174 Identities=22% Similarity=0.320 Sum_probs=95.2
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCc-------------------
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFS------------------- 125 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------------- 125 (714)
+++.|++++|...+.++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.++
T Consensus 133 ~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n 209 (347)
T 4fmz_A 133 KMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVN 209 (347)
T ss_dssp TCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSS
T ss_pred ceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccC
Confidence 455555555544433332 5555555555555555543222 444455555555555544
Q ss_pred ---ccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCC
Q 005102 126 ---GSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202 (714)
Q Consensus 126 ---g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p 202 (714)
+..+ +..+++|+.|+|++|++++ +|. +..+++|++|++++|.+++ ++ .+ ..+++|+.|++++|++++ +
T Consensus 210 ~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~-~~-~~l~~L~~L~l~~n~l~~-~- 280 (347)
T 4fmz_A 210 QITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-IN-AV-KDLTKLKMLNVGSNQISD-I- 280 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GG-TTCTTCCEEECCSSCCCC-C-
T ss_pred CCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-Ch-hH-hcCCCcCEEEccCCccCC-C-
Confidence 2222 4555566666666666653 222 5556666666666666653 32 22 345666666666666663 3
Q ss_pred CCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCC
Q 005102 203 SNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIP 251 (714)
Q Consensus 203 ~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p 251 (714)
..+..+++|+ .|++++|.+++..|..++.+++|+.|++++|++++.+|
T Consensus 281 ~~~~~l~~L~-~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 281 SVLNNLSQLN-SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGGGGCTTCS-EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred hhhcCCCCCC-EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 2355566666 66666666666666666666666666666666666555
No 348
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.1e-18 Score=167.41 Aligned_cols=128 Identities=16% Similarity=0.255 Sum_probs=63.9
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
+++.|++++|+++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|.+++..|..++.+++|+.|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4455555555555 233 3555555555555555443 22344555555555555555555455555555555555555
Q ss_pred CccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 145 QNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
+|++++..|..+..+++|++|+|++|++.+.+| .+ ..+++|+.|++++|+++
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l-~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PL-KTLPELKSLNIQFDGVH 172 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GG-GGCSSCCEEECTTBCCC
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hh-cCCCCCCEEECCCCCCc
Confidence 555554445555555555555555554222343 22 23444444444444444
No 349
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=6.2e-18 Score=163.39 Aligned_cols=177 Identities=21% Similarity=0.243 Sum_probs=133.7
Q ss_pred CCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCCh-hhcCCCCCCEEEcCCCcCcccCCc
Q 005102 52 NPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPL-ELLEAQGLQSLVLYGNSFSGSVPN 130 (714)
Q Consensus 52 ~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~g~~p~ 130 (714)
+.|.|+.|.| ++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|.
T Consensus 6 C~C~~~~l~~----------s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 72 (192)
T 1w8a_A 6 CHCEGTTVDC----------TGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN 72 (192)
T ss_dssp SEEETTEEEC----------TTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT
T ss_pred CEECCCEEEc----------CCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHh
Confidence 3456765555 456663 56766644 899999999999977665 488999999999999999998899
Q ss_pred ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc
Q 005102 131 EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS 210 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 210 (714)
.|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.+|..+ ..+++|+.|+|++|.+++..+... +..
T Consensus 73 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~c~c~l~~--~~~ 149 (192)
T 1w8a_A 73 AFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSF-EHLNSLTSLNLASNPFNCNCHLAW--FAE 149 (192)
T ss_dssp TTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSS-TTCTTCCEEECTTCCBCCSGGGHH--HHH
T ss_pred HcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHh-hcCCCCCEEEeCCCCccCcCcchH--HHH
Confidence 99999999999999999998888889999999999999999998778777 468999999999999997665211 111
Q ss_pred -cccccccccccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 211 -LQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 211 -L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
+. ...+..+......|.. +......++..+.+.-
T Consensus 150 ~l~-~~~~~~~~~~C~~P~~---l~~~~l~~l~~~~~~C 184 (192)
T 1w8a_A 150 WLR-KKSLNGGAARCGAPSK---VRDVQIKDLPHSEFKC 184 (192)
T ss_dssp HHH-HHCCSGGGCBBCSSTT---TTTSBGGGSCTTTCCC
T ss_pred HHH-HcCCCCCCCCCCCChH---HcCCChhhCcHhhcCc
Confidence 11 2223334444344444 4445667777777753
No 350
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.73 E-value=8.5e-18 Score=185.98 Aligned_cols=172 Identities=28% Similarity=0.346 Sum_probs=153.3
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++. +.+..+++|++|+|++|.+++..| +..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 45789999999999874 468999999999999999997655 8899999999999999996544 89999999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++++..| +..+++|+.|+|++|++++..| + ..+++|+.|++++|++++. ..+.++++|+ .|++++|++
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~-~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~-~L~l~~n~l 365 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--V-SSLTKLQRLFFYNNKVSDV--SSLANLTNIN-WLSAGHNQI 365 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--G-GGCTTCCEEECCSSCCCCC--GGGTTCTTCC-EEECCSSCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--h-ccCccCCEeECCCCccCCc--hhhccCCCCC-EEeCCCCcc
Confidence 99999996544 8899999999999999997655 3 4689999999999999964 4788999999 999999999
Q ss_pred CcCcCccccCCCCcccccCcCCcCCCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSGPI 250 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~~~ 250 (714)
++..| +..+++|+.|++++|++++.+
T Consensus 366 ~~~~~--~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 366 SDLTP--LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp CBCGG--GTTCTTCCEEECCCEEEECCC
T ss_pred Cccch--hhcCCCCCEEeccCCcccCCc
Confidence 99888 899999999999999999854
No 351
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.73 E-value=6.7e-18 Score=179.21 Aligned_cols=170 Identities=22% Similarity=0.300 Sum_probs=142.3
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++. |. +..+++|+.|+|
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEEC
Confidence 466777777777765433 7777778888888887775443 78899999999999999854 44 999999999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
++|.+++ + +.+..+++|+.|++++|++++ +| .+ ..+++|+.|++++|++++..|..+..+++|+ .|++++|+++
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~-~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~-~L~L~~n~l~ 324 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VL-NNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT-TLFLSQNHIT 324 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GG-GGCTTCSEEECCSSCCCGGGHHHHHTCTTCS-EEECCSSSCC
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hh-cCCCCCCEEECcCCcCCCcChhHhhccccCC-EEEccCCccc
Confidence 9999985 4 568899999999999999985 44 34 4689999999999999998899999999999 9999999999
Q ss_pred cCcCccccCCCCcccccCcCCcCC
Q 005102 224 GSIPASLGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 224 g~~p~~~~~l~~L~~l~l~~N~l~ 247 (714)
+..| +..+++|+.|++++|.++
T Consensus 325 ~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 325 DIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCGG--GGGCTTCSEESSSCC---
T ss_pred cccC--hhhhhccceeehhhhccc
Confidence 8777 889999999999999986
No 352
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=7.8e-18 Score=163.43 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=135.9
Q ss_pred ccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccc
Q 005102 84 LGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLK 163 (714)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 163 (714)
...+++|++|++++|.++ .+| .+..+++|+.|+|++|.++ .+..+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 367789999999999998 667 6899999999999999775 445899999999999999999988899999999999
Q ss_pred eeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcC
Q 005102 164 ALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTY 243 (714)
Q Consensus 164 ~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 243 (714)
+|+|++|++++..|..+. .+++|+.|+|++|++.+.+| .+..+++|+ .|++++|.+++ ++ .+..+++|+.|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~-~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~-~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKIN-TLPKVNSIDLSYNGAITDIM-PLKTLPELK-SLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGGHHHHT-TCSSCCEEECCSCTBCCCCG-GGGGCSSCC-EEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHhHHHHh-hCCCCCEEEccCCCCccccH-hhcCCCCCC-EEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 999999999987777774 69999999999999444777 688999999 99999999996 44 789999999999999
Q ss_pred CcCCC
Q 005102 244 NNLSG 248 (714)
Q Consensus 244 N~l~~ 248 (714)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 99864
No 353
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.2e-18 Score=173.21 Aligned_cols=168 Identities=24% Similarity=0.258 Sum_probs=138.4
Q ss_pred EEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccC
Q 005102 66 VVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQ 145 (714)
Q Consensus 66 ~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 145 (714)
++.+++.++.+++.. .+..+++|++|++++|.++ .+| .+..+++|+.|+|++|++++. |. +..+++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCC
Confidence 444567777777644 5788899999999999998 456 688899999999999999854 44 89999999999999
Q ss_pred ccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcC
Q 005102 146 NFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGS 225 (714)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~ 225 (714)
|++++ +|.... ++|+.|+|++|++++ +| .+ ..+++|+.|+|++|++++ +| .+..+++|+ .|++++|++++.
T Consensus 95 N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l-~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~-~L~L~~N~i~~~ 165 (263)
T 1xeu_A 95 NRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SL-IHLKNLEILSIRNNKLKS-IV-MLGFLSKLE-VLDLHGNEITNT 165 (263)
T ss_dssp SCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GG-TTCTTCCEEECTTSCCCB-CG-GGGGCTTCC-EEECTTSCCCBC
T ss_pred CccCC-cCcccc--CcccEEEccCCccCC-Ch-hh-cCcccccEEECCCCcCCC-Ch-HHccCCCCC-EEECCCCcCcch
Confidence 99985 554333 889999999999985 44 34 468999999999999985 44 688899999 999999999976
Q ss_pred cCccccCCCCcccccCcCCcCCCCC
Q 005102 226 IPASLGNLPEKVYIDLTYNNLSGPI 250 (714)
Q Consensus 226 ~p~~~~~l~~L~~l~l~~N~l~~~~ 250 (714)
..+..+++|+.|++++|++++..
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEECCC
T ss_pred --HHhccCCCCCEEeCCCCcccCCc
Confidence 67899999999999999998763
No 354
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=7.5e-18 Score=162.81 Aligned_cols=132 Identities=23% Similarity=0.330 Sum_probs=87.8
Q ss_pred CEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc-ccCCCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 91 RHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN-EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
+++++++|.|+ .+|..+.. +|+.|+|++|.+++..+. .|+.+++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57777777775 56655543 677777777777755543 367777777777777777766677777777777777777
Q ss_pred CcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcC
Q 005102 170 NNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIP 227 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p 227 (714)
|+|++..|..+ .++++|+.|+|++|+|++.+|..+..+++|+ .+++++|++++..+
T Consensus 88 N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMF-LGLHQLKTLNLYDNQISCVMPGSFEHLNSLT-SLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSS-TTCTTCCEEECCSSCCCEECTTSSTTCTTCC-EEECTTCCBCCSGG
T ss_pred CcCCccCHHHh-cCCCCCCEEECCCCcCCeeCHHHhhcCCCCC-EEEeCCCCccCcCc
Confidence 77765444444 3466677777777777666666666666666 66666666665443
No 355
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.71 E-value=3.2e-19 Score=188.48 Aligned_cols=179 Identities=23% Similarity=0.244 Sum_probs=151.4
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCccc-CChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGS-LPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
.+++.+++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|+.|+|++|.+++..|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5788889999998887665 66789999999999998866 888888999999999999999988888899999999999
Q ss_pred ccCc-cCCC-CCCcccccccccceeecccC-cCCCC-CCcccccCcc-ccccccccCC--ccc-ccCCCCCCCCcccccc
Q 005102 143 LSQN-FFNG-SLPVSIVQCKRLKALDLSQN-NFTGP-LPNGFGSGLV-SLEKLNLSFN--KFN-GSIPSNTGNLSSLQGT 214 (714)
Q Consensus 143 Ls~N-~l~g-~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~~~l~-~L~~L~l~~N--~l~-g~~p~~~~~l~~L~~~ 214 (714)
|++| .+++ .+|..+..+++|++|+|++| .+++. ++..+ ..++ +|+.|+|++| .++ +.+|..+.++++|+ .
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~-~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~-~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV-AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLV-H 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH-HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCS-E
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH-HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCC-E
Confidence 9999 6775 36777888999999999999 88753 45545 4588 9999999999 455 56777777888998 9
Q ss_pred ccccccc-CCcCcCccccCCCCcccccCcCCc
Q 005102 215 VDFSHNL-FSGSIPASLGNLPEKVYIDLTYNN 245 (714)
Q Consensus 215 l~l~~N~-l~g~~p~~~~~l~~L~~l~l~~N~ 245 (714)
|++++|. +++..+..++.+++|+.|++++|.
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 9999998 777888889999999999999996
No 356
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.71 E-value=1.7e-19 Score=194.61 Aligned_cols=184 Identities=20% Similarity=0.245 Sum_probs=141.3
Q ss_pred CCcEEEEEcCC---CCccccCCccc-------cCCCCCCEEEccCCCCcc----cCChhhcCCCCCCEEEcCCCcCcccC
Q 005102 63 EQRVVSVSIPK---KKLLGFLPSAL-------GSLTDLRHVNLRNNKFFG----SLPLELLEAQGLQSLVLYGNSFSGSV 128 (714)
Q Consensus 63 ~~~~~~l~l~~---~~l~g~~p~~~-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~g~~ 128 (714)
..+++.|+|++ +++++.+|..+ ..+++|++|+|++|.+++ .+|..+..+++|+.|+|++|.+++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 45788888887 46667777665 688889999999998887 47778888889999999999887544
Q ss_pred CcccC----CC---------CCCCEEeccCccCC-CCCC---cccccccccceeecccCcCC--C---CCCcccccCccc
Q 005102 129 PNEIG----KL---------KYLQILDLSQNFFN-GSLP---VSIVQCKRLKALDLSQNNFT--G---PLPNGFGSGLVS 186 (714)
Q Consensus 129 p~~~~----~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p~~~~~~l~~ 186 (714)
+..+. .+ ++|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+++ | .+|..+ ..+++
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l-~~~~~ 217 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGL-AYCQE 217 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTG-GGCTT
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHh-hcCCC
Confidence 44433 33 88899999999887 4455 46677888999999998886 2 233244 35788
Q ss_pred cccccccCCccc----ccCCCCCCCCcccccccccccccCCcC----cCccc--cCCCCcccccCcCCcCCC
Q 005102 187 LEKLNLSFNKFN----GSIPSNTGNLSSLQGTVDFSHNLFSGS----IPASL--GNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 187 L~~L~l~~N~l~----g~~p~~~~~l~~L~~~l~l~~N~l~g~----~p~~~--~~l~~L~~l~l~~N~l~~ 248 (714)
|+.|+|++|.++ +.+|..+..+++|+ .|+|++|.+++. +|..+ +.+++|+.|++++|++++
T Consensus 218 L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~-~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 218 LKVLDLQDNTFTHLGSSALAIALKSWPNLR-ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHGGGCTTCC-EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccEEECcCCCCCcHHHHHHHHHHccCCCcC-EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 889999999886 67888888888888 889999988866 56666 348888899999998887
No 357
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.71 E-value=4.2e-17 Score=179.28 Aligned_cols=154 Identities=29% Similarity=0.347 Sum_probs=71.8
Q ss_pred cEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEecc
Q 005102 65 RVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLS 144 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 144 (714)
+++.|++++|.++ .+| .++.+++|++|++++|++++ +|.. +++|+.|+|++|++++ +|.. +++|+.|+++
T Consensus 216 ~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls 285 (454)
T 1jl5_A 216 SLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVS 285 (454)
T ss_dssp TCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred cccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECc
Confidence 4455555555555 344 25555555555555555553 3321 2455555555555553 3332 2455555555
Q ss_pred CccCCC--CCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 145 QNFFNG--SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 145 ~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
+|++++ .+| ++|+.|++++|++++ ++ ....+|+.|++++|++++ +|.. +++|+ .|++++|++
T Consensus 286 ~N~l~~l~~~~------~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~-~L~L~~N~l 349 (454)
T 1jl5_A 286 ENIFSGLSELP------PNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLE-RLIASFNHL 349 (454)
T ss_dssp SSCCSEESCCC------TTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCC-EEECCSSCC
T ss_pred CCccCcccCcC------CcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCC-EEECCCCcc
Confidence 555554 222 122333333333221 11 001345555555555553 4433 23444 555555555
Q ss_pred CcCcCccccCCCCcccccCcCCcCCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
+ .+|. .+++|+.|++++|++++
T Consensus 350 ~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 350 A-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp S-CCCC---CCTTCCEEECCSSCCSS
T ss_pred c-cccc---hhhhccEEECCCCCCCc
Confidence 5 2443 24455555555555555
No 358
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.71 E-value=1.2e-17 Score=189.39 Aligned_cols=141 Identities=25% Similarity=0.328 Sum_probs=99.1
Q ss_pred CCCCCCCCCCCCCCcccce--------EecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCC
Q 005102 41 GSLSNWNSSDENPCSWNGI--------TCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQ 112 (714)
Q Consensus 41 ~~l~~w~~~~~~~c~w~gv--------~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 112 (714)
..+..|... .+||.|.|. .|....++.|++++|+|+ .+|..+. ++|++|+|++|.|+ .+|. .++
T Consensus 10 ~~w~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 10 AVWSAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp CHHHHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 344567543 467888653 344556888999999988 6777665 78899999999888 4565 567
Q ss_pred CCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccc
Q 005102 113 GLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNL 192 (714)
Q Consensus 113 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l 192 (714)
+|++|+|++|.|+ .+|. .+++|+.|+|++|++++ +|. .+++|+.|+|++|+++ .+|.. +++|+.|+|
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~----l~~L~~L~L 148 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSV 148 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC----CTTCCEEEC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC----CCCCCEEEC
Confidence 8888888888887 5665 56788888888888874 554 4566777777777776 35542 356667777
Q ss_pred cCCcccccCCC
Q 005102 193 SFNKFNGSIPS 203 (714)
Q Consensus 193 ~~N~l~g~~p~ 203 (714)
++|+++ .+|.
T Consensus 149 s~N~l~-~l~~ 158 (622)
T 3g06_A 149 SDNQLA-SLPA 158 (622)
T ss_dssp CSSCCS-CCCC
T ss_pred cCCcCC-CcCC
Confidence 777666 3443
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.70 E-value=1.9e-17 Score=171.02 Aligned_cols=163 Identities=26% Similarity=0.358 Sum_probs=138.7
Q ss_pred cCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCC
Q 005102 71 IPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNG 150 (714)
Q Consensus 71 l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 150 (714)
+..+.+++..+ +..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..| ++.+++|+.|+|++|++++
T Consensus 31 l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 104 (291)
T 1h6t_A 31 LKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD 104 (291)
T ss_dssp TTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred hcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC
Confidence 44455554433 45789999999999999854 4 48889999999999999996544 9999999999999999985
Q ss_pred CCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccc
Q 005102 151 SLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASL 230 (714)
Q Consensus 151 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~ 230 (714)
+| .+..+++|+.|+|++|++++ ++ .+ ..+++|+.|+|++|++++. ..+..+++|+ .|++++|++++..| +
T Consensus 105 -~~-~l~~l~~L~~L~L~~n~i~~-~~-~l-~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~-~L~L~~N~l~~~~~--l 174 (291)
T 1h6t_A 105 -LS-SLKDLKKLKSLSLEHNGISD-IN-GL-VHLPQLESLYLGNNKITDI--TVLSRLTKLD-TLSLEDNQISDIVP--L 174 (291)
T ss_dssp -GG-GGTTCTTCCEEECTTSCCCC-CG-GG-GGCTTCCEEECCSSCCCCC--GGGGGCTTCS-EEECCSSCCCCCGG--G
T ss_pred -Ch-hhccCCCCCEEECCCCcCCC-Ch-hh-cCCCCCCEEEccCCcCCcc--hhhccCCCCC-EEEccCCccccchh--h
Confidence 44 48999999999999999985 44 45 4689999999999999954 5788999999 99999999997766 9
Q ss_pred cCCCCcccccCcCCcCCCC
Q 005102 231 GNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 231 ~~l~~L~~l~l~~N~l~~~ 249 (714)
..+++|+.|++++|++++.
T Consensus 175 ~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 175 AGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp TTCTTCCEEECCSSCCCBC
T ss_pred cCCCccCEEECCCCcCCCC
Confidence 9999999999999999975
No 360
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.70 E-value=6.6e-18 Score=185.65 Aligned_cols=164 Identities=22% Similarity=0.210 Sum_probs=85.7
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCC-------------CEEEcCCCcCcccCCc
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGL-------------QSLVLYGNSFSGSVPN 130 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~g~~p~ 130 (714)
.+++.|++++|++ |.+|++|++|++|++|++++|.+.|.+|..++++++| +.|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4677788888888 7888888888888888888888888888887776653 777777777774 444
Q ss_pred ccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcc
Q 005102 131 EIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSS 210 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 210 (714)
. .++|+.|+|++|++++ +|..+ ++|+.|++++|++++ +|.. .++|++|++++|++++ +| .++++++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~-l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKA-LSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSC-CCSC----CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred C---cCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCc-ccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 2 2567777777777765 55432 456666666666653 3321 1455666666666653 55 3555556
Q ss_pred cccccccccccCCcCcCccccCCCCcccccCcCCcCCC
Q 005102 211 LQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 211 L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
|+ .|++++|++++ +|..+ ++|++|++++|++++
T Consensus 155 L~-~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~ 187 (454)
T 1jl5_A 155 LK-IIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE 187 (454)
T ss_dssp CC-EEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS
T ss_pred CC-EEECCCCcCcc-cCCCc---ccccEEECcCCcCCc
Confidence 65 56666666553 44322 355555555555555
No 361
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=5.6e-17 Score=154.44 Aligned_cols=137 Identities=26% Similarity=0.324 Sum_probs=106.3
Q ss_pred CCCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcc
Q 005102 52 NPCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNE 131 (714)
Q Consensus 52 ~~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 131 (714)
+.|+|.+|.|.. ++++. +|..+ .++|++|+|++|++++..+..+..+++|++|+|++|++++..+..
T Consensus 5 C~C~~~~l~~~~----------~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 5 CSCSGTEIRCNS----------KGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp CEEETTEEECCS----------SCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CEeCCCEEEecC----------CCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 457899988864 34443 44433 368999999999998766667788999999999999998666667
Q ss_pred cCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCC
Q 005102 132 IGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202 (714)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p 202 (714)
|+.+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|...+..+++|+.|+|++|.+++..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888999999999999998766666788888999999999888 4555554567888888888888875543
No 362
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.69 E-value=1.5e-19 Score=191.13 Aligned_cols=192 Identities=19% Similarity=0.236 Sum_probs=166.3
Q ss_pred cccceEecCCcEEEEEcCCCCccccCCccccCC--CCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCccc-CCcc
Q 005102 55 SWNGITCKEQRVVSVSIPKKKLLGFLPSALGSL--TDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGS-VPNE 131 (714)
Q Consensus 55 ~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~ 131 (714)
.|+++.|+...++.++++++.+. |..+..+ ++|+.|++++|.+.+..+. +..+++|+.|+|++|.+++. +|..
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~ 113 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGI 113 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHH
T ss_pred HHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHH
Confidence 69999887777889999999887 5667777 8999999999999977665 66899999999999999876 8888
Q ss_pred cCCCCCCCEEeccCccCCCCCCcccccccccceeecccC-cCCCC-CCcccccCccccccccccCC-ccccc-CCCCCCC
Q 005102 132 IGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQN-NFTGP-LPNGFGSGLVSLEKLNLSFN-KFNGS-IPSNTGN 207 (714)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~~ 207 (714)
+..+++|+.|+|++|.+++..|..+..+++|++|+|++| .+++. +|..+ ..+++|+.|+|++| ++++. ++..+.+
T Consensus 114 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~-~~~~~L~~L~l~~~~~l~~~~~~~~~~~ 192 (336)
T 2ast_B 114 LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL-SSCSRLDELNLSWCFDFTEKHVQVAVAH 192 (336)
T ss_dssp HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH-HHCTTCCEEECCCCTTCCHHHHHHHHHH
T ss_pred HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH-hcCCCCCEEcCCCCCCcChHHHHHHHHh
Confidence 999999999999999999888999999999999999999 67753 55545 46899999999999 99864 6777888
Q ss_pred Cc-ccccccccccc--cCC-cCcCccccCCCCcccccCcCCc-CCCCCCC
Q 005102 208 LS-SLQGTVDFSHN--LFS-GSIPASLGNLPEKVYIDLTYNN-LSGPIPQ 252 (714)
Q Consensus 208 l~-~L~~~l~l~~N--~l~-g~~p~~~~~l~~L~~l~l~~N~-l~~~~p~ 252 (714)
++ +|+ .|++++| .++ +.+|..+..+++|+.|++++|. +++..+.
T Consensus 193 l~~~L~-~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 241 (336)
T 2ast_B 193 VSETIT-QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ 241 (336)
T ss_dssp SCTTCC-EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGG
T ss_pred cccCCC-EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHH
Confidence 99 999 9999999 566 6678888999999999999999 6655443
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=6.3e-20 Score=206.73 Aligned_cols=178 Identities=22% Similarity=0.213 Sum_probs=128.2
Q ss_pred EEEcCCCCccccCCccccCCCCCCEEEccCCC-------------CcccCChhhcCCCCCCEEE-cCCCcCcccCCc---
Q 005102 68 SVSIPKKKLLGFLPSALGSLTDLRHVNLRNNK-------------FFGSLPLELLEAQGLQSLV-LYGNSFSGSVPN--- 130 (714)
Q Consensus 68 ~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~g~~p~--- 130 (714)
.|+|++|+|+ .+|+.++++++|+.|++++|. +.+.+|..+..+++|+.|+ ++.|.+. .++.
T Consensus 353 ~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~l~l 430 (567)
T 1dce_A 353 RCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRSKFL 430 (567)
T ss_dssp SCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHH
T ss_pred eccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhhhhh
Confidence 3444455543 345555555555555554443 3444444455555555554 3333221 0100
Q ss_pred ---ccCC--CCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCC
Q 005102 131 ---EIGK--LKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNT 205 (714)
Q Consensus 131 ---~~~~--l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 205 (714)
.+.. ...|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..++ .+++|+.|+|++|+|++ +| .+
T Consensus 431 ~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L~~L~Ls~N~l~~-lp-~l 504 (567)
T 1dce_A 431 LENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA-ALRCLEVLQASDNALEN-VD-GV 504 (567)
T ss_dssp HHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG-GCTTCCEEECCSSCCCC-CG-GG
T ss_pred hcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh-cCCCCCEEECCCCCCCC-Cc-cc
Confidence 0000 1258899999999985 776 999999999999999998 8998885 69999999999999995 78 89
Q ss_pred CCCcccccccccccccCCcCc-CccccCCCCcccccCcCCcCCCCCCCCc
Q 005102 206 GNLSSLQGTVDFSHNLFSGSI-PASLGNLPEKVYIDLTYNNLSGPIPQNG 254 (714)
Q Consensus 206 ~~l~~L~~~l~l~~N~l~g~~-p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 254 (714)
+++++|+ .|+|++|+|++.. |..++.+++|+.|++++|+|++.+|...
T Consensus 505 ~~l~~L~-~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 553 (567)
T 1dce_A 505 ANLPRLQ-ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQE 553 (567)
T ss_dssp TTCSSCC-EEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTT
T ss_pred CCCCCCc-EEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHH
Confidence 9999999 9999999999887 9999999999999999999999887543
No 364
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.69 E-value=1.3e-18 Score=187.74 Aligned_cols=185 Identities=18% Similarity=0.244 Sum_probs=155.4
Q ss_pred CCcEEEEEcCCCCccccCC----ccccCCCCCCEEEccCC---CCcccCChhh-------cCCCCCCEEEcCCCcCcc--
Q 005102 63 EQRVVSVSIPKKKLLGFLP----SALGSLTDLRHVNLRNN---KFFGSLPLEL-------LEAQGLQSLVLYGNSFSG-- 126 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~~N~l~g-- 126 (714)
...++.|+|++|++++..+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 3578999999999998744 45789999999999995 5667777666 688999999999999997
Q ss_pred --cCCcccCCCCCCCEEeccCccCCCCCCccc----ccc---------cccceeecccCcCC-CCCC---cccccCcccc
Q 005102 127 --SVPNEIGKLKYLQILDLSQNFFNGSLPVSI----VQC---------KRLKALDLSQNNFT-GPLP---NGFGSGLVSL 187 (714)
Q Consensus 127 --~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l---------~~L~~L~l~~N~l~-g~~p---~~~~~~l~~L 187 (714)
.+|..+..+++|+.|+|++|.+++..+..+ ..+ ++|++|+|++|+++ +.+| ..+ ..+++|
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l-~~~~~L 189 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF-QSHRLL 189 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH-HHCTTC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH-HhCCCc
Confidence 578889999999999999999975444333 344 89999999999997 4455 233 357899
Q ss_pred ccccccCCccc--c---cCCCCCCCCcccccccccccccCC----cCcCccccCCCCcccccCcCCcCCCC
Q 005102 188 EKLNLSFNKFN--G---SIPSNTGNLSSLQGTVDFSHNLFS----GSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 188 ~~L~l~~N~l~--g---~~p~~~~~l~~L~~~l~l~~N~l~----g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
+.|+|++|+++ | .+|..+.++++|+ .|+|++|.++ +.+|..+..+++|+.|++++|++++.
T Consensus 190 ~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~-~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 190 HTVKMVQNGIRPEGIEHLLLEGLAYCQELK-VLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTGGGCTTCC-EEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred CEEECcCCCCCHhHHHHHHHHHhhcCCCcc-EEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 99999999998 3 4566888999999 9999999997 77899999999999999999999865
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.69 E-value=3.8e-17 Score=185.17 Aligned_cols=165 Identities=25% Similarity=0.353 Sum_probs=142.3
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccC
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (714)
+.|..+.+...++ +..|++|+.|+|++|.+.. +| .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|
T Consensus 26 l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 26 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred HhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCC
Confidence 3455566665544 5688999999999999984 44 58999999999999999996554 99999999999999999
Q ss_pred CCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCc
Q 005102 149 NGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPA 228 (714)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~ 228 (714)
++ +| .+..|++|+.|+|++|++++ +| .+ ..+++|+.|+|++|+|++. ..+..+++|+ .|+|++|.|++..|
T Consensus 100 ~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l-~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~-~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 100 KD-LS-SLKDLKKLKSLSLEHNGISD-IN-GL-VHLPQLESLYLGNNKITDI--TVLSRLTKLD-TLSLEDNQISDIVP- 170 (605)
T ss_dssp CC-CT-TSTTCTTCCEEECTTSCCCC-CG-GG-GGCTTCSEEECCSSCCCCC--GGGGSCTTCS-EEECCSSCCCCCGG-
T ss_pred CC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cc-cCCCccCEEECCCCccCCc--hhhcccCCCC-EEECcCCcCCCchh-
Confidence 85 44 78999999999999999985 54 35 4699999999999999954 6788999999 99999999998877
Q ss_pred cccCCCCcccccCcCCcCCCC
Q 005102 229 SLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 229 ~~~~l~~L~~l~l~~N~l~~~ 249 (714)
+..+++|+.|+|++|+|++.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC
T ss_pred -hccCCCCCEEECcCCCCCCC
Confidence 99999999999999999985
No 366
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.67 E-value=1.8e-16 Score=179.77 Aligned_cols=167 Identities=25% Similarity=0.345 Sum_probs=92.4
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|+|++|++++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|.++ .+|.. +++|+.|+
T Consensus 80 l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEE
T ss_pred CCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEE
Confidence 3577888888888875 554 56777788888777774 333 3445555555555554 23332 24444444
Q ss_pred ccCccCCCCCCc---ccccc--------------cccceeecccCcCCCCCCcccc----------------cCcccccc
Q 005102 143 LSQNFFNGSLPV---SIVQC--------------KRLKALDLSQNNFTGPLPNGFG----------------SGLVSLEK 189 (714)
Q Consensus 143 Ls~N~l~g~~p~---~~~~l--------------~~L~~L~l~~N~l~g~~p~~~~----------------~~l~~L~~ 189 (714)
|++|++++ +|. .+..+ ++|+.|+|++|++++ +|..+. ..+++|+.
T Consensus 148 Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~ 225 (622)
T 3g06_A 148 VSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKE 225 (622)
T ss_dssp CCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCE
T ss_pred CcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCE
Confidence 44444442 221 11111 445555555555542 332110 01255667
Q ss_pred ccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCcCCCCCCCC
Q 005102 190 LNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQN 253 (714)
Q Consensus 190 L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 253 (714)
|+|++|+|++ +| ..+++|+ .|++++|+|+ .+|. .+++|+.|++++|+|+ .+|..
T Consensus 226 L~Ls~N~L~~-lp---~~l~~L~-~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~ 279 (622)
T 3g06_A 226 LIVSGNRLTS-LP---VLPSELK-ELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPES 279 (622)
T ss_dssp EECCSSCCSC-CC---CCCTTCC-EEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGG
T ss_pred EEccCCccCc-CC---CCCCcCc-EEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHH
Confidence 7777777763 55 2345566 6777777776 3454 4566777777777777 33433
No 367
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.67 E-value=3.4e-18 Score=182.68 Aligned_cols=108 Identities=24% Similarity=0.282 Sum_probs=48.9
Q ss_pred EEEEEcCCCCccccCC----ccccCCC-CCCEEEccCCCCcccCChhhcCC-----CCCCEEEcCCCcCcccCCcccCC-
Q 005102 66 VVSVSIPKKKLLGFLP----SALGSLT-DLRHVNLRNNKFFGSLPLELLEA-----QGLQSLVLYGNSFSGSVPNEIGK- 134 (714)
Q Consensus 66 ~~~l~l~~~~l~g~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~- 134 (714)
++.|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|+.|+|++|.+++..+..++.
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 4455555555444443 4444444 45555555555544444444432 44555555555554433332222
Q ss_pred ---C-CCCCEEeccCccCCCCCCccccc-----ccccceeecccCcCC
Q 005102 135 ---L-KYLQILDLSQNFFNGSLPVSIVQ-----CKRLKALDLSQNNFT 173 (714)
Q Consensus 135 ---l-~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~ 173 (714)
+ ++|+.|+|++|++++..+..+.. .++|++|+|++|.++
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 2 44555555555554333322221 134555555555544
No 368
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.67 E-value=2.4e-18 Score=183.86 Aligned_cols=179 Identities=18% Similarity=0.215 Sum_probs=125.7
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcccCC----hhhcCCC-CCCEEEcCCCcCcccCCcccCCC-----CCC
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLP----LELLEAQ-GLQSLVLYGNSFSGSVPNEIGKL-----KYL 138 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L 138 (714)
.+|+.|+++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|+.|+|++|.+++..+..++.+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5677788888887777777778888888888876665 5666777 78888888888887767666664 788
Q ss_pred CEEeccCccCCCCCCcccccc-----cccceeecccCcCCCCCCccccc---C-ccccccccccCCcccc----cCCCCC
Q 005102 139 QILDLSQNFFNGSLPVSIVQC-----KRLKALDLSQNNFTGPLPNGFGS---G-LVSLEKLNLSFNKFNG----SIPSNT 205 (714)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~~---~-l~~L~~L~l~~N~l~g----~~p~~~ 205 (714)
+.|+|++|++++..+..+... ++|+.|+|++|++++..+..+.. . ..+|+.|+|++|++++ .++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 888888888876666544443 77888888888887554443321 1 2478888888888874 333333
Q ss_pred CCCc-ccccccccccccCCcCcCcccc----CC-CCcccccCcCCcCCC
Q 005102 206 GNLS-SLQGTVDFSHNLFSGSIPASLG----NL-PEKVYIDLTYNNLSG 248 (714)
Q Consensus 206 ~~l~-~L~~~l~l~~N~l~g~~p~~~~----~l-~~L~~l~l~~N~l~~ 248 (714)
..+. +|+ .|++++|++++..+..++ .+ ++|+.||+++|++++
T Consensus 163 ~~~~~~L~-~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVN-SLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCC-EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCcccc-EeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 4444 677 888888888766665443 34 478888888888775
No 369
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.3e-16 Score=150.45 Aligned_cols=107 Identities=25% Similarity=0.264 Sum_probs=60.4
Q ss_pred CCCCEEEccCCCCc-ccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceee
Q 005102 88 TDLRHVNLRNNKFF-GSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALD 166 (714)
Q Consensus 88 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 166 (714)
++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 55555555666666666666666543 5556666666666666666655555555566666666
Q ss_pred cccCcCCCCCC--cccccCccccccccccCCccc
Q 005102 167 LSQNNFTGPLP--NGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 167 l~~N~l~g~~p--~~~~~~l~~L~~L~l~~N~l~ 198 (714)
|++|++++ +| ..+ ..+++|+.|++++|.++
T Consensus 102 Ls~N~l~~-~~~~~~l-~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPL-KKLECLKSLDLFNCEVT 133 (168)
T ss_dssp CBSSSCCS-SGGGGGG-SSCSCCCEEECCSSGGG
T ss_pred ccCCccCc-chhHHHH-hcCCCCCEEEeeCCcCc
Confidence 66666653 22 222 23455555555555554
No 370
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.8e-16 Score=150.85 Aligned_cols=125 Identities=26% Similarity=0.316 Sum_probs=101.3
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccC
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (714)
+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|.++++|+.|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 334456665 4565543 58999999999998 7788899999999999999999977778899999999999999999
Q ss_pred CCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 149 NGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
++..|..|..+++|+.|+|++|+|+ .+|...+..+++|+.|+|++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCee
Confidence 9777778888999999999999988 455554456788888888888876
No 371
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=150.85 Aligned_cols=137 Identities=22% Similarity=0.168 Sum_probs=120.5
Q ss_pred CcEEEEEcCCCCcc-ccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 64 QRVVSVSIPKKKLL-GFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 64 ~~~~~l~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 88999999999999999999999965 7789999999999999999988888888899999999
Q ss_pred ccCccCCCCC-CcccccccccceeecccCcCCCCCCc---ccccCccccccccccCCcccccCCCC
Q 005102 143 LSQNFFNGSL-PVSIVQCKRLKALDLSQNNFTGPLPN---GFGSGLVSLEKLNLSFNKFNGSIPSN 204 (714)
Q Consensus 143 Ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p~---~~~~~l~~L~~L~l~~N~l~g~~p~~ 204 (714)
|++|++++.. +..+..+++|+.|+|++|.+++ +|. ..+..+++|+.|++++|.+. .+|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 9999998532 2789999999999999999995 454 23356999999999999987 66654
No 372
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=2.9e-16 Score=165.39 Aligned_cols=134 Identities=11% Similarity=0.097 Sum_probs=98.8
Q ss_pred cccccccCceEEEEEEECCCcEEEEEEeCCCCc--------------hhH--------HHHHHHHHHHhccCCCCccceE
Q 005102 408 AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGS--------------QRF--------KEFQTEVEAIGKIRHSNIVTLR 465 (714)
Q Consensus 408 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------------~~~--------~~~~~E~~~l~~l~H~niv~l~ 465 (714)
...||+|+||.||+|...+|+.||||+++.... ... ....+|...|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 457999999999999999999999998764210 000 1134677778888655543222
Q ss_pred EEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCC
Q 005102 466 AYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNM 545 (714)
Q Consensus 466 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~ 545 (714)
-+.. ...++||||+++++|.++... .....++.|++.+|.|||. .+||||||||.|||+++++
T Consensus 180 p~~~--~~~~LVME~i~G~~L~~l~~~------------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 180 PIAQ--SRHTIVMSLVDALPMRQVSSV------------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp EEEE--ETTEEEEECCSCEEGGGCCCC------------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred eeec--cCceEEEEecCCccHhhhccc------------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 2221 234799999999888765421 1245688999999999999 8999999999999998776
Q ss_pred ----------CeEEcccchhhhh
Q 005102 546 ----------EPHVSDFGLARLA 558 (714)
Q Consensus 546 ----------~~kl~DFGla~~~ 558 (714)
.+.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3889999977543
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.63 E-value=9.3e-16 Score=155.82 Aligned_cols=148 Identities=19% Similarity=0.241 Sum_probs=128.4
Q ss_pred CCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 63 EQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 63 ~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
..+++.|++++|+++. +| .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++ +|... . ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 3578899999999985 45 79999999999999999996544 8999999999999999985 55433 3 9999999
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
|++|++++ +| .+..+++|+.|+|++|++++ +| .+ ..+++|+.|+|++|++++. ..+..+++|+ .|++++|.+
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l-~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~-~L~l~~N~~ 184 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-ML-GFLSKLEVLDLHGNEITNT--GGLTRLKKVN-WIDLTGQKC 184 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GG-GGCTTCCEEECTTSCCCBC--TTSTTCCCCC-EEEEEEEEE
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HH-ccCCCCCEEECCCCcCcch--HHhccCCCCC-EEeCCCCcc
Confidence 99999985 44 68999999999999999985 55 44 4699999999999999965 6788999999 999999999
Q ss_pred CcC
Q 005102 223 SGS 225 (714)
Q Consensus 223 ~g~ 225 (714)
++.
T Consensus 185 ~~~ 187 (263)
T 1xeu_A 185 VNE 187 (263)
T ss_dssp ECC
T ss_pred cCC
Confidence 865
No 374
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=146.72 Aligned_cols=127 Identities=29% Similarity=0.333 Sum_probs=74.2
Q ss_pred CEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccC
Q 005102 91 RHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQN 170 (714)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 170 (714)
+.+++++|.++ .+|..+. ++|+.|+|++|.|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46677777776 4554432 46666777776666 56666666666666666666666555555666666666666666
Q ss_pred cCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCC
Q 005102 171 NFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 171 ~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~ 223 (714)
+|++..|..+ .++++|+.|+|++|+|++..+..+..+++|+ .+++++|++.
T Consensus 89 ~l~~i~~~~f-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTF-DGLKSLRLLSLHGNDISVVPEGAFNDLSALS-HLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTT-TTCTTCCEEECCSSCCCBCCTTTTTTCTTCC-EEECCSSCEE
T ss_pred ccCEeCHHHh-CCCCCCCEEECCCCCCCeeChhhhhcCcccc-EEEeCCCCee
Confidence 6664333333 3455666666666665533333444455555 5555555444
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=2.2e-16 Score=145.75 Aligned_cols=108 Identities=26% Similarity=0.298 Sum_probs=66.3
Q ss_pred CCCCEEEccCCCCc-ccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceee
Q 005102 88 TDLRHVNLRNNKFF-GSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALD 166 (714)
Q Consensus 88 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 166 (714)
++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56677777777776 56666666666777777777766644 5566666666666666666655666555666666666
Q ss_pred cccCcCCCC-CCcccccCccccccccccCCccc
Q 005102 167 LSQNNFTGP-LPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 167 l~~N~l~g~-~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
+++|.+++. .|..+ ..+++|+.|++++|+++
T Consensus 95 ls~N~i~~~~~~~~~-~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 95 LSGNKIKDLSTIEPL-KKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCSHHHHGGG-GGCTTCCEEECTTCGGG
T ss_pred CCCCcCCChHHHHHH-hhCCCCCEEeCcCCccc
Confidence 666666531 12333 23555555555555554
No 376
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.62 E-value=2.4e-15 Score=159.67 Aligned_cols=206 Identities=15% Similarity=0.011 Sum_probs=154.1
Q ss_pred eEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCc-ccCCCCC
Q 005102 59 ITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPN-EIGKLKY 137 (714)
Q Consensus 59 v~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~ 137 (714)
.+|+.. .++-++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++
T Consensus 7 C~C~~~---~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 7 CHCSNR---VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SEEETT---EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred cEeeCC---EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 567642 4677889988 467766 36899999999999966666799999999999999999877775 5789988
Q ss_pred CCE-EeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccC-CcccccCCCCCCCCcc-cccc
Q 005102 138 LQI-LDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSF-NKFNGSIPSNTGNLSS-LQGT 214 (714)
Q Consensus 138 L~~-L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~-L~~~ 214 (714)
|+. ++++.|+++...|..|..+++|+.|++++|++++ +|...+....++..|++.+ |++....+..+..+.. ++ .
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~-~ 158 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESV-I 158 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSS-CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCE-E
T ss_pred hhhhhcccCCcccccCchhhhhcccccccccccccccc-CCchhhcccchhhhhhhccccccccccccchhhcchhhh-h
Confidence 775 6777899997778889999999999999999985 4443334466788888866 5676444456777664 55 8
Q ss_pred cccccccCCcCcCccccCCCCcccccCcC-CcCCCCCCCCccccCCCCcccccCCCCCCC
Q 005102 215 VDFSHNLFSGSIPASLGNLPEKVYIDLTY-NNLSGPIPQNGALMNRGPTAFIGNPRLCGP 273 (714)
Q Consensus 215 l~l~~N~l~g~~p~~~~~l~~L~~l~l~~-N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~ 273 (714)
|++++|+|+ .+|.......+|+.|++++ |+++...+..+............++.+..-
T Consensus 159 L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 159 LWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp EECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred hcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 999999999 4555555677899999986 566655555555444444445555555433
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=2.7e-16 Score=145.14 Aligned_cols=126 Identities=22% Similarity=0.242 Sum_probs=59.5
Q ss_pred CCCEEEcCCCcCc-ccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCcccccccc
Q 005102 113 GLQSLVLYGNSFS-GSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLN 191 (714)
Q Consensus 113 ~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~ 191 (714)
+|+.|++++|.++ +.+|..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++.+|..+ ..+++|+.|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~-~~l~~L~~L~ 94 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLA-EKCPNLTHLN 94 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHH-HHCTTCCEEE
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHh-hhCCCCCEEE
Confidence 4455555555554 44444445555555555555555432 344445555555555555544344333 2244555555
Q ss_pred ccCCccccc-CCCCCCCCcccccccccccccCCcCcC---ccccCCCCcccccCc
Q 005102 192 LSFNKFNGS-IPSNTGNLSSLQGTVDFSHNLFSGSIP---ASLGNLPEKVYIDLT 242 (714)
Q Consensus 192 l~~N~l~g~-~p~~~~~l~~L~~~l~l~~N~l~g~~p---~~~~~l~~L~~l~l~ 242 (714)
+++|++++. .|..+.++++|+ .|++++|.+++..+ ..++.+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLK-SLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCC-EEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCC-EEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555431 224444445554 55555555544333 344445555555443
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1.8e-15 Score=143.89 Aligned_cols=131 Identities=24% Similarity=0.251 Sum_probs=79.4
Q ss_pred CCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 90 LRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
.+.+++++|.++ .+|..+. ++|+.|+|++|.+++..+..|+.+++|+.|+|++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 466777777776 4454332 5677777777777755555567777777777777777654445566677777777777
Q ss_pred CcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcC
Q 005102 170 NNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGS 225 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~ 225 (714)
|++++ +|...+..+++|+.|+|++|+|++..+..+..+++|+ .+++++|++++.
T Consensus 86 N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQ-KIWLHTNPWDCS 139 (177)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC-EEECCSSCBCCC
T ss_pred CCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccC-EEEecCCCeecc
Confidence 77763 3333323466666666666666633333344555555 555555555543
No 379
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.58 E-value=1e-16 Score=180.48 Aligned_cols=158 Identities=21% Similarity=0.240 Sum_probs=131.7
Q ss_pred ccccCCccccCCCCCCEEE-ccCCCCcccCCh------hhcC--CCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCc
Q 005102 76 LLGFLPSALGSLTDLRHVN-LRNNKFFGSLPL------ELLE--AQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQN 146 (714)
Q Consensus 76 l~g~~p~~~~~l~~L~~L~-L~~N~l~~~~p~------~~~~--l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 146 (714)
+.+.+|..+++|++|+.|+ ++.|.+.. ++. .+.. ...|+.|+|++|.|++ +|. |+.+++|+.|+|++|
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cccCCHHHHHHHHhcccCcchhhcccch-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 6788888999999999998 66665431 111 1111 1359999999999995 776 999999999999999
Q ss_pred cCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccC-CCCCCCCcccccccccccccCCcC
Q 005102 147 FFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSI-PSNTGNLSSLQGTVDFSHNLFSGS 225 (714)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~-p~~~~~l~~L~~~l~l~~N~l~g~ 225 (714)
+|+ .+|..|..+++|+.|+|++|+|++ +| .+ ..+++|+.|+|++|+|++.+ |..++++++|+ .|+|++|+|++.
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l-~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~-~L~L~~N~l~~~ 548 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GV-ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV-LLNLQGNSLCQE 548 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GG-TTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC-EEECTTSGGGGS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-cc-CCCCCCcEEECCCCCCCCCCCcHHHhcCCCCC-EEEecCCcCCCC
Confidence 999 899999999999999999999996 78 66 46999999999999999877 99999999999 999999999987
Q ss_pred cCcc---ccCCCCcccccC
Q 005102 226 IPAS---LGNLPEKVYIDL 241 (714)
Q Consensus 226 ~p~~---~~~l~~L~~l~l 241 (714)
.|.. +..+++|+.||+
T Consensus 549 ~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 549 EGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCTTHHHHHCTTCSEEEC
T ss_pred ccHHHHHHHHCcccCccCC
Confidence 6632 345888888864
No 380
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.5e-17 Score=161.47 Aligned_cols=155 Identities=19% Similarity=0.258 Sum_probs=103.2
Q ss_pred ccCCCCCCEEEccCCCCcccCCh------hhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccc
Q 005102 84 LGSLTDLRHVNLRNNKFFGSLPL------ELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIV 157 (714)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 157 (714)
+.....++.++++.|.++|.+|. .+..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445566666666666666555 67777777777777777764 55 6677777777777777776 5666666
Q ss_pred cccccceeecccCcCCCCCCcccccCccccccccccCCcccccCC-CCCCCCcccccccccccccCCcCcCcc-------
Q 005102 158 QCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP-SNTGNLSSLQGTVDFSHNLFSGSIPAS------- 229 (714)
Q Consensus 158 ~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~~l~l~~N~l~g~~p~~------- 229 (714)
.+++|+.|+|++|++++ +| .+ ..+++|+.|+|++|++++..+ ..+..+++|+ .+++++|++++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~-~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~~ 166 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GI-EKLVNLRVLYMSNNKITNWGEIDKLAALDKLE-DLLLAGNPLYNDYKENNATSEYR 166 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HH-HHHHHSSEEEESEEECCCHHHHHHHTTTTTCS-EEEECSCHHHHHHHTTTTHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-cc-ccCCCCCEEECCCCcCCchhHHHHHhcCCCCC-EEEecCCccccccccccchHHHH
Confidence 66777777777777764 44 34 346777777777777763221 3566677777 7777777777665543
Q ss_pred ---ccCCCCcccccCcCCcCC
Q 005102 230 ---LGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 230 ---~~~l~~L~~l~l~~N~l~ 247 (714)
+..+++|+.|| +|.++
T Consensus 167 ~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 167 IEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHCSSCSEEC--CGGGT
T ss_pred HHHHHhCCCcEEEC--CcccC
Confidence 67788888776 55554
No 381
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=5.6e-15 Score=140.41 Aligned_cols=132 Identities=17% Similarity=0.115 Sum_probs=87.2
Q ss_pred cccCCCCCCEEEccCCCCcccCChhhcCCC-CCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccc
Q 005102 83 ALGSLTDLRHVNLRNNKFFGSLPLELLEAQ-GLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKR 161 (714)
Q Consensus 83 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 161 (714)
.+.++++|++|+|++|+++. +|. +..+. +|+.|+|++|.+++. ..++.+++|+.|+|++|+|++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45667788888888888873 444 44444 788888888888754 56777888888888888887443344477788
Q ss_pred cceeecccCcCCCCCCc--ccccCccccccccccCCcccccCCCC----CCCCcccccccccccccC
Q 005102 162 LKALDLSQNNFTGPLPN--GFGSGLVSLEKLNLSFNKFNGSIPSN----TGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 162 L~~L~l~~N~l~g~~p~--~~~~~l~~L~~L~l~~N~l~g~~p~~----~~~l~~L~~~l~l~~N~l 222 (714)
|+.|+|++|+++ .+|. .+ ..+++|+.|++++|.++ .+|.. +..+++|+ .+|+++|.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l-~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~-~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPL-ASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVR-VLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGG-GGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCS-EETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhh-hcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccc-eeCCCcCCH
Confidence 888888888875 5665 34 34667777777777766 44442 44444444 444444443
No 382
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.54 E-value=7.2e-17 Score=178.20 Aligned_cols=184 Identities=16% Similarity=0.062 Sum_probs=123.6
Q ss_pred CcEEEEEcCCCCccccCCcccc-----CCCCCCEEEccCCCCccc----CChhhcCCCCCCEEEcCCCcCcccC-----C
Q 005102 64 QRVVSVSIPKKKLLGFLPSALG-----SLTDLRHVNLRNNKFFGS----LPLELLEAQGLQSLVLYGNSFSGSV-----P 129 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~~-----p 129 (714)
.+++.|+|++|.+++..+..+. .+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++.- +
T Consensus 170 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 249 (461)
T 1z7x_W 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCP 249 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHH
Confidence 5788888888887765444443 356888888888888753 5666777788888888888876532 2
Q ss_pred cccCCCCCCCEEeccCccCCCC----CCcccccccccceeecccCcCCCCCCcccc----cCccccccccccCCccccc-
Q 005102 130 NEIGKLKYLQILDLSQNFFNGS----LPVSIVQCKRLKALDLSQNNFTGPLPNGFG----SGLVSLEKLNLSFNKFNGS- 200 (714)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~----~~l~~L~~L~l~~N~l~g~- 200 (714)
..+..+++|+.|+|++|+++.. ++..+..+++|++|+|++|.+++..+..+. ...++|+.|+|++|.+++.
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 2233577888888888888753 566667778888888888877543222222 1225777777777777754
Q ss_pred ---CCCCCCCCcccccccccccccCCcCcCccccC-----CCCcccccCcCCcCCC
Q 005102 201 ---IPSNTGNLSSLQGTVDFSHNLFSGSIPASLGN-----LPEKVYIDLTYNNLSG 248 (714)
Q Consensus 201 ---~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~-----l~~L~~l~l~~N~l~~ 248 (714)
+|..+..+++|+ .|++++|.+++..+..+.. .++|+.|++++|++++
T Consensus 330 ~~~l~~~l~~~~~L~-~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 330 CSHFSSVLAQNRFLL-ELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHHHHHHHCSSCC-EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHHHHHHhhCCCcc-EEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 455555667777 7777777776554444432 5677777777777764
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=3.8e-15 Score=141.55 Aligned_cols=134 Identities=20% Similarity=0.237 Sum_probs=115.2
Q ss_pred hhhcCCCCCCEEEcCCCcCcccCCcccCCCC-CCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCc
Q 005102 106 LELLEAQGLQSLVLYGNSFSGSVPNEIGKLK-YLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGL 184 (714)
Q Consensus 106 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l 184 (714)
..+.++.+|+.|+|++|.++ .+|. +..+. +|+.|+|++|++++. ..+..+++|+.|+|++|+++ .+|..++..+
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l 87 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQAL 87 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHC
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcC
Confidence 34667889999999999999 5565 55554 999999999999964 68899999999999999998 5666554569
Q ss_pred cccccccccCCcccccCCC--CCCCCcccccccccccccCCcCcCcc----ccCCCCcccccCcCCcCC
Q 005102 185 VSLEKLNLSFNKFNGSIPS--NTGNLSSLQGTVDFSHNLFSGSIPAS----LGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 185 ~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~~l~l~~N~l~g~~p~~----~~~l~~L~~l~l~~N~l~ 247 (714)
++|+.|+|++|+++ .+|. .+..+++|+ .+++++|+++ .+|.. +..+++|+.||++.|.+.
T Consensus 88 ~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~-~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 88 PDLTELILTNNSLV-ELGDLDPLASLKSLT-YLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TTCCEEECCSCCCC-CGGGGGGGGGCTTCC-EEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCEEECCCCcCC-cchhhHhhhcCCCCC-EEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999999996 6776 888999999 9999999998 56664 899999999999999875
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=2.8e-17 Score=159.64 Aligned_cols=149 Identities=26% Similarity=0.292 Sum_probs=126.3
Q ss_pred cEEEEEcCCCCccccCCc------cccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCC
Q 005102 65 RVVSVSIPKKKLLGFLPS------ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYL 138 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 138 (714)
+++.+++..+.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455556666777777776 89999999999999999996 77 8999999999999999998 788888888999
Q ss_pred CEEeccCccCCCCCCcccccccccceeecccCcCCCCCCc--ccccCccccccccccCCcccccCCCC----------CC
Q 005102 139 QILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPN--GFGSGLVSLEKLNLSFNKFNGSIPSN----------TG 206 (714)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~~~~l~~L~~L~l~~N~l~g~~p~~----------~~ 206 (714)
+.|+|++|++++ +| .+..+++|+.|+|++|++++ +|. .+ ..+++|+.|++++|.+++.+|.. +.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l-~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKL-AALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHH-TTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHH-hcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 999999999985 55 68899999999999999984 443 44 46999999999999999887764 77
Q ss_pred CCcccccccccccccCC
Q 005102 207 NLSSLQGTVDFSHNLFS 223 (714)
Q Consensus 207 ~l~~L~~~l~l~~N~l~ 223 (714)
.+++|+ .|| +|.++
T Consensus 172 ~l~~L~-~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNLK-KLD--GMPVD 185 (198)
T ss_dssp HCSSCS-EEC--CGGGT
T ss_pred hCCCcE-EEC--CcccC
Confidence 788888 665 67665
No 385
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.51 E-value=4e-16 Score=172.23 Aligned_cols=181 Identities=23% Similarity=0.157 Sum_probs=99.3
Q ss_pred cEEEEEcCCCCccc----cCCccccCCCCCCEEEccCCCCcccCChhhc-----CCCCCCEEEcCCCcCccc----CCcc
Q 005102 65 RVVSVSIPKKKLLG----FLPSALGSLTDLRHVNLRNNKFFGSLPLELL-----EAQGLQSLVLYGNSFSGS----VPNE 131 (714)
Q Consensus 65 ~~~~l~l~~~~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~g~----~p~~ 131 (714)
+++.|+|++|+++. .+|..+..+++|++|+|++|.+++..+..+. ..++|+.|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 46666666666662 4556666666666666666666543333222 134566666666666542 2444
Q ss_pred cCCCCCCCEEeccCccCCCCCCccccc-----ccccceeecccCcCCCC----CCcccccCccccccccccCCcccccC-
Q 005102 132 IGKLKYLQILDLSQNFFNGSLPVSIVQ-----CKRLKALDLSQNNFTGP----LPNGFGSGLVSLEKLNLSFNKFNGSI- 201 (714)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~g~----~p~~~~~~l~~L~~L~l~~N~l~g~~- 201 (714)
+..+++|+.|+|++|.++...+..+.. +++|+.|+|++|.+++. ++..+. .+++|+.|+|++|++++.-
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~-~~~~L~~L~Ls~n~l~~~~~ 244 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVA-SKASLRELALGSNKLGDVGM 244 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHH-HCTTCCEEECCSSBCHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHH-hCCCccEEeccCCcCChHHH
Confidence 455566666666666665433333321 34666666666666542 333332 3566666666666665321
Q ss_pred ----CCCCCCCcccccccccccccCCcC----cCccccCCCCcccccCcCCcCC
Q 005102 202 ----PSNTGNLSSLQGTVDFSHNLFSGS----IPASLGNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 202 ----p~~~~~l~~L~~~l~l~~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~ 247 (714)
+..+..+++|+ .|++++|.++.. ++..+..+++|+.|++++|+++
T Consensus 245 ~~l~~~~~~~~~~L~-~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 245 AELCPGLLHPSSRLR-TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHHTSTTCCCC-EEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHHhcCCCCce-EEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 22222455666 666666666643 4555556666666666666654
No 386
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4.2e-14 Score=133.42 Aligned_cols=103 Identities=21% Similarity=0.172 Sum_probs=76.2
Q ss_pred EEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccC
Q 005102 69 VSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF 148 (714)
Q Consensus 69 l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (714)
|++++|+|+. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|
T Consensus 14 l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 4445666664 565553 7788888888888877777788888888888888888866666677888888888888888
Q ss_pred CCCCCcccccccccceeecccCcCCC
Q 005102 149 NGSLPVSIVQCKRLKALDLSQNNFTG 174 (714)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~l~~N~l~g 174 (714)
++..+..|..+++|+.|+|++|.++.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 76555567777778888887777764
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.1e-13 Score=130.53 Aligned_cols=106 Identities=25% Similarity=0.287 Sum_probs=76.2
Q ss_pred CCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeeccc
Q 005102 90 LRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQ 169 (714)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~ 169 (714)
.+.|++++|.|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467888888887 4665553 6788888888888877777788888888888888888765555667777788888888
Q ss_pred CcCCCCCCcccccCccccccccccCCcccc
Q 005102 170 NNFTGPLPNGFGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 170 N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g 199 (714)
|+|++ +|...+..+++|+.|+|++|.++.
T Consensus 88 N~l~~-~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKS-IPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCE-eCHHHhcCCCCCCEEEeCCCCCCC
Confidence 87774 444333457777777777777763
No 388
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.6e-13 Score=128.48 Aligned_cols=104 Identities=23% Similarity=0.236 Sum_probs=77.0
Q ss_pred EEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCc
Q 005102 67 VSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQN 146 (714)
Q Consensus 67 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 146 (714)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45677777774 4666554 77888888888888777777888888888888888887655555677888888888888
Q ss_pred cCCCCCCcccccccccceeecccCcCC
Q 005102 147 FFNGSLPVSIVQCKRLKALDLSQNNFT 173 (714)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~l~~N~l~ 173 (714)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 887544445777777777777777776
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2e-13 Score=129.28 Aligned_cols=104 Identities=26% Similarity=0.298 Sum_probs=76.6
Q ss_pred CEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccC
Q 005102 91 RHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQN 170 (714)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N 170 (714)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888885 6666554 67888888888888777777888888888888888887544445677788888888888
Q ss_pred cCCCCCCcccccCccccccccccCCccc
Q 005102 171 NFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 171 ~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
+|+ .+|...+..+++|+.|+|++|.+.
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCcc
Confidence 887 455443345777777777777776
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=1.5e-13 Score=145.55 Aligned_cols=110 Identities=20% Similarity=0.198 Sum_probs=94.2
Q ss_pred CCcccceEecCCcEEEEEcCCCCccccCCccccCCCCCCEEEccC-CCCcccCChhhcCCCCCCEEEcCCCcCcccCCcc
Q 005102 53 PCSWNGITCKEQRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRN-NKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNE 131 (714)
Q Consensus 53 ~c~w~gv~c~~~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 131 (714)
.|.|..|.|+.. |+|++ +|. |..+++|+.|+|++ |+|++..|..|..+++|+.|+|++|+|++..|..
T Consensus 7 ~C~~~~v~~~~~---------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 7 PHGSSGLRCTRD---------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp CSSSSCEECCSS---------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred cccCCEEEcCCC---------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 588988888531 26665 787 99999999999996 9999888889999999999999999999999999
Q ss_pred cCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCC
Q 005102 132 IGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTG 174 (714)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 174 (714)
|++|++|+.|+|++|+|++..|..|..+. |+.|+|++|.|..
T Consensus 76 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred hcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999999999999965555555555 9999999999974
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=3.6e-12 Score=134.91 Aligned_cols=105 Identities=23% Similarity=0.183 Sum_probs=89.1
Q ss_pred CEEEccCC-CCcccCChhhcCCCCCCEEEcCC-CcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecc
Q 005102 91 RHVNLRNN-KFFGSLPLELLEAQGLQSLVLYG-NSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLS 168 (714)
Q Consensus 91 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~ 168 (714)
..++++++ +|+ .+|. +..+++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688887 888 4787 99999999999996 99998777889999999999999999998888889999999999999
Q ss_pred cCcCCCCCCcccccCccccccccccCCcccc
Q 005102 169 QNNFTGPLPNGFGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 169 ~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g 199 (714)
+|+|+ .+|..++..+. |+.|+|++|.|..
T Consensus 89 ~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALE-SLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCS-CCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccc-eeCHHHcccCC-ceEEEeeCCCccC
Confidence 99998 46665555444 8899999988873
No 392
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=3.4e-12 Score=134.07 Aligned_cols=188 Identities=14% Similarity=0.067 Sum_probs=130.9
Q ss_pred CcEEEEEcCCCCcc--------------------ccCCccccC--------CCCCCEEEccCCCCcccCChhhcCCCCCC
Q 005102 64 QRVVSVSIPKKKLL--------------------GFLPSALGS--------LTDLRHVNLRNNKFFGSLPLELLEAQGLQ 115 (714)
Q Consensus 64 ~~~~~l~l~~~~l~--------------------g~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 115 (714)
.+++.|+|++|++. ..-+.+|.+ +++|+.|+|++ .++.+-+..|.++++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 45667777777666 122235556 88899999988 77766667788889999
Q ss_pred EEEcCCCcCcccCCcccCCCCCCCEEeccCccC----CCCCCccc-----------------------------------
Q 005102 116 SLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFF----NGSLPVSI----------------------------------- 156 (714)
Q Consensus 116 ~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l----~g~~p~~~----------------------------------- 156 (714)
.|+|++|.++...+..|.+..++..+.++.+.. ...-+..|
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l 207 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFL 207 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceE
Confidence 999998888766666677777777666655221 00000000
Q ss_pred ---------------ccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCccccccccccccc
Q 005102 157 ---------------VQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNL 221 (714)
Q Consensus 157 ---------------~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~ 221 (714)
..+++|+.|+|++|+++ .||...+.++.+|+.|+|.+| ++..-+..|.++.+|+..+++.+ .
T Consensus 208 ~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 208 TIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 02678888888888887 677777778888888888888 66444467778877754677776 6
Q ss_pred CCcCcCccccCCCCcccccCcCCcCCCCCCCCcc
Q 005102 222 FSGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 222 l~g~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 255 (714)
++..-+.+|.++++|+.++++.|+++...+..+.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 7766678888888888888888888866555433
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=1.9e-11 Score=123.81 Aligned_cols=135 Identities=16% Similarity=0.110 Sum_probs=105.8
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCCHhh
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSLAT 488 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 488 (714)
.++.|+.+.||++... +..+++|+...........+.+|+++++.+. |..+.++++++...+..|+||||++|.+|.+
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhh
Confidence 4677778999999864 6899999987532122245889999999984 6778899999988888999999999999887
Q ss_pred hhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------
Q 005102 489 ALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS------------------------------------------- 525 (714)
Q Consensus 489 ~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------- 525 (714)
.+.. ......++.+++++|+.||+..
T Consensus 100 ~~~~-----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 100 EYED-----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HCCT-----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred ccCC-----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 6321 1123578899999999999821
Q ss_pred -------------CCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 526 -------------PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 526 -------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
+..++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876566799999875
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.22 E-value=1.6e-11 Score=128.84 Aligned_cols=186 Identities=12% Similarity=0.092 Sum_probs=133.3
Q ss_pred cEEEEEcCCCCccccCCccccC-CCCCCEEEccCCCCc--------------------ccCChhhcC--------CCCCC
Q 005102 65 RVVSVSIPKKKLLGFLPSALGS-LTDLRHVNLRNNKFF--------------------GSLPLELLE--------AQGLQ 115 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~~p~~~~~-l~~L~~L~L~~N~l~--------------------~~~p~~~~~--------l~~L~ 115 (714)
+++.|.+.++ +.+.--..+.. +++|+.|||++|++. ...+..|.+ +++|+
T Consensus 26 ~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~ 104 (329)
T 3sb4_A 26 SITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLE 104 (329)
T ss_dssp HCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCC
T ss_pred ceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCc
Confidence 4566666542 21111123334 889999999999987 122345667 89999
Q ss_pred EEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcC----C------------------
Q 005102 116 SLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNF----T------------------ 173 (714)
Q Consensus 116 ~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l----~------------------ 173 (714)
.|+|.+ .++..-+..|.++++|+.|+|++|.+....+..|..+.++..+.++.+.. .
T Consensus 105 ~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~ 183 (329)
T 3sb4_A 105 KVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQ 183 (329)
T ss_dssp C-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEE
T ss_pred EEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEE
Confidence 999998 88866666799999999999999999866667788888888777665321 0
Q ss_pred ----CCCCcccc---------------------------cCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 174 ----GPLPNGFG---------------------------SGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 174 ----g~~p~~~~---------------------------~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
+.++..++ ..+++|+.|+|++|+++..-+..|.++.+|+ .++|.+| +
T Consensus 184 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~-~l~l~~n-i 261 (329)
T 3sb4_A 184 VGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL-KIKLPHN-L 261 (329)
T ss_dssp ECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC-EEECCTT-C
T ss_pred ecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC-EEECCcc-c
Confidence 01111000 0267999999999999944446789999999 9999998 8
Q ss_pred CcCcCccccCCCCcc-cccCcCCcCCCCCCCCcc
Q 005102 223 SGSIPASLGNLPEKV-YIDLTYNNLSGPIPQNGA 255 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~-~l~l~~N~l~~~~p~~~~ 255 (714)
+..-+.+|.++++|+ .+++.+ +++...+..+.
T Consensus 262 ~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~ 294 (329)
T 3sb4_A 262 KTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFM 294 (329)
T ss_dssp CEECTTTTTTCTTCCEEEEECT-TCCEECTTTTT
T ss_pred ceehHHHhhCChhccEEEEEcc-cceEEchhhhh
Confidence 767778899999999 999988 67655555444
No 395
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.19 E-value=1.8e-13 Score=155.88 Aligned_cols=105 Identities=13% Similarity=-0.011 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCCccccCC-ccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcC-----------CCcCccc-CCc
Q 005102 64 QRVVSVSIPKKKLLGFLP-SALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLY-----------GNSFSGS-VPN 130 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~g~-~p~ 130 (714)
.+++.|+|++|.+++... ..+..+++|++|+|+++...+.++..+..+++|+.|+|+ .|.+++. ++.
T Consensus 293 ~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~ 372 (592)
T 3ogk_B 293 AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIA 372 (592)
T ss_dssp GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHH
T ss_pred CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHH
Confidence 478999999998776544 335777888888877332223333334556667777777 2455432 112
Q ss_pred ccCCCCCCCEEeccCccCCCCCCccccc-ccccceeecc
Q 005102 131 EIGKLKYLQILDLSQNFFNGSLPVSIVQ-CKRLKALDLS 168 (714)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~l~ 168 (714)
.+..+++|+.|+|+.|++++..+..+.. +++|+.|+|+
T Consensus 373 l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 373 LAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred HHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 2233566666666666665544444443 5556666664
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.9e-13 Score=145.67 Aligned_cols=159 Identities=18% Similarity=0.203 Sum_probs=86.1
Q ss_pred CCCCEEEccCCCCcccCChhhcCC-----CCCCEEEcCCCcCcccCCccc-CCCCCCCEEeccCccCCCCCCccc-----
Q 005102 88 TDLRHVNLRNNKFFGSLPLELLEA-----QGLQSLVLYGNSFSGSVPNEI-GKLKYLQILDLSQNFFNGSLPVSI----- 156 (714)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 156 (714)
+.|+.|+|++|.|+......+... ++|+.|+|++|.++..-...+ ..+++|+.|+|++|+|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 455666666666653322222221 456666666666543222222 223456666666666653222222
Q ss_pred ccccccceeecccCcCCCC----CCcccccCccccccccccCCcccc----cCCCCCCCCcccccccccccccCCcC---
Q 005102 157 VQCKRLKALDLSQNNFTGP----LPNGFGSGLVSLEKLNLSFNKFNG----SIPSNTGNLSSLQGTVDFSHNLFSGS--- 225 (714)
Q Consensus 157 ~~l~~L~~L~l~~N~l~g~----~p~~~~~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~~l~l~~N~l~g~--- 225 (714)
...++|+.|+|++|.|+.. ++..+ ...++|++|+|++|.|+. .++..+...+.|+ .|+|++|.|+..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L-~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~-~L~Ls~N~i~~~g~~ 229 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGL-AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQ-ELNVAYNGAGDTAAL 229 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHH-HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCC-EEECCSSCCCHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHH-hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcC-eEECCCCCCCHHHHH
Confidence 1235566666666666421 22222 234566666666666653 2234445556677 777777777642
Q ss_pred -cCccccCCCCcccccCcCCcCCC
Q 005102 226 -IPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 226 -~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
++..+...++|+.||+++|.++.
T Consensus 230 ~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 230 ALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHHhCCCCCEEeccCCCCCH
Confidence 34455567888888888888764
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.2e-13 Score=147.33 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=124.2
Q ss_pred CcEEEEEcCCCCccccCCccccCC-----CCCCEEEccCCCCcccCChhh-cCCCCCCEEEcCCCcCcccCCccc-----
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSL-----TDLRHVNLRNNKFFGSLPLEL-LEAQGLQSLVLYGNSFSGSVPNEI----- 132 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~----- 132 (714)
..++.|+|++|.++..-...|... ++|++|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 578899999999987544444333 799999999999975433333 245689999999999975544444
Q ss_pred CCCCCCCEEeccCccCCC----CCCcccccccccceeecccCcCCCC----CCcccccCccccccccccCCcccc----c
Q 005102 133 GKLKYLQILDLSQNFFNG----SLPVSIVQCKRLKALDLSQNNFTGP----LPNGFGSGLVSLEKLNLSFNKFNG----S 200 (714)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~~l~~L~~L~l~~N~l~g----~ 200 (714)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+.. ++..+ ...++|+.|+|++|.|+. .
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L-~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL-DRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG-GGCSCCCEEECCSSCCCHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH-hcCCCcCeEECCCCCCCHHHHHH
Confidence 356889999999999974 2445567789999999999998742 23333 246799999999999984 3
Q ss_pred CCCCCCCCcccccccccccccCCcCcCccccC
Q 005102 201 IPSNTGNLSSLQGTVDFSHNLFSGSIPASLGN 232 (714)
Q Consensus 201 ~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~ 232 (714)
++..+...++|+ .|+|++|.|+..-...+..
T Consensus 231 l~~~L~~~~~L~-~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 231 LARAAREHPSLE-LLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHCSSCC-EEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCC-EEeccCCCCCHHHHHHHHH
Confidence 444455567888 9999999998665555544
No 398
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=6.5e-11 Score=119.54 Aligned_cols=130 Identities=15% Similarity=0.181 Sum_probs=99.0
Q ss_pred cc-ccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC--ccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 411 LG-KSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN--IVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 411 lG-~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
++ .|..+.||++...+|..+++|...... ...+.+|+++++.+.+.+ +.+++++....+..++||||+++.+|.
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 44 455699999988778889999976542 245788999999996544 556888888777889999999998873
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS------------------------------------------ 525 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------ 525 (714)
... .+ ...++.++++.|..||+..
T Consensus 104 --~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 104 --SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp --TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred --cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 211 11 2367788888888888732
Q ss_pred -------------CCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 526 -------------PKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 526 -------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
+..++|+|++|.||+++++..+.|+||+.+..
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998763
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.12 E-value=2.8e-12 Score=146.07 Aligned_cols=174 Identities=11% Similarity=0.037 Sum_probs=93.3
Q ss_pred cEEEEEcCCCCcccc----CCccccCCCCCCEEEccCCCCc----ccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCC
Q 005102 65 RVVSVSIPKKKLLGF----LPSALGSLTDLRHVNLRNNKFF----GSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLK 136 (714)
Q Consensus 65 ~~~~l~l~~~~l~g~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~ 136 (714)
+++.|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|..+.+++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 455555555555444 3333445556666666666654 2233334455666666666666553 444555555
Q ss_pred CCCEEeccCccCC---CCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCC-CCCCCCcccc
Q 005102 137 YLQILDLSQNFFN---GSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP-SNTGNLSSLQ 212 (714)
Q Consensus 137 ~L~~L~Ls~N~l~---g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~ 212 (714)
+|+.|+++.+... +..+..+..+++|+.|+++++.. +.+|..+ ..+++|+.|+|++|.+++... ..+.++++|+
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~-~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILF-PFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGG-GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHH-hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 5555555532221 12334555666777777766533 2455544 346677777777777654333 2345566666
Q ss_pred cccccccccCCcCcCccccCCCCcccccCc
Q 005102 213 GTVDFSHNLFSGSIPASLGNLPEKVYIDLT 242 (714)
Q Consensus 213 ~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~ 242 (714)
.|++++|...+.++..+..+++|+.|+++
T Consensus 322 -~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 322 -VLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp -EEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred -EEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 66666332223334444556666666666
No 400
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=7.9e-10 Score=117.42 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=105.3
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeC--CCCc-hhHHHHHHHHHHHhccC--CCCccceEEEEEeC---CceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLG--EGGS-QRFKEFQTEVEAIGKIR--HSNIVTLRAYYWSV---DEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lV~e~~ 481 (714)
.++.|.++.||++...+ ..+++|+.. .... .....+.+|+++++.+. +..+.++++++.+. +..++||||+
T Consensus 45 ~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v 123 (359)
T 3dxp_A 45 QFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV 123 (359)
T ss_dssp ECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC
T ss_pred EcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec
Confidence 58889999999998764 678888876 4321 22346788999999997 45688899988766 4589999999
Q ss_pred CCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 005102 482 PNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS------------------------------------ 525 (714)
Q Consensus 482 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------ 525 (714)
++..+.+... ..++..++..++.++++.|+.||...
T Consensus 124 ~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 124 SGRVLWDQSL--------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCBCCCCTTC--------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred CCeecCCCcc--------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9877754211 34678889999999999999999731
Q ss_pred -------------------CCCceecCCCCCCeeeCCCCC--eEEcccchhhh
Q 005102 526 -------------------PKKYVHGDLKPSNILLGHNME--PHVSDFGLARL 557 (714)
Q Consensus 526 -------------------~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~ 557 (714)
+..++|+|+++.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246899999999999997753 68999998864
No 401
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.94 E-value=4e-09 Score=113.29 Aligned_cols=167 Identities=14% Similarity=0.122 Sum_probs=67.6
Q ss_pred EEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccC
Q 005102 66 VVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQ 145 (714)
Q Consensus 66 ~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 145 (714)
++.|.|+. ++...-+.+|.++++|+.++|++|+++. +|...+...+|+.+.|.+| ++..-...|.++++|+.++|..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 33344432 3333333444444444444444444442 2222222344444444422 3322333344444444444443
Q ss_pred ccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc-----ccCCCCCCCCcccccccccccc
Q 005102 146 NFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN-----GSIPSNTGNLSSLQGTVDFSHN 220 (714)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~~l~l~~N 220 (714)
| ++..-..+|.+ .+|+.+.| .|+++ .|+...+.++.+|+.+++.+|.+. ..-+..|.++.+|+ .++|. |
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~-~l~l~-~ 309 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA-RFEIP-E 309 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC-EECCC-T
T ss_pred C-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC-eEEeC-C
Confidence 3 22122222333 34444444 22232 333333344455555555444432 12223444444554 44444 2
Q ss_pred cCCcCcCccccCCCCcccccC
Q 005102 221 LFSGSIPASLGNLPEKVYIDL 241 (714)
Q Consensus 221 ~l~g~~p~~~~~l~~L~~l~l 241 (714)
.++..-..+|.++++|+.+++
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~l 330 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTI 330 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEE
T ss_pred ceEEEhhhhhcCCCCccEEEE
Confidence 344333344555555555554
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.89 E-value=4.8e-11 Score=119.70 Aligned_cols=21 Identities=10% Similarity=-0.067 Sum_probs=14.7
Q ss_pred CCcccceEecCC--cEEEEEcCC
Q 005102 53 PCSWNGITCKEQ--RVVSVSIPK 73 (714)
Q Consensus 53 ~c~w~gv~c~~~--~~~~l~l~~ 73 (714)
.|.|.|+.|... +|..+..++
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHhcCcEEECCCCCEEEEEEecC
Confidence 478999999743 666655544
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.87 E-value=9.9e-12 Score=141.52 Aligned_cols=180 Identities=9% Similarity=0.072 Sum_probs=108.4
Q ss_pred CcEEEEEcCCCCccccCC-ccccCCCCCCEEEccCCCCccc-CChhhcCCCCCCEEEcC---------CCcCcccCCccc
Q 005102 64 QRVVSVSIPKKKLLGFLP-SALGSLTDLRHVNLRNNKFFGS-LPLELLEAQGLQSLVLY---------GNSFSGSVPNEI 132 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~g~~p~~~ 132 (714)
.+++.|+|++|.+++... ..+..+++|++|+|++| ++.. ++.....+++|+.|+|+ .|.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 578999999999776533 33568899999999988 4422 22223357888888883 345543322223
Q ss_pred C-CCCCCCEEeccCccCCCCCCcccc-cccccceeecc--c----CcCCCCCCcc-----cccCccccccccccCCcccc
Q 005102 133 G-KLKYLQILDLSQNFFNGSLPVSIV-QCKRLKALDLS--Q----NNFTGPLPNG-----FGSGLVSLEKLNLSFNKFNG 199 (714)
Q Consensus 133 ~-~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~l~--~----N~l~g~~p~~-----~~~~l~~L~~L~l~~N~l~g 199 (714)
. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++ .|.. +...+++|+.|+|++ .+++
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 2 367777777777777655444444 46777777777 3 44542 2211 123356677777755 4544
Q ss_pred cCCCCCCC-CcccccccccccccCCcCcCccc-cCCCCcccccCcCCcCC
Q 005102 200 SIPSNTGN-LSSLQGTVDFSHNLFSGSIPASL-GNLPEKVYIDLTYNNLS 247 (714)
Q Consensus 200 ~~p~~~~~-l~~L~~~l~l~~N~l~g~~p~~~-~~l~~L~~l~l~~N~l~ 247 (714)
..+..+.. +++|+ .|++++|.+++..+..+ ..+++|+.|++++|+++
T Consensus 446 ~~~~~l~~~~~~L~-~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 446 KVFEYIGTYAKKME-MLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHHHCTTCC-EEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHHHHhchhcc-EeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 44334433 55666 66777776665544444 45666777777777664
No 404
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=1.2e-09 Score=113.08 Aligned_cols=134 Identities=19% Similarity=0.220 Sum_probs=98.4
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCC--ccceEEEEEeCC---ceeEEEeccCC
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSN--IVTLRAYYWSVD---EKLLIYDYIPN 483 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lV~e~~~~ 483 (714)
.++.|....||++. ..+++|+.... .....+.+|+++|+.+. +.. +.+++.+....+ ..|+|||+++|
T Consensus 27 ~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp EEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred ecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 58899999999864 56889986543 33467889999998884 333 345555443332 34899999999
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS-------------------------------------- 525 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------- 525 (714)
.++.+... ..++..++..++.++++.|+.||+..
T Consensus 101 ~~l~~~~~--------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 101 VPLTPLLL--------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp EECCHHHH--------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred eECCcccc--------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 88765332 23677788888999999999888611
Q ss_pred -----------------CCCceecCCCCCCeeeCC--CCCeEEcccchhhh
Q 005102 526 -----------------PKKYVHGDLKPSNILLGH--NMEPHVSDFGLARL 557 (714)
Q Consensus 526 -----------------~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~ 557 (714)
+..++|+|++|.||++++ ...+.|+||+.+..
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 134799999999999998 45678999998864
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.86 E-value=1.1e-08 Score=110.02 Aligned_cols=177 Identities=11% Similarity=0.074 Sum_probs=142.6
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEec
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDL 143 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 143 (714)
.+++.|+|++|+++..-..+|. .++|+.+.|.+| +...-...|.++++|+.++|..| ++..-...|.+ .+|+.+.|
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4789999999999987666776 689999999955 77666778999999999999976 55455556777 89999999
Q ss_pred cCccCCCCCCcccccccccceeecccCcCC----CCCCcccccCccccccccccCCcccccCCCCCCCCccccccccccc
Q 005102 144 SQNFFNGSLPVSIVQCKRLKALDLSQNNFT----GPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSH 219 (714)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~ 219 (714)
.|.++..-+..|.+|++|+.+++.+|.+. ..|+...+.++.+|+.++|. |.++-.-...|.++.+|+ .+.|..
T Consensus 256 -p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~-~l~lp~ 332 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT-QLTIPA 332 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC-EEEECT
T ss_pred -CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc-EEEECc
Confidence 45566455678999999999999998874 13666677889999999999 557744457888899999 999955
Q ss_pred ccCCcCcCccccCCCCcccccCcCCcCCCC
Q 005102 220 NLFSGSIPASLGNLPEKVYIDLTYNNLSGP 249 (714)
Q Consensus 220 N~l~g~~p~~~~~l~~L~~l~l~~N~l~~~ 249 (714)
| ++..-+.+|.++ +|+.+++++|.+...
T Consensus 333 ~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l 360 (401)
T 4fdw_A 333 N-VTQINFSAFNNT-GIKEVKVEGTTPPQV 360 (401)
T ss_dssp T-CCEECTTSSSSS-CCCEEEECCSSCCBC
T ss_pred c-ccEEcHHhCCCC-CCCEEEEcCCCCccc
Confidence 4 776667889999 999999999977643
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=3.8e-10 Score=119.17 Aligned_cols=181 Identities=16% Similarity=0.155 Sum_probs=124.3
Q ss_pred CcEEEEEcCCCCccc-c-------CCccccCCCCCCEEEccCCCCc---------ccCChhhcCCCCCCEEEcCCCcCcc
Q 005102 64 QRVVSVSIPKKKLLG-F-------LPSALGSLTDLRHVNLRNNKFF---------GSLPLELLEAQGLQSLVLYGNSFSG 126 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g-~-------~p~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~g 126 (714)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467788877666442 1 2344567889999999776431 235566678899999999988421
Q ss_pred cCCcccCCCCCCCEEeccCccCCCCCCcccc--cccccceeeccc--CcCCCC-----CCcccc-cCccccccccccCCc
Q 005102 127 SVPNEIGKLKYLQILDLSQNFFNGSLPVSIV--QCKRLKALDLSQ--NNFTGP-----LPNGFG-SGLVSLEKLNLSFNK 196 (714)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~~~~-~~l~~L~~L~l~~N~ 196 (714)
.++. +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+. ..+++|+.|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 3444 43 89999999998887643333343 688999999863 332222 111121 236899999999999
Q ss_pred ccccCCCCC---CCCcccccccccccccCCcC----cCccccCCCCcccccCcCCcCCC
Q 005102 197 FNGSIPSNT---GNLSSLQGTVDFSHNLFSGS----IPASLGNLPEKVYIDLTYNNLSG 248 (714)
Q Consensus 197 l~g~~p~~~---~~l~~L~~~l~l~~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~~ 248 (714)
+.+..+..+ ..+++|+ .|+|+.|.|+.. ++..+..+++|+.|++++|.++.
T Consensus 264 i~~~~~~~la~a~~~~~L~-~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLE-TMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp THHHHHHHHHHCSSGGGCS-EEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CchHHHHHHHhCccCCCCC-EEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 875443222 2578898 999999999864 44445677999999999998773
No 407
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.82 E-value=1.3e-10 Score=132.25 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=72.8
Q ss_pred CcEEEEEcCCCCccccCCcccc-CCCCCCEEEccCC-CCccc-CChhhcCCCCCCEEEcCCCcCcccCCcccC----CCC
Q 005102 64 QRVVSVSIPKKKLLGFLPSALG-SLTDLRHVNLRNN-KFFGS-LPLELLEAQGLQSLVLYGNSFSGSVPNEIG----KLK 136 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~----~l~ 136 (714)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|+.|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4667777777777666655554 5677777777776 44322 333344667777777777776654433332 455
Q ss_pred CCCEEeccCcc--CCC-CCCcccccccccceeecccC-cCCCCCCcccccCcccccccccc
Q 005102 137 YLQILDLSQNF--FNG-SLPVSIVQCKRLKALDLSQN-NFTGPLPNGFGSGLVSLEKLNLS 193 (714)
Q Consensus 137 ~L~~L~Ls~N~--l~g-~~p~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~~l~~L~~L~l~ 193 (714)
+|+.|+|++|. ++. .++..+..+++|+.|+|++| .+. .+|..+ ..+++|+.|+++
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~-~~~~~L~~L~l~ 243 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLL-QRAPQLEELGTG 243 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHH-HHCTTCSEEECS
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHH-hcCCcceEcccc
Confidence 77777777775 111 01111234567777777766 333 244433 235666666633
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.62 E-value=2.4e-09 Score=113.05 Aligned_cols=176 Identities=16% Similarity=0.179 Sum_probs=119.2
Q ss_pred CcEEEEEcCCCCc---------cccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccC-
Q 005102 64 QRVVSVSIPKKKL---------LGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIG- 133 (714)
Q Consensus 64 ~~~~~l~l~~~~l---------~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~- 133 (714)
.+++.|.|..+.. .+.++..+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......++
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 4777887765432 1235566778899999999988311 2343 3 388999999999887654444444
Q ss_pred -CCCCCCEEeccC--ccCCCC-----CCccc--ccccccceeecccCcCCCCCCcccc--cCccccccccccCCccccc-
Q 005102 134 -KLKYLQILDLSQ--NFFNGS-----LPVSI--VQCKRLKALDLSQNNFTGPLPNGFG--SGLVSLEKLNLSFNKFNGS- 200 (714)
Q Consensus 134 -~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~--~~l~~L~~L~l~~N~l~g~- 200 (714)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.+..+..+. ..+++|+.|+|+.|.+.+.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 789999999863 332221 11122 2478999999999998754333332 1478999999999999863
Q ss_pred ---CCCCCCCCcccccccccccccCCcCcCccccC-CCCcccccCcCCc
Q 005102 201 ---IPSNTGNLSSLQGTVDFSHNLFSGSIPASLGN-LPEKVYIDLTYNN 245 (714)
Q Consensus 201 ---~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~-l~~L~~l~l~~N~ 245 (714)
++..+.++++|+ .|++++|.++...-..+.. + ...++++.|+
T Consensus 296 ~~~L~~~L~~l~~L~-~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLK-FINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHTTHHHHTTCS-EEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHhhcccCCcce-EEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 555556678899 9999999987543333332 2 2457777766
No 409
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=1.6e-07 Score=97.70 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=99.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCC----CCccceEEEEEeCCceeEEEeccCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH----SNIVTLRAYYWSVDEKLLIYDYIPNG 484 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lV~e~~~~g 484 (714)
..++.|....||++ |..+++|+..... ....+.+|.+++..+.+ ..+.+++++ +..++||||+++.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 46889999999998 6778888875422 23568899999988865 224455554 5779999999998
Q ss_pred CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCC--------------------------------------
Q 005102 485 SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSP-------------------------------------- 526 (714)
Q Consensus 485 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~-------------------------------------- 526 (714)
++..... ..++..++..++.++++.|+.||+...
T Consensus 113 ~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 113 RITYEQY--------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ccccccc--------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 8864332 236677788888999999998885322
Q ss_pred ----------------------CCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 527 ----------------------KKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 527 ----------------------~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
..++|+|++|.||+++++..+.|+||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 1349999999999999876679999998864
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=2.6e-08 Score=99.77 Aligned_cols=106 Identities=24% Similarity=0.245 Sum_probs=72.8
Q ss_pred ccCCCCCCE--EEccCCCCc---ccCChhhcCCCCCCEEEcCCCcCcc--cCCcccCCCCCCCEEeccCccCCCCCCccc
Q 005102 84 LGSLTDLRH--VNLRNNKFF---GSLPLELLEAQGLQSLVLYGNSFSG--SVPNEIGKLKYLQILDLSQNFFNGSLPVSI 156 (714)
Q Consensus 84 ~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 156 (714)
|...+.|+. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455554 667777433 2222233467888888888888887 5566777888899999999988854 345
Q ss_pred cccc--ccceeecccCcCCCCCCcc------cccCcccccccc
Q 005102 157 VQCK--RLKALDLSQNNFTGPLPNG------FGSGLVSLEKLN 191 (714)
Q Consensus 157 ~~l~--~L~~L~l~~N~l~g~~p~~------~~~~l~~L~~L~ 191 (714)
..+. +|++|+|++|.+.+.+|.. +...+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 5555 8889999999988777632 223477888776
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.47 E-value=4.1e-07 Score=92.93 Aligned_cols=74 Identities=19% Similarity=0.257 Sum_probs=60.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCC---CccceEEEEEeCCceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHS---NIVTLRAYYWSVDEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lV~e~~~~gs 485 (714)
+.|+.|.++.||++...+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999999989999999997654333335789999999999865 577887763 4799999999987
Q ss_pred H
Q 005102 486 L 486 (714)
Q Consensus 486 L 486 (714)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 412
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=1.1e-06 Score=90.67 Aligned_cols=134 Identities=19% Similarity=0.200 Sum_probs=96.1
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCC---CccceEEEEE-eCCceeEEEeccCCCC
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHS---NIVTLRAYYW-SVDEKLLIYDYIPNGS 485 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lV~e~~~~gs 485 (714)
.++.|....||+. |..+++|+... ......+.+|.++|+.+.+. .+.+++.++. ..+..++||||++|..
T Consensus 26 ~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 26 SLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred ecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 5778888899988 56788888532 23346789999999999653 3566777764 3456789999999988
Q ss_pred HhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005102 486 LATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEF----------------------------------------- 524 (714)
Q Consensus 486 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~----------------------------------------- 524 (714)
+.+..- ..++..++..++.++++.|+.||+.
T Consensus 100 l~~~~~--------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 100 LGEDGM--------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CHHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred Cchhhh--------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 766322 2245556666666666666666642
Q ss_pred ----------------CCCCceecCCCCCCeeeCC---CCC-eEEcccchhhh
Q 005102 525 ----------------SPKKYVHGDLKPSNILLGH---NME-PHVSDFGLARL 557 (714)
Q Consensus 525 ----------------~~~~ivHrDlkp~NILl~~---~~~-~kl~DFGla~~ 557 (714)
.+..++|+|+++.||++++ ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1234699999999999987 455 48999998764
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=1.8e-08 Score=95.96 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=72.3
Q ss_pred cCCccccCCCCCCEEEccCC-CCccc----CChhhcCCCCCCEEEcCCCcCccc----CCcccCCCCCCCEEeccCccCC
Q 005102 79 FLPSALGSLTDLRHVNLRNN-KFFGS----LPLELLEAQGLQSLVLYGNSFSGS----VPNEIGKLKYLQILDLSQNFFN 149 (714)
Q Consensus 79 ~~p~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 149 (714)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|+.|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455666777778888777 77532 344455567777788877777532 2333445567777888887776
Q ss_pred CC----CCcccccccccceeec--ccCcCCCCCCcccc---cCccccccccccCCccc
Q 005102 150 GS----LPVSIVQCKRLKALDL--SQNNFTGPLPNGFG---SGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 150 g~----~p~~~~~l~~L~~L~l--~~N~l~g~~p~~~~---~~l~~L~~L~l~~N~l~ 198 (714)
.. +...+...++|++|+| ++|.+...-...+. ...++|+.|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 42 3445556667777777 66777532111111 12356666777766664
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=1.8e-06 Score=87.37 Aligned_cols=134 Identities=16% Similarity=0.199 Sum_probs=97.3
Q ss_pred ccccCce-EEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEeccCCCCHh
Q 005102 411 LGKSGIG-IVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDYIPNGSLA 487 (714)
Q Consensus 411 lG~G~~g-~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 487 (714)
+..|..+ .||+..... +..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||++++.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 4445554 699987654 678889986543 2356788999998884 334678899999889999999999998877
Q ss_pred hhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 005102 488 TALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFS------------------------------------------ 525 (714)
Q Consensus 488 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------ 525 (714)
+..... ......++.+++..|+-||...
T Consensus 109 ~~~~~~----------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 109 QVLEEY----------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHC----------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccCC----------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 654321 1223456667777777777421
Q ss_pred -------------CCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 526 -------------PKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 526 -------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
+..++|+|+.+.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999877778999998763
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.29 E-value=1.2e-07 Score=90.23 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=89.3
Q ss_pred CCcEEEEEcCCC-Ccccc----CCccccCCCCCCEEEccCCCCccc----CChhhcCCCCCCEEEcCCCcCccc----CC
Q 005102 63 EQRVVSVSIPKK-KLLGF----LPSALGSLTDLRHVNLRNNKFFGS----LPLELLEAQGLQSLVLYGNSFSGS----VP 129 (714)
Q Consensus 63 ~~~~~~l~l~~~-~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~----~p 129 (714)
...++.|+|++| .+... +...+...++|++|+|++|.|... +...+...++|+.|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 568999999999 88753 556777889999999999999742 445566678999999999999753 45
Q ss_pred cccCCCCCCCEEec--cCccCCCC----CCcccccccccceeecccCcCC
Q 005102 130 NEIGKLKYLQILDL--SQNFFNGS----LPVSIVQCKRLKALDLSQNNFT 173 (714)
Q Consensus 130 ~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 173 (714)
..+...++|+.|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66778889999999 88999753 3344556689999999999885
No 416
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=2.5e-06 Score=90.18 Aligned_cols=73 Identities=10% Similarity=0.003 Sum_probs=55.9
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC--ccceEEEEEeC-CceeEEEeccCCCC
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN--IVTLRAYYWSV-DEKLLIYDYIPNGS 485 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lV~e~~~~gs 485 (714)
..++.|....+|+... +|..+++|..... ..+.+|+.++..+.... +.++++++... +..++||||+++..
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 3578899999999986 5788999987543 25888999999886533 56777777654 56899999998765
Q ss_pred Hh
Q 005102 486 LA 487 (714)
Q Consensus 486 L~ 487 (714)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.26 E-value=1.2e-06 Score=92.67 Aligned_cols=79 Identities=9% Similarity=0.001 Sum_probs=55.8
Q ss_pred cc-cccCceEEEEEEEC-------CCcEEEEEEeCCCC---chhHHHHHHHHHHHhccC-C--CCccceEEEEEeC---C
Q 005102 410 VL-GKSGIGIVYKVVLE-------DGHTLAVRRLGEGG---SQRFKEFQTEVEAIGKIR-H--SNIVTLRAYYWSV---D 472 (714)
Q Consensus 410 ~l-G~G~~g~Vy~~~~~-------~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~---~ 472 (714)
.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+. + -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 56 77888999998764 26788898875432 101135778999998884 3 3567788887654 3
Q ss_pred ceeEEEeccCCCCHhh
Q 005102 473 EKLLIYDYIPNGSLAT 488 (714)
Q Consensus 473 ~~~lV~e~~~~gsL~~ 488 (714)
..++||||+++..+.+
T Consensus 107 ~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 107 TPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SCEEEEECCCCBCCCB
T ss_pred CceEEEEecCCCChhh
Confidence 5689999999876653
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.90 E-value=3.1e-05 Score=82.99 Aligned_cols=74 Identities=7% Similarity=0.115 Sum_probs=49.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeCCCCc-------hhHHHHHHHHHHHhccCC--CC-ccceEEEEEeCCceeEE
Q 005102 409 FVLGKSGIGIVYKVVLE-DGHTLAVRRLGEGGS-------QRFKEFQTEVEAIGKIRH--SN-IVTLRAYYWSVDEKLLI 477 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~n-iv~l~~~~~~~~~~~lV 477 (714)
+.+|.|.++.||++... +++.++||....... .....+..|.++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999764 468899998653211 122456789999888742 33 3455543 45567899
Q ss_pred EeccCCC
Q 005102 478 YDYIPNG 484 (714)
Q Consensus 478 ~e~~~~g 484 (714)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=6.4e-05 Score=78.50 Aligned_cols=142 Identities=19% Similarity=0.229 Sum_probs=80.0
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-----CCCccceE-E--EEEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-----HSNIVTLR-A--YYWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lV~e~~ 481 (714)
.|+.|..+.||++...+| .+++|+.... ..++..|++++..+. .|.++... | +....+..++||||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 456667889999988655 5889998752 133445566655553 34444310 0 122356678999999
Q ss_pred CCCCHh--------------hhhhCCCC-C-----C--CcCCCCHHHH-------------------------------H
Q 005102 482 PNGSLA--------------TALHGKPG-M-----V--SFTPVPWSVR-------------------------------V 508 (714)
Q Consensus 482 ~~gsL~--------------~~l~~~~~-~-----~--~~~~l~~~~~-------------------------------~ 508 (714)
++..+. ..+|.... . . ....-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11221100 0 0 0001123221 0
Q ss_pred HHHHHHHHHHHHHhc----------CCCCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 509 KIIKGIAKGLVYLHE----------FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 509 ~i~~~ia~gL~~LH~----------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
.+...+..++++|+. ..+..++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 123689999999999999888889999999775
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.61 E-value=0.00028 Score=71.82 Aligned_cols=73 Identities=21% Similarity=0.301 Sum_probs=54.7
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC-C--CCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-H--SNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.+|.|..+.||+.+..||+.|++|+...........|..|++.|+.+. . --+.+++++ +..++||||++.+..
T Consensus 22 ~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 22 ERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERPP 97 (288)
T ss_dssp EEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCCC
T ss_pred ecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccCC
Confidence 589999999999999999999999876554443356889999998884 2 134455554 245899999987643
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.58 E-value=0.00023 Score=73.16 Aligned_cols=139 Identities=14% Similarity=0.113 Sum_probs=91.7
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccC---CCCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR---HSNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++..+
T Consensus 43 ~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 43 KLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 578899999999986 4678889987643 2467889999999884 35688899988888889999999998764
Q ss_pred hh-----------hhhCCCCCCCc----------------CCCCHHHHH---HHHH----------------HHHHH-HH
Q 005102 487 AT-----------ALHGKPGMVSF----------------TPVPWSVRV---KIIK----------------GIAKG-LV 519 (714)
Q Consensus 487 ~~-----------~l~~~~~~~~~----------------~~l~~~~~~---~i~~----------------~ia~g-L~ 519 (714)
.. .||.......+ ..-+|.... ++.. .+... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 23332110000 012465321 1111 11111 22
Q ss_pred HHhc-CCCCCceecCCCCCCeeeCCCCCeEEcccc
Q 005102 520 YLHE-FSPKKYVHGDLKPSNILLGHNMEPHVSDFG 553 (714)
Q Consensus 520 ~LH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 553 (714)
.|.. ..+..++|+|+.+.||+++.++ +.|.||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3421 1224799999999999999887 8999984
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=0.00023 Score=76.72 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=45.1
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeCCC------C-c--hhHHHHHHHHHHHhc-cCCCCccceEEEEEeCCceeEEE
Q 005102 409 FVLGKSGIGIVYKVVLEDGHTLAVRRLGEG------G-S--QRFKEFQTEVEAIGK-IRHSNIVTLRAYYWSVDEKLLIY 478 (714)
Q Consensus 409 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~------~-~--~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lV~ 478 (714)
+.+|.|..+.||++.. ++..++||..... . . .....+..|+..+.. .....+.+++.+. .+..++||
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~ 116 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM 116 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence 3588899999999965 4678999943211 1 1 122344444443322 2234566777665 56789999
Q ss_pred ecc-CC
Q 005102 479 DYI-PN 483 (714)
Q Consensus 479 e~~-~~ 483 (714)
||+ ++
T Consensus 117 e~l~~g 122 (420)
T 2pyw_A 117 RYLEPP 122 (420)
T ss_dssp CCCCTT
T ss_pred eecCCc
Confidence 999 76
No 423
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.44 E-value=0.0003 Score=75.13 Aligned_cols=171 Identities=14% Similarity=0.077 Sum_probs=87.8
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCc--------------------
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNS-------------------- 123 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------------- 123 (714)
..++.+.|+.+ +...-...|.++.+|+.+++..| ++-.-...|.+...|+.+.+..+.
T Consensus 162 ~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~ 239 (394)
T 4fs7_A 162 ESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPD 239 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECT
T ss_pred CCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECC
Confidence 46777777654 34444567777888888888765 332333444455544444443321
Q ss_pred -CcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCC
Q 005102 124 -FSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIP 202 (714)
Q Consensus 124 -l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p 202 (714)
++..-...+.+..+|+.+.+..|... .-...|..+..|+.+.+..+. ++...+.++.+|+.+.+.++ ++..-.
T Consensus 240 ~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~~I~~ 313 (394)
T 4fs7_A 240 SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VKFIGE 313 (394)
T ss_dssp TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CCEECT
T ss_pred CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCcee----eccccccccccccccccccc-cceech
Confidence 11112234556677888887766543 334455555666655554443 22223334555555555433 331222
Q ss_pred CCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCC
Q 005102 203 SNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYN 244 (714)
Q Consensus 203 ~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 244 (714)
..|.++.+|+ .+++.++ ++..-..+|.++.+|+.+++..|
T Consensus 314 ~aF~~c~~L~-~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 314 EAFESCTSLV-SIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTTCTTCC-EECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred hhhcCCCCCC-EEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3445555555 5555322 44333445555555555555443
No 424
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.43 E-value=0.00053 Score=73.17 Aligned_cols=152 Identities=11% Similarity=0.072 Sum_probs=95.4
Q ss_pred cccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCccccccccc
Q 005102 83 ALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRL 162 (714)
Q Consensus 83 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 162 (714)
.....+.|+.+.+.++ ++..-...+....+|+.+.+..+..+ .-...|.....|+.+.+..+.+. ...|..+.+|
T Consensus 225 ~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L 299 (394)
T 4fs7_A 225 FALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSL 299 (394)
T ss_dssp TTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTC
T ss_pred hhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccc
Confidence 3444567777777653 33234455667777888877766543 44556677777777777665432 2356677777
Q ss_pred ceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCc
Q 005102 163 KALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLT 242 (714)
Q Consensus 163 ~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~ 242 (714)
+.+.+.++ ++ .|+...+.++.+|+.++|.++ ++..-...|.++.+|+ .+.+..| ++..-..+|.++++|+.+++.
T Consensus 300 ~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~-~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 300 TEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLS-NINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCC-EECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCC-EEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 77777654 43 455555556777777777644 5522245667777777 7777655 554455677777777777765
Q ss_pred CC
Q 005102 243 YN 244 (714)
Q Consensus 243 ~N 244 (714)
.+
T Consensus 375 ~~ 376 (394)
T 4fs7_A 375 KR 376 (394)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 425
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.39 E-value=0.00049 Score=73.46 Aligned_cols=129 Identities=16% Similarity=0.177 Sum_probs=51.3
Q ss_pred hhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccc
Q 005102 107 ELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVS 186 (714)
Q Consensus 107 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~ 186 (714)
.|.++.+|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|.+|.+|+.++|..| ++ .|....+.++.+
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCC
Confidence 3444445555555433322 223334444555555553 2233222234445555555555433 22 333333344555
Q ss_pred cccccccCCcccccCC-CCCCCCcccccccccccccCCcCcCccccCCCCcccccCcCCc
Q 005102 187 LEKLNLSFNKFNGSIP-SNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNN 245 (714)
Q Consensus 187 L~~L~l~~N~l~g~~p-~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 245 (714)
|+.+.|..+ ++ .|. ..|.++.+|+ .+++.+|.... .++....+|+.+.+..|.
T Consensus 336 L~~i~ip~s-v~-~I~~~aF~~C~~L~-~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 336 LERIAIPSS-VT-KIPESAFSNCTALN-NIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CCEEEECTT-CC-BCCGGGGTTCTTCC-EEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCEEEECcc-cC-EEhHhHhhCCCCCC-EEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 555555332 33 222 3444555555 55554443221 234444555555554443
No 426
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.28 E-value=0.0015 Score=69.69 Aligned_cols=106 Identities=13% Similarity=0.257 Sum_probs=49.4
Q ss_pred CCCCCCCEEeccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccc
Q 005102 133 GKLKYLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQ 212 (714)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 212 (714)
.+..+|+.+.+..+..+ .-...|.++.+|+.+.+. +.++ .|+...+.++.+|+.++|..| ++..-...|.++.+|+
T Consensus 262 ~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 262 DSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 33444455444433322 222344455555555553 2233 344444445555666555543 3312224455555555
Q ss_pred cccccccccCCcCcCccccCCCCcccccCcCC
Q 005102 213 GTVDFSHNLFSGSIPASLGNLPEKVYIDLTYN 244 (714)
Q Consensus 213 ~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~N 244 (714)
.+.+..+ ++..-..+|.++++|+.+++.+|
T Consensus 338 -~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 338 -RIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp -EEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred -EEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 5555332 44333445556666665555544
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.27 E-value=0.00052 Score=70.22 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=43.7
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCc-cceEEEEEeCCceeEEEecc-CCCCH
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNI-VTLRAYYWSVDEKLLIYDYI-PNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~-~~gsL 486 (714)
.|+.|....+|++ ..+++|+........ ....+|+.+++.+....+ .+++++ ..+.-++|+||+ ++.++
T Consensus 25 ~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 25 ERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred EcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 5788888999999 568888876542211 123568888877743333 455544 344568999999 55433
No 428
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.19 E-value=0.002 Score=68.24 Aligned_cols=153 Identities=12% Similarity=0.104 Sum_probs=92.3
Q ss_pred ccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEeccCccCCCCCCcccccccccc
Q 005102 84 LGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILDLSQNFFNGSLPVSIVQCKRLK 163 (714)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 163 (714)
+.....+..+.+..+.- ......+....+|+.+.+..+ ++..-...+.+..+|+.+.+..+ ++..-...|.++.+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 44445555555554322 234455566667777777654 33244445666777777777655 4433345566777777
Q ss_pred eeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccCCcCcCccccCCCCcccccCcC
Q 005102 164 ALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTY 243 (714)
Q Consensus 164 ~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 243 (714)
.+.+..+ +. .++...+.++.+|+.+.+.+|.++..-...|.++.+|+ .+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 267 ~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~-~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 267 TLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLS-SVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCC-EEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCC-EEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 7777544 33 45555556677777777777777633345667777777 7777543 5544456777777777776643
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.18 E-value=6.6e-05 Score=69.64 Aligned_cols=82 Identities=11% Similarity=0.079 Sum_probs=33.4
Q ss_pred CCCEEEccCCCCcccCChhhcCCCCCCEEEcCCCc-CcccCCcccCCC----CCCCEEeccCcc-CCCCCCccccccccc
Q 005102 89 DLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGNS-FSGSVPNEIGKL----KYLQILDLSQNF-FNGSLPVSIVQCKRL 162 (714)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L 162 (714)
.|++|||+++.++..-=..+.++++|+.|+|+++. +++.--..++.+ ++|+.|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555544432222223344445555554442 332222223332 245555555542 332111223445555
Q ss_pred ceeecccC
Q 005102 163 KALDLSQN 170 (714)
Q Consensus 163 ~~L~l~~N 170 (714)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.14 E-value=0.00092 Score=72.06 Aligned_cols=70 Identities=10% Similarity=0.128 Sum_probs=48.4
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCc-cceEEEEEeCCceeEEEec
Q 005102 410 VLGKSGIGIVYKVVLED--------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNI-VTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~ 480 (714)
.|+.|....||++...+ +..+++|+...... ...+.+|..+++.+...++ .++++.+.. .+||||
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 57778889999998763 47899998854221 1455689999988853334 567766532 389999
Q ss_pred cCCCC
Q 005102 481 IPNGS 485 (714)
Q Consensus 481 ~~~gs 485 (714)
+++.+
T Consensus 154 l~G~~ 158 (429)
T 1nw1_A 154 IPSRP 158 (429)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 97633
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.10 E-value=0.0033 Score=65.00 Aligned_cols=144 Identities=15% Similarity=0.116 Sum_probs=81.3
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC--ccceEEE-----EEeCCceeEEEeccC
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN--IVTLRAY-----YWSVDEKLLIYDYIP 482 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lV~e~~~ 482 (714)
.++ |....||++...+|+.+++|....... ....+..|..++..+.... +.+++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 777899998887788899999874322 2356677888887774222 3344432 122445678999998
Q ss_pred CCCHh-----hh---------hhCC---CCCCCcCCCCHHHH----------------------HHHHHHHHHHHHHHhc
Q 005102 483 NGSLA-----TA---------LHGK---PGMVSFTPVPWSVR----------------------VKIIKGIAKGLVYLHE 523 (714)
Q Consensus 483 ~gsL~-----~~---------l~~~---~~~~~~~~l~~~~~----------------------~~i~~~ia~gL~~LH~ 523 (714)
+..+. .. +|.. ........+++... ...+..++..+.-+..
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 74432 00 1110 00000011222211 1111222222222211
Q ss_pred -CCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 524 -FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 524 -~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
..+..++|+|+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1235689999999999999 4 899999987754
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.05 E-value=0.0022 Score=66.53 Aligned_cols=142 Identities=13% Similarity=0.094 Sum_probs=73.0
Q ss_pred cccccCceE-EEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCC--CCccceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGI-VYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRH--SNIVTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.|+.|.... +|+....+|..+++|....... ..+..|++++..+.. -.+.+++.+.. +.-++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcch
Confidence 355554444 6677654467787876554321 233557777776642 23556666533 233789999977666
Q ss_pred hhhhhCC---------------------CCCCCcCCCCHHHHH-------H-------------HHHHHHHHHHHHh---
Q 005102 487 ATALHGK---------------------PGMVSFTPVPWSVRV-------K-------------IIKGIAKGLVYLH--- 522 (714)
Q Consensus 487 ~~~l~~~---------------------~~~~~~~~l~~~~~~-------~-------------i~~~ia~gL~~LH--- 522 (714)
.+.+... ... ....++..... . ....+...++.+.
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTP-ELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCC-CCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCc-cCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 5443211 000 00111111100 0 0001111222221
Q ss_pred cCCCCCceecCCCCCCeeeCCC----CCeEEcccchhhh
Q 005102 523 EFSPKKYVHGDLKPSNILLGHN----MEPHVSDFGLARL 557 (714)
Q Consensus 523 ~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~ 557 (714)
...+..++|+|+.+.||+++.+ ..+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123579999999999999874 6789999998764
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.05 E-value=0.00058 Score=70.55 Aligned_cols=144 Identities=13% Similarity=0.102 Sum_probs=79.1
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC--ccceEEE------EEeCCceeEEEecc
Q 005102 410 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN--IVTLRAY------YWSVDEKLLIYDYI 481 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~------~~~~~~~~lV~e~~ 481 (714)
.|+.|....+|+....+| .+++|....... ...+..|++++..+.... +.+++.. ....+..+++|+|+
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~--~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCCCC--HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 467788889999988666 688998876311 134556777777764222 2333311 12235678999999
Q ss_pred CCCCHhh--------------hhhCCC-CC-CC----cCCCCHHHHHH------------HHHHHHHHHHHHhc----CC
Q 005102 482 PNGSLAT--------------ALHGKP-GM-VS----FTPVPWSVRVK------------IIKGIAKGLVYLHE----FS 525 (714)
Q Consensus 482 ~~gsL~~--------------~l~~~~-~~-~~----~~~l~~~~~~~------------i~~~ia~gL~~LH~----~~ 525 (714)
++..+.. .+|... .. .. .....|..... +...+...+++++. ..
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8754321 122110 00 00 00012322110 01123445555553 12
Q ss_pred CCCceecCCCCCCeeeCCCCCeEEcccchhh
Q 005102 526 PKKYVHGDLKPSNILLGHNMEPHVSDFGLAR 556 (714)
Q Consensus 526 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 556 (714)
+..++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3579999999999999887656899999775
No 434
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.02 E-value=0.0033 Score=66.49 Aligned_cols=164 Identities=10% Similarity=0.016 Sum_probs=112.4
Q ss_pred CccccCCccccCCCCCCEEEccCCCCccc------------CChhhcCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEe
Q 005102 75 KLLGFLPSALGSLTDLRHVNLRNNKFFGS------------LPLELLEAQGLQSLVLYGNSFSGSVPNEIGKLKYLQILD 142 (714)
Q Consensus 75 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~------------~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 142 (714)
.++..-...+.....|+.+.+..+..... ....+.....+..+.+..+.-. .....+....+|+.+.
T Consensus 145 ~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~ 223 (379)
T 4h09_A 145 SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKIT 223 (379)
T ss_dssp TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEE
T ss_pred eeeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeecccccccccceee
Confidence 45555567788888888888876544211 1223344456666666544332 4455677778899988
Q ss_pred ccCccCCCCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCcccccCCCCCCCCcccccccccccccC
Q 005102 143 LSQNFFNGSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFNGSIPSNTGNLSSLQGTVDFSHNLF 222 (714)
Q Consensus 143 Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~~l~l~~N~l 222 (714)
+..+ +...-...+.++.+|+.+.+..+ ++ .|....+.++.+|+.+.+..+ +...-...|.++.+|+ .+.+.+|.+
T Consensus 224 ~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~-~i~l~~~~i 298 (379)
T 4h09_A 224 ITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT-KVVMDNSAI 298 (379)
T ss_dssp CCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC-EEEECCTTC
T ss_pred eccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccc-ccccccccc
Confidence 8765 33244567788899999998766 44 465556667888998888654 5423345677888998 888988888
Q ss_pred CcCcCccccCCCCcccccCcCC
Q 005102 223 SGSIPASLGNLPEKVYIDLTYN 244 (714)
Q Consensus 223 ~g~~p~~~~~l~~L~~l~l~~N 244 (714)
+..-..+|.++.+|+.+++..+
T Consensus 299 ~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 299 ETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CEECTTTTTTCTTCCEEECCTT
T ss_pred ceehhhhhcCCCCCCEEEcCcc
Confidence 8666778999999999888643
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.01 E-value=0.00022 Score=66.09 Aligned_cols=84 Identities=8% Similarity=0.067 Sum_probs=66.0
Q ss_pred CcEEEEEcCCCCccccCCccccCCCCCCEEEccCCC-CcccCChhhcCC----CCCCEEEcCCCc-CcccCCcccCCCCC
Q 005102 64 QRVVSVSIPKKKLLGFLPSALGSLTDLRHVNLRNNK-FFGSLPLELLEA----QGLQSLVLYGNS-FSGSVPNEIGKLKY 137 (714)
Q Consensus 64 ~~~~~l~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~g~~p~~~~~l~~ 137 (714)
-+++.|+|+++.++..--..+.++++|++|+|+++. ++..-=..+..+ ++|+.|+|+++. +|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876655678899999999999985 664333345554 379999999985 77544456788999
Q ss_pred CCEEeccCcc
Q 005102 138 LQILDLSQNF 147 (714)
Q Consensus 138 L~~L~Ls~N~ 147 (714)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.98 E-value=0.0017 Score=68.41 Aligned_cols=143 Identities=20% Similarity=0.233 Sum_probs=83.7
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEec
Q 005102 410 VLGKSGIGIVYKVVLED--------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+..|-...+|++...+ ++.+++|+.... ........+|.++++.+. +.-..++++++.+ .+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 45667778899998752 478999986442 223456678999998884 3333567766543 399999
Q ss_pred cCCCCHhhh-----------------hhCCCCCCCcCCC-CHHHHHHHHHHHHH-------------------HHHHHh-
Q 005102 481 IPNGSLATA-----------------LHGKPGMVSFTPV-PWSVRVKIIKGIAK-------------------GLVYLH- 522 (714)
Q Consensus 481 ~~~gsL~~~-----------------l~~~~~~~~~~~l-~~~~~~~i~~~ia~-------------------gL~~LH- 522 (714)
+++..|..- ||........... -|.++.++..++.. .+..|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 987554311 2222110000111 24555555544422 233332
Q ss_pred ---c-CCCCCceecCCCCCCeeeCCC----CCeEEcccchhhh
Q 005102 523 ---E-FSPKKYVHGDLKPSNILLGHN----MEPHVSDFGLARL 557 (714)
Q Consensus 523 ---~-~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~ 557 (714)
. ..+..++|+|+.+.||+++++ +.+.++||..|..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 123468999999999999876 7899999998763
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.97 E-value=0.0031 Score=68.34 Aligned_cols=72 Identities=14% Similarity=0.139 Sum_probs=46.9
Q ss_pred cccccCceEEEEEEECC-CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCc-cceEEEEEeCCceeEEEeccCCCCH
Q 005102 410 VLGKSGIGIVYKVVLED-GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNI-VTLRAYYWSVDEKLLIYDYIPNGSL 486 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~~~gsL 486 (714)
.|+.|-...+|++...+ +..+++|+........ -+-.+|..++..+...++ .++++++. + .+||||+++.+|
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 57778888999999875 5788899875432211 112578999988865444 46777662 2 359999987443
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.92 E-value=5.4e-05 Score=71.62 Aligned_cols=87 Identities=21% Similarity=0.254 Sum_probs=44.1
Q ss_pred ccCCCCCCEEEccCC-CCcc----cCChhhcCCCCCCEEEcCCCcCcccCCcc----cCCCCCCCEEeccCccCCCC---
Q 005102 84 LGSLTDLRHVNLRNN-KFFG----SLPLELLEAQGLQSLVLYGNSFSGSVPNE----IGKLKYLQILDLSQNFFNGS--- 151 (714)
Q Consensus 84 ~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~----~~~l~~L~~L~Ls~N~l~g~--- 151 (714)
+.+-+.|++|+|++| .|.. .+-..+..-+.|+.|+|++|++...--.. +..-+.|+.|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344456666666664 5532 13334444556666666666665322222 22335666666666666531
Q ss_pred -CCcccccccccceeecccC
Q 005102 152 -LPVSIVQCKRLKALDLSQN 170 (714)
Q Consensus 152 -~p~~~~~l~~L~~L~l~~N 170 (714)
+-..+..-+.|++|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1122223345666666644
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.83 E-value=0.002 Score=56.75 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=19.0
Q ss_pred CCCEEeccCccCCCCCCcccccccccceeecccCcCC
Q 005102 137 YLQILDLSQNFFNGSLPVSIVQCKRLKALDLSQNNFT 173 (714)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 173 (714)
+|+.|+|++|+|+..-+..|..+.+|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555333334455555555555555543
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.80 E-value=0.0014 Score=57.67 Aligned_cols=57 Identities=28% Similarity=0.408 Sum_probs=39.1
Q ss_pred CEEeccCccCC-CCCCcccccccccceeecccCcCCCCCCcccccCccccccccccCCccc
Q 005102 139 QILDLSQNFFN-GSLPVSIVQCKRLKALDLSQNNFTGPLPNGFGSGLVSLEKLNLSFNKFN 198 (714)
Q Consensus 139 ~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~l~~L~~L~l~~N~l~ 198 (714)
..++.+++.|+ ..+|..+. .+|+.|+|++|+|+ .+|...+..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 36677777775 35665443 35778888888887 576666666777777777777764
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.71 E-value=0.0024 Score=67.35 Aligned_cols=71 Identities=11% Similarity=0.112 Sum_probs=43.8
Q ss_pred cccccCceEEEEEEECC---------CcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCC-ccceEEEEEeCCceeEEEe
Q 005102 410 VLGKSGIGIVYKVVLED---------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSN-IVTLRAYYWSVDEKLLIYD 479 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lV~e 479 (714)
.++.|....+|++...+ +..+++|+....... ..+...|.++++.+...+ ..++++.. .-++|||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 46777788999998764 268888887653221 112367888888885333 34666544 2378999
Q ss_pred ccCCCC
Q 005102 480 YIPNGS 485 (714)
Q Consensus 480 ~~~~gs 485 (714)
|+++..
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998754
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.69 E-value=0.00047 Score=65.10 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=79.7
Q ss_pred ecCCcEEEEEcCCC-Cccc----cCCccccCCCCCCEEEccCCCCccc----CChhhcCCCCCCEEEcCCCcCccc----
Q 005102 61 CKEQRVVSVSIPKK-KLLG----FLPSALGSLTDLRHVNLRNNKFFGS----LPLELLEAQGLQSLVLYGNSFSGS---- 127 (714)
Q Consensus 61 c~~~~~~~l~l~~~-~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~---- 127 (714)
.+...++.|+|++| ++.. .+..++..-+.|+.|+|++|.|... +...+..-+.|+.|+|++|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34668999999986 6653 2556778889999999999999742 344555678999999999999742
Q ss_pred CCcccCCCCCCCEEeccCcc---CCCC----CCcccccccccceeecccCcC
Q 005102 128 VPNEIGKLKYLQILDLSQNF---FNGS----LPVSIVQCKRLKALDLSQNNF 172 (714)
Q Consensus 128 ~p~~~~~l~~L~~L~Ls~N~---l~g~----~p~~~~~l~~L~~L~l~~N~l 172 (714)
+-..+..-+.|+.|+|++|. +... +-..+..-++|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 23345556789999999763 3211 222344446788888877654
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.63 E-value=0.0055 Score=63.71 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=27.6
Q ss_pred CCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 527 KKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 527 ~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999987764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.30 E-value=0.0083 Score=63.48 Aligned_cols=144 Identities=20% Similarity=0.211 Sum_probs=82.1
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeCCCCch-----------hH-------HHHHHHHHHHhccC-CCCcc
Q 005102 410 VLGKSGIGIVYKVVLED--------GHTLAVRRLGEGGSQ-----------RF-------KEFQTEVEAIGKIR-HSNIV 462 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~-H~niv 462 (714)
.|..|-...+|++...+ +..|.+++....... .+ +....|..+++.+. |--..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45556777899988754 367888887543211 01 12235888888885 43455
Q ss_pred ceEEEEEeCCceeEEEeccCCCCHhh--h---------------hhCCCCCCCcCCC-CHHHHHHHHHHHH---------
Q 005102 463 TLRAYYWSVDEKLLIYDYIPNGSLAT--A---------------LHGKPGMVSFTPV-PWSVRVKIIKGIA--------- 515 (714)
Q Consensus 463 ~l~~~~~~~~~~~lV~e~~~~gsL~~--~---------------l~~~~~~~~~~~l-~~~~~~~i~~~ia--------- 515 (714)
++++++.. .+|+||+++-+|.. + +|........... -|....++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 67777632 28999998644421 1 1222111111111 2334444443331
Q ss_pred -------------HHHH----HHhc-CCCCCceecCCCCCCeeeCCC------CCeEEcccchhhh
Q 005102 516 -------------KGLV----YLHE-FSPKKYVHGDLKPSNILLGHN------MEPHVSDFGLARL 557 (714)
Q Consensus 516 -------------~gL~----~LH~-~~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla~~ 557 (714)
.-+. +|.. ..+..++|+|+.+.||+++++ +.+.++||..|..
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 2322 223468999999999999876 7899999988753
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.87 E-value=0.077 Score=50.36 Aligned_cols=100 Identities=12% Similarity=-0.065 Sum_probs=65.2
Q ss_pred CCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeeCCCCCeEEcccchhhhhhccCC
Q 005102 484 GSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARLANIAGG 563 (714)
Q Consensus 484 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 563 (714)
-+|.++|.... .++++.+++.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.+.+.+ ..+..
T Consensus 33 vSL~eIL~~~~-----~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~~------ 98 (229)
T 2yle_A 33 LSLEEILRLYN-----QPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADDA------ 98 (229)
T ss_dssp EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcC-----CCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-ccccc------
Confidence 37889887654 6799999999999999998776210 0111223346889999999888764 21110
Q ss_pred CCCccCCCCCCCCchhhhcccccceeecccCCCCCCccccCCcccCCCCCCchhhhHHHHHHHHHHHhC
Q 005102 564 SPTLQSNRMPAEKPQERQQKSVSLEVTTTNSSSNLGSYYQAPESLKVVKPSQKWDIYSYGVILLEMITG 632 (714)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DVwS~Gvvl~elltG 632 (714)
....+.|||... ...+.+.=|||+|+++|.-+--
T Consensus 99 ----------------------------------~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 99 ----------------------------------GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp ------------------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred ----------------------------------cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 011267888764 3457889999999999998863
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.25 E-value=0.022 Score=60.87 Aligned_cols=142 Identities=14% Similarity=0.139 Sum_probs=83.3
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeCCCCchhHHHHHHHHHHHhccC-CCCccceEEEEEeCCceeEEEec
Q 005102 410 VLGKSGIGIVYKVVLED--------GHTLAVRRLGEGGSQRFKEFQTEVEAIGKIR-HSNIVTLRAYYWSVDEKLLIYDY 480 (714)
Q Consensus 410 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~ 480 (714)
.+..|-...+|+....+ +..+++|+........ -+-.+|.++++.+. +.-..++++.+ .-++||||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEE
Confidence 46667778999998763 5789999875542211 12357888888884 33344566543 23789999
Q ss_pred cCCCCHhh--------------h---hhCCCC-----CC--CcCCCCHHHHHHHHHHH-------------------HHH
Q 005102 481 IPNGSLAT--------------A---LHGKPG-----MV--SFTPVPWSVRVKIIKGI-------------------AKG 517 (714)
Q Consensus 481 ~~~gsL~~--------------~---l~~~~~-----~~--~~~~l~~~~~~~i~~~i-------------------a~g 517 (714)
+++..|.. . +|.... .. ...+.-|.++.++..++ ...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 98865321 0 111100 00 01112244444444332 122
Q ss_pred HHHHhc---------------------CCCCCceecCCCCCCeeeCCCCCeEEcccchhhh
Q 005102 518 LVYLHE---------------------FSPKKYVHGDLKPSNILLGHNMEPHVSDFGLARL 557 (714)
Q Consensus 518 L~~LH~---------------------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 557 (714)
+.+|.+ ..+..++|+|+.+.||+ ++++.+.++||..|..
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 333321 11246899999999999 7788999999988764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.39 E-value=0.65 Score=49.08 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=25.1
Q ss_pred CceecCCCCCCeee------CCCCCeEEcccchhhh
Q 005102 528 KYVHGDLKPSNILL------GHNMEPHVSDFGLARL 557 (714)
Q Consensus 528 ~ivHrDlkp~NILl------~~~~~~kl~DFGla~~ 557 (714)
.++|+|+.+.|||+ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 448
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=89.26 E-value=0.034 Score=36.59 Aligned_cols=30 Identities=30% Similarity=0.470 Sum_probs=21.1
Q ss_pred CCCCcccEEEEeehhHHHHHHHHHHhheee
Q 005102 315 RGLSKSAIVAIIVSDVIGICLVGLLFSYCY 344 (714)
Q Consensus 315 ~~~s~~~iv~i~v~~~~~~~l~~~~~~~~~ 344 (714)
.+.+.++|++++++.++++.+++.+.++++
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 345677888888888887777666655443
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.53 E-value=2.3 Score=40.20 Aligned_cols=83 Identities=12% Similarity=0.085 Sum_probs=60.9
Q ss_pred CCCCccceEEEEEeCCceeEEEeccCCC-CHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCC
Q 005102 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNG-SLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLK 535 (714)
Q Consensus 457 ~H~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlk 535 (714)
.||+++.. .+-.+.+...+.|+.-+.+ ++.. + ..++...+++++..|+....+++. -+|--|.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i---------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~ 106 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I---------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLA 106 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G---------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCS
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H---------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEe
Confidence 58888876 4555566555556544322 2222 2 457789999999999998876665 3788899
Q ss_pred CCCeeeCCCCCeEEcccchh
Q 005102 536 PSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 536 p~NILl~~~~~~kl~DFGla 555 (714)
|+||+++.++.+++.-.|+-
T Consensus 107 P~NL~f~~~~~p~i~~RGik 126 (215)
T 4ann_A 107 PDELFFTRDGLPIAKTRGLQ 126 (215)
T ss_dssp GGGEEECTTSCEEESCCEET
T ss_pred cceEEEcCCCCEEEEEccCc
Confidence 99999999999999988864
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.06 E-value=2.3 Score=40.27 Aligned_cols=83 Identities=14% Similarity=0.112 Sum_probs=60.8
Q ss_pred CCCCccceEEEEEeCCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCceecCCC
Q 005102 457 RHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLV-YLHEFSPKKYVHGDLK 535 (714)
Q Consensus 457 ~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~-~LH~~~~~~ivHrDlk 535 (714)
.||++ -..+-.+.+...+.|+.-+++.=+..+ ..++...+++++..|+.... ++++ -+|--|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i---------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~ 111 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI---------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVC 111 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH---------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH---------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEe
Confidence 57888 344445666666777655443323333 34678899999999988776 5555 4788899
Q ss_pred CCCeeeCCCCCeEEcccchh
Q 005102 536 PSNILLGHNMEPHVSDFGLA 555 (714)
Q Consensus 536 p~NILl~~~~~~kl~DFGla 555 (714)
|+||++|.++.+++.-.|+-
T Consensus 112 P~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 112 PENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp GGGEEECTTCCEEESCCEET
T ss_pred CceEEEeCCCcEEEEEcCCc
Confidence 99999999999999999964
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.26 E-value=0.23 Score=53.63 Aligned_cols=54 Identities=6% Similarity=0.052 Sum_probs=14.5
Q ss_pred ceEEEEEEECC-CcEEEE------EEeCCCC--chhHHHHHHHHHHHhccCCCCccceEEEEE
Q 005102 416 IGIVYKVVLED-GHTLAV------RRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYW 469 (714)
Q Consensus 416 ~g~Vy~~~~~~-g~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 469 (714)
||.||+|.+.. ..+||| |..+... ......|.+|..++...+|||+++.+++..
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 99999999864 467888 7665432 223356888999999999999999988764
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=70.42 E-value=0.5 Score=32.10 Aligned_cols=7 Identities=14% Similarity=0.297 Sum_probs=2.6
Q ss_pred eehhHHH
Q 005102 326 IVSDVIG 332 (714)
Q Consensus 326 ~v~~~~~ 332 (714)
+++.+++
T Consensus 17 VVgGv~~ 23 (44)
T 2ks1_B 17 MVGALLL 23 (44)
T ss_dssp HHHHHHH
T ss_pred hhHHHHH
Confidence 3333333
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=69.73 E-value=0.47 Score=32.12 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=5.9
Q ss_pred EEEEeehhHHHHHHHH
Q 005102 322 IVAIIVSDVIGICLVG 337 (714)
Q Consensus 322 iv~i~v~~~~~~~l~~ 337 (714)
|++.+++.++++++++
T Consensus 12 IA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVG 27 (44)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred EEEeehHHHHHHHHHH
Confidence 3333344333333333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=46.32 E-value=1.7 Score=29.35 Aligned_cols=7 Identities=29% Similarity=0.681 Sum_probs=3.6
Q ss_pred EEEEeeh
Q 005102 322 IVAIIVS 328 (714)
Q Consensus 322 iv~i~v~ 328 (714)
++++++|
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4455555
No 455
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=32.67 E-value=4.4 Score=25.57 Aligned_cols=26 Identities=23% Similarity=0.469 Sum_probs=17.5
Q ss_pred CCcccEEEEeehhHHHHHHHHHHhhe
Q 005102 317 LSKSAIVAIIVSDVIGICLVGLLFSY 342 (714)
Q Consensus 317 ~s~~~iv~i~v~~~~~~~l~~~~~~~ 342 (714)
.+..++++|+++.+++.+++++.+++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHHHhh
Confidence 34556778888888777766665544
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.34 E-value=1.2e+02 Score=30.38 Aligned_cols=131 Identities=10% Similarity=0.052 Sum_probs=65.7
Q ss_pred cCceEEEEEEECCCcEEEEEEeCCCCchhHHHHHHHHHHHhccCCCCccceEEEE-----------------------Ee
Q 005102 414 SGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYY-----------------------WS 470 (714)
Q Consensus 414 G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-----------------------~~ 470 (714)
+|.+-||.+.. ++..|+||-.. ....+-|..++...-.+.-|+..- +.+. ..
T Consensus 79 ~Gstgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Ri-v~~~~~E~~e~~~~L~~~~~~~~~l~~l~ 153 (342)
T 1cja_A 79 KGTEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRV-VSSNSEEGTNMLECLAAIDKSFRVITTLA 153 (342)
T ss_dssp STTSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEE-EESSSHHHHHHHHHHHHHCSSSCHHHHHT
T ss_pred CCCCCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeE-EeeCcHHHHHHHHHHHHhhhhhHHHHHhh
Confidence 44556676666 57889999442 222234445555555555554211 1111 01
Q ss_pred CCceeEEEeccCCCCHhhhhhCCCCCCCcCCCCHHHHHHHHHHH--HHHHHHHhc-CCCCCcee-cCCCCCCeeeCCCCC
Q 005102 471 VDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGI--AKGLVYLHE-FSPKKYVH-GDLKPSNILLGHNME 546 (714)
Q Consensus 471 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i--a~gL~~LH~-~~~~~ivH-rDlkp~NILl~~~~~ 546 (714)
.+..+++|||.++..|.+.-+... ...+. .+.+.++ .-++.++.. ....+.+. .--.+.|||++++..
T Consensus 154 ~~~~~l~meyv~G~~L~e~~~~~~----~~~f~----~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 154 NQANILLMELVRGITLNKLTTTSA----PEVLT----KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp TCSEEEEEECCCEEESTTCCSSSH----HHHSC----HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred cccceehhhhcCCCccccchhhhh----hhhcC----HHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 123569999998755543211100 00121 1223332 234444443 22122222 235788999977554
Q ss_pred -eEEcccchhhh
Q 005102 547 -PHVSDFGLARL 557 (714)
Q Consensus 547 -~kl~DFGla~~ 557 (714)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88999998853
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.50 E-value=1.9e+02 Score=23.13 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=31.4
Q ss_pred CCccccCCccccCCCCCCEEEccCCCCcccCChhhcCCCCCCEEEcCCC
Q 005102 74 KKLLGFLPSALGSLTDLRHVNLRNNKFFGSLPLELLEAQGLQSLVLYGN 122 (714)
Q Consensus 74 ~~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 122 (714)
..++..-..+|.++++|+.+.|..+ ++.+-...|.++.+|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3445555567788888888887764 44344556777777777777653
Done!