BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005107
(714 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94KI8|TPC1_ARATH Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1
PE=1 SV=1
Length = 733
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/709 (69%), Positives = 577/709 (81%), Gaps = 34/709 (4%)
Query: 33 RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYF 92
RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF SA++YFIF + D IWSLNYF
Sbjct: 20 RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79
Query: 93 ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
AL+ LNF E+PLWC K SC DR+YYYLG+LPYLT ES++YE ITL IL++HTFF
Sbjct: 80 ALLFLNFFEQPLWCEKNP--KPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137
Query: 153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
PI+YEGS IFW S +KV C++IL D LV LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct: 138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197
Query: 213 NIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQ 272
+IR+LRDTL +L+GMLGTYLN+LAL +LFLLF+SW+A+V+FEDT QG VFTS+G TLYQ
Sbjct: 198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257
Query: 273 MFVLFTTSNNPDVWIPAY-------------------------------NFKSQLAKQVS 301
MF+LFTTSNNPDVWIPAY +FK QLAKQVS
Sbjct: 258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317
Query: 302 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDD 361
MD+M+RR L KAF LID+ G ++K QCIKLFE+L YRTLP IS+EEF LIFDELDD
Sbjct: 318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377
Query: 362 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMIS 421
T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS S++L+AF+RS FGY IS
Sbjct: 378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437
Query: 422 IILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQN 481
ILI+N +AV+VETTLDI+ESS Q WQ EFVFGWIYVLEMALKIY+YGFENYWR+G N
Sbjct: 438 FILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGAN 497
Query: 482 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 541
RFDFLVTWVIVIGET T +P+ TF SNGEWIRYLLLARMLRLIRLLM+VQ+YR F+AT
Sbjct: 498 RFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIAT 557
Query: 542 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYP 601
F+TLIPSLMPYLGTIFCV CIYCS+GVQ+FGG+VNAGN KL ET+LA+DDYLLFNFNDYP
Sbjct: 558 FITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNFNDYP 617
Query: 602 NGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFA 661
NGMVTLFNLLVMGNWQVWM+SYK+LTGT W++ YFVSFY+IT+LLLLNLV+AFVLEAFF
Sbjct: 618 NGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLEAFFT 677
Query: 662 EMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHMLSAELQK 710
E++LE EKC+ +D E R RRR G+K+RSQ+VD LLHHML EL K
Sbjct: 678 ELDLEEEEKCQGQDSQ-EKRNRRRSAGSKSRSQRVDTLLHHMLGDELSK 725
>sp|Q75VR1|TPC1A_TOBAC Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A
PE=2 SV=1
Length = 735
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/742 (67%), Positives = 591/742 (79%), Gaps = 42/742 (5%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ L+SGE+S + R RRR G ++F RR DAI GS YQKAAALVDLAEDGIGLPE
Sbjct: 2 EEYLLSGESSNSGRT----RRRIG--SIFDRR-DAIAHGSAYQKAAALVDLAEDGIGLPE 54
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
EIL+ +SFE +A+ YFIF +FD++WSLNY AL+VLNF EKPLWC+K SC +R+YY
Sbjct: 55 EILEGASFEKAAELYFIFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAE--SCNNRDYY 112
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
YLG+LP+LTG ESL++EG+TL++LIIH FPI+YEG ++W+S R+KV+ LLILVAD
Sbjct: 113 YLGELPFLTGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRVKVILLLILVADI 172
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
+VY L+L+ F +LP RIAPY+RVVFFILNIR+LRD+ F+LAGMLGTYLNV+AL LFL
Sbjct: 173 VVYILFLAD--FYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFL 230
Query: 243 LFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAY------------ 290
LFSSWLAYV FEDT QG FTS+GTTLYQMFVLFTTSNNPDVWIPAY
Sbjct: 231 LFSSWLAYVFFEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVL 290
Query: 291 -------------------NFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 331
+FKS+L KQV++ DR+R RTL KAF+LID N G LN++QC
Sbjct: 291 YVLLGVYFVTNLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGHLNEKQC 350
Query: 332 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 391
LFEELNKYRTLP IS ++F+ IF ELDDT DFKINLDEFADLC AI LRFQKED
Sbjct: 351 TLLFEELNKYRTLPKISGDDFKSIFSELDDTGDFKINLDEFADLCTAIGLRFQKEDSLPI 410
Query: 392 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV 451
FE P+ YHSP SEKL+ F+R F Y+I +L+VNLVAVI+ETTLDIQ +S Q+ WQ+V
Sbjct: 411 FEACPNFYHSPASEKLRGFVRGATFEYIIVFVLLVNLVAVIIETTLDIQNNSGQTFWQKV 470
Query: 452 EFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG 511
EF FGW+YV+EMALK+Y+YGFENYWRDGQNRFDF+VTWVIVIGET T +P+G TFLSNG
Sbjct: 471 EFTFGWLYVIEMALKVYTYGFENYWRDGQNRFDFVVTWVIVIGETATFVAPDGLTFLSNG 530
Query: 512 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIF 571
EWIRYLL+ARMLRLIRLLMHV++YR FVATF TLIPSL+PYLGTIFC+ C YCSLG+QIF
Sbjct: 531 EWIRYLLIARMLRLIRLLMHVERYRAFVATFFTLIPSLVPYLGTIFCILCFYCSLGLQIF 590
Query: 572 GGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 631
GGIVN GN L +TDLA +DYLLFNFNDYPNGMVTLFN+LVMGNWQVWMQSYKELTGTAW
Sbjct: 591 GGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTAW 650
Query: 632 TLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKT 691
T AYFVSFYLI+VL LLNL++AFVLEAF AE++LE+S +C + D ERRR VGTKT
Sbjct: 651 TYAYFVSFYLISVLWLLNLIVAFVLEAFQAEVDLEASARCVDGDDKEAKSERRRNVGTKT 710
Query: 692 RSQKVDVLLHHMLSAELQKSCD 713
RSQ+VD LLHHML +EL + +
Sbjct: 711 RSQRVDFLLHHMLRSELTECSN 732
>sp|Q75VR0|TPC1B_TOBAC Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B
PE=2 SV=1
Length = 735
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/742 (67%), Positives = 591/742 (79%), Gaps = 42/742 (5%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ L+ GE+S + R RRR G ++F RR DAI GS YQKAAALVDLAEDGIGLPE
Sbjct: 2 EEYLLPGESSNSCRT----RRRSG--SIFDRR-DAIAHGSAYQKAAALVDLAEDGIGLPE 54
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
EIL+ +SFE +A+ YF+F +FD++WSLNY AL+VLNF EKPLWC+K SC +R+YY
Sbjct: 55 EILEGASFEKAAELYFMFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAE--SCNNRDYY 112
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
YLG+LP+LTG ESL++EG+TL++LIIH FPI+YEG ++W+S RLKV+ LLILVAD
Sbjct: 113 YLGELPFLTGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRLKVILLLILVADI 172
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
+VY L P F +LP RIAPY+RVVFFILNIR+LRD+ F+LAGMLGTYLNV+AL LFL
Sbjct: 173 VVY--ILLPADFYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFL 230
Query: 243 LFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAY------------ 290
LFSSWLAYV FEDT QG FTS+GTTLYQMFVLFTTSNNPDVWIPAY
Sbjct: 231 LFSSWLAYVFFEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVL 290
Query: 291 -------------------NFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 331
+FKS+L KQV++ DR+R RTL KAF+LID N G LN++QC
Sbjct: 291 YVLLGVYFVTNLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGLLNEKQC 350
Query: 332 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 391
LFEELNKYRTLP IS ++F+ IF+ELDDT DFKINL+EFADLC+AI LRFQKED
Sbjct: 351 TLLFEELNKYRTLPKISGDDFKSIFNELDDTGDFKINLEEFADLCSAIGLRFQKEDSLPI 410
Query: 392 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV 451
FE P+ YHSP SEKL+ FIR F Y+I +L+VNLVAVI+ETTLDIQ +S Q+ WQ+V
Sbjct: 411 FEACPNFYHSPASEKLRGFIRGATFEYIIVFVLLVNLVAVIIETTLDIQNNSGQTFWQKV 470
Query: 452 EFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG 511
EF FGW+YV+EMALK+Y+YGFENYWRDGQNRFDF+VTWVIVIGET T +P+ TFLSNG
Sbjct: 471 EFTFGWLYVIEMALKVYTYGFENYWRDGQNRFDFIVTWVIVIGETTTFVAPDDLTFLSNG 530
Query: 512 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIF 571
EWIRYLL+ARMLRLIRLLMHV++YR FVATFLTLIPSLMPYLGTIFC+ C YCSLG+QIF
Sbjct: 531 EWIRYLLIARMLRLIRLLMHVERYRAFVATFLTLIPSLMPYLGTIFCILCFYCSLGLQIF 590
Query: 572 GGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 631
GGIVN GN L +TDLA +DYLLFNFNDYPNGMVTLFN+LVMGNWQVWMQSYKELTGT+W
Sbjct: 591 GGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTSW 650
Query: 632 TLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKT 691
T AYFVSFYLI+VL LLNL++AFVLEAF AEM+LE+S +C + D RERRR VGTKT
Sbjct: 651 TYAYFVSFYLISVLWLLNLIVAFVLEAFQAEMDLEASARCVDGDDKEAKRERRRNVGTKT 710
Query: 692 RSQKVDVLLHHMLSAELQKSCD 713
RSQ+VD LLHHML +EL + +
Sbjct: 711 RSQRVDFLLHHMLRSELTECSN 732
>sp|Q5QM84|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica
GN=TPC1 PE=1 SV=2
Length = 757
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/712 (61%), Positives = 539/712 (75%), Gaps = 40/712 (5%)
Query: 31 FRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLN 90
++RR+DA+ G+ YQKAAALVDLAEDG+G+PE++L+ + FE + +FYF++++ D++WSLN
Sbjct: 50 YQRRSDALAYGNRYQKAAALVDLAEDGVGIPEDVLNDTRFERAMRFYFVYLRLDWLWSLN 109
Query: 91 YFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHT 150
FALI+LNFLEKPLWC G ++C R+ Y+LGQLPYL+ ESL+YEG+TLVIL++
Sbjct: 110 LFALILLNFLEKPLWC--RGYSQHACDQRDLYFLGQLPYLSKTESLIYEGLTLVILVMDI 167
Query: 151 FFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFF 210
F+P++YEG +FWK+T +LKVL L IL D LV+ AF+ P R+APYIRV F
Sbjct: 168 FYPLSYEGLNLFWKNTINKLKVLLLFILACDILVF-------AFSPQPFRVAPYIRVAFL 220
Query: 211 ILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTL 270
I+NIR+LR L GM+GTYLNVLAL LLFLLF+SWLAYV FEDT QG VF+S+GTTL
Sbjct: 221 IMNIRELRMCAVTLVGMVGTYLNVLALSLLFLLFASWLAYVTFEDTPQGKTVFSSYGTTL 280
Query: 271 YQMFVLFTTSNNPDVWIPAY-------------------------------NFKSQLAKQ 299
YQMF+LFTTSNNPDVW+PAY +FK QLAKQ
Sbjct: 281 YQMFILFTTSNNPDVWVPAYKSSRWSSLFFIVYVLLGVYFLTNLILAVIYDSFKEQLAKQ 340
Query: 300 VSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDEL 359
VS+ D R+ L KAF +ID G+LNKEQC+ L +ELNKYR+LP SRE+FELIF EL
Sbjct: 341 VSQADCTRKSILEKAFGIIDATGQGYLNKEQCLSLLDELNKYRSLPKTSREDFELIFAEL 400
Query: 360 DDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYM 419
D + DFK+ +EFA LCN IA++FQKE PS E PS YHS E LK+F+RS F Y+
Sbjct: 401 DQSGDFKVTSEEFATLCNTIAIKFQKEPPPSYLEKYPSFYHSALCEWLKSFVRSPLFEYI 460
Query: 420 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 479
+ +L++NLVAVI+ETTLDI+ SS Q VWQEVEFVFGWIYV+EMALKI+S GF YW +G
Sbjct: 461 VIFVLLMNLVAVIIETTLDIENSSSQKVWQEVEFVFGWIYVIEMALKIFSLGFGAYWMEG 520
Query: 480 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 539
QN+FDF++TW I IGET+T A P+ +FLSNGEWIRYLLL RMLRL R+L+ V+++R FV
Sbjct: 521 QNKFDFVLTWTIFIGETLTFAFPSKLSFLSNGEWIRYLLLGRMLRLTRILLQVRRFRAFV 580
Query: 540 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 599
ATF TL+ SLMPYLG +FC CIYCSLG+QIFGGIV AGN LEETDL +DYLLFNFND
Sbjct: 581 ATFFTLMSSLMPYLGIVFCTLCIYCSLGLQIFGGIVYAGNPTLEETDLFSNDYLLFNFND 640
Query: 600 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
YP+GMVTLFNLLVMGNWQ WM+SY++LTG+ W+L YFVSFYLI+VLLLLNL++AFVLEAF
Sbjct: 641 YPSGMVTLFNLLVMGNWQAWMESYRQLTGSYWSLIYFVSFYLISVLLLLNLIVAFVLEAF 700
Query: 660 FAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHMLSAELQKS 711
FAEMELE + + +D E R RRR V +T+ VD+LLHHMLS EL S
Sbjct: 701 FAEMELEKDGEADIQDPTLEGRNRRRSVRVRTKGTMVDILLHHMLSNELDGS 752
>sp|Q6YLX9|TPC1_WHEAT Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1
PE=2 SV=1
Length = 742
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/745 (57%), Positives = 545/745 (73%), Gaps = 42/745 (5%)
Query: 1 MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGL 60
+ E+ G AS +R + +G +RRR+DA+ G YQKAAALVDLAEDG+G+
Sbjct: 9 ITEEAAERGLASSGSRRLSDGAGGQGSRK-YRRRSDALAYGDRYQKAAALVDLAEDGVGI 67
Query: 61 PEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDRE 120
PE++L+ + F + FYF++++ D++WSLN FALI+LNFLEKPLWC K + Y R+
Sbjct: 68 PEDVLNDTRFGRAMSFYFVYLRLDWLWSLNLFALILLNFLEKPLWCRKDALQAYD--QRD 125
Query: 121 YYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVA 180
Y+LGQLPY + ESL+YEG+TLVIL++ F P++YEG IFW+ST +LK++ L IL
Sbjct: 126 LYFLGQLPYFSKTESLIYEGLTLVILVMDIFCPLSYEGLNIFWRSTTNKLKIVLLFILAC 185
Query: 181 DFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLL 240
D LV+ AF+ P R+APYIRVVF I+ IR+LR LAG++GTYLNVLAL LL
Sbjct: 186 DILVF-------AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLL 238
Query: 241 FLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAY---------- 290
FLLF+SWLAYV FEDT QG +F+S+G TLYQMFVLFTTSNNPDVW+ AY
Sbjct: 239 FLLFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVHAYKIPRWYSLFF 298
Query: 291 ---------------------NFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKE 329
+FK Q AKQ+ ++D +R+ L KAF+LID N G+L++E
Sbjct: 299 IVYVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDSIRKNILQKAFDLIDTNNRGYLDRE 358
Query: 330 QCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVP 389
QCI L ELNKYR+LP SRE+FELIF ELD + DFK+ +EFADLCN IA++FQKE P
Sbjct: 359 QCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPP 418
Query: 390 SCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQ 449
S E P YHSP +LK+F+RS F Y+I +L++NLVAVI+ETTLDI+ SS Q WQ
Sbjct: 419 SYLEKFP-FYHSPLCGRLKSFVRSRMFEYIIVFVLLINLVAVIIETTLDIENSSSQETWQ 477
Query: 450 EVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS 509
EVEF GWIYV EMALKI+S GF YW +GQN+FDF++TW I IGET+T A P+ FLS
Sbjct: 478 EVEFFLGWIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLS 537
Query: 510 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQ 569
NGEWIRYLLL R+LRL R+L+ VQ++R FVATF TL+ SLMPYLG +FCV C+YCS+G+Q
Sbjct: 538 NGEWIRYLLLGRVLRLTRILLQVQRFRAFVATFFTLMSSLMPYLGIVFCVLCMYCSIGLQ 597
Query: 570 IFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGT 629
IFGGIV AGN LEETDL ++DYLLFNFNDYP+GMVTLFNLLVMGNWQVWM+SY +LTGT
Sbjct: 598 IFGGIVYAGNPTLEETDLFNNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGT 657
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGT 689
+W+L YFVSFYLI++LLLLNL++AFVLEAFFAEMELE E+ + ++ ++RR +
Sbjct: 658 SWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQNPTSGGIKKRRSMRV 717
Query: 690 KTRSQKVDVLLHHMLSAELQKSCDS 714
+++ VD+LLHHMLS EL S +S
Sbjct: 718 RSKGTMVDILLHHMLSNELDGSQNS 742
>sp|Q6S5H8|TPC1_HORVU Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2
SV=1
Length = 742
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/745 (57%), Positives = 543/745 (72%), Gaps = 42/745 (5%)
Query: 1 MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGL 60
+ E+ G AS +R + +G +RRR+DA+ G YQKAAALVDLAEDG+G+
Sbjct: 9 ITEEAAERGLASSGSRRLSDGGGGQGSRK-YRRRSDALAHGDRYQKAAALVDLAEDGVGI 67
Query: 61 PEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDRE 120
PE++L+ + F + FYF++++ D++WSLN FALI+LNFLEKPLWC K + ++C R+
Sbjct: 68 PEDVLNDTRFGRAMSFYFVYLRLDWLWSLNIFALILLNFLEKPLWCRKDAL--HACDQRD 125
Query: 121 YYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVA 180
Y+LGQLPY + ESL+YEG+TLVIL++ P++YEG IFW+ST +LK+L L IL
Sbjct: 126 MYFLGQLPYFSKTESLIYEGLTLVILVMEILCPLSYEGLNIFWRSTTNKLKILLLFILAC 185
Query: 181 DFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLL 240
D LV+ AF+ P R+APYIRVVF I+ IR+LR LAG++GTYLNVLAL LL
Sbjct: 186 DILVF-------AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLL 238
Query: 241 FLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAY---------- 290
FLLF+SWLAYV FEDT QG +F+S+G TLYQMFVLFTTSNNPDVW+PAY
Sbjct: 239 FLLFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVPAYKISRWYSLFF 298
Query: 291 ---------------------NFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKE 329
+FK Q AKQ+ ++D +R+ L KAF LID G+L++E
Sbjct: 299 IVYVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDAIRKNILQKAFELIDTNTRGYLDRE 358
Query: 330 QCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVP 389
QCI L ELNKYR+LP SRE+FELIF ELD + DFK+ +EFADLCN IA++FQKE P
Sbjct: 359 QCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPP 418
Query: 390 SCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQ 449
S E P YHSP +LK+F+RS F Y+I +L++NLVAVI+ETTLDI+ SS Q WQ
Sbjct: 419 SYLEKFP-FYHSPVCGRLKSFVRSRTFEYIIVFVLLINLVAVIIETTLDIENSSSQETWQ 477
Query: 450 EVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS 509
EVEF GWIYV EMALKI+S GF YW +GQN+FDF++TW I IGET+T A P+ FLS
Sbjct: 478 EVEFFLGWIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLS 537
Query: 510 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQ 569
NGEWIRYLLL R+LRL R+L+ VQ++R FVATF TL+ SLMPYLG +FC+ C+YCSLG+Q
Sbjct: 538 NGEWIRYLLLGRVLRLTRILLQVQRFRVFVATFFTLMSSLMPYLGIVFCILCMYCSLGLQ 597
Query: 570 IFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGT 629
IFGGIV AGN LEETDL +DYLLFNFNDYP+GMVTLFNLLVMGNWQVWM+SY +LTG+
Sbjct: 598 IFGGIVYAGNPTLEETDLFSNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGS 657
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGT 689
+W+L YFVSFYLI++LLLLNL++AFVLEAFFAEMELE E+ + + ++RR +
Sbjct: 658 SWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQSPTSGGIKKRRSMRV 717
Query: 690 KTRSQKVDVLLHHMLSAELQKSCDS 714
+++ VD+LLHHMLS EL S +S
Sbjct: 718 RSKGTMVDILLHHMLSNELDGSQNS 742
>sp|Q9WTN5|TPC1_RAT Two pore calcium channel protein 1 OS=Rattus norvegicus GN=Tpcn1
PE=1 SV=2
Length = 817
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 211/461 (45%), Gaps = 61/461 (13%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYN--------FKSQLAKQVSEMDRMRRRTLGKA 314
F + ++ +FVL TT+N PDV +P+Y+ F L+ ++ + + +
Sbjct: 264 FNTLENSIVNLFVLLTTANFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDT 323
Query: 315 FNLIDNYNVG--FLNKEQCI------------------KLFEELNKYRTLPNISREEFEL 354
FN I+ + L+K I + FE L ++ P +S E L
Sbjct: 324 FNDIEKHKFKSLLLHKRTAIQHAYHLLVSQRRPAGISYRQFEGLMRFYK-PRMSARERFL 382
Query: 355 IFDELDDTHDFKINLDEFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
F L+ ++ ++L +F D+ AL+++ K++ F+ LP F + + + S
Sbjct: 383 TFKALNQSNTPLLSLKDFYDIYEVAALQWKAKKNRQHWFDELPRTAFLIF-KGINILVNS 441
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
F Y + +++ VN V ++VET + + + VF IY +E+ +K+ G
Sbjct: 442 KAFQYFMYLVVAVNGVWILVETFMLKGGNFISKHVPWSYLVFLTIYGVELFMKVAGLGPV 501
Query: 474 NYWRDGQNRFDFLVTWVIVIG-ETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHV 532
Y G N FDF VT +G +TL N E ++++ R L+L+RL
Sbjct: 502 EYLSSGWNLFDFSVTAFAFLGLLALTL----------NMEPFYFIVVLRPLQLLRLFKLK 551
Query: 533 QQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIV--NAGNAKL-------- 582
++YR + T L+P + T+ + +G++ F G + N N+
Sbjct: 552 KRYRNVLDTMFELLPRMASLGLTLLTFYYSFAIVGMEFFSGRLSPNCCNSSTVADAYRFI 611
Query: 583 -----EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 637
+T + + Y L NF++ N VTLF L V+ NW + M+ T + W+ YF+
Sbjct: 612 NHTVGNKTKVEEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQT-SHWSRLYFM 670
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDG 678
+FY++T ++++ +++AF+LEAF M S K +E + D
Sbjct: 671 TFYIVT-MVVMTIIVAFILEAFVFRMNY--SRKSQESEVDS 708
>sp|Q9ULQ1|TPC1_HUMAN Two pore calcium channel protein 1 OS=Homo sapiens GN=TPCN1 PE=1
SV=3
Length = 816
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 207/460 (45%), Gaps = 59/460 (12%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYN--------FKSQLAKQVSEMDRMRRRTLGKA 314
F++ ++ +FVL TT+N PDV +P+Y+ F L+ ++ + + +
Sbjct: 263 FSTLENSIVSLFVLLTTANFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDT 322
Query: 315 FNLID--NYNVGFLNKEQCI------------------KLFEELNKYRTLPNISREEFEL 354
FN I+ + L+K I + FE L ++ P +S E L
Sbjct: 323 FNDIEKRKFKSLLLHKRTAIQHAYRLLISQRRPAGISYRQFEGLMRFYK-PRMSARERYL 381
Query: 355 IFDELDDTHDFKINLDEFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
F L+ + ++L +F D+ AL+++ K++ F+ LP F + + ++S
Sbjct: 382 TFKALNQNNTPLLSLKDFYDIYEVAALKWKAKKNREHWFDELPRTALLIF-KGINILVKS 440
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
F Y + +++ VN V ++VET + + VF IY +E+ LK+ G
Sbjct: 441 KAFQYFMYLVVAVNGVWILVETFMLKGGNFFSKHVPWSYLVFLTIYGVELFLKVAGLGPV 500
Query: 474 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQ 533
Y G N FDF VT A N E ++++ R L+L+RL +
Sbjct: 501 EYLSSGWNLFDFSVT---------VFAFLGLLALALNMEPFYFIVVLRPLQLLRLFKLKE 551
Query: 534 QYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIV--NAGNAKL--------- 582
+YR + T L+P + T+ + +G++ F GIV N N
Sbjct: 552 RYRNVLDTMFELLPRMASLGLTLLIFYYSFAIVGMEFFCGIVFPNCCNTSTVADAYRWRN 611
Query: 583 ----EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVS 638
T + + Y L NF++ N VTLF L V+ NW + M+ T + W+ YF++
Sbjct: 612 HTVGNRTVVEEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQT-SHWSRLYFMT 670
Query: 639 FYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDG 678
FY++T ++++ +++AF+LEAF M S K ++ + DG
Sbjct: 671 FYIVT-MVVMTIIVAFILEAFVFRMNY--SRKNQDSEVDG 707
>sp|Q8BWC0|TPC2_MOUSE Two pore calcium channel protein 2 OS=Mus musculus GN=Tpcn2 PE=1
SV=1
Length = 731
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 228/537 (42%), Gaps = 76/537 (14%)
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV---LALGLLFLLFSSWLAYVIFE 254
PLR+ +R F + N ++ TL + L +V LA+ L L + I E
Sbjct: 167 PLRMRRLLRPFFLLQNSSMMKKTLKCIRWSLPEMASVGLLLAIHLCLFTIIGMLLFTIGE 226
Query: 255 -DTVQGN---MVFTSFGTTLYQMFVLFTTSNNPDVWIPAYNFKSQLA------KQVSEMD 304
D Q F + L + VL TTSNNPDV IPAY A + +
Sbjct: 227 KDEAQDQERLAYFRNLPEALTSLLVLLTTSNNPDVMIPAYTQNRAFALFFIVFTLIGSLF 286
Query: 305 RMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFE---------ELNKYRTLP--------NI 347
M T +I N G+L K LF E+ R P +
Sbjct: 287 LMNLLT-----AIIYNQFRGYLMKSLQTSLFRRRLGARAAYEVLASRAGPAGTTPELVGV 341
Query: 348 SREEFELIFD--ELDDTHDFKIN------------LDEFADLCNAIALRFQKEDVPSCFE 393
+ E F + +L+ TH I DEF L + + KE
Sbjct: 342 NPETFLPVLQKTQLNKTHKQAIMQKVQSYEGRPMLADEFQKLFDEVDKGLAKE------R 395
Query: 394 NLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLD---IQESSLQSVWQE 450
L Y SPF + + F Y+ +++ + NL+++ V LD + V
Sbjct: 396 PLKPQYQSPFLQTAQFIFSHHYFDYLGNLVALGNLLSICVFLVLDSDLLPGERDDFVLGI 455
Query: 451 VEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLA---------S 501
++++F Y+LE+ K+++ G Y N FD L+T ++++ E TLA
Sbjct: 456 LDYIFILYYLLELLFKVFALGLPGYLSYHSNVFDGLLTIILLVSEICTLAVYRLPHSGWK 515
Query: 502 PNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC 561
P LS + R + + R +R++ +++ T L LIP+L + G +
Sbjct: 516 PEQYGPLSLWDMTRLMNTLIVFRFLRIIPNIKPMAEVANTILGLIPNLRAFGGILVVAYY 575
Query: 562 IYCSLGVQIFGG-IVNAGNAKLEETD-------LADDDYLLFNFNDYPNGMVTLFNLLVM 613
++ +G+ +F G IV GN+ L + Y NF+D+ ++TL+N++V+
Sbjct: 576 VFAMIGINLFRGVIVPPGNSSLVPDNNSAVCGSFEQLGYWPNNFDDFAAALITLWNVMVV 635
Query: 614 GNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEK 670
NWQV +++YK G W++ YFV ++L++ ++ +NL +A +LE F + + ++
Sbjct: 636 NNWQVILEAYKRYAG-PWSMVYFVLWWLVSSVIWINLFLALLLENFLHRWDPQGHKQ 691
>sp|Q9EQJ0|TPC1_MOUSE Two pore calcium channel protein 1 OS=Mus musculus GN=Tpcn1 PE=2
SV=1
Length = 817
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 209/460 (45%), Gaps = 63/460 (13%)
Query: 263 FTSFGTTLYQMFVLFTTSNNPDVWIPAYN--------FKSQLAKQVSEMDRMRRRTLGKA 314
F++ ++ +FVL TT+N PDV +P+Y+ F L+ ++ + + +
Sbjct: 264 FSTLENSIVNLFVLLTTANFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDT 323
Query: 315 FNLIDNYNVG--FLNKEQCI------------------KLFEELNKYRTLPNISREEFEL 354
FN I+ + L+K I + FE L ++ P +S E L
Sbjct: 324 FNDIEKHKFKSLLLHKRTAIQHAYGLLASQRRPAGISYRQFEGLMRFYK-PRMSARERFL 382
Query: 355 IFDELDDTHDFKINLDEFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
F L+ ++ ++L +F D+ AL+++ K + F+ LP F + + + S
Sbjct: 383 TFKALNQSNTPLLSLKDFYDIYEVAALQWKAKRNRQHWFDELPRTAFLIF-KGINILVNS 441
Query: 414 TKFGYMISIILIVNLVAVIVETTL--DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYG 471
F Y + +++ VN V ++VET + +S W + VF IY +E+ +K+ G
Sbjct: 442 KAFQYFMYLVVAVNGVWILVETFMLKGGNFTSKHVPWSYL--VFLTIYGVELFMKVAGLG 499
Query: 472 FENYWRDGQNRFDFLVTWVIVIG-ETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
Y G N FDF VT +G +TL N E ++++ R L+L+RL
Sbjct: 500 PVEYLSSGWNLFDFSVTAFAFLGLLALTL----------NMEPFYFIVVLRPLQLLRLFK 549
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIV--NAGNAKL------ 582
++YR + T L+P + T+ + +G++ F G + N N
Sbjct: 550 LKKRYRNVLDTMFELLPRMASLGLTLLTFYYSFAIVGMEFFNGRLTPNCCNTSTVADAYR 609
Query: 583 -------EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAY 635
+T + + Y L NF++ N VTLF L V+ NW + M+ T + W+ Y
Sbjct: 610 FINHTVGNKTKVEEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQT-SHWSRLY 668
Query: 636 FVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
F++FY++T ++++ +++AF+LEAF M + E D
Sbjct: 669 FMTFYIVT-MVVMTIIVAFILEAFVFRMNYSRKSQDSEVD 707
>sp|Q8NHX9|TPC2_HUMAN Two pore calcium channel protein 2 OS=Homo sapiens GN=TPCN2 PE=1
SV=2
Length = 752
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 232/534 (43%), Gaps = 75/534 (14%)
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTV 257
PLRI +R F + N ++ TL + L +V L + L + ++F
Sbjct: 183 PLRIRRLLRPFFLLQNSSMMKKTLKCIRWSLPEMASVGLLLAIHLCLFTMFGMLLFAGGK 242
Query: 258 QGN-------MVFTSFGTTLYQMFVLFTTSNNPDVWIPAYN------------------- 291
Q + F + +L + VL TT+NNPDV IPAY+
Sbjct: 243 QDDGQDRERLTYFQNLPESLTSLLVLLTTANNPDVMIPAYSKNRAYAIFFIVFTVIGSLF 302
Query: 292 ------------FKSQLAKQVSEMDRMRRRTLGKAFNLIDNY--NVGFLNKEQCIK---L 334
F+ L K + RR AF ++ + G + +K L
Sbjct: 303 LMNLLTAIIYSQFRGYLMKSLQTSLFRRRLGTRAAFEVLSSMVGEGGAFPQAVGVKPQNL 362
Query: 335 FEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFEN 394
+ L K + + + + +++ ++ +EF L N + KE P
Sbjct: 363 LQVLQKVQ----LDSSHKQAMMEKVRSYGSVLLSAEEFQKLFNELDRSVVKEHPPR---- 414
Query: 395 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQS---VWQEV 451
P Y SPF + + F Y+ ++I + NLV++ V LD + + +
Sbjct: 415 -PE-YQSPFLQSAQFLFGHYYFDYLGNLIALANLVSICVFLVLDADVLPAERDDFILGIL 472
Query: 452 EFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLA---------SP 502
VF Y+LEM LK+++ G Y N FD L+T V+++ E TLA P
Sbjct: 473 NCVFIVYYLLEMLLKVFALGLRGYLSYPSNVFDGLLTVVLLVLEISTLAVYRLPHPGWRP 532
Query: 503 NGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCI 562
LS + R L + + R +R++ ++ +T L L+ ++ + G + V +
Sbjct: 533 EMVGLLSLWDMTRMLNMLIVFRFLRIIPSMKLMAVVASTVLGLVQNMRAFGGILVVVYYV 592
Query: 563 YCSLGVQIFGGIVNA--GNAKLEETDLADD-------DYLLFNFNDYPNGMVTLFNLLVM 613
+ +G+ +F G++ A GN+ L + + +Y NF+D+ +VTL+NL+V+
Sbjct: 593 FAIIGINLFRGVIVALPGNSSLAPANGSAPCGSFEQLEYWANNFDDFAAALVTLWNLMVV 652
Query: 614 GNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELES 667
NWQV++ +Y+ +G W+ YFV ++L++ ++ +NL +A +LE F + + S
Sbjct: 653 NNWQVFLDAYRRYSG-PWSKIYFVLWWLVSSVIWVNLFLALILENFLHKWDPRS 705
>sp|A0JMD4|TPC2_DANRE Two pore calcium channel protein 2 OS=Danio rerio GN=tpcn2 PE=2
SV=1
Length = 774
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 135/615 (21%), Positives = 256/615 (41%), Gaps = 94/615 (15%)
Query: 139 EGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILV-ADFLVYGLYLSPIAFNFL 197
EGI +V L I +T +G I W+ +L LI++ A + + L +S +
Sbjct: 140 EGIEIVCLCIF-ILDVTAKGYLIGWEEFRMNKWLLAYLIVITASVIDWMLSISMLCDE-- 196
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIF---E 254
LR+ IR F + N ++ TL + L +V+ L L + + + +IF +
Sbjct: 197 NLRVRRLIRPFFLLQNSSLMKKTLKCIKRTLPEIASVILLLALHICLFTMIGMLIFAKSD 256
Query: 255 DTVQG---NMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYN-------------------- 291
D Q F + L + VL TT+NNPDV IPAY+
Sbjct: 257 DPKQNGEWQTYFRNLPKALSSLLVLLTTANNPDVMIPAYSLNRGYSIFFILFSVFGTYLL 316
Query: 292 -----------FKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQ-------CIK 333
F+ L V RR + AF ++ G + + +
Sbjct: 317 MNLMTAIIYNQFRGYLLMSVQTSIIRRRLGIRAAFEVLCCPGRGHTSTQAEGHVERVAVS 376
Query: 334 LFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFE 393
+F ++ + + + R+ I D I+ ++F L N + F KE P
Sbjct: 377 MFLKVMERVHMKSYCRQA---IVKAARRFPDGFISGEDFQRLFNELDKDFVKEHPPK--- 430
Query: 394 NLPSIYHSPFSEKLKAFIRSTKFGYMISI----ILIVNLVAVIVETTLDIQESSLQSVWQ 449
+S I+ Y IS+ + + N++ + L+ ++S+ + +
Sbjct: 431 -------PEYSSSGLQHIQYVYSHYYISVLGNAVALANVICICTVLVLNAEKSASEKNYF 483
Query: 450 EVEFV---FGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLA----- 500
+E + F Y++EM LKI ++G++ Y N FD FL ++ I I +
Sbjct: 484 YMEIINCIFILYYLIEMLLKIVAFGWKGYLSYRNNIFDGFLTVLLLAIQIVIFITFKIPY 543
Query: 501 ---SPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIF 557
P + ++ E IR + + + R +R++ ++ +T + L+ +L + G +
Sbjct: 544 VDVDPVPRHVMALWEMIRLVNMLIVFRFLRIIPEIKLMAVVASTIVDLVKNLRAFAGILL 603
Query: 558 CVQCIYCSLGVQIFGGIVN----------------AGNAKLEETDLADDDYLLFNFNDYP 601
V ++ LG+ +F G ++ G +E +Y NF+D+
Sbjct: 604 VVYYMFAVLGIWLFQGAISPPSNMSLVSNSSLENITGPYSMECGTFEQLEYWPNNFDDFA 663
Query: 602 NGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFA 661
+ ++ L+N++V+ NW V+ +Y T T W+L YFV ++L + ++ +NL +A +LE F
Sbjct: 664 SSLILLYNIMVVNNWHVFTDAYARYT-TDWSLVYFVVWWLTSSVMWVNLFVALILENFTY 722
Query: 662 EMELESSEKCEEEDK 676
+ + + E+ ++
Sbjct: 723 KWDRSNGLSVEDVER 737
>sp|O60840|CAC1F_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1F OS=Homo
sapiens GN=CACNA1F PE=1 SV=2
Length = 1977
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P ++ A + S F Y++ +++++N VA+ ++ Q + + VF
Sbjct: 1174 IPKNPHQYRVWATVNSAAFEYLMFLLILLNTVALAMQHYE--QTAPFNYAMDILNMVFTG 1231
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIR-- 515
++ +EM LKI ++ ++Y+ D N FD L+ ++ +T + G S+ + R
Sbjct: 1232 LFTIEMVLKIIAFKPKHYFTDAWNTFDALIVVGSIVDIAVTEVNNGGHLGESSEDSSRIS 1291
Query: 516 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFC-VQCIYCSLGVQIFG 572
+ L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1292 ITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIAMIFFIYAVIGMQMFG 1350
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY--------- 623
+ ++ + NF +P ++ LF WQ M +
Sbjct: 1351 KVALQDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEIMLASLPGNRCDPE 1401
Query: 624 ------KELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+E T G+ + +AYF+SF+++ L++NL +A +++ F
Sbjct: 1402 SDFGPGEEFTCGSNFAIAYFISFFMLCAFLIINLFVAVIMDNF 1444
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 23/262 (8%)
Query: 421 SIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQ 480
+++L+V L + + + Q L + + V ++ +EM LK+Y G Y
Sbjct: 534 AVLLLVFLNTLTIASEHHGQPVWLTQIQEYANKVLLCLFTVEMLLKLYGLGPSAYVSSFF 593
Query: 481 NRFDFLVTWVIVIGET---ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRG 537
NRFD V ++ T + P G I L R+LR+ ++ H
Sbjct: 594 NRFDCFVVCGGILETTLVEVGAMQPLG---------ISVLRCVRLLRIFKVTRHWASLSN 644
Query: 538 FVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNF 597
VA+ L + S+ L +F I+ LG+Q+FGG N + + F
Sbjct: 645 LVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRS----------TF 694
Query: 598 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 657
+ +P ++T+F +L +W V M G + V Y I + + N ++ V
Sbjct: 695 DTFPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVCIYFIILFICGNYILLNVFL 754
Query: 658 AFFAEMELESSEKCEEEDKDGE 679
A + L S + +DK GE
Sbjct: 755 AIAVD-NLASGDAGTAKDKGGE 775
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 52/309 (16%)
Query: 401 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 459
+P + + F +I + + N VA+ V +S + ++VE+VF I+
Sbjct: 79 NPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQVEYVFLVIF 138
Query: 460 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIG--ETITLASPN--GQTFLSNG 511
+E LKI +YG Y R+G N DF+ ++V+G + P G + G
Sbjct: 139 TVETVLKIVAYGLVLHPSAYIRNGWNLLDFI---IVVVGLFSVLLEQGPGRPGDAPHTGG 195
Query: 512 EW----IRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSL 566
+ ++ L R+LR +RL+ V + + + L+P L L +F + IY +
Sbjct: 196 KPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVI-IIYAII 254
Query: 567 GVQIFGG---------------------IVNAGNAK---LEETDL----ADDDYLLFNFN 598
G+++F G ++G+ + L +T+ + + NF+
Sbjct: 255 GLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRACTLNQTECRGRWPGPNGGITNFD 314
Query: 599 DYPNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFV 655
++ M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 315 NFFFAMLTVFQCVTMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVL 371
Query: 656 LEAFFAEME 664
F E E
Sbjct: 372 SGEFSKERE 380
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 120/310 (38%), Gaps = 53/310 (17%)
Query: 401 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYV 460
+P + I F +I + +I++ V++ E + S + ++ F I+
Sbjct: 858 NPLRKGCHTLIHHHVFTNLILVFIILSSVSLAAEDPIRAH-SFRNHILGYFDYAFTSIFT 916
Query: 461 LEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRY 516
+E+ LK+ +G ++ R N D LV V +I +F + I
Sbjct: 917 VEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLI------------SFGIHSSAISV 964
Query: 517 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV----QCIYCSLGVQIFG 572
+ + R+LR++R L + + +G + ++ +G I V Q ++ +GVQ+F
Sbjct: 965 VKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR-TIGNIMIVTTLLQFMFACIGVQLFK 1023
Query: 573 GIVNAGNAKLEETDLADDDYLL---------------------FNFNDYPNGMVTLFNLL 611
G + + T L FNF++ + M+ LF +
Sbjct: 1024 GKFYTCTDEAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTVS 1083
Query: 612 VMGNWQVWM----QSYKELTGTAWTLAYFVS-----FYLITVLLLLNLVIAFVLEAFFAE 662
W + +Y E G + +S + +I ++N+ + FV+ F A+
Sbjct: 1084 TFEGWPALLYKAIDAYAEDHGPIYNYRVEISVFFIVYIIIIAFFMMNIFVGFVIITFRAQ 1143
Query: 663 MELESSEKCE 672
E E + CE
Sbjct: 1144 GEQE-YQNCE 1152
>sp|Q25452|CAC1M_MUSDO Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1
Length = 1687
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 40/278 (14%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ S+ F Y I +++++N V + ++ Q + + +F ++ LE K+ +
Sbjct: 1105 FVTSSSFEYSIFVLIMINTVTLAMK--FYKQPEYYSEILDALNMIFTAVFSLEFIFKLAA 1162
Query: 470 YGFENYWRDGQNRFDFLVTWV----IVIGETIT----LASPNGQTF--LSNGEW---IRY 516
+ F+NY+ D N FDF++ IV E T LA+ +GQ+ G I +
Sbjct: 1163 FRFKNYFGDAWNTFDFIIVLGSFIDIVYSEIKTKEQALATCDGQSCNKAKGGSTLISINF 1222
Query: 517 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLG-TIFCVQCIYCSLGVQIFGGIV 575
L R++RL++LL + R + TF+ +L PY+ I + IY +G+Q+FG I+
Sbjct: 1223 FRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQVFGKIM 1281
Query: 576 NAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKEL--------- 626
LEE D + NF +P ++ LF WQ M +
Sbjct: 1282 ------LEEGTSIDRNN---NFQTFPQAVLVLFRSATGEAWQEIMMACSPRDDVKCDPES 1332
Query: 627 -----TGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
G++ YF+SFY++ L++NL +A +++ F
Sbjct: 1333 DAVNNCGSSIAFPYFISFYVLCSFLIINLFVAVIMDNF 1370
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 41/292 (14%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSL-QSVWQEVEFVFGWIYVLEMALKIYS 469
+ S F Y I + + N VA+ V T +S++ + +++E++F I+ E +KI +
Sbjct: 58 VDSKLFEYFILLTIFANCVALAVYTPYPSGDSNITNQMLEKIEYIFLVIFTSECVMKIIA 117
Query: 470 YGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRL 525
YGF +Y R+G N DF +++VIG T S + G ++ L R+LR
Sbjct: 118 YGFVLHTGSYLRNGWNFLDF---FIVVIGMISTALS----NLVKEGFDVKALRAFRVLRP 170
Query: 526 IRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNA----GNA 580
+RL+ V + + + L +IP L L +F + IY +G+++F G ++ N
Sbjct: 171 LRLVSGVPSLQVVLNSILKAMIPLLHIALLVLFVI-IIYAIIGLELFSGKLHKTCRHSNT 229
Query: 581 KLEETDLAD-----------------DDYL-----LFNFNDYPNGMVTLFNLLVMGNWQV 618
DL + DD++ + NF+++ M+T+F + + W
Sbjct: 230 GEYLNDLDELHACGVGFKCPSGYECFDDWVGPNDGITNFDNFGLSMLTVFQCITLEGWTD 289
Query: 619 WMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEK 670
+ S ++ G++W YFVS ++ ++NL++ VL F++ ++ +
Sbjct: 290 VLYSIQDAMGSSWEWIYFVSMVILGAFFVMNLILG-VLSGEFSKERTKAKNR 340
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 22/268 (8%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSY 470
++S F ++I IL+V L ++ T Q L + F ++ EM LK+YS
Sbjct: 431 VKSQAFYWLI--ILLVFLNTGVLATEHYRQPIWLDQFQEYTNIFFIALFTCEMILKMYSL 488
Query: 471 GFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
GF+ Y+ NRFD V VIG + + + G + L R+LR+ ++
Sbjct: 489 GFQGYFVSLFNRFDCFV----VIGSISEMVLTSSELMAPLG--VSVLRCVRLLRVFKVTK 542
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADD 590
+ VA+ L I S+ L +F I+ LG+Q+FGG T ++
Sbjct: 543 YWHSLSNLVASLLNSIQSIASLLLLLFLFIVIFGLLGMQVFGG---------RFTFKPEE 593
Query: 591 DYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLA-----YFVSFYLITVL 645
+ NF+ + ++T+F +L +W V M G ++ Y++ ++
Sbjct: 594 EKPRSNFDSFYQSLLTVFQILTGEDWNVVMYDGIRAYGGVFSFGIVACIYYIILFICGNY 653
Query: 646 LLLNLVIAFVLEAFFAEMELESSEKCEE 673
+LLN+ +A ++ L + EK +E
Sbjct: 654 ILLNVFLAIAVDNLADADSLSTIEKEDE 681
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 55/298 (18%)
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF- 472
+ FG I ++ + + E L ++S V + ++ F ++ +E+ LK+ SYGF
Sbjct: 790 SNFGNFILCCIMFSSAMLAAENPLK-ADASRNIVLNKFDYFFTAVFTIELVLKLISYGFV 848
Query: 473 ---ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
+ R N D LV V +I + N I + + R+LR++R L
Sbjct: 849 LHDGAFCRSAFNLLDLLVVCVSLI------------SIFFNSNAISVVKILRVLRVLRPL 896
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCI----YCSLGVQIFGG--IVNAGNAKLE 583
+ + +G +I ++ +G I V C+ + +GVQ+F G + +K+
Sbjct: 897 RAINRAKGLKHVVQCVIVAVKT-IGNIVLVTCLLQFMFAVIGVQLFKGKFFSCSDGSKVY 955
Query: 584 ETDLADDDYLL--------------------FNFNDYPNGMVTLFNLLVMGNWQ----VW 619
E+D YL F+F+D M+TLF + W V
Sbjct: 956 ESD-CHGTYLFYENGDINKPRLKEREWKNNKFHFDDVAKAMLTLFTVSTFEGWPTLLYVS 1014
Query: 620 MQSYKELTGTAWTLAYFV-----SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 672
+ S KE G + V + +I ++N+ + FV+ F E E E + CE
Sbjct: 1015 IDSNKENGGPIYNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQE-YKNCE 1071
>sp|Q9JIS7|CAC1F_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1F OS=Mus
musculus GN=Cacna1f PE=1 SV=1
Length = 1985
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P ++ A + S F Y++ +++++N VA+ ++ Q + + VF
Sbjct: 1179 IPKNPHQYRVWATVNSRAFEYLMFLLILLNTVALAMQHYE--QTAPFNYAMDILNMVFTG 1236
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIR-- 515
++ +EM LKI ++ ++Y+ D N FD L+ V+ +T + G S+ + R
Sbjct: 1237 LFTIEMVLKIIAFKPKHYFADAWNTFDALIVVGSVVDIAVTEVNNGGHLGESSEDTSRIS 1296
Query: 516 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFC-VQCIYCSLGVQIFG 572
+ L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1297 ITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIAMIFFIYAVIGMQMFG 1355
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY--------- 623
+ ++ + NF +P ++ LF WQ M +
Sbjct: 1356 LVALQDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEIMLASLPGNRCDPE 1406
Query: 624 ------KELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+E T G+++ + YF+SF+++ L++NL +A +++ F
Sbjct: 1407 SDFGPGEEFTCGSSFAIVYFISFFMLCAFLIINLFVAVIMDNF 1449
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 52/309 (16%)
Query: 401 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 459
+P + + F +I + + N VA+ V +S + ++VE+VF I+
Sbjct: 79 NPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQVEYVFLVIF 138
Query: 460 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIG--ETITLASPN--GQTFLSNG 511
+E LKI +YG Y R+G N DF+ ++V+G + P G + G
Sbjct: 139 TVETVLKIVAYGLVLHPSAYIRNGWNLLDFI---IVVVGLFSVLLEQGPGRPGDAPHTGG 195
Query: 512 EW----IRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSL 566
+ ++ L R+LR +RL+ V V + + L+P L L +F + IY +
Sbjct: 196 KPGGFDVKALRAFRVLRPLRLVSGVPSLHIVVNSIMKALVPLLHIALLVLFVI-IIYAII 254
Query: 567 GVQIFGG---------------------IVNAGNAK---LEETDL----ADDDYLLFNFN 598
G+++F G ++G+ + L T+ + + NF+
Sbjct: 255 GLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRSCTLNHTECRGRWPGPNGGITNFD 314
Query: 599 DYPNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFV 655
++ M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 315 NFFFAMLTVFQCITMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVL 371
Query: 656 LEAFFAEME 664
F E E
Sbjct: 372 SGEFSKERE 380
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 32/271 (11%)
Query: 428 LVAVIVETTLDIQESSLQSVW--QEVEF---VFGWIYVLEMALKIYSYGFENYWRDGQNR 482
L+ V + T E Q +W Q E+ V ++ +EM LK+Y G Y NR
Sbjct: 536 LLLVFLNTLTIASEHHGQPLWLTQTQEYANKVLLCLFTVEMLLKLYGLGPSVYVASFFNR 595
Query: 483 FDFLVTWVIVIGET---ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 539
FD V ++ T + P G I L R+LR+ ++ H V
Sbjct: 596 FDCFVVCGGILETTLVEVGAMQPLG---------ISVLRCVRLLRIFKVTRHWASLSNLV 646
Query: 540 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 599
A+ L + S+ L +F I+ LG+Q+FGG N + + F+
Sbjct: 647 ASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRS----------TFDT 696
Query: 600 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW-----TLAYFVSFYLITVLLLLNLVIAF 654
+P ++T+F +L +W V M G + YF+ ++ +LLN+ +A
Sbjct: 697 FPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAI 756
Query: 655 VLEAFFAEMELESSEKCEEEDKDGEPRERRR 685
++ + + +K E+ +G P + +
Sbjct: 757 AVDNLASGDAGTAKDKGREKSSEGNPPKENK 787
Score = 37.4 bits (85), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 123/312 (39%), Gaps = 57/312 (18%)
Query: 401 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYV 460
+P + I F +I + +I++ V++ E + S + ++ F I+
Sbjct: 863 NPLRKACHTLIHHHIFTSLILVFIILSSVSLAAEDPIRAH-SFRNHILGYFDYAFTSIFT 921
Query: 461 LEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRY 516
+E+ LK+ +G ++ R N D LV V +I +F + I
Sbjct: 922 VEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLI------------SFGIHSSAISV 969
Query: 517 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV----QCIYCSLGVQIFG 572
+ + R+LR++R L + + +G + ++ +G I V Q ++ +GVQ+F
Sbjct: 970 VKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR-TIGNIMIVTTLLQFMFACIGVQLFK 1028
Query: 573 G----IVNAGNAKLEETDLA-----DDDYLL------------FNFNDYPNGMVTLFNLL 611
G + L+E+ + D D FNF++ + M+ LF +
Sbjct: 1029 GKFYSCTDEAKHTLKESKGSFLIYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTVS 1088
Query: 612 VMGNWQVWMQSYKELTGTAWTLAYFVSFYL-----------ITVLLLLNLVIAFVLEAFF 660
W + YK + A ++++ I ++N+ + FV+ F
Sbjct: 1089 TFEGWPALL--YKAIDANAEDEGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVIITFR 1146
Query: 661 AEMELESSEKCE 672
A+ E E + CE
Sbjct: 1147 AQGEQE-YQNCE 1157
>sp|O57483|CAC1S_LITCT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Lithobates catesbeiana PE=2 SV=1
Length = 1688
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
++H K + ++S F +++ II+++N VI+ T Q SL V
Sbjct: 415 LWHRLLRRKSRDLVKSRFFYWLVIIIILLN--TVIIATEHHHQPDSLTKAQDIANEVLLA 472
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIG--ETITLASPNGQTFLSNGEWIR 515
++ +EM +KIY+ GF++Y+ NRFD ++V+ G E + +AS + + I
Sbjct: 473 LFTMEMIVKIYALGFQSYFMSLFNRFD---SFVVCTGLLEVMLVASD-----IMSPLGIS 524
Query: 516 YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIV 575
L R+LR+ ++ + VA+ L + S+ L +F I+ LG+Q+FGG
Sbjct: 525 VLRCIRLLRIFKITRYWTSLNNLVASLLNSVRSIASLLLLLFLFMIIFALLGMQMFGG-- 582
Query: 576 NAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAW 631
+ D D + F+ +P ++T+F +L +W M +Y T +
Sbjct: 583 --------KFDFEDLEVRRSTFDTFPQALITVFQILTGEDWTAVMYNGIMAYGGPTYSGM 634
Query: 632 TLA-YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTK 690
++ YF+ ++ +LLN+ +A ++ L S++K + E ER+R+ +
Sbjct: 635 SVCIYFIILFVCGNYILLNVFLAIAVDNLAEAENLTSAQKAKAE-------ERKRKKLAR 687
Query: 691 TRSQKVD 697
K +
Sbjct: 688 ANPDKTE 694
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P K+ + S+ F Y++ ++ +N +++ ++ E S S V F
Sbjct: 1100 IPKNPHQYKIWYVVTSSYFEYLMFFLITLNTISLGMQHYGQTAEFSYMSDILNVAFT--G 1157
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL-----------ASPNGQT 506
I+ +EM LK+ ++ + Y+ D N FDFL IVIG I + A+P +
Sbjct: 1158 IFTVEMFLKLAAFKAKGYFGDPWNVFDFL----IVIGSVIDVILSEIDTPGIPATPGAEE 1213
Query: 507 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCS 565
S+ I + L R+LRL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1214 --SSRISITFFRLFRVLRLVKLLSRGEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAV 1270
Query: 566 LGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSY 623
+G+Q+FG I + NF +P ++ LF WQ + SY
Sbjct: 1271 IGMQVFGKIALVDGTHINRNS---------NFQTFPQAVLLLFRCATGEAWQEILLACSY 1321
Query: 624 KELT--------------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+L GT++ YF+SFY++ L++NL +A +++ F
Sbjct: 1322 GKLCDPMSDFQPGEEYTCGTSFAYFYFISFYMLCAFLIINLFVAVIMDNF 1371
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 51/314 (16%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 458
+PF + + F +I + + N VA+ + + ++ S SV ++VE++F +I
Sbjct: 37 QNPFRKFCINIVEWKPFEMIILLTIFANCVALAIFLPMPEDDTNSTNSVLEKVEYIFLFI 96
Query: 459 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIV-------IGETITLASPNGQTF 507
+ +E LKI +YGF + Y R+G N DF + V V I + L +P
Sbjct: 97 FTIESFLKIVAYGFILHTDAYLRNGWNILDFTIVSVGVFSVLLEQISKLQGLPAPGK--- 153
Query: 508 LSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSL 566
S+G ++ L R+LR +RL+ V + + + + +IP L L +F + IY +
Sbjct: 154 -SSGFNVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMIPLLHIALLVLFMI-IIYAIV 211
Query: 567 GVQIFGGIVNAGNAKLEETDLA---DDDYL-----------------------------L 594
G+++F G ++ ++TD+ D++ +
Sbjct: 212 GLELFSGKMHK-TCYFKDTDITATVDNEKPAPCSSTGQGRQCSINGSECRGWWPGPNNGI 270
Query: 595 FNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAF 654
+F+++ M+T++ + M W + + G W YFVS L+ +LNLV+
Sbjct: 271 THFDNFGFAMLTVYQCITMEGWTEVLYWVNDAIGNEWPWIYFVSLILLGSFFVLNLVLGV 330
Query: 655 VLEAFFAEMELESS 668
+ F E E S
Sbjct: 331 LSGEFTKEREKAKS 344
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 130/314 (41%), Gaps = 60/314 (19%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSY 470
I +T F I + ++++ +++ E + ES V +++ VF I+ E+ LK+ +Y
Sbjct: 794 INATTFTNFILLFILLSSISLAAEDPIQ-PESFRNKVLSKLDIVFTVIFTTEIVLKMTAY 852
Query: 471 GF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLI 526
G ++ R+ N D V V +I I ++ I + + R+LR++
Sbjct: 853 GAFLHKGSFCRNSFNILDLSVVGVSLISMGIESSA------------ISVVKILRVLRVL 900
Query: 527 RLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV----QCIYCSLGVQIFGG--------- 573
R L + + +G L ++ +G I V Q ++ +GVQ+F G
Sbjct: 901 RPLRAINRAKGLKHVVQCLFVAIKT-IGNIVLVTTLLQFMFSCIGVQLFKGKFYSCTDTT 959
Query: 574 ------------IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM- 620
+ GN E + F+F++ +GM++LF + W +
Sbjct: 960 KITADECRGYFFVAKDGNPAHMEAVPRVWSHSDFHFDNVLSGMMSLFTISTFEGWPQLLY 1019
Query: 621 ---QSYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 672
S+ E G + +F+ + ++ ++N+ + FV+ F E+ E
Sbjct: 1020 RAIDSHAEDMGPIYNYRIEIAVFFIVYIILIAFFMMNIFVGFVIVTF--------QEQGE 1071
Query: 673 EEDKDGEPRERRRR 686
+E KD E + +R+
Sbjct: 1072 QEYKDCELDKNQRQ 1085
>sp|P27732|CAC1D_RAT Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus
norvegicus GN=Cacna1d PE=1 SV=2
Length = 2203
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1248 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1305
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLA-SPNGQTFLSNGEWIRY 516
++ +EM LK+ ++ + Y+ D N FD L IVIG I +A S + SN I +
Sbjct: 1306 VFTVEMVLKVIAFKPKGYFSDAWNTFDSL----IVIGSIIDVALSEADNSEESNRISITF 1361
Query: 517 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFGGIV 575
L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG +
Sbjct: 1362 FRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYAVIGMQMFGKVA 1420
Query: 576 NAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM--------------- 620
N ++ NF +P ++ LF WQ M
Sbjct: 1421 MRDNNQI---------NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPDSDY 1471
Query: 621 QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1472 NPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1511
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 40/304 (13%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 458
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 112 NNPIRRACISIVDWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 171
Query: 459 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 509
+ +E LKI + G R+G N DF++ V VI E +T + G + S
Sbjct: 172 FTVETFLKIIASGLLLHPNASVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 231
Query: 510 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 568
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 232 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 290
Query: 569 QIFGGIVN----------------------------AGNAKLEETDLADDDYLLFNFNDY 600
++F G ++ A N + + + NF+++
Sbjct: 291 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCAANGTECRSGWVGPNGGITNFDNF 350
Query: 601 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 660
M+T+F + M W + + G W YFVS ++ +LNLV+ + F
Sbjct: 351 AFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFS 410
Query: 661 AEME 664
E E
Sbjct: 411 KERE 414
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 31/270 (11%)
Query: 409 AFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIY 468
A ++S F +++ +++ +N + + E Q L + V ++ EM +K+Y
Sbjct: 577 AAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQIQDIANKVLLALFTCEMLVKMY 634
Query: 469 SYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASPNGQTFLSNGEWIRYLLLARMLR 524
S G + Y+ NRFD V I ETI L SP G + R+LR
Sbjct: 635 SLGLQAYFVSLFNRFDCFVV-CGGITETILVELELMSPLG---------VSVFRCVRLLR 684
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
+ ++ H VA+ L + S+ L +F I+ LG+Q+FGG N + +
Sbjct: 685 IFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKR 744
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YFVSF 639
+ F+++P ++T+F +L +W M +Y + + + YF+
Sbjct: 745 S----------TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIIL 794
Query: 640 YLITVLLLLNLVIAFVLEAFFAEMELESSE 669
++ +LL L +A ++ L +++
Sbjct: 795 FICGNYILLKLFLAIAVDNLADAESLNTAQ 824
>sp|Q99246|CAC1D_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mus
musculus GN=Cacna1d PE=1 SV=3
Length = 2179
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 41/291 (14%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1209 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1266
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN------------GQ 505
++ +EM LK+ ++ + Y+ D N FD L+ +I ++ A P+ G
Sbjct: 1267 VFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPSESETIPLPTATPGN 1326
Query: 506 TFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYC 564
+ SN I + L R++RL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1327 SEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYA 1385
Query: 565 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---- 620
+G+Q+FG + N ++ NF +P ++ LF WQ M
Sbjct: 1386 VIGMQMFGKVAMRDNNQI---------NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACL 1436
Query: 621 -----------QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1437 PGKLCDPDSDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1487
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 458
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 112 NNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 171
Query: 459 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 509
+ +E LKI +YG Y R+G N DF++ V VI E +T + G + S
Sbjct: 172 FTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 231
Query: 510 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 568
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 232 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 290
Query: 569 QIFGGIVN-----AGNAKLEETDLADDDYL-----------------------LFNFNDY 600
++F G ++ A + + E D A + + NF+++
Sbjct: 291 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNF 350
Query: 601 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 660
M+T+F + M W + + G W YFVS ++ +LNLV+ + F
Sbjct: 351 AFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFS 410
Query: 661 AEME 664
E E
Sbjct: 411 KERE 414
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 31/270 (11%)
Query: 409 AFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIY 468
A ++S F +++ +++ +N + + E Q L + V ++ EM +K+Y
Sbjct: 538 AAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQIQDIANKVLLALFTCEMLVKMY 595
Query: 469 SYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASPNGQTFLSNGEWIRYLLLARMLR 524
S G + Y+ NRFD V I ETI L SP G + R+LR
Sbjct: 596 SLGLQAYFVSLFNRFDCFVV-CGGITETILVELELMSPLG---------VSVFRCVRLLR 645
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
+ ++ H VA+ L + S+ L +F I+ LG+Q+FGG N + +
Sbjct: 646 IFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKR 705
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YFVSF 639
+ F+++P ++T+F +L +W M +Y + + + YF+
Sbjct: 706 S----------TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIIL 755
Query: 640 YLITVLLLLNLVIAFVLEAFFAEMELESSE 669
++ +LLN+ +A ++ L +++
Sbjct: 756 FICGNYILLNVFLAIAVDNLADAESLNTAQ 785
>sp|P07293|CAC1S_RABIT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1
Length = 1873
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 354 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 1066 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYVVTS 1117
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 1118 SYFEYLMFALIMLNTICLGMQHYH--QSEEMNHISDILNVAFTIIFTLEMILKLLAFKAR 1175
Query: 474 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 515
Y+ D N FDFL IVIG I + TFL++ E R
Sbjct: 1176 GYFGDPWNVFDFL----IVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARIS 1231
Query: 516 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 572
+ L R++RLI+LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1232 SAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 1290
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKELT--- 627
I ++ + NF +P ++ LF WQ + SY +L
Sbjct: 1291 KIALVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE 1341
Query: 628 -----------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 1342 SDYAPGEEYTCGTNFAYYYFISFYMLCAFLIINLFVAVIMDNF 1384
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 130/311 (41%), Gaps = 43/311 (13%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWI 458
+P + + + F +I + + N VA+ V + + +SL +++E+ F +
Sbjct: 37 QNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNSLNLGLEKLEYFFLTV 96
Query: 459 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIV---IGETITLASPNGQTFLSNG 511
+ +E A+KI +YGF + Y R G N DF++ ++ V I E + + N S G
Sbjct: 97 FSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFTAILEQVNVIQSNTAPMSSKG 156
Query: 512 EW--IRYLLLARMLRLIRLLMHVQQYRGFV-ATFLTLIPSLMPYLGTIFCVQCIYCSLGV 568
++ L R+LR +RL+ V + + + F ++P L +F V IY +G+
Sbjct: 157 AGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMV-IIYAIIGL 215
Query: 569 QIFGG----------------IVNAGNAKLEETDLA---------------DDDYLLFNF 597
++F G + N + T ++ + +F
Sbjct: 216 ELFKGKMHKTCYYIGTDIVATVENEKPSPCARTGSGRPCTINGSECRGGWPGPNHGITHF 275
Query: 598 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 657
+++ M+T++ + M W + + G W YFV+ L+ +LNLV+ +
Sbjct: 276 DNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSG 335
Query: 658 AFFAEMELESS 668
F E E S
Sbjct: 336 EFTKEREKAKS 346
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVL 461
F K ++S F +++ +I+ +N +++ E + + LQ + V ++ +
Sbjct: 421 FRWKCHDLVKSRVFYWLVILIVALNTLSIASEHHNQPLWLTHLQDIANRVLLS---LFTI 477
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM LK+Y G Y+ NRFD V ++ + L T L I L R
Sbjct: 478 EMLLKMYGLGLRQYFMSIFNRFDCFVVCSGIL--ELLLVESGAMTPLG----ISVLRCIR 531
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LRL ++ + VA+ L I S+ L +F I+ LG+Q+FGG
Sbjct: 532 LLRLFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIIIFALLGMQLFGG-------- 583
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-QSYKELTGTAW----TLAYF 636
D D + NF+++P ++++F +L +W M G ++ YF
Sbjct: 584 --RYDFEDTEVRRSNFDNFPQALISVFQVLTGEDWNSVMYNGIMAYGGPSYPGVLVCIYF 641
Query: 637 VSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQK 695
+ ++ +LLN+ +A ++ L S++K + E++ + R+ R + KT +K
Sbjct: 642 IILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEER--KRRKMSRGLPDKTEEEK 698
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 53/275 (19%)
Query: 342 RTLPNISREEFELIFDELDDTHD-------FKINLDEFADLCNAIALRFQKEDVPSC-FE 393
R LP+ + EE ++ +L+ K+ +DEF N + + D P E
Sbjct: 688 RGLPDKTEEEKSVMAKKLEQKPKGEGIPTTAKLKVDEFESNVNEVKDPYPSADFPGDDEE 747
Query: 394 NLPSIYHSPFSEKLKAF-------------------------------IRSTKFGYMISI 422
+ P I SP L + +T F I +
Sbjct: 748 DEPEIPVSPRPRPLAELQLKEKAVPIPEASSFFIFSPTNKVRVLCHRIVNATWFTNFILL 807
Query: 423 ILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRD 478
++++ A+ E + ES + + F ++ +E+ LK+ +YG ++ R+
Sbjct: 808 FILLSSAALAAEDPIR-AESVRNQILGYFDIAFTSVFTVEIVLKMTTYGAFLHKGSFCRN 866
Query: 479 GQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGF 538
N D LV V +I ++ L S S ++ L + R+LR +R + + +
Sbjct: 867 YFNILDLLVVAVSLI--SMGLES-------STISVVKILRVLRVLRPLRAINRAKGLKHV 917
Query: 539 VATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG 573
V I ++ + +Q ++ +GVQ+F G
Sbjct: 918 VQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKG 952
>sp|Q01668|CAC1D_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1D OS=Homo
sapiens GN=CACNA1D PE=1 SV=2
Length = 2161
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1189 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1246
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN------------GQ 505
++ +EM LK+ ++ + Y+ D N FD L+ +I ++ A P G
Sbjct: 1247 VFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESENVPVPTATPGN 1306
Query: 506 TFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYC 564
+ SN I + L R++RL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1307 SEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYA 1365
Query: 565 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---- 620
+G+Q+FG + N ++ NF +P ++ LF WQ M
Sbjct: 1366 VIGMQMFGKVAMRDNNQI---------NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACL 1416
Query: 621 -----------QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1417 PGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1467
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 458
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 112 NNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 171
Query: 459 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 509
+ +E LKI +YG Y R+G N DF++ V VI E +T + G + S
Sbjct: 172 FTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 231
Query: 510 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 568
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 232 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 290
Query: 569 QIFGGIVN-----AGNAKLEETDLADDDYL-----------------------LFNFNDY 600
++F G ++ A + + E D A + + NF+++
Sbjct: 291 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNF 350
Query: 601 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 660
M+T+F + M W + + G YFVS + +LNLV+ + F
Sbjct: 351 AFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFS 410
Query: 661 AEME 664
E E
Sbjct: 411 KERE 414
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 31/270 (11%)
Query: 409 AFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIY 468
A ++S F +++ +++ +N + + E Q L + V ++ EM +K+Y
Sbjct: 518 AAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQIQDIANKVLLALFTCEMLVKMY 575
Query: 469 SYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASPNGQTFLSNGEWIRYLLLARMLR 524
S G + Y+ NRFD V I ETI + SP G I R+LR
Sbjct: 576 SLGLQAYFVSLFNRFDCFVV-CGGITETILVELEIMSPLG---------ISVFRCVRLLR 625
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
+ ++ H VA+ L + S+ L +F I+ LG+Q+FGG N + +
Sbjct: 626 IFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKR 685
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YFVSF 639
+ F+++P ++T+F +L +W M +Y + + + YF+
Sbjct: 686 S----------TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIIL 735
Query: 640 YLITVLLLLNLVIAFVLEAFFAEMELESSE 669
++ +LLN+ +A ++ L +++
Sbjct: 736 FICGNYILLNVFLAIAVDNLADAESLNTAQ 765
>sp|Q9P0X4|CAC1I_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1I OS=Homo
sapiens GN=CACNA1I PE=1 SV=1
Length = 2223
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 25/268 (9%)
Query: 420 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 479
I+ I+ +N+V + +E Q +SL++ + ++F ++VLE LK+ ++G +++D
Sbjct: 1493 ITFIICLNVVTMSLEHY--NQPTSLETALKYCNYMFTTVFVLEAVLKLVAFGLRRFFKDR 1550
Query: 480 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 539
N+ D + + V+G T+ N + N IR + + R+ R+++LL R +
Sbjct: 1551 WNQLDLAIVLLSVMGITLEEIEINAALPI-NPTIIRIMRVLRIARVLKLLKMATGMRALL 1609
Query: 540 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 599
T + +P + + IY +LGV++FG +V E F +
Sbjct: 1610 DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRH------ATFEN 1663
Query: 600 YPNGMVTLFNLLVMGNWQVWMQ-SYKELTGTAWTL---------AYFVSFYLITVLLLLN 649
+ +TLF + NW M+ + ++ T + YFVSF L +L+N
Sbjct: 1664 FGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVLIN 1723
Query: 650 LVIAFVLEAFFAEMELESSEKCEEEDKD 677
+V+A +++ L+ S K +ED +
Sbjct: 1724 VVVAVLMK------HLDDSNKEAQEDAE 1745
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 39/293 (13%)
Query: 406 KLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMAL 465
KL+ + S F I + ++VN V++ +E +E L ++ + VF ++ LEM L
Sbjct: 632 KLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEE--LTNILEICNVVFTSMFALEMIL 689
Query: 466 KIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR-MLR 524
K+ ++G +Y R+ N FD ++ + + I + G + L +R L L R M
Sbjct: 690 KLAAFGLFDYLRNPYNIFDSIIVIISIW--EIVGQADGGLSVLRTFRLLRVLKLVRFMPA 747
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
L R L+ + + VATF L LM + IF I+ LG+ IFG +
Sbjct: 748 LRRQLVVLMKTMDNVATFCML---LMLF---IF----IFSILGMHIFGCKFSL------R 791
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTA-WTLAYFVSFYLIT 643
TD D NF+ +VT+F +L +W V + Y + T+ W YFV+
Sbjct: 792 TDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVL--YNGMASTSPWASLYFVALMTFG 849
Query: 644 VLLLLNLVIAFVLEAFFAEM--------ELESSEKCEEEDK-------DGEPR 681
+L NL++A ++E F AE E +SS EE DK G+P+
Sbjct: 850 NYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNIEEFDKLQEGLDSSGDPK 902
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 408 KAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFGWIYVLEMALK 466
+ I F Y++ + +N + + +E I+ S + ++ V ++F I+V EM LK
Sbjct: 1164 QTIIAHKLFDYVVLAFIFLNCITIALERP-QIEAGSTERIFLTVSNYIFTAIFVGEMTLK 1222
Query: 467 IYS----YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
+ S +G + Y R N D + +V +I ++LAS G L L + R+
Sbjct: 1223 VVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSLASAGGAKILG------VLRVLRL 1276
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGVQIFGGI---- 574
LR +R L + + G TLI SL P +G I + C I+ LGVQ+F G
Sbjct: 1277 LRTLRPLRVISRAPGLKLVVETLISSLKP-IGNIVLICCAFFIIFGILGVQLFKGKFYHC 1335
Query: 575 --VNAGNAKLEETDLADD---DYLLFNFNDYPNGMVTLFNLLVMGNW---------QVWM 620
V+ N +A + + +NF++ +++LF L W V +
Sbjct: 1336 LGVDTRNITNRSDCMAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAV 1395
Query: 621 QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
W L YF+SF LI +LN+ + V+E F
Sbjct: 1396 DQQPVTNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENF 1434
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo
sapiens GN=CACNA1S PE=1 SV=4
Length = 1873
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 354 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 1066 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYIVTS 1117
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 1118 SYFEYLMFALIMLNTICLGMQHY--NQSEQMNHISDILNVAFTIIFTLEMILKLMAFKAR 1175
Query: 474 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 515
Y+ D N FDFL IVIG I + TFL++ E R
Sbjct: 1176 GYFGDPWNVFDFL----IVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARIS 1231
Query: 516 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 572
+ L R++RLI+LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1232 SAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 1290
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKELT--- 627
I ++ + NF +P ++ LF WQ + SY +L
Sbjct: 1291 KIALVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE 1341
Query: 628 -----------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 1342 SDYAPGEEYTCGTNFAYYYFISFYMLCAFLVINLFVAVIMDNF 1384
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 129/299 (43%), Gaps = 29/299 (9%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVL 461
F K ++S F +++ +I+ +N +++ E + + LQ + V ++
Sbjct: 421 FRWKCHDIVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTRLQDIANRVLLS---LFTT 477
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM +K+Y G Y+ NRFD V ++ I L T L I L R
Sbjct: 478 EMLMKMYGLGLRQYFMSIFNRFDCFVVCSGIL--EILLVESGAMTPLG----ISVLRCIR 531
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LR+ ++ + VA+ L I S+ L +F I+ LG+Q+FGG
Sbjct: 532 LLRIFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIVIFALLGMQLFGG-------- 583
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-QSYKELTGTAW----TLAYF 636
D D + NF+++P ++++F +L +W M G ++ YF
Sbjct: 584 --RYDFEDTEVRRSNFDNFPQALISVFQVLTGEDWTSMMYNGIMAYGGPSYPGMLVCIYF 641
Query: 637 VSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQK 695
+ ++ +LLN+ +A ++ L S++K + E+K + R+ G +S++
Sbjct: 642 IILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEEK----KRRKMSKGLPDKSEE 696
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 137/331 (41%), Gaps = 48/331 (14%)
Query: 385 KEDVPSCFENLPS-----IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL-D 438
K+ VP P +P + + + F +I + + N VA+ V + +
Sbjct: 17 KKPVPEILPRPPRALFCLTLENPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPE 76
Query: 439 IQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---I 491
+SL +++E+ F ++ +E A+KI +YGF + Y R G N DF + ++
Sbjct: 77 DDNNSLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFTIVFLGVFT 136
Query: 492 VIGETITLASPNGQTFLSNGEW--IRYLLLARMLRLIRLLMHVQQYRGFV-ATFLTLIPS 548
VI E + + + S G ++ L R+LR +RL+ V + + + F ++P
Sbjct: 137 VILEQVNVIQSHTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPL 196
Query: 549 LMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN--------AKLEETDLAD----------- 589
L +F V IY +G+++F G ++ A +E + +
Sbjct: 197 FHIALLVLFMV-IIYAIIGLELFKGKMHKTCYFIGTDIVATVENEEPSPCARTGSGRRCT 255
Query: 590 ------------DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 637
++ + +F+++ M+T++ + M W + + G W YFV
Sbjct: 256 INGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWPWIYFV 315
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESS 668
+ L+ +LNLV+ + F E E S
Sbjct: 316 TLILLGSFFILNLVLGVLSGEFTKEREKAKS 346
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 129/302 (42%), Gaps = 38/302 (12%)
Query: 293 KSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISR--- 349
+S + Q ++ + +RR + K L D K K E+ K +P ++
Sbjct: 668 ESLTSAQKAKAEEKKRRKMSKG--LPDKSEE---EKSTMAKKLEQKPKGEGIPTTAKLKI 722
Query: 350 EEFELIFDELDDTH---DFKINLDE------FADLCNAIA-LRFQKEDVPSCFENLPSIY 399
+EFE +E+ D + DF + +E + +A L+ +++ VP S +
Sbjct: 723 DEFESNVNEVKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVP--IPEASSFF 780
Query: 400 HSPFSEKLKAF----IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVF 455
+ K++ + +T F I + ++++ A+ E + +S + + + F
Sbjct: 781 IFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIR-ADSMRNQILKHFDIGF 839
Query: 456 GWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG 511
++ +E+ LK+ +YG ++ R+ N D LV V +I ++ L S S
Sbjct: 840 TSVFTVEIVLKMTTYGAFLHKGSFCRNYFNMLDLLVVAVSLI--SMGLES-------SAI 890
Query: 512 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIF 571
++ L + R+LR +R + + + V I ++ + +Q ++ +GVQ+F
Sbjct: 891 SVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVTTLLQFMFACIGVQLF 950
Query: 572 GG 573
G
Sbjct: 951 KG 952
>sp|Q9Z0Y8|CAC1I_RAT Voltage-dependent T-type calcium channel subunit alpha-1I OS=Rattus
norvegicus GN=Cacna1i PE=2 SV=3
Length = 2201
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 126/268 (47%), Gaps = 25/268 (9%)
Query: 420 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 479
I+ I+ +N+V + +E Q +SL++ + ++F ++VLE LK+ ++G +++D
Sbjct: 1452 ITFIICLNVVTMSLEHY--NQPTSLETALKYCNYMFTTVFVLEAVLKLVAFGLRRFFKDR 1509
Query: 480 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 539
N+ D + + V+G T+ N + N IR + + R+ R+++LL R +
Sbjct: 1510 WNQLDLAIVLLSVMGITLEEIEINAALPI-NPTIIRIMRVLRIARVLKLLKMATGMRALL 1568
Query: 540 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 599
T + +P + + IY +LGV++FG +V + + + F +
Sbjct: 1569 DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLV------CNDENPCEGMSRHATFEN 1622
Query: 600 YPNGMVTLFNLLVMGNWQVWMQ-SYKELTGTAWTL---------AYFVSFYLITVLLLLN 649
+ +TLF + NW M+ + ++ T + YFVSF L +L+N
Sbjct: 1623 FGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVLIN 1682
Query: 650 LVIAFVLEAFFAEMELESSEKCEEEDKD 677
+V+A +++ L+ S K +ED +
Sbjct: 1683 VVVAVLMK------HLDDSNKEAQEDAE 1704
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 405 EKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMA 464
EKL+ + S F I + ++VN V++ +E +E L ++ + VF ++ LEM
Sbjct: 589 EKLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEE--LTNILEICNVVFTSMFALEMI 646
Query: 465 LKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR-ML 523
LK+ ++G +Y R+ N FD ++ + + I + G + L +R L L R M
Sbjct: 647 LKLAAFGLFDYLRNPYNIFDSIIVIISIW--EIVGQADGGLSVLRTFRLLRVLKLVRFMP 704
Query: 524 RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLE 583
L R L+ + + VATF L LM + IF I+ LG+ IFG +
Sbjct: 705 ALRRQLVVLMKTMDNVATFCML---LMLF---IF----IFSILGMHIFGCKFSL------ 748
Query: 584 ETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLIT 643
TD D NF+ +VT+F +L +W V + + T T W YFV+
Sbjct: 749 RTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAST-TPWASLYFVALMTFG 807
Query: 644 VLLLLNLVIAFVLEAFFAEM--------ELESSEKCEEEDK 676
+L NL++A ++E F AE E +SS EE DK
Sbjct: 808 NYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNLEEFDK 848
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 47/350 (13%)
Query: 344 LPNISREEFELIFDELDDTHDFKINLDEFA-DLCNAI--ALRFQKEDVPSCFENLPSIYH 400
+PNI+++ +F ++DD D + +E LC + + K D E+
Sbjct: 1057 MPNIAKD----VFTKMDDCRDRGEDEEEIDYTLCFRVRKMIDVYKPDWCEVREDWSVYLF 1112
Query: 401 SP---FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFG 456
SP F + I F Y++ + +N + + +E I+ S + ++ V ++F
Sbjct: 1113 SPENKFRILCQTIIAHKLFDYVVLAFIFLNCITIALERP-QIEAGSTERIFLTVSNYIFT 1171
Query: 457 WIYVLEMALKIYS----YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGE 512
I+V EM LK+ S +G + Y R N D + +V +I +++AS G L
Sbjct: 1172 AIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILG--- 1228
Query: 513 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGV 568
L + R+LR +R L + + G TLI SL P +G I + C I+ LGV
Sbjct: 1229 ---VLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKP-IGNIVLICCAFFIIFGILGV 1284
Query: 569 QIFGGI------VNAGNAKLEETDLADDDYL----LFNFNDYPNGMVTLFNLLVMGNW-- 616
Q+F G V+ N +D +Y +NF++ +++LF L W
Sbjct: 1285 QLFKGKFYHCLGVDTRNIT-NRSDCVAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVN 1343
Query: 617 -------QVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
V + W L YF+SF LI +LN+ + V+E F
Sbjct: 1344 IMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENF 1393
>sp|Q02789|CAC1S_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus
musculus GN=Cacna1s PE=1 SV=2
Length = 1880
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 354 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 1066 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYVVTS 1117
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 1118 SYFEYLMFALIMLNTICLGMQHY--NQSEQMNHISDILNVAFTIIFTLEMVLKLIAFKPR 1175
Query: 474 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 515
Y+ D N FDFL IVIG I + TFL++ E R
Sbjct: 1176 AYFGDPWNVFDFL----IVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARIS 1231
Query: 516 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 572
+ L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1232 SAFFRLFRVMRLVKLLNRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 1290
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKELT--- 627
I ++ + NF +P ++ LF WQ + SY +L
Sbjct: 1291 KIAMVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE 1341
Query: 628 -----------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 1342 SDYAPGEEHTCGTNFAYYYFISFYMLCAFLIINLFVAVIMDNF 1384
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 135/331 (40%), Gaps = 48/331 (14%)
Query: 385 KEDVPSCFENLPS-----IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL-D 438
K+ VP P +P + + + F +I + + N VA+ V + +
Sbjct: 17 KKPVPEILPRPPRALFCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPE 76
Query: 439 IQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---I 491
++L +++E+ F ++ +E A+KI +YGF + Y R G N DF++ ++
Sbjct: 77 DDNNTLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFT 136
Query: 492 VIGETITLASPNGQTFLSNGEW--IRYLLLARMLRLIRLLMHVQQYRGFV-ATFLTLIPS 548
VI E + + N S G ++ L R+LR +RL+ V + + + F ++P
Sbjct: 137 VILEQVNIIQTNTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPL 196
Query: 549 LMPYLGTIFCVQCIYCSLGVQIFGG----------------IVNAGNAKLEETDLA---- 588
L +F V IY +G+++F G + N + T
Sbjct: 197 FHIALLVLFMV-IIYAIIGLELFKGKMHKTCYFIGTDIVATVENEKPSPCARTGSGRPCT 255
Query: 589 -----------DDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 637
++ + +F+++ M+T++ + M W + + G W YFV
Sbjct: 256 INGSECRGGWPGPNHGITHFDNFGFSMLTVYQCISMEGWTDVLYWVNDAIGNEWPWIYFV 315
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESS 668
+ L+ +LNLV+ + F E E S
Sbjct: 316 TLILLGSFFILNLVLGVLSGEFTKEREKAKS 346
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 32/301 (10%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVL 461
F K ++S F +++ +I+ +N +++ E + + LQ V V ++ +
Sbjct: 421 FRWKCHDLVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTHLQDVANRVLLT---LFTI 477
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM +K+Y G Y+ NRFD V ++ I L + L I L R
Sbjct: 478 EMLMKMYGLGLRQYFMSIFNRFDCFVVCSGIL--EILLVESGAMSPLG----ISVLRCIR 531
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LRL ++ + VA+ L I S+ L +F I+ LG+Q+FGG
Sbjct: 532 LLRLFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIIIFALLGMQLFGG-------- 583
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YF 636
D D + NF+++P ++++F +L +W M +Y T + YF
Sbjct: 584 --RYDFEDTEVRRSNFDNFPQALISVFQVLTGEDWNSVMYNGIMAYGGPTYPGVLVCIYF 641
Query: 637 VSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKV 696
+ ++ +LLN+ +A ++ L S++K + E ER+RR +K K
Sbjct: 642 IILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAE-------ERKRRKMSKGLPDKS 694
Query: 697 D 697
+
Sbjct: 695 E 695
Score = 37.4 bits (85), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 158/404 (39%), Gaps = 84/404 (20%)
Query: 342 RTLPNISREEFELIFDELDDTHD-------FKINLDEFADLCNAIALRFQKEDVPSC-FE 393
+ LP+ S EE + +L+ K+ +DEF N + + D P E
Sbjct: 688 KGLPDKSEEERATVTKKLEQKSKGEGIPTTAKLKIDEFESNVNEVKDPYPSADFPGDDEE 747
Query: 394 NLPSIYHSPFSEKLKAF-------------------------------IRSTKFGYMISI 422
+ P I SP L + +T F I +
Sbjct: 748 DEPEIPVSPRPRPLAELQLKEKAVPIPEASSFFIFSPTNKIRVLCHRIVNATWFTNFILL 807
Query: 423 ILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRD 478
++++ A+ E + +S + + ++VF ++ +E+ LK+ +YG ++ R+
Sbjct: 808 FILLSSAALAAEDPIR-ADSMRNQILEYFDYVFTAVFTVEIVLKMTTYGAFLHKGSFCRN 866
Query: 479 GQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGF 538
N D LV V +I ++ L S S ++ L + R+LR +R + + +
Sbjct: 867 YFNILDLLVVAVSLI--SMGLES-------SAISVVKILRVLRVLRPLRAINRAKGLKHV 917
Query: 539 VATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN--AKLEETDL-------AD 589
V I ++ + +Q ++ +GVQ+F G + N +K+ E + D
Sbjct: 918 VQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFYSCNDLSKMTEEECRGYYYIYKD 977
Query: 590 DD------------YLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWT- 632
D + F+F++ + M++LF + W + S +E TG +
Sbjct: 978 GDPTQIELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAIDSNEEDTGPVYNN 1037
Query: 633 ----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 672
+F+ + ++ ++N+ + FV+ F + E E + CE
Sbjct: 1038 RVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETE-YKNCE 1080
>sp|Q99244|CAC1D_MESAU Voltage-dependent L-type calcium channel subunit alpha-1D
OS=Mesocricetus auratus GN=CACNA1D PE=2 SV=2
Length = 1610
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 398 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 457
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1187 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1244
Query: 458 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN------------GQ 505
++ +EM LK+ ++ + Y+ D N FD L+ +I ++ A P G
Sbjct: 1245 VFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESESLPLPTATPGN 1304
Query: 506 TFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYC 564
+ SN I + L R++RL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1305 SEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYA 1363
Query: 565 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---- 620
+G+Q+FG K+ D NF +P ++ LF WQ M
Sbjct: 1364 VIGMQMFG--------KVAMRDNNQI-NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACL 1414
Query: 621 -----------QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1415 PGKLCDPDSDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1465
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 134/326 (41%), Gaps = 50/326 (15%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 458
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 111 NNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 170
Query: 459 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 509
+ +E LKI +YG Y R+G N DF++ V VI E +T + G + S
Sbjct: 171 FTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 230
Query: 510 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 568
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 231 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 289
Query: 569 QIFGGIVNAGNAKLEETDLADDDYL----------------------------LFNFNDY 600
++F G ++ + +A++D + NF+++
Sbjct: 290 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCAVNGTECRSGWVGPNGGITNFDNF 349
Query: 601 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 660
M+T+F + M W + + G YFVS + +LNLV+ + F
Sbjct: 350 AFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFS 409
Query: 661 AEME----------LESSEKCEEEDK 676
E E L +E+ EE+ K
Sbjct: 410 KEREKAKARGDFQKLRENEQLEEDLK 435
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 31/270 (11%)
Query: 409 AFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIY 468
A ++S F +++ +++ +N + + E Q L + V ++ EM +K+Y
Sbjct: 517 AAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQIQDIANKVLLALFTCEMLVKMY 574
Query: 469 SYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASPNGQTFLSNGEWIRYLLLARMLR 524
S G + Y+ NRFD V I ETI L SP G + R+LR
Sbjct: 575 SLGLQAYFVSLFNRFDCFVV-CGGITETILVELELMSPLG---------VSVFRCVRLLR 624
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
+ ++ H VA+ L + S+ L +F I+ LG+Q+FGG N + +
Sbjct: 625 IFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKR 684
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YFVSF 639
+ F+++P ++T+F +L +W M +Y + + + YF+
Sbjct: 685 S----------TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIIL 734
Query: 640 YLITVLLLLNLVIAFVLEAFFAEMELESSE 669
++ +LLN+ +A ++ L +++
Sbjct: 735 FICGNYILLNVFLAIAVDNLADAESLNTAQ 764
>sp|Q9UQD0|SCN8A_HUMAN Sodium channel protein type 8 subunit alpha OS=Homo sapiens GN=SCN8A
PE=1 SV=1
Length = 1980
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F +I +++ +N+V ++VET D Q ++++ + VF + E LK+++
Sbjct: 1518 FVTQQAFDIVIMMLICLNMVTMMVET--DTQSKQMENILYWINLVFVIFFTCECVLKMFA 1575
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1576 LR-HYYFTIGWNIFDFVVVILSIVG--MFLADIIEKYFVS-PTLFRVIRLARIGRILRLI 1631
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V I+ G+ F + + +
Sbjct: 1632 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV---------KHEAGI 1682
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------KELTGTAWT------- 632
DD +FNF + N M+ LF + W + KE G+ +
Sbjct: 1683 DD--MFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS 1740
Query: 633 --LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ +FVS+ +I+ L+++N+ IA +LE F E ES++ E+D
Sbjct: 1741 VGIFFFVSYIIISFLIVVNMYIAIILENFSVATE-ESADPLSEDD 1784
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 36/250 (14%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YGF ++ + DFL+ V ++ +
Sbjct: 1224 QRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVS---LI 1280
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L + +R L R LR +R L + R V + IPS+M L
Sbjct: 1281 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1337
Query: 560 QCIYCSLGVQIFGGI--------------VNAGNAKLEETDLADDD-------YLLFNFN 598
I+ +GV +F G + N K E L + + + NF+
Sbjct: 1338 WLIFSIMGVNLFAGKYHYCFNETSEIRFEIEDVNNKTECEKLMEGNNTEIRWKNVKINFD 1397
Query: 599 DYPNGMVTLFNLLVMGNWQVWM---------QSYKELTGTAWTLAYFVSFYLITVLLLLN 649
+ G + L + W M + + YFV F + LN
Sbjct: 1398 NVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVIFIIFGSFFTLN 1457
Query: 650 LVIAFVLEAF 659
L I +++ F
Sbjct: 1458 LFIGVIIDNF 1467
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 392 FENLPSIY-HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE 450
F P++Y SPF+ IR +I + + ++ I+ + + S+ +
Sbjct: 106 FSATPALYILSPFN-----LIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKN 160
Query: 451 VEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQT 506
VE+ F IY E +KI + GF + RD N DF V + I E + L
Sbjct: 161 VEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLG------ 214
Query: 507 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 566
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++ +
Sbjct: 215 ---NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALI 268
Query: 567 GVQIFGG 573
G+Q+F G
Sbjct: 269 GLQLFMG 275
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 454 VFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGE 512
VF I+ EM LK+ + Y+++G N FD F+V+ ++ ++LA G + L +
Sbjct: 791 VFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM---ELSLADVEGLSVLRSFR 847
Query: 513 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFG 572
+R LA+ + +L+ + LTL+ +++ + I+ +G+Q+FG
Sbjct: 848 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG 898
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWT 632
K+ + D + ++ +D+ + + +F +L G W M E+ G A
Sbjct: 899 KSYKECVCKINQ----DCELPRWHMHDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQAMC 953
Query: 633 LAYFVSFYLI 642
L F+ +I
Sbjct: 954 LIVFMMVMVI 963
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1591 VVVILSIVGMFLADIIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1648
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +FS S AYV E + F +FG ++ +F + T++
Sbjct: 1649 PALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWD 1708
Query: 284 DVWIPAYN 291
+ +P N
Sbjct: 1709 GLLLPILN 1716
>sp|O88420|SCN8A_RAT Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F +I +++ +N+V ++VET D Q ++++ + VF + E LK+++
Sbjct: 1516 FVTQQAFDIVIMMLICLNMVTMMVET--DTQSKQMENILYWINLVFVIFFTCECVLKMFA 1573
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1574 LR-HYYFTIGWNIFDFVVVILSIVG--MFLADIIEKYFVS-PTLFRVIRLARIGRILRLI 1629
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V I+ G+ F + + +
Sbjct: 1630 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV---------KHEAGI 1680
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------KELTGTAWT------- 632
DD +FNF + N M+ LF + W + KE G+ +
Sbjct: 1681 DD--MFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS 1738
Query: 633 --LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ +FVS+ +I+ L+++N+ IA +LE F E ES++ E+D
Sbjct: 1739 VGIFFFVSYIIISFLIVVNMYIAIILENFSVATE-ESADPLSEDD 1782
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YGF ++ + DFL+ V ++ +
Sbjct: 1222 QRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVS---LI 1278
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L I+ L R LR +R L + R V + IPS+M L
Sbjct: 1279 ANALGYSELGA---IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1335
Query: 560 QCIYCSLGVQIFGG-----------------IVNAGN--AKLEETDLADDDY--LLFNFN 598
I+ +GV +F G IVN KL E + + + + NF+
Sbjct: 1336 WLIFSIMGVNLFAGKYHYCFNETSEIRFEIDIVNNKTDCEKLMEGNSTEIRWKNVKINFD 1395
Query: 599 DYPNGMVTLFNLLVMGNWQVWM---------QSYKELTGTAWTLAYFVSFYLITVLLLLN 649
+ G + L + W M + G + YFV F + LN
Sbjct: 1396 NVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLN 1455
Query: 650 LVIAFVLEAF 659
L I +++ F
Sbjct: 1456 LFIGVIIDNF 1465
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 392 FENLPSIY-HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE 450
F P++Y SPF+ IR +I + + ++ I+ + + S+ +
Sbjct: 106 FSATPALYILSPFN-----LIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKN 160
Query: 451 VEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQT 506
VE+ F IY E +KI + GF + RD N DF V + + E + L
Sbjct: 161 VEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLG------ 214
Query: 507 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 566
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++ +
Sbjct: 215 ---NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALI 268
Query: 567 GVQIFGG 573
G+Q+F G
Sbjct: 269 GLQLFMG 275
Score = 37.4 bits (85), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 454 VFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGE 512
VF I+ EM LK+ + Y+++G N FD F+V+ ++ ++LA G + L +
Sbjct: 789 VFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM---ELSLADVEGLSVLRSFR 845
Query: 513 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFG 572
+R LA+ + +L+ + LTL+ +++ + I+ +G+Q+FG
Sbjct: 846 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG 896
Query: 573 GIVNAGNAKL-EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 631
K+ +E L ++ ND+ + + +F +L G W M E+ G A
Sbjct: 897 KSYKECVCKINQECKLPR-----WHMNDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQAM 950
Query: 632 TLAYFVSFYLI 642
L F+ +I
Sbjct: 951 CLIVFMMVMVI 961
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1589 VVVILSIVGMFLADIIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1646
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +FS S AYV E + F +FG ++ +F + T++
Sbjct: 1647 PALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWD 1706
Query: 284 DVWIPAYN 291
+ +P N
Sbjct: 1707 GLLLPILN 1714
>sp|Q61290|CAC1E_MOUSE Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus
musculus GN=Cacna1e PE=1 SV=1
Length = 2272
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 40/286 (13%)
Query: 395 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVE--TTLDIQESSLQSVWQEVE 452
+P H+ F ++ F+ S F Y I ++ +N V ++++ T E +L+ +
Sbjct: 1463 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYTAPCTYELALKYL----N 1517
Query: 453 FVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGE 512
F ++ LE LK+ ++GF NY+RD N FDF + VIG + + + ++G
Sbjct: 1518 IAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDF----ITVIGSITEIILTDSKLVNTSGF 1573
Query: 513 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIF 571
+ +L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1574 NMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF 1632
Query: 572 GGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----------- 620
GN KL+E + NF + ++ LF WQ M
Sbjct: 1633 ------GNIKLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEP 1683
Query: 621 -------QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
Q+ E GT YFVSF L+LNL +A +++ F
Sbjct: 1684 DTTAPSGQNESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1729
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM+LK+Y G Y+ N FDF VT V I E + G +F I L R
Sbjct: 523 EMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSIFEVVWAIFRPGTSF-----GISVLRALR 576
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LR+ ++ + R V + ++ + S++ L +F ++ LG+Q+FGG N
Sbjct: 577 LLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFN----- 631
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLAYFV 637
+D NF+ +P ++T+F +L +W M +S ++ W+ YF+
Sbjct: 632 ------FNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSAIYFI 685
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEE 674
L LLN+ +A ++ EL E+ EEE
Sbjct: 686 VLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEE 722
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 408 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 466
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 84 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 143
Query: 467 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 144 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRALRAVRV 195
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 575
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 196 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMN 255
Query: 576 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 619
N+G A E D + + F++ ++T+F + M W
Sbjct: 256 NSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 315
Query: 620 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 316 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 360
>sp|Q9WTU3|SCN8A_MOUSE Sodium channel protein type 8 subunit alpha OS=Mus musculus GN=Scn8a
PE=1 SV=1
Length = 1978
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F +I +++ +N+V ++VET D Q ++++ + VF + E LK+++
Sbjct: 1516 FVTQQAFDIVIMMLICLNMVTMMVET--DTQSKQMENILYWINLVFVIFFTCECVLKMFA 1573
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1574 LR-HYYFTIGWNIFDFVVVILSIVG--MFLADIIEKYFVS-PTLFRVIRLARIGRILRLI 1629
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V I+ G+ F + + +
Sbjct: 1630 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV---------KHEAGI 1680
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------KELTGTAWT------- 632
DD +FNF + N M+ LF + W + KE G+ +
Sbjct: 1681 DD--MFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS 1738
Query: 633 --LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ +FVS+ +I+ L+++N+ IA +LE F E ES++ E+D
Sbjct: 1739 VGIFFFVSYIIISFLIVVNMYIAIILENFSVATE-ESADPLSEDD 1782
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 36/250 (14%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YGF ++ + DFL+ V ++ +
Sbjct: 1222 QRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVS---LI 1278
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L I+ L R LR +R L + R V + IPS+M L
Sbjct: 1279 ANALGYSELGA---IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1335
Query: 560 QCIYCSLGVQIFGGI--------------VNAGNAKLEETDLADDD-------YLLFNFN 598
I+ +GV +F G ++ N K + L + + + NF+
Sbjct: 1336 WLIFSIMGVNLFAGKYHYCFNETSEIRFEIDEVNNKTDCEKLMEGNNTEIRWKNVKINFD 1395
Query: 599 DYPNGMVTLFNLLVMGNWQVWM---------QSYKELTGTAWTLAYFVSFYLITVLLLLN 649
+ G + L + W M + G + YFV F + LN
Sbjct: 1396 NVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLN 1455
Query: 650 LVIAFVLEAF 659
L I +++ F
Sbjct: 1456 LFIGVIIDNF 1465
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 392 FENLPSIY-HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE 450
F P++Y SPF+ IR +I + + ++ I+ + + S+ +
Sbjct: 106 FSATPALYILSPFN-----LIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKN 160
Query: 451 VEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQT 506
VE+ F IY E +KI + GF + RD N DF V + + E + L
Sbjct: 161 VEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLG------ 214
Query: 507 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 566
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++ +
Sbjct: 215 ---NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALI 268
Query: 567 GVQIFGG 573
G+Q+F G
Sbjct: 269 GLQLFMG 275
Score = 36.2 bits (82), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 454 VFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGE 512
VF I+ EM LK+ + Y+++G N FD F+V+ ++ + LA G + L +
Sbjct: 789 VFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM---ELGLADVEGLSVLRSFR 845
Query: 513 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFG 572
+R LA+ + +L+ + LTL+ +++ + I+ +G+Q+FG
Sbjct: 846 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG 896
Query: 573 GIVNAGNAKL-EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 631
K+ +E L ++ ND+ + + +F +L G W M E+ G A
Sbjct: 897 KSYKECVCKISQECKLPR-----WHMNDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQAM 950
Query: 632 TLAYFVSFYLI 642
L F+ +I
Sbjct: 951 CLIVFMMVMVI 961
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 172 VLCLLILVADFL---VYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGML 228
V+ +L +V FL + ++SP F + R+A R++ I + +R LF L L
Sbjct: 1589 VVVILSIVGMFLADIIEKYFVSPTLFRVI--RLARIGRILRLIKGAKGIRTLLFALMMSL 1646
Query: 229 GTYLNV-LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNP 283
N+ L L L+ +FS S AYV E + F +FG ++ +F + T++
Sbjct: 1647 PALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWD 1706
Query: 284 DVWIPAYN 291
+ +P N
Sbjct: 1707 GLLLPILN 1714
>sp|Q9R053|SCNBA_MOUSE Sodium channel protein type 11 subunit alpha OS=Mus musculus
GN=Scn11a PE=1 SV=2
Length = 1765
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 34/286 (11%)
Query: 406 KLKAFI----RSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVL 461
K +AF+ S F +I +++ N++ ++ E+ + Q + ++ ++ + VF I+ +
Sbjct: 1335 KCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAES--EGQPNEVKKIFDILNIVFVVIFTV 1392
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
E +K+++ ++Y+ +G N FD +V V+ I T+ N F R + LAR
Sbjct: 1393 ECLIKVFALR-QHYFTNGWNLFDCVVV-VLSIISTLVSGLENSNVFPPT--LFRIVRLAR 1448
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+ R++RL+ + R + + +PSL +F V IY G+ F +K
Sbjct: 1449 IGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNWF--------SK 1500
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWT--------- 632
++ DD +FNF+ + M+ LF + W + E + +
Sbjct: 1501 VKRGSGIDD---IFNFDTFSGSMLCLFQITTSAGWDALLNPMLESKASCNSSSQESCQQP 1557
Query: 633 ---LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ YFVS+ +I+ L+++N+ IA +LE F E ES + E+D
Sbjct: 1558 QIAIVYFVSYIIISFLIVVNMYIAVILENFNTATE-ESEDPLGEDD 1602
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 143/324 (44%), Gaps = 55/324 (16%)
Query: 395 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 454
L +I PF+E I+I +IVN V + +E ++SL+ + + +V
Sbjct: 568 LQTIMTDPFTE------------LAITICIIVNTVFLAMEH--HNMDNSLKDILKIGNWV 613
Query: 455 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 514
F I++ EM LKI + +Y+R G N FD +V ++ + + + +FL++ +
Sbjct: 614 FTGIFIAEMCLKIIALDPYHYFRHGWNIFDSIVA-LVSLADVLFHKLSKNLSFLASLRVL 672
Query: 515 RYLLLAR----MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQI 570
R LA+ + LI+++ H G + LT++ +F I+ +G+++
Sbjct: 673 RVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIV---------VF----IFSVVGMRL 719
Query: 571 FGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNW--QVWMQSYKELTG 628
FG N + + + ++ D+ + + +F +L G W +W + +E+ G
Sbjct: 720 FGAKFN------KTCSTSPESLRRWHMGDFYHSFLVVFRILC-GEWIENMW-ECMQEMEG 771
Query: 629 TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVG 688
+ + FV ++ L++LNL IA +L +F E+KDG P R+
Sbjct: 772 SPLCVIVFVLIMVVGKLVVLNLFIALLLNSF------------SNEEKDGNPEGETRKTK 819
Query: 689 TKTRSQKVDVLLHHMLSAELQKSC 712
+ + + M A LQ C
Sbjct: 820 VQLALDRFSRAFYFMARA-LQNFC 842
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 128/314 (40%), Gaps = 44/314 (14%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSY 470
++ + F I +++++ A+I E ++ + + + +F +I++LEM LK ++
Sbjct: 1032 VKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLEMILKWVAF 1091
Query: 471 GFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
GF Y+ DFL+ V+V G ++T PN ++F R LR +R L
Sbjct: 1092 GFRKYFTSAWCWLDFLI--VVVSGLSLT-NLPNLKSF-------------RNLRALRPLR 1135
Query: 531 HVQQYRGF---VATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG----IVNAG--NAK 581
+ Q+ G V ++ IP+++ L I+C LGV F G +N N
Sbjct: 1136 ALSQFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINGTDINKY 1195
Query: 582 LEETDLADDDYLL----------FNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 631
+++ + L NF++ N + L + W M + + G
Sbjct: 1196 FNASNVPNQSQCLVSNYTWKVPNVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRGKDE 1255
Query: 632 TLA---------YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRE 682
A YFV F + LNL I +++ F + + + ++ +
Sbjct: 1256 QPAFEANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYN 1315
Query: 683 RRRRVGTKTRSQKV 696
+++GTK + +
Sbjct: 1316 AMKKLGTKKPQKPI 1329
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 416 FGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE-- 473
F I +I+N + + +++D + SS E+VF IYVLE +KI + GF
Sbjct: 131 FSMFIICTVIINCMFMANNSSVDSRPSS-----NIPEYVFIGIYVLEAVIKILARGFIVD 185
Query: 474 --NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMH 531
+Y RD N DF IVIG I FL N + L R R++R L
Sbjct: 186 EFSYLRDPWNWLDF-----IVIGTAI------APCFLGNK--VNNLSTLRTFRVLRALKA 232
Query: 532 VQQYRGFVATFLTLIPSLMPYLG----TIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+ G L+ S+ + T+FC+ I+ +G Q+F GI++ K
Sbjct: 233 ISVISGLKVIVGALLRSVKKLVDVMVLTLFCLS-IFALVGQQLFMGILSQKCIK 285
>sp|C9D7C2|CAC1A_APIME Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis
mellifera GN=CAC PE=2 SV=1
Length = 1904
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 35/269 (13%)
Query: 406 KLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMAL 465
K+ + ST F Y I ++++N V ++++ Q + ++ + + F ++ +E L
Sbjct: 1215 KIWRIVVSTPFEYFIMGLIVLNTVLLMMK--FHRQSDAYKNTLKYMNMCFTGMFTVECIL 1272
Query: 466 KIYSYGFENYWRDGQNRFDFLVTWVIVIGETI-TLASPNGQTFLSNGEWIRYLLLARMLR 524
KI ++G N+++D N FDF + VIG + L G+ F++ G +L L R R
Sbjct: 1273 KIAAFGVRNFFKDAWNTFDF----ITVIGSIVDALVIEFGENFINVG----FLRLFRAAR 1324
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNAKLE 583
LI+LL R + TF+ +L PY+ + + IY +G+Q+FG I + +
Sbjct: 1325 LIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIALDADTSIT 1383
Query: 584 ETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-----------QSYKELTGTAWT 632
+ + NF + G++ LF W M ++ K+ G
Sbjct: 1384 KHN---------NFQSFIQGLMLLFRCATGEAWPNIMLSCVKGRPCDAKAGKQEGGCGSN 1434
Query: 633 L--AYFVSFYLITVLLLLNLVIAFVLEAF 659
+ AYFVSF L+LNL +A +++ F
Sbjct: 1435 IAYAYFVSFIFFCSFLMLNLFVAVIMDNF 1463
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 407 LKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALK 466
++ ++S KF + + +++ N V V VE Q L EFVF +++LEM +K
Sbjct: 561 IRKSVKSQKFYWFVIVLVFFNTVCVAVEHYG--QPQWLTDFLYFAEFVFLALFMLEMFIK 618
Query: 467 IYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLI 526
+Y+ G Y+ NRFD +V + E I +G LS L R+LR+
Sbjct: 619 VYALGPRTYFDSSFNRFDCVVISGSIF-EVIWSEVKSGSFGLS------VLRALRLLRIF 671
Query: 527 RLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETD 586
++ + + R V + L+ + S++ L +F I+ LG+Q+FGG N
Sbjct: 672 KVTKYWKSLRNLVISLLSSMRSIISLLFLLFLFILIFALLGMQLFGGQFN---------- 721
Query: 587 LADDDYLLFNFNDYPNGMVTLFNLLVMGNW-QVWMQSYKELTGTAWTLAYFVSFYLITVL 645
D NFN +P ++T+F +L +W +V Q + G + Y S Y I ++
Sbjct: 722 -FDSGTPPTNFNTFPIALLTVFQILTGEDWNEVMYQGIESQGGHKKGMIY--SLYFIVLV 778
Query: 646 L-----LLNLVIAFVLEAFFAEMELESS 668
L LLN+ +A ++ EL ++
Sbjct: 779 LFGNYTLLNVFLAIAVDNLANAQELSAA 806
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 119/292 (40%), Gaps = 52/292 (17%)
Query: 416 FGYMISIILIVNLVAVIVETTLDIQESS-LQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 472
F Y + + +I N V + +E L Q+ + L + E F I+ +E +LKI + GF
Sbjct: 170 FEYAVLLTIIANCVVLALEEHLPKQDKTILAQKLEATEIYFLGIFCVEASLKILALGFVL 229
Query: 473 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
+Y R+ N DF V V+ IT S + + +R L R+LR ++L+
Sbjct: 230 HRGSYLRNIWNIMDFFV----VVTGFITAFSQGIELDMD----LRTLRAIRVLRPLKLVS 281
Query: 531 HVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG-------NAKL 582
+ + + + + + P L L +F + I+ +G++ + G ++ N +
Sbjct: 282 GIPSLQVVLKSIIKAMAPLLQIGLLVLFAI-VIFAIIGLEFYSGTLHKTCYSIRDINVIV 340
Query: 583 EETDLAD------------------------------DDYLLFNFNDYPNGMVTLFNLLV 612
+E + A ++ + +F++ M+T+F +
Sbjct: 341 KEGEQASPCNTDNKSEAPFGAHVCDANISTCMDHWEGPNFGITSFDNIGFAMLTVFQCIT 400
Query: 613 MGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
M W + + G+ + YF+ ++ +LNLV+ + F E E
Sbjct: 401 MEGWTAILYWTNDALGSTYNWIYFIPLIVLGSFFMLNLVLGVLSGEFAKERE 452
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 123/298 (41%), Gaps = 47/298 (15%)
Query: 416 FGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF--- 472
F + I +++ ++ +A+ E + ++S V ++ F ++ +EM LKI G
Sbjct: 899 FDFFIMVVISLSSIALAAEDPV-WEDSPRNEVLNYFDYAFTGVFTVEMILKIIDLGIILH 957
Query: 473 -ENYWRDGQNRFDFLVTWVIVIGETITLA-SPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
+Y R+ N D V+VI ++ A G + N I+ L + R+LR ++ +
Sbjct: 958 PGSYLREFWNIMDA----VVVICAAVSFAFDMTGSSAGQNLSTIKSLRVLRVLRPLKTIK 1013
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG--IVNAGNAKLEETDLA 588
V + + + + +++ L Q I+ + VQ+F G + +K + D
Sbjct: 1014 RVPKLKAVFDCVVNSLKNVINILIVYILFQFIFAVIAVQLFNGKFFYCSDESKYTQQDCQ 1073
Query: 589 ------DDDYLL------------FNFNDYPNGMVTLFNLLVMGNW----QVWMQSYKEL 626
+D LL F++++ M+TLF + W Q M + E
Sbjct: 1074 GQYFVFEDGALLPEPKKREWQSQFFHYDNVMAAMLTLFAVQTGEGWPQILQNSMAATYED 1133
Query: 627 TGTAWTLA-----YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGE 679
G +++ ++++ +N+ +A ++ F E+ E E +DGE
Sbjct: 1134 KGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIITF--------QEQGEAELQDGE 1183
>sp|P04774|SCN1A_RAT Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus
GN=Scn1a PE=2 SV=1
Length = 2009
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 38/286 (13%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F I I++ +N+V ++VET D Q + S+ + VF ++ E LK+ S
Sbjct: 1537 FVTRQVFDISIMILICLNMVTMMVET--DDQSDYVTSILSRINLVFIVLFTGECVLKLIS 1594
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1595 LR-HYYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1650
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1651 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1701
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-------------------QSYKELTGT- 629
DD +FNF + N M+ LF + W + S K G
Sbjct: 1702 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNP 1759
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ + +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1760 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1804
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YG++ Y+ + DFL+ V ++ T
Sbjct: 1244 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLT--- 1300
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1301 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1357
Query: 560 QCIYCSLGVQIFGG---------------IVNAGNAK-----LEETDLADDDYLLFNFND 599
I+ +GV +F G I N +E + A + NF++
Sbjct: 1358 WLIFSIMGVNLFAGKFYHCVNTTTGDTFEITEVNNHSDCLKLIERNETARWKNVKVNFDN 1417
Query: 600 YPNGMVTLFNLLVMGNWQVWM------------QSYKELTGTAWTLAYFVSFYLITVLLL 647
G ++L + W M Y+E + + YFV F +
Sbjct: 1418 VGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEE---SLYMYLYFVIFIIFGSFFT 1474
Query: 648 LNLVIAFVLEAF 659
LNL I +++ F
Sbjct: 1475 LNLFIGVIIDNF 1486
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 35/316 (11%)
Query: 337 ELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAI-ALRFQKEDVPSCFENL 395
E+ K R+ F + D L+D + + + L N + L ++ P C+
Sbjct: 688 EMRKRRS------SSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKF 741
Query: 396 PSIY----HSPFSEKLKAFIR----STKFGYMISIILIVNLVAVIVETTLDIQESSLQSV 447
+I+ SP+ K+K + I+I +++N + + +E + V
Sbjct: 742 SNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEH--FNHV 799
Query: 448 WQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQT 506
VF I+ EM LKI + Y+++G N FD F+VT +V + LA+ G +
Sbjct: 800 LTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLV---ELGLANVEGLS 856
Query: 507 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 566
L + +R LA+ + +L+ + LTL+ +++ + I+ +
Sbjct: 857 VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVV 907
Query: 567 GVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKEL 626
G+Q+FG K+ D ++ ND+ + + +F +L G W M E+
Sbjct: 908 GMQLFGKSYKDCVCKIA----TDCKLPRWHMNDFFHSFLIVFRVLC-GEWIETMWDCMEV 962
Query: 627 TGTAWTLAYFVSFYLI 642
G A L F+ +I
Sbjct: 963 AGQAMCLTVFMMVMVI 978
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 45/254 (17%)
Query: 353 ELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIY-HSPFSEKLKAFI 411
E++ + L+D + IN F L A+ F+ F ++Y +PF+ K I
Sbjct: 71 EMVSEPLEDLDPYYINKKTFIVLNKGKAI-FR-------FSATSALYILTPFNPLRKIAI 122
Query: 412 R---STKFGYMISIILIVNLVAVIVETTLDIQESSLQSVW-QEVEFVFGWIYVLEMALKI 467
+ + F +I ++ N V + + D W + VE+ F IY E +KI
Sbjct: 123 KILVHSLFSMLIMCTILTNCVFMTMSNPPD---------WTKNVEYTFTGIYTFESLIKI 173
Query: 468 YSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARML 523
+ GF + RD N DF V + E + L N +R + R L
Sbjct: 174 IARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLG---------NVSALRTFRVLRAL 224
Query: 524 RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVN------- 576
+ I ++ ++ G + + + +M + T+FC+ ++ +G+Q+F G +
Sbjct: 225 KTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALIGLQLFMGNLRNKCVQWP 281
Query: 577 AGNAKLEETDLADD 590
NA LEE + +
Sbjct: 282 PTNASLEEHSIEKN 295
>sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo
sapiens GN=CACNA1H PE=1 SV=4
Length = 2353
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 26/276 (9%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 462
FS KL+ + S F I + ++VN +++ VE Q L + + VF ++ LE
Sbjct: 782 FSGKLRRIVDSKYFSRGIMMAILVNTLSMGVE--YHEQPEELTNALEISNIVFTSMFALE 839
Query: 463 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
M LK+ + G Y R+ N FD ++ VI + E + A G + L +R L L R
Sbjct: 840 MLLKLLACGPLGYIRNPYNIFDGIIV-VISVWEIVGQAD-GGLSVLRTFRLLRVLKLVRF 897
Query: 523 LR-LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
L L R L+ + + VATF TL LM + IF I+ LG+ +FG +
Sbjct: 898 LPALRRQLVVLVKTMDNVATFCTL---LMLF---IF----IFSILGMHLFGCKFSL---- 943
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTA-WTLAYFVSFY 640
+TD D NF+ +VT+F +L +W V + Y + T+ W YFV+
Sbjct: 944 --KTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVL--YNGMASTSSWAALYFVALM 999
Query: 641 LITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDK 676
+L NL++A ++E F AE + S+ +EDK
Sbjct: 1000 TFGNYVLFNLLVAILVEGFQAEGDANRSDT--DEDK 1033
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 27/289 (9%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIY 459
+SP + + S I+ I+ VN++ + +E Q SL + +VF ++
Sbjct: 1603 YSPTRRSIHSLCTSHYLDLFITFIICVNVITMSMEHY--NQPKSLDEALKYCNYVFTIVF 1660
Query: 460 VLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS-NGEWIRYLL 518
V E ALK+ ++GF +++D N+ D + + ++G ITL L N IR +
Sbjct: 1661 VFEAALKLVAFGFRRFFKDRWNQLDLAIVLLSLMG--ITLEEIEMSAALPINPTIIRIMR 1718
Query: 519 LARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG 578
+ R+ R+++LL R + T + +P + + IY +LGV++FG +
Sbjct: 1719 VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRL---- 1774
Query: 579 NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ-SYKELTG--------- 628
+ E + + F+++ +TLF + NW M+ + +E +
Sbjct: 1775 --ECSEDNPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECSREDKHCLSYL 1832
Query: 629 TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKD 677
A + YFV+F L+ +L+N+V+A +++ LE S K ED +
Sbjct: 1833 PALSPVYFVTFVLVAQFVLVNVVVAVLMK------HLEESNKEAREDAE 1875
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 41/288 (14%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFGWIYVL 461
F + I F +++ + + +N V + +E DI S + V+ V ++F I+V
Sbjct: 1283 FRVSCQKVITHKMFDHVVLVFIFLNCVTIALERP-DIDPGSTERVFLSVSNYIFTAIFVA 1341
Query: 462 EMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYL 517
EM +K+ + G Y + N D L+ V ++ + +AS G L L
Sbjct: 1342 EMMVKVVALGLLSGEHAYLQSSWNLLDGLLVLVSLVDIVVAMASAGGAKILG------VL 1395
Query: 518 LLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGVQIFGG 573
+ R+LR +R L + + G TLI SL P +G I + C I+ LGVQ+F G
Sbjct: 1396 RVLRLLRTLRPLRVISRAPGLKLVVETLISSLRP-IGNIVLICCAFFIIFGILGVQLFKG 1454
Query: 574 ------------IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ 621
I + Y NF++ +++LF L W M
Sbjct: 1455 KFYYCEGPDTRNISTKAQCRAAHYRWVRRKY---NFDNLGQALMSLFVLSSKDGWVNIMY 1511
Query: 622 SYKELTG---------TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 660
+ G W L YF+SF LI +LN+ + V+E F
Sbjct: 1512 DGLDAVGVDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFH 1559
>sp|Q00975|CAC1B_HUMAN Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo
sapiens GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 33/315 (10%)
Query: 370 DEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKL-----KAFIRSTKFGYMISIIL 424
D FADLC A+ F + + S S + EK+ + +++ F +++ ++
Sbjct: 436 DRFADLC-AVGSPFARASLKSGKTESSSYFRR--KEKMFRFFIRRMVKAQSFYWVVLCVV 492
Query: 425 IVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD 484
+N + V + Q L + EFVF +++ EM+LK+Y G +Y+R N FD
Sbjct: 493 ALNTLCVAM--VHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFD 550
Query: 485 FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLT 544
F V V + E + A G +F I L R+LR+ ++ + R V + L
Sbjct: 551 FGVI-VGSVFEVVWAAIKPGSSF-----GISVLRALRLLRIFKVTKYWSSLRNLVVSLLN 604
Query: 545 LIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGM 604
+ S++ L +F ++ LG+Q+FGG N D+ NF+ +P +
Sbjct: 605 SMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----------FQDETPTTNFDTFPAAI 653
Query: 605 VTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAFVLEAF 659
+T+F +L +W M E G + F SFY I + L LLN+ +A ++
Sbjct: 654 LTVFQILTGEDWNAVMYHGIESQG-GVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNL 712
Query: 660 FAEMELESSEKCEEE 674
EL E+ EE
Sbjct: 713 ANAQELTKDEEEMEE 727
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 462
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ +E
Sbjct: 1460 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSME 1517
Query: 463 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
LKI ++G NY+RD N FDF VT + I + + F++ + +L L R
Sbjct: 1518 CVLKIIAFGVLNYFRDAWNVFDF-VTVLGSITDILVTEIAETNNFIN----LSFLRLFRA 1572
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNAK 581
RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1573 ARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIA------ 1625
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM--------------QSYKELT 627
DDD + N++ + L L + W Q+
Sbjct: 1626 ------LDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNQACDEQANATEC 1679
Query: 628 GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
G+ + YFVSF + L+LNL +A +++ F
Sbjct: 1680 GSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1711
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 109/281 (38%), Gaps = 45/281 (16%)
Query: 416 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 472
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 156
Query: 473 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
+Y R+G N DF+V ++ G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDFVVVLTGILATA-------GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 531 HVQQYRGFVATFLTLIPSLMP-------------------YLGTIFCVQCIYCSLGVQIF 571
+ + + + + + L+ Y+G F C S +
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK-FHKACFPNSTDAEPV 263
Query: 572 GGIV--NAGNAKLEETDLADDDYL------LFNFNDYPNGMVTLFNLLVMGNWQVWMQSY 623
G A+L E D +Y + NF++ ++T+F + M W + +
Sbjct: 264 GDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNT 323
Query: 624 KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 324 NDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C
OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1
Length = 2171
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 41/277 (14%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV-EFVFGWIYVLEMALKIYS 469
+ ST F Y++ +++++N + + ++ +S L + + +F ++ +EM LK+ +
Sbjct: 1246 VNSTYFEYLMFVLILLNTICLAMQ---HYGQSCLFKIAMNILNMLFTGLFTVEMILKLIA 1302
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS---NGE-----WIRYLLLAR 521
+ + Y+ D N FDFL+ +I ++ +P T S N E I + L R
Sbjct: 1303 FKPKGYFSDPWNVFDFLIVIGSIIDVILSETNPAEHTQCSPSMNAEENSRISITFFRLFR 1362
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFGGIVNAGNA 580
++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1363 VMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQVFGKIALNDTT 1421
Query: 581 KLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------------- 623
++ + NF +P ++ LF WQ M +
Sbjct: 1422 EINRNN---------NFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPHNSTE 1472
Query: 624 -KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+ G+++ + YF+SFY++ L++NL +A +++ F
Sbjct: 1473 GETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNF 1509
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 401 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 459
+P + + F +I + + N VA+ + +S + S + VE++F I+
Sbjct: 141 NPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIF 200
Query: 460 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLAS-PNGQTFLSN---G 511
+E LK+ +YG Y R+G N DF++ V + + A+ +G L G
Sbjct: 201 TVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAG 260
Query: 512 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQI 570
++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+++
Sbjct: 261 FDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGLEL 319
Query: 571 FGGIVNAG--NAKLEETDLADDD----------------------------YLLFNFNDY 600
F G ++ N + A+DD + + NF+++
Sbjct: 320 FMGKMHKTCYNQEGVADVPAEDDPSPCALETGHGRQCQNGTVCKPGWDGPKHGITNFDNF 379
Query: 601 PNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 657
M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 380 AFAMLTVFQCITMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSG 436
Query: 658 AFFAEME 664
F E E
Sbjct: 437 EFSKERE 443
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 406 KLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMAL 465
K +A ++S F +++ ++ +N + + E Q L V ++ EM L
Sbjct: 546 KCRAAVKSNVFYWLVIFLVFLNTLTIASEHY--NQPHWLTEVQDTANKALLALFTAEMLL 603
Query: 466 KIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLR 524
K+YS G + Y+ NRFD F+V I+ ETI + +T + + I L R+LR
Sbjct: 604 KMYSLGLQAYFVSLFNRFDCFIVCGGIL--ETILV-----ETKVMSPLGISVLRCVRLLR 656
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
+ ++ + VA+ L + S+ L +F I+ LG+Q+FGG N +
Sbjct: 657 IFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRR 716
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-QSYKELTGTAW----TLAYFVSF 639
+ F+++P ++T+F +L +W M G ++ YF+
Sbjct: 717 S----------TFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIIL 766
Query: 640 YLITVLLLLNLVIAFVLEAFFAEMELESSE 669
++ +LLN+ +A ++ L S++
Sbjct: 767 FICGNYILLNVFLAIAVDNLADAESLTSAQ 796
Score = 33.9 bits (76), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 113/269 (42%), Gaps = 51/269 (18%)
Query: 452 EFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTF 507
+ VF I+ +E+ALK+ +YG ++ R+ N D LV V +I I ++ N
Sbjct: 967 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAIN---- 1022
Query: 508 LSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLG 567
++ L + R+LR +R + + + V I ++ + +Q ++ +G
Sbjct: 1023 -----VVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIG 1077
Query: 568 VQIFGGIVNAGNAKLEETDL-----------ADDDYLL----------FNFNDYPNGMVT 606
VQ+F G + + ++T+ + D+ + F+F++ M+
Sbjct: 1078 VQLFKGKLYTCSDSSKQTEAECKGNYITYKDGEVDHPIIQPRSWENSKFDFDNVLAAMMA 1137
Query: 607 LFNLLVMGNWQVWM----QSYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLE 657
LF + W + S+ E G + +F+ + +I ++N+ + FV+
Sbjct: 1138 LFTVSTFEGWPELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIV 1197
Query: 658 AFFAEMELESSEKCEEEDKDGEPRERRRR 686
F E+ E+E K+ E + +R+
Sbjct: 1198 TF--------QEQGEQEYKNCELDKNQRQ 1218
>sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo
sapiens GN=CACNA1E PE=1 SV=3
Length = 2313
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 36/284 (12%)
Query: 395 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 454
+P H+ F ++ F+ S F Y I ++ +N V ++++ + + + +
Sbjct: 1460 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYY--SAPCTYELALKYLNIA 1516
Query: 455 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 514
F ++ LE LK+ ++GF NY+RD N FDF + VIG + + + ++G +
Sbjct: 1517 FTMVFSLECVLKVIAFGFLNYFRDTWNIFDF----ITVIGSITEIILTDSKLVNTSGFNM 1572
Query: 515 RYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGG 573
+L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1573 SFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF-- 1629
Query: 574 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------- 620
GN KL+E + NF + ++ LF WQ M
Sbjct: 1630 ----GNIKLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDT 1682
Query: 621 -----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
Q+ E GT YFVSF L+LNL +A +++ F
Sbjct: 1683 TAPSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1726
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM+LK+Y G Y+ N FDF VT V I E + G +F I L R
Sbjct: 522 EMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSIFEVVWAIFRPGTSF-----GISVLRALR 575
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LR+ ++ + R V + ++ + S++ L +F ++ LG+Q+FGG N
Sbjct: 576 LLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFN----- 630
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLAYFV 637
+D NF+ +P ++T+F +L +W M +S ++ W+ YF+
Sbjct: 631 ------FNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSAIYFI 684
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEE 674
L LLN+ +A ++ EL E+ EEE
Sbjct: 685 VLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEE 721
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 408 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 466
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 83 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 142
Query: 467 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 143 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRTLRAVRV 194
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 575
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 195 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMN 254
Query: 576 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 619
N+G A E D + + F++ ++T+F + M W
Sbjct: 255 NSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 314
Query: 620 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 315 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 359
>sp|Q2XVR6|SC4AB_TAKRU Sodium channel protein type 4 subunit alpha B OS=Takifugu rubripes
GN=scn4ab PE=3 SV=1
Length = 1719
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 36/294 (12%)
Query: 400 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIY 459
+PF + + F I +++ +N+V ++VET D Q + V + VF I+
Sbjct: 1228 ENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMMVET--DEQSDKKEEVLYWINVVFILIF 1285
Query: 460 VLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLL 519
E LKI + +Y+ G N FDF+V + ++G + LA + F+S R + L
Sbjct: 1286 TTECTLKIIALR-RHYFSIGWNIFDFVVVILSILG--LLLADIIEKYFVS-PTLFRVIRL 1341
Query: 520 ARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN 579
AR+ R++RL+ + R + + +P+L +F + I+ G+ F
Sbjct: 1342 ARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF-------- 1393
Query: 580 AKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK----------ELTGT 629
A +++ L DD +FNF + N M+ LF + W + E GT
Sbjct: 1394 AYVKKEALIDD---MFNFETFGNSMICLFMITTSAGWDGLLSPIMNTPPDCDPNVENPGT 1450
Query: 630 ---------AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEE 674
A +A+F ++ +++ L+++N+ IA +LE F E S CE++
Sbjct: 1451 TVRGNCGSPAIGIAFFSTYIIMSFLVVVNMFIAIILENFNVATEESSDPLCEDD 1504
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 119/283 (42%), Gaps = 36/283 (12%)
Query: 444 LQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN 503
++S+ + + VF +++V+EM LK ++YGF++Y+ + DFL+ V ++ T +
Sbjct: 948 IKSILEYADKVFTYVFVMEMVLKWFAYGFKSYFSNAWCWLDFLIVDVSLVSLTANIL--- 1004
Query: 504 GQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIY 563
G + L + +R L R LR +R L + R V + +PS+ L I+
Sbjct: 1005 GYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIF 1061
Query: 564 CSLGVQIFGG----IVNAGNAKLEETDLADDD-----YLLFNFND---------YPNGMV 605
+GV +F G N + ++ +T + D+ + NF + Y N +
Sbjct: 1062 SIMGVNLFAGKFSYCFNETSQEIIDTKVVDNKTECIALIKANFTEVRWKNVKVNYDNVGI 1121
Query: 606 TLFNLLVMGNWQVW------------MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIA 653
+LL + ++ W ++S + YFV F + LNL I
Sbjct: 1122 GYLSLLQVATFKGWTDIMYAAVDSRDVESQPIYEVNLYMYLYFVIFIIFGSFFTLNLFIG 1181
Query: 654 FVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKV 696
+++ F + + ++ + +++G+K + V
Sbjct: 1182 VIIDNFNQQKAKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPV 1224
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 49/319 (15%)
Query: 332 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCN----AIALRFQKED 387
I + E L K R +R+E + +D H LC A A F K D
Sbjct: 446 IHILEALKK-REEEQAARKEPHSTVEGFEDDH----------RLCPPCWYAFANIFLKWD 494
Query: 388 VPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVE---TTLDIQESSL 444
C+ +L E L A + I+I +I+N V + +E + D +E L
Sbjct: 495 CCGCWRHL--------KECLYAIVMDPFVDLGITICIILNTVFMAMEHYPMSADFEE--L 544
Query: 445 QSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNG 504
SV VF I+ EM KI + Y++ G N FD ++ + ++ + LA+ G
Sbjct: 545 LSVGN---LVFTGIFTGEMVFKILAMDPYFYFQVGWNIFDSIIVTISLV--ELGLANVQG 599
Query: 505 QTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYC 564
+ L + +R LA+ + +L+ + LTL+ +++ + I+
Sbjct: 600 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFA 650
Query: 565 SLGVQIFGGIVNAGNAKLEETDLADDDYL-LFNFNDYPNGMVTLFNLLVMGNWQVWMQSY 623
+G+Q+FG N K +++D L ++ ND+ + + +F +L G W M
Sbjct: 651 VVGMQLFG-----KNYKDCVCRISEDCVLPRWHMNDFFHAFLIIFRVLC-GEWIESMWDC 704
Query: 624 KELTGTAWTLAYFVSFYLI 642
E++G L F+ +I
Sbjct: 705 MEVSGQTMCLIVFMMVLVI 723
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 449 QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNG 504
+ +E+VF +IY E +KI S GF + +D N DF+V + + E + L +
Sbjct: 153 KTMEYVFTFIYTFEATIKILSRGFCVGKFTFLKDPWNWLDFMVISMAYLTELVDLGN--- 209
Query: 505 QTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLG-TIFCVQCIY 563
+ L R+LR ++ + + + V + + L + T+FC+ ++
Sbjct: 210 ---------VSVLRTFRVLRALKTITVIPGLKTIVGALIQSVRKLADAMVLTVFCLS-VF 259
Query: 564 CSLGVQIFGG 573
+G+Q+F G
Sbjct: 260 ALIGLQLFMG 269
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 175 LLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNV 234
L +L+AD ++ ++SP F + R+A RV+ I + +R LF L L N+
Sbjct: 1318 LGLLLAD-IIEKYFVSPTLFRVI--RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNI 1374
Query: 235 -LALGLLFLLFS----SWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPA 289
L L L+ +FS S AYV E + F +FG ++ +F++ T++ + P
Sbjct: 1375 GLLLFLIMFIFSIFGMSNFAYVKKEALIDDMFNFETFGNSMICLFMITTSAGWDGLLSPI 1434
Query: 290 YNFKSQLAKQVSEMDRMRRRTLGK 313
N V R G
Sbjct: 1435 MNTPPDCDPNVENPGTTVRGNCGS 1458
>sp|Q99250|SCN2A_HUMAN Sodium channel protein type 2 subunit alpha OS=Homo sapiens GN=SCN2A
PE=1 SV=3
Length = 2005
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 38/286 (13%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F I I++ +N+V ++VET D Q + ++ + VF ++ E LK+ S
Sbjct: 1527 FVTKQVFDISIMILICLNMVTMMVET--DDQSQEMTNILYWINLVFIVLFTGECVLKLIS 1584
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
+ Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1585 LRY-YYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1640
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1641 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1691
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY-----------KELTGTAWT------ 632
DD +FNF + N M+ LF + W + K+ G++
Sbjct: 1692 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPDKDHPGSSVKGDCGNP 1749
Query: 633 ---LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1750 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1794
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YGF+ Y+ + DFL+ V ++ T
Sbjct: 1234 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQVYFTNAWCWLDFLIVDVSLVSLT--- 1290
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1291 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1347
Query: 560 QCIYCSLGVQIFGG-----------------IVN---AGNAKLEETDLADDDYLLFNFND 599
I+ +GV +F G +VN A +E A + NF++
Sbjct: 1348 WLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQTARWKNVKVNFDN 1407
Query: 600 YPNGMVTLFNLLVMGNWQVWMQS---------YKELTGTAWTLAYFVSFYLITVLLLLNL 650
G ++L + W M + + + YFV F + LNL
Sbjct: 1408 VGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNL 1467
Query: 651 VIAFVLEAF 659
I +++ F
Sbjct: 1468 FIGVIIDNF 1476
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 129/310 (41%), Gaps = 48/310 (15%)
Query: 327 NKEQCIKLFEELNKYRTLPNISRE-EFELIFDELDDTHDFKINLDEFADLCNAIALRFQK 385
+ E K +L ++LP I + E++ L+D + IN F L A+
Sbjct: 45 DDENGPKPNSDLEAGKSLPFIYGDIPPEMVSVPLEDLDPYYINKKTFIVLNKGKAI---- 100
Query: 386 EDVPSCFENLPSIY-HSPFSEKLKAFIR---STKFGYMISIILIVNLVAVIVETTLDIQE 441
S F P++Y +PF+ K I+ + F +I ++ N V + + D
Sbjct: 101 ----SRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMSNPPD--- 153
Query: 442 SSLQSVW-QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGET 496
W + VE+ F IY E +KI + GF + RD N DF V + E
Sbjct: 154 ------WTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEF 207
Query: 497 ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTI 556
+ L N +R + R L+ I ++ ++ G + + + +M + T+
Sbjct: 208 VDLG---------NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTV 256
Query: 557 FCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFN----FNDYPNGMVTLFNLLV 612
FC+ ++ +G+Q+F G N N L+ D+ N FN+ +G T FN V
Sbjct: 257 FCLS-VFALIGLQLFMG--NLRNKCLQWP--PDNSSFEINITSFFNNSLDGNGTTFNRTV 311
Query: 613 -MGNWQVWMQ 621
+ NW +++
Sbjct: 312 SIFNWDEYIE 321
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 22/225 (9%)
Query: 420 ISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRD 478
I+I +++N + + +E + Q SS+ SV VF I+ EM LKI + Y+++
Sbjct: 765 ITICIVLNTLFMAMEHYPMTEQFSSVLSVGN---LVFTGIFTAEMFLKIIAMDPYYYFQE 821
Query: 479 GQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRG 537
G N FD F+V+ ++ + LA+ G + L + +R LA+ + +L+ +
Sbjct: 822 GWNIFDGFIVSLSLM---ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV 878
Query: 538 FVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNF 597
LTL+ +++ + I+ +G+Q+FG K+ D + ++
Sbjct: 879 GALGNLTLVLAIIVF---------IFAVVGMQLFGKSYKECVCKISN----DCELPRWHM 925
Query: 598 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLI 642
+D+ + + +F +L G W M E+ G L F+ +I
Sbjct: 926 HDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQTMCLTVFMMVMVI 969
>sp|P35498|SCN1A_HUMAN Sodium channel protein type 1 subunit alpha OS=Homo sapiens GN=SCN1A
PE=1 SV=2
Length = 2009
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 38/286 (13%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F I I++ +N+V ++VET D Q + ++ + VF ++ E LK+ S
Sbjct: 1537 FVTRQVFDISIMILICLNMVTMMVET--DDQSEYVTTILSRINLVFIVLFTGECVLKLIS 1594
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1595 LR-HYYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1650
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1651 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1701
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-------------------QSYKELTGT- 629
DD +FNF + N M+ LF + W + S K G
Sbjct: 1702 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNP 1759
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ + +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1760 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1804
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YG++ Y+ + DFL+ V ++ T
Sbjct: 1244 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLT--- 1300
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1301 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1357
Query: 560 QCIYCSLGVQIFGG---------------IVNAGNAK-----LEETDLADDDYLLFNFND 599
I+ +GV +F G I + N +E + A + NF++
Sbjct: 1358 WLIFSIMGVNLFAGKFYHCINTTTGDRFDIEDVNNHTDCLKLIERNETARWKNVKVNFDN 1417
Query: 600 YPNGMVTLFNLLVMGNWQVWM------------QSYKELTGTAWTLAYFVSFYLITVLLL 647
G ++L + W M Y+E + + YFV F +
Sbjct: 1418 VGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEE---SLYMYLYFVIFIIFGSFFT 1474
Query: 648 LNLVIAFVLEAF 659
LNL I +++ F
Sbjct: 1475 LNLFIGVIIDNF 1486
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 35/316 (11%)
Query: 337 ELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAI-ALRFQKEDVPSCFENL 395
E+ K R+ F + D L+D + + + L N + L ++ P C+
Sbjct: 688 EMRKRRS------SSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKF 741
Query: 396 PSIY----HSPFSEKLKAFIR----STKFGYMISIILIVNLVAVIVETTLDIQESSLQSV 447
+I+ SP+ K+K + I+I +++N + + +E +V
Sbjct: 742 SNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHY--PMTDHFNNV 799
Query: 448 WQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQT 506
VF I+ EM LKI + Y+++G N FD F+VT +V + LA+ G +
Sbjct: 800 LTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLV---ELGLANVEGLS 856
Query: 507 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 566
L + +R LA+ + +L+ + LTL+ +++ + I+ +
Sbjct: 857 VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVV 907
Query: 567 GVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKEL 626
G+Q+FG K+ +D ++ ND+ + + +F +L G W M E+
Sbjct: 908 GMQLFGKSYKDCVCKIA----SDCQLPRWHMNDFFHSFLIVFRVLC-GEWIETMWDCMEV 962
Query: 627 TGTAWTLAYFVSFYLI 642
G A L F+ +I
Sbjct: 963 AGQAMCLTVFMMVMVI 978
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 54/289 (18%)
Query: 353 ELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIY-HSPFSEKLKAFI 411
E++ + L+D + IN F L A+ F+ F ++Y +PF+ K I
Sbjct: 71 EMVSEPLEDLDPYYINKKTFIVLNKGKAI-FR-------FSATSALYILTPFNPLRKIAI 122
Query: 412 R---STKFGYMISIILIVNLVAVIVETTLDIQESSLQSVW-QEVEFVFGWIYVLEMALKI 467
+ + F +I ++ N V + + D W + VE+ F IY E +KI
Sbjct: 123 KILVHSLFSMLIMCTILTNCVFMTMSNPPD---------WTKNVEYTFTGIYTFESLIKI 173
Query: 468 YSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARML 523
+ GF + RD N DF V + E + L N +R + R L
Sbjct: 174 IARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLG---------NVSALRTFRVLRAL 224
Query: 524 RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVN------- 576
+ I ++ ++ G + + + +M + T+FC+ ++ +G+Q+F G +
Sbjct: 225 KTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALIGLQLFMGNLRNKCIQWP 281
Query: 577 AGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMG-NWQVWMQSYK 624
NA LEE + + + N+N TL N V +W+ ++Q +
Sbjct: 282 PTNASLEEHSIEKN--ITVNYNG------TLINETVFEFDWKSYIQDSR 322
>sp|Q02343|CAC1E_RABIT Voltage-dependent R-type calcium channel subunit alpha-1E
OS=Oryctolagus cuniculus GN=CACNA1E PE=2 SV=1
Length = 2259
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 395 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 454
+P H+ F ++ F+ S F Y I ++ +N V ++++ + + + +
Sbjct: 1450 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYY--SAPCTYELALKYLNIA 1506
Query: 455 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 514
F ++ LE LK+ ++GF NY+RD N FDF + VIG + + + + G +
Sbjct: 1507 FTMVFSLECVLKVIAFGFVNYFRDTWNIFDF----ITVIGSITEIVLTDSKLVNTTGFNM 1562
Query: 515 RYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGG 573
+L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1563 SFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF-- 1619
Query: 574 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------- 620
GN +L+E + NF + ++ LF WQ M
Sbjct: 1620 ----GNIRLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDT 1672
Query: 621 -----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
Q E GT YFVSF L+LNL +A +++ F
Sbjct: 1673 TAPSGQQESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1716
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM+LK+Y G Y+ N FDF VT V I E + G +F I L R
Sbjct: 522 EMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSIFEVVWAIFRPGTSF-----GISVLRALR 575
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LR+ ++ + R V + ++ + S++ L +F ++ LG+Q+FGG N
Sbjct: 576 LLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFN----- 630
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLAYFV 637
+D NF+ +P ++T+F +L +W M +S ++ W+ YF+
Sbjct: 631 ------FNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSAVYFI 684
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEE 674
L LLN+ +A ++ EL E+ EEE
Sbjct: 685 VLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEE 721
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 408 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 466
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 83 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 142
Query: 467 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 143 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRTLRAVRV 194
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 575
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 195 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFVN 254
Query: 576 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 619
N+G A E D + + F++ ++T+F + M W
Sbjct: 255 NSGVLEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 314
Query: 620 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 315 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 359
>sp|Q07652|CAC1E_RAT Voltage-dependent R-type calcium channel subunit alpha-1E OS=Rattus
norvegicus GN=Cacna1e PE=1 SV=1
Length = 2222
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 395 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 454
+P H+ F ++ F+ S F Y I ++ +N V ++++ L + + F
Sbjct: 1412 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAFT 1470
Query: 455 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 514
++ LE LK+ ++GF NY+RD N FDF + VIG + + + ++G +
Sbjct: 1471 M--VFSLECVLKVIAFGFLNYFRDTWNIFDF----ITVIGSITEIILTDSKLVNTSGFNM 1524
Query: 515 RYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGG 573
+L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1525 SFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF-- 1581
Query: 574 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------- 620
GN KL+E + NF + ++ LF WQ M
Sbjct: 1582 ----GNIKLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDT 1634
Query: 621 -----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
Q+ E GT YFVSF L+LNL +A +++ F
Sbjct: 1635 TAPSGQNESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1678
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 462 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 521
EM+LK+Y G Y+ N FDF VT V I E + G +F I L R
Sbjct: 473 EMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSIFEVVWAIFRPGTSF-----GISVLRALR 526
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
+LR+ ++ + R V + ++ + S++ L +F ++ LG+Q+FGG N
Sbjct: 527 LLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFN----- 581
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLAYFV 637
+D NF+ +P ++T+F +L +W M +S ++ W+ YF+
Sbjct: 582 ------FNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSAIYFI 635
Query: 638 SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEE 674
L LLN+ +A ++ EL E+ EEE
Sbjct: 636 VLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEE 672
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 408 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 466
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 34 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 93
Query: 467 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 94 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRTLRAVRV 145
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 575
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 146 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMN 205
Query: 576 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 619
N+G A E D + + F++ ++T+F + M W
Sbjct: 206 NSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 265
Query: 620 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 266 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 310
>sp|Q24270|CAC1D_DROME Voltage-dependent calcium channel type D subunit alpha-1
OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2
Length = 2516
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 57/289 (19%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVW-----QEVEFVFGWIYVLEMA 464
F+ S+ F Y I I++++N V + ++ Q +W + +F ++ LE
Sbjct: 1659 FVTSSSFEYTIFILIMINTVTLAMKFYN-------QPLWYTELLDALNMIFTAVFALEFV 1711
Query: 465 LKIYSYGFENYWRDGQNRFDFLV-----------------TWVIVIGETITLASPNGQTF 507
K+ ++ F+NY+ D N FDF++ T I + + ++
Sbjct: 1712 FKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSA 1771
Query: 508 LSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSL 566
SN I + L R++RL++LL + R + TF+ +L PY+ + + IY +
Sbjct: 1772 GSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIVLLFFIYAVV 1830
Query: 567 GVQIFGGI-VNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK- 624
G+Q+FG I ++ GNA NF + ++ LF WQ M S
Sbjct: 1831 GMQVFGKIALDGGNAITANN----------NFQTFQQAVLVLFRSATGEAWQEIMMSCSA 1880
Query: 625 --------------ELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
E G++ YF+SFY++ L++NL +A +++ F
Sbjct: 1881 QPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNF 1929
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 416 FGYMISIILIVNLVAVIVETTLDIQESSL-QSVWQEVEFVFGWIYVLEMALKIYSYGF-- 472
F ++I + + N +A+ V T +S++ ++VE+VF I+ E +KI +YGF
Sbjct: 617 FEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVL 676
Query: 473 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
Y R+G N DF ++VIG T S + + ++ L R+LR +RL+
Sbjct: 677 HNGAYLRNGWNLLDFT---IVVIGAISTALS----QLMKDAFDVKALRAFRVLRPLRLVS 729
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG-----NAKLEET 585
V + + + L + L + V IY +G+++F G ++ + EE
Sbjct: 730 GVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKACRDEITGEYEEN 789
Query: 586 --------------------DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKE 625
D +D + NF+++ M+T+F + + W + S ++
Sbjct: 790 IRPCGVGYQCPPGYKCYGGWDGPNDG--ITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQD 847
Query: 626 LTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAE 662
G+ W YF+S ++ ++NL++ + F E
Sbjct: 848 AMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKE 884
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 36/292 (12%)
Query: 422 IILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQN 481
II++V L ++ T Q L + + F ++ EM LK+YS GF+ Y+ N
Sbjct: 991 IIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFN 1050
Query: 482 RFDFLVTWVIVIGETITLASPNGQTFLSNGE-----WIRYLLLARMLRLIRLLMHVQQYR 536
RFD V VIG +IT +T L+N + L R+LR+ ++ + +
Sbjct: 1051 RFDCFV----VIG-SIT------ETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLS 1099
Query: 537 GFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFN 596
VA+ L I S+ L +F I+ LG+Q+FGG N D ++ Y + N
Sbjct: 1100 NLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFN--------FDGKEEKYRM-N 1150
Query: 597 FNDYPNGMVTLFNLLVMGNWQ----VWMQSYKELTG-TAWTLAYFVSFYLITVLLLLNLV 651
F+ + ++T+F ++ +W V + +Y ++ A YF+ ++ +LLN+
Sbjct: 1151 FDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVF 1210
Query: 652 IAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHM 703
+A ++ L ++ E +K+ EP + + + + + +D + H+
Sbjct: 1211 LAIAVD------NLADADSLSEVEKEEEPHDESAQKKSHSPTPTIDGMDDHL 1256
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 56/293 (19%)
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
+ FG +I ++ + + E L + L V + ++ F ++ +E+ LK+ SYGF
Sbjct: 1344 SNFGNIILCCIMFSSAMLAAENPLRANDD-LNKVLNKFDYFFTAVFTIELILKLISYGF- 1401
Query: 474 NYWRDG---QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
DG ++ F+ L V+ + ++S N I + + R+LR++R L
Sbjct: 1402 -VLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNA---------ISVVKILRVLRVLRPLR 1451
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCI----YCSLGVQIFGG------------- 573
+ + +G +I ++ +G I V C+ + +GVQ+F G
Sbjct: 1452 AINRAKGLKHVVQCVIVAVK-TIGNIVLVTCLLQFMFAVIGVQLFKGKFFKCTDGSKMTQ 1510
Query: 574 --------IVNAGN---AKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ----V 618
+ + G+ +L E + +++ F+F+D GM+TLF + W V
Sbjct: 1511 DECYGTYLVYDDGDVHKPRLREREWSNN---RFHFDDVAKGMLTLFTVSTFEGWPGLLYV 1567
Query: 619 WMQSYKELTGTAWTLAYFV-----SFYLITVLLLLNLVIAFVLEAFFAEMELE 666
+ S KE G V + +I ++N+ + FV+ F E E E
Sbjct: 1568 SIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQE 1620
>sp|O55017|CAC1B_MOUSE Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus
musculus GN=Cacna1b PE=1 SV=1
Length = 2327
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 33/315 (10%)
Query: 370 DEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKL-----KAFIRSTKFGYMISIIL 424
D F DLC A+ F + + S S + EK+ + +++ F +++ +
Sbjct: 436 DRFVDLC-AVGSPFARASLKSGKTESSSYFRR--KEKMFRFFIRRMVKAQSFYWVV--LC 490
Query: 425 IVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD 484
+V L + V Q L + EFVF +++ EM+LK+Y G +Y+R N FD
Sbjct: 491 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFD 550
Query: 485 FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLT 544
F V V I E + A G +F I L R+LR+ ++ + R V + L
Sbjct: 551 FGVI-VGSIFEVVWAAIKPGTSF-----GISVLRALRLLRIFKVTKYWNSLRNLVVSLLN 604
Query: 545 LIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGM 604
+ S++ L +F ++ LG+Q+FGG N D+ NF+ +P +
Sbjct: 605 SMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----------FQDETPTTNFDTFPAAI 653
Query: 605 VTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAFVLEAF 659
+T+F +L +W M E G + F SFY I + L LLN+ +A ++
Sbjct: 654 LTVFQILTGEDWNAVMYHGIESQG-GVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNL 712
Query: 660 FAEMELESSEKCEEE 674
EL E+ EE
Sbjct: 713 ANAQELTKDEEEMEE 727
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 462
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ +E
Sbjct: 1453 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSME 1510
Query: 463 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGE-TITLASPNGQTFLSNGEWIRYLLLAR 521
LKI ++G NY+RD N FDF V V+G T L + F++ + +L L R
Sbjct: 1511 CILKIIAFGVLNYFRDAWNVFDF----VTVLGSITDILVTEIANNFIN----LSFLRLFR 1562
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNA 580
RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1563 AARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIA----- 1616
Query: 581 KLEETDLADDDYLL---FNFNDYPNGMVTLFN-----------LLVMGNWQVWMQSYKEL 626
DDD + NF + ++ LF L +GN +
Sbjct: 1617 -------LDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASE 1669
Query: 627 TGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
G+ + YFVSF + L+LNL +A +++ F
Sbjct: 1670 CGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1702
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 108/281 (38%), Gaps = 45/281 (16%)
Query: 416 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 472
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 156
Query: 473 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
+Y R+G N DF+V ++ G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDFVVVLTGILATA-------GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 531 HVQQYRGFVATFLTLIPSLMP-------------------YLGTIFCVQCIYCSLGVQIF 571
+ + + + + + L+ Y+G F C S +
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK-FHKACFPNSTDTEPV 263
Query: 572 GGIVNAGNAKLEETDLADD--------DYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY 623
G + + D + ++ + NF++ ++T+F + M W + +
Sbjct: 264 GDFPCGKDPPARQCDGDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNT 323
Query: 624 KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 324 NDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|Q01815|CAC1C_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus
musculus GN=Cacna1c PE=1 SV=1
Length = 2139
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 49/281 (17%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV-EFVFGWIYVLEMALKIYS 469
+ ST F Y++ +++++N + + ++ +S L + + +F ++ +EM LK+ +
Sbjct: 1216 VNSTYFEYLMFVLILLNTICLAMQ---HYGQSCLFKIAMNILNMLFTGLFTVEMILKLIA 1272
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETI------------TLASPNGQTFLSNGEWIRYL 517
+ + Y+ D N FDFL IVIG I T SP+ ++ I +
Sbjct: 1273 FKPKGYFSDPWNVFDFL----IVIGSIIDVILSETNPAEHTQCSPSMSAEENSRISITFF 1328
Query: 518 LLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFGGIVN 576
L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1329 RLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQVFGKIAL 1387
Query: 577 AGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY------------- 623
++ + NF +P ++ LF WQ M +
Sbjct: 1388 NDTTEINRNN---------NFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPS 1438
Query: 624 -----KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+ G+++ + YF+SFY++ L++NL +A +++ F
Sbjct: 1439 NSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNF 1479
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 47/307 (15%)
Query: 401 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 459
+P + + F +I + + N VA+ + +S + S + VE++F I+
Sbjct: 111 NPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIF 170
Query: 460 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLAS-PNGQTFLSN---G 511
+E LK+ +YG Y R+G N DF++ V + + A+ +G L G
Sbjct: 171 TVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAG 230
Query: 512 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQI 570
++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+++
Sbjct: 231 FDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGLEL 289
Query: 571 FGGIVN------------------------------AGNAKLEETDLADDDYLLFNFNDY 600
F G ++ N + + + + NF+++
Sbjct: 290 FMGKMHKTCYNQEGIIDVPAEEDPSPCALETGHGRQCQNGTVCKPGWDGPKHGITNFDNF 349
Query: 601 PNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 657
M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 350 AFAMLTVFQCITMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSG 406
Query: 658 AFFAEME 664
F E E
Sbjct: 407 EFSKERE 413
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 406 KLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMAL 465
K +A ++S F +++ ++ +N + + E Q L V ++ EM L
Sbjct: 516 KCRAAVKSNVFYWLVIFLVFLNTLTIASEHY--NQPHWLTEVQDTANKALLALFTAEMLL 573
Query: 466 KIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLR 524
K+YS G + Y+ NRFD F+V I+ ETI + +T + + I L R+LR
Sbjct: 574 KMYSLGLQAYFVSLFNRFDCFIVCGGIL--ETILV-----ETKIMSPLGISVLRCVRLLR 626
Query: 525 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 584
+ ++ + VA+ L + S+ L +F I+ LG+Q+FGG N +
Sbjct: 627 IFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRR 686
Query: 585 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-QSYKELTGTAW----TLAYFVSF 639
+ F+++P ++T+F +L +W M G ++ YF+
Sbjct: 687 S----------TFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIIL 736
Query: 640 YLITVLLLLNLVIAFVLEAFFAEMELESSE 669
++ +LLN+ +A ++ L S++
Sbjct: 737 FICGNYILLNVFLAIAVDNLADAESLTSAQ 766
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 135/319 (42%), Gaps = 54/319 (16%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQS-VWQEVEFVFGWIYVL 461
F + + T F +I ++++ +++ E +Q +S ++ + ++VF I+ L
Sbjct: 889 FRLQCHRIVNDTIFTNLILFFILLSSISLAAEDP--VQHTSFRNHILGNADYVFTSIFTL 946
Query: 462 EMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYL 517
E+ LK+ +YG ++ R+ N D LV V +I I ++ N ++ L
Sbjct: 947 EIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAIN---------VVKIL 997
Query: 518 LLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNA 577
+ R+LR +R + + + V I ++ + +Q ++ +GVQ+F G +
Sbjct: 998 RVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYT 1057
Query: 578 GNAKLEETDL-----------ADDDYLL----------FNFNDYPNGMVTLFNLLVMGNW 616
+ ++T+ + D+ + F+F++ M+ LF + W
Sbjct: 1058 CSDSSKQTEAECKGNYITYKDGEVDHPIIQPRSWENSKFDFDNVLAAMMALFTVSTFEGW 1117
Query: 617 QVWM----QSYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELES 667
+ S+ E G + +F+ + +I ++N+ + FV+ F
Sbjct: 1118 PELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTF-------- 1169
Query: 668 SEKCEEEDKDGEPRERRRR 686
E+ E+E K+ E + +R+
Sbjct: 1170 QEQGEQEYKNCELDKNQRQ 1188
>sp|Q02294|CAC1B_RAT Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus
norvegicus GN=Cacna1b PE=1 SV=1
Length = 2336
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 35/316 (11%)
Query: 370 DEFADLCNA------IALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISII 423
D F DLC A +L+ K + S F + F ++ +++ F +++ +
Sbjct: 437 DRFVDLCAAGSPFARASLKSGKTESSSYFRRKEKM----FRFLIRRMVKAQSFYWVVLCV 492
Query: 424 LIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRF 483
+ +N + V + Q L + EFVF +++ EM+LK+Y G +Y+R N F
Sbjct: 493 VALNTLCVAM--VHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCF 550
Query: 484 DFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL 543
DF V V I E + A G +F I L R+LR+ ++ + R V + L
Sbjct: 551 DFGVI-VGSIFEVVWAAIKPGTSF-----GISVLRALRLLRIFKVTKYWNSLRNLVVSLL 604
Query: 544 TLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNG 603
+ S++ L +F ++ LG+Q+FGG N D+ NF+ +P
Sbjct: 605 NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----------FQDETPTTNFDTFPAA 653
Query: 604 MVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAFVLEA 658
++T+F +L +W M E G + F SFY I + L LLN+ +A ++
Sbjct: 654 ILTVFQILTGEDWNAVMYHGIESQG-GVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDN 712
Query: 659 FFAEMELESSEKCEEE 674
EL E+ EE
Sbjct: 713 LANAQELTKDEEEMEE 728
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 462
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ LE
Sbjct: 1462 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSLE 1519
Query: 463 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGE-TITLASPNGQTFLSNGEWIRYLLLAR 521
LKI ++G NY+RD N FDF V V+G T L + F++ + +L L R
Sbjct: 1520 CILKIIAFGVLNYFRDAWNVFDF----VTVLGSITDILVTEIANNFIN----LSFLRLFR 1571
Query: 522 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNA 580
RLI+L R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1572 AARLIKLCRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIALDDGT 1630
Query: 581 KLEETDLADDDYLLFNFNDYPNGMVTLFN-----------LLVMGNWQVWMQSYKELTGT 629
+ + NF + ++ LF L +GN + G+
Sbjct: 1631 SINRHN---------NFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASECGS 1681
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
+ YFVSF + L+LNL +A +++ F
Sbjct: 1682 DFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1711
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 43/280 (15%)
Query: 416 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 472
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 156
Query: 473 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
+Y R+G N DF V+V+ E + A G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDF----VVVLTEILATA---GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG------IVNAGNA---- 580
+ + + + + + L+ +F ++ +G++ + G N+ +A
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPNSTDAEPVG 264
Query: 581 -----KLEETDLADDD-----------YLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK 624
K L D D + + NF++ ++T+F + M W + +
Sbjct: 265 DFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTN 324
Query: 625 ELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 325 DAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|P04775|SCN2A_RAT Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus
GN=Scn2a PE=1 SV=1
Length = 2005
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F I I++ +N+V ++VET D Q + ++ + VF ++ E LK+ S
Sbjct: 1527 FVTKQVFDISIMILICLNMVTMMVET--DDQSQEMTNILYWINLVFIVLFTGECVLKLIS 1584
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1585 LR-HYYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1640
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1641 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1691
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-----------QSYKELTGTAWT------ 632
DD +FNF + N M+ LF + W + K+ G++
Sbjct: 1692 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPGSSVKGDCGNP 1749
Query: 633 ---LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1750 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1794
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YGF+ Y+ + DFL+ V ++ T
Sbjct: 1234 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLT--- 1290
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1291 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1347
Query: 560 QCIYCSLGVQIFGG-----------------IVN---AGNAKLEETDLADDDYLLFNFND 599
I+ +GV +F G +VN A +E A + NF++
Sbjct: 1348 WLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECQALIESNQTARWKNVKVNFDN 1407
Query: 600 YPNGMVTLFNLLVMGNWQVWMQS---------YKELTGTAWTLAYFVSFYLITVLLLLNL 650
G ++L + W M + + + YFV F + LNL
Sbjct: 1408 VGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNL 1467
Query: 651 VIAFVLEAF 659
I +++ F
Sbjct: 1468 FIGVIIDNF 1476
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 39/257 (15%)
Query: 327 NKEQCIKLFEELNKYRTLPNISRE-EFELIFDELDDTHDFKINLDEFADLCNAIALRFQK 385
+ E K +L ++LP I + E++ + L+D + IN F L A+
Sbjct: 45 DDENGPKPNSDLEAGKSLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAI---- 100
Query: 386 EDVPSCFENLPSIY-HSPFSEKLKAFIR---STKFGYMISIILIVNLVAVIVETTLDIQE 441
S F ++Y +PF+ K I+ + F +I ++ N V + + D
Sbjct: 101 ----SRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMSNPPD--- 153
Query: 442 SSLQSVW-QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGET 496
W + VE+ F IY E +KI + GF + R+ N DF V + E
Sbjct: 154 ------WTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEF 207
Query: 497 ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTI 556
+ L N +R + R L+ I ++ ++ G + + + +M + T+
Sbjct: 208 VNLG---------NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTV 256
Query: 557 FCVQCIYCSLGVQIFGG 573
FC+ ++ +G+Q+F G
Sbjct: 257 FCLS-VFALIGLQLFMG 272
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 420 ISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRD 478
I+I +++N + + +E + Q SS+ SV VF I+ EM LKI + Y+++
Sbjct: 765 ITICIVLNTLFMAMEHYPMTEQFSSVLSVGN---LVFTGIFTAEMFLKIIAMDPYYYFQE 821
Query: 479 GQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRG 537
G N FD F+V+ ++ + LA+ G + L + +R LA+ + +L+ +
Sbjct: 822 GWNIFDGFIVSLSLM---ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV 878
Query: 538 FVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNF 597
LTL+ +++ + I+ +G+Q+FG K+ D + ++
Sbjct: 879 GALGNLTLVLAIIVF---------IFAVVGMQLFGKSYKECVCKISN----DCELPRWHM 925
Query: 598 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLI 642
+ + + + +F +L G W M E+ G L F+ +I
Sbjct: 926 HHFFHSFLIVFRVLC-GEWIETMWDCMEVAGQTMCLTVFMMVMVI 969
>sp|P56699|CAC1E_DIPOM Probable voltage-dependent R-type calcium channel subunit alpha-1E
OS=Diplobatis ommata PE=2 SV=1
Length = 2223
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 462
F ++ F+ S F Y I ++ +N V ++++ SV + + F + LE
Sbjct: 1418 FQYRVWQFVVSPSFEYTILTMIALNTVVLMMKH--HSPPPGFASVLKLMNIAFTITFTLE 1475
Query: 463 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
LKI ++GF NY+RD N FDF VT V I E I F++ + +L L R
Sbjct: 1476 CILKIIAFGFLNYFRDSWNVFDF-VTVVGSISEIIVTEC--NLKFVN----LSFLKLFRA 1528
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNAK 581
RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I +
Sbjct: 1529 ARLIKLLRQGITIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQLFGNIGLDDHTP 1587
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---QSYKELTGTAWTLA---- 634
+ + NF+ + N ++ LF +WQ M S KE GT
Sbjct: 1588 INRHN---------NFHTFFNALMLLFRSATGESWQEIMLACLSGKECEGTREPSCGTDV 1638
Query: 635 ---YFVSFYLITVLLLLNLVIAFVLEAF 659
YFVSF + L+LNL +A +++ F
Sbjct: 1639 AYFYFVSFIFLCSFLMLNLFVAVIMDNF 1666
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 49/276 (17%)
Query: 407 LKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE-----VEFVFGWIYVL 461
++ ++S F +++ ++ +N V V V D Q +W EF F ++
Sbjct: 483 IRHMVKSHAFYWIVLGLVALNTVCVAV-VHYD------QPLWLSNFLYYAEFTFLGLFSS 535
Query: 462 EMALKIYSYGFENYWRDGQNRFD--------FLVTWVIVIGETITLASPNGQTFLSNGEW 513
EM LK+Y G Y+ N FD F V W I+ ET S G
Sbjct: 536 EMFLKMYGCGPRLYFHSSFNCFDCGVIIGSIFDVVWTIIRPET------------SFG-- 581
Query: 514 IRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG 573
I L R+LR+ ++ + R V + ++ + S++ L +F ++ LG+Q+FGG
Sbjct: 582 ISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGG 641
Query: 574 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGT 629
N EE NF+ +P ++T+F +L +W M +S +
Sbjct: 642 QFN-----FEEGTPPT------NFDTFPAAIITVFQILTGEDWNEVMYNGIKSQGGVNSG 690
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMEL 665
W+ YF+ L LLN+ +A ++ EL
Sbjct: 691 MWSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL 726
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 416 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 472
F YMI +I N V + +E L + ++ + ++ E F I+ E +KI + GF
Sbjct: 104 FEYMILATIIANCVVLALEQHLPNGDKTPMAKSLEQTEPYFIGIFCFEAGIKIVALGFVF 163
Query: 473 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 530
+Y R+G N DF+V ++ T + +R L R+LR ++L+
Sbjct: 164 HKGSYLRNGWNVMDFIVVLSGLLATAATHFN------------LRTLRAVRVLRPLKLVS 211
Query: 531 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVN----AGNAKLEETD 586
+ + + + + + L+ +F ++ +G++ + G ++ +A EE D
Sbjct: 212 GIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYYGKLHRTCYTDDAAAEELD 271
Query: 587 LADDDYLLFNFNDYPNGMV----------------------TLFNLLVMGNWQVWMQSYK 624
L PNG V T+F + M W + +
Sbjct: 272 LQFPCGTQEPTRLCPNGTVCSYWIGPNDGITQFDNILFALLTVFQCITMEGWTTILYNTD 331
Query: 625 ELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 664
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 332 DALGAMWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 371
>sp|Q02485|CAC1S_RAT Voltage-dependent L-type calcium channel subunit alpha-1S
(Fragment) OS=Rattus norvegicus GN=Cacna1s PE=1 SV=1
Length = 1146
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 145/343 (42%), Gaps = 61/343 (17%)
Query: 354 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 413
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 353 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYVVTS 404
Query: 414 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 473
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 405 SYFEYLMFALIMLNTICLGMQHY--NQSEQMNHISDILNVAFTIIFTLEMILKLIAFKPR 462
Query: 474 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 515
Y+ D N FDFL IVIG I + T L++ E R
Sbjct: 463 GYFGDPWNVFDFL----IVIGSIIDVILSEIDTLLASSGGLYCLGGGCGNVDPDESARIS 518
Query: 516 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 572
+ L R++RLI+LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 519 SAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 577
Query: 573 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKE----- 625
I ++ + NF +P ++ LF WQ + SY +
Sbjct: 578 KIAMVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKRCDPE 628
Query: 626 ---------LTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 659
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 629 SDYAPGEEYACGTNFAYYYFISFYMLCAFLIINLFVAVIMDNF 671
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 129/296 (43%), Gaps = 45/296 (15%)
Query: 411 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSY 470
+ +T F I + ++++ A+ E + +S + + ++VF ++ +E+ LK+ +Y
Sbjct: 83 VNATWFTNFILLFILLSSAALAAEDPIR-ADSMRNQILEYFDYVFTAVFTVEIVLKMTTY 141
Query: 471 GF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLI 526
G ++ R+ N D LV V +I ++ L S S ++ L + R+LR +
Sbjct: 142 GAFLHKGSFCRNYFNILDLLVVAVSLI--SMGLES-------SAISVVKILRVLRVLRPL 192
Query: 527 RLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN--AKLEE 584
R + + + V I ++ + +Q ++ +GVQ+F G + N +K+ E
Sbjct: 193 RAINRAKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFYSCNDLSKMTE 252
Query: 585 TDL-------ADDD------------YLLFNFNDYPNGMVTLFNLLVMGNWQVWM----Q 621
+ D D + F+F++ + M++LF + W +
Sbjct: 253 EECRGYYYIYKDGDPTQIELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAID 312
Query: 622 SYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 672
S +E TG + +F+ + ++ ++N+ + FV+ F + E E + CE
Sbjct: 313 SNEEDTGPVYNNRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETE-YKNCE 367
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 38/286 (13%)
Query: 410 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 469
F+ F I I++ +N+V ++VET D Q + V + VF ++ E LK+ S
Sbjct: 1473 FVTRQVFDISIMILICLNMVTMMVET--DDQSKYMTLVLSRINLVFIVLFTGEFLLKLIS 1530
Query: 470 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 529
+ Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1531 LRYY-YFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1586
Query: 530 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 589
+ R + + +P+L +F V IY G+ F + + +
Sbjct: 1587 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KKEAGI 1637
Query: 590 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-------------------QSYKELTGT- 629
DD +FNF + N M+ LF + W + S K G
Sbjct: 1638 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDAIHPGSSVKGDCGNP 1695
Query: 630 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 675
+ + +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1696 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1740
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 440 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 499
Q +++++ + + VF +I++LEM LK +YGF+ Y+ + DFL+ V ++ +
Sbjct: 1183 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVS---LV 1239
Query: 500 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 559
A+ G + L + +R L R LR +R L + R V + IPS+M L
Sbjct: 1240 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1296
Query: 560 QCIYCSLGVQIFGG----IVNAGNAKL----EETDLADDDYL---------LFNFNDYPN 602
I+ +GV +F G VN + E + +D L NF++
Sbjct: 1297 WLIFSIMGVNLFAGKFYHCVNTTTGNMFEIKEVNNFSDCQALGKQARWKNVKVNFDNVGA 1356
Query: 603 GMVTLFNLLVMGNWQVWMQS------------YKELTGTAWTLAYFVSFYLITVLLLLNL 650
G + L + W M + Y+E + YFV F + LNL
Sbjct: 1357 GYLALLQVATFKGWMDIMYAAVDSRDVKLQPIYEE---NLYMYLYFVIFIIFGSFFTLNL 1413
Query: 651 VIAFVLEAF 659
I +++ F
Sbjct: 1414 FIGVIIDNF 1422
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 420 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 479
I+I +++N + + +E Q+ S SV VF I+ EM LKI + Y+++G
Sbjct: 717 ITICIVLNTLFMAMEHYPMTQQFS--SVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEG 774
Query: 480 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 539
N FD ++ + ++ + LA+ G + L + +R LA+ + +L+ +
Sbjct: 775 WNIFDGIIVSLSLM--ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGA 832
Query: 540 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 599
LTL+ +++ + I+ +G+Q+FG K+ D ++ ND
Sbjct: 833 LGNLTLVLAIIVF---------IFAVVGMQLFGKSYKECVCKIN----VDCKLPRWHMND 879
Query: 600 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 637
+ + + +F +L G W M E+ G L F+
Sbjct: 880 FFHSFLIVFRVLC-GEWIETMWDCMEVAGQTMCLIVFM 916
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 449 QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNG 504
+ VE+ F IY E +KI + GF + RD N DF V + + E + L
Sbjct: 155 KNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLG---- 210
Query: 505 QTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYC 564
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++
Sbjct: 211 -----NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFA 262
Query: 565 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMG-NWQ 617
+G+Q+F G + ++ +D A + FN + T N+ + NW+
Sbjct: 263 LIGLQLFMGNLRNKCSQWPPSDSAFETNTTSYFNGTMDSNGTFVNVTMSTFNWK 316
>sp|Q9EQ60|CAC1H_RAT Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus
norvegicus GN=Cacna1h PE=2 SV=2
Length = 2359
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 26/276 (9%)
Query: 403 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 462
FS KL+ + S F I ++VN +++ VE Q L + + VF ++ LE
Sbjct: 779 FSGKLRRIVDSKYFNRGIMAAILVNTLSMGVE--YHEQPEELTNALEISNIVFTSMFALE 836
Query: 463 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
M LK+ + G Y R+ N FD +V VI + E + A+ G + L +R L L R
Sbjct: 837 MLLKLLACGPLGYIRNPYNIFDGIVV-VISVWEIVGQAN-GGLSVLRTFRLLRVLKLVRF 894
Query: 523 L-RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 581
L L R L+ + + VATF L LM + IF I+ LG+ +FG +
Sbjct: 895 LPALRRQLVVLMRTMDNVATFCML---LMLF---IF----IFSILGMHLFGCKFSL---- 940
Query: 582 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTA-WTLAYFVSFY 640
+TD D NF+ +VT+F +L +W V + Y + T+ W YFV+
Sbjct: 941 --KTDSGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVL--YNGMASTSSWAALYFVALM 996
Query: 641 LITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDK 676
+L NL++A ++E F AE + S+ +EDK
Sbjct: 997 TFGNYVLFNLLVAILVEGFQAEGDATRSDT--DEDK 1030
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 25/268 (9%)
Query: 420 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 479
I+ I+ +N++ + +E Q SL + +VF ++V E ALK+ ++GF +++D
Sbjct: 1628 ITFIICLNVITMSMEHY--NQPKSLDEALKYCNYVFTIVFVFEAALKLVAFGFRRFFKDR 1685
Query: 480 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 539
N+ D + + ++G + N + N IR + + R+ R+++LL R +
Sbjct: 1686 WNQLDLAIVLLSIMGIALEEIEMNAALPI-NPTIIRIMRVLRIARVLKLLKMATGMRALL 1744
Query: 540 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 599
T + +P + + IY +LGV++FG + + E + + F +
Sbjct: 1745 DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRL------ECSEDNPCEGLSRHATFTN 1798
Query: 600 YPNGMVTLFNLLVMGNWQVWMQ-SYKELTG---------TAWTLAYFVSFYLITVLLLLN 649
+ +TLF + NW M+ + +E T A + YFV+F L+ +L+N
Sbjct: 1799 FGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPALSPVYFVTFMLVAQFVLVN 1858
Query: 650 LVIAFVLEAFFAEMELESSEKCEEEDKD 677
+V+A +++ LE S K ED +
Sbjct: 1859 VVVAVLMK------HLEESNKEAREDAE 1880
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 408 KAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFGWIYVLEMALK 466
+ I F +++ + + +N + + +E DI S + + V ++F I+V+EM +K
Sbjct: 1299 QKVIAHKMFDHVVLVFIFLNCITIALERP-DIDPGSTERAFLSVSNYIFTAIFVVEMMVK 1357
Query: 467 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 522
+ + G Y + N D L+ V ++ + +AS G L L + R+
Sbjct: 1358 VVALGLLWGEHAYLQSSWNVLDGLLVLVSLVDIIVAMASAGGAKILG------VLRVLRL 1411
Query: 523 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGVQIFGGI---- 574
LR +R L + + G TLI SL P +G I + C I+ LGVQ+F G
Sbjct: 1412 LRTLRPLRVISRAPGLKLVVETLISSLRP-IGNIVLICCAFFIIFGILGVQLFKGKFYYC 1470
Query: 575 --VNAGNAKLE-ETDLADDDYLL--FNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTG- 628
+ N + E A ++ +NF++ +++LF L W M + G
Sbjct: 1471 EGTDTRNITTKAECHAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGI 1530
Query: 629 --------TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 660
W L YF+SF LI +LN+ + V+E F
Sbjct: 1531 DQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFH 1570
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 261,005,494
Number of Sequences: 539616
Number of extensions: 11243344
Number of successful extensions: 44909
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 43731
Number of HSP's gapped (non-prelim): 725
length of query: 714
length of database: 191,569,459
effective HSP length: 125
effective length of query: 589
effective length of database: 124,117,459
effective search space: 73105183351
effective search space used: 73105183351
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)